BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5892
(340 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328713829|ref|XP_001950141.2| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Acyrthosiphon pisum]
Length = 443
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/338 (55%), Positives = 259/338 (76%), Gaps = 7/338 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACGYGFTV A +S KLFGCGLN+DSQ+GYHDPRK G PL L+++ V I LP
Sbjct: 91 KIKDLACGYGFTVYAVESN--QYKLFGCGLNTDSQIGYHDPRK-GYPLGLILATVPIQLP 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+K P+T+IK +A GRAHT+V+T+ EG + G+N +GQCGR I++ ED+ +NI
Sbjct: 148 LKEPNTKIKAVAAGRAHTLVLTNTEGVYALGSNCYGQCGRKIIENEDFSKLRNVNNITLD 207
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G I +CGQDH+LF+T++GKVYSCGWGADGQTGLGH NN+ P +V G+I+GE+IVK
Sbjct: 208 DG--ISKIICGQDHSLFITKAGKVYSCGWGADGQTGLGHYNNESQPTIVEGDIKGEKIVK 265
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ S+ DCVLA++D+G+VFGWGNSEYGQ+ + Q++ PR L KG+ +I D+ + GS
Sbjct: 266 VVSSADCVLALNDQGEVFGWGNSEYGQLLLDSDKYQVNKPRKLPLSKGMGKITDIGATGS 325
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
AC LNDEG+V+ WG+G+LG+GP++++S +PT IPS LFG++Q+NP+++V+S+ +
Sbjct: 326 ACIALNDEGVVFVWGFGILGKGPEMNQSREPTPIPSILFGRNQYNPETRVKSVYSSVFHM 385
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
AIT+ G+LY WGKN++GQLGLG +DQ FPL+V+VG
Sbjct: 386 AAITSEGNLYTWGKNKWGQLGLGHTKDQYFPLQVSVGA 423
>gi|262091810|gb|ACY25397.1| CG3862-PA-like protein [Plutella xylostella]
Length = 431
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/339 (54%), Positives = 245/339 (72%), Gaps = 5/339 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T+IACGYGFTV + K+ D+ K+FG G+N+DSQ+GYH PR G+PLE+++S I +P
Sbjct: 76 VTEIACGYGFTVASIKT-DEQHKVFGTGINTDSQIGYHAPRM-GHPLEILLSPAPIYIPY 133
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K TQ+ L GRAHT+V+TDNEG +T GNN++GQCGR I E+++G HNI L
Sbjct: 134 KSLETQVIGLDAGRAHTLVLTDNEGVYTLGNNAYGQCGRKINPNEEHRGSMVSHNIKSLG 193
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
EKI CGQDH+LF+TESGKVY+CGWGADGQTGLGH +NQ P V+G+I ER+VK+
Sbjct: 194 KEKITSVCCGQDHSLFVTESGKVYACGWGADGQTGLGHYDNQAIPAQVKGDITSERVVKV 253
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQ-CKGVSRIVDVASGGS 240
+S DCVLA+++ G++FGWGNSEYGQ+ ++++ Q++ L KG+ RIVD+ASGGS
Sbjct: 254 ASTGDCVLALNEHGELFGWGNSEYGQVPMAKTQQQVNMSYALVNFTKGLGRIVDIASGGS 313
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C + N+ G V+ WGYGLLG GP V + KP IP LFG+++FNP+ V+ + G
Sbjct: 314 FCMIANEHGDVFVWGYGLLGLGPNVQHADKPKQIPPALFGRNEFNPECMVQKVACGIGHL 373
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
AITN G LYMWG+N++G LGLG +DQ FPL+VAVG
Sbjct: 374 AAITNNGDLYMWGRNRHGCLGLGNSKDQNFPLRVAVGAH 412
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGC-GLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+I DIA G F ++A + D + +G GL + Q H + K P L F R
Sbjct: 304 RIVDIASGGSFCMIANEHGDVFVWGYGLLGLGPNVQ---HADKPKQIPPAL---FGRNEF 357
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+P ++ +A G H IT+N + +G N G G G +++++ +
Sbjct: 358 ---NPECMVQKVACGIGHLAAITNNGDLYMWGRNRHGCLGLGNSKDQNFP-------LRV 407
Query: 122 LEGEKIMDAVCGQDHTLFL 140
G ++ VC DHTL +
Sbjct: 408 AVGAHVLKVVCSVDHTLAM 426
>gi|357608659|gb|EHJ66084.1| hypothetical protein KGM_00601 [Danaus plexippus]
Length = 388
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 246/339 (72%), Gaps = 5/339 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T+IACGYGFTV A K+K+++ K+FG G+N+DSQ+GYH PR G+PLE+++S I +P
Sbjct: 33 VTNIACGYGFTVAAVKTKEQH-KVFGTGINTDSQIGYHAPRM-GHPLEMLVSPAPIFIPY 90
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
T+I LA GRAHT+++TDNEG FT GNN++GQCGR I +E+Y+G HNI L
Sbjct: 91 ASLETKITGLAAGRAHTVILTDNEGVFTLGNNAYGQCGRKINPQEEYKGSMVSHNIKHLG 150
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
E I CGQDH+LF+TESGKVY+CGWGADGQTGLG NQ P V+G+I E IVK+
Sbjct: 151 KENIKSVCCGQDHSLFITESGKVYACGWGADGQTGLGIYENQGFPARVKGDITSENIVKV 210
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+S DCVLA+SD+G++FGWGNSEYGQ+ + + Q++ + +L+ KG+ +IVD+A+GGS
Sbjct: 211 ASTADCVLALSDRGELFGWGNSEYGQVPMNTKQQQVNMSYALLNFTKGLGKIVDIAAGGS 270
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C + ND+G V+ WG+GLLG GP V + KPT IP+ LFG+++FNP+ V + G
Sbjct: 271 FCLICNDQGDVFVWGFGLLGLGPNVQHTNKPTQIPAPLFGRNEFNPECMVTKVACGIGHL 330
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
AITN G LY+WG+N+YG LGLG DQ FPLK+ +G
Sbjct: 331 AAITNSGDLYVWGRNRYGCLGLGHQNDQHFPLKIGIGAH 369
>gi|321478161|gb|EFX89119.1| hypothetical protein DAPPUDRAFT_304656 [Daphnia pulex]
Length = 454
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 178/338 (52%), Positives = 239/338 (70%), Gaps = 7/338 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++TDIA GYGFTV A KSK + +LFG GLN+DSQ+GYH RK +PLEL++ V I LP
Sbjct: 102 EVTDIAAGYGFTVFAAKSKKSSSQLFGTGLNTDSQIGYHSVRKD-HPLELIVEPVPIHLP 160
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H T + +A GRAHT+V+T T G+N +GQCGR IV+ EDYQ + H I
Sbjct: 161 --HDKTSVAGVACGRAHTLVLTGKSEVLTLGHNGYGQCGRHIVENEDYQRQSTVHTIRI- 217
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EKI CGQDH++F+++ G V++CGW ADGQTGLGH NN + G+I GE+++K
Sbjct: 218 -DEKISQVACGQDHSMFISDQGSVWACGWSADGQTGLGHYNNTDRISKCVGDIVGEKVIK 276
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++S+ DCVLA++DKG VFGWGNSEYGQ+ + SEMQ+ TPR L + +IVDVA+ G+
Sbjct: 277 VTSSADCVLALNDKGQVFGWGNSEYGQLRLATSEMQLHTPRHLPLPSSLGKIVDVATTGT 336
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
AC +LND G V+ WGYG+LG+GP V RS +PT IP TLFG ++FN + KV S+ G F
Sbjct: 337 ACLILNDAGEVFVWGYGILGKGPVVDRSQEPTAIPLTLFGCNEFNSEIKVTSVYGGLSQF 396
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
A+TN G LY+WG+N++G LGLG + +Q FP+K+++ G
Sbjct: 397 AAVTNTGDLYIWGRNRFGSLGLGHLHNQFFPIKISIPG 434
>gi|345494702|ref|XP_001604296.2| PREDICTED: LOW QUALITY PROTEIN: Williams-Beuren syndrome
chromosomal region 16 protein homolog [Nasonia
vitripennis]
Length = 449
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 228/337 (67%), Gaps = 5/337 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+TD+ACGYGFT K+KD + L+G G+NSDSQLGYH P+ +V I +P+
Sbjct: 96 VTDVACGYGFTAFGVKAKDHRI-LYGTGINSDSQLGYH-PKDDKLKSPVVREPRPIFIPL 153
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + I L+ GRAH +V+TD EG +T GNN +GQCGR I+ EDY + I D++
Sbjct: 154 KGKTANILGLSAGRAHLLVLTD-EGLYTLGNNGYGQCGRPIINNEDYLKSKVVNYIPDIK 212
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G KI GQDH++ +TE+G+VYS GWGADGQTGL H +N+ P LV+G++ GE I+K+
Sbjct: 213 GTKIKSVTAGQDHSMLVTENGEVYSFGWGADGQTGLAHYHNEYRPSLVKGDLSGENIIKV 272
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ DC LA+SDKG VFGWGN+EY Q+ QI+ L C + I+D+ASGGS
Sbjct: 273 ACTADCALALSDKGKVFGWGNAEYSQLPAQSDSQQINIATQLKSCNDLGNIIDIASGGSF 332
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
C +LN EG VY WG+G+LG GP+V + +KPTL+P TLFG + + P +KV + G G
Sbjct: 333 CMVLNSEGEVYVWGFGILGLGPQVQKVLKPTLVPKTLFGINPYEPDTKVVKIFCGISQLG 392
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
AITN GHLYMWG+NQYG LGLG +DQ FPL+V++GG
Sbjct: 393 AITNAGHLYMWGRNQYGGLGLGNYKDQFFPLRVSIGG 429
>gi|332024532|gb|EGI64730.1| Williams-Beuren syndrome chromosomal region 16 protein-like protein
[Acromyrmex echinatior]
Length = 440
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 239/341 (70%), Gaps = 12/341 (3%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP-- 60
++ DIACGYGFT A S DKN+ ++G G+N+DSQLGY+ K N M F+ P
Sbjct: 89 RVIDIACGYGFTAYAVHSSDKNI-VYGSGINTDSQLGYNLDEKFLN-----MIFIPKPIT 142
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
LP+++ ST+I +A GRAH +++T EG FT GNN++GQCGR I+ E+Y+ H+I
Sbjct: 143 LPLQNASTKIIGMAAGRAHLLILT-TEGLFTLGNNAYGQCGRSIILNENYEKSTAVHHIP 201
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D++G KI+ GQDH++ LTE+G+VY+ GWGADGQTGL H N+ P LV+G++ G+RI
Sbjct: 202 DIKGNKIVAVTAGQDHSILLTETGEVYTFGWGADGQTGLAHYQNEHRPSLVKGDLAGQRI 261
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG 238
VK++ A DCVLA+SDKG V+GWGNSEY Q+S E Q++ L + + I+D+A+G
Sbjct: 262 VKVACAADCVLALSDKGKVYGWGNSEYNQLSVREDNYQVNIATEL-YTQELGYIIDIAAG 320
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G C +LN++G V+ WGYG+LG GP+V R +KPT+IPSTLFG + +N KV ++ G
Sbjct: 321 GCFCMVLNNDGNVFVWGYGILGFGPQVQRVLKPTMIPSTLFGNNVYNRNVKVTNIYCGIN 380
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G LYMWG N++G LGLG V+DQ FPLKVAVG Q
Sbjct: 381 QLAALTNTGDLYMWGCNRFGSLGLGHVKDQFFPLKVAVGAQ 421
>gi|383864560|ref|XP_003707746.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Megachile rotundata]
Length = 443
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T+I CGYGFT A +SKDKN+ L+G G+N+DSQLG+ + KK +L+ I LP+
Sbjct: 90 VTNICCGYGFTAFAVRSKDKNI-LYGSGINTDSQLGFDESDKKFLD-DLITEPRPIDLPL 147
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K ST+I +A GRAH +++T +EG FT GNNS+GQCGR I+ +E+Y+ H+I+D++
Sbjct: 148 KDSSTKITDMAAGRAHLLILT-SEGLFTLGNNSYGQCGRPIILDENYKKSKVVHHISDIK 206
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G+KI GQDH++ LTESG+VY+ GWGADGQTGL H N+ P LV+G++ G+ I+K+
Sbjct: 207 GKKIKAVTAGQDHSILLTESGEVYTFGWGADGQTGLAHYRNEYRPSLVKGDLAGQHIIKV 266
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ DCVLA+SDKG VFGWGNSEYGQ+ Q++ L+ + V + D+ASGG
Sbjct: 267 ACIADCVLALSDKGKVFGWGNSEYGQLFTHGENQQVNIATELTALEDVGHVKDIASGGCF 326
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
C +LN G VY WGYG+LG GP+V R M+PTLIPS LFG++ + +KV + G
Sbjct: 327 CMVLNSAGDVYVWGYGILGLGPEVKRIMQPTLIPSVLFGRNAYVKDAKVMKIFCGTSHLA 386
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+ N G LYMWG N++G LGLG +DQ FPLKV VG Q
Sbjct: 387 ALNNLGDLYMWGCNKFGSLGLGHTKDQYFPLKVNVGAQ 424
>gi|66519286|ref|XP_395025.2| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Apis mellifera]
Length = 443
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T+IACGYGFT A +S DKN+ LFG G+N+DSQLG+ D + K P L+ I LP+
Sbjct: 90 VTNIACGYGFTAFAVRSNDKNI-LFGSGINTDSQLGF-DEKDKKFPNGLITEPRPINLPI 147
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K ST++ +A GRAH +V+T NEG FT GNN++GQCGR I+ E+Y+ H+I ++
Sbjct: 148 KDSSTKVLDIAAGRAHLLVLT-NEGLFTLGNNAYGQCGRPIILNENYEKSTVIHHIPSIK 206
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G+KI GQDH++ LTESG+VY+ GWGADGQTGL H N+ P LV+G++ G+ I+K+
Sbjct: 207 GKKIKSITAGQDHSILLTESGEVYTFGWGADGQTGLAHYRNEYRPSLVKGDLAGQHIIKV 266
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ DCVLA+SDKG VFGWGNSEY Q + + Q++ + + K + IVD+A GG
Sbjct: 267 ACVADCVLALSDKGKVFGWGNSEYAQLFVEDGNQQVNIATEIDKLKHLGHIVDIACGGCF 326
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
C +LN+ G VY WG+G+LG GPK+++ ++PTLIP+TLFG + + +KV + G
Sbjct: 327 CMVLNNTGDVYVWGFGILGFGPKITKIVQPTLIPATLFGNNAYQKNTKVIKIFCGMNHLA 386
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G LYMWG N++G LGLG +DQ FPLKV VG Q
Sbjct: 387 ALTNTGDLYMWGCNKFGSLGLGDCKDQYFPLKVNVGAQ 424
>gi|350406684|ref|XP_003487848.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Bombus impatiens]
Length = 443
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 173/339 (51%), Positives = 233/339 (68%), Gaps = 5/339 (1%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ DI CGYGFT A KSKDKN+ L+G G+N+DSQLG+++ KK P L+ I LP
Sbjct: 89 EVMDITCGYGFTAFAVKSKDKNI-LYGSGINTDSQLGFNEKDKKF-PNGLITEPRPINLP 146
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+K ST++ ++ GRAH +V+T NEG FT GNN++GQCGR I+ E+Y+ H+I ++
Sbjct: 147 IKDSSTKVLDMSAGRAHLLVLT-NEGVFTLGNNAYGQCGRPIILNENYENSRVVHHIPNI 205
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ +KI GQDH++ LTESG+VY+ GWGADGQTGL H N+ P LV+G++ G+ I+K
Sbjct: 206 KEKKIKAVTAGQDHSILLTESGEVYTFGWGADGQTGLAHYRNEHRPSLVKGDLAGQHIIK 265
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQ-ISESE-MQISTPRVLSQCKGVSRIVDVASGGS 240
++ DCVLA+SDKG+VFGWGNSEY Q + E E QI+ LS K + IVD+A GG
Sbjct: 266 VACVADCVLALSDKGNVFGWGNSEYAQLLMEGENQQINIATELSALKKLGHIVDIACGGC 325
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C +LN+ G VY WGYG+LG GP+V +S +P IPS LFG + + +KV + G
Sbjct: 326 FCMILNNTGEVYVWGYGILGFGPEVKKSQQPIKIPSVLFGNNAYQKNTKVVKIFCGMSHL 385
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G LYMWG N++G LGLG ++DQ FPLKV VG Q
Sbjct: 386 AALTNTGDLYMWGCNKFGSLGLGDLKDQYFPLKVTVGAQ 424
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 123 EGEKIMDAVCGQDHTLFLTESGK---VYSCGWGADGQTGLGH--------LNNQETPCLV 171
E ++MD CG T F +S +Y G D Q G L + P +
Sbjct: 86 EKHEVMDITCGYGFTAFAVKSKDKNILYGSGINTDSQLGFNEKDKKFPNGLITEPRPINL 145
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQCKG 228
+ +++ +S+ +L ++++G VF GN+ YGQ + RV+
Sbjct: 146 PIKDSSTKVLDMSAGRAHLLVLTNEG-VFTLGNNAYGQCGRPIILNENYENSRVVHHIPN 204
Query: 229 V--SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVSRSMKPTLIPSTLFGQHQF 284
+ +I V +G +L + G VY++G+G GQ +P+L+ L GQH
Sbjct: 205 IKEKKIKAVTAGQDHSILLTESGEVYTFGWGADGQTGLAHYRNEHRPSLVKGDLAGQHI- 263
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
++ C A+++ G+++ WG ++Y QL
Sbjct: 264 -----IKVACVADCVL-ALSDKGNVFGWGNSEYAQL 293
>gi|340721370|ref|XP_003399094.1| PREDICTED: LOW QUALITY PROTEIN: Williams-Beuren syndrome
chromosomal region 16 protein homolog [Bombus
terrestris]
Length = 443
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+TDI CGYGFT A +SKDKN+ L+G G+N+DSQLG+++ KK P L+ I LP+
Sbjct: 90 VTDITCGYGFTAFAVRSKDKNI-LYGSGINTDSQLGFNEKDKKF-PNGLITEPRPINLPI 147
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K ST++ ++ GRAH +V+T NEG FT GNN++GQCGR I+ E+Y+ H+I ++
Sbjct: 148 KDSSTKVLDMSAGRAHLLVLT-NEGLFTLGNNAYGQCGRPIILNENYEKSRVVHHIPNIX 206
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G+KI GQDH++ LTESG+VY+ GWGADGQTGL H N+ P LV+G++ G+ I+K+
Sbjct: 207 GKKIKAVTAGQDHSILLTESGEVYTFGWGADGQTGLAHYRNEYRPSLVKGDLAGQHIIKV 266
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ-ISESE-MQISTPRVLSQCKGVSRIVDVASGGSA 241
+ DCVLA+SDKG+VFGWGNSEY Q + E E QI+ LS K + IVD+A GG
Sbjct: 267 ACVADCVLALSDKGNVFGWGNSEYAQLLMEGENQQINIATELSALKKLGHIVDIACGGCF 326
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
C +LN+ G +Y WGYG+LG GP+V +S +P IPS LFG + + +KV + G
Sbjct: 327 CMVLNNTGEIYVWGYGILGFGPEVKKSQQPIKIPSVLFGNNAYQKNTKVVKIFCGMSHLA 386
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G LYMWG N++G LGLG ++DQ FPLKV VG Q
Sbjct: 387 ALTNTGDLYMWGCNKFGSLGLGDLKDQYFPLKVTVGAQ 424
>gi|380015821|ref|XP_003691893.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Apis florea]
Length = 443
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T+IACGYGFT A +S DKN+ L+G G+N+DSQLG+ D + K P L+ I LP+
Sbjct: 90 VTNIACGYGFTAFAVRSNDKNI-LYGSGINTDSQLGF-DEKDKKFPNGLITEPRPINLPI 147
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K ST++ +A GRAH +V+T NEG FT GNN++GQCGR I+ E+Y+ H+I ++
Sbjct: 148 KDSSTKVLDIAAGRAHLLVLT-NEGLFTLGNNAYGQCGRPIILNENYEKSTVIHHIPSIK 206
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G+KI GQDH++ LTESG+VY+ GWGADGQTGL H N+ P LV+G++ G+ I+K+
Sbjct: 207 GKKIKSITAGQDHSILLTESGEVYTFGWGADGQTGLAHYRNEYRPSLVKGDLAGQHIIKV 266
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ DCVLA+SDKG VFGWGNSEY Q + + Q++ + + K + IVD+A GG
Sbjct: 267 ACVADCVLALSDKGKVFGWGNSEYAQLFVEDGNQQVNIATEIDKLKHLGHIVDIACGGCF 326
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
C +LN+ G VY WG+G+LG GPK+++ ++PTLIP+TLFG + + +KV + G
Sbjct: 327 CMVLNNTGDVYVWGFGILGFGPKITKIVQPTLIPATLFGNNAYQKNTKVIKIFCGMNHLA 386
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G LYMWG N++G LGLG +DQ FPLKV VG Q
Sbjct: 387 ALTNTGDLYMWGCNKFGSLGLGDCKDQYFPLKVNVGAQ 424
>gi|307203968|gb|EFN82875.1| Williams-Beuren syndrome chromosomal region 16 protein-like protein
[Harpegnathos saltator]
Length = 441
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 232/339 (68%), Gaps = 5/339 (1%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ DIACGYGFTV A S DKN+ ++G G+N+DSQLG+ K P LV I LP
Sbjct: 87 KVVDIACGYGFTVYAVHSSDKNI-IYGTGINTDSQLGFSTTNNKF-PNNLVFLPRPINLP 144
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ T++ +A GRAH +++T EG FT GNNS+GQCGR I+ E+Y+ H+I ++
Sbjct: 145 LQDDKTKVLGMAAGRAHLLILT-TEGLFTLGNNSYGQCGRPIIMSENYEKSLTIHHIPNI 203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G KI GQDH++ LTE+G+VY+ GWGADGQTGL H N+ P LV+G++ G+RI+K
Sbjct: 204 NGRKITAVTAGQDHSMLLTETGEVYTFGWGADGQTGLAHYRNEYQPSLVKGDLAGQRIIK 263
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGS 240
++ DCVLA+SDKG VFGWGNSEYGQ+S ++ QI+ L + + IVD+A+GG
Sbjct: 264 VACVADCVLALSDKGKVFGWGNSEYGQLSTKDINHQINIATELDMFQDLGHIVDIAAGGC 323
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C +LND G VY WGYG+LG GP+V + KP IPSTLFG++ +N KV ++ G
Sbjct: 324 FCMVLNDAGNVYVWGYGILGFGPEVEKISKPKQIPSTLFGKNIYNRDVKVTNINCGINQL 383
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G L+MWG N++G LGLG ++DQ FPL+V+VG Q
Sbjct: 384 AALTNSGDLFMWGVNKFGCLGLGHIKDQFFPLRVSVGAQ 422
>gi|307188168|gb|EFN73000.1| Williams-Beuren syndrome chromosomal region 16 protein-like protein
[Camponotus floridanus]
Length = 444
Score = 343 bits (879), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 168/340 (49%), Positives = 233/340 (68%), Gaps = 5/340 (1%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+TDIACGYGFTV A +S DKN+ ++G G+N+DSQLG+++ KK P +V + I LP
Sbjct: 88 KVTDIACGYGFTVYAVQSSDKNI-VYGTGINTDSQLGFNEIDKKKFPDNMVFAPRPINLP 146
Query: 63 VK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K + +T++ +A GRAH +++T EG FT GNN++GQCGR I+ E+Y+ H+I +
Sbjct: 147 LKENTTTKVIGMAAGRAHLLILT-MEGLFTLGNNAYGQCGRPIIANENYEKSRVVHHIPN 205
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
++G KI GQDH++ LTE G+VY+ GWGADGQTGL H N+ P LV+G++ G+ I+
Sbjct: 206 IKGSKITAVAAGQDHSILLTEVGEVYAFGWGADGQTGLAHYRNEHRPSLVKGDLAGQHII 265
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
K++ DCVLA+SDKG V+GWGNSEYGQ+S Q+ L+ + + I D+A+GG
Sbjct: 266 KVACIADCVLALSDKGKVYGWGNSEYGQLSVKGDSCQVYIATELNLPEEIGHITDIATGG 325
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
C +LN G +Y WGYG+LG GP+V + +KPT+IP TLFG + +N KV + G
Sbjct: 326 CFCMILNSAGNIYVWGYGILGLGPQVQKILKPTMIPPTLFGNNVYNRDIKVTKIYCGISQ 385
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G LYMWG N++G LGLG DQ FPL+VAVG Q
Sbjct: 386 LAALTNSGDLYMWGGNKFGSLGLGHRNDQFFPLRVAVGAQ 425
>gi|242020879|ref|XP_002430878.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Pediculus humanus corporis]
gi|212516089|gb|EEB18140.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Pediculus humanus corporis]
Length = 409
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/368 (48%), Positives = 243/368 (66%), Gaps = 32/368 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG-------YHDPRK---------- 45
K+ D+ GYGF+V K+ + N ++FG GLN+DSQ+G +H RK
Sbjct: 25 KVIDVTAGYGFSVFVLKNYNAN-QVFGTGLNTDSQIGMVYFTSPFHCLRKTVKLKLSIFL 83
Query: 46 --------KGNPLELVMSFVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNS 96
P+ ++ + V I L +K+P+ T++K ++ GRAH V+TD EG FT GNN+
Sbjct: 84 TKGYQSSRHNAPMGILTAPVPINLGLKNPTKTKVKAISAGRAHLAVVTDLEGVFTLGNNA 143
Query: 97 FGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
+GQCGR IV+ E+Y G H I E + ++ CGQDHTL LT+SGKVYSCGWGADGQ
Sbjct: 144 YGQCGRRIVENEEYFGSRIVHRIHHFENDPFVNVECGQDHTLLLTQSGKVYSCGWGADGQ 203
Query: 157 TGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SES 213
TGLGH N+++ V G+IE E+IVK+SS DCVLA++DKGDVFGWGNSEYGQ+ ++S
Sbjct: 204 TGLGHYNSEQNLKRVSGDIENEKIVKISSKCDCVLAINDKGDVFGWGNSEYGQLCDRTDS 263
Query: 214 EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
QI+TP + +C+G +IVDVA+ GS C MLN+ G V++WG+G+LG+GP S+S +P +
Sbjct: 264 YTQINTPLHMKKCEGFGKIVDVAAAGSFCMMLNEIGEVFTWGFGILGRGPNASQSFQPEV 323
Query: 274 IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL--GTVEDQPFP 331
IPS LFG++ F S+V S+ G GAI N+G +YMWGKNQ LGL DQ FP
Sbjct: 324 IPSILFGRNDFQKDSRVVSVHCGVHYCGAINNYGEIYMWGKNQENCLGLMINNNADQFFP 383
Query: 332 LKVAVGGQ 339
L+V + G+
Sbjct: 384 LRVCLPGK 391
>gi|198474556|ref|XP_001356744.2| GA17737 [Drosophila pseudoobscura pseudoobscura]
gi|198138441|gb|EAL33809.2| GA17737 [Drosophila pseudoobscura pseudoobscura]
Length = 458
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 238/353 (67%), Gaps = 20/353 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFT A + D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 91 EITDVAAGYGFTAYAVQRSDGE-TLFGSGLNTDSQLGF---QVKGNPKDPANLDVIIYPT 146
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP +H T Q++ +A GRAH +V+T N FT GNNS+GQCGR I+ +E Y
Sbjct: 147 AIRLPREHGETDEDMQVRSMAAGRAHLVVVTRNGTVFTLGNNSYGQCGRSIIDDERYSKS 206
Query: 114 WFCHNIA--DLEGEK--IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H IA D+ GEK I+ CGQDHT+FLT+ G+VY+CGWGADGQTG G+ +
Sbjct: 207 ALIHRIAQADICGEKDEIVSVECGQDHTMFLTKLGRVYTCGWGADGQTGQGNYHTAGQIT 266
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE---MQISTPRVLSQC 226
L+ G+IE ERIV+L+S+ DCVLA++++GDVFGWGNSEYGQ+ +SE QI+TPR L
Sbjct: 267 LIGGDIEKERIVRLTSSSDCVLALNERGDVFGWGNSEYGQLDDSEHAQTQINTPRALQLT 326
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
KG+ I DVA+GGS C LND+GLVY+WGYG+LG GP V ++ KP + LFG++ F+
Sbjct: 327 KGIGVIKDVAAGGSFCMALNDQGLVYTWGYGILGFGPFVEQTSKPQHLLPPLFGRNDFSN 386
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+ V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 387 ATTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 439
>gi|195148160|ref|XP_002015042.1| GL18631 [Drosophila persimilis]
gi|194106995|gb|EDW29038.1| GL18631 [Drosophila persimilis]
Length = 458
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 238/353 (67%), Gaps = 20/353 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFT A + D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 91 EITDVAAGYGFTAYAVQRSDGE-TLFGSGLNTDSQLGF---QVKGNPKDPANLDVIIYPT 146
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP ++ T Q++ +A GRAH +V+T N FT GNNS+GQCGR I+ +E Y
Sbjct: 147 AIRLPRENGETDEDMQVRSMAAGRAHLVVVTRNGTVFTLGNNSYGQCGRSIIDDERYSKS 206
Query: 114 WFCHNIA--DLEGEK--IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H IA D+ GEK I+ CGQDHT+FLT+ G+VY+CGWGADGQTG G+ +
Sbjct: 207 ALIHRIAQADICGEKDEIVSVECGQDHTMFLTKLGRVYTCGWGADGQTGQGNYHTAGQIT 266
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE---MQISTPRVLSQC 226
L+ G+IE ERIV+L+S+ DCVLA++++GDVFGWGNSEYGQ+ +SE QI+TPR L
Sbjct: 267 LIGGDIEKERIVRLTSSSDCVLALNERGDVFGWGNSEYGQLDDSEHAQTQINTPRALQLT 326
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
KG+ I DVA+GGS C LND+GLVY+WGYG+LG GP V ++ KP + LFG++ F+
Sbjct: 327 KGIGLIKDVAAGGSFCMALNDQGLVYTWGYGILGFGPFVEQTSKPQHLLPPLFGRNDFSN 386
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+ V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 387 ATTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 439
>gi|157820323|ref|NP_001101802.1| Williams-Beuren syndrome chromosome region 16 homolog [Rattus
norvegicus]
gi|149063123|gb|EDM13446.1| Williams-Beuren syndrome chromosome region 16 homolog (human)
(predicted) [Rattus norvegicus]
Length = 461
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 166/341 (48%), Positives = 232/341 (68%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 105 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 163
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNN+ GQCGR +V++E Y H +
Sbjct: 164 PLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D EG+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 224 DFEGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LA+S G VFGWGNSEY Q++ Q++ PR L GV ++ VA G
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG 341
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN+EG V+ WGYG+LG+GP +S + P +IP TLFG +FNP+ KV + G
Sbjct: 342 GTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLS 401
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 402 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
>gi|91089971|ref|XP_973774.1| PREDICTED: similar to regulator of chromosome condensation
[Tribolium castaneum]
gi|270013683|gb|EFA10131.1| hypothetical protein TcasGA2_TC012311 [Tribolium castaneum]
Length = 477
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/340 (49%), Positives = 233/340 (68%), Gaps = 11/340 (3%)
Query: 4 ITDIACGYGFTV--VATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+T ACG+GFT V T+S+DK L+G GLN+DSQ+G H+ R+ G+PLE++ I L
Sbjct: 124 VTTAACGFGFTAFGVDTESEDK---LYGTGLNTDSQIGRHEVRQ-GHPLEIIYFPQAIKL 179
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+K+P+ T+I+ LA GRAH +V+TD EG F GNN++GQCGR I+Q+E+Y + ++I
Sbjct: 180 PLKNPTKTRIRKLAAGRAHLVVLTD-EGLFLLGNNAYGQCGREIIQDENYFLSNYINHIP 238
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D++ +K+ D CGQDHTL +T+ G VYSCGWGADGQTGLG +N + GEIE E+I
Sbjct: 239 DIDSKKVTDIECGQDHTLAVTDDGAVYSCGWGADGQTGLGTFDNTSAFTRITGEIESEKI 298
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG 238
VK+SS D LA++D+G+VFGWGN+EY QI +E Q+S P L K V ++VDVA+G
Sbjct: 299 VKISSRSDFALALNDRGEVFGWGNAEYDQIPTINNEQQVSNPVHLKHLK-VGKVVDVAAG 357
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
GS C LN+ G V+ WGYGL+ GPK ++ +P +P LFG++ F P ++V + G
Sbjct: 358 GSFCLALNEHGEVFVWGYGLVLGGPKAEQTSRPRKLPEVLFGRNDFQPNNRVVQVACGLS 417
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
A+T+ G +Y WG+N G LGLG DQ FP KVA+GG
Sbjct: 418 YAMAVTSLGDVYAWGRNMRGCLGLGFANDQNFPFKVALGG 457
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 22/211 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+TDI CG T+ T ++ CG +D Q G + +F RI
Sbjct: 244 KVTDIECGQDHTLAVTDDG----AVYSCGWGADGQTGL-------GTFDNTSAFTRITGE 292
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ S +I +++ + + D F +GN + Q I E+ ++ L
Sbjct: 293 IE--SEKIVKISSRSDFALALNDRGEVFGWGNAEYDQIPT-INNEQQVSNPV---HLKHL 346
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWG--ADGQTGLGHLNNQETPCLVRGEIE---G 177
+ K++D G L L E G+V+ G+G G ++ P ++ G +
Sbjct: 347 KVGKVVDVAAGGSFCLALNEHGEVFVWGYGLVLGGPKAEQTSRPRKLPEVLFGRNDFQPN 406
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
R+V+++ + +AV+ GDV+ WG + G
Sbjct: 407 NRVVQVACGLSYAMAVTSLGDVYAWGRNMRG 437
>gi|195032946|ref|XP_001988590.1| GH10494 [Drosophila grimshawi]
gi|193904590|gb|EDW03457.1| GH10494 [Drosophila grimshawi]
Length = 455
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/350 (48%), Positives = 235/350 (67%), Gaps = 14/350 (4%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIP 60
+ITD+ GYGFT A K D LFG GLN+DSQLG+ +P L++++ I
Sbjct: 88 EITDVTAGYGFTAYAVKRSDGE-TLFGSGLNTDSQLGFQVKGNSKDPANLDVIIYPTAIK 146
Query: 61 LPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
LP + T Q++ +++GRAH +V+T N FT GNNS+GQCGR I+++E Y
Sbjct: 147 LPREQGETDEDMQVRSMSSGRAHLVVVTQNGTVFTMGNNSYGQCGRSIIEDERYTASALI 206
Query: 117 HNI--ADLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+ I AD+ G ++I+ CGQDH+LFLT+ G+VYSCGWGADGQTG G+ + L+
Sbjct: 207 NRIPQADICGAEDEIVAVECGQDHSLFLTKLGRVYSCGWGADGQTGQGNYHTAGQITLIA 266
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES---EMQISTPRVLSQCKGV 229
G+IE ERIV+++ + DCVLA++++GD+FGWGNSEYGQ+ +S E QI TPR L+ KG+
Sbjct: 267 GDIEKERIVRVACSSDCVLALNEQGDIFGWGNSEYGQLDDSVDAETQICTPRALTLTKGI 326
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
++ DVA+GGS C LND+GLVY+WGYG+LG GP V +S KP + LFG++ F+ +
Sbjct: 327 GKVKDVAAGGSFCMALNDQGLVYTWGYGILGFGPTVEQSSKPQHLLPPLFGRNDFSNATT 386
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 387 VISIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 436
>gi|195118174|ref|XP_002003615.1| GI18011 [Drosophila mojavensis]
gi|193914190|gb|EDW13057.1| GI18011 [Drosophila mojavensis]
Length = 460
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/350 (48%), Positives = 232/350 (66%), Gaps = 14/350 (4%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIP 60
+ITD+ GYGFT A K D L LFG GLN+DSQLGY K +P L++++ I
Sbjct: 93 EITDVTAGYGFTAYAVKRSD-GLTLFGSGLNTDSQLGYQVKGNKKDPANLDVIIYPTAIQ 151
Query: 61 LPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
LP T Q+K ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y G
Sbjct: 152 LPRLQGETDEDMQVKSMSAGRAHLVVLTQNGTVFTMGNNSYGQCGRSIIEEEKYSGSALI 211
Query: 117 HNIADLE----GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+ IA + ++++ CGQDHT+ L++ G+VY+CGWGADGQTG G+ + L+
Sbjct: 212 NRIAQRDICGADDELVAVECGQDHTMLLSKLGRVYTCGWGADGQTGQGNYYSAGQITLIG 271
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE---MQISTPRVLSQCKGV 229
G+IE ERIV+++ A DCVLA+++KGDVFGWGNSEYGQ+ ++ QI TPR L+ KG+
Sbjct: 272 GDIEKERIVRIACASDCVLALNEKGDVFGWGNSEYGQLDDAPDAVTQICTPRALTLTKGL 331
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
++ DVA+GGS C LND+GLVY+WGYG+LG GP V ++ KP + LFG++ F+ +
Sbjct: 332 GKVKDVAAGGSFCMALNDQGLVYTWGYGILGFGPFVEQTSKPQHLLPPLFGRNDFSNATT 391
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 392 VVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 441
>gi|15809010|ref|NP_291050.1| Williams-Beuren syndrome chromosomal region 16 protein homolog [Mus
musculus]
gi|23822302|sp|Q9CYF5.1|WBS16_MOUSE RecName: Full=Williams-Beuren syndrome chromosomal region 16
protein homolog
gi|21552744|gb|AAM62305.1|AF410456_1 RCC1-like G exchanging factor-like protein [Mus musculus]
gi|12857127|dbj|BAB30902.1| unnamed protein product [Mus musculus]
gi|19353269|gb|AAH24714.1| Williams-Beuren syndrome chromosome region 16 homolog (human) [Mus
musculus]
gi|33244023|gb|AAH55335.1| Williams-Beuren syndrome chromosome region 16 homolog (human) [Mus
musculus]
gi|148687507|gb|EDL19454.1| Williams-Beuren syndrome chromosome region 16 homolog (human) [Mus
musculus]
Length = 461
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 231/341 (67%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 105 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 163
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS GQCGR +V++E Y H +
Sbjct: 164 PLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 224 DFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LA+S G VFGWGNSEY Q++ Q++ PR L GV ++ VA G
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG 341
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GPK+ + P +IP TLFG +FNP+ +V + G
Sbjct: 342 GTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLS 401
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 402 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
>gi|194853774|ref|XP_001968219.1| GG24626 [Drosophila erecta]
gi|190660086|gb|EDV57278.1| GG24626 [Drosophila erecta]
Length = 454
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 234/353 (66%), Gaps = 20/353 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELV-MSFVRIPL 61
+ITD+A GYGFT A K +D LFG GLN+DSQLG+ + KGNP + + + P
Sbjct: 87 EITDVAAGYGFTAYAVK-RDDGETLFGSGLNTDSQLGF---QVKGNPYDPANLDVIIYPT 142
Query: 62 PVKHPSTQ--------IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+K P Q +K ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 143 AIKLPRVQGETDDDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKS 202
Query: 114 WFCHNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H I+ D+ G ++++ CGQDH++FLT+ G+VY+CGWGADGQTG G+ +
Sbjct: 203 ALVHRISQEDICGKEDEVLQVECGQDHSMFLTKKGRVYTCGWGADGQTGQGNYHTAGQIT 262
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQC 226
L+ G+IE E+IV+LS + DCVLA+++ GD FGWGNSEYGQ+ +SE+ QI+ PR L
Sbjct: 263 LIGGDIEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLT 322
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
K + +I DVA+GGS C LND+GLVY+WG+G+LG GP V ++ KP + LFG++ F+
Sbjct: 323 KSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSN 382
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
++ V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 383 ETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKTAINGK 435
>gi|195437580|ref|XP_002066718.1| GK24412 [Drosophila willistoni]
gi|194162803|gb|EDW77704.1| GK24412 [Drosophila willistoni]
Length = 461
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/356 (46%), Positives = 231/356 (64%), Gaps = 20/356 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-------LELVMS 55
++TD+ GYGFT A + D LFGCGLN+DSQLGY + K N L++++
Sbjct: 88 EVTDVTAGYGFTAYAVQRSDGE-TLFGCGLNTDSQLGYQVKKVKSNSPAQDPANLDVIIY 146
Query: 56 FVRIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ 111
I LP +H T Q++ ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 147 PTAIQLPREHGETAEDMQVRSMSAGRAHLVVVTRNGHVFTLGNNSYGQCGRSIIEEERYS 206
Query: 112 GKWFCHNIADLE----GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
H I+ ++ ++I+ CGQDHT+FLT+ G+VY+CGWGADGQTG G+ ++
Sbjct: 207 KSAIIHRISQVDICGPDDEIVSVECGQDHTMFLTKLGRVYTCGWGADGQTGQGNYHSAGQ 266
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI----SESEMQISTPRVL 223
L+ G+I+ ERIV LS + DCVLA+++ GD FGWGNSEYGQ+ ++ QI+ PR L
Sbjct: 267 ITLIEGDIKKERIVSLSCSSDCVLALNEHGDCFGWGNSEYGQLDNDPEHAQTQINVPRAL 326
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
+ K + RI VASGGS C LND+GLVY+WGYG+LG GP V ++ KP + LFG++
Sbjct: 327 TLTKEIGRIRQVASGGSFCMALNDQGLVYTWGYGILGFGPFVEQTSKPQHLLPPLFGRND 386
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F+ + V S+ G GAI + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 387 FSNATTVVSIGCGVFHMGAINSDGDLFMWGKNRFGHLGLGHKKDQFFPFKTALNGK 442
>gi|427788267|gb|JAA59585.1| Putative e3 ubiquitin-protein ligase herc3 [Rhipicephalus
pulchellus]
Length = 458
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 229/337 (67%), Gaps = 8/337 (2%)
Query: 4 ITDIACGYGFTVV-ATKSKDKN-LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ D+ACGYGFT++ A + + KN K++G G+N+D QLGY RK G+PL+++ V IPL
Sbjct: 104 VDDVACGYGFTLLSAQEDRIKNPSKVYGTGINTDFQLGYQCARK-GHPLKVLTEPVGIPL 162
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P+K ST+I +A GR+H+IV+TD EGAF+FGNNSFGQCGR +V +E + +
Sbjct: 163 PLKSESTRILRVACGRSHSIVLTDKEGAFSFGNNSFGQCGRPVVTDESPESCATPRQVQG 222
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ G KI+D VCGQDHTLFLT+ G VYSCGW ADGQTGLG +Q TP V G++ G IV
Sbjct: 223 IRG-KIVDVVCGQDHTLFLTDEGAVYSCGWSADGQTGLGIYGSQGTPKRVNGDLSGVHIV 281
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ VDC+LAVSD GD+FGWGNSEYGQ + Q+ R L+ G ++ VASGG
Sbjct: 282 RIAGTVDCILAVSDSGDLFGWGNSEYGQFGRQTDDKQMCFARNLNFPHG--KVKAVASGG 339
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ C ++ + G VY WGYGLLG GP+VS PTL+P LFG ++F P ++V L G
Sbjct: 340 TMCGVVTESGDVYVWGYGLLGLGPEVSVKTVPTLLPRPLFGANRFAPDTQVVDLFCGLNH 399
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
F A+ + G LY WGKN+ G LGLG DQ FP +V++
Sbjct: 400 FAALNSRGELYTWGKNRNGCLGLGHSMDQHFPFRVSL 436
>gi|443705337|gb|ELU01947.1| hypothetical protein CAPTEDRAFT_158323 [Capitella teleta]
Length = 452
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/340 (50%), Positives = 230/340 (67%), Gaps = 8/340 (2%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD-PRKKGNPLELVMSFVRI 59
++K +ACGYGFTV + +D FG G+N+DSQLG+ + P+K G L+ V+ V I
Sbjct: 95 VLKTNALACGYGFTVFIGQ-RDSKPVAFGTGINTDSQLGFQEYPKKSGRILDYVIQPVGI 153
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
LP+++ T++ +A GRAHT+++TD EG FT GNN++GQCGRGIV++E Y G N
Sbjct: 154 DLPLENSETKLLQVACGRAHTVIVTDQEGCFTLGNNAYGQCGRGIVEKEIYGGSQTV-NR 212
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
++EG I VCGQDH+LFL + G+V+SCG G+DGQTGLGH ++ + LV G+IEGE
Sbjct: 213 VEVEG-IIKQVVCGQDHSLFLMDDGRVFSCGIGSDGQTGLGHYKSEASLSLVGGDIEGED 271
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ---ISESEMQISTPRVLSQCKGVSRIVDVA 236
IV LS D VLAVS KGD+FGWGNSEY Q +S +E Q++ PR L V +V A
Sbjct: 272 IVHLSCKGDTVLAVSGKGDLFGWGNSEYDQLSSVSNNETQVNVPRHLP-FSSVGHVVRSA 330
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
S G+ C +LND+G VY WGYGLLG GP+V +S P IP TLFG+++ NP ++V L G
Sbjct: 331 SAGAMCLLLNDKGDVYVWGYGLLGCGPQVEQSALPMQIPPTLFGKNELNPDAQVVDLQCG 390
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
F A+T+ G L+ WG+N G LGLGT +DQ FP KV V
Sbjct: 391 LYHFAALTSDGDLFTWGRNMRGALGLGTAKDQYFPYKVHV 430
>gi|194758819|ref|XP_001961656.1| GF14822 [Drosophila ananassae]
gi|190615353|gb|EDV30877.1| GF14822 [Drosophila ananassae]
Length = 453
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/350 (47%), Positives = 232/350 (66%), Gaps = 14/350 (4%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIP 60
+ITD+ GYGFT A + +D LFG GLN+DSQLG+ +P L++++ I
Sbjct: 86 EITDVTAGYGFTAYAVQ-RDDGETLFGSGLNTDSQLGFQVKGNAKDPSNLDVIIYPTAIK 144
Query: 61 LPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
LP + T Q+K ++ GRAH +V+T N FT GNNS+GQCGR I+++E Y G
Sbjct: 145 LPRRQEETDEDMQVKSMSAGRAHLVVVTKNGTVFTLGNNSYGQCGRSIIEDERYSGSALI 204
Query: 117 HNI--ADLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
H I D+ G ++I CGQDHT+FLT++G++Y+CGWGADGQTG G+ + L+
Sbjct: 205 HRIPQEDICGKEDEITHVECGQDHTMFLTKNGRIYTCGWGADGQTGQGNYHTAGQITLIG 264
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE---MQISTPRVLSQCKGV 229
G+I E+IV+++ + DCVLA+++ GDVFGWGNSEYGQ+ +SE QI+TPR L KG+
Sbjct: 265 GDIAKEKIVRVTCSSDCVLALNEAGDVFGWGNSEYGQLDDSEHAETQINTPRALKLTKGI 324
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
RI DVA+GGS C L DEGLVY+WG+G+LG GP V ++ +P + LFG++ F+ +
Sbjct: 325 GRIKDVAAGGSFCMALTDEGLVYTWGFGILGFGPFVEQTSRPQHLLPPLFGRNDFSNATT 384
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 385 VVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 434
>gi|195470358|ref|XP_002087475.1| GE15898 [Drosophila yakuba]
gi|194173576|gb|EDW87187.1| GE15898 [Drosophila yakuba]
Length = 454
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 237/353 (67%), Gaps = 20/353 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFT A K +D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 87 EITDVAAGYGFTAYAVK-RDDGETLFGSGLNTDSQLGF---QVKGNPNDPANLDVIIYPT 142
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP T ++K+++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 143 AIKLPRVQGETDEDMRVKNMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKS 202
Query: 114 WFCHNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H I+ D+ G ++++ CGQDH++FLT+ G+VY+CGWGADGQTG G+ +
Sbjct: 203 ALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRVYTCGWGADGQTGQGNYHTAGQIT 262
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQC 226
L+ G+IE E+IV+LS + DCVLA+++ GD FGWGNSEYGQ+ +SE+ QI+ PR L
Sbjct: 263 LIGGDIEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLT 322
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
K + +I DVA+GGS C LND+GLVY+WG+G+LG GP V ++ KP + LFG++ F+
Sbjct: 323 KSLGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSN 382
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
++ V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 383 ETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKTAINGK 435
>gi|410984664|ref|XP_003998646.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Felis catus]
Length = 509
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 228/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-LELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK E V+ +PL
Sbjct: 153 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDTTRGYEYVLEPSPVPL 211
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P TQ+ ++ GRAH++++TD EG F+ GNNS+GQCGR +V++E Y +
Sbjct: 212 PLDRPQDTQVLQVSCGRAHSLILTDREGVFSMGNNSYGQCGRNVVEDEIYSESHRVTRLQ 271
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D EG+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G +
Sbjct: 272 DFEGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSVPTKLGGDLAGVHV 330
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V+L++ DC LAVS +G +FGWGNSEY Q++ Q++ PR L GV R+ A G
Sbjct: 331 VQLATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGRVKQAACG 389
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP+ +V + G
Sbjct: 390 GTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTEFNPEVQVSLIRCGLS 449
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 450 HFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 490
>gi|354484821|ref|XP_003504585.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Cricetulus griseus]
Length = 387
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/340 (47%), Positives = 228/340 (67%), Gaps = 7/340 (2%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPLP 62
IT ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PLP
Sbjct: 32 ITSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPAPVPLP 90
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ P T++ ++ GRAH++++TD EG F+ GNNS GQCGR +V++E Y H + D
Sbjct: 91 LDRPQETKVLQVSCGRAHSLILTDREGVFSMGNNSHGQCGRKVVEDEVYSESHTVHRMQD 150
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G+ ++ VCGQDH+LFLT G+VYSCGWGADGQTGLGH N TP + G++ G ++
Sbjct: 151 FDGQ-VVQVVCGQDHSLFLTNKGEVYSCGWGADGQTGLGHYNITSTPTKLAGDLAGVTVI 209
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
++++ DC LAVS G VFGWGNSEY Q++ Q++ PR L + V ++ VA GG
Sbjct: 210 QVATYGDCCLAVSSDGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSE-VGKVKQVACGG 268
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ C +LN+EG V+ WGYG+LG+GP + + P +IP TLFG +FNP +V + G
Sbjct: 269 TGCAVLNEEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLTEFNPHIQVSQIRCGLSH 328
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 329 FAALTNNGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 368
>gi|395842918|ref|XP_003794254.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Otolemur garnettii]
Length = 468
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 162/341 (47%), Positives = 229/341 (67%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+ RK K E V+ IPL
Sbjct: 112 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFQRSRKDKTRGYEYVLEPSPIPL 170
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD+EG F+ GNNS+GQCGR +V++E Y H +
Sbjct: 171 PLDRPQETRVLQVSCGRAHSLVLTDSEGVFSMGNNSYGQCGRKVVEDEIYSESHKIHRMQ 230
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P ++G++ G I
Sbjct: 231 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSVPTKLQGDLAGVNI 289
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 290 VQVATYGDCCLAVSADGGLFGWGNSEYRQLASVTESTQVNVPRCLP-FSGVGKVRQAACG 348
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP+ +V + G
Sbjct: 349 GTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTEFNPEVRVSHIRCGLS 408
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 409 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 449
>gi|24580714|ref|NP_608550.1| CG3862 [Drosophila melanogaster]
gi|7296158|gb|AAF51451.1| CG3862 [Drosophila melanogaster]
Length = 454
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 237/353 (67%), Gaps = 20/353 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFTV A ++D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 87 EITDVAAGYGFTVYAV-NRDDGETLFGSGLNTDSQLGF---QVKGNPNDPANLDVIIYPT 142
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP T ++K ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 143 AIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKS 202
Query: 114 WFCHNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H I+ D+ G ++++ CGQDH++FLT+ G++Y+CGWGADGQTG G+ +
Sbjct: 203 ALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQIT 262
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQC 226
L+ G++E E+IV+LS + DCVLA+++ GD FGWGNSEYGQ+ +SE+ QI+ PR L
Sbjct: 263 LIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLT 322
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
K + +I DVA+GGS C LND+GLVY+WG+G+LG GP V ++ KP + LFG++ F+
Sbjct: 323 KSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSN 382
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
++ V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 383 ETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 435
>gi|162944936|gb|ABY20537.1| RH09889p [Drosophila melanogaster]
Length = 462
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 237/353 (67%), Gaps = 20/353 (5%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFTV A ++D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 95 EITDVAAGYGFTVYAV-NRDDGETLFGSGLNTDSQLGF---QVKGNPNDPANLDVIIYPT 150
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP T ++K ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 151 AIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKS 210
Query: 114 WFCHNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H I+ D+ G ++++ CGQDH++FLT+ G++Y+CGWGADGQTG G+ +
Sbjct: 211 ALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQIT 270
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQC 226
L+ G++E E+IV+LS + DCVLA+++ GD FGWGNSEYGQ+ +SE+ QI+ PR L
Sbjct: 271 LIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLT 330
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
K + +I DVA+GGS C LND+GLVY+WG+G+LG GP V ++ KP + LFG++ F+
Sbjct: 331 KSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGPFVEQTSKPQHLLPPLFGRNDFSN 390
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
++ V S+ G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 391 ETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 443
>gi|195388414|ref|XP_002052875.1| GJ19641 [Drosophila virilis]
gi|194149332|gb|EDW65030.1| GJ19641 [Drosophila virilis]
Length = 455
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 170/350 (48%), Positives = 233/350 (66%), Gaps = 14/350 (4%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIP 60
+ITD+ GYGFTV A K D LFG GLN+DSQLG+ K +P L++++ I
Sbjct: 88 EITDVTAGYGFTVYAVKRSDGQ-TLFGSGLNTDSQLGFQVKGNKKDPANLDVIIYPTAIQ 146
Query: 61 LPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
LP + T Q++ ++ GRAH +V+T N FT G+N++GQCGR I+++E Y G
Sbjct: 147 LPREQGETDEDMQVRCMSAGRAHLVVVTQNGTVFTMGHNAYGQCGRSIIEDEVYTGSSLI 206
Query: 117 HNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
H IA D+ G ++I+ CGQDHT+ LT+ G+VYSCGWGADGQTG G+ + LV
Sbjct: 207 HRIAQTDICGAEDEIVAVECGQDHTMLLTKLGRVYSCGWGADGQTGQGNYYSAGQLTLVG 266
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES---EMQISTPRVLSQCKGV 229
G+IE ERIV+++ A DCVLA+++ GDVFGWGNSEYGQ+ +S QI TPR L KG+
Sbjct: 267 GDIEKERIVRIACASDCVLALNEHGDVFGWGNSEYGQLDDSPDAAPQICTPRALQLTKGI 326
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
++ DVA+GGS C LND+GLVY+WGYG+LG GP V ++ KP + LFG++ F+ +
Sbjct: 327 GKVKDVAAGGSFCMALNDQGLVYTWGYGILGFGPFVEQTSKPQHLLPPLFGRNDFSNATT 386
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
V S+ G GAI + G L+MWGKN++G LG+G +DQ FP K A+ G+
Sbjct: 387 VVSIGCGVFHMGAINSDGDLFMWGKNRFGHLGVGHKKDQFFPFKAAINGK 436
>gi|300797400|ref|NP_001179275.1| Williams-Beuren syndrome chromosomal region 16 protein [Bos taurus]
gi|296473058|tpg|DAA15173.1| TPA: Williams-Beuren syndrome chromosome region 16 homolog [Bos
taurus]
Length = 464
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/341 (47%), Positives = 227/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 108 KISSAACGYGFTLLSSKTKDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 VQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>gi|395537113|ref|XP_003770549.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Sarcophilus harrisii]
Length = 478
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/341 (47%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
+I+ +ACGYGFT+++++++D K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 122 RISSVACGYGFTLLSSQTQDIT-KVWGMGLNKDSQLGFHRSRKDKSRGYEYVLEPSPVPL 180
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ +A GRAH++++TD EG + GNNS+GQCGR +V E Y H +
Sbjct: 181 PLDRPQETRVLQVACGRAHSLILTDREGVLSMGNNSYGQCGRAVVANEIYSESHQVHRMR 240
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G +++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP V G I G RI
Sbjct: 241 DFDG-RVVQIVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPTKVGGAIGGVRI 299
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ D LAVS GD+FGWGNSEY Q++ Q++ P L G+ ++ A G
Sbjct: 300 VQVATYGDFCLAVSADGDLFGWGNSEYLQLASITEATQVNIPTHLP-FSGIGKVKQAACG 358
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G++ +LNDEG V+ WGYG+LG+GP + + P +IP TLFG FNP +V + G
Sbjct: 359 GTSGAVLNDEGNVFVWGYGILGKGPNLMETALPEMIPPTLFGLSDFNPDVRVSHICCGLS 418
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + GQ
Sbjct: 419 QFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMSGQ 459
>gi|194218802|ref|XP_001915749.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Equus caballus]
Length = 437
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 230/341 (67%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKG-NPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK E V+ IPL
Sbjct: 81 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDHMRGYEYVLEPSPIPL 139
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++++TD+EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 140 PLDRPQETRVLQVSCGRAHSLILTDSEGVFSLGNNSYGQCGRKVVENEIYSESHKVHRMR 199
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH + TP ++ G++ G +
Sbjct: 200 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYSITSTPTMLGGDLAGVNV 258
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 259 VQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQAACG 317
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN+EG V+ WGYG+LG+GP + + P +IP +LFG +FNP+ +V + G
Sbjct: 318 GTGCAVLNEEGRVFVWGYGILGKGPNLVETALPEMIPPSLFGLTEFNPEVQVSRIRCGLS 377
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 378 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 418
>gi|444720585|gb|ELW61367.1| Williams-Beuren syndrome chromosomal region 16 protein [Tupaia
chinensis]
Length = 381
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 228/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++A+K+KD K++G GLN DSQLG+H RK K E V+ IPL
Sbjct: 25 KISSAACGYGFTLLASKTKDVT-KVWGMGLNKDSQLGFHRSRKDKSRGYEYVLEPSPIPL 83
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD+EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 84 PLDRPQETRVLQVSCGRAHSLVLTDSEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQ 143
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 144 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSVPTKLGGDLVGAHI 202
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 203 VQVATYGDCCLAVSSDGALFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQAACG 261
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C ++N EG V+ WGYG+LG+GP + + P +IP TLFG + +P+++V + G
Sbjct: 262 GTGCAVVNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTEVSPETQVSRIRCGLS 321
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 322 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 362
>gi|296192210|ref|XP_002743966.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Callithrix jacchus]
Length = 649
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/335 (47%), Positives = 224/335 (66%), Gaps = 7/335 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 112 KISSAACGYGFTLLSSKTTDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 170
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ +A GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 171 PLDRPQETRVLQVACGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 230
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 231 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNV 289
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q+S Q++ PR L GV ++ + A G
Sbjct: 290 LQVATYGDCCLAVSADGGLFGWGNSEYLQLSSVTDSTQVNVPRCL-HFSGVGKVQEAACG 348
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP+ +V + G
Sbjct: 349 GTGCAVLNGEGHVFVWGYGILGKGPNLVETAIPEMIPPTLFGLTEFNPEVRVSRIRCGLS 408
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
F A+TN G L++WGKN G LG+G +EDQ FP +
Sbjct: 409 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 443
>gi|344289917|ref|XP_003416687.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like [Loxodonta africana]
Length = 472
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 226/340 (66%), Gaps = 7/340 (2%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH-DPRKKGNPLELVMSFVRIPLP 62
I+ ACGYGFT++++K+KD K++G GLN DSQLG+H P+ K E V+ +PLP
Sbjct: 117 ISSAACGYGFTLLSSKTKDVT-KVWGMGLNQDSQLGFHRSPKDKSRGYEYVLEPSPVPLP 175
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ P T++ ++ GRAH++++TD EG F+ GNNS+GQCGR +V+ E Y H + D
Sbjct: 176 LDRPQETRVLQVSCGRAHSLILTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQD 235
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G+ ++ CGQDH+LFLT+ G+VY+CGWGADGQTGLGH N P + G++ G I+
Sbjct: 236 FDGQ-VVQVACGQDHSLFLTDKGEVYACGWGADGQTGLGHYNVSSVPTKLGGDLAGVNII 294
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
++++ DC LAVS GDVFGWGNSEY Q++ Q++ PR L GV ++ A GG
Sbjct: 295 QVATYGDCCLAVSADGDVFGWGNSEYLQLASITDSTQVNVPRCLP-FSGVGKVKQAACGG 353
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG + NP+ +V + G
Sbjct: 354 TGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLTELNPEIQVSRIRCGLSH 413
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 414 FAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 453
>gi|426356571|ref|XP_004045635.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like isoform 1 [Gorilla gorilla gorilla]
Length = 456
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSTDGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVRLAGE 445
>gi|355560579|gb|EHH17265.1| hypothetical protein EGK_13621, partial [Macaca mulatta]
Length = 436
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 225/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 80 KISSAACGYGFTLLSSKTTDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 138
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E Y H +
Sbjct: 139 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQ 198
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 199 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNI 257
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 258 VQVTTYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRTL-HFSGVGKVRQAACG 316
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 317 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEVQVSRIRCGLS 376
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 377 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 417
>gi|380796171|gb|AFE69961.1| Williams-Beuren syndrome chromosomal region 16 protein, partial
[Macaca mulatta]
Length = 445
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 225/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 89 KISSAACGYGFTLLSSKTTDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 147
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E Y H +
Sbjct: 148 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQ 207
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 208 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNI 266
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 267 VQITTYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 325
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 326 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEVQVSRIRCGLS 385
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 386 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 426
>gi|351714155|gb|EHB17074.1| Williams-Beuren syndrome chromosomal region 16 protein-like protein
[Heterocephalus glaber]
Length = 455
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 229/343 (66%), Gaps = 7/343 (2%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRI 59
+ +I+ ACGYGFT++A+++KD K++G GLN DSQLG+H RK K E V+ +
Sbjct: 97 LFQISSAACGYGFTLLASRTKDVT-KVWGMGLNKDSQLGFHQSRKDKTRGYEYVLEPSPV 155
Query: 60 PLPVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
LP+ P T++ +A GRAH++++TD EG F+ GNN++GQCGR +V++E Y H
Sbjct: 156 ALPLDRPQETRVLQVACGRAHSLILTDREGVFSMGNNAYGQCGRKVVEDEVYSESHRVHR 215
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N T + G++ G
Sbjct: 216 MQYFDGQ-VVQVACGQDHSLFLTDRGEVYSCGWGADGQTGLGHYNVTSTATKLGGDLAGV 274
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVA 236
++++++ DC LAVS G VFGWGNSEY Q++ Q+S PR L GV ++ VA
Sbjct: 275 EVLQVATYGDCCLAVSADGAVFGWGNSEYLQLASITDSTQVSVPRSLP-FSGVGKVKQVA 333
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
GG+ C +LN+EG V+ WGYG+LG+GPK+ + P +IP TLFG +F+P +V + G
Sbjct: 334 CGGTGCAVLNEEGSVFVWGYGILGKGPKLVETAVPEMIPPTLFGLTEFSPDVQVSRIRCG 393
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 394 LSHFAALTNKGELFVWGKNVRGCLGIGRLEDQYFPWRVTMPGE 436
>gi|224076082|ref|XP_002191844.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Taeniopygia guttata]
Length = 442
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 227/341 (66%), Gaps = 8/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++A+ ++D K++G GLN DSQLG+ R+ + E V+ IPL
Sbjct: 87 KISSAACGYGFTLLASNTRDIT-KVWGMGLNKDSQLGFQRSRRDQTKGYEYVLEPSPIPL 145
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P++ P T++ ++ GRAH++V+TD+EG FT GNNS+GQCGR +V++E Y G H +
Sbjct: 146 PLEKPQQTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSGSHLIHQLK 205
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ + +++ VCGQDH+LF T+ G VY+CGWGADGQTGLGH N P + G+I G I
Sbjct: 206 EFD-SRVVQVVCGQDHSLFRTKKGTVYACGWGADGQTGLGHYNITSVPTKLHGDIAGVNI 264
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++SS DC LAVSD+GDVFGWGNSEY Q++ Q++ PR L + ++ + A G
Sbjct: 265 IQVSSYGDCCLAVSDEGDVFGWGNSEYLQLASVTETTQVNVPRHLP--FKIGKVKEAACG 322
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ +L +EG V+ WGYG+LG+GP + + P +IP +LFG FNP ++V + G
Sbjct: 323 GTGNVVLTEEGNVFVWGYGILGKGPNLIETAVPEMIPPSLFGWSDFNPDTRVAHVRCGLS 382
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG G +EDQ FP +V V G+
Sbjct: 383 QFAALTNRGELFVWGKNLRGCLGTGRMEDQYFPWRVTVPGE 423
>gi|14043717|gb|AAH07823.1| Williams-Beuren syndrome chromosome region 16 [Homo sapiens]
gi|17512067|gb|AAH19008.1| Williams-Beuren syndrome chromosome region 16 [Homo sapiens]
gi|123992987|gb|ABM84095.1| Williams-Beuren syndrome chromosome region 16 [synthetic construct]
Length = 464
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>gi|350581519|ref|XP_003354559.2| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Sus scrofa]
Length = 470
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K++D K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 114 KISSAACGYGFTLLSSKTRDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 172
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P TQ+ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 173 PLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQ 232
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G +
Sbjct: 233 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNV 291
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 292 VQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG 350
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG + NP+ +V + G
Sbjct: 351 GTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLS 410
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 411 HFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 451
>gi|114614051|ref|XP_001153683.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
isoform 4 [Pan troglodytes]
gi|410223042|gb|JAA08740.1| Williams-Beuren syndrome chromosome region 16 [Pan troglodytes]
gi|410248558|gb|JAA12246.1| Williams-Beuren syndrome chromosome region 16 [Pan troglodytes]
gi|410295016|gb|JAA26108.1| Williams-Beuren syndrome chromosome region 16 [Pan troglodytes]
Length = 464
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKMRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>gi|402863268|ref|XP_003895950.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
isoform 1 [Papio anubis]
Length = 464
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 225/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTTDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNI 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 VQVTTYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>gi|348531990|ref|XP_003453490.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Oreochromis niloticus]
Length = 451
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 228/343 (66%), Gaps = 11/343 (3%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY----HDPRKKGNPLELVMSFVR 58
+I+ ACGYGFT++A+ +KD KL+G GLN DSQLG+ HD R K L S V
Sbjct: 95 QISSAACGYGFTLIASPTKDVT-KLWGMGLNKDSQLGFQRTQHD-RHKSYDYVLEPSPVA 152
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+PL V+ T++ +A GRAH++V+TD EG F+ GNN++GQCGR IV++E Y G H
Sbjct: 153 LPL-VEPLQTRVVQVACGRAHSLVLTDREGVFSMGNNAYGQCGRRIVEDEVYSGSHIIHK 211
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I G +++ CGQDH+LFLTE+GKV++CGWGADGQTGLGH N +P V G++ G
Sbjct: 212 IEGFSG-RVIQVACGQDHSLFLTETGKVFACGWGADGQTGLGHHNISSSPVEVGGDLAGV 270
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVA 236
+ ++S+ DC LAVS G ++GWGNSEY Q++ Q+++PR L KG ++V A
Sbjct: 271 EVQQISTYGDCSLAVSKDGQLYGWGNSEYRQLALVTQATQMNSPRHLP-LKGCGKVVQAA 329
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
GG+ +LND+G V+ WGYG+LG+GPK+S S P +IP TLFG+ +FNP V + G
Sbjct: 330 CGGTQVAILNDKGEVFVWGYGILGKGPKLSESSTPEMIPPTLFGRSEFNPSGVVSRIRCG 389
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G +DQ FP +V V GQ
Sbjct: 390 LSHFAAVTDRGELFVWGKNVRGCLGIGKKDDQYFPWRVTVPGQ 432
>gi|13540582|ref|NP_110425.1| Williams-Beuren syndrome chromosomal region 16 protein [Homo
sapiens]
gi|116242843|sp|Q96I51.2|WBS16_HUMAN RecName: Full=Williams-Beuren syndrome chromosomal region 16
protein; AltName: Full=RCC1-like G exchanging
factor-like protein
gi|21552742|gb|AAM62304.1|AF410455_1 RCC1-like G exchanging factor-like protein [Homo sapiens]
gi|12053119|emb|CAB66738.1| hypothetical protein [Homo sapiens]
gi|119572475|gb|EAW52090.1| Williams-Beuren syndrome chromosome region 16, isoform CRA_a [Homo
sapiens]
gi|119572476|gb|EAW52091.1| Williams-Beuren syndrome chromosome region 16, isoform CRA_a [Homo
sapiens]
Length = 464
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>gi|397478007|ref|XP_003810350.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like [Pan paniscus]
Length = 456
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 100 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKMRGYEYVLEPSPVSL 158
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 159 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 218
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 219 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 277
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 278 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 336
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 337 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 396
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 397 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 437
>gi|117646892|emb|CAL37561.1| hypothetical protein [synthetic construct]
gi|208965696|dbj|BAG72862.1| Williams-Beuren syndrome chromosome region 16 [synthetic construct]
Length = 464
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHGMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>gi|355728759|gb|AES09645.1| Williams-Beuren syndrome chromosome region 16 [Mustela putorius
furo]
Length = 381
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 227/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 27 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHQSRKDKTRGYEYVLEPSPVPL 85
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++++TD EG F+ GNNS+GQCGR +V+ E Y + +
Sbjct: 86 PLDRPQETRVLQVSCGRAHSLILTDREGVFSMGNNSYGQCGRNVVENEIYSESHKVNRMQ 145
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G +
Sbjct: 146 DFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSVPTKLGGDLAGVNV 204
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS +G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 205 VQVATYGDCCLAVSAEGGLFGWGNSEYLQLAAVTDATQVNVPRCLP-FSGVGKVKQAACG 263
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP +LFG +FNP V + G
Sbjct: 264 GTGCAVLNGEGHVFVWGYGILGKGPNLVESALPEVIPPSLFGLTEFNPGVHVSLIRCGLS 323
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 324 HFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 364
>gi|440908475|gb|ELR58489.1| Williams-Beuren syndrome chromosomal region 16 protein-like
protein, partial [Bos grunniens mutus]
Length = 412
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 56 KISSAACGYGFTLLSSKTKDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 114
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 115 PLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 174
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 175 DFDGQ-VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNV 233
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 234 VQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG 292
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + +IP TLFG +FNP +V + G
Sbjct: 293 GTGCAVLNGEGHVFVWGYGILGKGPNLLETGLSEMIPPTLFGLMEFNPGVQVSRIRCGLS 352
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 353 HFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 393
>gi|431898143|gb|ELK06838.1| Williams-Beuren syndrome chromosomal region 16 protein like protein
[Pteropus alecto]
Length = 464
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 227/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVLL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P TQ+ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G +I
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSVPTKLGGDLTGVKI 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ P+ L GV ++ A G
Sbjct: 286 VQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNIPQCLP-FSGVGKVEQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTEFNPEVQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGHLEDQYFPWRVTMPGE 445
>gi|426356573|ref|XP_004045636.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like isoform 2 [Gorilla gorilla gorilla]
Length = 454
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 222/335 (66%), Gaps = 7/335 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSTDGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
F A+TN G L++WGKN G LG+G +EDQ FP +
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 439
>gi|126314133|ref|XP_001368436.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Monodelphis domestica]
Length = 468
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/343 (47%), Positives = 226/343 (65%), Gaps = 11/343 (3%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR---KKGNPLELVMSFVRI 59
KI+ ACGYGFT++++++KD K++G GLN DSQLG+H R KKG E V+ +
Sbjct: 112 KISSAACGYGFTLLSSQTKDIT-KVWGMGLNKDSQLGFHRSRRNQKKG--YEYVLEPSPV 168
Query: 60 PLPVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
PLP+ P T++ +A GRAH++++TD+EG + GNNS+GQCGR +V E Y H
Sbjct: 169 PLPLDRPQETRVLQVACGRAHSLILTDSEGVLSMGNNSYGQCGRTVVSNEVYSESHKVHR 228
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ D +G +++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P V G I G
Sbjct: 229 MQDFDG-RVLQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKVGGAIAGV 287
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVA 236
IV++++ D LAVS GD+FGWGNSEY Q++ Q++ P L G+ +I VA
Sbjct: 288 NIVQVATYGDFCLAVSADGDLFGWGNSEYLQLASVTEATQVNVPTYLP-FSGIGKIKQVA 346
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
GG+ +LND+G V+ WGYG+LG+GP + + P LIP TLFG F+P +V + G
Sbjct: 347 CGGTGSAVLNDKGNVFVWGYGILGKGPNLMETALPELIPPTLFGLSDFSPDVRVARIFCG 406
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G ++DQ FP +V + G+
Sbjct: 407 LSQFAALTNKGELFVWGKNIRGCLGIGRLDDQYFPWRVTMPGE 449
>gi|21618592|gb|AAH32712.1| WBSCR16 protein [Homo sapiens]
Length = 454
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 222/335 (66%), Gaps = 7/335 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
F A+TN G L++WGKN G LG+G +EDQ FP +
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 439
>gi|402863270|ref|XP_003895951.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
isoform 2 [Papio anubis]
Length = 454
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 221/336 (65%), Gaps = 7/336 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTTDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNI 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 VQVTTYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
F A+TN G L++WGKN G LG+G +EDQ FP +
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRA 440
>gi|391331735|ref|XP_003740298.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Metaseiulus occidentalis]
Length = 455
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/343 (48%), Positives = 222/343 (64%), Gaps = 20/343 (5%)
Query: 4 ITDIACGYGFTVVATKSKDK--NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ DIACGYGFT+ A + ++ + +LFG G+NSDSQLG K + M + P+
Sbjct: 101 MKDIACGYGFTIFAARHDERLNDFELFGTGINSDSQLGSQKADNKAD-----MRLLTEPV 155
Query: 62 PVKHPSTQ------IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
P++ P+ + ++ +A GRAHTI +TD A+ GNNS GQCGR I +E Y G+
Sbjct: 156 PIRFPTHENGRRIHVRKVAAGRAHTIAVTDQGIAYGLGNNSLGQCGREIDPDEVYFGRDL 215
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
I + G K+ + VCG DHTLFLTESG+VY+CGWGADGQTGLGH N P V+G+I
Sbjct: 216 VRRI-RVPG-KVAEVVCGLDHTLFLTESGEVYACGWGADGQTGLGHYGNTGVPQKVQGDI 273
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIV 233
EG RIV+L++ DC LAVS GDVFGWGN+EYGQ+ + E Q TP+ + K RI
Sbjct: 274 EGVRIVELATRGDCSLAVSSSGDVFGWGNNEYGQLLGEKGESQRHTPKHIRFNK---RIK 330
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
VA+GGS+C ++EG VY WGYG+LG GP V S P IP+ LFG + +P ++V SL
Sbjct: 331 KVAAGGSSCLASDEEGRVYCWGYGILGLGPAVGHSSSPKQIPAALFGATELSPNTRVVSL 390
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+G F AI + GHL+ WG+NQ G LGLG ++Q FPLKV +
Sbjct: 391 ASGLNDFAAINDQGHLFTWGRNQNGCLGLGHEKNQMFPLKVNI 433
>gi|410059135|ref|XP_003951091.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
[Pan troglodytes]
Length = 454
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 222/335 (66%), Gaps = 7/335 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKMRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
F A+TN G L++WGKN G LG+G +EDQ FP +
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 439
>gi|291411448|ref|XP_002722000.1| PREDICTED: Williams-Beuren syndrome chromosome region 16 homolog
[Oryctolagus cuniculus]
Length = 466
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 227/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++ +KD K++G GLN DSQLG+ R+ + E V+ +PL
Sbjct: 110 KISSAACGYGFTLLSSTTKDVT-KVWGMGLNKDSQLGFQRSRRDQTRGYEYVLEPSPVPL 168
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V++E Y H +
Sbjct: 169 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSLGNNSYGQCGRKVVEDEVYSESHKVHRLQ 228
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LF+T+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 229 DFDGQ-VVQVACGQDHSLFVTDRGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVHV 287
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G VFGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 288 VQVATYGDCCLAVSADGGVFGWGNSEYRQLASVTDSTQVNVPRRLP-FSGVGKVEQAACG 346
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C ++N EG V+ WGYG+LG+GP + + P +IP TLFG +F+P+ ++ + G
Sbjct: 347 GTGCAVVNGEGRVFVWGYGILGKGPNLVETALPEMIPPTLFGLTEFSPEVRISQVRCGLS 406
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 407 HFAALTNKGELFVWGKNVRGCLGIGRLEDQYFPWRVTMPGE 447
>gi|130488540|ref|NP_001076272.1| Williams-Beuren syndrome chromosome region 16 [Danio rerio]
gi|126631511|gb|AAI33898.1| Si:dkeyp-36f5.3 protein [Danio rerio]
Length = 451
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR-KKGNPLELVMSFVRIPL 61
KI+ ACGYGFT++A+ +KD KL+G GLN DSQLG+ + K + V+ + L
Sbjct: 95 KISSAACGYGFTLLASNTKDLT-KLWGMGLNKDSQLGFQRTQHDKSKSYDYVLEASPVSL 153
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ +P T++ ++ GRAH++V+TD+EG F+ G+N+FGQCGR IV++E Y G H I
Sbjct: 154 PLLNPQETRVPQVSCGRAHSLVLTDSEGVFSMGSNTFGQCGRKIVEDEVYSGSHVVHKIE 213
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ +++ CGQDH+LFLT+ G V++CGWGADGQTGLGH N P V G++ G +
Sbjct: 214 GFD-SRVIQVACGQDHSLFLTDRGSVFACGWGADGQTGLGHHNKASCPVPVGGDLAGVTV 272
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
++++ DC LAVS G VFGWGNSEY Q++ QIS+PR+L KGV RI A G
Sbjct: 273 QQVATYGDCSLAVSTDGQVFGWGNSEYLQLASVTESTQISSPRLLP-LKGVGRIRQAACG 331
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ +LN++G V+ WG+G+LG+GPK+S S P +P+T FG+ +FNP KV S+ G
Sbjct: 332 GTQVAVLNEDGDVFVWGFGILGKGPKLSESAIPERVPATFFGRSEFNPTVKVASIRCGLS 391
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G +DQ FP +V V G
Sbjct: 392 HFAAVTDGGELFVWGKNVRGCLGIGKHDDQYFPWRVTVPGH 432
>gi|355747601|gb|EHH52098.1| hypothetical protein EGM_12469, partial [Macaca fascicularis]
Length = 430
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 223/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 74 KISSAACGYGFTLLSSKTTDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 132
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E Y H +
Sbjct: 133 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQ 192
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 193 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNI 251
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q + PR GV ++ A G
Sbjct: 252 VQVTTYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQGNVPRGF-HFSGVGKVRQAACG 310
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 311 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEVQVSRIRCGLS 370
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 371 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 411
>gi|348550835|ref|XP_003461236.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Cavia porcellus]
Length = 461
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 227/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++++KD K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 105 KISSAACGYGFTLLSSRTKDIT-KVWGMGLNKDSQLGFHRSRKDKVRGYEYVLEPSPVAL 163
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ +A GRAH++++TD EG F+ GNN++GQCGR +V++E Y+ H +
Sbjct: 164 PLDRPQETRVLQVACGRAHSLILTDGEGVFSLGNNAYGQCGRKVVEDEVYRESRRVHRMQ 223
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G +++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G +
Sbjct: 224 DFDG-RVVQVACGQDHSLFLTDRGEVYSCGWGADGQTGLGHYNITSVPTKLGGDLAGVEV 282
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS +G VFGWGNSEY Q++ Q++ PR L GV + +VA G
Sbjct: 283 VQVATYGDCCLAVSAEGAVFGWGNSEYLQLASVMESTQVNVPRSLP-FSGVGTVKEVACG 341
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C MLN +G V+ WGYG+LG+GP + + P +IP LFG +F+ +V + G
Sbjct: 342 GTGCAMLNGDGCVFVWGYGILGKGPCLVETAVPEMIPPMLFGLAEFSADVQVSHIRCGLS 401
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G ++DQ FP +V + G+
Sbjct: 402 HFAALTNKGELFVWGKNTRGCLGIGHLKDQYFPWRVTMPGK 442
>gi|427778957|gb|JAA54930.1| Putative alpha-tubulin suppressor [Rhipicephalus pulchellus]
Length = 531
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/371 (46%), Positives = 231/371 (62%), Gaps = 42/371 (11%)
Query: 4 ITDIACGYGFTVV-ATKSKDKN-LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ D+ACGYGFT++ A + + KN K++G G+N+D QLGY RK G+PL+++ V IPL
Sbjct: 143 VDDVACGYGFTLLSAQEDRIKNPSKVYGTGINTDFQLGYQCARK-GHPLKVLTEPVGIPL 201
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P+K ST+I +A GR+H+IV+TD EGAF+FGNNSFGQCGR +V +E + +
Sbjct: 202 PLKSESTRILRVACGRSHSIVLTDKEGAFSFGNNSFGQCGRPVVTDESPESCATPRQVQG 261
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP------------- 168
+ G KI+D VCGQDHTLFLT+ G VYSCGW ADGQTGLG +Q TP
Sbjct: 262 IRG-KIVDVVCGQDHTLFLTDEGAVYSCGWSADGQTGLGIYGSQGTPKRVNGDLSGVXVY 320
Query: 169 -C--------------------LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
C V G++ G RIV+++ VDC+LAVSD GD+FGWGNSEY
Sbjct: 321 SCGWSADGQTGLGIYGSQGTPKRVNGDLSGVRIVRIAGTVDCILAVSDSGDLFGWGNSEY 380
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKV 265
GQ + Q+ R L+ G ++ VASGG+ C ++ + G VY WGYGLLG GP+V
Sbjct: 381 GQFGRQTDDKQMCFARNLNFPHG--KVKAVASGGTMCGVVTESGDVYVWGYGLLGLGPEV 438
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
S PTL+P LFG ++F P ++V L G F A+ + G LY WGKN+ G LGLG
Sbjct: 439 SVKTVPTLLPRPLFGANRFAPDTQVVDLFCGLNHFAALNSRGELYTWGKNRNGCLGLGHS 498
Query: 326 EDQPFPLKVAV 336
DQ FP +V++
Sbjct: 499 MDQHFPFRVSL 509
>gi|57525281|ref|NP_001006212.1| Williams-Beuren syndrome chromosome region 16 [Gallus gallus]
gi|53133732|emb|CAG32195.1| hypothetical protein RCJMB04_19n17 [Gallus gallus]
Length = 454
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 224/341 (65%), Gaps = 8/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP-RKKGNPLELVMSFVRIPL 61
KIT ACGYGFT++++ + D K++G GLN DSQLG+ R + E V+ IPL
Sbjct: 99 KITSAACGYGFTLLSSNTTDIT-KVWGLGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPL 157
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P++ P T++ ++ GRAH++V+TD+EG FT GNNS+GQCGR +V++E Y H +
Sbjct: 158 PLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLN 217
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D + +++ VCGQDH+LF T+ G V++CGWGADGQTGLGH N P + G+I G I
Sbjct: 218 DFD-SRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNI 276
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++SS DC LAVSD+GD+FGWGNSEY Q++ Q++ PR L + +I + A G
Sbjct: 277 VQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLP--FKIGKIKEAACG 334
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ +L +EG V+ WGYG+LG+GP V+ + P +IP +LFG F+ +V + G
Sbjct: 335 GTGNIVLTEEGAVFVWGYGILGKGPNVTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLS 394
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 395 HFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGE 435
>gi|432901463|ref|XP_004076848.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Oryzias latipes]
Length = 451
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 224/340 (65%), Gaps = 7/340 (2%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP-RKKGNPLELVMSFVRIPLP 62
I+ ACGYGFT++A+ +KD + K++G GLN DSQLG+ R + + V+ + LP
Sbjct: 96 ISSAACGYGFTLLASSTKDVS-KVWGMGLNKDSQLGFQRTQRSRHHSYHYVLEPSPVALP 154
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K P T++ +A GRAH++++TD EG F+ GNN+FGQCGR IV++E Y H +
Sbjct: 155 LKEPLQTRVVQVACGRAHSLILTDREGVFSLGNNAFGQCGRRIVRDEVYSDSHVIHKMEG 214
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G+K++ CGQDH+L LTESG+V++CGWGADGQTGLGH N TP V G++ G +
Sbjct: 215 F-GDKVVQVSCGQDHSLLLTESGRVFACGWGADGQTGLGHHNISSTPVEVGGDLSGVEVQ 273
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
++S+ DC LAVS G +FGWGNSEY Q+S Q+++PR L KG +V A GG
Sbjct: 274 QVSTYGDCSLAVSRDGQLFGWGNSEYRQLSSVTESTQMNSPRHLP-LKGCGTVVQAACGG 332
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +LN++G V+ WGYG+LG+GP +S S P LIP TLFG+ +F+P + V + G
Sbjct: 333 TQVAVLNEKGEVFVWGYGILGKGPNLSESSTPELIPPTLFGRSEFSPSAAVSRIRCGLGH 392
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T G L++WGKN G LG+G +DQ FP +V V G+
Sbjct: 393 FAAVTEGGELFVWGKNIRGCLGIGKRDDQFFPWRVTVPGR 432
>gi|213514362|ref|NP_001133817.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
gi|209155436|gb|ACI33950.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
Length = 450
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 224/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
+I+ ACGYGFT++++ +KD K++G GLN DSQLG+ ++ + + V+ +PL
Sbjct: 94 QISSAACGYGFTLLSSSTKDLT-KVWGMGLNRDSQLGFQRTQQDRHKSYDYVLEPSPVPL 152
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ +A GRAH++V+TD+EG F+ GNN++GQCGR +V++E Y H +
Sbjct: 153 PLARPQQTRVVQVACGRAHSLVLTDSEGVFSLGNNAYGQCGRKMVEDEVYSASHIIHKME 212
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ + VCGQDH+LFLTE+GKVY+CGWGADGQTGLGH N P V G++ G R+
Sbjct: 213 GFD-SPVTQVVCGQDHSLFLTETGKVYACGWGADGQTGLGHHNMCARPVAVGGDLAGVRV 271
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
++++ DC +AVS G ++GWGNSEY Q+S QI++PR+L + V ++ VA G
Sbjct: 272 QQVTTYGDCSMAVSQDGQLYGWGNSEYLQLSSVTEATQINSPRLLP-FERVGKVTQVACG 330
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ +LN+ G V+ WGYG+LG+GP +S S P L+P LFG+ +FNP V + G
Sbjct: 331 GTQVAILNERGEVFVWGYGILGKGPNLSESQTPELVPPALFGRSEFNPAVTVSRIHCGLN 390
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G EDQ FP +V V G
Sbjct: 391 HFAAVTDRGELFVWGKNVRGCLGIGKKEDQYFPWRVTVPGH 431
>gi|260804625|ref|XP_002597188.1| hypothetical protein BRAFLDRAFT_276208 [Branchiostoma floridae]
gi|229282451|gb|EEN53200.1| hypothetical protein BRAFLDRAFT_276208 [Branchiostoma floridae]
Length = 473
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 227/340 (66%), Gaps = 14/340 (4%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN--PLELVMSFVRIPLPVKH 65
+CGYGFTV+ T SK+K K++G G+N++SQLG + + +++ +V P PV
Sbjct: 119 SCGYGFTVL-TSSKEKG-KVWGTGVNTESQLGLQKAVRSTHEGARTVILDYVIAPAPVDL 176
Query: 66 P-----STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P TQ+ +A GRAHT+++TD EG F+ GNN++GQCGR +V+ E+Y+G + +
Sbjct: 177 PLTNPQETQVLQVACGRAHTLILTDGEGVFSLGNNAYGQCGRPVVENEEYRGSSQINRVR 236
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+EG K+ G DH+LFLTE G+VYSCGWGADGQTGLGH ++ P + G++EGE+I
Sbjct: 237 -IEG-KVKQMAAGLDHSLFLTEEGEVYSCGWGADGQTGLGHYESEHRPTKLLGDMEGEKI 294
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
++++ DC LAVS+KG++FGWGNSEY Q++ Q++ PR+L V + V VA G
Sbjct: 295 TQVATFADCCLAVSEKGELFGWGNSEYNQLASVTETTQVNVPRLLP-FDYVGKAVQVAVG 353
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LND+G VY WGYG+LG+GP + + P +P LFGQ+ FNP V+ + AG
Sbjct: 354 GTICAVLNDQGQVYVWGYGILGKGPNLEETPIPEQLPEALFGQNDFNPDVTVKEIKAGLN 413
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+F A+T G LY WG N+YG LGLG + DQ FP +V++ G
Sbjct: 414 SFAAVTTSGDLYTWGVNKYGCLGLGHLNDQYFPWRVSLPG 453
>gi|345801217|ref|XP_546911.3| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Canis lupus familiaris]
Length = 518
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H K K E V+ +PL
Sbjct: 162 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPL 220
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++++TD EG F+ GNN++GQCGR +V+ E Y + +
Sbjct: 221 PLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQ 280
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH + P + G++ G +
Sbjct: 281 DFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNV 339
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS +G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 340 VQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQAACG 398
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP V + G
Sbjct: 399 GTGCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLS 458
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 459 HFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 499
>gi|326931189|ref|XP_003211716.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like [Meleagris gallopavo]
Length = 371
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 224/340 (65%), Gaps = 8/340 (2%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP-RKKGNPLELVMSFVRIPLP 62
IT ACGYGFT++++ + D K++G GLN DSQLG+ R + E V+ IPLP
Sbjct: 17 ITSAACGYGFTLLSSNTTDIT-KVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLP 75
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ P T++ ++ GRAH++++TD+EG FT GNNS+GQCGR +V++E Y H + D
Sbjct: 76 LEKPQKTRVLQVSCGRAHSLILTDSEGVFTMGNNSYGQCGRKVVEDEVYSESHLIHQLND 135
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ +++ VCGQDH+LF T+ G V++CGWGADGQTGLGH N P + G+I G I+
Sbjct: 136 FD-SRVVQVVCGQDHSLFRTKKGDVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNII 194
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
++SS DC LAVSD+GD+FGWGNSEY Q++ Q++ P+ L + +I + A GG
Sbjct: 195 QVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPKHLP--FRIGKIKEAACGG 252
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +L +EG V+ WGYG+LG+GP ++ + P +IP +LFG F+P +V + G
Sbjct: 253 TGNIVLTEEGSVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSPDVRVARVRCGLSH 312
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 313 FAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGE 352
>gi|148234769|ref|NP_001090058.1| uncharacterized protein LOC735132 [Xenopus laevis]
gi|66911611|gb|AAH97888.1| MGC115671 protein [Xenopus laevis]
Length = 449
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 223/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ + + K++G GLN DSQ+G+H R+ + E ++ +PL
Sbjct: 93 KISSAACGYGFTLLSSKTANIS-KIWGMGLNKDSQIGFHRSRRDRTKGYEYILEPSPVPL 151
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++++TD EG F+ GNNS+GQC R +++ E Y H +
Sbjct: 152 PLDKPQETKVLQVSCGRAHSLILTDKEGVFSMGNNSYGQCAREVIEGEIYSESQLIHRVK 211
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L+ ++ CGQDH+LF TE G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 212 ELD-NTVVQVACGQDHSLFRTEKGEVYSCGWGADGQTGLGHFNVCSNPTKLGGDMAGVNI 270
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS++G +FGWGNSEY Q++ Q++ PR L + V R+ VA G
Sbjct: 271 MQVATYGDCCLAVSEEGQLFGWGNSEYMQLACVTDSTQVNVPRYLP-FQHVGRVKQVACG 329
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +N++G V+ WGYG+LG+GP + +P +IP +LFG FNP +V + +G
Sbjct: 330 GTGCIAVNEDGSVFVWGYGILGKGPNFLEAQQPEMIPPSLFGLSDFNPDIRVTRVFSGLG 389
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+ N G L++WGKN G LG G EDQ FP +V V G+
Sbjct: 390 HFAAMNNRGELFVWGKNLRGCLGTGRFEDQYFPWRVTVPGE 430
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 125 EKIMDAVCGQDHTLFLTESG---KVYSCGWGADGQTGLGHLNNQETP-----------CL 170
EKI A CG TL +++ K++ G D Q G T L
Sbjct: 92 EKISSAACGYGFTLLSSKTANISKIWGMGLNKDSQIGFHRSRRDRTKGYEYILEPSPVPL 151
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ---ISTPRVLSQCK 227
+ + +++++S L ++DK VF GN+ YGQ + ++ S +++ + K
Sbjct: 152 PLDKPQETKVLQVSCGRAHSLILTDKEGVFSMGNNSYGQCAREVIEGEIYSESQLIHRVK 211
Query: 228 GV-SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVSRSMKPTLIPSTLFGQHQF 284
+ + +V VA G ++G VYS G+G GQ + PT + + G +
Sbjct: 212 ELDNTVVQVACGQDHSLFRTEKGEVYSCGWGADGQTGLGHFNVCSNPTKLGGDMAGVN-- 269
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
++ G C A++ G L+ WG ++Y QL T Q
Sbjct: 270 ----IMQVATYGDCCL-AVSEEGQLFGWGNSEYMQLACVTDSTQ 308
>gi|390337940|ref|XP_791025.3| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog isoform 2 [Strongylocentrotus purpuratus]
gi|390337942|ref|XP_003724679.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog isoform 1 [Strongylocentrotus purpuratus]
Length = 509
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIP 60
KIT ACGYGF+++ + ++D + K++G G+N++SQ+GYH P+ + + ++S I
Sbjct: 153 KITTAACGYGFSLIGSHTQDTS-KVWGMGINTNSQIGYH-PKAMTSVEGMHTIISPTEIN 210
Query: 61 LPVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
LP+ P T++ ++ GR+H++++TD EG + GNNS GQCGR I+ EDY H I
Sbjct: 211 LPLTKPRKTRVSQVSCGRSHSLILTDEEGEYRLGNNSHGQCGRPIIPLEDYSSNKIIHKI 270
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+EG KI CG DH+LFLTE G VYSCGWGADGQTGLGH + TP + G+I+ E
Sbjct: 271 GGIEG-KIKQISCGHDHSLFLTEDGHVYSCGWGADGQTGLGHFEDTSTPTRLEGDIKDEH 329
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVAS 237
I ++++ DC LA+SDKG++FGWGNSEY Q+ + Q+ TP L KG+ +I A+
Sbjct: 330 ITQITTLADCCLAISDKGELFGWGNSEYNQLKCVTEDTQVYTPTHLP-FKGIGKITSAAT 388
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
GG+ C + N+ G V+ WGYG LG+GPK++ + P I TLFG+ + V + G
Sbjct: 389 GGTICALTNESGEVWVWGYGFLGRGPKLTDTAVPECIDMTLFGKSRRRTDIAVTKVWCGH 448
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G LY WG N G LGLG + Q FPLKV++ GQ
Sbjct: 449 HYFAAVTNNGDLYTWGTNGSGCLGLGQLHSQYFPLKVSLPGQ 490
>gi|241686129|ref|XP_002412816.1| williams-Beuren syndrome chromosomal region 16 protein, putative
[Ixodes scapularis]
gi|215506618|gb|EEC16112.1| williams-Beuren syndrome chromosomal region 16 protein, putative
[Ixodes scapularis]
Length = 467
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 225/346 (65%), Gaps = 10/346 (2%)
Query: 1 MIKITDIACGYGFTVV-ATKSKDKNL-KLFGCGLNSDSQLGYHDPRKKGN--PLELVMSF 56
+ K+ D+ACGYGFT+ A + K K+ ++FG G+N+D QLGY RK P L
Sbjct: 106 VFKVEDVACGYGFTIFSALEDKVKSSHRVFGTGINTDFQLGYQCVRKGKYFWPSTLYSEE 165
Query: 57 -VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
V I LP++ +T+I +A GR+HT+V+TD EGAF+ GNN+FGQCG V E +
Sbjct: 166 PVPIALPLRSEATRIVRVACGRSHTVVLTDREGAFSLGNNAFGQCGYPAVPNEKRKNDGT 225
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ + + + ++D CGQDHTLFLT SGKV+SCGWGADGQ GLG+ +Q P V+G++
Sbjct: 226 VYRVEGIP-DDVLDVACGQDHTLFLTSSGKVFSCGWGADGQLGLGNTLSQGMPRQVKGDL 284
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIV 233
+G++IV+L+ +VDC+LAVS+ GD+FGWG+SEYGQ +E Q+S R L G R
Sbjct: 285 DGQKIVQLAGSVDCILAVSESGDLFGWGSSEYGQFGRQTNEKQVSEARHLGFPYGKVRF- 343
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
ASG + C ++N+ G VY WGYGLLG GP+VS PTL+P LFG +F+P +V L
Sbjct: 344 -AASGATMCGVVNEAGDVYVWGYGLLGLGPEVSFRSSPTLLPRPLFGAGRFSPDVQVAQL 402
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
G F A+T+ G LY WGKN+ G LGLG DQ FP +V++ +
Sbjct: 403 YCGLGHFAAVTDKGGLYTWGKNRNGCLGLGHPLDQHFPFRVSIAAE 448
>gi|170045507|ref|XP_001850348.1| williams-Beuren syndrome chromosome region 16 protein [Culex
quinquefasciatus]
gi|167868522|gb|EDS31905.1| williams-Beuren syndrome chromosome region 16 protein [Culex
quinquefasciatus]
Length = 452
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/347 (44%), Positives = 223/347 (64%), Gaps = 18/347 (5%)
Query: 6 DIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR-KKGNPLELVMSFVRIPLPVK 64
D+A GYGF+ AT + L+G G+N+D+Q+G+H ++ P EL++ P PV
Sbjct: 92 DVAAGYGFSSFATACRGGK-SLWGTGINTDAQIGFHKLGGQQRKPFELLI----YPAPVD 146
Query: 65 HPST-------QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
S QI +A GRAH + + ++ + GNNS+GQCGR I+++EDY + H
Sbjct: 147 LASVAGNNSEVQIVRVAAGRAHQLAVGEDGTVYALGNNSYGQCGREIIKDEDYFNQATIH 206
Query: 118 NIADLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
I DL G + + + CGQDH+ FLT SG+++SCGW DGQTG G TP LV G++
Sbjct: 207 RIKDLGGTDDPVKEVDCGQDHSFFLTRSGRLFSCGWSDDGQTGQGRFGLVSTPGLVEGDL 266
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRI 232
+ E + K++ + D VLA++D+G+VFGWGN+EYGQ+ + QI++PR L+ + RI
Sbjct: 267 KNEVVTKVTGSSDTVLALNDRGEVFGWGNTEYGQLLPDGDETPQINSPRHLTFLQDCGRI 326
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
VD+A+GGS C LN+ G V++WGYG+LG GP+V +P LIP+TLFG++ FNP S+V +
Sbjct: 327 VDIAAGGSYCLALNEAGDVFAWGYGILGFGPEVVHQPRPRLIPATLFGRNDFNPTSRVRA 386
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+ G GAIT+ LYMWG N++G LG G +DQ FPLKVAV +
Sbjct: 387 IYCGLTHSGAITDGDDLYMWGHNRHGCLGFGDRKDQFFPLKVAVSAR 433
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIA G + + ++ D + +G G+ H PR + P L F R
Sbjct: 325 RIVDIAAGGSYCLALNEAGD--VFAWGYGILGFGPEVVHQPRPRLIPATL---FGRNDF- 378
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+P+++++ + G H+ ITD + + +G+N G G G D + ++F +A
Sbjct: 379 --NPTSRVRAIYCGLTHSGAITDGDDLYMWGHNRHGCLGFG-----DRKDQFFPLKVA-- 429
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
++M CG DHTL L +
Sbjct: 430 VSARVMKISCGVDHTLALCRA 450
>gi|157121561|ref|XP_001659905.1| regulator of chromosome condensation [Aedes aegypti]
gi|108874634|gb|EAT38859.1| AAEL009303-PA [Aedes aegypti]
Length = 456
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 215/346 (62%), Gaps = 11/346 (3%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR-KKGNPLELVMSFVRIPLP 62
I D+A GYGF+V A K + L+G G+N+D+Q+GYH K P E+++ I L
Sbjct: 93 IVDVAAGYGFSVFAAKCRHGK-SLWGTGINTDAQIGYHKLGGKHRKPFEMLIYPAPIDLA 151
Query: 63 V---KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ +I + GRAHT+ + ++ + FG+N++GQCGR IV+ EDY + I
Sbjct: 152 AVEGNEKAVEIVKVTAGRAHTLALANDGVVYAFGSNAYGQCGREIVRGEDYFNAPVINRI 211
Query: 120 ADLEGEK---IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
DL G K I++ CGQDH+ F T SG++YSCGW DGQTG G TP V G+++
Sbjct: 212 TDLGGRKDDPIVEVDCGQDHSFFRTASGRLYSCGWSDDGQTGQGRFGKVSTPSQVEGDLK 271
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV 233
GE + K++ D VLA++DKG+VFGWGN+EYGQ+ S+ QI+ P LS K +IV
Sbjct: 272 GETVCKVTGTSDTVLALTDKGEVFGWGNTEYGQLATDSDENPQINLPMHLSFLKDCGKIV 331
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
D+A+GGS C +LN+ G V+SWGYG+LG GP V +PT IP LFG++ FNP +V ++
Sbjct: 332 DIAAGGSFCMVLNENGDVFSWGYGILGFGPDVGHQARPTQIPPALFGRNDFNPNVRVRAI 391
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
AG AI + LYMWG N+YG LG G DQ FPLKVAV +
Sbjct: 392 SAGLIHSAAINDQDDLYMWGHNRYGCLGFGHKNDQFFPLKVAVSAR 437
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-----HDPRKKGNPLELVMSFV 57
KI DIA G F +V ++ D + +G G+ LG+ H R P L F
Sbjct: 329 KIVDIAAGGSFCMVLNENGD--VFSWGYGI-----LGFGPDVGHQARPTQIPPAL---FG 378
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R +P+ +++ ++ G H+ I D + + +G+N +G G G ++ +F
Sbjct: 379 RNDF---NPNVRVRAISAGLIHSAAINDQDDLYMWGHNRYGCLGFGHKNDQ-----FFPL 430
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTES 143
+A ++M CG DHTL L ++
Sbjct: 431 KVA--VSARVMKISCGVDHTLALCKA 454
>gi|55926158|ref|NP_001007510.1| Williams-Beuren syndrome chromosome region 16 [Xenopus (Silurana)
tropicalis]
gi|51258185|gb|AAH79946.1| Williams-Beuren syndrome chromosome region 16 [Xenopus (Silurana)
tropicalis]
Length = 449
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 222/341 (65%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ + K++G GLN DSQ+G+H R+ + E ++ IPL
Sbjct: 93 KISSAACGYGFTLLSSKTANIT-KIWGMGLNKDSQIGFHRSRRDRTKGYEYILEPSPIPL 151
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++++TD EG F+ GNNS+GQC R +++ E Y H +
Sbjct: 152 PLDKPQETKVLQVSCGRAHSLILTDKEGVFSLGNNSYGQCAREVIEGEIYSESQLIHRVR 211
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L+ +++ CGQDH+LF TE G+VYSCGWGADGQTGLGH N P + G++ G I
Sbjct: 212 ELD-SRVVQVACGQDHSLFRTEKGEVYSCGWGADGQTGLGHFNVCSNPTKLGGDMAGVNI 270
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS++G ++GWGNSEY Q++ Q++ P+ L + V ++ VA G
Sbjct: 271 VQVATYGDCCLAVSEEGQLYGWGNSEYLQLACVTDSTQVNVPQHLP-FQHVGKVKHVACG 329
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +N +G V+ WGYG+LG+GP + +P +IP +LFG FNP +V + +G
Sbjct: 330 GTGCIAVNGDGSVFVWGYGILGKGPNFLEAQQPEIIPQSLFGLSDFNPDIRVTKVFSGLG 389
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+ N G L++WGKN G LG G EDQ FP +V V G+
Sbjct: 390 HFAALNNRGELFVWGKNLRGCLGTGRFEDQYFPWRVTVPGE 430
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 125 EKIMDAVCGQDHTLFLTESG---KVYSCGWGADGQTGLGHLNNQETP-----------CL 170
EKI A CG TL +++ K++ G D Q G T L
Sbjct: 92 EKISSAACGYGFTLLSSKTANITKIWGMGLNKDSQIGFHRSRRDRTKGYEYILEPSPIPL 151
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ---ISTPRVLSQCK 227
+ + +++++S L ++DK VF GN+ YGQ + ++ S +++ + +
Sbjct: 152 PLDKPQETKVLQVSCGRAHSLILTDKEGVFSLGNNSYGQCAREVIEGEIYSESQLIHRVR 211
Query: 228 GV-SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVSRSMKPTLIPSTLFGQHQF 284
+ SR+V VA G ++G VYS G+G GQ + PT + + G
Sbjct: 212 ELDSRVVQVACGQDHSLFRTEKGEVYSCGWGADGQTGLGHFNVCSNPTKLGGDMAG---- 267
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
+ V+ G C A++ G LY WG ++Y QL T Q
Sbjct: 268 --VNIVQVATYGDCCL-AVSEEGQLYGWGNSEYLQLACVTDSTQ 308
>gi|344240759|gb|EGV96862.1| Williams-Beuren syndrome chromosomal region 16 protein-like
[Cricetulus griseus]
Length = 331
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/313 (47%), Positives = 207/313 (66%), Gaps = 6/313 (1%)
Query: 31 GLNSDSQLGYHDPRK-KGNPLELVMSFVRIPLPVKHP-STQIKHLATGRAHTIVITDNEG 88
GLN DSQLG+H RK K E V+ +PLP+ P T++ ++ GRAH++++TD EG
Sbjct: 2 GLNKDSQLGFHRSRKDKTRGYEYVLEPAPVPLPLDRPQETKVLQVSCGRAHSLILTDREG 61
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
F+ GNNS GQCGR +V++E Y H + D +G+ ++ VCGQDH+LFLT G+VYS
Sbjct: 62 VFSMGNNSHGQCGRKVVEDEVYSESHTVHRMQDFDGQ-VVQVVCGQDHSLFLTNKGEVYS 120
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CGWGADGQTGLGH N TP + G++ G ++++++ DC LAVS G VFGWGNSEY
Sbjct: 121 CGWGADGQTGLGHYNITSTPTKLAGDLAGVTVIQVATYGDCCLAVSSDGGVFGWGNSEYL 180
Query: 209 QISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
Q++ Q++ PR L + V ++ VA GG+ C +LN+EG V+ WGYG+LG+GP +
Sbjct: 181 QLASVTDSTQVNVPRCLPFSE-VGKVKQVACGGTGCAVLNEEGHVFVWGYGILGKGPNLL 239
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ P +IP TLFG +FNP +V + G F A+TN G L++WGKN G LG+G +E
Sbjct: 240 ETALPEMIPPTLFGLTEFNPHIQVSQIRCGLSHFAALTNNGELFVWGKNIRGCLGIGRLE 299
Query: 327 DQPFPLKVAVGGQ 339
DQ FP +V + G+
Sbjct: 300 DQYFPWRVTMPGE 312
>gi|195350203|ref|XP_002041631.1| GM16641 [Drosophila sechellia]
gi|194123404|gb|EDW45447.1| GM16641 [Drosophila sechellia]
Length = 434
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 222/353 (62%), Gaps = 40/353 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFTV A ++D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 87 EITDVAAGYGFTVYAV-NRDDGETLFGSGLNTDSQLGF---QVKGNPNDPANLDVIIYPT 142
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP T ++K ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 143 AIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKS 202
Query: 114 WFCHNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H I+ D+ G ++++ CGQDH++FLT+ G++Y+CGWGADGQTG G+ +
Sbjct: 203 ALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQIT 262
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQC 226
L+ G++E E+IV+LS + DCVLA+++ GD FGWGNSEYGQ+ +SE+ QI+ PR L
Sbjct: 263 LIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLT 322
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
K + +I DVA+GGS C LND+GLVY+WG+G+LG GP + PS
Sbjct: 323 KSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGP---FQRNNSGFPSG--------- 370
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
G GA+ + G L+MWGKN++G LGLG +DQ FP K A+ G+
Sbjct: 371 --------CGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGK 415
>gi|312379826|gb|EFR25987.1| hypothetical protein AND_08222 [Anopheles darlingi]
Length = 398
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 219/355 (61%), Gaps = 30/355 (8%)
Query: 4 ITDIACGYGFTVVAT------KSKDKNLKLFGCGLNSDSQLGYHD---PRKKGNPLELVM 54
+TDIA GYGFTV A + + + L+G G+N+D QLG P KK PLEL++
Sbjct: 30 VTDIASGYGFTVFAVDPSRSKRPESTDCPLWGTGINTDGQLGLQKAPGPHKK--PLELLI 87
Query: 55 SFVRIPLPVK------HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE 108
P PV S++I +A GRAH + +TD+ GNN++GQCGR I+ +E
Sbjct: 88 ----YPAPVDLSSVSGATSSRIAQVAAGRAHLLALTDSGTVLALGNNAYGQCGRRIIADE 143
Query: 109 DYQGKWFCHNIADLEGEKIMDAV----CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
DY G + IA +KI D + CGQDH+L +TE G+V+SCGW DGQTG G
Sbjct: 144 DYFGNPIVNVIA--LPQKIDDPIKAIACGQDHSLLVTEGGRVFSCGWSDDGQTGQGRYGL 201
Query: 165 QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE---SEMQISTPR 221
+T V G+I+ ERIVK++S D VLA++DKG++FGWGNSEYGQ+ E QI+TPR
Sbjct: 202 IDTVGPVEGDIKNERIVKVASTCDTVLAINDKGELFGWGNSEYGQLGEVADDNPQINTPR 261
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
L+ K +++D+A+ GS C LN+ G V++WGYG+LG GP V PTLIP TLFG+
Sbjct: 262 RLTFSKHCGKLIDIAAAGSYCLALNENGDVFAWGYGILGFGPNVQHQPAPTLIPPTLFGR 321
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++F P ++V ++ G AI + LYMWG N+Y LGLG DQ FP KVA+
Sbjct: 322 NEFAPNTRVVAIACGVTHSAAINDQHDLYMWGHNRYACLGLGHKNDQYFPFKVAI 376
>gi|118777951|ref|XP_308369.3| AGAP007506-PA [Anopheles gambiae str. PEST]
gi|116132148|gb|EAA04658.3| AGAP007506-PA [Anopheles gambiae str. PEST]
Length = 455
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 216/348 (62%), Gaps = 21/348 (6%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD---PRKKGNPLELVMSFVRIP 60
+ D+A GYGFTV + D +++G G+N+D QLG P KK PLEL + P
Sbjct: 98 VADVAAGYGFTVYVVEKSD-GPEVWGTGINTDGQLGVQKAPGPHKK--PLELTI----YP 150
Query: 61 LPVKHPST------QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
P+ S ++ ++ GRAH + +T++ +GNN++GQCGR IV EEDY
Sbjct: 151 APIDLSSAKTEQRNRVVQVSAGRAHVLALTEDGSVLAWGNNAYGQCGRKIVTEEDYFRNP 210
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+ I LE E + CGQDH+L LT++G+VYSCGW DGQ G G +TP G+
Sbjct: 211 VVNTIR-LE-EPVQAIECGQDHSLMLTKAGRVYSCGWSDDGQAGQGRYGLIDTPGPAEGD 268
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ---ISESEMQISTPRVLSQCKGVSR 231
++GER+VK+SS+ D +LA++DKGD+FGWGNSEYGQ +++ QI+ PR L K +
Sbjct: 269 MKGERVVKVSSSCDTILAINDKGDLFGWGNSEYGQLGDVAQDNPQINIPRYLPFAKECGK 328
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
IVD+A+ GS C LN+ G V+SWGYG+LG GP+V PT IP LFG+++F+P +KV
Sbjct: 329 IVDIAAAGSYCLALNEHGDVFSWGYGILGFGPEVQHRPTPTRIPPALFGRNEFSPNAKVI 388
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
S+ G AI + LYMWG N+Y LGLG DQ FPLKVA+ +
Sbjct: 389 SIACGITHSAAINDQHDLYMWGHNRYACLGLGHKNDQFFPLKVALNAR 436
>gi|403286030|ref|XP_003934310.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
[Saimiri boliviensis boliviensis]
Length = 523
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 222/354 (62%), Gaps = 21/354 (5%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPLP 62
I+ ACGYGFT++++K++D K++G GLN DSQLG+H RK K E V+ +PLP
Sbjct: 154 ISSAACGYGFTLLSSKTRDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 212
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFG--NNSFGQCGRGIVQE-EDYQGKWF--- 115
+ P T++ +A GRAH++V+TD EG G ++ G G+G+ D+ +F
Sbjct: 213 LDRPQETRVLQVACGRAHSLVLTDREGVTVSGWMDHQLGVTGKGLPSACHDHVSCFFPTF 272
Query: 116 --------CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
H + D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N T
Sbjct: 273 PGCSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITST 331
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQ 225
P + G++ G I+++++ DC LAVS G +FGWGNSEY Q+S Q++ PR L
Sbjct: 332 PTKLGGDLAGVNILQVATYGDCCLAVSTDGGLFGWGNSEYLQLSSVTDSTQVNVPRCL-H 390
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
GV ++ A GG+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FN
Sbjct: 391 FSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAIPEMIPPTLFGLTEFN 450
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
P+ +V + G F A+T+ G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 451 PEVRVSRIRCGLSHFAALTSGGELFVWGKNTRGCLGIGRLEDQYFPWRVTMPGE 504
>gi|198414405|ref|XP_002127666.1| PREDICTED: similar to Williams-Beuren syndrome chromosome region 16
homolog [Ciona intestinalis]
Length = 450
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 222/347 (63%), Gaps = 16/347 (4%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH---DPRKKGNP----LELVMSF 56
I+ CGYGF++ N+ + CG+N+DSQ+G+H D + + P VM
Sbjct: 90 ISSFDCGYGFSMFCGNQSGSNV--WACGINTDSQIGFHKYQDEKHEKMPNNQYYNYVMKP 147
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+ +PLP+K S+++ ++ GRAH++++TD E FT GNN+FGQCGR I+ E Y+G
Sbjct: 148 LPLPLPLKGKSSKVLDVSCGRAHSVILTD-EAIFTVGNNAFGQCGRRIIDGEIYEGSQKI 206
Query: 117 HNIADLE-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ I G K+ CG DHT+FLT+ GKV++CGWGADGQTGLG E P V+ ++
Sbjct: 207 NRIPHEHFGSKVAKVFCGMDHTMFLTKEGKVFTCGWGADGQTGLGQFECTEIPTEVKSDL 266
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ---ISESEMQISTPRVLSQCKGVSRI 232
EG +I +LS+ D LA+SD+ +V+GWGNSEY Q ++ES Q++ P+ L K S++
Sbjct: 267 EGVKITQLSTFSDTSLALSDEHEVYGWGNSEYDQLGCVTES-TQLTYPKKLP-FKLPSKV 324
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
V VA+GG+A +L+ G VY WG+G+LG+GP + + PT IP TLFG+++FN KV S
Sbjct: 325 VQVAAGGTAFLLLDGNGDVYVWGHGILGKGPNLESTSWPTKIPPTLFGRNEFNLDVKVVS 384
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+ G F A+TN G L+ WGKN+ G LG+GT DQ FP KV +G +
Sbjct: 385 ITCGLGHFAAVTNKGELFTWGKNRNGCLGIGTHSDQYFPWKVLIGAE 431
>gi|405952428|gb|EKC20241.1| Williams-Beuren syndrome chromosomal region 16-like protein
[Crassostrea gigas]
Length = 492
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 206/342 (60%), Gaps = 37/342 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN-PLELVMSFVRIPLPVKH 65
+ CGYGFT + K +D+ KL+GCG+N+DSQLG+H +K + L+ + V IPLP++
Sbjct: 160 VDCGYGFTALILKGRDRKSKLYGCGINTDSQLGFHKSSEKPDMVLDYITEPVLIPLPLED 219
Query: 66 P-STQIKHLATGRAHTIVITDNEG---AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P S+++ ++ GRAHT+V+T EG A F + CG V
Sbjct: 220 PDSSEVIDVSCGRAHTVVLT-TEGVYLALLFLASMLNPCGEDCV---------------- 262
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
VCGQDHT +LT G+VYSCG GADGQTGL H + + P LVRG+IEGE+IV
Sbjct: 263 --------VVCGQDHTFYLTSGGQVYSCGLGADGQTGLQHYHCEWKPSLVRGDIEGEKIV 314
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
++SS DCVLAVS++GD+FGWGNSEYGQ+S + Q+S PR L +S+ A+ G
Sbjct: 315 QISSKGDCVLAVSERGDLFGWGNSEYGQLSAITDQTQVSVPRNLPLPHSISK---AAAAG 371
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
S C +L D+ V WG+G LG GP V+ S P IP TLFG+++ P V+ + G
Sbjct: 372 SKCAVLTDKNDVLVWGFGALGVGPNVTTSSTPQTIPPTLFGRNEMAPDKLVKDITCGINH 431
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVE--DQPFPLKVAVGGQ 339
F A TN +Y+WGKNQ G LG+ + DQ +P +V+V +
Sbjct: 432 FAARTNDFEMYVWGKNQKGCLGIYVAQQLDQSYPFRVSVPAE 473
>gi|47214659|emb|CAG00895.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 213/346 (61%), Gaps = 12/346 (3%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
+I+ ACGYGFT++A+++KD +KL+G GLN DSQLG+ ++ + + E V+ + L
Sbjct: 95 QISSAACGYGFTLIASRTKDV-IKLWGMGLNKDSQLGFQRTQQSRLDSYEYVLEPSPVAL 153
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TDNEG F+ GNN++GQCGR +V++E Y G H I
Sbjct: 154 PLAEPQQTRVLQVSCGRAHSLVLTDNEGVFSMGNNAYGQCGRRVVEDEVYSGSHVIHRIE 213
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGER 179
++ CGQDH+LFLT++G+V +CGWGADGQTGL L+ T LV G E
Sbjct: 214 GFR-SPVVQVACGQDHSLFLTQTGQVLACGWGADGQTGLCGLSVVSTLVSLVSGLSGVES 272
Query: 180 IVKLSSAVDCVLAVSDKGDVF--GWGNSEYGQISESEM----QISTPRVLSQCKGVSRIV 233
+ LS D S +G S +S + + QI++PR L +G ++V
Sbjct: 273 LSDLSGIGDLWSLWSWSHWSLCSRYGVSLVTLVSLASVTQVTQINSPRHLP-VEGCGKVV 331
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
A GG+ +LND+G V+ WGYG+LG+GP +S S P +IPSTLFG+ FNP + V +
Sbjct: 332 QAACGGTQVAVLNDKGEVFVWGYGILGKGPNLSESSTPEMIPSTLFGRSDFNPTAAVTRI 391
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
G F A+T+ G L++WGKN G LG+G +DQ FP +V V GQ
Sbjct: 392 RCGLNHFAAVTDGGELFVWGKNIRGCLGIGKRDDQYFPWRVTVPGQ 437
>gi|297288168|ref|XP_001084290.2| PREDICTED: williams-Beuren syndrome chromosomal region 16 protein
isoform 2 [Macaca mulatta]
Length = 466
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 203/343 (59%), Gaps = 9/343 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTTDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIM--DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
D +G+ + D C + F S LGH N P + G++ G
Sbjct: 227 DFDGQVVQLGDFECRKQFKTF-KRSFSTPELAIVKAKDLCLGHYNITSAPTKLGGDLAGV 285
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVA 236
IV++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A
Sbjct: 286 NIVQVTTYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAA 344
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
GG+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 CGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEVQVSRIRCG 404
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 LSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 447
>gi|442746075|gb|JAA65197.1| Putative e3 ubiquitin-protein ligase herc3, partial [Ixodes
ricinus]
Length = 455
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/267 (49%), Positives = 183/267 (68%), Gaps = 8/267 (2%)
Query: 1 MIKITDIACGYGFTVV-ATKSKDKN-LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVR 58
+ K+ D+ACGYGFT+ A + K K+ ++FG G+N+D QLGY RK G+PLE++ V
Sbjct: 193 VFKVEDVACGYGFTIFSALEDKVKSSYRVFGTGINTDFQLGYQCARK-GHPLEVLTEPVP 251
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
I LP++ +T+I +A GR+HT+V+TD EGAF+ GNN+FGQCG V E + +
Sbjct: 252 IALPLRSEATRIVRVACGRSHTVVLTDREGAFSLGNNAFGQCGYPAVPNEKRKNDGTVYR 311
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ + + ++D CGQDHTLFLT SGKV+SCGWGADGQ GLG+ +Q P V+G+++G+
Sbjct: 312 VEGIP-DDVLDVACGQDHTLFLTSSGKVFSCGWGADGQLGLGNTLSQGVPRQVKGDLDGQ 370
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVA 236
+IV+L+ +VDC+LAVS+ GD+FGWG+SEYGQ E Q+S R L G R A
Sbjct: 371 KIVQLAGSVDCILAVSESGDLFGWGSSEYGQFGRQTDEKQVSEARHLGFPYGKVRF--AA 428
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGP 263
SG + C ++N+ G VY WGYGLLG GP
Sbjct: 429 SGATMCGVVNEAGDVYVWGYGLLGLGP 455
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 126 KIMDAVCGQDHTLF------LTESGKVYSCGWGADGQTGL-----GH---LNNQETPCLV 171
K+ D CG T+F + S +V+ G D Q G GH + + P +
Sbjct: 195 KVEDVACGYGFTIFSALEDKVKSSYRVFGTGINTDFQLGYQCARKGHPLEVLTEPVPIAL 254
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKG 228
E RIV+++ + ++D+ F GN+ +GQ + + + + +G
Sbjct: 255 PLRSEATRIVRVACGRSHTVVLTDREGAFSLGNNAFGQCGYPAVPNEKRKNDGTVYRVEG 314
Query: 229 V-SRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQF 284
+ ++DVA G L G V+S G+G LG G +S+ + P + L GQ
Sbjct: 315 IPDDVLDVACGQDHTLFLTSSGKVFSCGWGADGQLGLGNTLSQGV-PRQVKGDLDGQKIV 373
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
V+ ++A ++ G L+ WG ++YGQ G T E Q
Sbjct: 374 QLAGSVDCILA-------VSESGDLFGWGSSEYGQFGRQTDEKQ 410
>gi|432092207|gb|ELK24833.1| Williams-Beuren syndrome chromosomal region 16 protein [Myotis
davidii]
Length = 319
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 183/292 (62%), Gaps = 18/292 (6%)
Query: 31 GLNSDSQLGYHDPRK-KGNPLELVMSFVRIPLPVKHP-STQIKHLATGRAHTIVITDNEG 88
GLN DSQLG+H RK K E V+ +PLP+ P T++ ++ GRAH++V+TD+EG
Sbjct: 2 GLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDSEG 61
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
F+ GNNS+GQCGR +V++E Y H + D +G+ ++ CGQDH+LFLT+ G+VYS
Sbjct: 62 VFSMGNNSYGQCGRKVVEDEIYSESHKVHRMQDFDGQ-VVQVTCGQDHSLFLTDKGEVYS 120
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CGWGADGQTGLGH N P + G++ G ++V++++ DC LAVS GD+FGWGNSEY
Sbjct: 121 CGWGADGQTGLGHYNITSVPTKLGGDLAGVKVVQVATYGDCCLAVSADGDLFGWGNSEYL 180
Query: 209 QISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL------------VYSW 254
Q++ Q++ PR L GV ++ A GG+ C +LN E L V+ W
Sbjct: 181 QLASVTDSTQVNVPRCLP-FSGVGKVKQAACGGTGCAVLNGETLLQSHCSALGEGHVFVW 239
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
GYG+LG+GP + + P ++P TLFG +FNP +V + G F A+T
Sbjct: 240 GYGILGKGPNLVETALPEMVPPTLFGLTEFNPDVQVSRIRCGLSHFAALTRL 291
>gi|297680186|ref|XP_002817884.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Pongo abelii]
Length = 423
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 196/339 (57%), Gaps = 44/339 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRIHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G ++ CGQDH+LFLT+ G+VYSCGWGADGQTG R+
Sbjct: 227 DFDGH-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTG--------------------RV 265
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V + WG +S + + PR L GV ++ A GG+
Sbjct: 266 VFMH-----------------WGRESSQPVSCGAVNV--PRCL-HFSGVGKVRQAACGGT 305
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G F
Sbjct: 306 GCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLREFNPEIQVSRIRCGLSHF 365
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 366 AALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 404
>gi|410170545|ref|XP_003959972.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
[Homo sapiens]
Length = 320
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 189/302 (62%), Gaps = 10/302 (3%)
Query: 45 KKGNPLELVMSFVRIP---LPVKHPSTQIKHLATGRAHTIVITDNE--GAFTFGNNSFGQ 99
K + +L S++ IP LP+ P +++K A A T+ + F+ GNNS+GQ
Sbjct: 3 KSKSSQKLDTSYITIPYTQLPLI-PYSKLKLPAAVLAKTLKVLAVLVLRVFSMGNNSYGQ 61
Query: 100 CGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
CGR +V+ E Y H + D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGL
Sbjct: 62 CGRKVVENEIYSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGL 120
Query: 160 GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQI 217
GH N +P + G++ G ++++++ DC LAVS G +FGWGNSEY Q++ Q+
Sbjct: 121 GHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQV 180
Query: 218 STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPST 277
+ PR L GV ++ A GG+ C +LN EG V+ WGYG+LG+GP + S P +IP T
Sbjct: 181 NVPRCL-HFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPT 239
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
LFG +FNP+ +V + G F A+TN G L++WGKN G LG+G +EDQ FP +V +
Sbjct: 240 LFGLTEFNPEIQVSRIRCGLSRFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 299
Query: 338 GQ 339
G+
Sbjct: 300 GE 301
>gi|397138801|ref|XP_001721623.2| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
[Homo sapiens]
Length = 274
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/252 (47%), Positives = 167/252 (66%), Gaps = 4/252 (1%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F+ GNNS+GQCGR +V+ E Y H + D +G+ ++ CGQDH+LFLT+ G+VYSC
Sbjct: 6 FSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDKGEVYSC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
GWGADGQTGLGH N +P + G++ G ++++++ DC LAVS G +FGWGNSEY Q
Sbjct: 65 GWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQ 124
Query: 210 ISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
++ Q++ PR L GV ++ A GG+ C +LN EG V+ WGYG+LG+GP +
Sbjct: 125 LASVTDSTQVNVPRCL-HFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVE 183
Query: 268 SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
S P +IP TLFG +FNP+ +V + G F A+TN G L++WGKN G LG+G +ED
Sbjct: 184 SAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSRFAALTNKGELFVWGKNIRGCLGIGRLED 243
Query: 328 QPFPLKVAVGGQ 339
Q FP +V + G+
Sbjct: 244 QYFPWRVTMPGE 255
>gi|339248947|ref|XP_003373461.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970414|gb|EFV54355.1| conserved hypothetical protein [Trichinella spiralis]
Length = 496
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 196/333 (58%), Gaps = 16/333 (4%)
Query: 4 ITDIACGYGFTVVATKSKDKNL-KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+ IACG GF++ + + L +G GLN+ SQL + + V+ +PLP
Sbjct: 109 VIGIACGVGFSLFICRERGSKLTAAYGTGLNTYSQLSSQPHSPNNHTMRCVVEPKVLPLP 168
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +P T++ H++ GRAH++V TD EG F+ G+N GQCGR ++ EDYQ H+I D
Sbjct: 169 LSYPEKTKVTHVSCGRAHSLVATDKEGVFSLGSNEHGQCGRPVILNEDYQRSGMVHHIRD 228
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L + + VCG D++L L G VY+ G+G GQ G G + P ++ G+I+ ERIV
Sbjct: 229 LPTD-VKQMVCGFDYSLVLDSEGHVYAFGFGYGGQLGNGTAKSNWKPGMIEGDIKDERIV 287
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGG 239
++SSA DCVLA+SDKGDVFGWGNSE+ Q+ S + Q++ PR L + R+ ++A G
Sbjct: 288 QISSAGDCVLALSDKGDVFGWGNSEFRQLGTSSKQTQVNLPRHLDL--KIGRVKEIACSG 345
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG--- 296
S+C L + ++ WGYG LG GPK + +P L+PSTLFG++ F P+ + G
Sbjct: 346 SSCAALTADTKLFVWGYGPLGLGPKTRFTPQPMLLPSTLFGENAFEPEVHPVRVFGGFNG 405
Query: 297 ----PCTFGA--ITNFGHLYMWGKNQYGQLGLG 323
P T + + LYMWG+N+ G LGLG
Sbjct: 406 VFSSPITSNILLLLDKADLYMWGRNECGFLGLG 438
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 127 IMDAVCGQDHTLFL-TESGKVYSCGWGADGQTGLGHL-------NNQETPCLVRGEI--- 175
++ CG +LF+ E G + +G G L NN C+V ++
Sbjct: 109 VIGIACGVGFSLFICRERGSKLTAAYGT-GLNTYSQLSSQPHSPNNHTMRCVVEPKVLPL 167
Query: 176 -----EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ----C 226
E ++ +S L +DK VF G++E+GQ P +L++
Sbjct: 168 PLSYPEKTKVTHVSCGRAHSLVATDKEGVFSLGSNEHGQCGR-------PVILNEDYQRS 220
Query: 227 KGVSRIVDVAS-------GGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRS-MKPTLIPST 277
V I D+ + G +L+ EG VY++G+G GQ G ++S KP +I
Sbjct: 221 GMVHHIRDLPTDVKQMVCGFDYSLVLDSEGHVYAFGFGYGGQLGNGTAKSNWKPGMI--- 277
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ---PFPLKV 334
+ + V+ AG C A+++ G ++ WG +++ QLG + + Q P L +
Sbjct: 278 ---EGDIKDERIVQISSAGDCVL-ALSDKGDVFGWGNSEFRQLGTSSKQTQVNLPRHLDL 333
Query: 335 AVGGQK 340
+G K
Sbjct: 334 KIGRVK 339
>gi|187957370|gb|AAI57845.1| Williams-Beuren syndrome chromosome region 16 [Homo sapiens]
Length = 267
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 165/250 (66%), Gaps = 4/250 (1%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
GNNS+GQCGR +V+ E Y H + D +G+ ++ CGQDH+LFLT+ G+VYSCGW
Sbjct: 1 MGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDKGEVYSCGW 59
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GADGQTGLGH N +P + G++ G ++++++ DC LAVS G +FGWGNSEY Q++
Sbjct: 60 GADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLA 119
Query: 212 E--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM 269
Q++ PR L GV ++ A GG+ C +LN EG V+ WGYG+LG+GP + S
Sbjct: 120 SVTDSTQVNVPRCL-HFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESA 178
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
P +IP TLFG +FNP+ +V + G F A+TN G L++WGKN G LG+G +EDQ
Sbjct: 179 VPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQY 238
Query: 330 FPLKVAVGGQ 339
FP +V + G+
Sbjct: 239 FPWRVTMPGE 248
>gi|426254677|ref|XP_004021003.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like [Ovis aries]
Length = 267
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 164/250 (65%), Gaps = 4/250 (1%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
GNNS+GQCGR +V+ E Y H + D +G+ ++ CGQDH+LFLT+ G+VYSCGW
Sbjct: 1 MGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDQGEVYSCGW 59
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GADGQTGLGH N TP + G++ G +V++++ DC LAVS G +FGWGNSEY Q++
Sbjct: 60 GADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLA 119
Query: 212 E--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM 269
Q++ PR L GV ++ A GG+ C +LN EG V+ WGYG+LG+GP + +
Sbjct: 120 SVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLLETA 178
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
P +IP TLFG +FNP +V + G F A+TN G L++WGKN G LG+G +EDQ
Sbjct: 179 LPEMIPPTLFGLAEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQY 238
Query: 330 FPLKVAVGGQ 339
FP +V + G+
Sbjct: 239 FPWRVTMPGE 248
>gi|426356575|ref|XP_004045637.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like isoform 3 [Gorilla gorilla gorilla]
Length = 358
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 165/249 (66%), Gaps = 7/249 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSTDGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLND 247
G+ C +LND
Sbjct: 345 GTGCAVLND 353
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 125 EKIMDAVCGQDHTLFLTESG---KVYSCGWGADGQTGLGHLNNQETP-----------CL 170
+KI A CG TL +++ KV+ G D Q G +T L
Sbjct: 107 QKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQC 226
+ R++++S L ++D+ VF GN+ YGQ + E+E+ + RV
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVSRSMKPTLIPSTLFGQHQF 284
++V VA G L D+G VYS G+G GQ + + PT + L G +
Sbjct: 227 DFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVN-- 284
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
++ G C A++ G L+ WG ++Y QL
Sbjct: 285 ----VIQVATYGDCCL-AVSTDGGLFGWGNSEYLQL 315
>gi|26251886|gb|AAH40695.1| WBSCR16 protein [Homo sapiens]
Length = 358
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 165/249 (66%), Gaps = 7/249 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLND 247
G+ C +LND
Sbjct: 345 GTGCAVLND 353
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 125 EKIMDAVCGQDHTLFLTESG---KVYSCGWGADGQTGLGHLNNQETP-----------CL 170
+KI A CG TL +++ KV+ G D Q G +T L
Sbjct: 107 QKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQC 226
+ R++++S L ++D+ VF GN+ YGQ + E+E+ + RV
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVSRSMKPTLIPSTLFGQHQF 284
++V VA G L D+G VYS G+G GQ + + PT + L G +
Sbjct: 227 DFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVN-- 284
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
++ G C A++ G L+ WG ++Y QL
Sbjct: 285 ----VIQVATYGDCCL-AVSADGGLFGWGNSEYLQL 315
>gi|426258316|ref|XP_004022760.1| PREDICTED: LOW QUALITY PROTEIN: Williams-Beuren syndrome
chromosomal region 16 protein homolog [Ovis aries]
Length = 481
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 197/342 (57%), Gaps = 12/342 (3%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGF + ++K+KD +K++G LN D+QL +H K K E + +PL
Sbjct: 128 KISSAACGYGFXL-SSKTKDI-MKVWGMRLNKDAQLRFHRSLKDKMRGXEYGLEPSPVPL 185
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P ++ ++ GRAH +V+TD E F+ GNNS+GQ GR +V+ E Y H +
Sbjct: 186 PLGRPQEMRVLQVSCGRAHLLVLTDGESVFSMGNNSYGQYGRKVVKNEIYSESHKVHRMQ 245
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ + A CGQDH LFLT G+VYSCG QTGLGH + P + G++ G +
Sbjct: 246 DFDGQMVXIA-CGQDHCLFLTNKGEVYSCGRVTGVQTGLGHCDITSIPTNLGGDLAGVNV 304
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++ + +C L V G +F GNSEY ++ Q++ L GV+ + G
Sbjct: 305 IQVDTYGNCCLVVLASGGLFRXGNSEYLHLASVTDSRQVNVSWCLP-FSGVAWVKQAVLG 363
Query: 239 -GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G+ CT+LN EG V+ WGYG+LG+G + + +IP TLFG +FNP+ +V + G
Sbjct: 364 EGAGCTVLNREGHVFVWGYGILGKGANLLETSLSEMIPPTLFGLMEFNPEVQVSRICCGF 423
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++ GKN G LG EDQ FP ++ + G+
Sbjct: 424 GHFAALTNRGELFVXGKNIQGCLG---XEDQYFPWRLTIPGE 462
>gi|40215465|gb|AAR82741.1| SD03439p [Drosophila melanogaster]
Length = 332
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 160/237 (67%), Gaps = 20/237 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-----LELVMSFV 57
+ITD+A GYGFTV A ++D LFG GLN+DSQLG+ + KGNP L++++
Sbjct: 91 EITDVAAGYGFTVYAV-NRDDGETLFGSGLNTDSQLGF---QVKGNPNDPANLDVIIYPT 146
Query: 58 RIPLPVKHPST----QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
I LP T ++K ++ GRAH +V+T N FT GNNS+GQCGR I++EE Y
Sbjct: 147 AIKLPRVQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKS 206
Query: 114 WFCHNIA--DLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
H I+ D+ G ++++ A CGQDH++FLT+ G++Y+CGWGADGQTG G+ +
Sbjct: 207 ALIHRISQEDICGKEDEVVQAECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQIT 266
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVL 223
L+ G++E E+IV+LS + DCVLA+++ GD FGWGNSEYGQ+ +SE+ QI+ PR L
Sbjct: 267 LIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRAL 323
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 171 VRGEI-EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES---EMQISTPRVLSQ- 225
V+GE E R+ +S+ ++ ++ G +F GN+ YGQ S E + S ++ +
Sbjct: 153 VQGETDEDMRVKSMSAGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRI 212
Query: 226 -----CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C +V G L +G +Y+ G+G GQ + T TL G
Sbjct: 213 SQEDICGKEDEVVQAECGQDHSMFLTKKGRIYTCGWGADGQ---TGQGNYHTAGQITLIG 269
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
K K+ L A+ G + WG ++YGQL
Sbjct: 270 GDV--EKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQL 307
>gi|119572477|gb|EAW52092.1| Williams-Beuren syndrome chromosome region 16, isoform CRA_b [Homo
sapiens]
Length = 266
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 145/221 (65%), Gaps = 3/221 (1%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D G + CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 28 DFTGAGKIKVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 87
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 88 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 146
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 147 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 206
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 207 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 247
>gi|256084446|ref|XP_002578440.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1156
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 185/340 (54%), Gaps = 24/340 (7%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK-----GNPLELVMSFVRIPLP 62
ACGYGFT + + ++GCG+NSD QLG K G+ + +V VRI +
Sbjct: 773 ACGYGFTTYIYEGSHGDFGVYGCGINSDGQLGSQSVGLKTKLATGDSVNVVPELVRISVR 832
Query: 63 VKHPSTQI---KHLATGRAHTIVITDNEG---------AFTFGNNSFGQCGRGIV--QEE 108
+ + Q+ H+A GRAHTI+ +N F+ GNN FGQCGR IV ++
Sbjct: 833 LDNTQKQVYRPSHVACGRAHTIISYENLKESNSDTPPLVFSLGNNVFGQCGREIVPGEKY 892
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
D+ + + E + I VCGQDHTL L+ G VYSCG G+DGQTGLGH N +
Sbjct: 893 DHDMEVITKIVLPPEIKSIKQLVCGQDHTLLLSSDGVVYSCGLGSDGQTGLGHYNVVDRF 952
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQC 226
V+G + ER+ LSS D VLA+++ +F WGN+EYGQI + ++Q+ P L+
Sbjct: 953 TAVKGSLMNERVCLLSSRGDTVLALTESNKLFAWGNNEYGQIWPLDQDIQVPEPVHLNLD 1012
Query: 227 K---GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
V I +A GS C ++N G V+ WG+G +G GPKV+ S +PTLIP LF
Sbjct: 1013 HYNVHVGEIQSIACAGSMCCIVNKIGQVFVWGFGCIGLGPKVTCSPRPTLIPPGLFMPAI 1072
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
N +S + + AG F +N G L+ WG + G LG
Sbjct: 1073 VNSESCINYVAAGLHHFIVQSNDGLLWAWGAPRGGLYCLG 1112
>gi|353230243|emb|CCD76414.1| putative soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 504
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 181/351 (51%), Gaps = 35/351 (9%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK-----GNPLELVMSFVRIPLP 62
ACGYGFT + + ++GCG+NSD QLG K G+ + +V VRI +
Sbjct: 112 ACGYGFTTYIYEGSHGDFGVYGCGINSDGQLGSQSVGLKTKLATGDSVNVVPELVRISVR 171
Query: 63 VKHPSTQI---KHLATGRAHTIVITDNEG---------AFTFGNNSFGQCGRGIVQEE-- 108
+ + Q+ H+A GRAHTI+ +N F+ GNN FGQCGR IV E
Sbjct: 172 LDNTQKQVYRPSHVACGRAHTIISYENLKESNSDTPPLVFSLGNNVFGQCGREIVPGEKY 231
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
D+ + + E + I VCGQDHTL L+ G VYSCG G+DGQTGLGH N +
Sbjct: 232 DHDMEVITKIVLPPEIKSIKQLVCGQDHTLLLSSDGVVYSCGLGSDGQTGLGHYNVVDRF 291
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV----LS 224
V+G + ER+ LSS D VLA+++ +F WGN+EYGQI + I P L
Sbjct: 292 TAVKGSLMNERVCLLSSRGDTVLALTESNKLFAWGNNEYGQIWPLDQDIQVPEPVHLNLD 351
Query: 225 QC------------KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPT 272
C V I +A GS C ++N G V+ WG+G +G GPKV+ S +PT
Sbjct: 352 HCIVPIESHLSSDNVHVGEIQSIACAGSMCCIVNKIGQVFVWGFGCIGLGPKVTCSPRPT 411
Query: 273 LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
LIP LF N +S + + AG F +N G L+ WG + G LG
Sbjct: 412 LIPPGLFMPAIVNSESCINYVAAGLHHFIVQSNDGLLWAWGAPRGGLYCLG 462
>gi|256084448|ref|XP_002578441.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1167
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/351 (38%), Positives = 182/351 (51%), Gaps = 35/351 (9%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK-----GNPLELVMSFVRIPLP 62
ACGYGFT + + ++GCG+NSD QLG K G+ + +V VRI +
Sbjct: 773 ACGYGFTTYIYEGSHGDFGVYGCGINSDGQLGSQSVGLKTKLATGDSVNVVPELVRISVR 832
Query: 63 VKHPSTQI---KHLATGRAHTIVITDNEG---------AFTFGNNSFGQCGRGIV--QEE 108
+ + Q+ H+A GRAHTI+ +N F+ GNN FGQCGR IV ++
Sbjct: 833 LDNTQKQVYRPSHVACGRAHTIISYENLKESNSDTPPLVFSLGNNVFGQCGREIVPGEKY 892
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
D+ + + E + I VCGQDHTL L+ G VYSCG G+DGQTGLGH N +
Sbjct: 893 DHDMEVITKIVLPPEIKSIKQLVCGQDHTLLLSSDGVVYSCGLGSDGQTGLGHYNVVDRF 952
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV----LS 224
V+G + ER+ LSS D VLA+++ +F WGN+EYGQI + I P L
Sbjct: 953 TAVKGSLMNERVCLLSSRGDTVLALTESNKLFAWGNNEYGQIWPLDQDIQVPEPVHLNLD 1012
Query: 225 QC------------KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPT 272
C V I +A GS C ++N G V+ WG+G +G GPKV+ S +PT
Sbjct: 1013 HCIVPIESHLSSDNVHVGEIQSIACAGSMCCIVNKIGQVFVWGFGCIGLGPKVTCSPRPT 1072
Query: 273 LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
LIP LF N +S + + AG F +N G L+ WG + G LG
Sbjct: 1073 LIPPGLFMPAIVNSESCINYVAAGLHHFIVQSNDGLLWAWGAPRGGLYCLG 1123
>gi|358334196|dbj|GAA52634.1| Williams-Beuren syndrome chromosomal region 16 protein homolog,
partial [Clonorchis sinensis]
Length = 482
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 193/372 (51%), Gaps = 45/372 (12%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK----GNPLELVMSFVRIPLPV 63
ACGYGFT+ + L+GCG+NSD QLG + K PL +V + I LP+
Sbjct: 110 ACGYGFTMYICGDSRRRRTLYGCGINSDGQLGQNFGLKSETPDSKPLHVVPAPQLIVLPL 169
Query: 64 KHPSTQ---IKHLATGRAHTIV-----------ITDNEGAFTFGNNSFGQCGRGIVQEED 109
++ + H+A GRAH++V I FT GNN+FGQCGR IVQ E
Sbjct: 170 SKSESEHLSLAHIACGRAHSVVGLEPQAEQDGRIRGRPILFTMGNNAFGQCGRQIVQGEL 229
Query: 110 YQGKWFCHNIADLEGEKI--MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
Y + L E + CGQDHTL L+ G VY+ G G DGQTGLGHLN +
Sbjct: 230 YGPGTAVTSRISLPPEVLGLKQICCGQDHTLLLSIDGVVYAAGLGTDGQTGLGHLNCTDQ 289
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTP--RVL 223
V G + I +LSS D VLA+S+ G +F WGN+EYGQI + +Q+ P L
Sbjct: 290 FQAVGGALRKVHITQLSSVGDTVLALSECGRLFAWGNNEYGQIWPAGDALQVPEPVELPL 349
Query: 224 SQC----------KGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP 271
+C +GV +++ VA+ GS C++++D G ++ WG+G +G GP+ + + +P
Sbjct: 350 DECVVPEEAGANFRGVRIGKVLSVAAAGSMCSLVDDAGFLFVWGFGCIGLGPQTNFAHRP 409
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ--LGLG------ 323
TLIP LF + S+ AG F A G L+ WG + G LGLG
Sbjct: 410 TLIPPGLFVPAIPKSPQALVSVTAGLHHFIARNANGLLWAWGAPRSGLYCLGLGVELSKK 469
Query: 324 -TVEDQPFPLKV 334
+ + PFP+K+
Sbjct: 470 SSRQTYPFPVKI 481
>gi|341886904|gb|EGT42839.1| hypothetical protein CAEBREN_15515 [Caenorhabditis brenneri]
Length = 409
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 175/341 (51%), Gaps = 26/341 (7%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH--DPRKKGNPLELVMSFVRIPL 61
I I+ G+GF++ A+++K L+G G+N+ Q+G H DP K + +S +I +
Sbjct: 72 IKTISSGFGFSLFASENK-----LYGAGINNRFQIGGHLTDPSKY---QDYYVSAKKINI 123
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF--CHNI 119
P + +I +++GRAH+++ T N G F G+N+FGQCGR + E G I
Sbjct: 124 PAE----EIYEISSGRAHSLIRT-NRGVFAIGDNNFGQCGRDPAKAESVVGSEDDPLLPI 178
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ I+ C D + + +G VYS G DGQ G Q TP V G++ G
Sbjct: 179 SIPTDSPIVSIHCSLDTSFVVDGNGDVYSFGLNEDGQCGNEQYGIQWTPRKVTGDVAGTP 238
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVAS 237
I ++ + D ++A S GDVF WG +EYGQ + E+Q++T R + + IV + S
Sbjct: 239 IERVRGSTDTIMATSRDGDVFVWGQTEYGQAAGATEEIQLNTARHVP-LSSIGPIVSIDS 297
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
SA N G V+ WG G+LG GP+ +P + LF K+ S+ AG
Sbjct: 298 TQSAVIAQNQRGEVFVWGVGVLGMGPETEVLKRPVRMDQPLFD------GKKITSIAAGN 351
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
AI G L++WG+N+Y LGLG + Q FP ++ + G
Sbjct: 352 SCMSAINESGRLFIWGENRYSSLGLGHSKRQLFPYQLFLPG 392
>gi|341875489|gb|EGT31424.1| hypothetical protein CAEBREN_24313 [Caenorhabditis brenneri]
Length = 424
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 26/341 (7%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH--DPRKKGNPLELVMSFVRIPL 61
I I+ G+GF++ A+++K LFG G+N+ Q+G H DP K + +S +I +
Sbjct: 87 IKTISSGFGFSLFASENK-----LFGAGINNRFQIGGHLTDPSKYQ---DYYISAKKINI 138
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF--CHNI 119
P + +I +++GRAH+++ T N G F G+N+FGQCGR + E G I
Sbjct: 139 PAE----EIFEISSGRAHSLIRT-NRGVFAIGDNNFGQCGRDPAKAESVVGSEDDPLLPI 193
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ I+ C D + + + G VYS G DGQ G Q TP V G++ G
Sbjct: 194 SIPTDSPIVSIHCSLDTSFVVDDHGAVYSFGLNEDGQCGNEQYGIQWTPRKVTGDVAGAP 253
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVAS 237
I ++ + D ++A S GDVF WG +EYGQ + E+Q++T R + + IV + +
Sbjct: 254 IERVRGSTDTIMATSRDGDVFVWGQTEYGQAAGATEEIQLNTARHVP-LSSIGPIVSIDT 312
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
SA N V+ WG G+LG GP+ +P + LF K+ S+ AG
Sbjct: 313 TQSAVIAQNRRSEVFVWGVGVLGMGPETEVLKRPVQMDQPLFD------GKKITSIAAGN 366
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
AI G L++WG+N+Y LGLG + Q FP ++ + G
Sbjct: 367 SCMSAINESGRLFIWGENRYSSLGLGHSKRQLFPYQLFLPG 407
>gi|156398885|ref|XP_001638418.1| predicted protein [Nematostella vectensis]
gi|156225538|gb|EDO46355.1| predicted protein [Nematostella vectensis]
Length = 394
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 167/333 (50%), Gaps = 75/333 (22%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+++I CG+GFT V+ S + + PR I LP
Sbjct: 69 KVSNIGCGHGFTAVSEASN------YAASI----------PRS-------------IDLP 99
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH-NIAD 121
V T+I +A GR+H +V+TD+EG F G NS GQCG G V + + K F H + D
Sbjct: 100 VFCEKTRITQIACGRSHALVLTDSEGVFVIGGNSQGQCGFGGVTD---KVKSFQHLPLPD 156
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G I+ VCG DH+L L+ GKV+SCGWGADGQTGLG ++ + GE+ G +I
Sbjct: 157 ATG-AIVKVVCGMDHSLLLSCDGKVFSCGWGADGQTGLGFFDDAVKVSQLEGELSGVKIK 215
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+SSAVDC LAVS+ GDVF WGNSEY QI
Sbjct: 216 DISSAVDCCLAVSEDGDVFSWGNSEYAQIG------------------------------ 245
Query: 242 CTMLNDE---GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+++DE G +YSWGYG+LG G V+ S +P I Q + ++ L G
Sbjct: 246 --LMSDEKQDGSMYSWGYGVLGHGSDVTFSKEPIRI------QAVDDVSERITELYCGLD 297
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T G L++WG+ +G+LGLG+ EDQ P
Sbjct: 298 HAAFTTESGKLFVWGRGGFGRLGLGSDEDQWSP 330
>gi|327292188|ref|XP_003230802.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog, partial [Anolis carolinensis]
Length = 200
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 159 LGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQ 216
LGH + P +RG++ G R+ ++++ DC LAVS++GD+FGWGNSEY Q++ Q
Sbjct: 1 LGHYDVVGRPTKLRGDLSGVRVAQVAAGGDCSLAVSEEGDLFGWGNSEYLQLASVTEATQ 60
Query: 217 ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPS 276
++ PR L V R+ + A GG+ C +LN+EG V+ WG+G+LG+GPK+ ++ P +IP
Sbjct: 61 VNVPRHLP--FKVGRVKEAACGGTVCALLNEEGHVFVWGFGILGKGPKLMETVAPEMIPP 118
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+LFG NP+ +V + G F AITN G L++WGKN G LG+G +EDQ FP +V V
Sbjct: 119 SLFGFSDVNPEVRVARIRCGLGQFAAITNRGELFVWGKNVRGCLGIGRMEDQYFPWRVTV 178
Query: 337 GGQ 339
G+
Sbjct: 179 PGE 181
>gi|193203348|ref|NP_001021671.2| Protein W09G3.7, isoform a [Caenorhabditis elegans]
gi|148472915|emb|CAD92382.3| Protein W09G3.7, isoform a [Caenorhabditis elegans]
Length = 404
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 173/340 (50%), Gaps = 25/340 (7%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I+ G+GF++ A+K++ L+G G+N+ Q+G + + + +
Sbjct: 68 IKFISSGFGFSLFASKNR-----LYGAGINNRFQIG-----GQLTNINKYQDYYISAKKI 117
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
P +I +++GRAH+++ T N G F G+N+FGQCGR + DY + L
Sbjct: 118 NIPGDEILEISSGRAHSLIRT-NLGVFAIGDNNFGQCGRN-PENMDYVVGSEESPLLPLS 175
Query: 124 ---GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
E I+ C D + + SG V+S G DGQ G Q P VRG++EG +I
Sbjct: 176 FPTSEPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKI 235
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG 238
K+S + D +LA S+ G++F WG +EYGQ + E+Q++T R ++ G I+ V S
Sbjct: 236 QKVSGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLG--PIICVDST 293
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
S+ N G V+ WG G+LG GP+ PT + LF V S+ AG
Sbjct: 294 QSSVVARNSRGNVFVWGVGVLGMGPEAESLKTPTQMDQPLFDGKM------VTSVSAGNS 347
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
AI G L++WG+N+Y LGLG + Q FP ++ + G
Sbjct: 348 CMSAINEDGRLFIWGENRYSSLGLGHQKRQLFPYQLFLPG 387
>gi|256084450|ref|XP_002578442.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1056
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 142/279 (50%), Gaps = 35/279 (12%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK-----GNPLELVMSFVRIPLP 62
ACGYGFT + + ++GCG+NSD QLG K G+ + +V VRI +
Sbjct: 773 ACGYGFTTYIYEGSHGDFGVYGCGINSDGQLGSQSVGLKTKLATGDSVNVVPELVRISVR 832
Query: 63 VKHPSTQI---KHLATGRAHTIVITDNEG---------AFTFGNNSFGQCGRGIV--QEE 108
+ + Q+ H+A GRAHTI+ +N F+ GNN FGQCGR IV ++
Sbjct: 833 LDNTQKQVYRPSHVACGRAHTIISYENLKESNSDTPPLVFSLGNNVFGQCGREIVPGEKY 892
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
D+ + + E + I VCGQDHTL L+ G VYSCG G+DGQTGLGH N +
Sbjct: 893 DHDMEVITKIVLPPEIKSIKQLVCGQDHTLLLSSDGVVYSCGLGSDGQTGLGHYNVVDRF 952
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV----LS 224
V+G + ER+ LSS D VLA+++ +F WGN+EYGQI + I P L
Sbjct: 953 TAVKGSLMNERVCLLSSRGDTVLALTESNKLFAWGNNEYGQIWPLDQDIQVPEPVHLNLD 1012
Query: 225 QC------------KGVSRIVDVASGGSACTMLNDEGLV 251
C V I +A GS C ++N G V
Sbjct: 1013 HCIVPIESHLSSDNVHVGEIQSIACAGSMCCIVNKIGQV 1051
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 128 MDAVCGQDHTLFLTESGK----VYSCGWGADGQTG---LGHLNNQET-------PCLVRG 173
+ A CG T ++ E VY CG +DGQ G +G T P LVR
Sbjct: 770 LKAACGYGFTTYIYEGSHGDFGVYGCGINSDGQLGSQSVGLKTKLATGDSVNVVPELVRI 829
Query: 174 EIE---GERIVKLSSAVDC-----VLAVSDKGD--------VFGWGNSEYGQI------- 210
+ ++ V S V C +++ + + VF GN+ +GQ
Sbjct: 830 SVRLDNTQKQVYRPSHVACGRAHTIISYENLKESNSDTPPLVFSLGNNVFGQCGREIVPG 889
Query: 211 --SESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-----LGQG 262
+ +M++ T VL + K + ++V G +L+ +G+VYS G G LG
Sbjct: 890 EKYDHDMEVITKIVLPPEIKSIKQLV---CGQDHTLLLSSDGVVYSCGLGSDGQTGLGHY 946
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
V R T + +L + +V L + T A+T L+ WG N+YGQ+
Sbjct: 947 NVVDRF---TAVKGSLMNE-------RVCLLSSRGDTVLALTESNKLFAWGNNEYGQI 994
>gi|196004750|ref|XP_002112242.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
gi|190586141|gb|EDV26209.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
Length = 417
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 25/331 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+IT + GY + ++A + D + GLN SQLG P + +E + S + +P
Sbjct: 78 QITSLGIGYNYLIMADATSD----VLVTGLNLRSQLGL--PASENECIEGIRS---VEMP 128
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P I+ +A GR+H++++T N + GNN FGQCG E ++ + L
Sbjct: 129 HNFP---IQQVACGRSHSLILTTNNQVYAAGNNLFGQCGINQKSHEPEVTRF--TQLESL 183
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
CG DH+L +T G++Y C + GLG N V GE++ + IV
Sbjct: 184 PNLSFKQICCGLDHSLLVTTDGQIY-CIMNLFYRVGLGKHENIYQFTCVEGELKHKTIVH 242
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ D VLA++D V+GWG++EY Q+ + QI P+ +S +IV VA+GGS
Sbjct: 243 IATSADTVLALADDSSVYGWGDTEYSQLQFDDDAKQICLPKRISLDCIKEKIVQVAAGGS 302
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C + G V+ WG+G LG G ++ +P LI +F +KV+ +
Sbjct: 303 FCLACTETGNVFVWGFGALGVGNEIMDCREPRLI--------RFPDGAKVKKIACSINHA 354
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+++ G +Y WG+ +G+LG+G ED P
Sbjct: 355 VALSDTGKVYTWGRGSFGKLGIGNDEDAFAP 385
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 23/147 (15%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIK----HLATGRAHTIV 82
++G G SQL + D K+ I LP + IK +A G + +
Sbjct: 259 VYGWGDTEYSQLQFDDDAKQ------------ICLPKRISLDCIKEKIVQVAAGGSFCLA 306
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
T+ F +G + G G I+ + + F +G K+ C +H + L++
Sbjct: 307 CTETGNVFVWGFGALG-VGNEIMDCREPRLIRF------PDGAKVKKIACSINHAVALSD 359
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPC 169
+GKVY+ G G+ G+ G+G+ + PC
Sbjct: 360 TGKVYTWGRGSFGKLGIGNDEDAFAPC 386
>gi|324515696|gb|ADY46286.1| Williams-Beuren syndrome chromosomal region 16 protein, partial
[Ascaris suum]
Length = 449
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 33/344 (9%)
Query: 3 KITDIACGYGFTVVATKSK--DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I +A G+GF++ A+ SK + +F +NSD G+ + RI
Sbjct: 73 NIHRVASGFGFSIFASNSKVFGGGIDIFSNDINSD---GFWSHGR------------RIM 117
Query: 61 LPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-----RGIVQEEDYQGKW 114
L PS+ I +A GR H ++ T+ + + FG+N+ GQCG R + + +
Sbjct: 118 LGSNDPSSDTIVDIAAGRRHFLIATE-KSLYAFGDNAHGQCGHDPALRTFLLPSEKR--- 173
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
H + I C D + L +SG+++S G G DGQ G G + LV G+
Sbjct: 174 -VHTVHVPSDAHIRQVHCTLDTSFVLLDSGEIFSFGLGTDGQLGRGVQSFDWRCKLVEGD 232
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRI 232
++G +I + + D +LAVS+ G++F WG +EY Q++ EMQ R + + +I
Sbjct: 233 LKGVKIASIRGSTDTLLAVSESGELFMWGQNEYAQMNPFSEEMQEGFAREIR--FALPKI 290
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+ S ++C ++ +G V+ WGYG+LGQGP +S PT++ + LF +V+
Sbjct: 291 ANADSTATSCVLVTIDGDVFVWGYGILGQGPNISALSCPTILAANLFSGGP-GDNGRVKQ 349
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ AG + AI+ +L+ WG N++ LGLG DQ FP +V +
Sbjct: 350 VFAGNTSIFAISMNENLFAWGVNRFSHLGLGHANDQYFPYQVVL 393
>gi|308505286|ref|XP_003114826.1| hypothetical protein CRE_28237 [Caenorhabditis remanei]
gi|308259008|gb|EFP02961.1| hypothetical protein CRE_28237 [Caenorhabditis remanei]
Length = 421
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 180/361 (49%), Gaps = 50/361 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQL-GYHDPRKKGN-------------- 48
I ++ G+GF++ A+ +K LFG G+N+ S G+ + K N
Sbjct: 68 IKFVSSGFGFSLFASDNK-----LFGAGINNRSVANGFCEALLKNNFSFQIGGQLTDSSK 122
Query: 49 PLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG----- 103
+ +S +I +PV+ +I +++GRAH+++ T N G F G+N+FGQCG+
Sbjct: 123 YQDYYISAKKIHIPVE----EILEISSGRAHSLIRT-NSGVFAIGDNNFGQCGKDPAVID 177
Query: 104 -IVQEEDYQGKWFCHNIADLE---GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
IV E+ + LE ++ C D +L + +G+V+S G DGQ G
Sbjct: 178 HIVGSEE-------SPLQPLELPTSSPVVSVHCSLDSSLIVDSTGQVFSFGLNEDGQCGN 230
Query: 160 GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQI 217
Q P V+G++ G +I ++S + D ++A+S++GDVF WG +EYGQ + ++Q+
Sbjct: 231 EKYGIQWKPSPVKGDLSGVKIKEVSGSTDTIMALSEEGDVFIWGQTEYGQAVGATEKIQL 290
Query: 218 STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPST 277
+ R ++ + I V S S+ N G + WG G+LG GP+ +PT +
Sbjct: 291 NVSRNIN-LSAIGPIASVDSTQSSVIAQNTRGEAFVWGVGVLGMGPEADVLKRPTQMDQP 349
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
LF K+ S+ AG A G L++WG+N+Y LGLG Q FP ++ +
Sbjct: 350 LFD------GKKITSVTAGNSCMSATNESGRLFIWGENRYSSLGLGHSNRQLFPYQLFLP 403
Query: 338 G 338
G
Sbjct: 404 G 404
>gi|170575518|ref|XP_001893274.1| Williams-Beuren syndrome chromosome region 16 protein [Brugia
malayi]
gi|158600812|gb|EDP37886.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Brugia malayi]
Length = 399
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 169/337 (50%), Gaps = 21/337 (6%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQ-LGYHDPRKKGNPLELVMSFVRIPLP 62
I IA G+GF+V+A++ K L+G G++ S L + +G L
Sbjct: 61 IRHIAAGFGFSVLASEQK-----LYGGGVDIFSNDLNNRNYWNEGICLNTNAK------- 108
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIA 120
K I +A GR H +V + + + FG+N+ GQCG+ V + K F I
Sbjct: 109 -KEQFGTIISVAAGRRHFLVAS-KKAVYAFGDNAHGQCGQDPENVPFVRLENKPF-QKIM 165
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGER 179
KI + C D + + +SG+V+S G G DGQ G G + N + CL + G+++G +
Sbjct: 166 IPSDSKIAEIHCTLDTSFIILDSGEVFSFGLGTDGQLGRG-ICNYDWRCLPIEGDLKGMK 224
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+ L + D ++AV++ G++F WG +EY Q+ I + + +I+ S
Sbjct: 225 VAALKGSTDTLMAVTESGELFMWGQNEYEQMHPFVKDIQSGFPCEIRLSMEKIIAADSTA 284
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++C L+ VY WG+G+LG GP V+ +P L+ + LF N KV+ + AG +
Sbjct: 285 TSCIALSSNNQVYVWGFGILGMGPYVTSLRRPALLENNLFSGGP-NDSGKVKKVFAGNSS 343
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
AI+ +L+ WG N++ LGL +DQ FP +V V
Sbjct: 344 MFAISKMDNLFSWGLNRFSHLGLSHDKDQYFPFQVDV 380
>gi|268569332|ref|XP_002640492.1| Hypothetical protein CBG13628 [Caenorhabditis briggsae]
Length = 487
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 152/286 (53%), Gaps = 27/286 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG--YHDPRKKGNPLELVMSFVRIPL 61
I ++ G+GF++ A++++ L+G G+N+ Q+G DP K + +S +I +
Sbjct: 214 IKNVTSGFGFSLFASENR-----LYGAGINNRFQIGGQLTDPSKFQ---DYYISAKKINI 265
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG------IVQEEDYQGKWF 115
P + +I +++GRAH+++ T+ +G F G+N+FGQCGR IV +D
Sbjct: 266 PAE----EILEISSGRAHSLIRTE-KGVFAIGDNNFGQCGRDPTVLEHIVGSDDSP---- 316
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ I+ C D + + GKV+S G G DGQ G Q P V+G++
Sbjct: 317 LQPLTPPTSNPIVSIHCSLDTSFIVDSEGKVFSFGLGEDGQCGNESYGIQWNPSSVKGDL 376
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIV 233
EG RI K++ + D V+A+SD+G+ F WG +EYGQ + ++Q++ R L+ + I
Sbjct: 377 EGVRIQKIAGSTDTVMALSDEGEAFVWGQTEYGQAVGATDQIQLNVSRHLNLSSTIGPIS 436
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF 279
+A+ S+ N G V+ WG G+LG GP+ +PT + LF
Sbjct: 437 SIATTQSSVIAQNKNGEVFVWGVGVLGMGPEAEVLKRPTRMDQPLF 482
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-----PC 169
+ I + I + G +LF +E+ ++Y G Q G G L +
Sbjct: 202 YPKRITYFNTKSIKNVTSGFGFSLFASEN-RLYGAGINNRFQIG-GQLTDPSKFQDYYIS 259
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-------------SESEMQ 216
+ I E I+++SS L ++KG VF G++ +GQ +S +Q
Sbjct: 260 AKKINIPAEEILEISSGRAHSLIRTEKG-VFAIGDNNFGQCGRDPTVLEHIVGSDDSPLQ 318
Query: 217 ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMK--PTLI 274
TP + IV + +++ EG V+S+G G GQ S ++ P+ +
Sbjct: 319 PLTPPTSNP------IVSIHCSLDTSFIVDSEGKVFSFGLGEDGQCGNESYGIQWNPSSV 372
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
L G +++ + T A+++ G ++WG+ +YGQ
Sbjct: 373 KGDLEG-------VRIQKIAGSTDTVMALSDEGEAFVWGQTEYGQ 410
>gi|402594173|gb|EJW88099.1| hypothetical protein WUBG_00987 [Wuchereria bancrofti]
Length = 399
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 168/336 (50%), Gaps = 19/336 (5%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +A G GF+V+A++ K L+G G++ S + R N + S +
Sbjct: 61 IRHVAAGLGFSVLASEQK-----LYGGGVDIFSN--DLNNRNYWNEGICLNSNAK----- 108
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIAD 121
K I +A GR H +V + + + FG+N+ GQCG+ V + K F I
Sbjct: 109 KEQFGTIISVAAGRRHFLVAS-KKAVYAFGDNAHGQCGQDPENVPFVRLENKPF-QKIMI 166
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGERI 180
KI C D + + +SG+++S G G DGQ G G + N + CL + G+++G ++
Sbjct: 167 PSDSKIAQIHCTLDTSFIILDSGEIFSFGLGTDGQLGRG-VCNYDWRCLPIEGDLKGMKV 225
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
L + D ++AV++ G++F WG +EY Q+ I + + +I+ S +
Sbjct: 226 AALKGSTDTLMAVTESGELFMWGQNEYEQMYPFVKDIQSGFPCEIRLSMEKIIAADSTAT 285
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+C L+ VY WG+G+LG GP V+ +P L+ + LF N KV+ + AG +
Sbjct: 286 SCIALSSNNQVYVWGFGILGMGPNVTSLRRPALLENNLFSGGP-NDSGKVKKVFAGNSSM 344
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
AI+ +L+ WG N++ LGL +DQ FP +V V
Sbjct: 345 FAISKMDNLFSWGLNRFSHLGLSHDKDQYFPFQVDV 380
>gi|312077559|ref|XP_003141357.1| williams-Beuren syndrome chromosome region 16 protein [Loa loa]
gi|307763478|gb|EFO22712.1| williams-Beuren syndrome chromosome region 16 protein [Loa loa]
Length = 371
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 25/334 (7%)
Query: 9 CGYGFTVVATKSKDKNLKLFGCGLNSDSQ-LGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
G+GF+V+A++ K L+G G++ S L Y + +G L++ +
Sbjct: 38 AGFGFSVLASEQK-----LYGGGVDIFSNDLEYSNYWSEGVCLKINFK--------EEQF 84
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIADLEGE 125
I +A GR H +V + + + FG+N+ GQCG+ V + K F I
Sbjct: 85 GTIIDVAAGRRHFLVAS-KKAVYAFGDNAHGQCGQDPENVPFVRLENKPF-QKITVPSDS 142
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGERIVKLS 184
+I C D + + +SG+V+S G G DGQ G G + + CL V G+++G ++ L
Sbjct: 143 EIAQIHCTLDTSFIVLDSGEVFSFGLGTDGQLGRG-ICGCDWRCLPVEGDLKGMKVATLK 201
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ D ++AV+ G++F WG +EY Q+ ++Q P + G +I S ++C
Sbjct: 202 GSTDTLMAVTKSGELFMWGQNEYEQMYPFVRDIQSGYPHEIRLSTG--KIAAADSTATSC 259
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L+ VY WG+G+LG GP V+ +P L+ S LF N KV+ + AG + A
Sbjct: 260 IALSSNDQVYVWGFGILGMGPNVTSLRRPALLESNLFSGGP-NDSGKVKKVFAGNSSMFA 318
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
I+ +L+ WG N++ LGL +Q FP +V +
Sbjct: 319 ISRMDNLFSWGLNRFSHLGLSHDRNQHFPFQVDI 352
>gi|7509185|pir||T26319 hypothetical protein W09G3.3 - Caenorhabditis elegans
Length = 522
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 144/281 (51%), Gaps = 19/281 (6%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I+ G+GF++ A+K++ L+G G+N+ Q+G + + + +
Sbjct: 211 IKFISSGFGFSLFASKNR-----LYGAGINNRFQIG-----GQLTNINKYQDYYISAKKI 260
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
P +I +++GRAH+++ T N G F G+N+FGQCGR + DY + L
Sbjct: 261 NIPGDEILEISSGRAHSLIRT-NLGVFAIGDNNFGQCGRN-PENMDYVVGSEESPLLPLS 318
Query: 124 ---GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
E I+ C D + + SG V+S G DGQ G Q P VRG++EG +I
Sbjct: 319 FPTSEPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKI 378
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG 238
K+S + D +LA S+ G++F WG +EYGQ + E+Q++T R ++ G I+ V S
Sbjct: 379 QKVSGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLG--PIICVDST 436
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF 279
S+ N G V+ WG G+LG GP+ PT + LF
Sbjct: 437 QSSVVARNSRGNVFVWGVGVLGMGPEAESLKTPTQMDQPLF 477
>gi|73696630|gb|AAZ81022.1| Williams-Beuren syndrome chromosome region 16 [Macaca mulatta]
Length = 136
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 51 ELVMSFVRIPLPVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED 109
E V+ + LP+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +++ E
Sbjct: 7 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEI 66
Query: 110 YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
Y H + D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P
Sbjct: 67 YSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPT 125
Query: 170 LVRGEIEGERI 180
+ G++ G I
Sbjct: 126 KLGGDLAGVNI 136
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQCKGVSRIVD 234
R++++S L ++D+ VF GN+ YGQ + E+E+ + RV ++V
Sbjct: 26 RVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQDFDGQVVQ 85
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQ 261
VA G L D+G VYS G+G GQ
Sbjct: 86 VACGQDHSLFLTDKGEVYSCGWGADGQ 112
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ---ETPCLVRGEIEGERIVK 182
+++ CG+ H+L LT+ V+S G + GQ G + N+ E+ + R + ++V+
Sbjct: 26 RVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVIENEIYSESHRVHRMQDFDGQVVQ 85
Query: 183 LSSAVDCVLAVSDKGDVF--GWG 203
++ D L ++DKG+V+ GWG
Sbjct: 86 VACGQDHSLFLTDKGEVYSCGWG 108
>gi|170072879|ref|XP_001870278.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869335|gb|EDS32718.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1203
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%)
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
RIVD+A+GGS C LN+ G V++WGYG+LG GP+V +P LIP+TLFG++ FNP S+V
Sbjct: 1027 RIVDIAAGGSYCLALNEAGDVFAWGYGILGFGPEVVHQPRPRLIPATLFGRNDFNPTSRV 1086
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
++ G GAIT+ LYMWG N++G LG G +DQ FPLKVAV +
Sbjct: 1087 RAIYCGLTHSGAITDGDDLYMWGHNRHGCLGFGDRKDQFFPLKVAVSAR 1135
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIA G + + ++ D + +G G+ H PR + P L F R
Sbjct: 1027 RIVDIAAGGSYCLALNEAGD--VFAWGYGILGFGPEVVHQPRPRLIPATL---FGRNDF- 1080
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+P+++++ + G H+ ITD + + +G+N G G G D + ++F +A
Sbjct: 1081 --NPTSRVRAIYCGLTHSGAITDGDDLYMWGHNRHGCLGFG-----DRKDQFFPLKVA-- 1131
Query: 123 EGEKIMDAVCGQDHTLFL 140
++M CG DHTL L
Sbjct: 1132 VSARVMKISCGVDHTLAL 1149
>gi|332255118|ref|XP_003276680.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like [Nomascus leucogenys]
Length = 378
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 37/251 (14%)
Query: 125 EKIMDAVCGQDHTLFLTES---GKVYSCGWGADGQTGLGHLNNQET--------PCLVRG 173
+KI A CG T +++ KV+ G D Q G +T P V
Sbjct: 110 QKISSAACGYGFTQLSSKTVDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 169
Query: 174 EIEGE---RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEM----------- 215
++ R++++S L ++D+ GN+ YGQ + E+E+
Sbjct: 170 PLDRPQETRVLQVSCGRAHSLVLTDREGXXXMGNNSYGQCGRKVVENEIYSESHRVHRMQ 229
Query: 216 -------QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
Q++ PR L GV ++ A GG+ C +LN EG V+ WGYG+LG+GP + S
Sbjct: 230 DFDGQVVQVNVPRCL-HFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVES 288
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
P +IP TLFG +FNP+ +V + G F A+TN G L++WGKN G LG+G +EDQ
Sbjct: 289 AVPEMIPPTLFGLTRFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQ 348
Query: 329 PFPLKVAVGGQ 339
FP +V + G+
Sbjct: 349 YFPWRVTMPGE 359
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 28/231 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT +++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 111 KISSAACGYGFTQLSSKTVDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 169
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG GNNS+GQCGR +V+ E Y H +
Sbjct: 170 PLDRPQETRVLQVSCGRAHSLVLTDREGXXXMGNNSYGQCGRKVVENEIYSESHRVHRMQ 229
Query: 121 DLEGE----------------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
D +G+ K+ A CG L G V+ G+G G+ +L
Sbjct: 230 DFDGQVVQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKG--PNLVE 287
Query: 165 QETPCLVRGEIEGE-------RIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
P ++ + G ++ ++ + A+++KG++F WG + G
Sbjct: 288 SAVPEMIPPTLFGLTRFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRG 338
>gi|384495236|gb|EIE85727.1| hypothetical protein RO3G_10437 [Rhizopus delemar RA 99-880]
Length = 372
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 167/346 (48%), Gaps = 60/346 (17%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+A G+G +++ T + ++G GLN QLG + + K P
Sbjct: 51 VATGWGHSLIGTSNV-----VYGFGLNKSGQLG-----------TMACDSGHSKMTFKDP 94
Query: 67 STQIKHLATGRAHTIVITDNE-----GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K LA GR H+ V+ ++E G ++FGNN +GQ G G ++ G+ +
Sbjct: 95 ---VKSLACGREHSHVVIESEDKKKTGLYSFGNNMYGQLGIG-KNKKTTPGQLVAESQLR 150
Query: 122 LEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP------CLVRG 173
L + I D CG D+T+ TE G++Y+ GWGADGQ G G ++++ P C+ +
Sbjct: 151 LVNFDKTIKDVACGLDNTVLTTEDGEIYAMGWGADGQLGQGQ-SDKDVPSKLDISCMTK- 208
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS--QCKGVSR 231
K+SS+ D L ++++ ++ WGNSEYGQ ++ + R+L + +
Sbjct: 209 --------KISSSTDYTLLLTNE-KLYTWGNSEYGQGAQGK---KIDRILEPVEIETDKD 256
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
++DVA+GG L+ G VY+ GYG LG GP++ S+K + +V
Sbjct: 257 MIDVAAGGPFSVFLDHLGQVYTCGYGALGLGPEMIESLKLEKVKGL----------EQVS 306
Query: 292 SLIAGPCTFGAITNFGHLYMWGKN-QYGQLGLGTVEDQPFPLKVAV 336
+ A A+T G L+ WG N G+LGLG E P +V +
Sbjct: 307 KIYASTDYAAALTVQGELFTWGLNGPSGRLGLGHQEHAFIPKRVNI 352
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 37/204 (18%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I D+ACG TV+ T+ + ++ G +D QLG +G + V S + I
Sbjct: 158 IKDVACGLDNTVLTTEDGE----IYAMGWGADGQLG------QGQSDKDVPSKLDI---- 203
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S K +++ +T+++T NE +T+GN+ +GQ QGK + +E
Sbjct: 204 ---SCMTKKISSSTDYTLLLT-NEKLYTWGNSEYGQGA---------QGKKIDRILEPVE 250
Query: 124 GE---KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ER 179
E ++D G ++FL G+VY+CG+GA G L + L +++G E+
Sbjct: 251 IETDKDMIDVAAGGPFSVFLDHLGQVYTCGYGALG------LGPEMIESLKLEKVKGLEQ 304
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWG 203
+ K+ ++ D A++ +G++F WG
Sbjct: 305 VSKIYASTDYAAALTVQGELFTWG 328
>gi|313221277|emb|CBY43732.1| unnamed protein product [Oikopleura dioica]
Length = 621
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 158/347 (45%), Gaps = 35/347 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-----HDPRK---KGNPLELVMSFVR 58
++ G GF+VV + L+GCGLN+ QLG+ +D K + LE+V + +
Sbjct: 67 VSAGIGFSVVQADGE-----LYGCGLNTSGQLGFQGYSKYDAEKLESEVKNLEIVKTLSK 121
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK--WFC 116
I K S+QI L+ GR H +TD G+N GQCGR + +E + F
Sbjct: 122 IKTS-KPTSSQIVSLSAGRQHFGFVTDTGKVHLMGSNRSGQCGRRVNMDEISFDRPVEFS 180
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ + G + C D TL L E+GKV S G G DGQ G G + +P V E
Sbjct: 181 FDTSVRFGSPAVKISCAFDSTLILLENGKVISFGNGWDGQLGRGDFVSDHSPDFVDCE-- 238
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVL-----SQCKGVS 230
ER V + S D LA ++ G +FGWGN+EY QIS E+ +I P+ + + V
Sbjct: 239 -ERFVDIESCADWTLAKTEDGRIFGWGNNEYHQISSQEIDRIGKPQEILFDEFFENIKVL 297
Query: 231 RIVDVASGGSACTMLNDEG--LVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+I +S G A + + +YSWGYG + P + + + L H++
Sbjct: 298 KIACTSSQGFALVASDVKSGTALYSWGYGFHNEISSEPISRKYPQEVALNVNLKVNHEYL 357
Query: 286 PKSKVES--LIAGPCTFGAITNFGHLYMWGKNQ---YGQLGLGTVED 327
P + S + G +T L GKN+ G L G + D
Sbjct: 358 PLTDAHSHNIFGGVNALAILTEDNELLTLGKNESDVLGHLNRGNLAD 404
>gi|76154258|gb|AAX25748.2| SJCHGC05517 protein [Schistosoma japonicum]
Length = 279
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 19/175 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK-----GNPLELVMSFVRIPLP 62
ACGYGFT + + + ++GCG+NSD QLG K G+ + +V VRI +P
Sbjct: 98 ACGYGFTTYICEGSNGDFGVYGCGINSDGQLGSQSVGLKSTLDSGDSINVVPEPVRIHIP 157
Query: 63 VKHPSTQI---KHLATGRAHTIVITDNEG---------AFTFGNNSFGQCGRGIVQEE-- 108
+ + QI H+A GRAHTI+ +N F+ GNN FGQCGR I+ E
Sbjct: 158 LNNAEKQIYRPSHVACGRAHTIISYENLKGRSGDTPPLVFSLGNNVFGQCGREIIAGEKY 217
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN 163
D+ + + E + I VCGQDH++ L+ G VY+CG G+DGQTGLGH +
Sbjct: 218 DHDTEVITRIVLPPEIQSIKQLVCGQDHSILLSSDGVVYTCGLGSDGQTGLGHYD 272
>gi|161669234|gb|ABX75469.1| Williams-Beuren syndrome chromosome region 16 homolog [Lycosa
singoriensis]
Length = 138
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Query: 219 TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTL 278
TP+ L V ++ VASGG+ C +LN+ G VY WGYG+LGQGP VS S PTL+P L
Sbjct: 1 TPKFLKL--NVGKVKQVASGGTLCAVLNESGQVYVWGYGILGQGPNVSSSEVPTLLPEPL 58
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
FG ++F+ ++VE + G F A+TN GHLYMWGKN+ LGL DQ FP KV++
Sbjct: 59 FGINEFSDDTEVEQIACGLSHFAAVTNKGHLYMWGKNRNNCLGLYKPADQFFPFKVSIPA 118
Query: 339 Q 339
+
Sbjct: 119 E 119
>gi|313221275|emb|CBY43730.1| unnamed protein product [Oikopleura dioica]
Length = 358
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 145/307 (47%), Gaps = 30/307 (9%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-----HDPRK---KGNPLELVMSFVR 58
++ G GF+VV + L+GCGLN+ QLG+ +D K + LE+V + +
Sbjct: 55 VSAGIGFSVVQADGE-----LYGCGLNTSGQLGFQGYSKYDAEKLESEVKNLEIVKTLSK 109
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK--WFC 116
I K S+QI L+ GR H +TD G+N GQCGR + +E + F
Sbjct: 110 IKTS-KPTSSQIVSLSAGRQHFGFVTDTGKVHLMGSNRSGQCGRRVNMDEISFDRPVEFS 168
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ + G + C D TL L E+GKV S G G DGQ G G+ + +P V E
Sbjct: 169 FDTSVRFGSPAVKISCAFDSTLILLENGKVISFGNGWDGQLGRGYFVSDHSPDFVDCE-- 226
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVL-----SQCKGVS 230
ER V + S D LA ++ G +FGWGN+EY QIS E+ +I P+ + + V
Sbjct: 227 -ERFVDIESCADWTLAKTEDGRIFGWGNNEYHQISSQEVDRIGKPQEILFDEFFENIKVL 285
Query: 231 RIVDVASGGSACTMLNDEG--LVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+I +S G A + + +YSWGYG + P + + + L H++
Sbjct: 286 KIACTSSQGFALVASDVKSGTALYSWGYGFHNEISSEPISRKYPQEVALNVNLKVNHEYL 345
Query: 286 PKSKVES 292
P + S
Sbjct: 346 PLTDAHS 352
>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
Length = 489
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI-VQEEDYQGKWFCH 117
+P + P Q +A G+ H +T + T+GN G+ G +Q+E +
Sbjct: 177 LPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPR 236
Query: 118 NIAD----------LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
+ AD LE +KI+ A CG HT LT+ G+VY+ G+G +G G G+ + +
Sbjct: 237 SYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDL 296
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
P V G IVK+ +D A+ G+++ WG++ YGQ+ ++ I+ V Q +
Sbjct: 297 PKKVEGL---SNIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQ 353
Query: 228 ---GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQH 282
G S +VD++ G LND+G + WGYG GQ G K ++ +P + T
Sbjct: 354 LPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFT----- 408
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ ++ G G IT G L+++G+ + GQLG G V + ++
Sbjct: 409 -----EPLRRVVCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESMAAFRI 455
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 18/131 (13%)
Query: 199 VFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WGN + GQ+ + +S P + Q I+ V + G + +G +Y+WG
Sbjct: 99 LLSWGNGQNGQLGNGNETLSLSIPSPV-QVLSDEDIIQVNASGDISAAVTSQGQIYTWGK 157
Query: 257 ---GLLGQGPKVSRS---MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
G L Q +SR+ + PTLI + P+ + + G +T G L
Sbjct: 158 TRGGSLSQQKSLSRATNLLLPTLIVA---------PEVQFVQVACGKTHLAGVTKDGKLI 208
Query: 311 MWGKNQYGQLG 321
WG G+LG
Sbjct: 209 TWGNPDQGKLG 219
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 144/331 (43%), Gaps = 38/331 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I + CG +T+ S+ + ++ G +LG+ D V +P P+
Sbjct: 67 IESVVCGAEYTIAVAPSRGQ---VYSWGWGDFGRLGHGDCND-----------VFVPRPI 112
Query: 64 KHPSTQIKH-LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---I 119
+ S + H +A G HT+V+ FTFG N GQ G G + C + +
Sbjct: 113 EFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTND--------CLSPQLV 164
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L+GE++ CG +H+L TESG V+S GWG G G G ++ P V G +EG R
Sbjct: 165 VALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIR 223
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+V VS+ G VF +G S+YGQ+ + T +RI VA G
Sbjct: 224 MVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGW 283
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G +Y WG +G LG G R P L+ L GQ +V + G
Sbjct: 284 RHTMAADSSGNLYGWGWNKFGQLGLGDSSDRP-SPVLVGGALAGQ-------RVSLVTCG 335
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
A+T G +Y WG+ GQLG G +D
Sbjct: 336 WRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 23/278 (8%)
Query: 70 IKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
I+ + G +TI + + G +++G FG+ G G D + I G +
Sbjct: 67 IESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHG-----DCNDVFVPRPIEFFSGRPVH 121
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG HTL + G++++ G +GQ GLGH N+ +P LV ++GER+ ++ +
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVV-ALQGERVRSVACGSE 180
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA ++ G VF WG YG + + E Q P + +G+ R+V G ++++
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGI-RMVSAECGWRHSAVVSE 239
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V+++G YG LG G R++ P + + +++ S+ G A
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTV-PCQVAALR--------HTRISSVAGGWRHTMAAD 290
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV--AVGGQK 340
+ G+LY WG N++GQLGLG D+P P+ V A+ GQ+
Sbjct: 291 SSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQR 328
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELV-MSFVRIPL 61
++ +ACG ++ AT+S +F G LG + + + P +V + +R+
Sbjct: 171 RVRSVACGSEHSLAATESG----TVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRM-- 224
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
G H+ V++++ FTFG + +GQ G G D+ + +A
Sbjct: 225 ---------VSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHG-----DHTDRTVPCQVAA 270
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +I G HT+ SG +Y GW GQ GLG +++ +P LV G + G+R+
Sbjct: 271 LRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVS 330
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ 216
++ +AV++ G V+ WG GQ+ Q
Sbjct: 331 LVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQ 365
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV---D 188
CG H++ + G V S G G DGQ G G Q CL I + S V +
Sbjct: 20 CGSSHSVAILSCGIVTSWGRGEDGQLGHG----QADECLAPKAISTLTDAGIESVVCGAE 75
Query: 189 CVLAVS-DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+AV+ +G V+ WG ++G++ + + PR + G + VA G + ++
Sbjct: 76 YTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSG-RPVHRVACGDTHTLVVA 134
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
EG ++++G G LG G + + P L+ + L G+ +V S+ G A
Sbjct: 135 GEGELFTFGRNQNGQLGLG-HTNDCLSPQLVVA-LQGE-------RVRSVACGSEHSLAA 185
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T G ++ WG +YG LG G +D+ P +V
Sbjct: 186 TESGTVFSWGWGRYGNLGDGESQDRYLPTRV 216
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 18/165 (10%)
Query: 185 SAVDC----VLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGG 239
+AV C +A+ G V WG E GQ+ + + P+ +S V
Sbjct: 16 TAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAE 75
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G VYSWG +G LG G +P + +F V + G
Sbjct: 76 YTIAVAPSRGQVYSWGWGDFGRLGHG-----DCNDVFVPRPI----EFFSGRPVHRVACG 126
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G L+ +G+NQ GQLGLG D P L VA+ G++
Sbjct: 127 DTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGER 171
>gi|313224885|emb|CBY20677.1| unnamed protein product [Oikopleura dioica]
Length = 574
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-----HDPRK---KGNPLELVMSFVR 58
+ G GF+VV + L+GCGLN+ QLG+ +D K + LE+V + +
Sbjct: 30 VTAGIGFSVVQADGE-----LYGCGLNTSGQLGFQGYSKYDAEKLESEVKNLEIVKTLSK 84
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK--WFC 116
I K S+QI L+ GR H +TD G+N GQCGR + +E + F
Sbjct: 85 IKTS-KPTSSQIVSLSAGRQHFGFVTDTGKVHLMGSNRSGQCGRRVNMDEISFDRPFEFS 143
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ + G + C D TL L E+GKV S G G DGQ G G + +P V E
Sbjct: 144 FDTSVRFGFPAVKISCAFDSTLILLENGKVISFGNGWDGQLGRGEFVSDHSPDFVDCE-- 201
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVL-----SQCKGVS 230
ER V + S D LA ++ G +FGWGN+EY QIS E+ +I P+ + + V
Sbjct: 202 -ERFVDIESCADWTLAKTEDGRIFGWGNNEYHQISSQEVDRIGKPQEILFDEFFENIKVL 260
Query: 231 RIVDVASGGSACTMLNDEG--LVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+I +S G A + + +YSWGYG + P + + + L H
Sbjct: 261 KIACTSSQGFALVASDVKSGTALYSWGYGFHNEISSEPISRKYPQEVALDVNLKVNH--- 317
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQ---YGQLGLGTVED 327
++ G +T L GKN+ G L G + D
Sbjct: 318 ------NIFGGVNALAILTEDNELLTLGKNESDVLGHLNRGNLAD 356
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
IT +A G ++ T + + G NS QLG + P V + LP
Sbjct: 91 TITALAAGGSHSLALTDTG----VVLAWGSNSRGQLGDGTTTDRSTP-------VTVGLP 139
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
T I LA GR H++ +TD +G+NS GQ G G L
Sbjct: 140 AG---TTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARS------TPVTVGL 190
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ A+ ++L LT++G + G + GQ G G ++ TP V G I
Sbjct: 191 PAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVS-LPAGTTITA 249
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
L+++ D LA++D G V WG++ GQ+ + + STP + G + I +A+G S
Sbjct: 250 LAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTT-ITALAAGRSH 308
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTL-IPSTLFGQHQFNPKSKVESLIAGP 297
+L G V +WG G LG G RS T+ +P+ + + +L AG
Sbjct: 309 TLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPA----------GTTITALAAGY 358
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T+ G + WG N YGQLG GT D+ P+ V
Sbjct: 359 YHSLALTDTGAVLAWGGNSYGQLGDGTTTDRSTPVTV 395
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 130/281 (46%), Gaps = 24/281 (8%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+ V P+ T I LA G +H++ +TD +G+NS GQ G G +
Sbjct: 81 PVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTP-----VT 135
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ G I G+ H+L LT++G V + G ++GQ G G + TP V G G
Sbjct: 136 VGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVTV-GLPAGT 194
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
I L+++ LA++D G WG++ GQ+ + + STP +S G + I +A+
Sbjct: 195 TITALAASTYS-LALTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVSLPAGTT-ITALAA 252
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTL-IPSTLFGQHQFNPKSKVESL 293
L D G V +WG G LG G +RS T+ +P+ + + +L
Sbjct: 253 SYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPA----------GTTITAL 302
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG +T+ G + WG N GQLG GT D+ P+ V
Sbjct: 303 AAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTV 343
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 20/193 (10%)
Query: 151 WGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
WG + GQ G G + TP V G G I L++ LA++D G V WG++ G
Sbjct: 62 WGDNFSGQLGDGTTTARSTPVTV-GLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRG 120
Query: 209 QISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPK 264
Q+ + + STP + G + I +A+G L D G V +WG G LG G
Sbjct: 121 QLGDGTTTDRSTPVTVGLPAGTT-ITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTT 179
Query: 265 VSRSMKPTL-IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+RS T+ +P+ + + +L A + A+T+ G WG N GQLG G
Sbjct: 180 TARSTPVTVGLPA----------GTTITALAASTYSL-ALTDTGAALAWGSNSRGQLGDG 228
Query: 324 TVEDQPFPLKVAV 336
T D+ P+ V++
Sbjct: 229 TTTDRSTPVTVSL 241
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G +V+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + IV ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+VF WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K +V + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRVIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G +Q K + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRK-----LDSLSGKKIACLSYGSGPHVVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C IV +A G + D G V+ WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVVV 305
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ TP V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 133/317 (41%), Gaps = 40/317 (12%)
Query: 49 PLELVMSFVRIPL--PVKHPSTQIKHLATGR-------------------------AHTI 81
P +L +S++R L PV+ + +K L G+ +
Sbjct: 5 PSDLELSYLREKLTKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGGAGNEVL 64
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFL 140
T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLA 119
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+VF
Sbjct: 120 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 201 GWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
WG + GQ+ S S + TPR ++ C +V +A G C + D G VY WGY
Sbjct: 180 AWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN 239
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
GQ + +PT P + +V+ + G +T+ G +Y WG N YGQ
Sbjct: 240 GQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Query: 320 LGLGTVEDQPFPLKVAV 336
LG G +Q +P V V
Sbjct: 294 LGTGNKSNQSYPTPVTV 310
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 125 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 180
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ TP V G ++ + +V ++
Sbjct: 181 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQ 240
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 241 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 299
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 300 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 349
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 350 AKTQGGHVYMWGQ 362
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 85 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 139
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 140 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 199
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + TPR ++ C +V +A G C + D G VY WGY
Sbjct: 200 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNG 259
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 260 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 313
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 314 QLGTGNKSNQSYPTPVTV 331
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 55 GKWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 114
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 115 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 172
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +PT P + G Q
Sbjct: 173 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPT--PRRVTGCLQ- 229
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 230 --NKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 278
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G +V+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 116 KIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 171
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 172 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQ 231
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 232 MCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGI-RVQRVACGYAHTLVLT 290
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S +I K ++ + A T
Sbjct: 291 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVE----------KDRIIEIAACHSAHTSA 340
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 341 AKTQGGHVYMWGQ 353
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 76 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHVVL 130
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 131 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 190
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + D G VY WGY
Sbjct: 191 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNG 250
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 251 NGQLGLGSGGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 304
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 305 QLGTGNKSNQSYPTPVIV 322
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 46 GKWPIFSLCSEEELQLVRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 105
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 106 PRRL-DSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 163
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 164 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 220
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P ++A
Sbjct: 221 --NKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIA 269
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G +V+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 75 KIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP +S +G+ R+ VA G + +L
Sbjct: 191 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G VQ + C L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDC-----LSGKKIACLSYGSGPHVVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + D G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGSSGNQPT--PCRVSALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVVV 281
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 15/281 (5%)
Query: 57 VRIPLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
V IP P++ I +A G HT+ +TD F+FG N GQ G G +
Sbjct: 107 VFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAI-----L 161
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ L G+++ CG +H+L T +G V++ GWG G G+G ++ P V G +
Sbjct: 162 PQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-L 220
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVD 234
EG ++ ++ +A + G V+ +G S+YGQ+ + + P+ + K SRIV
Sbjct: 221 EGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKD-SRIVL 279
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
+A G + +D G +YSWG+ GQ S + +P Q S V+ L
Sbjct: 280 IAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPV------QGLNTSPVKLLS 333
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T G ++ WG+ GQLG +D P+++A
Sbjct: 334 CGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLA 374
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 31/276 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ ++ G +H++ + N A ++G GQ G G +E F +M
Sbjct: 15 RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIF----------HLM 64
Query: 129 DAVC-----GQDHTLFLTE-SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
A C G ++++ L++ +VYS GWG G+ G G N+ P +R + G IVK
Sbjct: 65 QASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRA-LAGRNIVK 123
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSA 241
++ LAV+D G++F +G ++ GQ+ + P+ + +G + +A GG
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRG-QEVTSIACGGEH 182
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G V++WG YG LG GP R + PS + G KV S+ G
Sbjct: 183 SLAATSAGDVFAWGWGRYGNLGVGPPEDRHL-----PSQVHGLEGV----KVTSVACGWR 233
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A G +Y +G ++YGQLG G DQ P V
Sbjct: 234 HSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAV 269
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+T +ACG+ ++ A D+ ++ G + QLG+ D + P + V S
Sbjct: 223 VKVTSVACGWRHSIAA----DETGAVYTFGWSKYGQLGHGDCIDQLVP-KAVESL----- 272
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++I +A G HT D+ +++G N FGQ G G + + +
Sbjct: 273 ----KDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVP-----VQG 323
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
L + CG HT +TE+G V+S G G +GQ LGH ++T VR
Sbjct: 324 LNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQ--LGHNEPKDTNAPVR 372
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 13/167 (7%)
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVS 230
R + R+ +S LA+ G WG E GQ+ + + PR + S
Sbjct: 8 RSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQAS 67
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ + + VYSWG +G LG G IP + N
Sbjct: 68 CSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHG-----DCNDVFIPQPIRALAGRN-- 120
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G A+T+ G L+ +G+NQ GQLGLGT D P V
Sbjct: 121 --IVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPV 165
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 148/320 (46%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ AC +G N ++F G N LG D R P L
Sbjct: 18 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLD-------- 69
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G IV+ EG FT+G+N++ Q G G G CH
Sbjct: 70 --SLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHIST 123
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +++++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +
Sbjct: 124 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 183
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G
Sbjct: 184 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGY 242
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +L DEG VY+WG YG LG G K ++S PT P T+ K ++ + A
Sbjct: 243 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAAC 292
Query: 297 PCTF--GAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 293 HSTHTSAAKTQGGHVYMWGQ 312
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D + + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVRSTIEPRRLDSLNGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVTV 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 180 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 228
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 191 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVTV 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 180 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 228
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 118
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 238
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 239 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 293 QLGTGNKSNQSYPTPVTV 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 34 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 93
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 94 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 151
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 208
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 209 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 118
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 238
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 239 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 293 QLGTGNKSNQSYPTPVTV 310
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
+ L+ T + +++ G G GLG + + P + + G++I LS S VLA
Sbjct: 61 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRL-DSLNGKKIACLSYGSGPHIVLA 119
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G+VF WG++ Y Q+ P +S ++++VA G +L +G V
Sbjct: 120 TTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
++WGY GQ S +P IP + G Q V ++ G A+ + G +Y+
Sbjct: 179 FAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ---NKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVA 335
WG N GQLGLG +QP P +VA
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVA 257
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 118
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 238
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 239 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 293 QLGTGNKSNQSYPTPVTV 310
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 34 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 93
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 94 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 151
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 208
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 209 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C + + + D CG HT+F+ + G VY+CG
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFIN---KNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI- 210
GQ LGH ++ P V G ++ + IV +S LA++DKG VF WG++ YGQI
Sbjct: 61 NDLGQ--LGHDKSRRKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIG 117
Query: 211 -SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
S +E I PR + V +IV VA G L+ + ++SWG YG LG G ++
Sbjct: 118 LSTAEEYIRVPRNIKSLSDV-QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ P I S + AG A+T G ++ WG+N++GQLGL
Sbjct: 177 KECAPRHIKSL--------SGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDET 228
Query: 327 DQPFP 331
D+ P
Sbjct: 229 DRNVP 233
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 140/341 (41%), Gaps = 45/341 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ CG TV ++ CG N QLG+ R+K P V
Sbjct: 36 VRDVGCGSRHTVFVLDDG----TVYTCGCNDLGQLGHDKSRRK-------------PEQV 78
Query: 64 KHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
QI ++ G AHT+ + D F++G+ +GQ G +E + NI L
Sbjct: 79 GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+I+ CG H+L L++ ++S G GQ GLG +E + G
Sbjct: 135 SDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAH 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ A++ G +FGWG +++GQ+ E + P +L + +I+ + G
Sbjct: 195 IAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE---SLIAGPC 298
L EG V+++G G GQ S + H+ NP+ E S++
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTN-------------HEVNPRKVFELMGSIVTQIA 300
Query: 299 -----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG G+ ++ P V
Sbjct: 301 CGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTV 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G G + T S +FG G N QLG D + P ++ +R
Sbjct: 190 IPFAHIAAGGGHSFALTISG----AIFGWGRNKFGQLGLTDETDRNVPA--LLKSLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I H+ G HT +T G FTFG +GQ G E K F +
Sbjct: 241 -----SQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL F+ SG++YS G G +GQ G G N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I +ACG+ ++ +K D +F G N QLG KK + S IP
Sbjct: 137 VQIVQVACGHHHSLALSKDSD----IFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPF 192
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H+A G H+ +T + F +G N FGQ G + E D +
Sbjct: 193 ---------AHIAAGGGHSFALTISGAIFGWGRNKFGQLG--LTDETDRNVPAL---LKS 238
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +KI+ CG+DHT LT+ G V++ G G GQ G N++ P V E+ G +
Sbjct: 239 LRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FELMGSIVT 297
Query: 182 KLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ LA V G ++ +G GQ+
Sbjct: 298 QIACGRQHTLAFVPSSGRIYSFGLGGNGQL 327
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 191 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVTV 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 180 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 228
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 102 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 157
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 158 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 217
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 218 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 276
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 277 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 326
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 327 AKTQGGHVYMWGQ 339
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 62 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 116
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 117 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 176
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 177 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 236
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 237 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 290
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 291 QLGTGNKSNQSYPTPVTV 308
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 32 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 91
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 92 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 149
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 150 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 206
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 207 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 255
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C + + + D CG HT+F+ + G VY+CG
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFIN---KNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI- 210
GQ LGH ++ P V G ++ + IV +S LA++DKG VF WG++ YGQI
Sbjct: 61 NDLGQ--LGHDKSRRKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIG 117
Query: 211 -SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
S +E I PR + V +IV VA G L+ + ++SWG YG LG G ++
Sbjct: 118 LSTAEEYIRVPRNIKSLSDV-QIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ P I S + AG A+T G ++ WG+N++GQLGL
Sbjct: 177 KECAPRHIKSL--------SGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDET 228
Query: 327 DQPFP 331
D+ P
Sbjct: 229 DRNVP 233
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 140/341 (41%), Gaps = 45/341 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ CG TV ++ CG N QLG+ R+K P V
Sbjct: 36 VRDVGCGSRHTVFVLDDG----TVYTCGCNDLGQLGHDKSRRK-------------PEQV 78
Query: 64 KHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
QI ++ G AHT+ + D F++G+ +GQ G +E + NI L
Sbjct: 79 GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+I+ CG H+L L++ ++S G GQ GLG +E + G
Sbjct: 135 SDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAH 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ A++ G +FGWG +++GQ+ E + P +L + +I+ + G
Sbjct: 195 IAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE---SLIAGPC 298
L EG V+++G G GQ S + H+ NP+ E S++
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTN-------------HEVNPRKVFELMGSIVTQIA 300
Query: 299 -----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG G+ ++ P V
Sbjct: 301 CGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTV 341
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G G + T S +FG G N QLG D + P ++ +R
Sbjct: 190 IPFAHIAAGGGHSFALTISG----AIFGWGRNKFGQLGLTDETDRNVPA--LLKSLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I H+ G HT +T G FTFG +GQ G E K F +
Sbjct: 241 -----SQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL F+ SG++YS G G +GQ G G N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I +ACG+ ++ +K D +F G N QLG KK + S IP
Sbjct: 137 VQIVQVACGHHHSLALSKDSD----IFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPF 192
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H+A G H+ +T + F +G N FGQ G + E D +
Sbjct: 193 ---------AHIAAGGGHSFALTISGAIFGWGRNKFGQLG--LTDETDRNVPAL---LKS 238
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +KI+ CG+DHT LT+ G V++ G G GQ G N++ P V E+ G +
Sbjct: 239 LRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FELMGSIVT 297
Query: 182 KLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ LA V G ++ +G GQ+
Sbjct: 298 QIACGRQHTLAFVPSSGRIYSFGLGGNGQL 327
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 118
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 238
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 239 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 293 QLGTGNKSNQSYPTPVTV 310
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 34 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 93
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 94 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 151
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 208
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 209 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 132/317 (41%), Gaps = 40/317 (12%)
Query: 49 PLELVMSFVRIPL--PVKHPSTQIKHLATGR-------------------------AHTI 81
P +L +S++R L PV+ + +K L G+ +
Sbjct: 5 PSDLELSYLREKLTKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVL 64
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFL 140
T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLA 119
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+VF
Sbjct: 120 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 201 GWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 180 AWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN 239
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
GQ + +PT P + +V+ + G +T+ G +Y WG N YGQ
Sbjct: 240 GQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Query: 320 LGLGTVEDQPFPLKVAV 336
LG G +Q +P V V
Sbjct: 294 LGTGNKSNQSYPTPVTV 310
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 85 KIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTN----HGSVPCHISTNLSNKQV 140
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G GQ G G NQ P V G ++ +V ++
Sbjct: 141 IEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQ 200
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S STP ++ +G+ R+ VA G + +L
Sbjct: 201 MCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGI-RVQRVACGYAHTLVLT 259
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
D+G VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 260 DDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSTHTSA 309
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 310 AKTQGGHVYMWGQ 322
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 19/261 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 45 LYMTVNDEIFVLGTNCCGCLGLG-----DIQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 99
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 100 ATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 159
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S PR ++ C +V++A G + D G VY WGY
Sbjct: 160 FAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNG 219
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G + S P I + +V+ + G +T+ G +Y WG N
Sbjct: 220 NGQLGLGSSGNHS-TPCRIAAL--------QGIRVQRVACGYAHTLVLTDDGQVYAWGAN 270
Query: 316 QYGQLGLGTVEDQPFPLKVAV 336
YGQLG G +Q +P V V
Sbjct: 271 SYGQLGTGNKSNQSYPTPVVV 291
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 TEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+V+ WG + GQ+ S TP ++ +G+ RI VA G + +L
Sbjct: 215 MCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RIQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE----------KDRIVEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDALSGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++ +++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + + G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +++ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRIAALQGI----RIQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPAPVVV 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRLDA-LSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++ +VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
V ++ G A+ N G +Y+WG N GQLGLG+ +QP P ++A
Sbjct: 204 --NKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAA 253
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G C +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCQISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTM-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V +
Sbjct: 288 QLGTGNKSNQSYPTPVTM 305
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRLD-SLSGKKIASLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCQIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G C +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCQISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTM-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V +
Sbjct: 288 QLGTGNKSNQSYPTPVTM 305
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIASLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCQIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ +S
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +++++ G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVVV 305
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLMPCHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 131 TEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+V+ WG + GQ+ S TP +S +G+ R+ VA G + +L
Sbjct: 191 MCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC--TFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE----------KDRIIEIAACHLAHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++ +++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + + G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGSSGNQPT--PCRISALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPAPVVV 281
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLMPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++ +VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 123 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ N G +Y+WG N GQLGLG+ +QP P +++
Sbjct: 180 --NKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIS 228
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G C +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCQISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIASLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCQIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLMPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 TEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+V+ WG + GQ+ S TP +S +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC--TFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE----------KDRIIEIAACHLAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++ +++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + + G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRISALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPAPVVV 305
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLMPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++ +VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ N G +Y+WG N GQLGLG+ +QP P +++
Sbjct: 204 --NKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIS 252
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G C +L +++
Sbjct: 104 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCQISTNLSNKQV 159
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 160 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 219
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 220 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 278
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 279 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 328
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 329 AKTQGGHVYMWGQ 341
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 118
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 238
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 239 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 293 QLGTGNKSNQSYPTPVTV 310
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 34 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 93
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 94 PRRL-DSLSGKKIASLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCQIS 151
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 152 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 208
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 209 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 257
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 126/246 (51%), Gaps = 20/246 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C EG+++ D CG+ HT+FL E G VY+CG
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEF---FEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH ++ P V ++ + IV +S LA++DKG VF WG GQ+
Sbjct: 61 NDLGQ--LGHEKARKKPEQVVS-LDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLG 117
Query: 212 ESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
S ++ + PR + V I VA G L G ++SWG YG LG G + +
Sbjct: 118 LSIVEDCLRVPRTVKSLSEV-HITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGA 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
P +I S Q P ++ + G +FG +T G ++ WG+N++GQLGLG +
Sbjct: 177 CVCSPQVIQSL-----QGIPFGQISA--GGAHSFG-LTLSGAIFGWGRNKFGQLGLGDND 228
Query: 327 DQPFPL 332
D+ FP+
Sbjct: 229 DRRFPV 234
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 24/272 (8%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + GR HT+ + ++ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPEQ-------VVSLDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+V++ G G+DGQ GL + + P V+ + I +++
Sbjct: 88 AVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKS-LSEVHITQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G++F WG ++YGQ+ + + +P+V+ +G+ +++GG+ L
Sbjct: 147 WHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIP-FGQISAGGAHSFGL 205
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G ++ WG +G LG G R P L+ TL Q +V + G A
Sbjct: 206 TLSGAIFGWGRNKFGQLGLGDNDDRRF-PVLL-KTLRSQ-------QVVYICCGEDHTAA 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ +G YGQLG + + P KV
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV 288
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 28/263 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV + ++ CG N QLG+ RKK E V+S
Sbjct: 35 RVRDVGCGRRHTVFLLEDG----TVYTCGCNDLGQLGHEKARKKP---EQVVSL------ 81
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ I ++ G AHT+ + D F +G S GQ G IV++ + + L
Sbjct: 82 ---DAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPR----TVKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL----VRGEIEGE 178
I CG H+L L G+++S G GQ GLG Q+ C+ V ++G
Sbjct: 135 SEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLG----QQGACVCSPQVIQSLQGI 190
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
++S+ ++ G +FGWG +++GQ+ + VL + ++V + G
Sbjct: 191 PFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCG 250
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ 261
L EG V+++G G GQ
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQ 273
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVITD 85
+FG G N QLG D + R P+ +K S Q+ ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLGDNDDR-----------RFPVLLKTLRSQQVVYICCGEDHTAALTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
G FTFG +GQ G E K F +L G + CG+ HTL F+ SG
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTNHEVNPRKVF-----ELMGSVVSQIACGRQHTLAFIPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
K+ S G G +GQ G N+ +P V+G
Sbjct: 315 KIDSFGLGGNGQLGTRSTCNRISPTPVKG 343
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 23/223 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ IT +ACGY ++ + + +F G N QLG +++ S IP
Sbjct: 137 VHITQVACGYWHSLALARGGE----IFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPF 192
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ G AH+ +T + F +G N FGQ G G D + F +
Sbjct: 193 ---------GQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLG-----DNDDRRFPVLLKT 238
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L ++++ CG+DHT LT+ G V++ G G GQ G N++ P V E+ G +
Sbjct: 239 LRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF-ELMGSVVS 297
Query: 182 KLSSAVDCVLAV---SDKGDVFGW-GNSEYGQISESEMQISTP 220
+++ LA S K D FG GN + G S TP
Sbjct: 298 QIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTP 340
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T ++ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVDDEIFVLGTNCSGCLGIG-----DIQSTIEPRRLNSLTGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C ++++A G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVVV 305
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E + + C + L+ T +++ G G G+G + +
Sbjct: 29 GKWPIFSLCSEEELQSIRQACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGDIQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRLNS-LTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G C +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCQISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIASLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCQIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ AC +G N ++F G N LG D + P L
Sbjct: 42 LQVIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLD-------- 93
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G IV+ EG F++G+N++GQ G G + G H
Sbjct: 94 --SLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTIN----HGLVPSHIST 147
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +++ + CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +
Sbjct: 148 NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVV 207
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G
Sbjct: 208 VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGY 266
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +L DEG VY+WG YG LG G K ++S ++ K ++ + A
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAAC 316
Query: 297 PCTF--GAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 317 HSTHTSAAKTQGGHVYMWGQ 336
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L +KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGLG-----DVQSTLEPRRLDSLSDKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V+S G A GQ G G +N+ P + + +++ +++ L ++ G+V
Sbjct: 114 ATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V++A G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVVV 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQVIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + ++I LS S VLA ++ G+VF WG++ YGQ+ + P +S
Sbjct: 89 PRRL-DSLSDKKIACLSYGSGPHIVLATTE-GEVFSWGHNAYGQLGNGTINHGLVPSHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQ 281
++ +VA G +L +G V++WGY G +G G +++ IP + G
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQA-----IPRRVTGC 201
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
Q V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 202 LQ---NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 108 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 163
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 164 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 223
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 224 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 282
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 283 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 332
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 333 AKTQGGHVYMWGQ 345
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 68 LYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVL 122
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 123 ATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 182
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C ++++A G + D G VY WGY
Sbjct: 183 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG 242
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 243 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYG 296
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 297 QLGTGNKSNQSYPTPVVV 314
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G G+G + +
Sbjct: 38 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 97
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 98 PRRL-DSLTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 155
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 156 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 212
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 213 --NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 261
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 28 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 83
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 84 TEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQ 143
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 144 MCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGYAHTLVLT 202
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 203 DEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE----------KDRIIEIAACHSAHTSA 252
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 253 AKTQGGHVYMWGQ 265
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 8/220 (3%)
Query: 119 IADLEGEKIMDAVCGQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L G+KI G H + T G+V++ G A Q G G N+ PC + +
Sbjct: 21 LESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN 80
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVA 236
+++ +++ L ++ G+VF WG + GQ+ S S PR ++ C +V++A
Sbjct: 81 KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIA 140
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G + + G VY WGY GQ S +PT P + +V+ + G
Sbjct: 141 CGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGI----RVQRVACG 194
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+T+ G +Y WG N YGQLG G +Q +P V V
Sbjct: 195 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 234
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 155 GQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISE 212
G GLG + + P + + G++I LS S VLA ++ G+VF WG++ Y Q+
Sbjct: 5 GCLGLGDVQSTIEPRRLE-SLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGN 62
Query: 213 SEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP 271
P +S ++ +VA G +L +G V++WGY GQ S S
Sbjct: 63 GTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQ--VGSGSTAN 120
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
LIP + G Q V ++ G A+ N G +Y+WG N GQLGLG+ +QP P
Sbjct: 121 QLIPRRVTGCLQ---NKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTP 177
Query: 332 LKVA 335
++A
Sbjct: 178 CRIA 181
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 126/253 (49%), Gaps = 23/253 (9%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L + +
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKHV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V ++ + +V ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S STP L+ +GV R+ VA G + +L
Sbjct: 191 MCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLA-LQGV-RVQRVACGYAHTLVLT 248
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 249 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 298
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 299 AKTQGGHVYMWGQ 311
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 20/261 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEVFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + + +++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S PR ++ +V++A G + D G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++S P L Q +V+ + G +T+ G +Y WG N
Sbjct: 210 NGQLGLGSSGNQST-----PCRLALQ-----GVRVQRVACGYAHTLVLTDEGQVYAWGAN 259
Query: 316 QYGQLGLGTVEDQPFPLKVAV 336
YGQLG G +Q +P V V
Sbjct: 260 SYGQLGTGNKSNQSYPTPVVV 280
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 14/236 (5%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +V+ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
+++VA G +L +G V++WGY GQ S + +P IP + Q
Sbjct: 123 TNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTSSLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
V ++ G A+ + G +Y+WG N GQLGLG+ +Q P ++A+ G +
Sbjct: 180 --NKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVR 233
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 23/163 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +IACG ++ N +++ G N + QLG + P L + VR
Sbjct: 183 VVNIACGQMCSMAVVD----NGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVR----- 233
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G AHT+V+TD + +G NS+GQ G G + Y +E
Sbjct: 234 ------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP------VVVE 281
Query: 124 GEKIMD-AVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNN 164
++I++ A C HT T+ G VY G L HL +
Sbjct: 282 KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTH 324
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C ++++A G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVVV 305
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G G+G + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRLDS-LTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 75 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 191 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 250 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 90 ATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C ++++A G + D G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVVV 281
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G G+G + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 180 --NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 228
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 22/272 (8%)
Query: 70 IKHLATGRAHTIVITDNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ + G +T+ + + G +++G FG+ G G + + IA G +
Sbjct: 64 VDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGD-----VFVPRPIAFFSGRPVA 118
Query: 129 DAVCGQDHTLFLTE-SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG HTL +T+ G +Y+ G +GQ GLGH N+ +P LV ++GER+ ++
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVT-ALQGERVSSVACGS 177
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ LA ++ G VF WG YG + + + Q TP + GV+ + V G ++
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVT-VTSVVCGWRHSAVVT 236
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
DEG V+++G YG LG G V + +P L+ QH +V ++ G A
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHT-RPCLVAGL---QH-----CRVSTVAGGWRHTMAA 287
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G+LY WG N++GQLGLG ED+ P VA
Sbjct: 288 DSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVA 319
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 150/337 (44%), Gaps = 38/337 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG +TV S+ + ++ G +LG+ + V +P P+
Sbjct: 64 VDAVVCGAEYTVAVASSRGQ---IYSWGWGDFGRLGHGE-----------CGDVFVPRPI 109
Query: 64 KHPSTQ-IKHLATGRAHTIVITDNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHN--- 118
S + + +A G HT+V+T +GA +TFG N GQ G G + C +
Sbjct: 110 AFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTND--------CLSPQL 161
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L+GE++ CG +H+L TE+G V+S GWG G G G ++ TP V G ++G
Sbjct: 162 VTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGV 220
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+ + V+D+G VF +G S+YGQ+ + T L R+ VA G
Sbjct: 221 TVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGG 280
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIP-----STLFGQHQFNPKSKV 290
+ EG +Y+WG +G LG G R+ PT + P+ +V
Sbjct: 281 WRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRA-APTPVAGFGLAGGGVEAGAATPR-RV 338
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
L G A+T G +Y WG+ GQLG G +D
Sbjct: 339 ALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E +++ CG H++ L + G V S G G DGQ G G + +P + +
Sbjct: 8 EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSA 241
+ A V S +G ++ WG ++G++ E + PR ++ G + VA G +
Sbjct: 68 VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSG-RPVARVACGDTH 126
Query: 242 CTMLND-EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
++ +G +Y++G G LG G + + P L+ + L G+ +V S+ G
Sbjct: 127 TLVVTQGDGALYTFGRNQNGQLGLG-HTNDCLSPQLV-TALQGE-------RVSSVACGS 177
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A T G ++ WG +YG LG G +D+ P +V
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRV 214
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IK+ AC +G +N ++F G+N LG D + P L
Sbjct: 18 IKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLD-------- 69
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G +V+ EG +T+G+N++ Q G G G C
Sbjct: 70 --SLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTN----HGFVPCQVST 123
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +K+++ CG H++ LT G+VY+ G+ GQ G G NQ P V ++ + +
Sbjct: 124 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV 183
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G
Sbjct: 184 VNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGY 242
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ +L DEG +Y+WG YG LG G K ++S T++ K +V + A
Sbjct: 243 AHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD----------KDRVIEIAAC 292
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T G +YMWG+
Sbjct: 293 HSAHTSAAKTQSGQVYMWGQ 312
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 13/259 (5%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFLTE 142
T+N+ F G N G G G D Q + L G+KI G H + TE
Sbjct: 38 TENDEVFVLGMNCSGCLGTG-----DMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATE 92
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+VY+ G A Q G G N+ PC V + +++++++ + ++ G+V+ W
Sbjct: 93 EGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTW 152
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ S S PR ++ C +V++A G + + G VY WGY GQ
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 212
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
S +PT P + +V+ + G +T+ G +Y WG N YGQLG
Sbjct: 213 LGLGSSGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 266
Query: 322 LGTVEDQPFPLKVAVGGQK 340
G +Q +P V V +
Sbjct: 267 TGNKSNQSYPTTVVVDKDR 285
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + V ++
Sbjct: 155 TEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S +I K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++ +++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C V++A G + + G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPAPVIV 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 16/232 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++ +VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+KV IA G A+ N G +Y+WG N GQLGLG+ +QP P ++A
Sbjct: 204 ---NKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIA 252
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H I+ T FT+G+N++ Q G G G CH +L +++++ CG H+L
Sbjct: 180 HVILATTEGEIFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQVIEVACGSYHSL 235
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+V++ G+ GQ G G NQ P V G ++ + +V ++ C +AV D G+
Sbjct: 236 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGE 295
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
V+ WG + GQ+ S STP ++ +G+ + VA G + +L DEG VY WG
Sbjct: 296 VYVWGYNGNGQLGLGSSGNQSTPCRIAALQGIC-VQRVACGYAHTLVLTDEGQVYVWGAN 354
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--GAITNFGHLYMW 312
YG LG G K ++S PT + K ++ + A T A T GH+YMW
Sbjct: 355 SYGQLGTGNKSNQSY-PTPVAVE---------KDRIIEIAACHSTHTSAAKTQGGHVYMW 404
Query: 313 GK 314
G+
Sbjct: 405 GQ 406
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 19/258 (7%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFLTE 142
T N+ F G N G G G D Q + L G+KI G H + T
Sbjct: 132 TVNDEIFVLGTNCCGCLGLG-----DIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATT 186
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G++++ G A Q G G N+ PC + + +++++++ L ++ G+VF W
Sbjct: 187 EGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 246
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GL 258
G + GQ+ S S PR ++ C +V++A G + D G VY WGY G
Sbjct: 247 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQ 306
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G ++S P I + L G V+ + G +T+ G +Y+WG N YG
Sbjct: 307 LGLGSSGNQST-PCRI-AALQG-------ICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P VAV
Sbjct: 358 QLGTGNKSNQSYPTPVAV 375
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 23/235 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++F G N+ SQLG P + + + Q+ +A G H++V+T
Sbjct: 189 EIFTWGHNAYSQLGNGTTNHGLVPCHISTNL---------SNKQVIEVACGSYHSLVLTS 239
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F +G N+ GQ G G + + L+ + +++ CGQ ++ + ++G+
Sbjct: 240 DGEVFAWGYNNSGQVGSGSTANQPIPRRV----TGCLQNKVVVNIACGQMCSVAVVDNGE 295
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY G+ +GQ GLG NQ TPC + ++G + +++ L ++D+G V+ WG +
Sbjct: 296 VYVWGYNGNGQLGLGSSGNQSTPCRI-AALQGICVQRVACGYAHTLVLTDEGQVYVWGAN 354
Query: 206 EYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE--GLVYSWG 255
YGQ+ ++S TP + + RI+++A+ S T G VY WG
Sbjct: 355 SYGQLGTGNKSNQSYPTPVAVEK----DRIIEIAACHSTHTSAAKTQGGHVYMWG 405
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +IACG +V N +++ G N + QLG + P +
Sbjct: 277 VVNIACGQMCSVAVVD----NGEVYVWGYNGNGQLGLGSSGNQSTPCRIAAL-------- 324
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G AHT+V+TD + +G NS+GQ G G + Y +E
Sbjct: 325 --QGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTP------VAVE 376
Query: 124 GEKIMD-AVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNN 164
++I++ A C HT T+ G VY G L HL +
Sbjct: 377 KDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTS 419
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + V ++
Sbjct: 131 TEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 191 MCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S +I K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE----------KDRIIEIAACHSAHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++ +++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C V++A G + + G VY WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGSSGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPAPVIV 281
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 16/232 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++ +VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 123 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+KV IA G A+ N G +Y+WG N GQLGLG+ +QP P ++A
Sbjct: 180 ---NKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIA 228
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 42/326 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G D QLG D + P+ LV + S + +A G HT+V++++
Sbjct: 9 VYSWGRGEDGQLGLGDTNDQDRPV-LVDAL---------KSKGVVQVACGSGHTVVLSED 58
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+T+G G+ G G D K+ + LEG++I+ A CG HT +T+ G++
Sbjct: 59 GAVYTWGRGDDGRLGHG-----DNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
Y+ G G G+ G G+ + TPC+V+ EG R+ +++ + ++D G V+ WG+
Sbjct: 114 YTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDK 173
Query: 206 EYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
E G + + ++ PR+L + + + VA+ G L G +++WG +G LG
Sbjct: 174 ENGVVGHTNADGHQYLPRMLESLQAKT-VTQVAACGFHTAALTAAGEIFTWGEGKFGRLG 232
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ- 319
G + ++ M P ++ + L G+ +V + G AI + G LY WG ++GQ
Sbjct: 233 HGMERNQ-MVPRMVEA-LMGK-------RVGHVACGGFHSAAILDSGELYTWGGGEHGQV 283
Query: 320 ----------LGLGTVEDQPFPLKVA 335
LG G V P VA
Sbjct: 284 YTFGNGDHGKLGHGDVRKVSVPTLVA 309
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 25/262 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG G TVV S+D + +G G D +LG+ D K P RI +
Sbjct: 42 VVQVACGSGHTVVL--SEDGAVYTWGRG--DDGRLGHGDNGWKYVP--------RIVEAL 89
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +I G HT +TD +T+G +G+ G G E + ++ D E
Sbjct: 90 E--GQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHG--NESGHPTPCMVKHLRD-E 144
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN---NQETPCLVRGEIEGERI 180
G ++ CG HT+ LT+ GKVY+ WG +GH N +Q P ++ ++ + +
Sbjct: 145 GARVTQIACGSRHTVVLTDLGKVYT--WGDKENGVVGHTNADGHQYLPRMLE-SLQAKTV 201
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGG 239
++++ A++ G++F WG ++G++ E PR++ G R+ VA GG
Sbjct: 202 TQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMG-KRVGHVACGG 260
Query: 240 SACTMLNDEGLVYSWGYGLLGQ 261
+ D G +Y+WG G GQ
Sbjct: 261 FHSAAILDSGELYTWGGGEHGQ 282
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
+G VYS G G DGQ GLG N+Q+ P LV ++ + +V+++ + +S+ G V+ W
Sbjct: 6 AGLVYSWGRGEDGQLGLGDTNDQDRPVLVDA-LKSKGVVQVACGSGHTVVLSEDGAVYTW 64
Query: 203 GNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + G++ + PR++ +G RIV G + D+G +Y+WG G+ G+
Sbjct: 65 GRGDDGRLGHGDNGWKYVPRIVEALEG-QRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+ S PT P + +H + ++V + G +T+ G +Y WG + G +G
Sbjct: 124 LGHGNESGHPT--PCMV--KHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVG 179
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
G V+ WG E GQ+ + VL +V VA G +L+++G VY+WG
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G + + P ++ + L GQ ++ G A+T+ G LY WG
Sbjct: 67 GDDGRLGHGDNGWKYV-PRIVEA-LEGQ-------RIVQATCGSYHTAAVTDKGELYTWG 117
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
YG+LG G P P V
Sbjct: 118 GGMYGKLGHGNESGHPTPCMV 138
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 30/194 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++T IACG TVV T K++ G + +G+ + ++ S
Sbjct: 147 RVTQIACGSRHTVVLTDLG----KVYTWGDKENGVVGHTNADGHQYLPRMLESL------ 196
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ + +A HT +T FT+G FG+ G G+ + + + L
Sbjct: 197 ---QAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQ-----MVPRMVEAL 248
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT-----------GLGHLNNQETPCLV 171
G+++ CG H+ + +SG++Y+ G G GQ G G + P LV
Sbjct: 249 MGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLV 308
Query: 172 RGEIEGERIVKLSS 185
G ++ +VK++S
Sbjct: 309 AGLVK-MHVVKVAS 321
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 35/339 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I+ I CG T ++S ++ G +LG+ GN +L IP
Sbjct: 67 EISSITCGADHTTARSES---TRTVYSWGWGDFGRLGH------GNSSDLF-----IPRA 112
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +IK +A G +H + IT + ++G N GQ G G ++ K +A
Sbjct: 113 IKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNK-----VAA 167
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG + G +HT +TESGK+Y GWG G GLG N++ P V + GE++
Sbjct: 168 FEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEV-AAVPGEKMN 226
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
++ +AV++ G+++ +G S+YGQ+ + + P + K ++ + SGG
Sbjct: 227 LVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALK--NKTIQAVSGGW 284
Query: 241 ACTM-LNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+ L+++G +Y WG+ GQ P LI + KV + G
Sbjct: 285 RHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIV--------NEKVTRVTCGW 336
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
AIT+ G++Y WG+ GQLG G D+ P ++ +
Sbjct: 337 RHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIEL 375
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 21/274 (7%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ ++ G +HT+ + + ++G GQ G G +E I+ L+
Sbjct: 12 PRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERH-----LPLVISALDDC 66
Query: 126 KIMDAVCGQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I CG DHT +ES + VYS GWG G+ G G+ ++ P ++G ++G I +++
Sbjct: 67 EISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKG-LKGLEIKQIA 125
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACT 243
LA++ G+V WG ++ GQ+ + + P ++ +G++ + +A+G
Sbjct: 126 CGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIA-VKMLAAGAEHTA 184
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ + G +Y WG YG LG G + R L+P G+ P K+ + G
Sbjct: 185 AVTESGKLYGWGWGRYGNLGLGDRNDR-----LVP----GEVAAVPGEKMNLVACGWRHT 235
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ N G+LY +G ++YGQLG G ED P +V
Sbjct: 236 IAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQV 269
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G HT+ L V S G G DGQ G G + P LV ++ I ++
Sbjct: 14 RRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLP-LVISALDDCEISSIT 72
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D A S+ V+ WG ++G++ + + PR + KG+ I +A G S C
Sbjct: 73 CGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGL-EIKQIACGDSHC 131
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +G V+SWG G LG G + L+P+ + V+ L AG
Sbjct: 132 LAITGDGEVHSWGRNQNGQLGLG-----HTEDVLVPNKVAAFEGI----AVKMLAAGAEH 182
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V AV G+K
Sbjct: 183 TAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEK 224
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A + GH+YMWG+
Sbjct: 324 AKSQGGHVYMWGQ 336
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + T N+ F G N G G G D Q + L G+KI G
Sbjct: 53 TAGNEVLYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGS 107
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + T G+V++ G A Q G G N+ PC + + +++++++ L +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S PR ++ C ++ +A G + D G VY
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVY 227
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
WGY GQ S +PT P + +V+ + G +T+ G +Y W
Sbjct: 228 VWGYNGNGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAW 281
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAV 336
G N YGQLG G +Q +P V V
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVVV 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G G+G + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V S+ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 19/265 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I IT ++ + G N G G Q K C L G+K++ G H L
Sbjct: 35 IYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC-----LSGKKLISLSYGSGPHVLL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
+TE G++Y+ G Q G G N +P LV ++G+R+ ++S LA++ +G+V
Sbjct: 90 VTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S TPR +S C IV++A G ++ + D G VY WGY
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ L P L F V + +G A+T+ G LY WG N
Sbjct: 210 NGQLGLGNNGNQ-----LTPCRLIALQGFC----VLQIASGYAHSLALTDEGLLYAWGAN 260
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
YGQLG G +Q P++V ++
Sbjct: 261 TYGQLGTGNKSNQLSPVQVMTEKER 285
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 23/243 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H +++T++ + +G+N + Q G G QG +L+G+++ + CG H+L
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLGNGTTN----QGVSPILVSTNLQGKRVTEVSCGSHHSL 141
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+V++ G+ GQ G G NQ TP V ++ + IV ++ +AV+D G+
Sbjct: 142 ALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGE 201
Query: 199 VFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+GWG + GQ + + Q+ TP L +G ++ +ASG + L DEGL+Y+WG
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQL-TPCRLIALQGFC-VLQIASGYAHSLALTDEGLLYAWGA 259
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--GAITNFGHLYM 311
YG LG G K S + P + K ++ + A T A T G +YM
Sbjct: 260 NTYGQLGTGNK-SNQLSPVQV---------MTEKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 312 WGK 314
WG+
Sbjct: 310 WGQ 312
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 121/235 (51%), Gaps = 23/235 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ G N SQLG + +P+ V L K ++ ++ G H++ +T
Sbjct: 95 ELYAWGHNGYSQLGNGTTNQGVSPI-----LVSTNLQGK----RVTEVSCGSHHSLALTH 145
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD-LEGEKIMDAVCGQDHTLFLTESG 144
F +G N+ GQ G G + K +++ L+ + I++ CGQ ++ +T++G
Sbjct: 146 EGEVFAWGYNNCGQVGSGSTANQPTPRK-----VSNCLQNKVIVNIACGQTSSMAVTDNG 200
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+VY G+ +GQ GLG+ NQ TPC + ++G +++++S LA++D+G ++ WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRLIA-LQGFCVLQIASGYAHSLALTDEGLLYAWGA 259
Query: 205 SEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML--NDEGLVYSWG 255
+ YGQ+ Q+S +V+++ RIV++A+ S T G VY WG
Sbjct: 260 NTYGQLGTGNKSNQLSPVQVMTE---KERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +IACG ++ T N +++G G N + QLG + + P L+
Sbjct: 183 IVNIACGQTSSMAVTD----NGEVYGWGYNGNGQLGLGNNGNQLTPCRLIAL-------- 230
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +A+G AH++ +TD + +G N++GQ G G + + E
Sbjct: 231 --QGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQ------VMTE 282
Query: 124 GEKIMD-AVCGQDHT-LFLTESGKVYSCGWG 152
E+I++ A C HT T+SG+VY WG
Sbjct: 283 KERIVEIAACHSTHTSAAKTQSGQVYM--WG 311
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 137/298 (45%), Gaps = 32/298 (10%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N ++F G N LG D + P L +I L+ G I++
Sbjct: 40 NDEIFVLGTNCSGCLGLGDVQSTLEPRRLD----------SLSDKKIACLSYGSGPHIIL 89
Query: 84 TDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
EG FT+G+N + Q G G G C +L +++++ CG H+L LT
Sbjct: 90 ATTEGEVFTWGHNGYTQLGNGTTN----HGLVPCQVSTNLSNKQVIEVACGSYHSLVLTS 145
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+VY+ G+ GQ G G NQ P V G ++ + +V ++ C +AV D G+V+ W
Sbjct: 146 DGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVW 205
Query: 203 GNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
G + GQ+ S TP ++ +G+ R+ VA G + +L DEG VY+WG YG
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGFAHTLVLTDEGQVYAWGANSYGQ 264
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--GAITNFGHLYMWGK 314
LG G K ++S ++ K ++ + A T A T GH+YMWG+
Sbjct: 265 LGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 17/260 (6%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L +KI G H +
Sbjct: 35 LYTTINDEIFVLGTNCSGCLGLG-----DVQSTLEPRRLDSLSDKKIACLSYGSGPHIIL 89
Query: 140 LTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
T G+V++ WG +G T LG+ N+ PC V + +++++++ L ++ G
Sbjct: 90 ATTEGEVFT--WGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDG 147
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+V+ WG + GQ+ S S + PR ++ C +V++A G + D G VY WGY
Sbjct: 148 EVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGY 207
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
GQ S +PT P + +V+ + G +T+ G +Y WG N
Sbjct: 208 NGNGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGFAHTLVLTDEGQVYAWGANS 261
Query: 317 YGQLGLGTVEDQPFPLKVAV 336
YGQLG G +Q +P V V
Sbjct: 262 YGQLGTGNKSNQSYPTPVVV 281
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 20/234 (8%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + ++I LS S +LA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLSDKKIACLSYGSGPHIILATTE-GEVFTWGHNGYTQLGNGTTNHGLVPCQVS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQ 281
++++VA G +L +G VY+WGY G +G G +++ IP + G
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQA-----IPRRVTGC 177
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
Q V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 178 LQ---NKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 228
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 49/344 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+TDIACG TVV T +N +LF G N QLG + + P + V+ P
Sbjct: 36 KVTDIACGDEHTVVVT----ENGRLFTFGNNEWGQLGIGSNKTRNKP-----TTVKALKP 86
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K I H+A GR HT+ +TD+ ++FG S G G G E D +I L
Sbjct: 87 EK-----ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHG--DETDLN---MPTSIESL 136
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E + + CG H+ +T++G++Y G ++GQ GL + + P ++ G+ ++
Sbjct: 137 EDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKN-DTISYPTMLD---LGKSVIS 192
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ---ISTPRVLSQCKGVS-RIVDVASG 238
++ V+ G ++ +G +E G++ +++ ++ P+V+ KG+S ++V VA G
Sbjct: 193 VACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVV---KGISGKVVKVACG 249
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G+ L G VY++G G GQ G K+ S P L+ + K K++ +
Sbjct: 250 GNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEAL--------SKRKIKHIAC 301
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF-----PLKV 334
G +++ G L+ +G ++G+LG G D+ F P+KV
Sbjct: 302 GESHTAVVSDKGELFTFGDGRHGKLGQG---DESFSNLFKPVKV 342
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 23/270 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++ +A G HT+V+T+N FTFGNN +GQ G G + + + L+ EK
Sbjct: 34 SDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPT-----TVKALKPEK 88
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G+ HTL +T+S K+YS G G++G G G + P + +E + + ++
Sbjct: 89 ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIES-LEDKDVNIIACG 147
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A++ G+++ WG++ GQ+ IS P +L K V + VA G ++
Sbjct: 148 GYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPTMLDLGKSV---ISVACGYYHTAVVT 204
Query: 247 DEGLVYSWGY---GLLGQGP-KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G +Y++G G LG G + + KP ++ KV + G A
Sbjct: 205 ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGI---------SGKVVKVACGGNHTVA 255
Query: 303 ITNFGHLYMWGKNQYGQLGLGT-VEDQPFP 331
+T G +Y +G Q GQLGLG+ + D P
Sbjct: 256 LTASGQVYTFGSGQNGQLGLGSKIMDSNIP 285
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 39/244 (15%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
FTFG + FG ++ K++ + +K+ D CG +HT+ +TE+G++++
Sbjct: 15 FTFGKSRFG---------DNRTNKFW------IRSDKVTDIACGDEHTVVVTENGRLFTF 59
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ G+G + P V+ ++ E+I +++ LAV+D ++ +G G
Sbjct: 60 GNNEWGQLGIGSNKTRNKPTTVKA-LKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118
Query: 210 I---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKV 265
+ E+++ + T + K V+ I A GG + G +Y WG GQ G K
Sbjct: 119 LGHGDETDLNMPTSIESLEDKDVNII---ACGGYHSAAITKNGELYIWGSNSEGQLGLKN 175
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF---GAITNFGHLYMWGKNQYGQLGL 322
PT++ G+ S+I+ C + +T G LY +G+ + G+LGL
Sbjct: 176 DTISYPTMLD---LGK----------SVISVACGYYHTAVVTADGKLYTFGETEGGKLGL 222
Query: 323 GTVE 326
G +E
Sbjct: 223 GDIE 226
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG TV T S + FG G N QLG N +LV + +
Sbjct: 242 KVVKVACGGNHTVALTASG--QVYTFGSGQNG--QLGLGSKIMDSNIPKLVEALSK---- 293
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+IKH+A G +HT V++D FTFG+ G+ G+G +E + + + L
Sbjct: 294 -----RKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQG---DESFSNLFKPVKVQRL 345
Query: 123 EGEKIMDAVCGQDHTL 138
+ ++ CG HT+
Sbjct: 346 KEFIVLHIACGGCHTI 361
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 27/267 (10%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
T+++T ++ + GNN++G G G Y K I L G+ + G+ H L
Sbjct: 39 TLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKK-----IEALCGKSVKTFAYGKGPHVL 93
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
LTE GKVYS WG + LG+ + E TP L+ + E +V ++ LA+++K
Sbjct: 94 ALTEEGKVYS--WGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNK 151
Query: 197 GDVFGWGNSEYGQISESEMQIST----PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
G+V+ WG++ GQ+ + +ST P++L ++V ++ G S+ + D G VY
Sbjct: 152 GEVYAWGHNVSGQVGCGTI-LSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVY 210
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG+ G LG G S++ +P + + K +E ++ G A+++ G L
Sbjct: 211 SWGHNGVGQLGIGNCTSQA-EPQKVATF--------AKIVIEKVVCGYMHTLALSDEGDL 261
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y+WG N YGQLGL T + P K+ V
Sbjct: 262 YVWGANSYGQLGLNTDSNVWIPTKLQV 288
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ DIACG G +A +K + ++ G N Q+G G L V ++ L +
Sbjct: 135 VVDIACG-GHHSLALTNKGE---VYAWGHNVSGQVG------CGTILSTVQPIPKL-LHI 183
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ H++ G + ++ +TDN +++G+N GQ G G + K +A
Sbjct: 184 VLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQK-----VATFA 238
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
I VCG HTL L++ G +Y G + GQ GL +N P ++ G RI+ +
Sbjct: 239 KIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVPEMG-RILDI 297
Query: 184 SSA--VDCVLAVSDKGDVFGWG 203
+++ LA+S+ +F WG
Sbjct: 298 ATSHYHHISLAMSEGNRIFMWG 319
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ AC +G +N ++F G+N LG D + P L
Sbjct: 23 LKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLD-------- 74
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G +V+ EG +T+G+N++ Q G G G C
Sbjct: 75 --SLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTN----HGFVPCQVST 128
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +K+++ CG H++ LT G+VY+ G+ GQ G G NQ P V ++ + +
Sbjct: 129 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV 188
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G
Sbjct: 189 VNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGY 247
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ +L DEG +Y+WG YG LG G K ++S T++ K +V + A
Sbjct: 248 AHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD----------KDRVIEIAAC 297
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T G +YMWG+
Sbjct: 298 HSAHTSAAKTQSGQVYMWGQ 317
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 13/259 (5%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFLTE 142
T+N+ F G N G G G D Q + L G+KI G H + TE
Sbjct: 43 TENDEVFVLGMNCSGCLGTG-----DMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATE 97
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+VY+ G A Q G G N+ PC V + +++++++ + ++ G+V+ W
Sbjct: 98 EGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTW 157
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ S S PR ++ C +V++A G + + G VY WGY GQ
Sbjct: 158 GYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 217
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
S +PT P + +V+ + G +T+ G +Y WG N YGQLG
Sbjct: 218 LGLGSSGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 271
Query: 322 LGTVEDQPFPLKVAVGGQK 340
G +Q +P V V +
Sbjct: 272 TGNKSNQSYPTTVVVDKDR 290
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
++ L+ G +V+ +EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKRV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG S GQ+ TP ++ +G+ R+ A G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGI-RVQRAACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY WG YG LG G K S +P P + K ++ + A T
Sbjct: 274 DEGQVYVWGANSYGQLGTGNK---SNQPYPTPIIV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+K+ G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLTGKKVACLSYGSGPHVVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +R+++++ L ++ G+V
Sbjct: 114 ATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ +PT P + +V+ G +T+ G +Y+WG N YG
Sbjct: 234 NGQLGLGGSGNQPT--PCRVAALQGI----RVQRAACGYAHTLVLTDEGQVYVWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +QP+P + V
Sbjct: 288 QLGTGNKSNQPYPTPIIV 305
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 26/258 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G G VV S+ + +F G N+ SQLG P + +
Sbjct: 99 KVACLSYGSGPHVVLATSEGE---VFTWGHNAYSQLGNGTTNHGLVPCHISTNL------ 149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ ++ +A G H++V+T + F +G N+ GQ G G + + L
Sbjct: 150 ---SNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV----TGCL 202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ + +++ CGQ ++ + ++G+VY G+ +GQ GLG NQ TPC V ++G R+ +
Sbjct: 203 QNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRV-AALQGIRVQR 261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGG 239
+ L ++D+G V+ WG + YGQ+ ++S TP ++ + RI+++A+
Sbjct: 262 AACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPIIVEK----DRIIEIAACH 317
Query: 240 SACTMLNDE--GLVYSWG 255
S T G VY WG
Sbjct: 318 STHTSAAKTQGGHVYMWG 335
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 60 PLPVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
P P + + Q ++ A G AHT+V+TD + +G NS+GQ G G + Y
Sbjct: 246 PTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPII- 304
Query: 117 HNIADLEGEKIMD-AVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNN 164
+E ++I++ A C HT T+ G VY G L HL +
Sbjct: 305 -----VEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVLPHLTH 349
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 122/245 (49%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C + + + D CG HT F+ + G VY+CG
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFIN---KNVRDVGCGNRHTGFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI- 210
GQ LGH +++ P V G ++ + IV +S LA++DKG VF WG++ +GQI
Sbjct: 61 NDLGQ--LGHDKSRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIG 117
Query: 211 -SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
S +E I PR + + +IV VA G L+ E +YSWG YG LG G +
Sbjct: 118 VSIAEDYIRVPRNIKSLSDI-QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ P I S L G + AG A+T G ++ WG+N++GQLGL
Sbjct: 177 KESAPRHIKS-LSG-------IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDET 228
Query: 327 DQPFP 331
D+ P
Sbjct: 229 DRSDP 233
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 43/319 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLATGRAHTIVITD 85
++ CG N QLG+ RKK P V QI ++ G AHT+ + D
Sbjct: 55 VYTCGCNDLGQLGHDKSRKK-------------PEQVGALDAQIIVAVSCGEAHTLALND 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ + GQ G I EDY NI L +I+ CG H+L L++
Sbjct: 102 KGQVFSWGHAAHGQIGVSIA--EDYIR--VPRNIKSLSDIQIVQVACGHHHSLALSKESN 157
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+YS G GQ GLG +E+ + G +++ A++ G +FGWG +
Sbjct: 158 IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRN 217
Query: 206 EYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPK 264
++GQ+ E S P +L + +I+ + G L EG V+++G G GQ
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-----PC----TFGAITNFGHLYMWGKN 315
S S H+ NP+ KV L+ C T + + G +Y +G
Sbjct: 277 NSAS-------------HEVNPR-KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322
Query: 316 QYGQLGLGTVEDQPFPLKV 334
GQLG+G+ ++ P V
Sbjct: 323 GNGQLGIGSTSNKKSPSMV 341
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G G + T S +FG G N QLG +D + +P ++ +R
Sbjct: 190 IPFAHIAAGGGHSFALTISG----AIFGWGRNKFGQLGLNDETDRSDPA--LLKSLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 241 -----SQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL F+ SG++YS G G +GQ G+G +N+++P +V+G
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 145/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ AC +G N ++F G N LG D + P L
Sbjct: 42 LQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLD-------- 93
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G +V+ EG FT+G+N++ Q G G G C
Sbjct: 94 --SLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCQIST 147
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +++++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVV 207
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G
Sbjct: 208 VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGI-RVQRVACGY 266
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +L DEG VY+WG YG LG G K ++S ++ K ++ + A
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAAC 316
Query: 297 PCTF--GAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 317 HSTHTSAAKTQGGHVYMWGQ 336
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 13/255 (5%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFLTE 142
T N+ F G N G G G D Q + L G+KI G H + T
Sbjct: 62 TVNDEIFVLGTNCSGCLGLG-----DAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATT 116
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+V++ G A Q G G N+ PC + + +++++++ L ++ G+VF W
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ S PR ++ C +V++A G + D G VY WGY GQ
Sbjct: 177 GYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
S +PT P + +V+ + G +T+ G +Y WG N YGQLG
Sbjct: 237 LGLGSGGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
Query: 322 LGTVEDQPFPLKVAV 336
G +Q +P V V
Sbjct: 291 TGNKSNQSYPTPVVV 305
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 20/234 (8%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCQIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQ 281
++++VA G +L +G V++WGY G +G GP ++ IP + G
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQP-----IPRRVTGC 201
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
Q V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 202 LQ---NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVA 252
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 35/336 (10%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T + CG +++ A DK + +G G +LG D + F+ PLP
Sbjct: 65 TSVHCGAEYSM-AVAGGDKQVYSWGWG--DFGRLGTGDVKD---------VFIPCPLPAL 112
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IAD 121
++ +A G HT+V T F FG N GQCG G +Q+ C +
Sbjct: 113 -AGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQD--------CLEPQLVTA 163
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G++++ CG +H++ +T G+VY GWG G G G ++ P L +G +EG ++
Sbjct: 164 LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKG-LEGVKVA 222
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ +AV + G ++ WG Y Q+ + + + V + + V ++ VA G
Sbjct: 223 QVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRK--DHYVPKRVEAVQQVATVAGGWRH 280
Query: 242 CTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ +G +++ G+ GQ G + + L G+ KS + +
Sbjct: 281 TMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTM------ 334
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T+ G + WG+N GQLG ++D P+++A
Sbjct: 335 -AVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVELAA 369
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 126/262 (48%), Gaps = 20/262 (7%)
Query: 91 TFGNNSFGQCGRGIVQE-----EDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
FG N GQ G G + +D F + L GE+I+ CG HT+ LT SG
Sbjct: 14 AFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTASGA 73
Query: 146 VYSCGWGADGQTGLGHLNNQETP-CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
VYS GWG+ GQ G G L + P + E EG ++ +S AV++ G ++ WG
Sbjct: 74 VYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGE 133
Query: 205 SEYGQIS-ESEMQISTPRVLSQC---KGVS--RIVDVASGGSACTMLNDEGLVYSWGYGL 258
+ +GQ+ E + + +C +GV+ +V V+ GG+ L + G VY WG G
Sbjct: 134 THWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGD 193
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQ------FNPKSKVESLIAGPCTFGAITNFGHLYMW 312
GQ S +K T + L G + FN + KV + G A+T GH+Y+W
Sbjct: 194 SGQLGIGSAWLKDT-DDNGLLGVSRPHLVEGFNGE-KVVQVACGAFHSAAVTEQGHVYIW 251
Query: 313 GKNQYGQLGLGTVEDQPFPLKV 334
GK YG LG+G DQ P +V
Sbjct: 252 GKEDYGMLGVGQTSDQQTPKRV 273
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
V+ PL + ++ G HT +T+ + +G GQ G G +D
Sbjct: 154 VKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLL 213
Query: 117 -----HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
H + GEK++ CG H+ +TE G VY G G G+G ++Q+TP V
Sbjct: 214 GVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRV 273
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVS 230
+ +++S + V+ GD + +G EYG++ + + T P ++ KG +
Sbjct: 274 E-FFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQT 332
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTL 278
++ A GGS + +G+ Y G +G LG MKP +P+ L
Sbjct: 333 -VIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGM-----TDMKPLSVPTRL 377
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 15/245 (6%)
Query: 4 ITDIACGYGFTVVATKSKDKNL-KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+ ++CG T T NL +++ G QLG K ++ R L
Sbjct: 167 VVKVSCGGTHTAALT-----NLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLV 221
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ +A G H+ +T+ + +G +G G G Q D Q D+
Sbjct: 222 EGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVG--QTSDQQTPKRVEFFDDI 279
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
++ CG HT+ + +SG Y+ G G G+ GLG ++ P LV+ ++G+ +++
Sbjct: 280 PALRVS---CGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKA-LKGQTVIQ 335
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSA 241
+ L V+ G + G ++G++ ++M+ +S P L G + V++GG+
Sbjct: 336 AACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDL--GPIPVRQVSAGGAH 393
Query: 242 CTMLN 246
L
Sbjct: 394 SMALT 398
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 31/172 (18%)
Query: 3 KITDIACGYGFTVVATKSK------DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSF 56
K+ +ACG + T+ ++ + G G SD Q P++ V F
Sbjct: 228 KVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQT----PKR-------VEFF 276
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
IP ++ G HT+V+ + + FG +G+ G G D + +
Sbjct: 277 DDIP---------ALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLG-----DTKSRTRP 322
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
H + L+G+ ++ A CG HTLF+T G Y G G+ G+ + P
Sbjct: 323 HLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVP 374
>gi|260826876|ref|XP_002608391.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
gi|229293742|gb|EEN64401.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
Length = 448
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 17/233 (7%)
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE--KIMDAVCGQDHTLFLTESGKVYSCG 150
G NS+GQ G G + H+ LEG ++ G HT F++ G+++ CG
Sbjct: 27 GANSYGQLGVGHCDDR--------HSPQQLEGVNFRVKAVTGGGGHTAFISAEGRLFVCG 78
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
W GQ GLGH ++ L + E + ++ D LAV++ G +F WG++ +GQ+
Sbjct: 79 WNQKGQLGLGH--REDVSVLTQVTTLTEPVDTVACGWDFTLAVTEDGQLFSWGSNAFGQL 136
Query: 211 SESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
E++ S P + +GV RIV VA+G L+D G V++WG G GQ ++
Sbjct: 137 GVPEVKGHTSVPTPVQTLQGV-RIVGVAAGLRHAVALDDTGSVWTWGAGKRGQLGRLEEG 195
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
PT+ T G+ Q + +S + ++ AG A+T ++ WG+ YGQLG
Sbjct: 196 RCPTVSKQT--GKVQLDVESSIVAVKAGSYHSLALTEDKRVWTWGRADYGQLG 246
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 102/239 (42%), Gaps = 26/239 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G NS QLG + +P +L R+ K + G HT I+ F
Sbjct: 27 GANSYGQLGVGHCDDRHSPQQLEGVNFRV-----------KAVTGGGGHTAFISAEGRLF 75
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
G N GQ G G ED + L E + CG D TL +TE G+++S G
Sbjct: 76 VCGWNQKGQLGLG--HREDVS---VLTQVTTLT-EPVDTVACGWDFTLAVTEDGQLFSWG 129
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
A GQ G+ + + ++G RIV +++ + +A+ D G V+ WG + GQ+
Sbjct: 130 SNAFGQLGVPEVKGHTSVPTPVQTLQGVRIVGVAAGLRHAVALDDTGSVWTWGAGKRGQL 189
Query: 211 SESEMQISTPRVLSQCKGV-----SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
E + P V Q V S IV V +G L ++ V++WG YG LG+
Sbjct: 190 GRLE-EGRCPTVSKQTGKVQLDVESSIVAVKAGSYHSLALTEDKRVWTWGRADYGQLGR 247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF CG N QLG R+ + L V + + + +A G T+ +T+
Sbjct: 73 RLFVCGWNQKGQLGL-GHREDVSVLTQVTTL----------TEPVDTVACGWDFTLAVTE 121
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F++G+N+FGQ G V+ + L+G +I+ G H + L ++G
Sbjct: 122 DGQLFSWGSNAFGQLGVPEVKGHTS----VPTPVQTLQGVRIVGVAAGLRHAVALDDTGS 177
Query: 146 VYSCGWGADGQTGLGHLNNQETPCL------VRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
V++ G G GQ LG L P + V+ ++E IV + + LA+++ V
Sbjct: 178 VWTWGAGKRGQ--LGRLEEGRCPTVSKQTGKVQLDVESS-IVAVKAGSYHSLALTEDKRV 234
Query: 200 FGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+ WG ++YGQ+ + P SQ +S + V G+ T+L +
Sbjct: 235 WTWGRADYGQLGRFGDRTVMPHSCSQPAELSSLYGVKQVGTIPTVLEN 282
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG+ FT+ T+ +LF G N+ QLG P KG+ +P PV
Sbjct: 106 VDTVACGWDFTLAVTEDG----QLFSWGSNAFGQLGV--PEVKGH--------TSVPTPV 151
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ +I +A G H + + D +T+G GQ GR EE C ++
Sbjct: 152 QTLQGVRIVGVAAGLRHAVALDDTGSVWTWGAGKRGQLGR---LEEGR-----CPTVSKQ 203
Query: 123 EGE-------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
G+ I+ G H+L LTE +V++ G GQ G
Sbjct: 204 TGKVQLDVESSIVAVKAGSYHSLALTEDKRVWTWGRADYGQLG 246
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 122/245 (49%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C + + + D CG HT F+ + G VY+CG
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFIN---KNVRDVGCGNRHTGFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI- 210
GQ LGH +++ P V G ++ + IV +S LA++DKG VF WG++ +GQI
Sbjct: 61 NDLGQ--LGHDKSRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIG 117
Query: 211 -SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
S +E I PR + + +IV VA G L+ E +YSWG YG LG G +
Sbjct: 118 VSIAEDYIRVPRNIKSLSDI-QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ P I S L G + AG A+T G ++ WG+N++GQLGL
Sbjct: 177 KESAPRHIKS-LSG-------IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDET 228
Query: 327 DQPFP 331
D+ P
Sbjct: 229 DRSDP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 43/319 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLATGRAHTIVITD 85
++ CG N QLG+ RKK P V QI ++ G AHT+ + D
Sbjct: 55 VYTCGCNDLGQLGHDKSRKK-------------PEQVGALDAQIIVAVSCGEAHTLALND 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ + GQ G I EDY NI L +I+ CG H+L L++
Sbjct: 102 KGQVFSWGHAAHGQIGVSIA--EDYIR--VPRNIKSLSDIQIVQVACGHHHSLALSKESN 157
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+YS G GQ GLG +E+ + G +++ A++ G +FGWG +
Sbjct: 158 IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRN 217
Query: 206 EYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPK 264
++GQ+ E S P +L + +I+ + G L EG V+++G G GQ
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-----PC----TFGAITNFGHLYMWGKN 315
S S H+ NP+ KV L+ C T + + G +Y +G
Sbjct: 277 NSAS-------------HEVNPR-KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322
Query: 316 QYGQLGLGTVEDQPFPLKV 334
GQLG+G+ ++ P V
Sbjct: 323 GNGQLGIGSTSNKKSPSMV 341
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G G + T S +FG G N QLG +D + +P ++ +R
Sbjct: 190 IPFAHIAAGGGHSFALTISG----AIFGWGRNKFGQLGLNDETDRSDPA--LLKSLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 241 -----SQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL F+ SG++YS G G +GQ G+G +N+++P +V+G
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343
>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
Length = 453
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 164/354 (46%), Gaps = 49/354 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++ DI CG+ T++ +K KD+ L+ CG S + K+ N ++ S V
Sbjct: 95 LECKDIVCGHYHTMLVSKEKDQ---LYSCGWTS--FVAMDRVNKETNFKSIIPSLVT--- 146
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE----DYQGKWFCH 117
P+K +IK +A GR HT+V+T++ F+FG S Q G G + + + +
Sbjct: 147 PLK--DFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLG 204
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
NI LE CG H+L LT G +++ G+ D QTG G E P + I+
Sbjct: 205 NIIKLE--------CGWGHSLVLTSDGDIFTWGFTQDSQTGHGF---SEEPIHIPKMIKT 253
Query: 178 E-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE---------MQISTPRVLSQCK 227
+ + + D LA+++ G V WG+ E+GQ+ + +Q P V +
Sbjct: 254 NYKFKNIFTGSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLI 313
Query: 228 GVSRIVD---VASGGSACTMLNDEG--LVYSW-GYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
+RI + VA G S +++++G L W G G LG G K + PT + G+
Sbjct: 314 NTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGE 373
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
KV + AG IT G LY+WG G+LG G +V DQ PL++
Sbjct: 374 -------KVVKVSAGRNHSACITESGKLYIWGNGNKGKLGNGKSVGDQLTPLEL 420
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 147/361 (40%), Gaps = 54/361 (14%)
Query: 13 FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK-------- 64
F + ++ N L+ CG D +LG + ELV F P +
Sbjct: 35 FLNINKRNYTTNKYLYSCGCGIDGKLGIDN--------ELV-KFESFPTKLTKFDNGENN 85
Query: 65 ------HPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ + K + G HT++++ + + ++ G SF R V +E
Sbjct: 86 GASQRYQDNLECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDR--VNKETNFKSIIPS 143
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L+ KI G+ HTL LTE +V+S G G++ Q G+G NQ P + +
Sbjct: 144 LVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKL 203
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDV 235
I+KL L ++ GD+F WG ++ Q SE I P+++ K + ++
Sbjct: 204 GNIIKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMI---KTNYKFKNI 260
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ----------GPKVSRSMKPTLIPSTLFGQHQFN 285
+G + ++G V SWG G GQ PK+ +S++P L+ + L ++
Sbjct: 261 FTGSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQP-LVHTNLINTNRIY 319
Query: 286 PKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQ---PFPLKVAVGGQ 339
V C F I N G L G N GQLG G D P L+ G+
Sbjct: 320 EYKMV------ACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGE 373
Query: 340 K 340
K
Sbjct: 374 K 374
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G H +L +++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNA----GLVPYHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+VF WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 191 MCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLTGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N P + + +++++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + + G V+ WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVVV 281
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLTGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNAGLVPYHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ N G +++WG N GQLGLG+ +QP P +VA
Sbjct: 180 --NKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVA 228
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G H +L +++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNA----GLVPYHISTNLSNKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+VF WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 191 MCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 249
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 250 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 299
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 300 AKTQGGHVYMWGQ 312
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N P + + +++++++ L ++ G+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + + G V+ WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 264 QLGTGNKSNQSYPTPVVV 281
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 16/232 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ +++ C + L+ T + +++ G G GLG + +
Sbjct: 5 GKWPIFSLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 65 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNAGLVPYHIS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 123 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 179
Query: 285 NPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
SKV IA G A+ N G +++WG N GQLGLG+ +QP P +VA
Sbjct: 180 ---SKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVA 228
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G H +L +++
Sbjct: 92 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNA----GLVPYHISTNLSNKQV 147
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 148 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQ 207
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV + G+VF WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 208 MCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 266
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG VY+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 267 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 316
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 317 AKTQGGHVYMWGQ 329
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 52 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 106
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N P + + +++++++ L ++ G+V
Sbjct: 107 ATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEV 166
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + + G V+ WGY
Sbjct: 167 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNG 226
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 227 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 280
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 281 QLGTGNKSNQSYPTPVVV 298
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 16/232 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ +++ C + L+ T + +++ G G GLG + +
Sbjct: 22 GKWPIFSLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 81
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 82 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNAGLVPYHIS 139
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 140 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 196
Query: 285 NPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
SKV IA G A+ N G +++WG N GQLGLG+ +QP P +VA
Sbjct: 197 ---SKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVA 245
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 145/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ AC +G +N ++F G+N LG D + P L
Sbjct: 59 LKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLD-------- 110
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G +V+ EG +T+G+N++ Q G G G C
Sbjct: 111 --SLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTN----HGLVPCQVST 164
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +K+++ CG H++ LT G+VY+ G+ GQ G G NQ P V ++ + +
Sbjct: 165 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV 224
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G
Sbjct: 225 VNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGC 283
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ +L DEG +Y+WG YG LG G K ++S T+ K +V + A
Sbjct: 284 AHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVD----------KDRVIEIAAC 333
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T G +YMWG+
Sbjct: 334 HSAHTSAAKTQSGQVYMWGQ 353
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 31/272 (11%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD---- 135
+ +T+N+ F G N G G G VQ + +E ++ +D++CG+
Sbjct: 75 VLYVTENDEVFVLGMNCSGCLGTGDVQ-------------STIEPKR-LDSLCGKKIACL 120
Query: 136 ------HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
H + TE G+VY+ G A Q G G N+ PC V + +++++++
Sbjct: 121 SYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHH 180
Query: 190 VLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+ ++ G+V+ WG + GQ+ S S PR ++ C +V++A G + +
Sbjct: 181 SMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVEN 240
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G VY WGY GQ S +PT P + +V+ + G +T+ G
Sbjct: 241 GEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGI----RVQRVACGCAHTLVLTDEGQ 294
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+Y WG N YGQLG G +Q +P V V +
Sbjct: 295 IYAWGANSYGQLGTGNKSNQSYPTTVTVDKDR 326
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 35/339 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG G TVV T + ++ G D +LG+ D K P R+
Sbjct: 35 RIVQIACGSGHTVVLTDEGE----VYTWGRGDDGRLGHGDNGWKFVP--------RLVEE 82
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ I+ + G HT +T + +T+G +G+ G G E + + + L
Sbjct: 83 LR--GKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHG--NETGHSTPFL---VETL 135
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIV 181
+G ++ CG HT+ L E+ VY+ G +G +G G +Q PC V E+ G+ IV
Sbjct: 136 KGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVE-ELRGKNIV 194
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
++S+ A+S+ G+VF +G ++G++ SE R + G R+ VA GG
Sbjct: 195 QISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAG-KRVKQVACGGF 253
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ + G VY+WG +G LG G KV++++ PT + S + + V + G
Sbjct: 254 HTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV-PTRVESLV--------EKLVVQITCGW 304
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T+ G +Y WG +G+LG P V V
Sbjct: 305 SHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDV 343
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 141/313 (45%), Gaps = 27/313 (8%)
Query: 25 LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
+ ++ G D QLG D + P +P+ +I +A G HT+V+T
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRP---------VPIDAL-AERRIVQIACGSGHTVVLT 50
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
D +T+G G+ G G D K+ + +L G+ I CG HT +T SG
Sbjct: 51 DEGEVYTWGRGDDGRLGHG-----DNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSG 105
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+Y+ G G G+ G G+ TP LV ++G ++ +++ + + + DV+ WG+
Sbjct: 106 DLYTWGGGMYGKLGHGNETGHSTPFLVE-TLKGMQVRQVACGSRHTVVLLENKDVYTWGD 164
Query: 205 SEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ- 261
E G ++E P + + +G IV +++ G L++ G V+++G G G+
Sbjct: 165 KENGVSGHGDTEGHQYLPCPVEELRG-KNIVQISACGFHTAALSEFGEVFTFGEGKFGRL 223
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G R+ L G+ +V+ + G A+T G +Y WG ++GQLG
Sbjct: 224 GHNSERNQPVARFVEALAGK-------RVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276
Query: 322 LGTVEDQPFPLKV 334
G ++ P +V
Sbjct: 277 HGDKVNKTVPTRV 289
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 23/248 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ +ACG TVV ++KD ++ G + G+ D +G+ +P
Sbjct: 138 MQVRQVACGSRHTVVLLENKD----VYTWGDKENGVSGHGDT--EGHQY--------LPC 183
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ I ++ HT +++ FTFG FG+ G E + F +A
Sbjct: 184 PVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHN--SERNQPVARFVEALA 241
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
G+++ CG HT +TE+G+VY+ G G GQ G G N+ P V +E + +
Sbjct: 242 ---GKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVE-KLV 297
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGG 239
V+++ +A++D G+V+ WGN ++G++ ++ +++ P+++ +G R++ VAS
Sbjct: 298 VQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEG-KRVISVASYN 356
Query: 240 SACTMLND 247
L D
Sbjct: 357 EHTVALVD 364
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 145/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ AC +G +N ++F G+N LG D + P L
Sbjct: 58 LKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLD-------- 109
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G +V+ EG +T+G+N++ Q G G G C
Sbjct: 110 --SLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTN----HGLVPCQVST 163
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +K+++ CG H++ LT G+VY+ G+ GQ G G NQ P V ++ + +
Sbjct: 164 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV 223
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV + G+V+ WG + GQ+ S TP ++ +G+ R+ VA G
Sbjct: 224 VNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVACGC 282
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ +L DEG +Y+WG YG LG G K ++S T+ K +V + A
Sbjct: 283 AHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVD----------KDRVVEIAAC 332
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T G +YMWG+
Sbjct: 333 HSAHTSAAKTQSGQVYMWGQ 352
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 31/272 (11%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD---- 135
+ +T+N+ F G N G G G +Q + +E ++ +D++CG+
Sbjct: 74 VLYVTENDEVFVLGMNCSGCLGTGDIQ-------------STIEPKR-LDSLCGKKIACL 119
Query: 136 ------HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
H + TE G+VY+ G A Q G G N+ PC V + +++++++
Sbjct: 120 SYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHH 179
Query: 190 VLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+ ++ G+V+ WG + GQ+ S S PR ++ C +V++A G + +
Sbjct: 180 SMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVEN 239
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G VY WGY GQ S +PT P + +V+ + G +T+ G
Sbjct: 240 GEVYVWGYNGNGQLGLGSSGNQPT--PCRIAALQGI----RVQRVACGCAHTLVLTDEGQ 293
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+Y WG N YGQLG G +Q +P V V +
Sbjct: 294 IYAWGANSYGQLGTGNKSNQSYPTTVTVDKDR 325
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
+ +T N+ F G NS G G G D Q I L G++I+ G H +
Sbjct: 33 VLYLTKNDEVFVMGTNSSGCLGTG-----DAQSILEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T G+VYS G A Q G G N +PC V + ++ + ++ + ++ G+
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGE 147
Query: 199 VFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
V+ WG + GQ+ S S PR ++ C ++ +A G + + D G VY+WGY
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYN 207
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ S +PT P + +VE ++ G A+T+ G +Y WG N Y
Sbjct: 208 GNGQLGLGSSGNQPT--PCRIAALQGI----RVEQVVCGYAHTLALTDEGVMYAWGANSY 261
Query: 318 GQLGLGTVEDQPFPLKVAVGGQK 340
GQLG G +Q +P++V V ++
Sbjct: 262 GQLGTGNKSNQSYPVQVIVDKER 284
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 32/299 (10%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA-HTI 81
KN ++F G NS LG D + P + M +I L+ G H +
Sbjct: 38 KNDEVFVMGTNSSGCLGTGDAQSILEPRRIDML----------SGKRIVSLSYGSGPHVV 87
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T + +++G+N++ Q G G Q C +L +K + CG H++ LT
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTN----QALSPCQVSTNLINKKAISVACGSHHSMVLT 143
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+VY+ G+ GQ G G NQ P V ++ + ++ ++ +AV D G+V+
Sbjct: 144 CDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYA 203
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG + GQ+ S TP ++ +G+ R+ V G + L DEG++Y+WG YG
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVEQVVCGYAHTLALTDEGVMYAWGANSYG 262
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYMWGK 314
LG G K ++S +I K ++ + A T A + G +YMWG+
Sbjct: 263 QLGTGNKSNQSYPVQVIVD----------KERIVEIAACHSSHTSAAKSQSGQVYMWGQ 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 112 GKWFCHNIADLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
GKW + E K + C + L+LT++ +V+ G + G G G + P
Sbjct: 5 GKWPIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEP 64
Query: 169 CLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC 226
+ + G+RIV LS S V+ SD G+V+ WG++ Y Q+ ST + LS C
Sbjct: 65 RRI-DMLSGKRIVSLSYGSGPHVVIVTSD-GEVYSWGHNAYSQLGNG----STNQALSPC 118
Query: 227 KGVSRIVD-----VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
+ + +++ VA G +L +G VY+WGY GQ S + +P IP +
Sbjct: 119 QVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQP--IPRKVTSC 176
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
Q V + G + A+ + G +Y WG N GQLGLG+ +QP P ++A
Sbjct: 177 LQ---NKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIA 227
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 19/261 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
IVIT ++ + G+N G G D Q I L +KI+D G H L
Sbjct: 42 IVITQDDDVYALGSNCSSCLGVG-----DAQSGLEPRKIDILCKKKIVDIGYGSGPHVLV 96
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T++G +YS G Q G G N +P L+ + G ++VK++ LA++ +G+V
Sbjct: 97 CTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGEV 156
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S + +TPR ++ C G ++ ++A G ++ L D G VY WGY
Sbjct: 157 FAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNG 216
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G V+ +P P + Q V ++ G A+T+ G +Y WG N
Sbjct: 217 NGQLGVGNNVN---QPN--PCRVAALQQM----IVVQIVCGYAHAMALTDEGSVYAWGAN 267
Query: 316 QYGQLGLGTVEDQPFPLKVAV 336
YGQLG G + P K+A+
Sbjct: 268 SYGQLGTGNKANLVTPTKIAL 288
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 29/246 (11%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H +V TDN +++G+N + Q G G QG +L G K++ CG H+L
Sbjct: 93 HVLVCTDNGDLYSWGHNGYSQLGNGSTN----QGLSPQLITTNLIGRKVVKVACGSHHSL 148
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+V++ G+ GQ G G NQ TP V + ++ +++ +A+ D G+
Sbjct: 149 ALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGE 208
Query: 199 VFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+GWG + GQ + + Q + RV + + + +V + G + L DEG VY+WG
Sbjct: 209 VYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMI--VVQIVCGYAHAMALTDEGSVYAWGA 266
Query: 256 --YGLLGQGPKVSRSMKPTLIP-----STLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YG LG G K + + PT I G +N S AIT G
Sbjct: 267 NSYGQLGTGNKANL-VTPTKIALDKGRFVEIGATHYNHVS------------SAITQTGK 313
Query: 309 LYMWGK 314
+YMWG+
Sbjct: 314 VYMWGQ 319
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 51/261 (19%)
Query: 3 KITDIACGYG-FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
KI DI G G +V T + D L+ G N SQLG + +P + + +
Sbjct: 82 KIVDIGYGSGPHVLVCTDNGD----LYSWGHNGYSQLGNGSTNQGLSPQLITTNLI---- 133
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G H++ +T F +G N+ GQ G G + K A
Sbjct: 134 -----GRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKV----AAC 184
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L K+ + CGQ ++ L ++G+VY G+ +GQ G+G+ NQ PC V ++ +V
Sbjct: 185 LGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRV-AALQQMIVV 243
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYG--------------------------------Q 209
++ +A++D+G V+ WG + YG
Sbjct: 244 QIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKIALDKGRFVEIGATHYNH 303
Query: 210 ISESEMQISTPRVLSQCKGVS 230
+S + Q + QC+G S
Sbjct: 304 VSSAITQTGKVYMWGQCRGQS 324
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G ++ + ++ L
Sbjct: 1 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ-----LSAL 55
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 56 DGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 114
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKXVAAGAE 173
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R + P + ST K + G
Sbjct: 174 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKXSXVACGW 224
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 225 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 261
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 143/329 (43%), Gaps = 25/329 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S +++ G +LG+ GN +L F +P+
Sbjct: 59 QIVSVTCGADHTVAYSQS---GXEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 106
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 107 ALH-GIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 160
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG ++ P V GE+
Sbjct: 161 EGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKXSX 219
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ ++VS G ++ +G S+YGQ+ +++ + S I ++ G
Sbjct: 220 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHT 279
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G +Y WG+ GQ + + + + Q +F KV + G A
Sbjct: 280 XALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHTLA 333
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T +++ WG+ GQLG+G D+ FP
Sbjct: 334 VTERNNVFAWGRGTNGQLGIGESVDRNFP 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 6 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 64
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 65 CGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 123
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 124 LAVTXEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKXVAAGAEH 174
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 175 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 216
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K + +ACG+ T+ + S L+ G + QLG+ D LE + IP
Sbjct: 216 KXSXVACGWRHTISVSYSG----ALYTYGWSKYGQLGHGD-------LEDHL----IPHK 260
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--NI 119
++ S I ++ G HT +T + + +G N FGQ G G ++ C +
Sbjct: 261 LEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQ-------CSPVQV 313
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ +K++ CG HTL +TE V++ G G +GQ G+G ++ P ++
Sbjct: 314 RFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 365
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
+ +T N+ F G NS G G G D Q I L G++I+ G H +
Sbjct: 33 VLYLTKNDEVFVMGTNSSGCLGTG-----DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T G+VYS G A Q G G N +PC V + ++ + ++ + ++ G+
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGE 147
Query: 199 VFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
V+ WG + GQ+ S S PR ++ C ++ +A G + + D G VY+WGY
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYN 207
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ S +PT P + +VE ++ G A+T+ G +Y WG N Y
Sbjct: 208 GNGQLGLGSSGNQPT--PCRIAALQGI----RVEQVVCGYAHTLALTDEGVMYAWGANSY 261
Query: 318 GQLGLGTVEDQPFPLKVAVGGQK 340
GQLG G +Q +P++V V ++
Sbjct: 262 GQLGTGNKSNQSYPVQVIVDKER 284
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 32/299 (10%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA-HTI 81
KN ++F G NS LG D + P + M +I L+ G H +
Sbjct: 38 KNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDML----------SGKRIVSLSYGSGPHVV 87
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T + +++G+N++ Q G G Q C +L +K + CG H++ LT
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTN----QALSPCQVSTNLINKKAISVACGSHHSMVLT 143
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+VY+ G+ GQ G G NQ P V ++ + ++ ++ +AV D G+V+
Sbjct: 144 CDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYA 203
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG + GQ+ S TP ++ +G+ R+ V G + L DEG++Y+WG YG
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVEQVVCGYAHTLALTDEGVMYAWGANSYG 262
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYMWGK 314
LG G K ++S +I K ++ + A T A + G +YMWG+
Sbjct: 263 QLGTGNKSNQSYPVQVIVD----------KERIVEIAACHSSHTSAAKSQSGQVYMWGQ 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 112 GKWFCHNIADLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
GKW + E K + C + L+LT++ +V+ G + G G G + P
Sbjct: 5 GKWPIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEP 64
Query: 169 CLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC 226
+ + G+RIV LS S V+ SD G+V+ WG++ Y Q+ ST + LS C
Sbjct: 65 RRI-DMLSGKRIVSLSYGSGPHVVIVTSD-GEVYSWGHNAYSQLGNG----STNQALSPC 118
Query: 227 KGVSRIVD-----VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
+ + +++ VA G +L +G VY+WGY GQ S + +P IP +
Sbjct: 119 QVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQP--IPRKVTSC 176
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
Q V + G + A+ + G +Y WG N GQLGLG+ +QP P ++A
Sbjct: 177 LQ---NKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIA 227
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 30/332 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I+ +ACG T + ++ L ++ G +LG+ GN +L +P P
Sbjct: 58 EISLVACGADHTTAYSATR---LTIYSWGWGDFGRLGH------GNSSDLF-----VPHP 103
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +I+ +A G +H + +T + +++G N GQ G G D H +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLG-----DTDDSLVPHKLLA 158
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG + G +HT +T+SGK+Y GWG G GLG ++ P V + E++
Sbjct: 159 FEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPA-VGDEKMC 217
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ +AVS G ++ +G S+YGQ+ + I V+ G
Sbjct: 218 MVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRH 277
Query: 242 CTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L + G +Y WG+ GQ V P LI ++ GQHQ +V + G
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLI--SIPGQHQ-----RVVQVSCGWRH 330
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T+ ++Y WG+ GQLG G D+ P
Sbjct: 331 TVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAP 362
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 135/313 (43%), Gaps = 29/313 (9%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P RI + +I +A G HT +
Sbjct: 30 GRGEDGQLGHGDAEDRLLP--------RIIGALN--DCEISLVACGADHTTAYSATRLTI 79
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + H I L+G +I CG H L +T G+VYS
Sbjct: 80 YSWGWGDFGRLGHG-----NSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSW 134
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG ++ P + EG + L++ + AV+D G ++GWG YG
Sbjct: 135 GRNQNGQLGLGDTDDSLVPHKLLA-FEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGN 193
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + G ++ VA G ++ G +Y++G YG LG G
Sbjct: 194 LGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYAD 253
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
L+P + +FN + + G A+T G LY WG N++GQ+G G V+
Sbjct: 254 H-----LLPHQVAALAEFN----ITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVD 304
Query: 327 DQPFPLKVAVGGQ 339
D P +++ GQ
Sbjct: 305 DHTSPQLISIPGQ 317
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G +HT+ + + +FG GQ G G D + + I L +I C
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHG-----DAEDRLLPRIIGALNDCEISLVAC 64
Query: 133 GQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G DHT + + +YS GWG G+ G G+ ++ P ++ ++G I +++ L
Sbjct: 65 GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA-LQGLEIRQIACGDSHCL 123
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV+ G+V+ WG ++ GQ+ + S P L +GVS + +A+G + D G
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAEHTAAVTDSGK 182
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y WG YG LG G + R M P +P+ K+ + G A++ G
Sbjct: 183 LYGWGWGRYGNLGLGDRGDR-MLPAEVPAV--------GDEKMCMVACGWRHTIAVSQSG 233
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
LY +G ++YGQLG G D P +VA
Sbjct: 234 KLYTYGWSKYGQLGHGDYADHLLPHQVAA 262
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +A G T T S KL+G G LG D +G+ + L
Sbjct: 162 VSVKMLAAGAEHTAAVTDSG----KLYGWGWGRYGNLGLGD---RGDRM----------L 204
Query: 62 PVKHPST---QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P + P+ ++ +A G HTI ++ + +T+G + +GQ G G DY H
Sbjct: 205 PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHG-----DYADHLLPHQ 259
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+A L I G HT+ LTE+GK+Y GW GQ G G +++ +P L+ + +
Sbjct: 260 VAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQ 319
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVL-------SQCKGVS 230
R+V++S +AV+DK +V+ WG GQ+ + + S P+ + S C+G+
Sbjct: 320 RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGSACEGLE 379
Query: 231 RIVDVASGGS 240
+ + A GS
Sbjct: 380 KSPEPAVTGS 389
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G HT+ L V S G G DGQ G G ++ P ++ G + I ++
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRII-GALNDCEISLVA 63
Query: 185 SAVDCVLAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D A S + ++ WG ++G++ + + P + +G+ I +A G S C
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGL-EIRQIACGDSHC 122
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +G VYSWG G LG G +L+P L F S V+ L AG
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLG-----DTDDSLVPHKLLA---FEGVS-VKMLAAGAEH 173
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T+ G LY WG +YG LGLG D+ P +V AVG +K
Sbjct: 174 TAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEK 215
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 42/298 (14%)
Query: 54 MSFVRIPLPVKHPS---TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
MS +P P+ + ++ ++A G+ HT +T+N G + +G + +GQ G G V E Y
Sbjct: 860 MSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNN-GVYAWGCSKYGQLGLGDVYESPY 918
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
I L E ++ CGQ HTL LTE G+V++ GWG GQ GLG++++Q P
Sbjct: 919 P-----RLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVC 973
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
V ++ + I +++ L +SDKG +F +G+ +GQ+ S+ VL Q G+S
Sbjct: 974 V-NHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQ--GIS 1030
Query: 231 -RIVDVASG---GSAC-----TMLNDEGLVYSWGYGLLGQ----GPKVSRSMKPTLIPST 277
+I+ +A+G +C +L G VY+WG L GQ G K PT
Sbjct: 1031 EKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHK--EVTAPT----- 1083
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAI--TNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
Q N + I+ C F A G ++ WG N GQ+ V + P+K
Sbjct: 1084 -----QINENTFKADCISCGCEFTAAQEKQTGKIFCWGSNSVGQV---RVTNLAIPVK 1133
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 123/276 (44%), Gaps = 32/276 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG-IVQEEDYQGKWFCHNIADLEGEKIMDAV 131
L G HT +I N +T+G G G+G + N LE ++
Sbjct: 828 LNCGYGHTALIR-NGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLE---VLYVA 883
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HT LT +G VY+ G GQ GLG + P L+ + E ++ LS L
Sbjct: 884 CGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITS-LANENVITLSCGQFHTL 941
Query: 192 AVSDKGDVFGWGNSEYGQ-----ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A+++KG VF WG +GQ I + + + + Q I D+A+G +L+
Sbjct: 942 ALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQV-----IKDIAAGHGHSLVLS 996
Query: 247 DEGLVYSWGYGLLGQ--GPKVSRSMKPTLI-----PSTLFGQHQFNPKSKVESLIAGPCT 299
D+G ++S+G G+ GQ ++S P LI L F+ I+ C
Sbjct: 997 DKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHS-------ISCGCH 1049
Query: 300 FGAI-TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ T G +Y WG++ GQLG G ++ P ++
Sbjct: 1050 HSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQI 1085
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 58 RIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY----QG 112
R+P+ V H Q IK +A G H++V++D F+FG+ FGQ G G + QG
Sbjct: 969 RLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQG 1028
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
I + CG H+ LT SG VY+ G DGQ G G P
Sbjct: 1029 --ISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAP---- 1082
Query: 173 GEIEGERIVKLSSAVDCV------LAVSDK--GDVFGWGNSEYGQISESEMQISTPR--- 221
+I + + DC+ A +K G +F WG++ GQ+ + + I
Sbjct: 1083 -----TQINENTFKADCISCGCEFTAAQEKQTGKIFCWGSNSVGQVRVTNLAIPVKESAT 1137
Query: 222 --------VLSQCKGVSRIVD 234
+L CK + R++D
Sbjct: 1138 KSLDGKLVMLKSCKRIVRLLD 1158
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 182 KLSSAVDC---VLAVSDKGDVFGWGNSEYGQISE----SEMQISTPRVLSQCKGVSRIVD 234
K++S ++C A+ G ++ WG + G + + S + +P L C + ++
Sbjct: 823 KINSVLNCGYGHTALIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKL-EVLY 881
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G + T L + G VY+WG YG LG G V S P LI S V
Sbjct: 882 VACGKNHTTALTNNG-VYAWGCSKYGQLGLG-DVYESPYPRLITSL--------ANENVI 931
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+L G A+T G ++ WG +GQLGLG ++DQ P+ V
Sbjct: 932 TLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCV 974
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 35/339 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG G TVV T+ + ++ G D +LG+ D K P R+
Sbjct: 35 RIVQIACGSGHTVVLTEEGE----VYTWGRGDDGRLGHGDNGWKFVP--------RLVEE 82
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ I+ + G HT +T + +T+G +G+ G G + G + + L
Sbjct: 83 LR--GKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHG-----NETGHSTPYLVETL 135
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIV 181
+ ++ CG HT+ L E+ VY+ G +G +G G +Q PC V E+ G+ IV
Sbjct: 136 KSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVE-ELRGKSIV 194
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
++S+ A+S+ G+VF +G ++G++ SE R + G R+ VA GG
Sbjct: 195 QISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAG-KRVKQVACGGF 253
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ + G VY+WG +G LG G KV++++ PT + S L + V + G
Sbjct: 254 HTAAVTETGEVYTWGGGEHGQLGHGDKVNKTV-PTRVESLL--------EKLVLQITCGW 304
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+T+ G +Y WG +G+LG P V V
Sbjct: 305 SHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDV 343
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 27/313 (8%)
Query: 25 LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
+ ++ G D QLG D + P +P+ +I +A G HT+V+T
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRP---------VPIDAL-AERRIVQIACGSGHTVVLT 50
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ +T+G G+ G G D K+ + +L G+ I CG HT +T SG
Sbjct: 51 EEGEVYTWGRGDDGRLGHG-----DNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSG 105
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+Y+ G G G+ G G+ TP LV ++ ++ +++ + + + DV+ WG+
Sbjct: 106 DLYTWGGGMYGKLGHGNETGHSTPYLVE-TLKSMQVRQVACGSRHTVVLLENKDVYTWGD 164
Query: 205 SEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ- 261
E G ++E P + + +G S IV +++ G L++ G V+++G G G+
Sbjct: 165 KENGVSGHGDTEGHQYLPCPVEELRGKS-IVQISACGFHTAALSEFGEVFTFGEGKFGRL 223
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G R+ L G+ +V+ + G A+T G +Y WG ++GQLG
Sbjct: 224 GHNSERNQPVARFVDALAGK-------RVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276
Query: 322 LGTVEDQPFPLKV 334
G ++ P +V
Sbjct: 277 HGDKVNKTVPTRV 289
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 23/248 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ +ACG TVV ++KD ++ G + G+ D +G+ +P
Sbjct: 138 MQVRQVACGSRHTVVLLENKD----VYTWGDKENGVSGHGDT--EGHQY--------LPC 183
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ I ++ HT +++ FTFG FG+ G E + F +A
Sbjct: 184 PVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHN--SERNQPVARFVDALA 241
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
G+++ CG HT +TE+G+VY+ G G GQ G G N+ P V +E + +
Sbjct: 242 ---GKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE-KLV 297
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGG 239
++++ + ++D G+V+ WGN ++G++ ++ +++ P+ + G R++ VAS
Sbjct: 298 LQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDG-KRVISVASYN 356
Query: 240 SACTMLND 247
L D
Sbjct: 357 EHTVALVD 364
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G C+ +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCYISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ + VA G + +L
Sbjct: 215 MCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-HVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT I K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PTPISV---------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T G++YMWG+
Sbjct: 324 AKTQGGNVYMWGQ 336
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 15/259 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNNEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C +V++A G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIP-STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ S +PT + L G H V+ + G +T+ G +Y WG N Y
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIH-------VQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 318 GQLGLGTVEDQPFPLKVAV 336
GQLG G +Q +P ++V
Sbjct: 287 GQLGTGNKSNQSYPTPISV 305
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCYIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 21/242 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H +V T +T+G+N++ Q G G G CH +L +K+++ CG H+L
Sbjct: 280 HVVVATAEGEVYTWGHNAYSQLGNGTTN----HGLIPCHVSTNLVNKKVVEVACGSHHSL 335
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+VY+ G+ GQ G G NQ P V ++ + ++ C +AV + G+
Sbjct: 336 VLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGE 395
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
V+ WG + GQ+ S TP ++ +G+ R+ V G + +L DEG +Y+WG
Sbjct: 396 VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVQRVTCGYAHTLVLTDEGQLYAWGAN 454
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYMW 312
YG LG G K ++S P +P K ++ + A T A T GH+YMW
Sbjct: 455 SYGQLGTGNKSNQSY-PIPVPVE---------KDRIIEIAACHSAHTSAAKTQSGHVYMW 504
Query: 313 GK 314
G+
Sbjct: 505 GQ 506
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 112/255 (43%), Gaps = 13/255 (5%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFLTE 142
T+N+ F G N G G G D Q I L G+KI G H + T
Sbjct: 232 TENDEVFVLGTNCSGCLGTG-----DVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATA 286
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+VY+ G A Q G G N+ PC V + +++V+++ L ++ G+V+ W
Sbjct: 287 EGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAW 346
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ S S PR ++ C ++A G + + G VY WGY GQ
Sbjct: 347 GYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQ 406
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
S +PT P + +V+ + G +T+ G LY WG N YGQLG
Sbjct: 407 LGLGSSGNQPT--PCRIAALQGI----RVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLG 460
Query: 322 LGTVEDQPFPLKVAV 336
G +Q +P+ V V
Sbjct: 461 TGNKSNQSYPIPVPV 475
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 121/248 (48%), Gaps = 26/248 (10%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C + +K+ D CG HT+F+ + G VY+CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVN---KKVQDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-- 209
GQ LGH +++ P V G ++ + IV +S LA++DKG V+ WG + GQ
Sbjct: 61 NDLGQ--LGHEKSRKRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLG 117
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+S +E PR + + +IV VA G L+ V+SWG YG LG G +
Sbjct: 118 LSGTEEYTRVPRNIKSLSDI-QIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 267 RSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P +I S L F Q + AG +T G ++ WG+N++GQLGL
Sbjct: 177 KQASPQIIKSLLGIPFAQ-----------IAAGGAHSFVLTLSGAVFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G ++ Q + L+ +
Sbjct: 33 NKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRPEQ-------VGALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G+ DGQ GL G P ++ + +IV+++
Sbjct: 86 IVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ E + Q ++P+++ G+ +A+GG+
Sbjct: 145 GYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ-ASPQIIKSLLGIP-FAQIAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G V+ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAVFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYISCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKV 288
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 149/345 (43%), Gaps = 51/345 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RK+ P
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKR-------------PEQ 77
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V Q I ++ G AHT+ + D + +G GQ G +E + NI
Sbjct: 78 VGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPR----NIKS 133
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERI 180
L +I+ CG H+L L++ +V+S G GQ GLG+ Q +P +++ + G
Sbjct: 134 LSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLL-GIPF 192
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGG 239
++++ ++ G VFGWG +++GQ+ E P +L + +IV ++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGE 251
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L EG V+++G G GQ S + H+ NP+ KV L+ T
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTA-------------HEINPR-KVFELMGNIVT 297
Query: 300 FGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
A + + G +Y +G GQLG+GT ++ PFP+K
Sbjct: 298 QIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVK 342
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFAQIAAGGAHSFVLTLSG----AVFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I +++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ +G++YS G G +GQ G+G +N+++P V+G
Sbjct: 291 LMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKG 343
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 148/320 (46%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ AC +G N ++F G N LG D + P RI +
Sbjct: 18 LKLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPR-------RIDV 70
Query: 62 PVKHPSTQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G H + T + F++G+N + Q G G G
Sbjct: 71 LC---GKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGT----STHGLTPALVST 123
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L G+++++ CG HT+ LT G+V++ G+ GQ G G NQ TP V ++ + +
Sbjct: 124 NLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV 183
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV D G+++GWG + GQ+ + TP ++ +GV+ ++ VA G
Sbjct: 184 VNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVN-VIQVACGY 242
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L DEG VYSWG YG LG G K ++++ PTLI + K ++ + A
Sbjct: 243 AHTIALTDEGFVYSWGANSYGQLGTGNKCNQAV-PTLINT---------EKERMSEVAAC 292
Query: 297 PC--TFGAITNFGHLYMWGK 314
T A T G + MWG+
Sbjct: 293 HTSHTSAAKTQSGQVLMWGQ 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 116/255 (45%), Gaps = 17/255 (6%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +T N+ F G N G G G D Q I L G+KI+ G H
Sbjct: 35 LYVTVNDEVFALGTNCSGCLGLG-----DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAI 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
T G+V+S WG +G + LG+ + TP LV + G+R+++++ +A++ G
Sbjct: 90 ATADGEVFS--WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S S TPR +S C +V++A G + D G +Y WGY
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGY 207
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
GQ + + T P + N V + G A+T+ G +Y WG N
Sbjct: 208 NCNGQLGLGNNGNQQT--PCRIAALQGVN----VIQVACGYAHTIALTDEGFVYSWGANS 261
Query: 317 YGQLGLGTVEDQPFP 331
YGQLG G +Q P
Sbjct: 262 YGQLGTGNKCNQAVP 276
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW + E K++ C + L++T + +V++ G G GLG L +
Sbjct: 5 GKWPVFALLPPEELKLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIE 64
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDK-GDVFGWGNSEYGQISE-SEMQISTPRVLSQ 225
P + + G++IV LS +A++ G+VF WG++ Y Q+ + TP ++S
Sbjct: 65 PRRI-DVLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVST 123
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
R+++VA G L +G V++WGY GQ S + +PT P + Q
Sbjct: 124 NLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPT--PRRVSSCLQ-- 179
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y WG N GQLGLG +Q P ++A
Sbjct: 180 -NKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIA 228
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 138/267 (51%), Gaps = 27/267 (10%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
T+++T ++ + GNN++G G G Q Y K I L G+ + G+ H L
Sbjct: 39 TLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKK-----IEALCGKSVKTFAYGKGPHVL 93
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
LTE GKVYS WG + LG+ + E TP LV ++ + +V ++ LA+++K
Sbjct: 94 ALTEEGKVYS--WGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNK 151
Query: 197 GDVFGWGNSEYGQISESEMQIST----PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
G+++ WG++ GQ+ + +ST P++L+ ++V ++ G S+ + D G VY
Sbjct: 152 GEIYAWGHNVSGQVGCGTI-LSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVY 210
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG+ G LG G S+ ++P + + K +E ++ G A+++ G L
Sbjct: 211 SWGHNGVGQLGLGNCTSQ-VEPQKVATF--------AKIVIEKVVCGYMHTLALSDEGVL 261
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y+WG N YGQLGL T + P K+ V
Sbjct: 262 YVWGANSYGQLGLNTDSNVWIPTKLEV 288
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTM 244
A + L V+ V+G GN+ YG + + Q + P+ + G S G
Sbjct: 35 AANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLA 94
Query: 245 LNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +EG VYSWGY + + + PTL+PS L + K V+ G + A
Sbjct: 95 LTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVL------DDKFVVDIACGGHHSL-A 147
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVED--QPFP--LKVAVGGQK 340
+TN G +Y WG N GQ+G GT+ QP P L V + G+K
Sbjct: 148 LTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKK 189
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ DIACG G +A +K + ++ G N Q+G G L V ++ L V
Sbjct: 135 VVDIACG-GHHSLALTNKGE---IYAWGHNVSGQVG------CGTILSTVQPIPKL-LNV 183
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ H++ G + ++ +TD+ +++G+N GQ G G + K +A
Sbjct: 184 GLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQK-----VATFA 238
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
I VCG HTL L++ G +Y G + GQ GL +N P + G + +
Sbjct: 239 KIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRILDIV 298
Query: 184 SSAVDCV-LAVSDKGDVFGWG 203
+S + LA+S+ +F WG
Sbjct: 299 TSHYHHISLAMSEGNRIFMWG 319
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 123/245 (50%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN S+GQ G G + EE C G+++ D CG HT+FL + G VY+CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEF---FHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH +++ P V ++ + IV +S LA++DKG VF WG GQ+
Sbjct: 61 NDLGQ--LGHEKSRKKPEHVVA-LDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLG 117
Query: 212 ESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + + PR + +C +I VA G L+ G V+SWG +G LG G S
Sbjct: 118 LNNFEECVRVPRNI-KCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGS 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
P +I S Q P ++ L AG AIT G ++ WGKN++GQLGL +
Sbjct: 177 SISTPQIIQSL-----QGIPFAQ---LSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTK 228
Query: 327 DQPFP 331
D+ FP
Sbjct: 229 DRWFP 233
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G HT+ + D+ +T G N GQ G +++ ++ L+ + I+ CG+
Sbjct: 42 GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKKP-------EHVVALDAQIIVAVSCGES 94
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC----VL 191
HTL L + G+V+S G G++GQ GL NN E V I+ V+++ V C
Sbjct: 95 HTLALNDKGQVFSWGLGSNGQLGL---NNFEECVRVPRNIKCLSDVQIAQ-VACGYWHSH 150
Query: 192 AVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A+S G VF WG +++GQ+ ISTP+++ +G+ +++GG+ + G
Sbjct: 151 ALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIP-FAQLSAGGAHSFAITLSG 209
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+ WG +G LG R P L+ S +V + G A+T
Sbjct: 210 AVFGWGKNKFGQLGLNDTKDRWF-PALLKSL--------RSQRVIFVSCGEDHTAALTKL 260
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ +G YGQLG + P KV
Sbjct: 261 RGVFTFGAGGYGQLGHNCTNHEINPRKV 288
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK P +V +I +
Sbjct: 35 RVCDVGCGLKHTVFLLDDG----TVYTCGCNDLGQLGHEKSRKK--PEHVVALDAQIIVA 88
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + G +HT+ + D F++G S GQ G +E + NI L
Sbjct: 89 V----------SCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPR----NIKCL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I CG H+ L++ G+V+S G GQ GLG H ++ TP +++ ++G
Sbjct: 135 SDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS-LQGIPFA 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+LS+ A++ G VFGWG +++GQ+ ++ + L + R++ V+ G
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQ 261
L V+++G G GQ
Sbjct: 254 TAALTKLRGVFTFGAGGYGQ 273
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I +ACGY + +K ++F G N QLG + +++ S IP
Sbjct: 137 VQIAQVACGYWHSHALSKGG----QVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPF 192
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
L+ G AH+ IT + F +G N FGQ G D + +WF +
Sbjct: 193 ---------AQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLN-----DTKDRWFPALLKS 238
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L ++++ CG+DHT LT+ V++ G G GQ G N++ P V E+ G +
Sbjct: 239 LRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKV-FELMGNVVT 297
Query: 182 KLS 184
++S
Sbjct: 298 QIS 300
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++CG T+ DK ++F GL S+ QLG ++ + VR+P +
Sbjct: 86 IVAVSCGESHTLALN---DKG-QVFSWGLGSNGQLGLNNFEE----------CVRVPRNI 131
Query: 64 KHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K S QI +A G H+ ++ F++G N FGQ G G+ + I L
Sbjct: 132 KCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQI----IQSL 187
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERI 180
+G G H+ +T SG V+ GWG + GQ GL ++ P L++ + +R+
Sbjct: 188 QGIPFAQLSAGGAHSFAITLSGAVF--GWGKNKFGQLGLNDTKDRWFPALLKS-LRSQRV 244
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+ +S D A++ VF +G YGQ+
Sbjct: 245 IFVSCGEDHTAALTKLRGVFTFGAGGYGQL 274
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G D + + ++ L
Sbjct: 10 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-----DAEDRPSPTQLSAL 64
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 65 DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 123
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAE 182
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R + P + ST K+ + G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKMSMVACGW 233
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 27/330 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 68 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 115
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 116 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 169
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG ++ P V GE++
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKMSM 228
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ +++ P L S I ++ G
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRH 287
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G +Y WG+ GQ + + + + Q +F KV + G
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHTL 341
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG+G D+ FP
Sbjct: 342 AVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 73
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 132
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEH 183
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +A G T T+ D L+G G LG D + P + +
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGD----LYGWGWGRYGNLGLGDRTDRLVPERVTST------ 221
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G HTI ++ + +T+G + +GQ G G D + H +
Sbjct: 222 ----GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKLEA 272
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L I G HT+ LT GK+Y GW GQ G+G+ +Q +P VR + +++V
Sbjct: 273 LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVV 331
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASG 238
++S LAV+++ +VF WG GQ+ E + + P+++ VD ASG
Sbjct: 332 QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS-----VDGASG 384
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + T + F++G+N + Q G G G +L G+++++ CG HT+
Sbjct: 86 HVAIATADGEVFSWGHNGYSQLGNGTTN----HGLTPALVSTNLLGKRVIEVACGSHHTI 141
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+V++ G+ GQ G G NQ TP V ++ + +V ++ C +AV D G+
Sbjct: 142 ALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGE 201
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
++GWG + GQ+ + TP ++ +GVS ++ VA G + L DEG VY+WG
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVS-VIQVACGYAHTLALTDEGFVYAWGAN 260
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC--TFGAITNFGHLYMW 312
YG LG G K ++++ PTLI + K ++ + A T A T G + MW
Sbjct: 261 SYGQLGTGNKCNQAL-PTLINT---------DKERMAEVAACHTSHTSAAKTQSGQVLMW 310
Query: 313 GK 314
G+
Sbjct: 311 GQ 312
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 118/268 (44%), Gaps = 25/268 (9%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I +T N+ F G N G G G D Q I L G+KI+ G H
Sbjct: 35 IYVTVNDEVFALGTNCSGCLGLG-----DLQSTIEPRRIDALCGKKIVSLSYGTGPHVAI 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V+S G Q G G N+ TP LV + G+R+++++ +A++ G+V
Sbjct: 90 ATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S TPR +S C +V++A G + D G +Y WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNC 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHLYMW 312
G LG G P I + + S+I C + A+T+ G +Y W
Sbjct: 210 NGQLGLGNN-GNQQTPCRIAAL-----------QGVSVIQVACGYAHTLALTDEGFVYAW 257
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G N YGQLG G +Q P + ++
Sbjct: 258 GANSYGQLGTGNKCNQALPTLINTDKER 285
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 103/190 (54%), Gaps = 10/190 (5%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G HTI +T + F +G N+ GQ G G + + + L+ + ++
Sbjct: 129 RVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRV----SSCLQNKAVV 184
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
+ CGQ ++ + +SG++Y G+ +GQ GLG+ NQ+TPC + ++G +++++
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRI-AALQGVSVIQVACGYA 243
Query: 189 CVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML-- 245
LA++D+G V+ WG + YGQ+ + ++ + P +++ K R+ +VA+ ++ T
Sbjct: 244 HTLALTDEGFVYAWGANSYGQLGTGNKCNQALPTLINTDK--ERMAEVAACHTSHTSAAK 301
Query: 246 NDEGLVYSWG 255
G V WG
Sbjct: 302 TQSGQVLMWG 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 12/231 (5%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW + E +++ C + +++T + +V++ G G GLG L +
Sbjct: 5 GKWPVFALLPPEELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTIE 64
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDK-GDVFGWGNSEYGQISESEMQIS-TPRVLSQ 225
P + + G++IV LS +A++ G+VF WG++ Y Q+ TP ++S
Sbjct: 65 PRRIDA-LCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVST 123
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
R+++VA G L +G V++WGY GQ S + +PT P + Q
Sbjct: 124 NLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPT--PRRVSSCLQ-- 179
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
V ++ G A+ + G +Y WG N GQLGLG +Q P ++A
Sbjct: 180 -NKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAA 229
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +IACG ++ S + ++G G N + QLG + + P +
Sbjct: 183 VVNIACGQLCSMAVLDSGE----IYGWGYNCNGQLGLGNNGNQQTPCRIAAL-------- 230
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
+ +A G AHT+ +TD + +G NS+GQ G G
Sbjct: 231 --QGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTG 268
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 142/277 (51%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G ++ + ++ L
Sbjct: 11 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ-----LSAL 65
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 66 DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 124
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAE 183
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R + P + ST K+ + G
Sbjct: 184 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKMSMVACGW 234
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 235 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 271
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 148/331 (44%), Gaps = 29/331 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 69 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 116
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 117 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 170
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG ++ P V GE++
Sbjct: 171 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKMSM 229
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ +++ P L + + SGG
Sbjct: 230 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS--NSFISQISGGWR 287
Query: 242 CTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
TM L +G +Y WG+ GQ + + + + Q +F KV + G
Sbjct: 288 HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHT 341
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG+G D+ FP
Sbjct: 342 LAVTERNNVFAWGRGTNGQLGIGESVDRNFP 372
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 16 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 74
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 75 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 133
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 134 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEH 184
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 185 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 226
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +A G T T+ D L+G G LG D + P + +
Sbjct: 173 IRIKMVAAGAEHTAAVTEDGD----LYGWGWGRYGNLGLGDRTDRLVPERVTST------ 222
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G HTI ++ + +T+G + +GQ G G D + H +
Sbjct: 223 ----GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKLEA 273
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L I G HT+ LT GK+Y GW GQ G+G+ +Q +P VR + +++V
Sbjct: 274 LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVV 332
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASG 238
++S LAV+++ +VF WG GQ+ E + + P+++ VD ASG
Sbjct: 333 QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS-----VDGASG 385
>gi|452821071|gb|EME28106.1| ubiquitin-protein ligase E3 [Galdieria sulphuraria]
Length = 1119
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 154/331 (46%), Gaps = 45/331 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG+ TVV D +L + G G+ + + +P +RI P
Sbjct: 56 VQSIACGFSSTVVCFN--DNSLYVNG-GIYNQTATNRQEP-------------IRIQSPY 99
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
TQ +A G I+ T + T+G ++GQ GRG D+ G H + +L+
Sbjct: 100 TRERTQ--SIACGEDFVILATQSGTLVTWGGGAYGQLGRGAPM--DWSGP---HPVKNLQ 152
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++++ G H L LT++G+VYSCG G GQTGLG+ + PCLV + + +V +
Sbjct: 153 NKRVVKVAAGAFHWLALTDAGQVYSCGLGRHGQTGLGNCEDVYEPCLVEA-LWAQPVVNI 211
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ-------ISESEMQISTP-RV-LSQCKGVSRIVD 234
++ + + ++ G F +G+++YGQ + ESE + P R+ + Q R +
Sbjct: 212 AAGENHSIVITSTGFAFAFGSNKYGQLGISRQRLPESETRAELPLRIYMPQELASERFLA 271
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
A G L G V + G G+LG G + K + +F ++ +
Sbjct: 272 AACGTHHTLFLTSNGKVLACGSGQDGVLGIG-----NNKDEVCLVVIFSLFEYT----IV 322
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ AG A+++ G L++WG N+ GQLG
Sbjct: 323 QIAAGARHSAALSSQGELFLWGSNEQGQLGF 353
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 98/236 (41%), Gaps = 21/236 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIAD--LEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G N GQ G I E K + D + G+ + CG T+ +Y
Sbjct: 21 WGRNDSGQLGSTIDDENQQVNK--AQVLVDFGIAGDVVQSIACGFSSTVVCFNDNSLYVN 78
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G G QT N++ P ++ ER ++ D V+ + G + WG YGQ
Sbjct: 79 G-GIYNQTA----TNRQEPIRIQSPYTRERTQSIACGEDFVILATQSGTLVTWGGGAYGQ 133
Query: 210 ISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGP--KVS 266
+ + M S P + + R+V VA+G L D G VYS G G GQ
Sbjct: 134 LGRGAPMDWSGPHPVKNLQN-KRVVKVAAGAFHWLALTDAGQVYSCGLGRHGQTGLGNCE 192
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+P L+ + L+ Q V ++ AG IT+ G + +G N+YGQLG+
Sbjct: 193 DVYEPCLVEA-LWAQ-------PVVNIAAGENHSIVITSTGFAFAFGSNKYGQLGI 240
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 141/274 (51%), Gaps = 21/274 (7%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ ++ G +H++ + + ++G GQ G G ++ + ++ L+G
Sbjct: 2 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ-----LSALDGH 56
Query: 126 KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI +++
Sbjct: 57 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIA 115
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 116 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTA 174
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ ++G +Y WG YG LG G + R + P + ST K+ + G
Sbjct: 175 AVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKMSMVACGWRHT 225
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 259
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 25/329 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 57 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 104
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 105 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 158
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG ++ P V GE++
Sbjct: 159 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKMSM 217
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ ++VS G ++ +G S+YGQ+ +++ + S I ++ G
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHT 277
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G +Y WG+ GQ + + + + Q +F KV + G A
Sbjct: 278 MALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHTLA 331
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T +++ WG+ GQLG+G D+ FP
Sbjct: 332 VTERNNVFAWGRGTNGQLGIGESVDRNFP 360
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 62
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 121
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 122 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEH 172
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 214
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +A G T T+ D L+G G LG D + P + +
Sbjct: 161 IRIKMVAAGAEHTAAVTEDGD----LYGWGWGRYGNLGLGDRTDRLVPERVTST------ 210
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G HTI ++ + +T+G + +GQ G G D + H +
Sbjct: 211 ----GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKLEA 261
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L I G HT+ LT GK+Y GW GQ G+G+ +Q +P VR + +++V
Sbjct: 262 LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVV 320
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASG 238
++S LAV+++ +VF WG GQ+ E + + P+++ VD ASG
Sbjct: 321 QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS-----VDGASG 373
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 141/274 (51%), Gaps = 21/274 (7%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ ++ G +H++ + + ++G GQ G G ++ + ++ L+G
Sbjct: 2 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ-----LSALDGH 56
Query: 126 KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI +++
Sbjct: 57 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIA 115
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 116 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTA 174
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ ++G +Y WG YG LG G + R + P + ST K+ + G
Sbjct: 175 AVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKMSMVACGWRHT 225
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 259
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 148/331 (44%), Gaps = 29/331 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 57 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 104
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 105 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 158
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG ++ P V GE++
Sbjct: 159 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKMSM 217
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ +++ P L + + SGG
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS--NSFISQISGGFR 275
Query: 242 CTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
TM L +G +Y WG+ GQ + + + + Q +F KV + G
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHT 329
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG+G D+ FP
Sbjct: 330 LAVTERNNVFAWGRGTNGQLGIGESVDRNFP 360
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 62
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 121
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 122 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEH 172
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 214
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K++ +ACG+ T+ + S L+ G + QLG+ D LE + IP
Sbjct: 214 KMSMVACGWRHTISVSYSG----ALYTYGWSKYGQLGHGD-------LEDHL----IPHK 258
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--NI 119
++ S I ++ G HT+ +T + + +G N FGQ G G ++ C +
Sbjct: 259 LEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ-------CSPVQV 311
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ +K++ CG HTL +TE V++ G G +GQ G+G ++ P ++
Sbjct: 312 RFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 13/263 (4%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
+ IT N+ F G NS G G G D Q I L G++I+ G H +
Sbjct: 33 VLYITKNDEVFVMGTNSSGCLGTG-----DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T G+VYS G A Q G G N +PC V + ++ ++ + ++ G+
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGE 147
Query: 199 VFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
V+ WG + GQ+ S S PR ++ C ++ +A G + + D G VY+WGY
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYN 207
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ S +PT P + +VE ++ G A+T+ G +Y WG N Y
Sbjct: 208 GNGQLGLGSSGNQPT--PCRIAALQGI----RVEQVVCGYAHTLALTDEGVMYAWGANSY 261
Query: 318 GQLGLGTVEDQPFPLKVAVGGQK 340
GQLG G +Q +P++V V ++
Sbjct: 262 GQLGTGNKSNQSYPVQVIVDKER 284
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 32/299 (10%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA-HTI 81
KN ++F G NS LG D + P + M +I L+ G H +
Sbjct: 38 KNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDML----------SGKRIVSLSYGSGPHVV 87
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T + +++G+N++ Q G G Q C +L +K CG H++ LT
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTN----QALSPCQVSTNLINKKAHSVACGSHHSMVLT 143
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+VY+ G+ GQ G G NQ P V ++ + ++ ++ +AV D G+V+
Sbjct: 144 CDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYA 203
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG + GQ+ S TP ++ +G+ R+ V G + L DEG++Y+WG YG
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVEQVVCGYAHTLALTDEGVMYAWGANSYG 262
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYMWGK 314
LG G K ++S +I K ++ + A T A + G +YMWG+
Sbjct: 263 QLGTGNKSNQSYPVQVIVD----------KERIVEIAACHSSHTSAAKSQSGQVYMWGQ 311
>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
Length = 530
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T N F FG NS G G D Q + L G+KI D G H L
Sbjct: 35 IYTTQNNEVFVFGMNSSNCLGTG-----DNQSAIMPRRLDVLCGKKIKDLSYGSGPHILL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G+VYS WG +G + LG+ N + TP V E+ ++++K++ +A++ G
Sbjct: 90 CNEDGEVYS--WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 147
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S + S PR +S +V +A+G ++ + D G VY WGY
Sbjct: 148 EVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGY 207
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G ++ M L+ F Q P ++ ++ G A+++ G LY WG
Sbjct: 208 NGTGQLGLGNTGNQLMPCRLV----FAQ----PVCIIQ-VVLGYAHSLALSDQGVLYAWG 258
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N +GQLG+G +Q P+KV
Sbjct: 259 ANSHGQLGIGNKSNQTVPVKV 279
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 35/314 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + +N ++F G+NS + LG D + P L + +
Sbjct: 24 ACVFGSSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGK--------- 74
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G I++ + +G +++G+N + Q G G QG +L +K
Sbjct: 75 -KIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNG----NTIQGTTPVQVCMELLSKK 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H++ LT G+V+S G+ GQ G G NQ P V ++ + +V +++
Sbjct: 130 VIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSAC 242
+A++D G V+GWG + GQ+ +T L C+ V I+ V G +
Sbjct: 190 QTSSMAITDNGHVYGWGYNGTGQLGLG----NTGNQLMPCRLVFAQPVCIIQVVLGYAHS 245
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L+D+G++Y+WG +G LG G K ++++ P + + N + +
Sbjct: 246 LALSDQGVLYAWGANSHGQLGIGNKSNQTV-PVKVGT--------NERMVEVAACHSTNI 296
Query: 300 FGAITNFGHLYMWG 313
A + G +YMWG
Sbjct: 297 SAAKSQSGQVYMWG 310
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DCVLA 192
+ ++ T++ +V+ +G + LG +NQ R ++ G++I LS +L
Sbjct: 32 NEAIYTTQNNEVFV--FGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILL 89
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G+V+ WG++ Y Q+ + +Q +TP + +++ VA G L +G V
Sbjct: 90 CNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEV 149
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAITNFG 307
+SWGY G +G G ++S+ P + S+L +SKV S+ AG + AIT+ G
Sbjct: 150 FSWGYNNSGQVGSGTTANQSV-PRKVSSSL--------QSKVVVSIAAGQTSSMAITDNG 200
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
H+Y WG N GQLGLG +Q P ++
Sbjct: 201 HVYGWGYNGTGQLGLGNTGNQLMPCRLV 228
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 162 LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-P 220
L+ Q+ C+ + + G S+ + + + +VF +G + + + Q + P
Sbjct: 13 LSPQDLACIRQACVFG-------SSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMP 65
Query: 221 RVLSQCKGVSRIVDVASG-GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
R L G +I D++ G G + N++G VYSWG Y LG G + + P +
Sbjct: 66 RRLDVLCG-KKIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTI-QGTTPVQVCM 123
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
L + KV + G A+T+ G ++ WG N GQ+G GT +Q P KV+
Sbjct: 124 ELLSK-------KVIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVS 175
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T N F FG NS G G D Q + L G+KI D G H L
Sbjct: 105 IYTTQNNEVFVFGMNSSNCLGTG-----DNQSAIMPRRLDVLCGKKIKDLSYGSGPHILL 159
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G+VYS WG +G + LG+ N + TP V E+ ++++K++ +A++ G
Sbjct: 160 CNEDGEVYS--WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 217
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S + S PR +S +V +A+G ++ + D G VY WGY
Sbjct: 218 EVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGY 277
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G ++ M L+ F Q P ++ ++ G A+++ G LY WG
Sbjct: 278 NGTGQLGLGNTGNQLMPCRLV----FAQ----PVCIIQ-VVLGYAHSLALSDQGVLYAWG 328
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N +GQLG+G +Q P+KV
Sbjct: 329 ANSHGQLGIGNKSNQTVPVKV 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 143/314 (45%), Gaps = 35/314 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + +N ++F G+NS + LG D + P L + +
Sbjct: 94 ACVFGSSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGK--------- 144
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G I++ + +G +++G+N + Q G G QG +L +K
Sbjct: 145 -KIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNG----NTIQGTTPVQVCMELLSKK 199
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H++ LT G+V+S G+ GQ G G NQ P V ++ + +V +++
Sbjct: 200 VIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAG 259
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSAC 242
+A++D G V+GWG + GQ+ +T L C+ V I+ V G +
Sbjct: 260 QTSSMAITDNGHVYGWGYNGTGQLGLG----NTGNQLMPCRLVFAQPVCIIQVVLGYAHS 315
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L+D+G++Y+WG +G LG G K +++ +P + + + S
Sbjct: 316 LALSDQGVLYAWGANSHGQLGIGNKSNQT-----VPVKVGTNERMVEVAACHSTNIS--- 367
Query: 300 FGAITNFGHLYMWG 313
A + G +YMWG
Sbjct: 368 -AAKSQSGQVYMWG 380
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DCVLA 192
+ ++ T++ +V+ +G + LG +NQ R ++ G++I LS +L
Sbjct: 102 NEAIYTTQNNEVFV--FGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILL 159
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G+V+ WG++ Y Q+ + +Q +TP + +++ VA G L +G V
Sbjct: 160 CNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEV 219
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAITNFG 307
+SWGY G +G G ++S+ P + S+L +SKV S+ AG + AIT+ G
Sbjct: 220 FSWGYNNSGQVGSGTTANQSV-PRKVSSSL--------QSKVVVSIAAGQTSSMAITDNG 270
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
H+Y WG N GQLGLG +Q P ++
Sbjct: 271 HVYGWGYNGTGQLGLGNTGNQLMPCRLVFA 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 162 LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TP 220
L+ Q+ C+ + + G S+ + + + +VF +G + + + Q + P
Sbjct: 83 LSPQDLACIRQACVFG-------SSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMP 135
Query: 221 RVLSQCKGVSRIVDVASG-GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
R L G +I D++ G G + N++G VYSWG Y LG G + + P +
Sbjct: 136 RRLDVLCG-KKIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTI-QGTTPVQVCM 193
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
L + KV + G A+T+ G ++ WG N GQ+G GT +Q P KV+
Sbjct: 194 ELLSK-------KVIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSS 246
Query: 337 GGQ 339
Q
Sbjct: 247 SLQ 249
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 145/332 (43%), Gaps = 30/332 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I+ +ACG T + ++ L ++ G +LG+ GN +L +P P
Sbjct: 58 EISLVACGADHTTAYSATR---LTIYSWGWGDFGRLGH------GNSSDLF-----VPHP 103
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +I+ +A G +H + +T + +++G N GQ G G D H +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLG-----DTDDSLVPHKLLA 158
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG + G +HT +T+ GK+Y GWG G GLG ++ P V + E++
Sbjct: 159 FEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPA-VGDEKMC 217
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ +AVS G ++ +G S+YGQ+ + I V+ G
Sbjct: 218 MVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRH 277
Query: 242 CTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L + G +Y WG+ GQ V P LI ++ GQHQ +V + G
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLI--SIPGQHQ-----RVVQVSCGWRH 330
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T+ ++Y WG+ GQLG G D+ P
Sbjct: 331 TVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAP 362
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 135/313 (43%), Gaps = 29/313 (9%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P RI + +I +A G HT +
Sbjct: 30 GRGEDGQLGHGDAEDRHLP--------RIIGALN--DCEISLVACGADHTTAYSATRLTI 79
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + H I L+G +I CG H L +T G+VYS
Sbjct: 80 YSWGWGDFGRLGHG-----NSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSW 134
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG ++ P + EG + L++ + AV+D G ++GWG YG
Sbjct: 135 GRNQNGQLGLGDTDDSLVPHKLLA-FEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGN 193
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + G ++ VA G ++ G +Y++G YG LG G
Sbjct: 194 LGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYAD 253
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
L+P + +FN + + G A+T G LY WG N++GQ+G G V+
Sbjct: 254 H-----LLPHQVAALAEFN----ITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVD 304
Query: 327 DQPFPLKVAVGGQ 339
D P +++ GQ
Sbjct: 305 DHTSPQLISIPGQ 317
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G +HT+ + + +FG GQ G G D + + I L +I C
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHG-----DAEDRHLPRIIGALNDCEISLVAC 64
Query: 133 GQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G DHT + + +YS GWG G+ G G+ ++ P ++ ++G I +++ L
Sbjct: 65 GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA-LQGLEIRQIACGDSHCL 123
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV+ G+V+ WG ++ GQ+ + S P L +GVS + +A+G + D G
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAEHTAAVTDGGK 182
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y WG YG LG G + R M P +P+ K+ + G A++ G
Sbjct: 183 LYGWGWGRYGNLGLGDRGDR-MLPAEVPAV--------GDEKMCMVACGWRHTIAVSQSG 233
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
LY +G ++YGQLG G D P +VA
Sbjct: 234 KLYTYGWSKYGQLGHGDYADHLLPHQVAA 262
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 26/224 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +A G T T KL+G G LG D +G+ + L
Sbjct: 162 VSVKMLAAGAEHTAAVTDGG----KLYGWGWGRYGNLGLGD---RGDRM----------L 204
Query: 62 PVKHPST---QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P + P+ ++ +A G HTI ++ + +T+G + +GQ G G DY H
Sbjct: 205 PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHG-----DYADHLLPHQ 259
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+A L I G HT+ LTE+GK+Y GW GQ G G +++ +P L+ + +
Sbjct: 260 VAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQ 319
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPR 221
R+V++S +AV+DK +V+ WG GQ+ + + S P+
Sbjct: 320 RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPK 363
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G HT+ L V S G G DGQ G G ++ P ++ G + I ++
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRII-GALNDCEISLVA 63
Query: 185 SAVDCVLAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D A S + ++ WG ++G++ + + P + +G+ I +A G S C
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGL-EIRQIACGDSHC 122
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +G VYSWG G LG G +L+P L F S V+ L AG
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLG-----DTDDSLVPHKLLA---FEGVS-VKMLAAGAEH 173
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T+ G LY WG +YG LGLG D+ P +V AVG +K
Sbjct: 174 TAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEK 215
>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
Length = 5016
Score = 104 bits (259), Expect = 6e-20, Method: Composition-based stats.
Identities = 90/339 (26%), Positives = 144/339 (42%), Gaps = 41/339 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
++ +A G F+V A ++ + L GLNS+ +LG P ++V++F PL
Sbjct: 173 VSHLASGCHFSVAAV-AQPRGTTLLAWGLNSNGELGNGTMTSSPTP-QMVVTF---PLHF 227
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ I H++ G+ H VIT FT+G+N +GQ G G Q + +A L
Sbjct: 228 QREPLSIAHVSCGKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRT-QPEEVHFALATLS 286
Query: 124 ---------------GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-- 166
G + CG HTLF+T ++ G+ GQ GLGH Q
Sbjct: 287 SHRRALRVMHTVQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKG 346
Query: 167 ----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTP 220
TP V + + I+ L + + V GDV+ WG + G++ + ++ ++ P
Sbjct: 347 WRSCTPITVE-SLRDQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGVAVP 405
Query: 221 RVLSQCKGVS-RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
++ + S R V G +++D L+Y WG +G LG + RS L
Sbjct: 406 TLIPLLREASIRARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATP 465
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
LF + VE + G +T+ G Y WG N
Sbjct: 466 PLFAE-------GVEDVALGEFHTTCVTSAGKAYTWGLN 497
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 124/293 (42%), Gaps = 30/293 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSF----- 56
+ I ++CG V T +LF G N QLG D + P E+ +
Sbjct: 232 LSIAHVSCGKHHVAVITGQA----RLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSS 287
Query: 57 ----VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
+R+ V+H + H+A G AHT+ +T + G N GQ G G + + Y+G
Sbjct: 288 HRRALRVMHTVQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLG-HRLQQYKG 346
Query: 113 KWFCHNIA--DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPC 169
C I L + I+D GQ+H+ + +G VY+ G G DG+ G G L P
Sbjct: 347 WRSCTPITVESLRDQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGVAVPT 406
Query: 170 LVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-------ISTPR 221
L+ E R + + +SD ++ WG +++GQ+ + + ++TP
Sbjct: 407 LIPLLREASIRARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPP 466
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLI 274
+ ++ GV DVA G T + G Y+WG L V+ P I
Sbjct: 467 LFAE--GVE---DVALGEFHTTCVTSAGKAYTWGLNLRDNSALVASHHTPQAI 514
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 80/210 (38%), Gaps = 42/210 (20%)
Query: 150 GWG--ADGQTGLGHLNNQETPCLV-----RGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
WG ++G+ G G + + TP +V + E I +S V ++ + +F W
Sbjct: 197 AWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIAHVSCGKHHVAVITGQARLFTW 256
Query: 203 GNSEYGQISESEMQISTP------------------RVLSQCK-GVSRIVDVASGGSACT 243
G+++YGQ+ + T RV+ + G + + VA G +
Sbjct: 257 GSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVACGAAHTL 316
Query: 244 MLNDEGLVYSWGY---GLLGQGPKVS-----RSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+ + + GY G LG G ++ RS P + S + L A
Sbjct: 317 FVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESL--------RDQSILDLGA 368
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
G + + G +Y WG G+LG G +
Sbjct: 369 GQNHSACVLSNGDVYTWGCGDDGRLGDGKL 398
Score = 38.5 bits (88), Expect = 5.2, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQH-QFNPKSKVESLIAGPCTFGAITNFGH 308
+WG G LG G S S P ++ + F H Q P S + + G IT
Sbjct: 197 AWGLNSNGELGNGTMTS-SPTPQMVVT--FPLHFQREPLS-IAHVSCGKHHVAVITGQAR 252
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
L+ WG N+YGQLGLG + P +V
Sbjct: 253 LFTWGSNKYGQLGLGDFSSRTQPEEV 278
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 23/288 (7%)
Query: 55 SFVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
++ +P+PV P T++ A G AH++ +T +G N+ GQ G G
Sbjct: 82 NYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTP-- 139
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
++ G + G +H+L LT +G V++ G + GQ G G N+ TP V
Sbjct: 140 ---VDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSF 196
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRI 232
G I +++ LA++ G VF WG++ GQ+ + + STP V+ G + +
Sbjct: 197 P-SGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVVVGLPVG-TIV 254
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A GGS + G +WG G LG G ++R H P
Sbjct: 255 TAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDAS----------VHVRLPPGT 304
Query: 290 VESLIAGPCTFG-AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ +AG T A+T+ G + WG N +GQLG GT D+ P V++
Sbjct: 305 TVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSL 352
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 130/314 (41%), Gaps = 28/314 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+ G N+ QLG + P++ VR+P P T + +A G H++ +T
Sbjct: 116 TVLAWGRNAVGQLGDGTTINRSTPVD-----VRLP-----PGTTVTAVAAGFNHSLALTS 165
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G+NS GQ G G ++ G I G H+L LT +G
Sbjct: 166 AGTVFAWGDNSTGQLGDGTRTNRSTPVA-----VSFPSGTVITAVAAGGMHSLALTSAGT 220
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ G + GQ G G N+ TP +V G G + ++ LAV+ G+ WGN+
Sbjct: 221 VFAWGDNSTGQLGDGTRTNRSTPVVV-GLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNN 279
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ + V + + + VA G + L G V SWG +G LG G
Sbjct: 280 FVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDG 339
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
R+ G P + ++ AG A+T+ G + WG N GQLG
Sbjct: 340 TARDRNTP---------GSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGD 390
Query: 323 GTVEDQPFPLKVAV 336
GT + P+ ++
Sbjct: 391 GTTTVRRTPVAASL 404
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 99 QCGRGIVQEEDYQ--GKWFCHNI--ADLEGEKIMDAVCGQ----DHTLFLTESGKVYSCG 150
+ GRG+ + WFC + ++ + A+ H T
Sbjct: 7 RPGRGVGARRAARVIAGWFCLAVVVTAVQAGGVSSAIAQHTSVAQHRPSPTTVASDAVLA 66
Query: 151 WGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
WG + GQ G G NN T + G +G + + LAV+ G V WG + G
Sbjct: 67 WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126
Query: 209 QISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
Q+ + + + STP + G + + VA+G + L G V++WG G LG G +
Sbjct: 127 QLGDGTTINRSTPVDVRLPPGTT-VTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+RS P + F + + ++ AG A+T+ G ++ WG N GQLG GT
Sbjct: 186 TNRS-TPVAV--------SFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGT 236
Query: 325 VEDQPFPLKV 334
++ P+ V
Sbjct: 237 RTNRSTPVVV 246
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT +A G ++ T + +F G NS QLG + P V + LPV
Sbjct: 202 ITAVAAGGMHSLALTSAG----TVFAWGDNSTGQLGDGTRTNRSTP-------VVVGLPV 250
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
T + +A G +H++ +T A +GNN GQ G G D H +
Sbjct: 251 ---GTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDAS----VH-VRLPP 302
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIV 181
G + G H+L LT G V S WG++ GQ G G ++ TP V G I
Sbjct: 303 GTTVTAVAGGLTHSLALTSVGTVLS--WGSNNWGQLGDGTARDRNTPGSVS-LPPGVTIT 359
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
+++ LA++ G V WG + GQ+ + +
Sbjct: 360 AVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTV 395
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 199 VFGWGNSEYGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWG 255
V WG++ YGQ+ + + P + KG V A+GG A ++ + G V +WG
Sbjct: 64 VLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTE--VTAAAGGDAHSLAVTSAGTVLAWG 121
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
G LG G ++RS + + P + V ++ AG A+T+ G ++ W
Sbjct: 122 RNAVGQLGDGTTINRSTPVDV---------RLPPGTTVTAVAAGFNHSLALTSAGTVFAW 172
Query: 313 GKNQYGQLGLGTVEDQPFPLKVA 335
G N GQLG GT ++ P+ V+
Sbjct: 173 GDNSTGQLGDGTRTNRSTPVAVS 195
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 49/342 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI + G ++ T N +++ G N LG+ D L + +
Sbjct: 83 KIKKVEAGKSISMALTH----NGEVYSWGKNKGGILGHED--------RLSFNMTQPERI 130
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--------------RGIVQEE 108
K +IK ++ G+ H +T++ +T+GN FG+ G RG + +
Sbjct: 131 EKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHD 190
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-- 166
Q I L K CG T+ L+E GKVY+ G+ G LG++++Q
Sbjct: 191 YLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGS--LGYVSDQNSV 248
Query: 167 -TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLS 224
TP L++ + IVK+S+ A++ +G ++ WGN+ GQ+ S+ T P +++
Sbjct: 249 TTPQLIK---DLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVT 305
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQ 281
+ IVDV+ G + L +G +Y+WG+G LG G K S L+
Sbjct: 306 GFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNK-----------SDLYAP 354
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
K K+ + G IT LY +G+ GQLG+G
Sbjct: 355 RHVEFKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIG 396
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--NIADLEGEK 126
+IK + G++ ++ +T N +++G N GI+ ED I L G+K
Sbjct: 83 KIKKVEAGKSISMALTHNGEVYSWGKNK-----GGILGHEDRLSFNMTQPERIEKLLGKK 137
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGE----- 178
I CGQ H +TE G+VY+ WG LGH L ++ + RG + +
Sbjct: 138 IKQISCGQFHMAAVTEDGEVYT--WGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDS 195
Query: 179 ------------RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLS 224
+ +++ + + +S+ G V+ +G ++YG + + ++TP+++
Sbjct: 196 MLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLI- 254
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
K ++ IV +++G S C + +G +Y+WG GQ S+S+ T PS + G F
Sbjct: 255 --KDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGN-SQSLYQTK-PSIVTG---F 307
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP---------LKVA 335
++ + + G A+T G LY WG GQLG G D P +K+A
Sbjct: 308 GSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQKIIKIA 367
Query: 336 VGG 338
GG
Sbjct: 368 CGG 370
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+++G FGQ G + E +Y + I L +KI G+ ++ LT +G+VYS
Sbjct: 51 VYSWGYGGFGQLG--LQNENNY---YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYS 105
Query: 149 CGWGADGQTGLGHLN----NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
WG + LGH + N P + ++ G++I ++S + AV++ G+V+ WGN
Sbjct: 106 --WGKNKGGILGHEDRLSFNMTQPERIE-KLLGKKIKQISCGQFHMAAVTEDGEVYTWGN 162
Query: 205 SEYGQIS-----ESEMQISTPR-----------VLSQ---CKGVSRIVDVASGGSACTML 245
E+G++ + E +I R +L Q G + VA G +L
Sbjct: 163 KEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVL 222
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+++G VY++G YG LG + P LI + + + AG A
Sbjct: 223 SEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDL----------NDIVKISAGYSFCAA 272
Query: 303 ITNFGHLYMWGKNQYGQLG 321
IT G LY WG N+ GQLG
Sbjct: 273 ITKQGKLYTWGNNRNGQLG 291
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 35/256 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IK +ACG FTVV ++ K++ G N LGY + V P
Sbjct: 207 IKAKQVACGIQFTVVLSEDG----KVYTFGYNQYGSLGYVSDQNS----------VTTPQ 252
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K + +K ++ G + IT +T+GNN GQ G + YQ K +I
Sbjct: 253 LIKDLNDIVK-ISAGYSFCAAITKQGKLYTWGNNRNGQLGN---SQSLYQTK---PSIVT 305
Query: 122 LEGEK--IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
G + I+D CG + LT+ G++Y+ G+G DGQ G G+ ++ P V + ++
Sbjct: 306 GFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFK---QK 362
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-------SESEMQISTPRVLSQCKGVSRI 232
I+K++ +++ ++ +G GQ+ SE+ ++ STP ++ KG ++
Sbjct: 363 IIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIR-STPNLVQYFKG-KQV 420
Query: 233 VDVASGGSACTMLNDE 248
VDV GG + E
Sbjct: 421 VDVTCGGEHTIAITQE 436
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VYS G+G GQ GL + NN TP + + ++I K+ + +A++ G+V+ WG +
Sbjct: 51 VYSWGYGGFGQLGLQNENNYYTPTEIE-VLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109
Query: 206 EYGQISESE---MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+ G + + ++ P + + G +I ++ G + ++G VY+WG +G L
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLG-KKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKL 168
Query: 260 GQGPKVSRSMKPTLIPSTL---FGQHQFNPKSKVESL-------IAGPCTFGAI-TNFGH 308
G ++ + K + L + Q P+ K+ESL +A F + + G
Sbjct: 169 GHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ-KIESLGNIKAKQVACGIQFTVVLSEDGK 227
Query: 309 LYMWGKNQYGQLGLGTVEDQ 328
+Y +G NQYG LG V DQ
Sbjct: 228 VYTFGYNQYGSLGY--VSDQ 245
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 248 EGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
E +VYSWGYG GQ + PT I + K++ + AG A+T+
Sbjct: 48 ETIVYSWGYGGFGQLGLQNENNYYTPTEI--------EVLTDKKIKKVEAGKSISMALTH 99
Query: 306 FGHLYMWGKNQYGQLG 321
G +Y WGKN+ G LG
Sbjct: 100 NGEVYSWGKNKGGILG 115
>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
Length = 338
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 138/313 (44%), Gaps = 41/313 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G NS++QLG + P+PVK+ + I A G A V +D
Sbjct: 1 MWAWGANSNAQLGDGTKTDR-----------YSPIPVKNLDSVIGISAGGAASFAVRSDG 49
Query: 87 EGAFTFGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
A+ +G+N FGQ G G + QG H++ LE G H+L +
Sbjct: 50 T-AWAWGSNLFGQLGDGTTYDRLTPVQVQG---LHSVVALE--------AGSSHSLAVKA 97
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V++ GW GQ G G +++ TP V G + +V +++ LAV G V+ W
Sbjct: 98 DGSVWAWGWNTYGQLGDGTTDSRSTPVQVEGL---DSVVAVAAGSGHSLAVKADGSVWAW 154
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ- 261
G + GQ+ + ST V Q G+ +V V++G + + L +G V++WG GQ
Sbjct: 155 GANWSGQLGDGTYTESTVPV--QVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQL 212
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + + S P+ + T SL A+ N G ++ WG N GQLG
Sbjct: 213 GSETAASNSPSPVQVTGMASAAAISSGSDYSL--------ALKNDGTVWAWGYNSSGQLG 264
Query: 322 LGTVEDQPFPLKV 334
GT P++V
Sbjct: 265 NGTTTSSSAPVQV 277
>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Anolis carolinensis]
Length = 409
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 122/262 (46%), Gaps = 24/262 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K++ G H+ V+TD F G N GQ G G ED C + L G ++
Sbjct: 47 VKNITGGGGHSAVLTDTGELFLCGQNKNGQLGLG--HTEDVTHFKLC---SSLCGCSVIQ 101
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG--ERIVKLSSAV 187
CG D T+ L SG+V+SCG + GQ G+ + T V IE E++V +++ +
Sbjct: 102 VACGWDFTIILAGSGQVFSCGSNSFGQLGISQTSEGST---VSKRIESLQEKVVNVAAGL 158
Query: 188 DCVLAVSDKGDVFGWG---NSEYGQISESEMQISTPRVLSQCKGV----SRIVDVASGGS 240
LAV++ G VF WG +S+ + + EM S R CK +R+ VASG S
Sbjct: 159 RHALAVTENGSVFQWGIGMSSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSS 218
Query: 241 ACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
T L DEG +Y WG Q K +KP I + FG KV + G
Sbjct: 219 HATALTDEGELYVWGNNKHKQLVNKDDFVLKPQKIDAHYFG------GEKVRRVWNGWTH 272
Query: 300 FGAITNFGHLYMWGKNQYGQLG 321
A T G ++ WG+ YGQLG
Sbjct: 273 MVAQTEMGKVFTWGRADYGQLG 294
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 31/259 (11%)
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-----EKIMDAVCGQDHTLFLT 141
+ FT+G NS+GQ G G ED F + L+G E + + G H+ LT
Sbjct: 10 QALFTWGANSYGQLGLG--HREDV----FLPQV--LKGFLCNRETVKNITGGGGHSAVLT 61
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
++G+++ CG +GQ GLGH + T + + G +++++ D + ++ G VF
Sbjct: 62 DTGELFLCGQNKNGQLGLGHTED-VTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFS 120
Query: 202 WGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
G++ +GQ+ SE + R+ S ++V+VA+G + + G V+ WG G+
Sbjct: 121 CGSNSFGQLGISQTSEGSTVSKRIESL---QEKVVNVAAGLRHALAVTENGSVFQWGIGM 177
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFN----PKSKVESLIAGPCTFGAITNFGHLYMWGK 314
Q R+ + ++PS L + ++V+ + +G A+T+ G LY+WG
Sbjct: 178 SSQ---AKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGN 234
Query: 315 NQYGQLGLGTVEDQPFPLK 333
N++ QL V F LK
Sbjct: 235 NKHKQL----VNKDDFVLK 249
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 150/361 (41%), Gaps = 61/361 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +I G G + V T + + LF CG N + QLG L L
Sbjct: 47 VKNITGGGGHSAVLTDTGE----LFLCGQNKNGQLG----------LGHTEDVTHFKLCS 92
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +A G TI++ + F+ G+NSFGQ G E G I L+
Sbjct: 93 SLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQLGISQTSE----GSTVSKRIESLQ 148
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-------LGHLNNQETPCLVRGEIE 176
EK+++ G H L +TE+G V+ G G Q + PC V G +E
Sbjct: 149 -EKVVNVAAGLRHALAVTENGSVFQWGIGMSSQAKRACQGEMVPSFLRARQPCKVTG-LE 206
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-ISESEMQISTPRVLSQCKGVSRIVDV 235
R+ ++S A++D+G+++ WGN+++ Q +++ + + ++ + G ++ V
Sbjct: 207 DARVKIVASGSSHATALTDEGELYVWGNNKHKQLVNKDDFVLKPQKIDAHYFGGEKVRRV 266
Query: 236 ASGGSACTMLNDEGLVYSWG-------------YGLLGQGPKVS--RSMK-----PTLIP 275
+G + + G V++WG Y +GQ K S S+K P L+P
Sbjct: 267 WNGWTHMVAQTEMGKVFTWGRADYGQLGRSGLPYEQMGQDGKASDENSVKEPLHSPALVP 326
Query: 276 STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED--QPFPLK 333
+ L G Q S+ I G G + WG N++G G GT + P PL
Sbjct: 327 A-LTGASQIACGSEHNLAIVG----------GQCFSWGWNEHGMCGNGTEANVCAPQPLD 375
Query: 334 V 334
V
Sbjct: 376 V 376
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN S+GQ G G + EE C G+K+ D CG HT+FL + G VY+CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEF---FHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH ++ P V ++ + IV +S LA++DKG +F WG GQ+
Sbjct: 61 NDLGQ--LGHEKPRKKPEHVVA-LDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLG 117
Query: 212 ESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + + PR + +C +I VA G L+ G V+SWG +G LG G S
Sbjct: 118 LNNFEECVRVPRNI-KCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGS 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
P +I S Q P ++ L AG AIT G ++ WG+N++GQLGL
Sbjct: 177 SISTPQIIQSL-----QGIPFAQ---LSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTN 228
Query: 327 DQPFP 331
D+ FP
Sbjct: 229 DRWFP 233
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ PRKK P +V +I +
Sbjct: 35 KVCDVGCGLKHTVFLLDDG----TVYTCGCNDLGQLGHEKPRKK--PEHVVALDAQIIVA 88
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + G +HT+ + D F++G S GQ G +E + NI L
Sbjct: 89 V----------SGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPR----NIKCL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I CG H+ L++ G+V+S G GQ GLG H ++ TP +++ ++G
Sbjct: 135 SDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS-LQGIPFA 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+LS+ A++ G VFGWG +++GQ+ ++ L + R++ V+ G
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC--- 298
L EG V+++G G GQ S + H+ NP+ KV L+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTN-------------HEINPR-KVFELMGNIVTQI 299
Query: 299 ------TFGAITNFGHLYMWGKNQYGQLGLGTV--EDQPFPLK 333
T + G +Y +G GQLG + P P+K
Sbjct: 300 SCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVK 342
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G HT+ + D+ +T G N GQ G +++ ++ L+ + I+ G+
Sbjct: 42 GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKP-------EHVVALDAQIIVAVSGGES 94
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAVDCVLA 192
HTL L + G+++S G G+DGQ GL NN E V I+ +I +++ A
Sbjct: 95 HTLALNDKGQIFSWGLGSDGQLGL---NNFEECVRVPRNIKCLSDVQIAQVACGYRHSHA 151
Query: 193 VSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+S G VF WG +++GQ+ ISTP+++ +G+ +++GG+ + G
Sbjct: 152 LSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIP-FAQLSAGGAHSFAITLSGA 210
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V+ WG +G LG R P L+ S +V + G A+T G
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRWF-PALLKSL--------RSQRVIYVSCGEDHTAALTKEG 261
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ +G YGQLG + + P KV
Sbjct: 262 GVFTFGAGGYGQLGHNSTNHEINPRKV 288
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P ++ +R S ++ +++ G HT +T
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRWFPA--LLKSLR--------SQRVIYVSCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HTL F SGK
Sbjct: 261 GGVFTFGAGGYGQLGHNSTNHEINPRKVF-----ELMGNIVTQISCGRQHTLAFTPSSGK 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G N+++P V+G
Sbjct: 316 MYSFGLGGNGQLGTRSTCNRKSPAPVKG 343
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 121/248 (48%), Gaps = 26/248 (10%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C+ + + + D CG HT+F+ + G VY+CG
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLN---KTVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH +++ P V G ++ + IV +S L ++DKG V+ WG + GQ+
Sbjct: 61 NDLGQ--LGHEKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLG 117
Query: 212 E--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+E PR + V +IV VA G L+ V+SWG +G LG G +
Sbjct: 118 LPGTEEYTRVPRNIKSLSDV-QIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 267 RSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P LI S L FGQ + AG A+T G ++ WG+N++GQLGL
Sbjct: 177 KQTSPQLIKSLLGIPFGQ-----------IAAGGAHSFALTLSGAVFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 51/344 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ CG TV ++ CG N QLG+ RK+ P V
Sbjct: 36 VRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKR-------------PEQV 78
Query: 64 KHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
Q I ++ G AHT+ + D + +G + GQ G +E + NI L
Sbjct: 79 GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG+ L Q +P L++ + G
Sbjct: 135 SDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL-GIPFG 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ A++ G VFGWG +++GQ+ E P +L + +IV ++ G
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTG-------------HEINPR-KVFELMGNIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
A + + G +Y +G GQLG+G+ ++ PFP+K
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVK 342
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 24/271 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G HT+ + D+ +T G N GQ G ++ Q + L+ + I+
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRPEQ-------VGALDAQNIVA 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG+ HTL L + G+VY+ G+ ADGQ GL G P ++ + +IV+++
Sbjct: 89 VSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKS-LSDVQIVQVACGYY 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+S +VF WG +++GQ + + ++P+++ G+ +A+GG+ L
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIP-FGQIAAGGAHSFALT 206
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+ WG +G LG + R + P L+ S K+ + G A+
Sbjct: 207 LSGAVFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYISCGEDHTAAL 257
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T G ++ +G YGQLG + + P KV
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTGHEINPRKV 288
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S S +I +++ G HT +T
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVP-NLLKSL---------RSQKIVYISCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ +G+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTGHEINPRKVF-----ELMGNIVTQIACGRQHTSAFVPSTGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G+G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSPFPVKG 343
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 121/248 (48%), Gaps = 26/248 (10%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN SFGQ G G + EE C+ + + + D CG HT+F+ + G VY+CG
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLN---KTVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH +++ P V G ++ + IV +S L ++DKG V+ WG + GQ+
Sbjct: 61 NDLGQ--LGHEKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLG 117
Query: 212 E--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+E PR + V +IV VA G L+ V+SWG +G LG G +
Sbjct: 118 LPGTEEYTRVPRNIKSLSDV-QIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 267 RSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P LI S L FGQ + AG A+T G ++ WG+N++GQLGL
Sbjct: 177 KQTSPQLIKSLLGIPFGQ-----------IAAGGAHSFALTLSGAVFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 51/344 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ CG TV ++ CG N QLG+ RK+ P V
Sbjct: 36 VRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKR-------------PEQV 78
Query: 64 KHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
Q I ++ G AHT+ + D + +G + GQ G +E + NI L
Sbjct: 79 GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG+ L Q +P L++ + G
Sbjct: 135 SDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL-GIPFG 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ A++ G VFGWG +++GQ+ E P +L + +IV ++ G
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTG-------------HEINPR-KVFELMGNIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
A + + G +Y +G GQLG+G+ ++ PFP+K
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVK 342
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 24/271 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G HT+ + D+ +T G N GQ G ++ Q + L+ + I+
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRPEQ-------VGALDAQNIVA 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG+ HTL L + G+VY+ G+ ADGQ GL G P ++ + +IV+++
Sbjct: 89 VSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKS-LSDVQIVQVACGYY 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+S +VF WG +++GQ + + ++P+++ G+ +A+GG+ L
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIP-FGQIAAGGAHSFALT 206
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+ WG +G LG + R + P L+ S K+ + G A+
Sbjct: 207 LSGAVFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYISCGEDHTAAL 257
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T G ++ +G YGQLG + + P KV
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTGHEINPRKV 288
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S S +I +++ G HT +T
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVP-NLLKSL---------RSQKIVYISCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ +G+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTGHEINPRKVF-----ELMGNIVTQIACGRQHTSAFVPSTGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G+G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSPFPVKG 343
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 28/273 (10%)
Query: 69 QIKHLATGRA-------HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
Q+ LA GRA HT+++ N + +G+N GQ G G Q+ N+ D
Sbjct: 393 QVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLP---LPVNLTD 449
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
++ G HT L G V++ G GQ G G + ++ TP V G + G +
Sbjct: 450 -----VISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVG-LGG--VT 501
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ + LA+ G V+ WG + YGQ+ + R Q G+S IV +A+GGS
Sbjct: 502 AIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTA--VDRRQPVQASGLSNIVAIAAGGSH 559
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V+++GY GQ +R+ TL+P G S V SL AG
Sbjct: 560 SLALRSDGTVWAFGYNFDGQLGNGTRTW--TLVPVQAVG------LSSVVSLAAGSLYSL 611
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N GQLG+GT + PL+V
Sbjct: 612 ALRADGTVWAWGYNASGQLGVGTTQGSAQPLQV 644
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 139/323 (43%), Gaps = 64/323 (19%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R+P PV+ LA G+ H++ + + F +G N GQ G G +++ +
Sbjct: 49 RLP-PVR--------LALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQ---- 95
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+A L ++ G ++L L G V++ G A GQ G G L ++ P V
Sbjct: 96 -VAGL--TQVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSAL--- 149
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+V L+S VLA+ G V+ WG++ Q+ + + S+ V Q G+S +V V +
Sbjct: 150 SNVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSS--VPLQVPGLSGVVAVVA 207
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS------------------ 276
GGS+ L +G +++WG YG LG G V R + P + S
Sbjct: 208 GGSSSLALRADGTLWAWGDNRYGQLGDGTTV-RRITPVQVASLDSVVSVSVGAYHALALR 266
Query: 277 ----------TLFGQ-------HQFNPKS----KVESLIAGPCTFGAITNFGHLYMWGKN 315
+GQ + P S V +L+AG A+ G ++ WG N
Sbjct: 267 ADGTVWAWGHNAYGQLGDGTNTQRTQPVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDN 326
Query: 316 QYGQLGLGTVEDQPFPLKVAVGG 338
+Y QLG G + P PL+ + G
Sbjct: 327 RYRQLGTGNLTSSPLPLQAGMTG 349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 48/340 (14%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ + +A GY T A +S ++ G+N QLG + P+++V
Sbjct: 447 LTDVISVASGYRHTA-ALRSDGT---VWTWGMNRFGQLGEGTVTDRPTPVQVV------- 495
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHN 118
+ +ATG H++ + N + +G N +GQ G G + + + Q +
Sbjct: 496 -----GLGGVTAIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSN- 549
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG- 177
I+ G H+L L G V++ G+ DGQ G N T LV + G
Sbjct: 550 --------IVAIAAGGSHSLALRSDGTVWAFGYNFDGQLG----NGTRTWTLVPVQAVGL 597
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+V L++ LA+ G V+ WG + GQ+ Q S + Q G+S I +A+
Sbjct: 598 SSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSAQPL--QVPGLSGITSIAA 655
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G L +G V++WG+ G LG G R + P L+ S ++I
Sbjct: 656 GSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPR-LSPGLVAG----------MSNAVAII 704
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ G ++ WG N GQLG G + FP++V
Sbjct: 705 AGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQV 744
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 135/316 (42%), Gaps = 39/316 (12%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
N +L+ G N QLG + +PLPV T + +A+G HT
Sbjct: 416 ANGRLWAWGDNQQGQLGNGTQQDS-----------SLPLPVNL--TDVISVASGYRHTAA 462
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ + +T+G N FGQ G G V + + + L G + G +H+L L
Sbjct: 463 LRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQ-----VVGLGG--VTAIATGDNHSLALRS 515
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
+G V++ G+ GQ G G ++ P G IV +++ LA+ G V+ +
Sbjct: 516 NGTVWAWGFNRYGQLGDGTAVDRRQPVQASGL---SNIVAIAAGGSHSLALRSDGTVWAF 572
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLL 259
G + GQ+ + V Q G+S +V +A+G L +G V++WGY G L
Sbjct: 573 GYNFDGQLGNGTRTWTLVPV--QAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQL 630
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G S +P +P S + S+ AG A+ + G ++ WG N GQ
Sbjct: 631 GVG-TTQGSAQPLQVPGL----------SGITSIAAGSYHSLALRSDGWVWAWGFNFEGQ 679
Query: 320 LGLGTVEDQPFPLKVA 335
LG GT + P VA
Sbjct: 680 LGNGTSTPRLSPGLVA 695
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 21/274 (7%)
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
PV T ++ L G H++ + + + +G+N + Q G G + + A
Sbjct: 293 PVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSPLPLQ------AG 346
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ G + V G H++ L G +S G GQ G + P V G G R
Sbjct: 347 MTGGVTL--VAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALG-RAD 403
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + V+ + G ++ WG+++ GQ+ Q S+ L ++ ++ VASG
Sbjct: 404 ATSGQLHTVM-LGANGRLWAWGDNQQGQLGNGTQQDSS---LPLPVNLTDVISVASGYRH 459
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V++WG GQ + + + +PT + G V ++ G
Sbjct: 460 TAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVGLG--------GVTAIATGDNHSL 511
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ + G ++ WG N+YGQLG GT D+ P++ +
Sbjct: 512 ALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQAS 545
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 32/264 (12%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G H + + + + +G+N++GQ G G + + + V G
Sbjct: 258 GAYHALALRADGTVWAWGHNAYGQLGDGTNTQRT--------QPVSVSLTDVRTLVAGNY 309
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H+L + G V++ WG + LG N +P ++ + G V L + +A+
Sbjct: 310 HSLAVRTDGAVWA--WGDNRYRQLGTGNLTSSPLPLQAGMTGG--VTLVAGYRHSVALGA 365
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSR-IVDVASGGSACTMLNDEGLVYS 253
G + WG++ +GQ+ ++ + PR+ Q G++ D SG ML G +++
Sbjct: 366 DGTAWSWGDNVFGQLGDTTFE---PRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWA 422
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + S+ +P L + V S+ +G A+ + G ++
Sbjct: 423 WGDNQQGQLGNGTQQDSSLP---LPVNL---------TDVISVASGYRHTAALRSDGTVW 470
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKV 334
WG N++GQLG GTV D+P P++V
Sbjct: 471 TWGMNRFGQLGEGTVTDRPTPVQV 494
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 145/322 (45%), Gaps = 36/322 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ AC +G N ++F G N LG D + P RI +
Sbjct: 18 LRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPR-------RIDI 70
Query: 62 PVKHPSTQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G H ++ T + + +G+N + Q G G G
Sbjct: 71 LC---GKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTN----HGLTPALVST 123
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L G+++ + CG HT+ LT G+VY+ G+ GQ G G NQ TP V ++ + +
Sbjct: 124 NLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV 183
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV D G+ +GWG + GQ+ + TP ++ +G++ I+ VA G
Sbjct: 184 VNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGIN-IIQVACGY 242
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L DEG VYSWG YG LG G K ++++ PTLI + + VE
Sbjct: 243 AHTLALTDEGFVYSWGANSYGQLGTGNKSNQAV-PTLI--------NMDKERMVE---VA 290
Query: 297 PC----TFGAITNFGHLYMWGK 314
C T A T G + MWG+
Sbjct: 291 ACHTSHTSAAKTQSGQVLMWGQ 312
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I +T N+ F G N G G G D Q I L G+KI+ G H +
Sbjct: 35 IYVTVNDEVFALGTNCSGCLGLG-----DTQSTIEPRRIDILCGKKIISLSYGTGPHVVI 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+VY+ G Q G G N+ TP LV + G+R+ ++S +A++ G+V
Sbjct: 90 ATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
+ WG + GQ+ S S TPR +S C +V++A G + D G Y WGY
Sbjct: 150 YAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNC 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHLYMWGKN 315
GQ + + T P + N +I C + A+T+ G +Y WG N
Sbjct: 210 NGQLGLGNNGNQQT--PCRIAALQGIN-------IIQVACGYAHTLALTDEGFVYSWGAN 260
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
YGQLG G +Q P + + ++
Sbjct: 261 SYGQLGTGNKSNQAVPTLINMDKER 285
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW + E +++ C + +++T + +V++ G G GLG + Q T
Sbjct: 5 GKWPVFALLPPEELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGLG--DTQST 62
Query: 168 PCLVRGEIE-GERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVL 223
R +I G++I+ LS + V+A +D G+V+ WG++ Y Q+ TP ++
Sbjct: 63 IEPRRIDILCGKKIISLSYGTGPHVVIATAD-GEVYAWGHNGYSQLGNGTTNHGLTPALV 121
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
S R+ +V+ G L +G VY+WGY GQ S + +PT P + Q
Sbjct: 122 STNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPT--PRRVSSCLQ 179
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G Y WG N GQLGLG +Q P ++A
Sbjct: 180 ---NKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIA 228
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 17/213 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ + D CG HT+F+ + G VY+CG GQ LGH +++ P V G ++ + IV +
Sbjct: 17 NKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQ--LGHDKSRKKPDQV-GALDAQTIVAV 73
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S LA++DKG VF WG++ +GQI S +E I PR + + +IV VA G
Sbjct: 74 SCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI-QIVQVACGHHH 132
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+ E +YSWG YG LG G ++ + P I S L G + AG
Sbjct: 133 SLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKS-LAG-------IPFAHIAAGGG 184
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G ++ WG+N++GQLGL D+ P
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAP 217
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 43/340 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ CG TV ++ CG N QLG+ RKK + + +
Sbjct: 20 VRDVGCGSRHTVFVLDDG----TVYTCGCNDLGQLGHDKSRKKPDQVGAL---------- 65
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ I ++ G AHT+ + D F++G+ + GQ G + EDY NI L
Sbjct: 66 --DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVA--EDYIR--VPRNIKSLY 119
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+I+ CG H+L L++ +YS G GQ GLG +E+ + G +
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHI 179
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ A++ G +FGWG +++GQ+ E S P +L + +I+ + G
Sbjct: 180 AAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRS-QKIIHICCGEDHT 238
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE---SLIAGPC- 298
L EG V+++G G GQ S + H+ NP+ E S++
Sbjct: 239 AALTKEGGVFTFGAGGYGQLGHNSTN-------------HEVNPRKVFELMGSIVTQIAC 285
Query: 299 ----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG G+ ++ P V
Sbjct: 286 GRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 325
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G G + T S +FG G N QLG +D + P ++ +R
Sbjct: 174 IPFAHIAAGGGHSFALTMSG----AIFGWGRNKFGQLGLNDETDRSAPA--LLKSLR--- 224
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I H+ G HT +T G FTFG +GQ G E K F +
Sbjct: 225 -----SQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF-----E 274
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 275 LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 327
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +ACG+ ++ +K D ++ G N QLG KK + + S IP
Sbjct: 121 IQIVQVACGHHHSLALSKESD----IYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPF 176
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H+A G H+ +T + F +G N FGQ G + E D +
Sbjct: 177 ---------AHIAAGGGHSFALTMSGAIFGWGRNKFGQLG--LNDETDRSAPAL---LKS 222
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +KI+ CG+DHT LT+ G V++ G G GQ G N++ P V E+ G +
Sbjct: 223 LRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FELMGSIVT 281
Query: 182 KLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ LA V G ++ +G GQ+
Sbjct: 282 QIACGRQHTLAFVPSSGRIYSFGLGGNGQL 311
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 30/263 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I H+A H++ + DN A+ +G G G V+ + + H L+G++++
Sbjct: 246 ITHIACNENHSVAVADNGEAYVWGRGIDGSLG---VEGDKHVSPTQIHA---LDGKRVVH 299
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A CG TLF+ ESG+VY+CG GQ G+G P LV ERIV+++
Sbjct: 300 AACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTN--LPERIVRIACGNSH 357
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR--IVDVASGGSACTM 244
+A+S+ G ++ WG GQ+ E ++S RV S V R + D A GG+ +
Sbjct: 358 AVALSETGRLYAWGAHSSGQLGVGEPLEDRLSPVRVESN---VVRDDVADFACGGNHTII 414
Query: 245 LNDEGLVYSWGYGLLGQ---GPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIA-GPCT 299
L++ GL+Y++G G GQ GP +++ P +P NP+ + + I+ G
Sbjct: 415 LSNSGLLYAFGSGAQGQLGLGPLATKNQATPAALP---------NPEGRKYTAISCGQDI 465
Query: 300 FGAITNFGHLYMWGKNQYGQLGL 322
A+++ G +Y WG LGL
Sbjct: 466 SAAVSDRGKIYTWGSGASNALGL 488
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+A L G I C ++H++ + ++G+ Y G G DG G+ + +P + ++G
Sbjct: 237 RLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGV-EGDKHVSPTQIHA-LDG 294
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+R+V + L V + G+V+ GN+E+GQ+ S +S P +++ RIV +A
Sbjct: 295 KRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLP--ERIVRIA 352
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G S L++ G +Y+WG G LG G + + P + S + + V
Sbjct: 353 CGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDRLSPVRVESNVV-------RDDVADF 405
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
G ++N G LY +G GQLGLG ++Q P
Sbjct: 406 ACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATP 445
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 22/288 (7%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
++ +S +R P Q+ + G ++ D +T+G + G G G EED
Sbjct: 124 DIDLSQLRATAPETDQKLQVV-IDKGSTRVLIREDASDVYTWGEGTRGMLGHG---EEDP 179
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
+ + L G I G HT+ L SG+VYS G G G+ G G ++ TP
Sbjct: 180 EAS--PRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGRLGQGRERDRFTPLR 237
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
+ G + G I ++ + +AV+D G+ + WG G + + +P + G
Sbjct: 238 LAG-LRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGDKHVSPTQIHALDG-K 295
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
R+V A G + + + G VY+ G +G LG G + S +PTL+ N
Sbjct: 296 RVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMS-EPTLVT---------NLP 345
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKV 334
++ + G A++ G LY WG + GQLG+G +ED+ P++V
Sbjct: 346 ERIVRIACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDRLSPVRV 393
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG V +++ +L+ G +S QLG G PLE +S VR+
Sbjct: 347 RIVRIACGNSHAVALSETG----RLYAWGAHSSGQLGV------GEPLEDRLSPVRVESN 396
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + A G HTI+++++ + FG+ + GQ G G + ++ + +
Sbjct: 397 VVR--DDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATP---AALPNP 451
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG K CGQD + +++ GK+Y+ G GA GL + P L+ + K
Sbjct: 452 EGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGRTKYAPTLIESMAD-----K 506
Query: 183 LSSAVDCVLAVSDKGDVFGW-GNSEYGQISESEMQISTPRVLSQCK 227
V C + GW + E Q +++ +T R C+
Sbjct: 507 RCRTVACGFFHMAATIIHGWVPDDEATQCMACKLKFTTIRRRHHCR 552
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 91 TFGNNSFGQCGRGIVQE-----EDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
FG N GQ G G + +D F I +L E I+ CG HT+ LT SG
Sbjct: 10 AFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGA 69
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDC-VLAVSDKGDVFGWG 203
VYS GWG+ GQ G G L P + E ER+ V S C AV+ G ++ WG
Sbjct: 70 VYSWGWGSMGQLGHGDLKIINEPQKI-AFFEQERLEVDYISCGGCHSAAVTKDGTLYVWG 128
Query: 204 NSEYGQI--------SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
S +GQ+ + + + P + + + IV V+ GG+ L G VY WG
Sbjct: 129 ESHWGQLGLPKEYEAAHESLPVKCP--MPEGEAGETIVKVSCGGTHTAALTSFGRVYVWG 186
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS----KVESLIAGPCTFGAITNFGHLYM 311
G GQ S MK S + K+ KV + G A+T GH+Y+
Sbjct: 187 RGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYV 246
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
WGK YG LG+G DQ P ++
Sbjct: 247 WGKEDYGMLGVGQSSDQQIPKRL 269
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVITDN 86
FGC N D QLG R+ ++ V S P + + P I ++ G HT+ +T +
Sbjct: 11 FGC--NDDGQLGTGAKRRPTLAIDDV-SASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67
Query: 87 EGAFTFGNNSFGQCGRG---IVQEEDYQGKWFCHNIADLEGEKI-MDAV-CGQDHTLFLT 141
+++G S GQ G G I+ E IA E E++ +D + CG H+ +T
Sbjct: 68 GAVYSWGWGSMGQLGHGDLKIINEP--------QKIAFFEQERLEVDYISCGGCHSAAVT 119
Query: 142 ESGKVYSCGWGADGQTGLG---HLNNQETP--CLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+ G +Y G GQ GL ++ P C + GE IVK+S A++
Sbjct: 120 KDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF 179
Query: 197 GDVFGWGNSEYGQI-----------SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
G V+ WG + GQ+ +ES M S P +L G ++V VA G +
Sbjct: 180 GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNG-EKVVQVACGAFHSAAV 238
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
++G VY WG YG+LG G + IP L ++ V + G
Sbjct: 239 TEQGHVYVWGKEDYGMLGVGQSSDQQ-----IPKRL----EYFDDIPVLRVSCGGWHTVV 289
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G Y +G+ +YG+LGLG + + P
Sbjct: 290 VAKSGDCYAFGRGEYGRLGLGDTKSRTRP 318
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV-----QEEDYQ 111
V+ P+P I ++ G HT +T + +G GQ G G V + E
Sbjct: 150 VKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLM 209
Query: 112 GKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
G H + GEK++ CG H+ +TE G VY G G G+G ++Q+ P +
Sbjct: 210 GASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRL 269
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVS 230
+ ++++S + V+ GD + +G EYG++ + + T P ++ KG +
Sbjct: 270 E-YFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKT 328
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTL 278
++ A GGS + +G Y G +G LG MK +P+ L
Sbjct: 329 -VIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLA-----DMKALGVPTRL 373
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 10/213 (4%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++CG T T +++ G QLG K E +M R L
Sbjct: 163 IVKVSCGGTHTAALTSFG----RVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLK 218
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G H+ +T+ + +G +G G G Q D Q D+
Sbjct: 219 AFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVG--QSSDQQIPKRLEYFDDI- 275
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++ CG HT+ + +SG Y+ G G G+ GLG ++ P LV+ ++G+ +++
Sbjct: 276 --PVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKA-LKGKTVIQA 332
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ 216
+ L V+ G + G ++G++ ++M+
Sbjct: 333 ACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMK 365
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 3 KITDIACGYGFTVVATKSK------DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSF 56
K+ +ACG + T+ ++ + G G +SD Q+ P++ LE F
Sbjct: 224 KVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQI----PKR----LEY---F 272
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
IP + ++ G HT+V+ + + FG +G+ G G D + +
Sbjct: 273 DDIP---------VLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLG-----DTKSRTRP 318
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
H + L+G+ ++ A CG HTLF+T G Y G G+ GL + P
Sbjct: 319 HLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVP 370
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 36 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLIPKKLEALCGKKIKSLSYGS 90
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 91 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 150
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 151 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 210
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G V++ L P + H V ++ G A+T+ G L
Sbjct: 211 GWGYNGNGQLGLGNNVNQ-----LTPVRVAALHSV----CVNQIVCGYAHTLALTDEGLL 261
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 262 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 292
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 142/314 (45%), Gaps = 32/314 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 31 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGK--------- 81
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 82 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 136
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 137 VVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 196
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+AV D G+V+GWG + GQ+ + + TP ++ V + + G + L
Sbjct: 197 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC-VNQIVCGYAHTLAL 255
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTF 300
DEGL+Y+WG YG LG G K + + P H K +V + A T
Sbjct: 256 TDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAHTS 305
Query: 301 GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 306 AAKTQGGHVYMWGQ 319
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ AC +G N ++F G N LG D + P RI +
Sbjct: 18 LRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPR-------RIDV 70
Query: 62 PVKHPSTQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G H ++ T + F +G+N + Q G G G
Sbjct: 71 LC---GKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLGNGTTN----HGLTPALVST 123
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L G+++ + CG HT+ LT G+V++ G+ GQ G G NQ TP V ++ + +
Sbjct: 124 NLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVV 183
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V + C +AV D G+++GWG + GQ+ + TP ++ +GV+ +V VA G
Sbjct: 184 VNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVN-VVQVACGY 242
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ L DEG VY+WG YG LG G K ++++ PTLI + K ++ + A
Sbjct: 243 AHTLALTDEGFVYAWGANSYGQLGTGNKSNQAL-PTLINT---------DKERMVEVAAC 292
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T G + MWG+
Sbjct: 293 HTSHTSAAKTQSGQVLMWGQ 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 112/253 (44%), Gaps = 13/253 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +T N+ F G N G G G D Q I L G+KI+ G H +
Sbjct: 35 LYVTVNDEVFALGTNCSGCLGLG-----DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVI 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G Q G G N+ TP LV + G+R+ +++ +A++ G+V
Sbjct: 90 ATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S TPR +S C +V+V G + D G +Y WGY
Sbjct: 150 FAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNC 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + + T P + N V + G A+T+ G +Y WG N YG
Sbjct: 210 NGQLGLGNNGNQQT--PCRIAALQGVN----VVQVACGYAHTLALTDEGFVYAWGANSYG 263
Query: 319 QLGLGTVEDQPFP 331
QLG G +Q P
Sbjct: 264 QLGTGNKSNQALP 276
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW + E +++ C + L++T + +V++ G G GLG L +
Sbjct: 5 GKWPVFALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIE 64
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++IV LS + V+A +D G+VF WG++ Y Q+ TP ++S
Sbjct: 65 PRRI-DVLCGKKIVSLSYGTGPHVVIATAD-GEVFAWGHNGYSQLGNGTTNHGLTPALVS 122
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
R+ +VA G L +G V++WGY GQ S + +PT P + Q
Sbjct: 123 TNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPT--PRRVSSCLQ- 179
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
K V C+ + N G +Y WG N GQLGLG +Q P ++A
Sbjct: 180 -SKVVVNVGCGQLCSMAVLDN-GEIYGWGYNCNGQLGLGNNGNQQTPCRIA 228
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRS 268
DEG VY+WG YG LG G K ++S
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQS 298
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 13/260 (5%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHT 137
+ T N+ F G N G G G D Q + L G+KI G H
Sbjct: 57 EVLYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHI 111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
+ T G+V++ G A Q G G N+ PC + + +++++++ L ++ G
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY 231
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
GQ + +PT P + +V+ + G +T+ G +Y WG N
Sbjct: 232 NGNGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 317 YGQLGLGTVEDQPFPLKVAV 336
YGQLG G +Q +P V V
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV 305
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRLD-SLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ ++ACG ++V T + +F G N+ Q+G S V P+P
Sbjct: 153 QVIEVACGSYHSLVLTSDGE----VFAWGYNNSGQVGSG-------------STVNQPIP 195
Query: 63 VKHP----STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+ + + +A G+ + + D + +G N GQ G G + +
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCR----- 250
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+A L+G ++ CG HTL LT+ G+VY+ G + GQ G G+ +NQ P V E
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 147/333 (44%), Gaps = 29/333 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT + CG T T + L+++ G +LG+ GN S V P PV
Sbjct: 68 ITSVICGADHT---TAYSEDELQVYSWGWGDFGRLGH------GNS-----SDVFTPQPV 113
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 114 KALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQK-----IQAF 168
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG + G +HT +TE G +Y GWG G GLG N++ P V +EGE++V
Sbjct: 169 EGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVS-SVEGEKMVL 227
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ + VSD G+++ +G S+YGQ+ + + P L K S I ++ G
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-STISQISGGWRH 286
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L EG +Y WG+ GQ + + + Q F K+ + G
Sbjct: 287 TMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPV------QVHFPEDQKISQVACGWRHTL 340
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A++ +++ WG+ GQLG G + D+ P+ +
Sbjct: 341 ALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLI 373
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 31/313 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L G D QLG+ D + P V+S P I + G HT +++
Sbjct: 35 LCSWGRGEDGQLGHGDAEDRLVPT--VLSGFDAP--------GITSVICGADHTTAYSED 84
Query: 87 E-GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
E +++G FG+ G G + + + L+G KI CG H L +T +G+
Sbjct: 85 ELQVYSWGWGDFGRLGHG-----NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQ 139
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V S G +GQ GLG + P ++ EG + +++ + AV++ GD++GWG
Sbjct: 140 VQSWGRNQNGQLGLGTTEDSLLPQKIQA-FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWG 198
Query: 206 EYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
YG + + P +S +G ++V VA G ++D G +Y++G YG LG
Sbjct: 199 RYGNLGLGDRNDRLLPEKVSSVEG-EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH 257
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + L+P L + S + + G A+T+ G LY WG N++GQ+G
Sbjct: 258 G-----DFEDHLVPHKL----EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308
Query: 322 LGTVEDQPFPLKV 334
+G +D P++V
Sbjct: 309 VGNNDDHCSPVQV 321
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 28/289 (9%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
M V +P P T + ++ G +H++ + ++G GQ G G D + +
Sbjct: 1 MDSVMAAVPDSPPQTVVL-VSAGASHSVALLTGNVLCSWGRGEDGQLGHG-----DAEDR 54
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVR 172
++ + I +CG DHT +E +VYS GWG G+ G G+ ++ TP V+
Sbjct: 55 LVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK 114
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSR 231
++G +I +++ LAV+ G V WG ++ GQ+ + S P+ + +GV
Sbjct: 115 A-LQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVC- 172
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+ +A+G + ++G +Y WG YG LG G + R L+P +
Sbjct: 173 VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-----LLPEKV-------SSV 220
Query: 289 KVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ E ++ C + +++ G+LY +G ++YGQLG G ED P K+
Sbjct: 221 EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKL 269
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI IACG + T + ++ G N + QLG P + + +F +
Sbjct: 119 LKIKQIACGDSHCLAVTMAG----QVQSWGRNQNGQLGLGTTEDSLLP-QKIQAFEGVC- 172
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D + ++
Sbjct: 173 --------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRNDRLLPEKVSS 219
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EGEK++ CG HT+ +++SG +Y+ GW GQ G G + P + ++ I
Sbjct: 220 VEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTIS 278
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ +G ++GWG +++GQ+ V +I VA G
Sbjct: 279 QISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRH 338
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
L+++ V+SWG G LG G V R+ P LI
Sbjct: 339 TLALSEKKNVFSWGRGTSGQLGNGEIVDRNT-PVLI 373
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ D + ++ G H++ L + S G G DGQ G G ++ P ++ G +
Sbjct: 8 VPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSG-FDAP 66
Query: 179 RIVKLSSAVDCVLAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
I + D A S D+ V+ WG ++G++ + + TP+ + +G+ +I +A
Sbjct: 67 GITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIA 125
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G S C + G V SWG G LG G + + +L+P + Q V+ +
Sbjct: 126 CGDSHCLAVTMAGQVQSWGRNQNGQLGLG-----TTEDSLLPQKI----QAFEGVCVKMI 176
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
AG A+T G LY WG +YG LGLG D+ P KV +V G+K
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 224
>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
Length = 1128
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 92/338 (27%), Positives = 151/338 (44%), Gaps = 35/338 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I ++CG T +K +F G NSD QLG +DP K + L++S
Sbjct: 42 VLIQQVSCGSAHTSFISKQG----YVFSFGCNSDGQLGVNDPAIKFSSAPLLIS------ 91
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HNIA 120
+ T ++ G HT V+T + +G N GQCGR I +Y F H +
Sbjct: 92 DLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGRNLQGQCGRSI----NYNQFMFAPHKLH 147
Query: 121 DLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEG 177
K V CG HT ++ +G++Y+ G ++GQ G+G N + LV G
Sbjct: 148 TDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEGQLGIGVEFKNTVDRAALVTGI--S 205
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
E +++S L +++ G VFG G ++ +++ +Q S+ + Q + + + +
Sbjct: 206 EETIQVSCGYKHTLVLTNHGTVFGMGTNKRYELASGTLQKSSQPIRIQTIDMFAVEKIIA 265
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
GG + + + L+ WG G G V +S + + F SL
Sbjct: 266 GGFSVAITSQNELLV-WGSGDFG----VFQSPQKIFMEDVRFVD---------VSLSKSY 311
Query: 298 CTFGA-ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+FGA I + G +Y WG+NQ+GQLG G + P K+
Sbjct: 312 DSFGAAIDDQGFVYTWGQNQFGQLGQGDFRLRKLPTKI 349
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 29/259 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-ADLEGEKIMDAV-CGQDHTLFLTESGKVY 147
F++GN+ GQ G G QE + K F N+ L E ++ V CG HT F+++ G V+
Sbjct: 9 FSWGNDEMGQLGHG--QEGPDRKKIF--NLPKSLSFEVLIQQVSCGSAHTSFISKQGYVF 64
Query: 148 SCGWGADGQTGLGH--LNNQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGN 204
S G +DGQ G+ + P L+ + + V++S ++ GDV+ WG
Sbjct: 65 SFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGR 124
Query: 205 SEYGQISES---EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+ GQ S + P L V G +++ G +Y++G G
Sbjct: 125 NLQGQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEGQ 184
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHLYMWGKN 315
LG G + ++ + + + E I C + +TN G ++ G N
Sbjct: 185 LGIGVEFKNTVDRAALVTGI-----------SEETIQVSCGYKHTLVLTNHGTVFGMGTN 233
Query: 316 QYGQLGLGTVEDQPFPLKV 334
+ +L GT++ P+++
Sbjct: 234 KRYELASGTLQKSSQPIRI 252
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVS---RIVDVASGGSACTMLNDEGLVYSW 254
+ F WGN E GQ+ + ++ + K +S I V+ G + + ++ +G V+S+
Sbjct: 7 EFFSWGNDEMGQLGHGQEGPDRKKIFNLPKSLSFEVLIQQVSCGSAHTSFISKQGYVFSF 66
Query: 255 GYGLLGQ----GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
G GQ P + S P LI + Q NP + G +T+ G +Y
Sbjct: 67 GCNSDGQLGVNDPAIKFSSAPLLISDLV--SLQTNPV----QISCGGFHTAVLTSVGDVY 120
Query: 311 MWGKNQYGQLG 321
+WG+N GQ G
Sbjct: 121 IWGRNLQGQCG 131
>gi|405974201|gb|EKC38864.1| Protein RCC2 [Crassostrea gigas]
Length = 502
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 132/265 (49%), Gaps = 40/265 (15%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H+++IT + A TFG N GQ G+G + D + + L+G I+DA CG++HTL
Sbjct: 144 HSVIITADGKAMTFGRNDCGQLGQGDLNRRDLPTE-----VPLLQGLNIVDACCGKNHTL 198
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI--EGERIVKLSSAVDCVLAVSDK 196
FLT+ G VY+CG GQ GLGH Q + LV +I +G + K++ + + +
Sbjct: 199 FLTDKGHVYACGDNKMGQLGLGH---QSSTILVPTKISYKGPPVRKVAGGGEFSMMADIR 255
Query: 197 GDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDV------------------ 235
G+++ +G EYGQ+ ++ + +++ ++ +C+ R V+V
Sbjct: 256 GNLYSFGCPEYGQLGHNTDGKYFVTSNKMSFRCETRPRKVNVFIEKARDGHIVPVTDVEV 315
Query: 236 ---ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A G + +++ + V++WG+G G G K ++P L F+ ++ +
Sbjct: 316 RELACGANHTAIIDSKKRVFTWGFG--GYGRLGHAEPKDEMVPRHL---KFFDGPNRGAT 370
Query: 293 LIAGPCTFGAITN-FGHLYMWGKNQ 316
I TF TN +G LYMWG N+
Sbjct: 371 QIHAGSTFTLATNEYGALYMWGINK 395
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 82/228 (35%), Gaps = 37/228 (16%)
Query: 58 RIPLPVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
R LP + P Q I G+ HT+ +TD + G+N GQ G G
Sbjct: 172 RRDLPTEVPLLQGLNIVDACCGKNHTLFLTDKGHVYACGDNKMGQLGLG-----HQSSTI 226
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN---------- 164
+G + G + ++ G +YS G GQ LGH +
Sbjct: 227 LVPTKISYKGPPVRKVAGGGEFSMMADIRGNLYSFGCPEYGQ--LGHNTDGKYFVTSNKM 284
Query: 165 ----QETPCLVRGEIEGER-----------IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
+ P V IE R + +L+ + + K VF WG YG+
Sbjct: 285 SFRCETRPRKVNVFIEKARDGHIVPVTDVEVRELACGANHTAIIDSKKRVFTWGFGGYGR 344
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDE-GLVYSWG 255
+ +E + PR L G +R GS T+ +E G +Y WG
Sbjct: 345 LGHAEPKDEMVPRHLKFFDGPNRGATQIHAGSTFTLATNEYGALYMWG 392
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 181 VKLSSAVDCVLA-----VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVD 234
VK+ SA+ A ++ G +G ++ GQ+ + ++ + P + +G++ IVD
Sbjct: 131 VKIRSAISGCTACHSVIITADGKAMTFGRNDCGQLGQGDLNRRDLPTEVPLLQGLN-IVD 189
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
G + L D+G VY+ G G LG G + S + PT I ++ P KV
Sbjct: 190 ACCGKNHTLFLTDKGHVYACGDNKMGQLGLGHQSSTILVPTKI------SYKGPPVRKV- 242
Query: 292 SLIAGPCTFGAITNF-GHLYMWGKNQYGQLGLGT 324
AG F + + G+LY +G +YGQLG T
Sbjct: 243 ---AGGGEFSMMADIRGNLYSFGCPEYGQLGHNT 273
>gi|66827585|ref|XP_647147.1| hypothetical protein DDB_G0267586 [Dictyostelium discoideum AX4]
gi|60475311|gb|EAL73246.1| hypothetical protein DDB_G0267586 [Dictyostelium discoideum AX4]
Length = 462
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 163/363 (44%), Gaps = 69/363 (19%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKG------NPLELVMS 55
I I DI CG+ T++ DKN L+ CG S + K NP S
Sbjct: 86 IGIKDIECGHYHTMII----DKNDNLYQCGWTSFVGINNLTKNNKNLIPTIINPSSSSSS 141
Query: 56 FVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
F +IK+++ GR HT+++T + +++G S Q G G D Q +
Sbjct: 142 F------------KIKNVSGGRRHTLILTKDGKVYSYGIGSEYQLGHG-----DNQNRSE 184
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL--NNQETPCLVRG 173
I L I+ V G H++ L+ GK+YS G+ D QTG G L N ++P L+
Sbjct: 185 PTEIEQLSKYAIIKVVSGWGHSIALSNDGKLYSWGFSNDSQTGHGFLIDNPIKSPKLIAS 244
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-----ISESEMQISTPR------- 221
+ + + S D V+ ++DKG++ +G++E+GQ I E I+
Sbjct: 245 DFNFKNVF---SGSDFVITITDKGELITFGSNEFGQLGNGTIINQEFPINIINNHFGGGG 301
Query: 222 -VLSQCKGVSRIVDVASGG----------SACTMLNDEGLVYSWGY---GLLGQGPKVSR 267
++I++ A G S C +LND+G ++++G+ G LG G S
Sbjct: 302 GGGGANSKFNKIIESAGKGKFDKRISCGFSHCLILNDDGELFTFGWNGNGQLGIGRSNSN 361
Query: 268 SMK-----PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ P + S+LF K+E + AG A+T G LY+WG + +G+LG
Sbjct: 362 NNNTYESIPIKLDSSLFN------GEKIEMVSAGRNHSVALTESGRLYLWGNSNHGKLGN 415
Query: 323 GTV 325
GTV
Sbjct: 416 GTV 418
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGAD-GQTGLGHLNNQETPCLVRGEIEGE--RIVKL 183
I D CG HT+ + ++ +Y CGW + G L N P ++ +I +
Sbjct: 88 IKDIECGHYHTMIIDKNDNLYQCGWTSFVGINNLTKNNKNLIPTIINPSSSSSSFKIKNV 147
Query: 184 SSAVDCVLAVSDKGDVFGWG-NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S L ++ G V+ +G SEY S P + Q + I+ V SG
Sbjct: 148 SGGRRHTLILTKDGKVYSYGIGSEYQLGHGDNQNRSEPTEIEQLSKYA-IIKVVSGWGHS 206
Query: 243 TMLNDEGLVYSWGYG---LLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G +YSWG+ G G + +K P LI S FN K+ + +G
Sbjct: 207 IALSNDGKLYSWGFSNDSQTGHGFLIDNPIKSPKLIAS------DFNFKN----VFSGSD 256
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
IT+ G L +G N++GQLG GT+ +Q FP+ +
Sbjct: 257 FVITITDKGELITFGSNEFGQLGNGTIINQEFPINI 292
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CG+ ++ + LF G N + QLG N ++ IP+ +
Sbjct: 326 ISCGFSHCLILNDDGE----LFTFGWNGNGQLGIGRSNSNNNN-----TYESIPIKLDSS 376
Query: 67 ---STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW---FCHNIA 120
+I+ ++ GR H++ +T++ + +GN++ G+ G G V Y+ F ++
Sbjct: 377 LFNGEKIEMVSAGRNHSVALTESGRLYLWGNSNHGKLGNGTVSGNIYEPTELFDFDESVP 436
Query: 121 D---LEGEKIMDAVCGQDHTL 138
LE +K+++ G DHT+
Sbjct: 437 QSFPLEFQKVLNISTGFDHTI 457
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 39/261 (14%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +GN + G+ G G ++EE + + ++++ CG HTLFLT+ GK+Y+C
Sbjct: 4 YCWGNTAHGELGLGGIEEEQVMVP---RKMDWSQADEVVRVECGTSHTLFLTKEGKMYAC 60
Query: 150 GWGADGQTG--LGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G GQ G L L N+ L +E I +S LA+++ G VF WG++
Sbjct: 61 GNNDHGQLGHDLDTLPNKRPQRLT--SLENYIITCISCGTAHSLALTNWGQVFSWGSNAV 118
Query: 208 GQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ +E+ Q TPR++ + G +V +ASG C L + G +Y+WG YG LG
Sbjct: 119 GQLGHDAENGRQ-PTPRMI-KAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGI 176
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--------GAITNFGHLYMWG 313
G + PTLI +SL P F A++ G ++ WG
Sbjct: 177 GTTSEKVPMPTLI----------------QSLAGVPIAFIACGGNHSFAVSKSGAIFGWG 220
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
KN +GQLGL + + +P ++
Sbjct: 221 KNTFGQLGLNDLNSRCYPTQL 241
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 21/274 (7%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ ++ + G +HT+ +T + GNN GQ G + + + + + LE
Sbjct: 35 ADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQ----RLTSLENYI 90
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIVKLSS 185
I CG H+L LT G+V+S G A GQ G N Q TP +++ I + +V+++S
Sbjct: 91 ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKA-IGAKHVVQIAS 149
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+++ G+++ WG++ YGQ I + ++ P ++ GV I +A GG+
Sbjct: 150 GQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVP-IAFIACGGNHSF 208
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
++ G ++ WG +G LG SR L G V + G
Sbjct: 209 AVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG---------VRYISCGDDFS 259
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+TN G ++ G +GQLG G+ ++ P KV
Sbjct: 260 VFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV 293
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 48/342 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVR 58
++ + CG T+ TK K++ CG N QLG HD P K+ L + +++
Sbjct: 37 EVVRVECGTSHTLFLTKEG----KMYACGNNDHGQLG-HDLDTLPNKRPQRLTSLENYI- 90
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
I ++ G AH++ +T+ F++G+N+ GQ G +
Sbjct: 91 -----------ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRM---- 135
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEG 177
I + + ++ GQ H L LT +G++Y+ G + GQ G+G + + P L++ + G
Sbjct: 136 IKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQS-LAG 194
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-------QISTPRVLSQCKGVS 230
I ++ + AVS G +FGWG + +GQ+ +++ Q+ T R L GV
Sbjct: 195 VPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSL----GVR 250
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
I + G L +EG V++ G G GQ S S + ++P +F SK+
Sbjct: 251 YI---SCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNE--IVPRKVFELM----GSKI 301
Query: 291 ESLIAGP-CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G T + + G +Y +G GQLG+G V + P
Sbjct: 302 TQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTP 343
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I IACG + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 195 VPIAFIACGGNHSFAVSKSG----AIFGWGKNTFGQLGLNDLNSRCYPTQL--RTLR--- 245
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +++++ G ++ +T+ G FT G +FGQ G G E K F +
Sbjct: 246 -----SLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-----E 295
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G KI CG+ HTL F+ GK+Y G G GQ G+G + N TP +VRG
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVRG 348
>gi|328767985|gb|EGF78033.1| hypothetical protein BATDEDRAFT_91148 [Batrachochytrium
dendrobatidis JAM81]
Length = 497
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 21/259 (8%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH ++I D A+TFG N GQ G G + +++GE + A G+ HT
Sbjct: 83 AHAVIIDDQGAAYTFGRNQNGQLGDGTTTSRSDPFR------INIKGETFVKAAVGKAHT 136
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L +T SG+VY+ G Q G+ + +T V I+G+ V ++ +D LA+++ G
Sbjct: 137 LLVTASGRVYAAGENKVQQCGVKAGVDIKTFVQVTA-IKGQHAVDVACGLDFSLAITEDG 195
Query: 198 DVFGWGNSEYGQ---------ISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLN 246
+F WG+ +YGQ IS + I P++ + +IV +A G + L+
Sbjct: 196 TLFAWGSPQYGQLGDGKDHSYISGTSRMIYDPQMPKPITKLEDKKIVAIACGTNHSLALD 255
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
D+G VYSWG G G+ K +P+ + G N + V+ + G + AI
Sbjct: 256 DQGAVYSWGCGGYGRLGLPDSPPKDIFVPTEVPGFKDRN--NMVKKIACGTTSCMAIDGR 313
Query: 307 GHLYMWGK-NQYGQLGLGT 324
LY+WGK Q G G GT
Sbjct: 314 NALYLWGKWKQSGDGGQGT 332
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 135/316 (42%), Gaps = 55/316 (17%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVM---SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
G N + QLG + +P + + +FV+ A G+AHT+++T +
Sbjct: 98 GRNQNGQLGDGTTTSRSDPFRINIKGETFVK--------------AAVGKAHTLLVTASG 143
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+ G N QCG + K F + ++G+ +D CG D +L +TE G ++
Sbjct: 144 RVYAAGENKVQQCG----VKAGVDIKTFVQ-VTAIKGQHAVDVACGLDFSLAITEDGTLF 198
Query: 148 SCGWGADGQTGLGH-----------LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+ G GQ G G + + + P + ++E ++IV ++ + LA+ D+
Sbjct: 199 AWGSPQYGQLGDGKDHSYISGTSRMIYDPQMPKPIT-KLEDKKIVAIACGTNHSLALDDQ 257
Query: 197 GDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV-DVASGGSACTMLNDEGLVY 252
G V+ WG YG++ I P + K + +V +A G ++C ++ +Y
Sbjct: 258 GAVYSWGCGGYGRLGLPDSPPKDIFVPTEVPGFKDRNNMVKKIACGTTSCMAIDGRNALY 317
Query: 253 SWG----YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
WG G GQG P L P G + +V + AG T A+
Sbjct: 318 LWGKWKQSGDGGQG-------TPWLYPKHYPGLSGW----EVWEISAGGSTLFALAGEST 366
Query: 309 LYMWGKNQY-GQLGLG 323
+ WG+N Y G+LG G
Sbjct: 367 V-SWGQNAYHGELGHG 381
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY--------QGKWFCHNIADLEG 124
+A G ++ IT++ F +G+ +GQ G G ++ Y I LE
Sbjct: 181 VACGLDFSLAITEDGTLFAWGSPQYGQLGDG--KDHSYISGTSRMIYDPQMPKPITKLED 238
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER----- 179
+KI+ CG +H+L L + G VYS WG G LG ++ V E+ G +
Sbjct: 239 KKIVAIACGTNHSLALDDQGAVYS--WGCGGYGRLGLPDSPPKDIFVPTEVPGFKDRNNM 296
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+ K++ +A+ + ++ WG + P+ G + ++++GG
Sbjct: 297 VKKIACGTTSCMAIDGRNALYLWGKWKQSGDGGQGTPWLYPKHYPGLSGW-EVWEISAGG 355
Query: 240 SACTMLNDEGLVYSWG----YGLLGQGPKVSRS 268
S L E V SWG +G LG GP RS
Sbjct: 356 STLFALAGESTV-SWGQNAYHGELGHGPNAPRS 387
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 118/242 (48%), Gaps = 21/242 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H ++ TD +T+G+N++ Q G G G H +L K+++ CG H+L
Sbjct: 111 HVVIATDEGEVYTWGHNAYNQLGNGTTN----HGLVPTHISTNLGNRKVIEVACGSHHSL 166
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+V++ G+ GQ G G NQ P V G ++ + ++ C +AV + G+
Sbjct: 167 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGE 226
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
V+ WG + GQ+ S TP ++ +G+ R+ + G + +L DEG +Y+WG
Sbjct: 227 VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGI-RVHKIVCGYAHTLVLTDEGHLYAWGAN 285
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYMW 312
YG LG G K ++S PT + K +V + A T A T GH+YMW
Sbjct: 286 SYGQLGTGNKSNQSY-PTPVSV---------EKDRVIEIAACHSAHTSAAKTQSGHIYMW 335
Query: 313 GK 314
G+
Sbjct: 336 GQ 337
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-------- 135
T+N+ F G N G G G + + +E ++ D +CG+
Sbjct: 63 TENDEVFVLGTNCSGCLGTGDI-------------LHSIEPRRV-DHLCGKKIACLSYGS 108
Query: 136 --HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + T+ G+VY+ G A Q G G N+ P + + ++++++ L +
Sbjct: 109 GPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVL 168
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLV 251
+ G+VF WG + GQ+ S S PR ++ C ++I + G C+M + + G V
Sbjct: 169 TSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQ-NKIATTIACGQMCSMAVVESGEV 227
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
Y WGY GQ S +PT P + +V ++ G +T+ GHLY
Sbjct: 228 YVWGYNGNGQLGLGSSGNQPT--PCRIAALQGI----RVHKIVCGYAHTLVLTDEGHLYA 281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVAV 336
WG N YGQLG G +Q +P V+V
Sbjct: 282 WGANSYGQLGTGNKSNQSYPTPVSV 306
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 147/333 (44%), Gaps = 33/333 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S+ ++++ G +LG+ GN +L F +P+
Sbjct: 68 QIVSVTCGADHTVAYSESR---MEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 115
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 116 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 169
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG N++ P V GE++
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVT-SAGGEKMSM 228
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ ++VS G ++ +G S+YGQ+ +++ + G S I ++ G
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHT 288
Query: 243 TMLNDEGLVYSWGYGLLGQ---GPKVSR-SMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L +G +Y WG+ GQ G + + S IP KV + G
Sbjct: 289 MALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPD----------DQKVVQVSCGWR 338
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG+G D+ FP
Sbjct: 339 HTLAVTERNNVFAWGRGTNGQLGIGESLDRNFP 371
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G D + + ++ L
Sbjct: 10 VTPPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-----DAEDRLSPTQLSAL 64
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ +I+ CG DHT+ +ES +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 65 DDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 123
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAE 182
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R L+P + K+ + G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-----LVPERVTSA----GGEKMSMVACGW 233
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKL 270
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + +P +L QI + G HT+ +++
Sbjct: 40 GRGEDGQLGHGDAEDRLSPTQLSAL----------DDHQIVSVTCGADHTVAYSESRMEV 89
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L G +I CG H L +T G+V S
Sbjct: 90 YSWGWGDFGRLGHG-----NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSW 144
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ EG RI +++ + AV++ GD++GWG YG
Sbjct: 145 GRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 210 IS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
+ + ++ RV S G ++ VA G ++ G +Y++G YG LG G
Sbjct: 204 LGLGDRNDRLVPERVTS--AGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG-- 259
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
++ L+P L + S + + G A+T+ G LY WG N++GQ+G+G
Sbjct: 260 ---DLEDHLVPHKL----EALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 325 VEDQPFPLKVAV 336
DQ P++V +
Sbjct: 313 NLDQCSPVQVRI 324
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G ++ +P + ++ +IV ++
Sbjct: 15 RRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDDHQIVSVT 73
Query: 185 SAVDCVLAVSD-KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S+ + +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 74 CGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 132
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEH 183
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIP 60
K++ +ACG+ T+ + S L+ G + QLG+ D P LE + + V
Sbjct: 225 KMSMVACGWRHTISVSYSG----ALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSV--- 277
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--N 118
I ++ G HT+ +T + + +G N FGQ G G ++ C
Sbjct: 278 ---------ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ-------CSPVQ 321
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ + +K++ CG HTL +TE V++ G G +GQ G+G ++ P ++
Sbjct: 322 VRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKII 374
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 149/315 (47%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L F+
Sbjct: 24 ACVFGSSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIVPKKL--DFLN--------G 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G H ++ T++ F +G+N + Q G G QG A++ +K
Sbjct: 74 RKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTN----QGVAPVLVSANMLNKK 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ LT+SG+VY+ G+ GQ G G NQ TP V ++ + V +
Sbjct: 130 VVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LAV D G+V+GWG + GQ + + Q+ TP L +G+ ++ + G + C
Sbjct: 190 QTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRLVALQGLC-VLQIVCGYAHCLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L+DEG++Y+WG YG LG G K S + P I S K ++ + A T
Sbjct: 248 LSDEGVLYAWGSNTYGQLGTGNK-SNQLSPVQIMS---------EKERIVEVAACHSTHT 297
Query: 301 -GAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 298 SAAKTQSGQVYMWGQ 312
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 19/259 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +T ++ F G N G G D Q + L G KI+ G H L
Sbjct: 35 VYVTHDDEVFVLGLNCSNCLGTG-----DSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLM 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
TE G++++ G Q G G N P LV + +++V+++ +A++D G+V
Sbjct: 90 ATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
+ WG + GQ+ S S TPR +S C V + G ++ + D G VY WGY
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ L P L V ++ G A+++ G LY WG N
Sbjct: 210 NGQLGLGNNGNQ-----LTPCRLVALQGLC----VLQIVCGYAHCLALSDEGVLYAWGSN 260
Query: 316 QYGQLGLGTVEDQPFPLKV 334
YGQLG G +Q P+++
Sbjct: 261 TYGQLGTGNKSNQLSPVQI 279
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 231 RIVDVASG-GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+IV ++ G G M ++G +++WG Y LG G ++ + P L+ + + +
Sbjct: 75 KIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGT-TNQGVAPVLVSANMLNK----- 128
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
KV + G A+T+ G +Y WG N GQ+G G+ +QP P +V+
Sbjct: 129 --KVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVS 175
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G D + + ++ L
Sbjct: 10 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-----DAEDRPSPTQLSAL 64
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 65 DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 123
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ I VA+G
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIP-IKMVAAGAE 182
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R + P + ST K+ + G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKMSMVACGW 233
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 27/330 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 68 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 115
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 116 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 169
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG I G +HT +TE G +Y GWG G GLG ++ P V GE++
Sbjct: 170 EGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKMSM 228
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ +++ P L S I ++ G
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRH 287
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G +Y WG+ GQ + + + + Q +F KV + G
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHTL 341
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG+G D+ FP
Sbjct: 342 AVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 73
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 132
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q ++ + AG
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIPIKMVAAGAEH 183
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 26/238 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I +A G T T+ D L+G G LG D + P + +
Sbjct: 172 IPIKMVAAGAEHTAAVTEDGD----LYGWGWGRYGNLGLGDRTDRLVPERVTST------ 221
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G HTI ++ + +T+G + +GQ G G D + H +
Sbjct: 222 ----GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKLEA 272
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L I G HT+ LT GK+Y GW GQ G+G+ +Q +P VR + +++V
Sbjct: 273 LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVV 331
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASG 238
++S LAV+++ +VF WG GQ+ E + + P+++ VD ASG
Sbjct: 332 QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS-----VDGASG 384
>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
Length = 388
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 41/317 (12%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ ++ G NS++QLG + P+PVK+ + I A G A V
Sbjct: 47 KDGTVWAWGANSNAQLGDGTKTDR-----------YSPIPVKNLDSVIGISAGGAASFAV 95
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
+D A+ +G+N FGQ G G + QG H++ LE G H+L
Sbjct: 96 RSDGT-AWAWGSNLFGQLGDGTTYDRLTPVQVQG---LHSVVALE--------AGSSHSL 143
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+ G V++ GW GQ G G +++ TP V+ + +V +++ LAV G
Sbjct: 144 AVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQAL---DSVVAVAAGSGHSLAVKADGS 200
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
V+ WG + GQ+ + ST V Q G+ +V V++G + + L +G V++WG
Sbjct: 201 VWAWGANWSGQLGDGTYTESTVPV--QVTGLGSVVSVSAGNTFSSALKSDGTVWAWGAND 258
Query: 259 LGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ G + + S P+ + T SL A+ N G ++ WG N
Sbjct: 259 SGQLGSETAASNSPSPVQVTGMASAAAISSGSDYSL--------ALKNDGTVWAWGYNSS 310
Query: 318 GQLGLGTVEDQPFPLKV 334
GQLG GT P++V
Sbjct: 311 GQLGNGTTTSSSAPVQV 327
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 156/349 (44%), Gaps = 43/349 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I D+ACG GFT+ T+ +++ G+ QLG ++ +E + IP
Sbjct: 75 IRDVACGQGFTLFVTQQG----QVYSSGVGRYGQLGLGSLKE----VEGITLIDSIP--- 123
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ A G H++ +T+ ++ G G+ G G + + ++A E
Sbjct: 124 ----EKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRR-METPQLVESLAREE 178
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--------------HLNNQETPC 169
EKI+ G ++ L+ESGKVYS G DG G G H N + +P
Sbjct: 179 -EKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPR 237
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKG 228
L+R +E E++ +S A++ +G FGWG Y + ++E+ P+ L G
Sbjct: 238 LIRA-LEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG 296
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+ + SGG+ L G V++WG +G LG G + + +P ++ L
Sbjct: 297 PWK--QIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQ-----Q 349
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K ++ + AG A+ + G++Y WG+ G LG G ED+ P+ +
Sbjct: 350 AKEPIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAI 398
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 18/180 (10%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+A L+ + I D CGQ TLF+T+ G+VYS G G GQ GLG L E L+ + E
Sbjct: 67 VASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLI--DSIPE 124
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVL-SQCKGVSRIVDV 235
+++ ++ L V+++G ++ G + G++ + ++ TP+++ S + +I+ V
Sbjct: 125 KVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKV 184
Query: 236 ASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A+G L++ G VYS+G G LG G +P +F F+ +E+
Sbjct: 185 AAGHGFSIALSESGKVYSFGSANDGHLGHGE----------VPGGIFLWEPFHSHRNMET 234
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 27/200 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVR 58
++ I+CG G +K+ +GCG +D+++ + P+ +
Sbjct: 246 QMEYISCGSGHAFAI--NKEGVAFGWGCGRYHCFATDNEVNWEQPQ----------ALFH 293
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P P K + +G AHT+ +T + +G N FG G G + + +
Sbjct: 294 LPGP-------WKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPR-IVEK 345
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ E I G ++ + G VYS G G G G G ++ P ++ E +GE
Sbjct: 346 LLQQAKEPIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNE-QGE 404
Query: 179 --RIVKLSSAVDCVLAVSDK 196
++ ++ + + +AV D+
Sbjct: 405 PLQVDRIYAGFNYAIAVKDE 424
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 119/245 (48%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN S+GQ G G + EE C G+++ D CG+ HT FL E G VY+CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEF---FHGKRVRDVGCGRRHTAFLLEDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH +++ P V ++ + IV LS LA++DKG VF WG GQ+
Sbjct: 61 NDLGQ--LGHEKSRKKPEQVVA-LDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLG 117
Query: 212 ESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + I PR + V ++ VA G L+ G ++SWG YG LG G
Sbjct: 118 LNNFEECIRVPRNIKSLSDV-QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQ 176
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
P + S Q P +++ AG A+T G ++ WG+N++GQLGL
Sbjct: 177 SISVPQHLQSL-----QGIPFAQIA---AGGAHSFALTLSGAVFGWGRNKFGQLGLNDTN 228
Query: 327 DQPFP 331
D+ FP
Sbjct: 229 DRCFP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 30/275 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + GR HT + ++ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQIIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG+ HTL L + G+V+S G G+DGQ G LNN E V I+ V+++ V
Sbjct: 88 ALSCGESHTLALNDKGQVFSWGLGSDGQLG---LNNFEECIRVPRNIKSLSDVQVAQ-VA 143
Query: 189 C----VLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
C LA+S G +F WG + YGQ + + IS P+ L +G+ +A+GG+
Sbjct: 144 CGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIP-FAQIAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L G V+ WG +G LG R P L+ + +V + G
Sbjct: 203 FALTLSGAVFGWGRNKFGQLGLNDTNDRCF-PALLKAL--------RSQRVIYISCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV 288
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG T + ++ CG N QLG+ RKK P ++V +I
Sbjct: 35 RVRDVGCGRRHTAFLLEDG----TVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQI--- 85
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I L+ G +HT+ + D F++G S GQ G +E + NI L
Sbjct: 86 -------IVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
++ CG H+L L++ G ++S G GQ GLG + ++G +
Sbjct: 135 SDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A++ G VFGWG +++GQ+ ++ L + R++ ++ G
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
L EG V+++G G GQ
Sbjct: 255 AALTKEGGVFTFGAGGYGQ 273
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + T S +FG G N QLG +D + P ++ +R
Sbjct: 190 IPFAQIAAGGAHSFALTLSG----AVFGWGRNKFGQLGLNDTNDRCFPA--LLKALR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S ++ +++ G HT +T G FTFG +GQ G E K F +
Sbjct: 241 -----SQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL F SGK+ S G G +GQ G N+++P V+G
Sbjct: 291 LMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKG 343
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 156/349 (44%), Gaps = 43/349 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I D+ACG GFT+ T+ +++ G+ QLG ++ +E + IP
Sbjct: 34 IRDVACGQGFTLFVTQQG----QVYSSGVGRYGQLGLGSLKE----VEGITLIDSIP--- 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ A G H++ +T+ ++ G G+ G G + + ++A E
Sbjct: 83 ----EKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRR-METPQLVESLAREE 137
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--------------HLNNQETPC 169
EKI+ G ++ L+ESGKVYS G DG G G H N + +P
Sbjct: 138 -EKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPR 196
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKG 228
L+R +E E++ +S A++ +G FGWG Y + ++E+ P+ L G
Sbjct: 197 LIRA-LEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG 255
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+ + SGG+ L G V++WG +G LG G + + +P ++ L
Sbjct: 256 PWK--QIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQ-----Q 308
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K ++ + AG A+ + G++Y WG+ G LG G ED+ P+ +
Sbjct: 309 AKEPIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAI 357
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 18/180 (10%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+A L+ + I D CGQ TLF+T+ G+VYS G G GQ GLG L E L+ + E
Sbjct: 26 VASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLI--DSIPE 83
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVL-SQCKGVSRIVDV 235
+++ ++ L V+++G ++ G + G++ + ++ TP+++ S + +I+ V
Sbjct: 84 KVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKV 143
Query: 236 ASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A+G L++ G VYS+G G LG G +P +F F+ +E+
Sbjct: 144 AAGHGFSIALSESGKVYSFGSANDGHLGHGE----------VPGGIFLWEPFHSHRNMET 193
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
I+CG G +K+ +GCG +D+++ + P+ + +P P
Sbjct: 209 ISCGSGHAFAI--NKEGVAFGWGCGRYHCFATDNEVNWEQPQ----------ALFHLPGP 256
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K + +G AHT+ +T + +G N FG G G + + + +
Sbjct: 257 -------WKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPR-IVEKLLQQ 308
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE--RI 180
E I G ++ + G VYS G G G G G ++ P ++ E +GE ++
Sbjct: 309 AKEPIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNE-QGEPLQV 367
Query: 181 VKLSSAVDCVLAVSDK 196
++ + + +AV D+
Sbjct: 368 DRIYAGFNYAIAVKDE 383
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 23/267 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAV 131
++ G +H++V+T ++ + +G+N+ GQ G G +G +
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGR--------QTPTPAQGLPSVAQVS 126
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G+ H+L LT+ G+V++ G + GQ G G + TP V+G I +++ + L
Sbjct: 127 AGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSL 186
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGL 250
A++ G VF WG + GQ+ + S+ V Q +G+ + + VA+GG+ L +G
Sbjct: 187 ALTSDGRVFAWGKNSSGQLGNNSTVDSSIPV--QVQGLPANVTAVAAGGNHSLALTSDGR 244
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y+WG G LG G S S P L+ G SK ++ AG A+ G
Sbjct: 245 IYAWGLNSSGQLGDG-TTSNSSTPVLVAGLPAG-------SKPVAVSAGKDHSLALMQDG 296
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+Y WG N YGQLG GT P++V
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQV 323
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ--IKHLATGRAHTIVI 83
++F GLNS QLG + + R P+ V+ +T IK +A G H++ +
Sbjct: 140 RVFAWGLNSSGQLG-----------DGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLAL 188
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG--EKIMDAVCGQDHTLFLT 141
T + F +G NS GQ G + ++G + G +H+L LT
Sbjct: 189 TSDGRVFAWGKNSSGQLGNNSTVDSSIP--------VQVQGLPANVTAVAAGGNHSLALT 240
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G++Y+ G + GQ G G +N TP LV G G + V +S+ D LA+ G V+
Sbjct: 241 SDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYA 300
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GL 258
WG + YGQ+ S V Q G++ + V++GGS L +G VY+WG G
Sbjct: 301 WGGNSYGQLGNGTTTASEMPV--QVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQ 358
Query: 259 LGQGPKVSRS 268
LG G +R+
Sbjct: 359 LGDGTTSNRN 368
Score = 97.4 bits (241), Expect = 8e-18, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ ++ G +H++ +TD+ F +G NS GQ G G D + +A K++
Sbjct: 122 VAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTA--DSRTPVQVQGLATDSTIKVVA 179
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G +H+L LT G+V++ G + GQ G + P V+G + +++ +
Sbjct: 180 A--GGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGL--PANVTAVAAGGNH 235
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
LA++ G ++ WG + GQ+ + + STP +++ S+ V V++G L +
Sbjct: 236 SLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQD 295
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VY+WG YG LG G + M P + G + V ++ AG A+T+
Sbjct: 296 GTVYAWGGNSYGQLGNGTTTASEM-----PVQVTGL------ANVTAVSAGGSDSLALTS 344
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G++Y WG N GQLG GT ++ P++V
Sbjct: 345 DGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
A + GE + A G H+L LT V++ G +GQ G G ++TP +G
Sbjct: 67 AAVLGEAAVSA--GGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGL---PS 121
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG 238
+ ++S+ LA++D G VF WG + GQ+ + S TP + S I VA+G
Sbjct: 122 VAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAG 181
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G+ L +G V++WG G LG V S IP + G + V ++ A
Sbjct: 182 GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSS-----IPVQVQGL-----PANVTAVAA 231
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T+ G +Y WG N GQLG GT + P+ VA
Sbjct: 232 GGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVA 271
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P + ++ G +H++ + + ++G GQ G G D + + ++ L
Sbjct: 10 VTAPPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-----DAEDRPSPTQLSAL 64
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 65 DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 123
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAE 182
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R L+P + K+ + G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-----LVPERVTSA----GGEKMSMVACGW 233
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 146/329 (44%), Gaps = 25/329 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 68 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 115
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 116 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 169
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG N++ P V GE++
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVT-SAGGEKMSM 228
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ ++VS G ++ +G S+YGQ+ +++ + S I ++ G
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHT 288
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G +Y WG+ GQ + + + + Q +F KV + G A
Sbjct: 289 MALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHTLA 342
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T +++ WG+ GQLG+G D+ FP
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 17/215 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H++ L V S G G DGQ G G ++ +P + ++G +IV ++ D +
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVTCGADHTV 80
Query: 192 AVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A S G +V+ WG ++G++ + + TP + G+ RI +A G S C + EG
Sbjct: 81 AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCLAVTMEG 139
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V SWG G LG G + +L+P + Q +++ + AG A+T
Sbjct: 140 EVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEHTAAVTED 190
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 191 GDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K++ +ACG+ T+ + S L+ G + QLG+ D LE + IP
Sbjct: 225 KMSMVACGWRHTISVSYSG----ALYTYGWSKYGQLGHGD-------LEDHL----IPHK 269
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--NI 119
++ S I ++ G HT+ +T + + +G N FGQ G G ++ C +
Sbjct: 270 LEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ-------CSPVQV 322
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+ +K++ CG HTL +TE V++ G G +GQ G+G ++ P ++
Sbjct: 323 RFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIE 375
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLHDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDYKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ FP
Sbjct: 222 LGLNDENDRYFP 233
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + + +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYF-PNLLKSL--------RTQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLHDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIP 60
I+I +ACGY ++ +K+ + +F G N QLG D +K+ +P +L+ S + IP
Sbjct: 137 IQIVQVACGYYHSLALSKASE----VFCWGQNKYGQLGLGIDYKKQASP-QLIKSLLGIP 191
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+A G AH+ V+T + F +G N FGQ G D ++F + +
Sbjct: 192 F---------MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN-----DENDRYFPNLLK 237
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L +KI+ CG+DHT LT+ G V++ G G GQ G +++ P V E+ G +
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-ELMGSIV 296
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ A V G ++ +G GQ+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYFP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 42/265 (15%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +GN + G+ G G ++EE + + ++++ CG HTLFLT+ GK+Y+C
Sbjct: 4 YCWGNTAHGELGLGGIEEEQVMVP---RKMDWSQADEVVRVECGTSHTLFLTKEGKMYAC 60
Query: 150 GWGADGQTG--LGHLNNQETPCLVRGE----IEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G GQ G L L N+ P + R + +E I +S LA+++ G VF WG
Sbjct: 61 GNNDHGQLGHDLDTLPNKR-PRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 119
Query: 204 NSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
++ GQ+ +E+ Q TPR++ + G +V +ASG C L + G +Y+WG YG
Sbjct: 120 SNAVGQLGHDAENGRQ-PTPRMI-KAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYG 177
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--------GAITNFGHL 309
LG G + PTLI +SL P F A++ G +
Sbjct: 178 QLGIGTTSEKVPMPTLI----------------QSLAGVPIAFIACGGNHSFAVSKSGAI 221
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WGKN +GQLGL + + +P ++
Sbjct: 222 FGWGKNTFGQLGLNDLNSRCYPTQL 246
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW-FCHNIADLEGE 125
+ ++ + G +HT+ +T + GNN GQ G + + + + + LE
Sbjct: 35 ADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENY 94
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIVKLS 184
I CG H+L LT G+V+S G A GQ G N Q TP +++ I + +V+++
Sbjct: 95 IITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKA-IGAKHVVQIA 153
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S LA+++ G+++ WG++ YGQ I + ++ P ++ GV I +A GG+
Sbjct: 154 SGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVP-IAFIACGGNHS 212
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ G ++ WG +G LG SR L G V + G
Sbjct: 213 FAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG---------VRYISCGDDF 263
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+TN G ++ G +GQLG G+ ++ P KV
Sbjct: 264 SVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV 298
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 152/338 (44%), Gaps = 35/338 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ + CG T+ TK K++ CG N QLG HD N + F R+
Sbjct: 37 EVVRVECGTSHTLFLTKEG----KMYACGNNDHGQLG-HDLDTLPNKRPRMSRFKRL--- 88
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ I ++ G AH++ +T+ F++G+N+ GQ G + I +
Sbjct: 89 TSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRM----IKAI 144
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIV 181
+ ++ GQ H L LT +G++Y+ G + GQ G+G + + P L++ + G I
Sbjct: 145 GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQS-LAGVPIA 203
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-------QISTPRVLSQCKGVSRIVD 234
++ + AVS G +FGWG + +GQ+ +++ Q+ T R L GV I
Sbjct: 204 FIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSL----GVRYI-- 257
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
+ G L +EG V++ G G GQ S S + ++P +F SK+ +
Sbjct: 258 -SCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNE--IVPRKVFELM----GSKITQIA 310
Query: 295 AGP-CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G T + + G +Y +G GQLG+G V + P
Sbjct: 311 CGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTP 348
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I IACG + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 200 VPIAFIACGGNHSFAVSKSG----AIFGWGKNTFGQLGLNDLNSRCYPTQL--RTLR--- 250
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +++++ G ++ +T+ G FT G +FGQ G G E K F +
Sbjct: 251 -----SLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-----E 300
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G KI CG+ HTL F+ GK+Y G G GQ G+G + N TP +VRG
Sbjct: 301 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVRG 353
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ EG + WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +G+ F WG ++YGQ+ + + Q ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ G+ + G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLHDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDYKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ FP
Sbjct: 222 LGLNDENDRYFP 233
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + + +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYF-PNLLKSL--------RTQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLHDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIP 60
I+I +ACGY ++ +K+ + +F G N QLG D +K+ +P +L+ S + IP
Sbjct: 137 IQIVQVACGYYHSLALSKASE----VFCWGQNKYGQLGLGIDYKKQASP-QLIKSLLGIP 191
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+A G AH+ V+T + F +G N FGQ G D ++F + +
Sbjct: 192 F---------MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN-----DENDRYFPNLLK 237
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L +KI+ CG+DHT LT+ G V++ G G GQ G +++ P V E+ G +
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-ELMGSIV 296
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ A V G ++ +G GQ+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYFP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 146/336 (43%), Gaps = 35/336 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT + CG T T + L+++ G +LG+ GN S V P PV
Sbjct: 67 ITSVICGADHT---TAYSEDELQVYSWGWGDFGRLGH------GNS-----SDVFTPQPV 112
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 113 KALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK-----IQAF 167
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E + G +HT +TE G +Y GWG G GLG N++ P V +EGE++V
Sbjct: 168 ESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVS-SVEGEKMVL 226
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ + VSD G+++ +G S+YGQ+ + + P + K S I ++ G
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRH 285
Query: 242 CTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L EG +Y WG+ GQ G S GQ F K+ + G
Sbjct: 286 TMALTSEGKLYGWGWNKFGQVGVGNNDDHSSP---------GQVSFPEDQKISQVACGWR 336
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A++ +++ WG+ GQLG G + D+ P+ +
Sbjct: 337 HTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLI 372
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 142/314 (45%), Gaps = 31/314 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L G D QLG+ D + P V+S P I + G HT +++
Sbjct: 34 LCSWGRGEDGQLGHGDAEDRLVPT--VLSGFDAP--------AITSVICGADHTTAYSED 83
Query: 87 E-GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
E +++G FG+ G G + + + L+G KI CG H L +T +G+
Sbjct: 84 ELQVYSWGWGDFGRLGHG-----NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGE 138
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V S G +GQ GLG + P ++ E + +++ + AV++ GD++GWG
Sbjct: 139 VQSWGRNQNGQLGLGTTEDSLLPQKIQA-FESVCVKMIAAGAEHTAAVTEDGDLYGWGWG 197
Query: 206 EYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
YG + + P +S +G ++V VA G ++D G +Y++G YG LG
Sbjct: 198 RYGNLGLGDRNDRLLPEKVSSVEG-EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH 256
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + L+P + + S + + G A+T+ G LY WG N++GQ+G
Sbjct: 257 G-----DFEDHLVPHKV----EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
Query: 322 LGTVEDQPFPLKVA 335
+G +D P +V+
Sbjct: 308 VGNNDDHSSPGQVS 321
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 41/306 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI IACG + T + + + G N + QLG P + + +F
Sbjct: 118 LKIKQIACGDSHCLAVTMAGE----VQSWGRNQNGQLGLGTTEDSLLP-QKIQAF----- 167
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +K +A G HT +T++ + +G +G G G D + ++
Sbjct: 168 ----ESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRNDRLLPEKVSS 218
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EGEK++ CG HT+ +++SG +Y+ GW GQ G G + P V ++ I
Sbjct: 219 VEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTIS 277
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-------ESEMQISTPRVLSQCKGVSRIVD 234
++S +A++ +G ++GWG +++GQ+ S Q+S P +I
Sbjct: 278 QISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPE-------DQKISQ 330
Query: 235 VASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G L+++ V+SWG G LG G V R+ P LI + + K+E
Sbjct: 331 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNT-PVLIDAL---SSDGSACKKLE 386
Query: 292 SLIAGP 297
S A P
Sbjct: 387 SSTAAP 392
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G +H++ + ++G GQ G G D + + ++ +
Sbjct: 11 PPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHG-----DAEDRLVPTVLSGFDAP 65
Query: 126 KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
I +CG DHT +E +VYS GWG G+ G G+ ++ TP V+ ++G +I +++
Sbjct: 66 AITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA-LQGLKIKQIA 124
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ G+V WG ++ GQ+ + S P+ + + V + +A+G
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVC-VKMIAAGAEHTA 183
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ ++G +Y WG YG LG G + R L+P + + E ++ C +
Sbjct: 184 AVTEDGDLYGWGWGRYGNLGLGDRNDR-----LLPEKV-------SSVEGEKMVLVACGW 231
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G+LY +G ++YGQLG G ED P KV
Sbjct: 232 RHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKV 268
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H++ L + S G G DGQ G G ++ P ++ G + I + D
Sbjct: 20 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSG-FDAPAITSVICGADHTT 78
Query: 192 AVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A S D+ V+ WG ++G++ + + TP+ + +G+ +I +A G S C + G
Sbjct: 79 AYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLAVTMAG 137
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V SWG G LG G + + +L+P + Q V+ + AG A+T
Sbjct: 138 EVQSWGRNQNGQLGLG-----TTEDSLLPQKI----QAFESVCVKMIAAGAEHTAAVTED 188
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG +YG LGLG D+ P KV +V G+K
Sbjct: 189 GDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 223
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 19/268 (7%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ + G++H+ VI ++ +T+G GQ G +V E + + H + +E
Sbjct: 37 NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEP----HIVPKMENRGSS 92
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG++HT+ +T++G +Y+ G GQ G G L + +P L+ + ++ ++
Sbjct: 93 AVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEF 152
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR--IVDVASGGSACTMLN 246
+A+ +G ++ WG ++ GQ+ + T +Q G+++ + A GG +L
Sbjct: 153 HTVAICIEGTIWSWGRNQCGQLGHGNTK--TCYFPTQVVGMAKKICIRAACGGQHTLVLT 210
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
D +Y+WG YG LG ++RS K L P + +S ++ G A+
Sbjct: 211 DANKIYAWGSNAYGQLG----LNRSDKAVLQPDIV----DHLRRSGACHVLCGYSHSMAL 262
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+Y WG+N GQLGLG P P
Sbjct: 263 MKNEQIYTWGRNDCGQLGLGHYTHSPVP 290
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A GR HT+V+TDN +T+G N GQ G G ++ + + L ++ C
Sbjct: 94 VACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSP----VLIDSALNLPSVLSIAC 149
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ HT+ + G ++S G GQ G G+ P V G + + ++ + L
Sbjct: 150 GEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVG-MAKKICIRAACGGQHTLV 208
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
++D ++ WG++ YGQ+ + S+ + P ++ + S V G S L
Sbjct: 209 LTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLR-RSGACHVLCGYSHSMALMKNEQ 267
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPS--TLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+Y+WG G LG G + S P L+ + ++ Q + +A G +
Sbjct: 268 IYTWGRNDCGQLGLG-HYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG-MPP 325
Query: 306 FGHLYMWGKNQYGQLG 321
H+Y WG+ + GQLG
Sbjct: 326 LEHVYSWGRGEEGQLG 341
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPC--------LVRGEIEGERIVKLSSAVDCVLAVSDKG 197
VYS G GQ GLGH NN P L R + K SAV +++ G
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAV-----IAEDG 55
Query: 198 DVFGWGNSEYGQISE---SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
DV+ WG GQ+ +E+++ P ++ + + VA G + ++ D GL+Y+W
Sbjct: 56 DVYTWGRGWEGQLGHDVVTEIELE-PHIVPKMENRGSSA-VACGRNHTVVVTDNGLIYTW 113
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G + S P LI S L N S V S+ G AI G ++
Sbjct: 114 GENKAGQLGTG-DLKSSNSPVLIDSAL------NLPS-VLSIACGEFHTVAICIEGTIWS 165
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
WG+NQ GQLG G + FP +V
Sbjct: 166 WGRNQCGQLGHGNTKTCYFPTQV 188
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG TV ++ G N QLG+ + + P ++V +I +
Sbjct: 144 VLSIACGEFHTVAICIEG----TIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICI-- 197
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
A G HT+V+TD + +G+N++GQ G + Q H L
Sbjct: 198 --------RAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDH----LR 245
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+CG H++ L ++ ++Y+ G GQ GLGH + P LV + R+ ++
Sbjct: 246 RSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTA-LRSVRVQQI 304
Query: 184 SSAVD-CVLAVSDKGD--------VFGWGNSEYGQISESE-MQISTPRVL 223
+ D CV V+D+ + V+ WG E GQ+ +E + TPR++
Sbjct: 305 ACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIV 354
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 144/330 (43%), Gaps = 27/330 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++T + CG T+ + D ++L+ G +LG+ + NP +V
Sbjct: 74 RVTSVICGADHTIAYS---DDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVAL------- 123
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+IK +A G +H + +T N ++G N GQ G G + Q I
Sbjct: 124 ---QGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLG-----NNQDSLLPQKIKAF 175
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG + G +HT +TE G +Y GWG G GL +++ P V +EGE++V
Sbjct: 176 EGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS-SVEGEKMVL 234
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ + Q PR L K V I ++ G
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVP-ISQISGGWRH 293
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ ++G +Y WG+ GQ + + + F + K+ + G
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPV------EVNFPDEQKIVQVACGWRHTL 347
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG G + D+ P
Sbjct: 348 ALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P+ V++ +P ++ + G HTI +D+E
Sbjct: 46 GRGEDGQLGHGDSEDR--PVPTVLTSFDVP--------RVTSVICGADHTIAYSDDEMQL 95
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L+G KI CG H L +T +G+V+S
Sbjct: 96 YSWGWGDFGRLGHG-----NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSW 150
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P ++ EG + +++ + A+++ GD++GWG YG
Sbjct: 151 GRNQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 210 ISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ S+ S P +S +G ++V VA G ++ G +Y++G YG LG G
Sbjct: 210 LGLSDRDDRSVPEKVSSVEG-EKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHG--- 265
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P L P S++ G A+ G LY WG N++GQ+G+
Sbjct: 266 --DFQDHLVPRKLEALKDV-PISQIS---GGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319
Query: 326 EDQPFPLKV 334
D P++V
Sbjct: 320 VDHCSPVEV 328
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 26/277 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI IACG + T N ++ G N + QLG GN + ++ P
Sbjct: 126 MKIKQIACGDSHCLTVTF----NGQVHSWGRNQNGQLGL------GNNQDSLL-----PQ 170
Query: 62 PVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K +K +A G HT IT+ + +G +G G D + ++
Sbjct: 171 KIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGL-----SDRDDRSVPEKVS 225
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+EGEK++ CG H++ ++ SG +Y+ GW GQ G G + P + ++ I
Sbjct: 226 SVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPI 284
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++S +AV++ G ++GWG +++GQ+ + V +IV VA G
Sbjct: 285 SQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWR 344
Query: 241 ACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
L + ++SWG G LG G + R+ P +I
Sbjct: 345 HTLALTENKNIFSWGRGASGQLGHGEIIDRNT-PKMI 380
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G +H+ L V S G G DGQ G G ++ P ++ + R+ + D +
Sbjct: 28 AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLT-SFDVPRVTSVICGADHTI 86
Query: 192 AVSD-KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A SD + ++ WG ++G++ + + P+ + +G+ +I +A G S C + G
Sbjct: 87 AYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCLTVTFNG 145
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG G LG G + + +L+P + + V+ + AG AIT
Sbjct: 146 QVHSWGRNQNGQLGLG-----NNQDSLLPQKI----KAFEGVCVKMIAAGAEHTTAITEG 196
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG +YG LGL +D+ P KV +V G+K
Sbjct: 197 GDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEK 231
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ +V + S L+ G + QLG+ D + P +L + +P
Sbjct: 231 KMVLVACGWRHSVSVSSSG----ALYTYGWSKYGQLGHGDFQDHLVPRKL-EALKDVP-- 283
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I ++ G HT+ + ++ + +G N FGQ G ED +
Sbjct: 284 -------ISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGV-----EDNVDHCSPVEVNFP 331
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIV 181
+ +KI+ CG HTL LTE+ ++S G GA GQ G G + ++ TP ++ ++G
Sbjct: 332 DEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACK 391
Query: 182 KLSSA 186
+L S+
Sbjct: 392 QLESS 396
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRI 232
E + ++ +S+ + A+ V WG E GQ+ + + P VL+ V R+
Sbjct: 17 EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFD-VPRV 75
Query: 233 VDVASGGSACTMLNDEGL-VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS--- 288
V G +D+ + +YSWG+G G+ + S FNP+
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSS-------------DVFNPQPIVA 122
Query: 289 ----KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K++ + G +T G ++ WG+NQ GQLGLG +D P K+
Sbjct: 123 LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKI 172
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 16/268 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G HT+ + ++ + G N +GQ GR Q I+ LE + I+D
Sbjct: 36 VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSIEQ-------ISSLEAQTIVD 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVD 188
CG +H++ +++ G +YS G G++GQ G G+L+++ TP + G + +I+++S
Sbjct: 89 ISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITG-LFNTKIIQISCGNF 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQI--STPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+S+ G VF WG ++ GQ+ I +TP+++ KG+ +V V +GGS L+
Sbjct: 148 HSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIP-LVQVTAGGSQSFALS 206
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G V++WG GQ S MK T P + V + G ++
Sbjct: 207 MSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG----VAYISCGEEHTAVLSKD 262
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y +G + +GQLG + P K+
Sbjct: 263 GSVYTFGDDTHGQLGQNSGNQTSVPQKI 290
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 20/240 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+N FGQ ++Q E + F N E + CG+ HTL+L E G + SC
Sbjct: 2 YCWGDNCFGQLA--LLQGEK-EVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSC 58
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ G NN + +E + IV +S + +AVSD+G ++ WG+ GQ
Sbjct: 59 GQNPYGQLGRKS-NNSSIEQI--SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQ 115
Query: 210 ISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPK 264
+ + TP+ ++ ++I+ ++ G L+++G V+SWG G LG G +
Sbjct: 116 LGTGNLSSRNFTPKKITGLFN-TKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQ 174
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ P L+ S + + AG A++ G ++ WGKN GQLG +
Sbjct: 175 IINQATPQLVKSL--------KGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKS 226
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKG-NPLELVMSFVRIPLP 62
I DI+CG +V + ++ G S+ QLG + + P ++ F
Sbjct: 86 IVDISCGTNHSVAVSDEGS----IYSWGDGSEGQLGTGNLSSRNFTPKKITGLF------ 135
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIA 120
+T+I ++ G H++ ++++ F++G N GQ G G I+ + Q +
Sbjct: 136 ----NTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQL------VK 185
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER- 179
L+G ++ G + L+ SG V++ WG + LG ++ + R
Sbjct: 186 SLKGIPLVQVTAGGSQSFALSMSGTVFA--WGKNNAGQLGFKSDPMKGTFKPHAVNSLRN 243
Query: 180 --IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+ +S + +S G V+ +G+ +GQ+ + S Q S P+ + G ++ VA
Sbjct: 244 LGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAG--QVSQVA 301
Query: 237 SG 238
G
Sbjct: 302 CG 303
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 24/268 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + +T + F++GN G+ G G DYQ I L G+++ CG +++
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHG-----DYQNHEEPALITGLSGKQVAKICCGSSYSV 684
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDK 196
LT +G+VYS G G G+ G G +Q TP L++ +G RIV ++ S LAV+D
Sbjct: 685 ALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKF-FKGHRIVDVACGSGDAQTLAVTDS 743
Query: 197 GDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+ WG+ +YG++ TP+V+ + G +V V G L G VY+WG
Sbjct: 744 GAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMG-QDVVRVYCGNQFSMALTKSGAVYTWG 802
Query: 256 YG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
G LG G + + P I + KV+ + G AIT G LY W
Sbjct: 803 KGDNYRLGHGTE-DHARHPKQIEAL--------SSKKVKDIAIGSLHCMAITEDGELYGW 853
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G+N+ GQLG ++ + F +GG +
Sbjct: 854 GRNEQGQLGNPSISN--FTEPTLIGGME 879
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 41/327 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLA--TGRAHTIV 82
K++ CG ++ +LG L + V +P + S IK +A +G H++
Sbjct: 3517 KVYACGEATNGRLG----------LGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLA 3566
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + +W C I L+ +++ D CG H+
Sbjct: 3567 LTTDGKVFSWGEGDDGKLG--------HFSRWNCDKPRLIEALKSKRVRDIACGSSHSAA 3618
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
+T +G +Y+ G G G+ G G Q P V+ + ER+V+++ S LA++D+G
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEG 3677
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+ WG+ ++G++ + + P + + + ++ + G L G V++WG
Sbjct: 3678 KVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRD-QKVCQIECGAQFSLALTKSGQVWTWGK 3736
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G + KP ++ L G+ K+ + G A+T+ G ++ WG
Sbjct: 3737 GDYFRLGHGTD-AHVRKPQIVEG-LKGK-------KIVHVAVGALHCLAVTDSGQVFAWG 3787
Query: 314 KNQYGQLGLGTVEDQPFPLKVAVGGQK 340
N +GQ G GT P V + G K
Sbjct: 3788 DNDHGQQGNGTTTVNRKPALVVLEGYK 3814
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 39/248 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ DIACG + T + D L+ GL +LG+ D + P
Sbjct: 3605 RVRDIACGSSHSAAITSNGD----LYTWGLGEYGRLGHGDNTTQLKP------------- 3647
Query: 63 VKHPSTQIKHLATGR----------AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
Q+K LA R A T+ +TD +++G+ FG+ GRG +G
Sbjct: 3648 -----KQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG-----GSEG 3697
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
H + L +K+ CG +L LT+SG+V++ G G + G G + P +V
Sbjct: 3698 CNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVE 3757
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI 232
G ++G++IV ++ LAV+D G VF WG++++GQ ++ L +G +I
Sbjct: 3758 G-LKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLEGY-KI 3815
Query: 233 VDVASGGS 240
VA G S
Sbjct: 3816 SKVACGSS 3823
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 19/211 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G G DG+ G G+ + + P ++ + G+ +V +++
Sbjct: 4556 GGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVI-DSLRGKEVVDIAAGGAHSAC 4614
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
++ G+++ WG YG++ +SE Q P+++ K R+VD+A G G A T+ + D+
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQ-PRPKLVEALKSY-RVVDMACGSGDAQTLCITDD 4672
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + TL GQ KVE G A+T
Sbjct: 4673 DNVWSWGDGDYGKLGRGG--SDGCKVPMKIETLQGQGVM----KVE---CGSQFSVALTK 4723
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G +Y WGK Y +LG G+ + P KV+
Sbjct: 4724 SGSVYTWGKGDYHRLGHGSDDHVRRPRKVSA 4754
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK LA +G H + ++ +++G G+ G G D I L G+++
Sbjct: 4548 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRP-----RVIDSLRGKEV 4602
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G++Y+ G G G+ G G +Q P LV ++ R+V ++ S
Sbjct: 4603 VDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEA-LKSYRVVDMACGS 4661
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-------ESEMQISTPRVLSQCKGVSRIVDVASG 238
L ++D +V+ WG+ +YG++ + M+I T Q +GV + V G
Sbjct: 4662 GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIET----LQGQGVMK---VECG 4714
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPK--VSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
L G VY+WG Y LG G V R K + + + KV +
Sbjct: 4715 SQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQN-----------KKVIDV 4763
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A T+ G ++ WG N GQLG GT P VA
Sbjct: 4764 ACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVA 4805
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLA 192
++ TL SG+++ GWG + + LG ++ + V E + R ++L + A
Sbjct: 4451 EEWTLSWGGSGQIW--GWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFA 4508
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGL 250
V+ +G VF G G++ + +S P L + V + + V SGG C L+ EG
Sbjct: 4509 VTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGE 4568
Query: 251 VYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VYSWG G LG G + S +P +I S L G+ +V + AG IT G
Sbjct: 4569 VYSWGEGEDGKLGHGNR-SPCDRPRVIDS-LRGK-------EVVDIAAGGAHSACITANG 4619
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFP 331
LY WGK +YG+LG G EDQP P
Sbjct: 4620 ELYTWGKGRYGRLGHGDSEDQPRP 4643
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 43/225 (19%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER-IVKLSSAV- 187
+ G +LF +T+ GKVY+CG +G+ GLG + G + R I LS V
Sbjct: 3502 IVGGSKSLFCVTQEGKVYACGEATNGRLGLG---------ITTGTVSVPRQITSLSQYVI 3552
Query: 188 ---------DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
LA++ G VF WG + G++ S PR++ K R+ D+A
Sbjct: 3553 KKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKS-KRVRDIAC 3611
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G S + G +Y+WG YG LG G ++ +KP + + E ++
Sbjct: 3612 GSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQ-LKPKQVKALAH-----------ERVV 3659
Query: 295 AGPC-----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C A+T+ G +Y WG +G+LG G E P +V
Sbjct: 3660 QVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEV 3704
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ I CG ++V T N +++ G + +LG+ + P+ ++ F +
Sbjct: 672 QVAKICCGSSYSVALTS----NGEVYSWGKGNFGRLGHGSSEDQTTPM--LLKFFK---- 721
Query: 63 VKHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
+I +A +G A T+ +TD+ +++G+ +G+ GRG G C
Sbjct: 722 ----GHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRG--------GNDGCKTPK 769
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
I L G+ ++ CG ++ LT+SG VY+ G G + + G G ++ P + +
Sbjct: 770 VIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSS 828
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+++ ++ +A+++ G+++GWG +E GQ+
Sbjct: 829 KKVKDIAIGSLHCMAITEDGELYGWGRNEQGQL 861
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPR-VLSQCKGVSRIVDV 235
R V++ + V+ +G V+ G + G++ + +S PR + S + V + V V
Sbjct: 3498 RCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAV 3557
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR--SMKPTLIPSTLFGQHQFNPKSKVESL 293
SGG L +G V+SWG G G+ SR KP LI + +V +
Sbjct: 3558 HSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEAL--------KSKRVRDI 3609
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G AIT+ G LY WG +YG+LG G Q P +V
Sbjct: 3610 ACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQV 3650
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ACG G + D N+ +G G G D ++P+
Sbjct: 4653 RVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG-------------CKVPMK 4699
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ Q + + G ++ +T + +T+G + + G G +D+ + ++
Sbjct: 4700 IETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG---SDDHVRR--PRKVSA 4754
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ +K++D CG H + T++G+V+S G +GQ G G N + P LV + G++I
Sbjct: 4755 LQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLV-ASLLGKKIN 4813
Query: 182 KLS 184
+++
Sbjct: 4814 RVA 4816
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ I CG F++ TKS +++ G +LG+ + VR P
Sbjct: 3711 KVCQIECGAQFSLALTKSG----QVWTWGKGDYFRLGHGTD-----------AHVRKPQI 3755
Query: 63 VK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V+ +I H+A G H + +TD+ F +G+N GQ G G +
Sbjct: 3756 VEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPA------LVV 3809
Query: 122 LEGEKIMDAVCGQDHTL 138
LEG KI CG H++
Sbjct: 3810 LEGYKISKVACGSSHSI 3826
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG F+V TKS ++ G +LG+ VR P V
Sbjct: 4708 VMKVECGSQFSVALTKSG----SVYTWGKGDYHRLGHGSD-----------DHVRRPRKV 4752
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ ++ +A G H + TD F++G+N GQ G G +A L
Sbjct: 4753 SALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRP-----RLVASL 4807
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
G+KI CG H+L + + V + +D HL N
Sbjct: 4808 LGKKINRVACGSAHSLAWSTNKAVSAGKLPSDIPMEYNHLQN 4849
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S I + TGR H I ++ N + +GN+ FGQ G G + + + + +
Sbjct: 139 SLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLG-----NKEAQHLPIRMEFFRDKS 193
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I+D CG DH+ +++ G+V++ G+G DGQ G ++ P + I GE I +++
Sbjct: 194 IVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELT-VIRGEGISRVTCG 252
Query: 187 VDCV-LAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM 244
D L +G +F +GN E GQ+ E + P V+ + + +VA+GG+
Sbjct: 253 TDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVP----LDNVKEVAAGGAHMLA 308
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G +SWG+ G LG G +KP IP+ P V S+ AG
Sbjct: 309 LTKDGQAWSWGWGEDGRLGHG-ATEDFLKPEPIPT-------LGPAVGVVSVSAGGGHSL 360
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG N G+LGLG
Sbjct: 361 ALTESGQVYGWGFNASGRLGLG 382
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 143/324 (44%), Gaps = 43/324 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHL--ATGRAHTIVIT 84
++ CG ++QLG D + ++P+PV+ ++ A G ++T
Sbjct: 55 VYTCGTGRNAQLGVGD-----------LEDYQLPVPVQELPVGASYIDAAAGWTQNFLLT 103
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ +G++ + +++ C L I+ G+ H + L+++G
Sbjct: 104 TRHELYYWGSSGVYAL-LPMRRDKRIYYPTLCEPAQSL---GIVKIRTGRQHGIALSKNG 159
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLSSAVDCVLAVSDKGDVFGWG 203
+VY G GQTGLG+ Q P +R E + IV +S +D AVS G V+ WG
Sbjct: 160 EVYIWGNSEFGQTGLGNKEAQHLP--IRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWG 217
Query: 204 NSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND-EGLVYSWGYGL 258
GQ+ +E E++ P+ L+ +G I V G +LN+ EG ++++G G
Sbjct: 218 YGIDGQLGHNGTEDELK---PKELTVIRGEG-ISRVTCGTDFTGLLNETEGRLFTFGNGE 273
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ R + L PS + P V+ + AG A+T G + WG + G
Sbjct: 274 AGQLGHGERGL--CLEPSVV-------PLDNVKEVAAGGAHMLALTKDGQAWSWGWGEDG 324
Query: 319 QLGLGTVED----QPFP-LKVAVG 337
+LG G ED +P P L AVG
Sbjct: 325 RLGHGATEDFLKPEPIPTLGPAVG 348
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ + CG FT + +++ + LF G QLG+ + +G LE P
Sbjct: 246 ISRVTCGTDFTGLLNETEGR---LFTFGNGEAGQLGHGE---RGLCLE----------PS 289
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
P +K +A G AH + +T + A+++G G+ G G ED+ +
Sbjct: 290 VVPLDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGAT--EDFLKPEPIPTLGPAV 347
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ G H+L LTESG+VY G+ A G+ GLG+ ++ TP L++ + +R+++
Sbjct: 348 G--VVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKA-LADKRVLRA 404
Query: 184 SSAVDCVLAVS 194
+D L ++
Sbjct: 405 ICGLDHSLFIT 415
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+P P+ + ++ G H++ +T++ + +G N+ G+ G G E +
Sbjct: 339 PIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLG--NESSVMTPTLIKAL 396
Query: 120 ADLEGEKIMDAVCGQDHTLFLTES 143
AD ++++ A+CG DH+LF+T++
Sbjct: 397 AD---KRVLRAICGLDHSLFITQA 417
>gi|189234725|ref|XP_973452.2| PREDICTED: similar to nimA-like kinase CG10951-PA [Tribolium
castaneum]
Length = 715
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+P + P I + G +H+IV+T + T+G N FGQ G + Q + F +
Sbjct: 300 IPQELPHKTIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGIN-----NTQKQTFATIVK 354
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L+ EKI+ G++ +LFL G V+SCG G G G+ ++ ++P ++ + E+I
Sbjct: 355 SLQHEKIIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHGNWDSVQSPTIIEALMH-EKI 413
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+S + V+A+S +G VF WG+S+ GQ+ + MQ + + +++I D+ G +
Sbjct: 414 AKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCSPLAIKLLNLTKIKDIFCGEN 473
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP---KSKVESLI 294
+L G V G Y LG V+ K L F P + K++ +
Sbjct: 474 ETVLLTINGQVLVSGLNNYRKLG----VADQEKIYL----------FTPVPIREKIKFVS 519
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G +T G L G+N GQLG G + P P + +
Sbjct: 520 IGLNHTMMLTENGVLIALGRNSEGQLGKGNFINYPQPQTIKL 561
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI I+CG V + ++F G + + QLG + + +PL + + +
Sbjct: 412 KIAKISCGDEHVVALSTEG----RVFTWGSSKNGQLGQGHMQYRCSPLAIKLLNL----- 462
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
T+IK + G T+++T N G N++ + G Q K + +
Sbjct: 463 -----TKIKDIFCGENETVLLTINGQVLVSGLNNYRKLGVA------DQEKIYLFTPVPI 511
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EKI G +HT+ LTE+G + + G ++GQ G G+ N P ++ +I
Sbjct: 512 R-EKIKFVSIGLNHTMMLTENGVLIALGRNSEGQLGKGNFINYPQPQTIKLR---NKITM 567
Query: 183 LSSAVDCVLAVSDKGDVFGWGNS 205
++ ++ +A ++ V+ WG+S
Sbjct: 568 IACGLNFTVAADNRNVVWFWGSS 590
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV 229
++ E+ + I+ S + V+ V WG +++GQ+ + Q T + +
Sbjct: 299 IIPQELPHKTIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGINNTQKQTFATIVKSLQH 358
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+I+ A+G + LN EG+V+S G G LG G PT+I + + H+
Sbjct: 359 EKIIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHG-NWDSVQSPTIIEALM---HE--- 411
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
K+ + G A++ G ++ WG ++ GQLG G ++ + PL + +
Sbjct: 412 --KIAKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCSPLAIKL 459
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 144/330 (43%), Gaps = 27/330 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++T + CG T+ + D ++L+ G +LG+ + NP +V
Sbjct: 74 RVTSVICGADHTIAYS---DDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVAL------- 123
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+IK +A G +H + +T N ++G N GQ G G + Q I
Sbjct: 124 ---QGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLG-----NNQDSLLPQKIKAF 175
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG + G +HT +TE G +Y GWG G GL +++ P V +EGE++V
Sbjct: 176 EGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS-SVEGEKMVL 234
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ + Q PR L K V I ++ G
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVP-ISQISGGWRH 293
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ ++G +Y WG+ GQ + + + F + K+ + G
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPV------EVNFPDEQKIVQVACGWRHTL 347
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG G + D+ P
Sbjct: 348 ALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P+ V++ +P ++ + G HTI +D+E
Sbjct: 46 GRGEDGQLGHGDSEDR--PVPTVLTSFDVP--------RVTSVICGADHTIAYSDDEMQL 95
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L+G KI CG H L +T +G+V+S
Sbjct: 96 YSWGWGDFGRLGHG-----NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSW 150
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P ++ EG + +++ + A+++ GD++GWG YG
Sbjct: 151 GRNQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 210 ISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ S+ S P +S +G ++V VA G ++ G +Y++G YG LG G
Sbjct: 210 LGLSDRDDRSVPEKVSSVEG-EKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHG--- 265
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P L P S++ G A+ G LY WG N++GQ+G+
Sbjct: 266 --DFQDHLVPRKLEALKDV-PISQIS---GGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319
Query: 326 EDQPFPLKV 334
D P++V
Sbjct: 320 VDHCSPVEV 328
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 26/277 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI IACG + T N ++ G N + QLG GN + ++ P
Sbjct: 126 MKIKQIACGDSHCLTVTF----NGQVHSWGRNQNGQLGL------GNNQDSLL-----PQ 170
Query: 62 PVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K +K +A G HT IT+ + +G +G G D + ++
Sbjct: 171 KIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGL-----SDRDDRSVPEKVS 225
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+EGEK++ CG H++ ++ SG +Y+ GW GQ G G + P + ++ I
Sbjct: 226 SVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPI 284
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++S +AV++ G ++GWG +++GQ+ + V +IV VA G
Sbjct: 285 SQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWR 344
Query: 241 ACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
L + ++SWG G LG G + R+ P +I
Sbjct: 345 HTLALTENKNIFSWGRGASGQLGHGEIIDRNT-PKMI 380
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G +H+ L V S G G DGQ G G ++ P ++ + R+ + D +
Sbjct: 28 AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLT-SFDVPRVTSVICGADHTI 86
Query: 192 AVSD-KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A SD + ++ WG ++G++ + + P+ + +G+ +I +A G S C + G
Sbjct: 87 AYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCLTVTFNG 145
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG G LG G + + +L+P + + V+ + AG AIT
Sbjct: 146 QVHSWGRNQNGQLGLG-----NNQDSLLPQKI----KAFEGVCVKMIAAGAEHTTAITEG 196
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG +YG LGL +D+ P KV +V G+K
Sbjct: 197 GDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEK 231
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ +V + S L+ G + QLG+ D + P +L + +P
Sbjct: 231 KMVLVACGWRHSVSVSSSG----ALYTYGWSKYGQLGHGDFQDHLVPRKL-EALKDVP-- 283
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I ++ G HT+ + ++ + +G N FGQ G ED +
Sbjct: 284 -------ISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGV-----EDNVDHCSPVEVNFP 331
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIV 181
+ +KI+ CG HTL LTE+ ++S G GA GQ G G + ++ TP ++ ++G
Sbjct: 332 DEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACK 391
Query: 182 KLSSA 186
+L S+
Sbjct: 392 QLESS 396
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRI 232
E + ++ +S+ + A+ V WG E GQ+ + + P VL+ V R+
Sbjct: 17 EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFD-VPRV 75
Query: 233 VDVASGGSACTMLNDEGL-VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS--- 288
V G +D+ + +YSWG+G G+ + S FNP+
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSS-------------DVFNPQPIVA 122
Query: 289 ----KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K++ + G +T G ++ WG+NQ GQLGLG +D P K+
Sbjct: 123 LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKI 172
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 27/309 (8%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P L +F P V + G HT +D E
Sbjct: 50 GRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA------SVVICGADHTTAYSDEELQL 103
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L+G +I CG H L +T +G V+S
Sbjct: 104 YSWGWGDFGRLGHG-----NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSW 158
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P ++ EG R+ +++ + AV++ GD++GWG YG
Sbjct: 159 GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 217
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S G ++V VA G ++ G +Y++G YG LG G
Sbjct: 218 LGLGDRDDRLIPEKVSSVNG-QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHG--- 273
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P L + + + + G A+ G LY WG N++GQ+G+G
Sbjct: 274 --DFEDHLVPHKL----EALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDN 327
Query: 326 EDQPFPLKV 334
ED P++V
Sbjct: 328 EDHCSPVQV 336
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 141/327 (43%), Gaps = 29/327 (8%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLEL-VMSFVRIPLPVKH 65
+ CG T T D+ L+L+ G +LG+ + NP + + VRI
Sbjct: 86 VICGADHT---TAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI------ 136
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
TQI A G +H + +T ++G N GQ G G ++ K I EG
Sbjct: 137 --TQI---ACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQK-----IQAFEGV 186
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G +HT +TE G +Y GWG G GLG +++ P V + G+++V ++
Sbjct: 187 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVS-SVNGQKMVLVAC 245
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM 244
+ VS G ++ +G S+YGQ+ + + P L K + I ++ G
Sbjct: 246 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTT-ISQISGGWRHTMA 304
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
L +G +Y WG+ GQ + + Q F + KV + G A+T
Sbjct: 305 LAADGKLYGWGWNKFGQVGVGDNEDHCSPV------QVNFPNEQKVVQVACGWRHTLALT 358
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+++ WG+ GQLG G + D+ P
Sbjct: 359 EAKNVFSWGRGTSGQLGHGEIVDRNIP 385
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++IT IACG + T + + G N + QLG + P + + +F +
Sbjct: 134 VRITQIACGDSHCLAVTVAG----HVHSWGRNQNGQLGLGNTEDSLLP-QKIQAFEGV-- 186
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++K +A G HT +T++ + +G +G G G D + ++
Sbjct: 187 -------RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRDDRLIPEKVSS 234
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ G+K++ CG HT+ ++ SG +Y+ GW GQ G G + P + ++ I
Sbjct: 235 VNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTIS 293
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + + V ++V VA G
Sbjct: 294 QISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRH 353
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
L + V+SWG G LG G V R++ P +I
Sbjct: 354 TLALTEAKNVFSWGRGTSGQLGHGEIVDRNI-PKMI 388
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G +H++ + ++G GQ G G ++ D G
Sbjct: 23 PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTV-LTAAFDDAPGG 81
Query: 126 KIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+CG DH T + E ++YS GWG G+ G G+ ++ P ++ ++G RI +++
Sbjct: 82 VASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQA-LQGVRITQIA 140
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ G V WG ++ GQ+ + S P+ + +GV R+ +A+G
Sbjct: 141 CGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTA 199
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIP---STLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R LIP S++ GQ K+ + G
Sbjct: 200 AVTEDGDLYGWGWGRYGNLGLGDRDDR-----LIPEKVSSVNGQ-------KMVLVACGW 247
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G +Y +G ++YGQLG G ED P K+
Sbjct: 248 RHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 284
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAVD 188
G H++ L G V S G G DGQ G G ++ P ++ + G + D
Sbjct: 32 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGAD 91
Query: 189 CVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A SD+ ++ WG ++G++ + + P+ + +GV RI +A G S C +
Sbjct: 92 HTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSHCLAVT 150
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+SWG G LG G + + +L+P + Q +V+ + AG A+
Sbjct: 151 VAGHVHSWGRNQNGQLGLG-----NTEDSLLPQKI----QAFEGVRVKMIAAGAEHTAAV 201
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
T G LY WG +YG LGLG +D+ P KV +V GQK
Sbjct: 202 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 239
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 32/196 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ T+ + S ++ G + QLG+ D P +L
Sbjct: 239 KMVLVACGWRHTITVSSSG----SIYTYGWSKYGQLGHGDFEDHLVPHKLEAL------- 287
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-AD 121
T I ++ G HT+ + + + +G N FGQ G G ED+ C + +
Sbjct: 288 ---KDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG--DNEDH-----CSPVQVN 337
Query: 122 LEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG------- 173
E K++ CG HTL LTE+ V+S G G GQ G G + ++ P ++
Sbjct: 338 FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSA 397
Query: 174 --EIEGERIVKLSSAV 187
++E + V +S+ V
Sbjct: 398 CKQLESSKAVPMSAKV 413
>gi|270002180|gb|EEZ98627.1| hypothetical protein TcasGA2_TC001150 [Tribolium castaneum]
Length = 766
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+P + P I + G +H+IV+T + T+G N FGQ G + Q + F +
Sbjct: 300 IPQELPHKTIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGIN-----NTQKQTFATIVK 354
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L+ EKI+ G++ +LFL G V+SCG G G G+ ++ ++P ++ + E+I
Sbjct: 355 SLQHEKIIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHGNWDSVQSPTIIEA-LMHEKI 413
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+S + V+A+S +G VF WG+S+ GQ+ + MQ + + +++I D+ G +
Sbjct: 414 AKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCSPLAIKLLNLTKIKDIFCGEN 473
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP---KSKVESLI 294
+L G V G Y LG V+ K L F P + K++ +
Sbjct: 474 ETVLLTINGQVLVSGLNNYRKLG----VADQEKIYL----------FTPVPIREKIKFVS 519
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
G +T G L G+N GQLG G + P P + + +
Sbjct: 520 IGLNHTMMLTENGVLIALGRNSEGQLGKGNFINYPQPQTIKLRNK 564
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI I+CG V + ++F G + + QLG + + +PL + + +
Sbjct: 412 KIAKISCGDEHVVALSTEG----RVFTWGSSKNGQLGQGHMQYRCSPLAIKLLNL----- 462
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
T+IK + G T+++T N G N++ + G Q K + +
Sbjct: 463 -----TKIKDIFCGENETVLLTINGQVLVSGLNNYRKLGVA------DQEKIYLFTPVPI 511
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EKI G +HT+ LTE+G + + G ++GQ G G+ N P ++ +I
Sbjct: 512 R-EKIKFVSIGLNHTMMLTENGVLIALGRNSEGQLGKGNFINYPQPQTIKLR---NKITM 567
Query: 183 LSSAVDCVLAVSDKGDVFGWGNS 205
++ ++ +A ++ V+ WG+S
Sbjct: 568 IACGLNFTVAADNRNVVWFWGSS 590
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV 229
++ E+ + I+ S + V+ V WG +++GQ+ + Q T + +
Sbjct: 299 IIPQELPHKTIIDFSIGYSHSIVVTIDHCVHTWGENDFGQLGINNTQKQTFATIVKSLQH 358
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+I+ A+G + LN EG+V+S G G LG G PT+I + + H+
Sbjct: 359 EKIIRCAAGRNFSLFLNAEGVVFSCGDAQQGCLGHG-NWDSVQSPTIIEALM---HE--- 411
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
K+ + G A++ G ++ WG ++ GQLG G ++ + PL + +
Sbjct: 412 --KIAKISCGDEHVVALSTEGRVFTWGSSKNGQLGQGHMQYRCSPLAIKL 459
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 27/309 (8%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P L +F P V + G HT +D E
Sbjct: 45 GRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA------SVVICGADHTTAYSDEELQL 98
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L+G +I CG H L +T +G V+S
Sbjct: 99 YSWGWGDFGRLGHG-----NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSW 153
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P ++ EG R+ +++ + AV++ GD++GWG YG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 212
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S G ++V VA G ++ G +Y++G YG LG G
Sbjct: 213 LGLGDRDDRLIPEKVSSVNG-QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHG--- 268
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P L + + + + G A+ G LY WG N++GQ+G+G
Sbjct: 269 --DFEDHLVPHKL----EALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDN 322
Query: 326 EDQPFPLKV 334
ED P++V
Sbjct: 323 EDHCSPVQV 331
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 29/327 (8%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLEL-VMSFVRIPLPVKH 65
+ CG T T D+ L+L+ G +LG+ + NP + + VRI
Sbjct: 81 VICGADHT---TAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI------ 131
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
TQI A G +H + +T ++G N GQ G G ++ I EG
Sbjct: 132 --TQI---ACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTED-----SLLPQKIQAFEGV 181
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G +HT +TE G +Y GWG G GLG +++ P V + G+++V ++
Sbjct: 182 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVS-SVNGQKMVLVAC 240
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM 244
+ VS G ++ +G S+YGQ+ + + P L K + I ++ G
Sbjct: 241 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTT-ISQISGGWRHTMA 299
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
L +G +Y WG+ GQ + + Q F + KV + G A+T
Sbjct: 300 LAADGKLYGWGWNKFGQVGVGDNEDHCSPV------QVNFPNEQKVVQVACGWRHTLALT 353
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+++ WG+ GQLG G + D+ P
Sbjct: 354 EAKNVFSWGRGTSGQLGHGEIVDRNIP 380
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++IT IACG + T + + G N + QLG + P + + +F +
Sbjct: 129 VRITQIACGDSHCLAVTVAG----HVHSWGRNQNGQLGLGNTEDSLLP-QKIQAFEGV-- 181
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++K +A G HT +T++ + +G +G G G D + ++
Sbjct: 182 -------RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRDDRLIPEKVSS 229
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ G+K++ CG HT+ ++ SG +Y+ GW GQ G G + P + ++ I
Sbjct: 230 VNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTIS 288
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + + V ++V VA G
Sbjct: 289 QISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRH 348
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
L + V+SWG G LG G V R++ P +I
Sbjct: 349 TLALTEAKNVFSWGRGTSGQLGHGEIVDRNI-PKMI 383
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G +H++ + ++G GQ G G ++ D G
Sbjct: 18 PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTV-LTAAFDDAPGG 76
Query: 126 KIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+CG DH T + E ++YS GWG G+ G G+ ++ P ++ ++G RI +++
Sbjct: 77 VASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQA-LQGVRITQIA 135
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ G V WG ++ GQ+ + S P+ + +GV R+ +A+G
Sbjct: 136 CGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTA 194
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIP---STLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R LIP S++ GQ K+ + G
Sbjct: 195 AVTEDGDLYGWGWGRYGNLGLGDRDDR-----LIPEKVSSVNGQ-------KMVLVACGW 242
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G +Y +G ++YGQLG G ED P K+
Sbjct: 243 RHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAVD 188
G H++ L G V S G G DGQ G G ++ P ++ + G + D
Sbjct: 27 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGAD 86
Query: 189 CVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A SD+ ++ WG ++G++ + + P+ + +GV RI +A G S C +
Sbjct: 87 HTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSHCLAVT 145
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+SWG G LG G + + +L+P + Q +V+ + AG A+
Sbjct: 146 VAGHVHSWGRNQNGQLGLG-----NTEDSLLPQKI----QAFEGVRVKMIAAGAEHTAAV 196
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
T G LY WG +YG LGLG +D+ P KV +V GQK
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 32/196 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ T+ + S ++ G + QLG+ D P +L
Sbjct: 234 KMVLVACGWRHTITVSSSG----SIYTYGWSKYGQLGHGDFEDHLVPHKLEAL------- 282
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-AD 121
T I ++ G HT+ + + + +G N FGQ G G ED+ C + +
Sbjct: 283 ---KDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG--DNEDH-----CSPVQVN 332
Query: 122 LEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG------- 173
E K++ CG HTL LTE+ V+S G G GQ G G + ++ P ++
Sbjct: 333 FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSA 392
Query: 174 --EIEGERIVKLSSAV 187
++E + V +S+ V
Sbjct: 393 CKQLESSKAVPMSAKV 408
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 39/343 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I I CG T ++S+ ++++ G +LG+ GN +L F P+
Sbjct: 70 LDIISITCGADHTTSYSESR---MEVYSWGWGDFGRLGH------GNSSDL---FTPQPI 117
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H S +I+ +A G +H + +T + ++G N GQ G G ++ K I
Sbjct: 118 KALH-SLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQK-----IQA 171
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G I G +HT +TE G++Y GWG G GLG N++ P V + G++++
Sbjct: 172 FQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS-LVNGDKMI 230
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
++ ++VS G ++ +G S+YGQ+ + + TP + + + + SGG
Sbjct: 231 MVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALR--DSYISMISGGW 288
Query: 241 ACTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
TM L +G +Y WG+ GQ G + P Q +F P + SL+
Sbjct: 289 RHTMALTSDGNLYGWGWNKFGQVGVGDNIDH-CSPV--------QVKF-PHEQAHSLVQI 338
Query: 297 PCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
C + AIT +++ WG+ GQLG G D+ P + V
Sbjct: 339 SCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEV 381
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P Q+ ++ G +H++ + ++G GQ G G D + + ++ L
Sbjct: 13 VSGPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHG-----DAEDRPTPTQLSTL 67
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G I+ CG DHT +ES +VYS GWG G+ G G+ ++ TP ++ + +I
Sbjct: 68 DGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKA-LHSLKIR 126
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ G+V WG ++ GQ+ + S P+ + +GVS I VA+G
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVS-IKMVAAGAE 185
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R L+P + K+ + G
Sbjct: 186 HTAAVTEDGELYGWGWGRYGNLGLGDRNDR-----LVPEKV----SLVNGDKMIMVACGW 236
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++++ G LY +G ++YGQLG G ED P KV
Sbjct: 237 RHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKV 273
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H++ L V S G G DGQ G G ++ TP + ++G I+ ++ D
Sbjct: 25 AGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLS-TLDGLDIISITCGADHTT 83
Query: 192 AVSD-KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+ S+ + +V+ WG ++G++ + + TP+ + + +I +A G S C + +G
Sbjct: 84 SYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSL-KIRQIACGDSHCLAVTMDG 142
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V SWG G LG G + + +L+P + Q ++ + AG A+T
Sbjct: 143 EVQSWGRNQNGQLGLG-----TTEDSLVPQKI----QAFQGVSIKMVAAGAEHTAAVTED 193
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G LY WG +YG LGLG D+ P KV++
Sbjct: 194 GELYGWGWGRYGNLGLGDRNDRLVPEKVSL 223
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T N F FG N G G D Q + L G+KI+D G H L
Sbjct: 105 IYTTQNNEVFVFGMNISSCLGTG-----DNQSTIMPRRLDVLCGKKIVDLSYGSGPHILL 159
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G+VYS WG +G + LG+ N + TP V E+ +++++++ +A++ G
Sbjct: 160 CNEDGEVYS--WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 217
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S + S PR ++ +V +++G ++ L D G VY WGY
Sbjct: 218 EVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGY 277
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G ++ M L+ F Q P ++ ++ T A+++ G LY WG
Sbjct: 278 NGTGQLGLGNTGNQLMPCRLV----FAQ----PICIIQVVLGYAHTL-ALSDQGVLYAWG 328
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N +GQLG+G +Q P+KV
Sbjct: 329 ANSHGQLGIGNKSNQTVPVKV 349
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + +N ++F G+N S LG D + P L + +
Sbjct: 94 ACVFGCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGK--------- 144
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G I++ + +G +++G+N + Q G G QG +L +K
Sbjct: 145 -KIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNG----NTIQGTTPVQVCMELLSKK 199
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H++ LT G+V+S G+ GQ G G NQ P V ++ + +V +S+
Sbjct: 200 VIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAG 259
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSAC 242
+A++D G V+GWG + GQ+ +T L C+ V I+ V G +
Sbjct: 260 QTSSMALTDNGHVYGWGYNGTGQLGLG----NTGNQLMPCRLVFAQPICIIQVVLGYAHT 315
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L+D+G++Y+WG +G LG G K +++ +P + + + S
Sbjct: 316 LALSDQGVLYAWGANSHGQLGIGNKSNQT-----VPVKVGTNERMVEVTACHSTNIS--- 367
Query: 300 FGAITNFGHLYMWG 313
A + G +YMWG
Sbjct: 368 -AAKSQSGQVYMWG 380
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 18/213 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DC 189
C + ++ T++ +V+ +G + + LG +NQ T R ++ G++IV LS
Sbjct: 99 CSANEAIYTTQNNEVFV--FGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPH 156
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+L ++ G+V+ WG++ Y Q+ + +Q +TP + +++ VA G L +
Sbjct: 157 ILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSD 216
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAIT 304
G V+SWGY G +G G ++S+ P + S+L +SKV S+ AG + A+T
Sbjct: 217 GEVFSWGYNNCGQVGSGTTANQSV-PRKVASSL--------QSKVVVSISAGQTSSMALT 267
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ GH+Y WG N GQLGLG +Q P ++
Sbjct: 268 DNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFA 300
>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 530
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 23/262 (8%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
I T N F FG NS G G D Q + L G++I+D G H L
Sbjct: 34 AIYTTQNNEVFVFGMNSSNCLGTG-----DNQSTIIPRRLDVLCGKRIVDLSYGSGPHIL 88
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
E G+VYS WG +G + LG+ N + P V E+ +++V+++ +A++
Sbjct: 89 VCNEDGEVYS--WGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSD 146
Query: 197 GDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G+VF WG + GQ+ S + S PR +S +V +A+G S+ + D G VY WG
Sbjct: 147 GEVFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWG 206
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y G LG G ++ L+P L H P ++ ++ T A+++ G LY W
Sbjct: 207 YNGTGQLGIGNTGNQ-----LMPCRLVFAH---PVCIIQVVLGYAHTL-ALSDQGVLYAW 257
Query: 313 GKNQYGQLGLGTVEDQPFPLKV 334
G N +GQLG+G +Q P+KV
Sbjct: 258 GANSHGQLGIGNKSNQTAPVKV 279
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 37/315 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLEL-VMSFVRIPLPVKHP 66
AC +G +N ++F G+NS + LG D + P L V+ RI
Sbjct: 24 ACIFGSAANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCGKRIV------ 77
Query: 67 STQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
L+ G I++ + +G +++G+N + Q G G QG +L +
Sbjct: 78 -----DLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNG----NAIQGVAPVQVCMELLAK 128
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
K++ CG H++ LT G+V+ G+ GQ G G NQ P V ++ + +V +++
Sbjct: 129 KVVQVACGSHHSMALTSDGEVFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAA 188
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSA 241
+AV+D G V+ WG + GQ+ +T L C+ V I+ V G +
Sbjct: 189 GQSSSMAVTDNGHVYCWGYNGTGQLGIG----NTGNQLMPCRLVFAHPVCIIQVVLGYAH 244
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+D+G++Y+WG +G LG G K S P + + N + +
Sbjct: 245 TLALSDQGVLYAWGANSHGQLGIGNK-SNQTAPVKVGT--------NERMVEVTACHSTN 295
Query: 299 TFGAITNFGHLYMWG 313
A + G +YMWG
Sbjct: 296 ISAAKSQSGQVYMWG 310
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DCVLA 192
+ ++ T++ +V+ +G + LG +NQ T R ++ G+RIV LS +L
Sbjct: 32 NEAIYTTQNNEVFV--FGMNSSNCLGTGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILV 89
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G+V+ WG++ Y Q+ + +Q P + ++V VA G L +G V
Sbjct: 90 CNEDGEVYSWGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSDGEV 149
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAITNFG 307
+ WGY G +G G ++S+ P + +TL +SKV S+ AG + A+T+ G
Sbjct: 150 FCWGYNNCGQVGSGTTANQSV-PRRVSATL--------QSKVVVSIAAGQSSSMAVTDNG 200
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
H+Y WG N GQLG+G +Q P ++
Sbjct: 201 HVYCWGYNGTGQLGIGNTGNQLMPCRL 227
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG-GSAC 242
SA + + + +VF +G + + + Q + PR L G RIVD++ G G
Sbjct: 29 SAANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHI 87
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ N++G VYSWG Y LG G + + + P + L + KV + G
Sbjct: 88 LVCNEDGEVYSWGHNGYSQLGNGNAI-QGVAPVQVCMELLAK-------KVVQVACGSHH 139
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+T+ G ++ WG N GQ+G GT +Q P +V+ Q
Sbjct: 140 SMALTSDGEVFCWGYNNCGQVGSGTTANQSVPRRVSATLQ 179
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T N F FG N G G D Q + L G+KI+D G H L
Sbjct: 35 IYTTQNNEVFVFGMNISSCLGTG-----DNQSTIMPRRLDVLCGKKIVDLSYGSGPHILL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G+VYS WG +G + LG+ N + TP V E+ +++++++ +A++ G
Sbjct: 90 CNEDGEVYS--WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 147
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S + S PR ++ +V +++G ++ L D G VY WGY
Sbjct: 148 EVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGY 207
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G ++ M L+ F Q P ++ ++ T A+++ G LY WG
Sbjct: 208 NGTGQLGLGNTGNQLMPCRLV----FAQ----PICIIQVVLGYAHTL-ALSDQGVLYAWG 258
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N +GQLG+G +Q P+KV
Sbjct: 259 ANSHGQLGIGNKSNQTVPVKV 279
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 142/314 (45%), Gaps = 35/314 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + +N ++F G+N S LG D + P L + +
Sbjct: 24 ACVFGCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGK--------- 74
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G I++ + +G +++G+N + Q G G QG +L +K
Sbjct: 75 -KIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNG----NTIQGTTPVQVCMELLSKK 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H++ LT G+V+S G+ GQ G G NQ P V ++ + +V +S+
Sbjct: 130 VIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSAC 242
+A++D G V+GWG + GQ+ +T L C+ V I+ V G +
Sbjct: 190 QTSSMALTDNGHVYGWGYNGTGQLGLG----NTGNQLMPCRLVFAQPICIIQVVLGYAHT 245
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L+D+G++Y+WG +G LG G K ++++ P + + N + +
Sbjct: 246 LALSDQGVLYAWGANSHGQLGIGNKSNQTV-PVKVGT--------NERMVEVTACHSTNI 296
Query: 300 FGAITNFGHLYMWG 313
A + G +YMWG
Sbjct: 297 SAAKSQSGQVYMWG 310
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 18/211 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DC 189
C + ++ T++ +V+ +G + + LG +NQ T R ++ G++IV LS
Sbjct: 29 CSANEAIYTTQNNEVFV--FGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPH 86
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+L ++ G+V+ WG++ Y Q+ + +Q +TP + +++ VA G L +
Sbjct: 87 ILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSD 146
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAIT 304
G V+SWGY G +G G ++S+ P + S+L +SKV S+ AG + A+T
Sbjct: 147 GEVFSWGYNNCGQVGSGTTANQSV-PRKVASSL--------QSKVVVSISAGQTSSMALT 197
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ GH+Y WG N GQLGLG +Q P ++
Sbjct: 198 DNGHVYGWGYNGTGQLGLGNTGNQLMPCRLV 228
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T N F FG N G G D Q + L G+KI+D G H L
Sbjct: 94 IYTTQNNEVFVFGMNISSCLGTG-----DNQSTIMPRRLDVLCGKKIVDLSYGSGPHILL 148
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G+VYS WG +G + LG+ N + TP V E+ +++++++ +A++ G
Sbjct: 149 CNEDGEVYS--WGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 206
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S + S PR ++ +V +++G ++ L D G VY WGY
Sbjct: 207 EVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGY 266
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G ++ M L+ F Q P ++ ++ T A+++ G LY WG
Sbjct: 267 NGTGQLGLGNTGNQLMPCRLV----FAQ----PICIIQVVLGYAHTL-ALSDQGVLYAWG 317
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N +GQLG+G +Q P+KV
Sbjct: 318 ANSHGQLGIGNKSNQTVPVKV 338
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + +N ++F G+N S LG D + P L + +
Sbjct: 83 ACVFGCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGK--------- 133
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G I++ + +G +++G+N + Q G G QG +L +K
Sbjct: 134 -KIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNG----NTIQGTTPVQVCMELLSKK 188
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H++ LT G+V+S G+ GQ G G NQ P V ++ + +V +S+
Sbjct: 189 VIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAG 248
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSAC 242
+A++D G V+GWG + GQ+ +T L C+ V I+ V G +
Sbjct: 249 QTSSMALTDNGHVYGWGYNGTGQLGLG----NTGNQLMPCRLVFAQPICIIQVVLGYAHT 304
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSM 269
L+D+G++Y+WG +G LG G K ++++
Sbjct: 305 LALSDQGVLYAWGANSHGQLGIGNKSNQTV 334
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 18/213 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DC 189
C + ++ T++ +V+ +G + + LG +NQ T R ++ G++IV LS
Sbjct: 88 CSANEAIYTTQNNEVFV--FGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPH 145
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+L ++ G+V+ WG++ Y Q+ + +Q +TP + +++ VA G L +
Sbjct: 146 ILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSD 205
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAIT 304
G V+SWGY G +G G ++S+ P + S+L +SKV S+ AG + A+T
Sbjct: 206 GEVFSWGYNNCGQVGSGTTANQSV-PRKVASSL--------QSKVVVSISAGQTSSMALT 256
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ GH+Y WG N GQLGLG +Q P ++
Sbjct: 257 DNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFA 289
>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oryzias latipes]
Length = 397
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 34/268 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-----G 124
I+ + G HT VIT+ F G N GQ G G C +IA +
Sbjct: 45 IRVVRGGGGHTAVITEGGEVFVCGQNHKGQLGIG-----------HCADIATFQICPIFN 93
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKL 183
+++ D CG D +L LTE G++ +CG A GQ G+G + + P LV E IV +
Sbjct: 94 QRVTDVACGWDFSLLLTEGGRLLACGSNAFGQLGVGETVTHIADPLLVEVRFH-EPIVSV 152
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
++ + LAV+D G V+ WGN + + + EM R +C + V V +G + C
Sbjct: 153 AAGLRHSLAVNDSGCVYQWGNGLFSHVDDKEM-----RTGDKCLSQKKSVLVKAGSAHCV 207
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP---STLFGQHQFNPKSKVESLIAGPCTF 300
L +EG ++ WG Q S S P+ P S L G+ KV ++ +G
Sbjct: 208 CLTEEGELFLWGSNKHEQ-LGTSESFLPSPTPLRRSLLNGE-------KVSNVWSGWSHI 259
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
A T G ++ WG+ YGQLG + Q
Sbjct: 260 IAQTESGRVFTWGRGDYGQLGRPNSDSQ 287
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 22/247 (8%)
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
T+G NS+GQ G+G +++ +++L+ + I G HT +TE G+V+ CG
Sbjct: 12 TWGANSYGQLGQGHAEDQLVP---RLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCG 68
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ- 209
GQ G+GH + T + I +R+ ++ D L +++ G + G++ +GQ
Sbjct: 69 QNHKGQLGIGHCADIATFQIC--PIFNQRVTDVACGWDFSLLLTEGGRLLACGSNAFGQL 126
Query: 210 -ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSR 267
+ E+ I+ P +L + + IV VA+G +ND G VY WG GL K R
Sbjct: 127 GVGETVTHIADP-LLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQWGNGLFSHVDDKEMR 185
Query: 268 SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVE 326
+ L + K + AG +T G L++WG N++ QLG +
Sbjct: 186 TGDKCL------------SQKKSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTSESFL 233
Query: 327 DQPFPLK 333
P PL+
Sbjct: 234 PSPTPLR 240
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++TD+ACG+ F+++ T+ +L CG N+ QLG G + + + + +
Sbjct: 95 RVTDVACGWDFSLLLTEGG----RLLACGSNAFGQLGV------GETVTHIADPLLVEVR 144
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P I +A G H++ + D+ + +GN F V +++ + C L
Sbjct: 145 FHEP---IVSVAAGLRHSLAVNDSGCVYQWGNGLFSH-----VDDKEMRTGDKC-----L 191
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN---QETPCLVRGEIEGER 179
+K + G H + LTE G+++ WG++ LG + TP L R + GE+
Sbjct: 192 SQKKSVLVKAGSAHCVCLTEEGELFL--WGSNKHEQLGTSESFLPSPTP-LRRSLLNGEK 248
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ + S ++A ++ G VF WG +YGQ+ TP L
Sbjct: 249 VSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDSQTPEEL 292
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLCG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 599
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T N F FG NS G G D Q + L G++I+D G H L
Sbjct: 104 IYTTQNNEVFVFGMNSSNCLGTG-----DNQSTIIPRRLDVLCGKRIVDLSYGSGPHILV 158
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G+VYS WG +G + LG+ N + P V E+ +++++++ +A++ G
Sbjct: 159 CNEDGEVYS--WGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDG 216
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S + S PR +S +V +A+G S+ + D G VY WGY
Sbjct: 217 EVFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGY 276
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G ++ L+P L H P ++ ++ T A+++ G LY WG
Sbjct: 277 NGTGQLGIGNTGNQ-----LMPCRLVFAH---PVCIIQVVLGYAHTL-ALSDQGVLYAWG 327
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N +GQLG+G +Q P+KV
Sbjct: 328 ANSHGQLGIGNKSNQTAPVKV 348
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 35/314 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G +N ++F G+NS + LG D + P L + +
Sbjct: 93 ACIFGSAANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCGK--------- 143
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G I++ + +G +++G+N + Q G G QG +L +K
Sbjct: 144 -RIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNG----NAIQGVAPVQVCMELLAKK 198
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H++ LT G+V+ G+ GQ G G NQ P V ++ + +V +++
Sbjct: 199 VIQVACGSHHSMALTSDGEVFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAG 258
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR----IVDVASGGSAC 242
+AV+D G V+ WG + GQ+ +T L C+ V I+ V G +
Sbjct: 259 QSSSMAVTDNGHVYCWGYNGTGQLGIG----NTGNQLMPCRLVFAHPVCIIQVVLGYAHT 314
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L+D+G++Y+WG +G LG G K S P + + N + +
Sbjct: 315 LALSDQGVLYAWGANSHGQLGIGNK-SNQTAPVKVGT--------NERMVEVTACHSTNI 365
Query: 300 FGAITNFGHLYMWG 313
A + G +YMWG
Sbjct: 366 SAAKSQSGQVYMWG 379
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 18/210 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV-DCVLA 192
+ ++ T++ +V+ +G + LG +NQ T R ++ G+RIV LS +L
Sbjct: 101 NEAIYTTQNNEVFV--FGMNSSNCLGTGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILV 158
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G+V+ WG++ Y Q+ + +Q P + +++ VA G L +G V
Sbjct: 159 CNEDGEVYSWGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDGEV 218
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTFGAITNFG 307
+ WGY G +G G ++S+ P + +TL +SKV S+ AG + A+T+ G
Sbjct: 219 FCWGYNNCGQVGSGTTANQSV-PRRVSATL--------QSKVVVSIAAGQSSSMAVTDNG 269
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
H+Y WG N GQLG+G +Q P ++
Sbjct: 270 HVYCWGYNGTGQLGIGNTGNQLMPCRLVFA 299
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG-GSAC 242
SA + + + +VF +G + + + Q + PR L G RIVD++ G G
Sbjct: 98 SAANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHI 156
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ N++G VYSWG Y LG G + + + P + L + KV + G
Sbjct: 157 LVCNEDGEVYSWGHNGYSQLGNGNAI-QGVAPVQVCMELLAK-------KVIQVACGSHH 208
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+T+ G ++ WG N GQ+G GT +Q P +V+ Q
Sbjct: 209 SMALTSDGEVFCWGYNNCGQVGSGTTANQSVPRRVSATLQ 248
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
Length = 1413
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 42/315 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++ CG N + QLG + P+++ T + +A G HTI +
Sbjct: 1059 TVWACGANWNGQLGDGTTINRSTPVQV------------SGLTDVIAIAGGDYHTIALKS 1106
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ + +G+NS+GQ G G + + NI + G G HT+ L G
Sbjct: 1107 DNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTNIIAIAG--------GYVHTIALKSDG 1158
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G+ GQ G G N+ TP V G + ++ ++ +A+ G V+ WG
Sbjct: 1159 TVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---VIAIAGEYVHTVALKSDGTVWAWGY 1215
Query: 205 SEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLG 260
+ YGQ+ + S STP Q G++ ++ +A G L +G V++WG+ G LG
Sbjct: 1216 NGYGQLGDGSTTNRSTPV---QVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLG 1272
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++R L P Q + + ++ G A+ + ++ WG N YGQL
Sbjct: 1273 DGTTINR-----LTPV------QVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQL 1321
Query: 321 GLGTVEDQPFPLKVA 335
G GT ++ P++V+
Sbjct: 1322 GDGTTINRLTPVQVS 1336
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 148/343 (43%), Gaps = 45/343 (13%)
Query: 4 ITDIAC--GYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+TD+ G + +A KS ++ G N QLG + P+++
Sbjct: 192 LTDVIAIAGGAYHTIALKSDGT---VWAWGNNEGGQLGDGSTTDRSTPVQV--------- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
T + +A G AHTI + + + +G+N G+ G G K ++D
Sbjct: 240 ---SGLTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVK--VGGLSD 294
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
++ G HT+ L G V++ G GQ G G N+ TP V G + ++
Sbjct: 295 -----VIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD---VI 346
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ + + G V+ WG++E GQ+ + S STP Q G++ ++ +A G
Sbjct: 347 AIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPV---QVSGLADVIAIAGGVY 403
Query: 241 ACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ +G +++WGY G LG G ++ S Q N + V ++ G
Sbjct: 404 HTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV-----------QVNGLTDVIAIAGGY 452
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
A+ + G ++ WG N YGQLG G++ ++ P + ++ G K
Sbjct: 453 YHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMK 495
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 42/314 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++ G N +SQLG P+++ T +A G HTI +
Sbjct: 611 TVWAYGANWNSQLGDGSTTDSSTPVQV------------SGLTDAIAIAGGVYHTIALKS 658
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESG 144
+ +T+G N+ GQ G G + G + A+ G D HT+ L G
Sbjct: 659 DGTVWTWGWNNSGQLGDGTTINRSTP--------VQVIGLTDVIAIAGGDYHTIALKSDG 710
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G+ GQ G G N+ TP V+G + I+ ++ +A+ G V+ WG
Sbjct: 711 TVWTWGFNYYGQLGGGATTNRSTPVQVKGLAD---IIAIAGGYVHSIALKSDGTVWAWGY 767
Query: 205 SEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLG 260
+ YGQ+ + S TP Q G++ I+ +A G L +G V++WG+ G LG
Sbjct: 768 NGYGQLGDGSTTDHLTPV---QVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLG 824
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G + S Q + + V ++ A A+ + G ++ WG+N YGQL
Sbjct: 825 DGTTTNSSTPV-----------QVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL 873
Query: 321 GLGTVEDQPFPLKV 334
G G+ ++ P++V
Sbjct: 874 GDGSTTERSLPVQV 887
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 37/277 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P TQI + G HT+ + + + +G N Q G G + ++
Sbjct: 592 PRTQI---SAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS----------TPVQVS 638
Query: 126 KIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ DA+ G HT+ L G V++ GW GQ G G N+ TP V G + ++
Sbjct: 639 GLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTD---VIA 695
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ +A+ G V+ WG + YGQ+ + STP Q KG++ I+ +A G
Sbjct: 696 IAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPV---QVKGLADIIAIAGGYVH 752
Query: 242 CTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L +G V++W GYG LG G S L P Q + + + ++ G
Sbjct: 753 SIALKSDGTVWAWGYNGYGQLGDG-----STTDHLTPV------QVSGLTDIIAIAGGYI 801
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ + G ++ WG N+ GQLG GT + P++V+
Sbjct: 802 HTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVS 838
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HTL L G V++ G +GQ G N+ TP V G + ++ ++ +
Sbjct: 150 AGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---VIAIAGGAYHTI 206
Query: 192 AVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+ G V+ WGN+E GQ+ + S STP Q G++ ++ +A G + L +G
Sbjct: 207 ALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV---QVSGLTDVIAIAGGYAHTIALKSDGT 263
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V++WG G LG G +RS IP + G S V ++ G A+ + G
Sbjct: 264 VWAWGDNEGGRLGDGSTTNRS-----IPVKVGGL------SDVIAIAGGNAHTIALKSDG 312
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG N+ GQLG G+ ++ P+KV+
Sbjct: 313 TVWAWGDNEGGQLGDGSTTNRSTPVKVS 340
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 132/311 (42%), Gaps = 38/311 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++ G N+ QLG + P++++ T + +A G HTI +
Sbjct: 661 TVWTWGWNNSGQLGDGTTINRSTPVQVI------------GLTDVIAIAGGDYHTIALKS 708
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +T+G N +GQ G G + +AD I+ G H++ L G
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQ--VKGLAD-----IIAIAGGYVHSIALKSDGT 761
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ G+ GQ G G + TP V G + I+ ++ +A+ G V+ WG++
Sbjct: 762 VWAWGYNGYGQLGDGSTTDHLTPVQVSGLTD---IIAIAGGYIHTIALKSDGTVWAWGHN 818
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
E GQ+ + S+ V Q G++ ++ V + L +G V++WG YG LG G
Sbjct: 819 EGGQLGDGTTTNSSTPV--QVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDG 876
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
RS+ +I T V ++ G A+ + G ++ WG N QLG
Sbjct: 877 STTERSLPVQVIGLT-----------DVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGN 925
Query: 323 GTVEDQPFPLK 333
+ ++ P++
Sbjct: 926 WSTKNSSTPVR 936
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HTL L G V++CG +GQ G G N+ TP V G + ++ ++ +
Sbjct: 1046 AGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---VIAIAGGDYHTI 1102
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A+ V+ WG++ YGQ+ + I+ + + ++ I+ +A G L +G V
Sbjct: 1103 ALKSDNTVWAWGSNSYGQLGDGT--ITNRSIPTPVTYLTNIIAIAGGYVHTIALKSDGTV 1160
Query: 252 YSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++W GYG LG G +RS Q + + V ++ A+ + G
Sbjct: 1161 WAWGYNGYGQLGDGSTTNRSTPV-----------QVSGLTDVIAIAGEYVHTVALKSDGT 1209
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG N YGQLG G+ ++ P++V+
Sbjct: 1210 VWAWGYNGYGQLGDGSTTNRSTPVQVS 1236
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +QI + G HT+ + + +T+G N GQ G +E + ++ L
Sbjct: 144 PRSQI---SAGAYHTLTLKPDGAVWTWGANWNGQLG-----DESTTNRSTPVQVSGL--T 193
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G HT+ L G V++ G GQ G G ++ TP V G + ++ ++
Sbjct: 194 DVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD---VIAIAG 250
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A+ G V+ WG++E G++ + S S P + G+S ++ +A G +
Sbjct: 251 GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPV---KVGGLSDVIAIAGGNAHTIA 307
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V++WG G LG G +RS P + G + V ++ G
Sbjct: 308 LKSDGTVWAWGDNEGGQLGDGSTTNRST-----PVKVSGL------ADVIAIAGGYSHTI 356
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + G ++ WG N+ GQLG G+ ++ P++V+
Sbjct: 357 VLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVS 390
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 37/262 (14%)
Query: 1 MIKITDIAC--GYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVR 58
+I +TD+ G + +A KS ++ G N QLG + P++
Sbjct: 687 VIGLTDVIAIAGGDYHTIALKSDGT---VWTWGFNYYGQLGGGATTNRSTPVQ------- 736
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
VK + I +A G H+I + + + +G N +GQ G G +
Sbjct: 737 ----VKGLA-DIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDH---------- 781
Query: 119 IADLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ ++ + D + G HT+ L G V++ G GQ G G N TP V G
Sbjct: 782 LTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLT 841
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVD 234
+ ++ +++ + +A+ G V+ WG + YGQ+ + +T R L Q G++ ++
Sbjct: 842 D---VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGS---TTERSLPVQVIGLTDVIA 895
Query: 235 VASGGSACTMLNDEGLVYSWGY 256
+A G L +G V++WGY
Sbjct: 896 IAGGYYHTIALKSDGAVWAWGY 917
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I IA GY T+ A KS ++ G N QLG + P+++
Sbjct: 1138 LTNIIAIAGGYVHTI-ALKSDGT---VWAWGYNGYGQLGDGSTTNRSTPVQV-------- 1185
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
T + +A HT+ + + + +G N +GQ G G
Sbjct: 1186 ----SGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRS----------T 1231
Query: 121 DLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
++ + D + G HT+ L G V++ GW GQ G G N+ TP V G +
Sbjct: 1232 PVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDA 1291
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+ ++ +A+ V+ WG++ YGQ+ + + + TP Q G++ + +A
Sbjct: 1292 ---IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPV---QVSGLTDAIAIA 1345
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP 271
G L + V++WG YG LG + S+ P
Sbjct: 1346 GGDYHTIALKSDNTVWAWGSNSYGQLGD-VSTANSLTP 1382
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 141/387 (36%), Gaps = 94/387 (24%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I IA GY T+ A KS ++ G N QLG P+++
Sbjct: 790 LTDIIAIAGGYIHTI-ALKSDGT---VWAWGHNEGGQLGDGTTTNSSTPVQV-------- 837
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
T + + HTI + + +T+G N +GQ G G E +
Sbjct: 838 ----SGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLP-------VQ 886
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH----------------LNN 164
+ ++ G HT+ L G V++ WG +G LG+ +N+
Sbjct: 887 VIGLTDVIAIAGGYYHTIALKSDGAVWA--WGYNGNNQLGNWSTKNSSTPVRSLRYDMNS 944
Query: 165 QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS------------- 211
TP ++ G V LSS + ++ W +YG S
Sbjct: 945 VTTPAVITGS---TTCVSLSSVLLNGWVDGNRAATTAW--FDYGTSSGVYFDTTATIPCG 999
Query: 212 ESEMQIS------TP------RVLSQ-CKGVSRIVD--------VASGGSACTMLNDEGL 250
S IS TP R+ +Q +G+S + +++G L +G
Sbjct: 1000 TSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIFLPRSQISAGAYHTLTLKPDGT 1059
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V++ G G LG G ++RS Q + + V ++ G A+ +
Sbjct: 1060 VWACGANWNGQLGDGTTINRSTPV-----------QVSGLTDVIAIAGGDYHTIALKSDN 1108
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N YGQLG GT+ ++ P V
Sbjct: 1109 TVWAWGSNSYGQLGDGTITNRSIPTPV 1135
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 31/176 (17%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ + IA GY T+ A KS ++ G N+ QLG + P+++
Sbjct: 1238 LTDVIAIAGGYVHTI-ALKSDGT---VWTWGWNNSGQLGDGTTINRLTPVQV-------- 1285
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
T +A G HTI + + + +G+NS+GQ G G + +
Sbjct: 1286 ----SGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTT----------INRLT 1331
Query: 121 DLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP--CLV 171
++ + DA+ G HT+ L V++ G + GQ G N TP CL+
Sbjct: 1332 PVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLTPAQCLL 1387
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 145/320 (45%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ AC +G N ++F G N LG D + P RI +
Sbjct: 27 LRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPR-------RIDV 79
Query: 62 PVKHPSTQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G H ++ T + + +G+N + Q G G G
Sbjct: 80 LC---GKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTN----HGLTPALVST 132
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +++ + CG HT+ LT G+VY+ G+ GQ G G NQ TP V ++ + +
Sbjct: 133 NLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV 192
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV D G+++GWG + GQ+ + TP ++ +GV+ IV VA G
Sbjct: 193 VNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVN-IVQVACGY 251
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ L DEG VY+WG YG LG G K ++++ PT I + K ++ + A
Sbjct: 252 AHTLALTDEGFVYAWGANSYGQLGTGNKSNQAL-PTPINT---------DKERIVEVAAC 301
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T G + MWG+
Sbjct: 302 HTSHTSAAKTQSGQVLMWGQ 321
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 13/262 (4%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +T N+ F G N G G G D Q I L G+KI+ G H +
Sbjct: 44 LYVTVNDEVFALGTNCSGCLGLG-----DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVI 98
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+VY+ G Q G G N+ TP LV + +R+ +++ +A++ G+V
Sbjct: 99 ATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEV 158
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
+ WG + GQ+ S S TPR +S C +V++A G + D G +Y WGY
Sbjct: 159 YAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNC 218
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + + T P + N + + G A+T+ G +Y WG N YG
Sbjct: 219 NGQLGLGNNGNQQT--PCRIAALQGVN----IVQVACGYAHTLALTDEGFVYAWGANSYG 272
Query: 319 QLGLGTVEDQPFPLKVAVGGQK 340
QLG G +Q P + ++
Sbjct: 273 QLGTGNKSNQALPTPINTDKER 294
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW + E +++ C + L++T + +V++ G G GLG L +
Sbjct: 14 GKWPVFALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIE 73
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++IV LS + V+A +D G+V+ WG++ Y Q+ TP ++S
Sbjct: 74 PRRI-DVLCGKKIVSLSYGTGPHVVIATAD-GEVYAWGHNGYSQLGNGTTNHGLTPALVS 131
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
R+ +VA G L +G VY+WGY GQ S + +PT P + Q
Sbjct: 132 TNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPT--PRRVSSCLQ- 188
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y WG N GQLGLG +Q P ++A
Sbjct: 189 --NKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIA 237
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLCG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 37/335 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG T+ ++S+++ L+ G +LG+ GN +L+ IP P
Sbjct: 66 QIDSIACGADHTLAYSESRNE---LYSWGWGDFGRLGH------GNSSDLL-----IPQP 111
Query: 63 V-KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 112 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQK-----IQT 166
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G I G +H++ +TE+G++Y GWG G GLG N++ P V ++ +++V
Sbjct: 167 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS-SVDCDKMV 225
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
++ ++VS G ++ +G S+YGQ+ + S P+ L +++ SGG
Sbjct: 226 MVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALS--DKLISQVSGGW 283
Query: 241 ACTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+M L GL+Y WG+ GQ G V R P Q +F KV + G
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGDNVDR-CSPV--------QVKFPHDQKVVQISCG 334
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG G D+ P
Sbjct: 335 WRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +++ ++ G +HT+ + ++G GQ G G D + +++ L+ +
Sbjct: 11 PPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-----DTDDRLLPTHLSALDAQ 65
Query: 126 KIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I CG DHTL +ES ++YS GWG G+ G G+ ++ P + ++G RI +++
Sbjct: 66 QIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIA 124
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ +G+V WG ++ GQ+ + S P+ + +GV I VA+G
Sbjct: 125 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVP-IKMVAAGAEHSV 183
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ + G +Y WG YG LG G + R + P + S + ++ C +
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDRNDRWI-PEKVSSV-----------DCDKMVMVACGW 231
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++++ G LY +G ++YGQLG G ED P K+
Sbjct: 232 RHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKL 268
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGA- 89
G D QLG+ D + P L + QI +A G HT+ +++
Sbjct: 38 GRGEDGQLGHGDTDDRLLPTHLS----------ALDAQQIDSIACGADHTLAYSESRNEL 87
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + I L+G +I CG H L +T G+V S
Sbjct: 88 YSWGWGDFGRLGHG-----NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSW 142
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ +G I +++ + +A+++ G+++GWG YG
Sbjct: 143 GRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGN 201
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S ++V VA G ++ G +Y++G YG LG G
Sbjct: 202 LGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG--- 257
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ + +L+P L Q + + G A+T+ G LY WG N++GQ+G+G
Sbjct: 258 --NFEDSLVPQKL----QALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDN 311
Query: 326 EDQPFPLKV 334
D+ P++V
Sbjct: 312 VDRCSPVQV 320
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+++ G HT+ L V S G G DGQ G G +++ P + ++ ++I ++
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSA-LDAQQIDSIAC 72
Query: 186 AVDCVLAVSD-KGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
D LA S+ + +++ WG ++G++ + S++ I P + Q RI +A G S
Sbjct: 73 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL---RIKQIACGDSH 129
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
C + EG V SWG G LG G + + +L+P + Q ++ + AG
Sbjct: 130 CLAVTMEGEVQSWGRNQNGQLGLG-----TSEDSLVPQKI----QTFQGVPIKMVAAGAE 180
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AIT G LY WG +YG LGLG D+ P KV+
Sbjct: 181 HSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ T+ + L+ G + QLG+ + P +L ++
Sbjct: 223 KMVMVACGWRHTISVSSLG----GLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKL--- 275
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIA 120
I ++ G H++ +T + +G N FGQ G G + + Q K F H+
Sbjct: 276 -------ISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVK-FPHD-- 325
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+K++ CG HT+ +TE V+S G G +GQ G G ++ +P ++
Sbjct: 326 ----QKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 26/255 (10%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G QG +L +++
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K + + P H K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 84 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G++F WG + GQ+ S S TPR ++ C R+V++A G ++ + D G VY
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHGMC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G+ + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP + + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q+ TP ++ G+ + + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMC-VNQIVCGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 297
Query: 301 -GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 128/258 (49%), Gaps = 23/258 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G H+ V+T++ + FG+N +GQ G G + F + L+ EK+ C
Sbjct: 43 MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKS--LNKPSF---VKPLKPEKVRKVAC 97
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG---ERIVKLSSAVDC 189
G++HT+ +ESGK++S G DGQ LGH++ + L+ EIE I +++
Sbjct: 98 GRNHTIVYSESGKLFSFGCNEDGQ--LGHVDKENE--LLPKEIESIPQMEIKQIACGTYH 153
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+ +S+ GDV+ WGN+ GQ+ E++ S P+ L K +V V+ G ++ +
Sbjct: 154 SIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKL---KFKKEVVSVSCGYYHTALVTRD 210
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE--SLIAGPCTFGAITNF 306
G +Y++G LG+ S + T +P ++ P E S+ G AIT
Sbjct: 211 GFLYTFGENELGKLGLSSSQLSNTTVPQSVAM-----PADNDEYISVSCGARHTVAITKQ 265
Query: 307 GHLYMWGKNQYGQLGLGT 324
GH Y WG GQLG GT
Sbjct: 266 GHCYAWGDGSQGQLGHGT 283
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG T+V ++S KLF G N D QLG+ D K N L +P
Sbjct: 91 KVRKVACGRNHTIVYSESG----KLFSFGCNEDGQLGHVD---KENEL--------LPKE 135
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ P +IK +A G H+I+++++ + +GNN+ GQ G G E K
Sbjct: 136 IESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKF----- 190
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL--GHLNNQETPCLVRGEIEGER 179
++++ CG HT +T G +Y+ G G+ GL L+N P V + +
Sbjct: 191 --KKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDE 248
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQCKGVSRIVDVAS 237
+ +S +A++ +G + WG+ GQ+ ++++ P+ + + G + + V+
Sbjct: 249 YISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSG-QKCISVSC 307
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGP-KVSRSMKPTLI 274
G S ++ + G V+++G +G LGQG S S P +
Sbjct: 308 GESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYL 348
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 115 FCHNIAD---LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
F NIA+ ++ + +++ CG +H+ +TESG++Y G GQ GLGH + P V
Sbjct: 25 FADNIANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFV 84
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCK 227
+ ++ E++ K++ + + S+ G +F +G +E GQ+ E+E+ + Q +
Sbjct: 85 KP-LKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQME 143
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
I +A G +L+++G VY WG G LG G +V S+ L +F
Sbjct: 144 ----IKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKL---------KF 190
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT--VEDQPFPLKVAV 336
K +V S+ G +T G LY +G+N+ G+LGL + + + P VA+
Sbjct: 191 --KKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAM 242
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 37/335 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG T+ ++S+++ L+ G +LG+ GN +L+ IP P
Sbjct: 66 QIDSIACGADHTLAYSESRNE---LYSWGWGDFGRLGH------GNSSDLL-----IPQP 111
Query: 63 V-KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 112 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQK-----IQT 166
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G I G +H++ +TE+G++Y GWG G GLG N++ P V ++ +++V
Sbjct: 167 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS-SVDCDKMV 225
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
++ ++VS G ++ +G S+YGQ+ + S P+ L +++ SGG
Sbjct: 226 MVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALS--DKLISQVSGGW 283
Query: 241 ACTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+M L GL+Y WG+ GQ G V R P Q +F KV + G
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGDNVDR-CSPV--------QVKFPHDQKVVQISCG 334
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG G D+ P
Sbjct: 335 WRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +++ ++ G +HT+ + ++G GQ G G D + +++ L+ +
Sbjct: 11 PPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-----DTDDRLLPTHLSALDAQ 65
Query: 126 KIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I CG DHTL +ES ++YS GWG G+ G G+ ++ P + ++G RI +++
Sbjct: 66 QIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIA 124
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ +G+V WG ++ GQ+ + S P+ + +GV I VA+G
Sbjct: 125 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVP-IKMVAAGAEHSV 183
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ + G +Y WG YG LG G + R + P + S + ++ C +
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDRNDRWI-PEKVSSV-----------DCDKMVMVACGW 231
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++++ G LY +G ++YGQLG G ED P K+
Sbjct: 232 RHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKL 268
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 139/309 (44%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGA- 89
G D QLG+ D + P L + QI +A G HT+ +++
Sbjct: 38 GRGEDGQLGHGDTDDRLLPTHLS----------ALDAQQIDSIACGADHTLAYSESRNEL 87
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + I L+G +I CG H L +T G+V S
Sbjct: 88 YSWGWGDFGRLGHG-----NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSW 142
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ +G I +++ + +A+++ G+++GWG YG
Sbjct: 143 GRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGN 201
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S ++V VA G ++ G +Y++G YG LG G
Sbjct: 202 LGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG--- 257
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ + +L+P L Q + + G A+T+ G LY WG N++GQ+G+G
Sbjct: 258 --NFEDSLVPQKL----QALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDN 311
Query: 326 EDQPFPLKV 334
D+ P++V
Sbjct: 312 VDRCSPVQV 320
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+++ G HT+ L V S G G DGQ G G +++ P + ++ ++I ++
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSA-LDAQQIDSIAC 72
Query: 186 AVDCVLAVSD-KGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
D LA S+ + +++ WG ++G++ + S++ I P + Q RI +A G S
Sbjct: 73 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL---RIKQIACGDSH 129
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
C + EG V SWG G LG G + + +L+P + Q ++ + AG
Sbjct: 130 CLAVTMEGEVQSWGRNQNGQLGLG-----TSEDSLVPQKI----QTFQGVPIKMVAAGAE 180
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AIT G LY WG +YG LGLG D+ P KV+
Sbjct: 181 HSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ T+ + L+ G + QLG+ + P +L ++
Sbjct: 223 KMVMVACGWRHTISVSSLG----GLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKL--- 275
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIA 120
I ++ G H++ +T + +G N FGQ G G + + Q K F H+
Sbjct: 276 -------ISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVK-FPHD-- 325
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+K++ CG HT+ +TE V+S G G +GQ G G ++ +P ++
Sbjct: 326 ----QKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH ++ P V G ++ + IV +S LA++DKG V+ WG +
Sbjct: 57 TCGCNDLGQ--LGHEKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E + PR + + +IV VA G L+ V+SWG YG LG G
Sbjct: 114 GQLGLPGTEECVRVPRNIRSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P +I S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 YEYKKQTSPQMIKSLLGIPFAQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDDNDRYVP 233
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G ++ ++ L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP-------EHVGALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G DGQ GL G P +R E + IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQ-IVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ +A+GG+
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS-PQMIKSLLGIP-FAQIAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG R + PTL+ S KV + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDDNDRYV-PTLLKSL--------RSQKVVHICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + P ++ +R
Sbjct: 190 IPFAQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDDNDRYVPT--LLKSLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S ++ H+ G HT +T G FTFG +GQ G E K F +
Sbjct: 241 -----SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLCG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 61 TSANEAIYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 115
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 116 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 175
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G++F WG + GQ+ S S TPR ++ C R+V++A G ++ + D G VY
Sbjct: 176 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 235
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 236 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHGMC----VNQIVCGYAHTLALTDEGLL 286
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G+ + P ++ V ++
Sbjct: 287 YAWGANTYGQLGTGSKNNLLSPTQIMVEKER 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 56 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 106
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 107 -KIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 161
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 162 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACG 221
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q+ TP ++ G+ + + G +
Sbjct: 222 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMC-VNQIVCGYAHTLA 279
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 280 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 329
Query: 301 -GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 330 SAAKTQGGHVYMWGQ 344
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + ++I D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLN-------KRIRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH ++ P V G ++ + IV +S LA++DKG V+ WG +
Sbjct: 57 TCGCNDLGQ--LGHEKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV VA G L+ V+SWG YG LG G
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P +I S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDDNDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I+ + G HT+ + D+ +T G N GQ G ++ ++ L+ +
Sbjct: 33 NKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP-------EHVGALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G DGQ GL G P ++ E + IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQ-IVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ E + Q ++P V+ G+ +A+GG+
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ-NSPHVIKSLLGIP-FAQIAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG R + PTL+ S KV + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDDNDRYV-PTLLKSL--------RTQKVVHICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ CG TV ++ CG N QLG+ RK+ + +
Sbjct: 35 RIRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKARKRPEHVGAL--------- 81
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
+ I ++ G AHT+ + D + +G + GQ G +E C N
Sbjct: 82 ---DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEE--------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEG 177
I L +I+ CG H+L L++ +V+S G GQ GLG+ Q +P +++ + G
Sbjct: 131 IKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
++++ ++ G +FGWG +++GQ+ ++ L + ++V +
Sbjct: 190 IPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICC 249
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE---SLI 294
G L EG V+++G G GQ S S H+ NP+ E SL+
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPRKVFELMGSLV 296
Query: 295 AGPC-----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG GT ++ P V
Sbjct: 297 TQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFAQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDDNDR-----------YVPT 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ + H+ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 24/272 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L + IVIT+++ ++ G+N G G G D + L + I+
Sbjct: 28 LGSAGNEAIVITNDDEVYSLGSNCSGCLGLG----SDAMSGLEPRKVEQLCKKNIVSFAY 83
Query: 133 GQ-DHTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H L T +G+VYS WG +G Q G G N TP V + G+RI ++
Sbjct: 84 GSGPHVLATTNAGEVYS--WGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHH 141
Query: 190 VLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+A+S +G++F WG + GQ+ S + TPR ++ C G + + +A G ++ D
Sbjct: 142 SMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDT 201
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIP-STLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G V+ WGY G LG G +++ L+ + +F + + G +T
Sbjct: 202 GEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNVF----------ITQIACGYAHTLGLT 251
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ G LY WG N YGQLG G + P+++AV
Sbjct: 252 DEGSLYAWGANSYGQLGTGNKANMISPVRIAV 283
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 18/251 (7%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
I A G ++ T N G +++G+N + Q G G QG + L G++I
Sbjct: 77 NIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTN----QGPTPTPVTSSLLGKRI 132
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG H++ L+ G++++ G GQ G G +NQ TP V I ++ + ++
Sbjct: 133 TAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQ 192
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A D G+VFGWG + GQ+ + + P L V I +A G + L
Sbjct: 193 TSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNV-FITQIACGYAHTLGLT 251
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
DEG +Y+WG YG LG G K + + P I L G+ + L A A+
Sbjct: 252 DEGSLYAWGANSYGQLGTGNKANM-ISPVRIAVDL-GRFVEIAATHYNHLSA------AL 303
Query: 304 TNFGHLYMWGK 314
T G ++MWG+
Sbjct: 304 TQAGKVFMWGQ 314
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 24/257 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
I A G G V+AT + + ++ G N QLG + P + S +
Sbjct: 77 NIVSFAYGSGPHVLATTNAGE---VYSWGHNGYCQLGNGSTNQGPTPTPVTSSLL----- 128
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+I +A G H++ ++ F +G N+ GQ G G + K A +
Sbjct: 129 ----GKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRK----VTACI 180
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+K + CGQ ++ ++G+V+ G+ +GQ GLG+ NQ PC + + I +
Sbjct: 181 GSKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLV-VLNNVFITQ 239
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-- 238
++ L ++D+G ++ WG + YGQ+ IS R+ + R V++A+
Sbjct: 240 IACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPVRIAVD---LGRFVEIAATHY 296
Query: 239 GSACTMLNDEGLVYSWG 255
L G V+ WG
Sbjct: 297 NHLSAALTQAGKVFMWG 313
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYG--QISESEMQISTPRVLSQ-CKGVSRIVDVASG- 238
L SA + + +++ +V+ G++ G + M PR + Q CK IV A G
Sbjct: 28 LGSAGNEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCK--KNIVSFAYGS 85
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G + G VYSWG Y LG G ++ PT + S+L G+ ++ ++
Sbjct: 86 GPHVLATTNAGEVYSWGHNGYCQLGNG-STNQGPTPTPVTSSLLGK-------RITAIAC 137
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA--VGGQK 340
G A+++ G ++ WG+N GQ+G GT +QP P KV +G +K
Sbjct: 138 GSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKK 184
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + ++I D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLN-------KRIRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH ++ P V G ++ + IV +S LA++DKG V+ WG +
Sbjct: 57 TCGCNDLGQ--LGHEKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV VA G L+ V+SWG YG LG G
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P +I S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDDNDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I+ + G HT+ + D+ +T G N GQ G ++ ++ L+ +
Sbjct: 33 NKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP-------EHVGALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G DGQ GL G P ++ E + IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQ-IVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ E + Q ++P V+ G+ +A+GG+
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ-NSPHVIKSLLGIP-FAQIAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG R + PTL+ S KV + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDDNDRYV-PTLLKSL--------RTQKVVHICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ CG TV ++ CG N QLG+ RK+ + +
Sbjct: 35 RIRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKARKRPEHVGAL--------- 81
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
+ I ++ G AHT+ + D + +G + GQ G +E C N
Sbjct: 82 ---DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEE--------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEG 177
I L +I+ CG H+L L++ +V+S G GQ GLG+ Q +P +++ + G
Sbjct: 131 IKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
++++ ++ G +FGWG +++GQ+ ++ L + ++V +
Sbjct: 190 IPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICC 249
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE---SLI 294
G L EG V+++G G GQ S S H+ NP+ E SL+
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPRKVFELMGSLV 296
Query: 295 AGPC-----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG GT ++ P V
Sbjct: 297 TQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFAQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDDNDR-----------YVPT 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ + H+ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 84 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G++F WG + GQ+ S S TPR ++ C R+V++A G ++ + D G VY
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHGMC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G+ + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q+ TP ++ G+ + + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMC-VNQIVCGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 297
Query: 301 -GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV +A G L+ V+SWG +G LG G
Sbjct: 114 GQLGLPGTEEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
++ R P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 FELKRQSSPQLIKSLLGIPFTQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRFVP 233
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G ++ GQ G +E + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG L Q +P L++ + G
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL-GIPFT 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I T +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFTQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRFVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L G V++ GW GQ G G N+ P V+G + +V +++ + +
Sbjct: 233 AGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISD---VVAIAAGMYHTV 289
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A+ + G V+ WG++E+ Q+ + Q KG+S + +A+G S +L ++G V
Sbjct: 290 ALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDGTV 349
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WG YG LG G + S P Q N S V+++ AG + N G
Sbjct: 350 WAWGVNEYGKLGDGT-TNNSFTPV----------QVNGISNVKAIAAGAYHTVVLKNDGT 398
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N YG+LG GT D P++V
Sbjct: 399 VWTWGYNHYGELGNGTTVDSSTPVQV 424
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 32/272 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G HT+ + ++ + +G N GQ G G + I+D ++
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQ--VKGISD-----VVA 280
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSS 185
G HT+ L G V++ WG + LG+ +E TP V+G I + + +
Sbjct: 281 IAAGMYHTVALKNDGTVWA--WGDNEHDQLGNETTKEEYHSTPVQVKG-ISDVKAIAAGA 337
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+ VL + G V+ WG +EYG++ + S V Q G+S + +A+G +L
Sbjct: 338 SYTVVL--KNDGTVWAWGVNEYGKLGDGTTNNSFTPV--QVNGISNVKAIAAGAYHTVVL 393
Query: 246 NDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
++G V++WGY G LG G V S Q S V+++ AG C A
Sbjct: 394 KNDGTVWTWGYNHYGELGNGTTVDSSTPV-----------QVKGISDVKAIAAGACHTVA 442
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ N G ++ WG N YG+LG GT D P++V
Sbjct: 443 LKNDGTVWAWGCNYYGELGNGTAVDSSTPVQV 474
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G L ++G V++WG+ G LG G +R+ IP + G S V
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRT-----IPVQVKGI------SDVV 279
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
++ AG A+ N G ++ WG N++ QLG T +++ V V G
Sbjct: 280 AIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKG 326
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IA G +TVV ++ G+N +LG P+++ +
Sbjct: 333 IAAGASYTVVLKNDG----TVWAWGVNEYGKLGDGTTNNSFTPVQV------------NG 376
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +K +A G HT+V+ ++ +T+G N +G+ G G + + I+D++
Sbjct: 377 ISNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQ--VKGISDVKA-- 432
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
I C HT+ L G V++ G G+ G G + TP V+
Sbjct: 433 IAAGAC---HTVALKNDGTVWAWGCNYYGELGNGTAVDSSTPVQVK 475
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 84 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G++F WG + GQ+ S S TPR ++ C R+V++A G ++ + D G VY
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHGMC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G+ + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q+ TP ++ G+ + + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMC-VNQIVCGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 297
Query: 301 -GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH- 65
+ CG T T D+ ++L+ G +LG+ GN S V P P++
Sbjct: 78 VICGADHT---TAYSDEQMQLYSWGWGDFGRLGH------GNS-----SDVFHPQPIEAL 123
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+IK +A G +H + +TD ++G N GQ G G ++ K I EG
Sbjct: 124 QGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQK-----IHAFEGV 178
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ G +HT + E G +Y GWG G GLG N++ P V +EGE++V ++
Sbjct: 179 CVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVS-SVEGEKMVLVAC 237
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM 244
+ VS GD++ +G S+YGQ+ + + P L K R + +GG TM
Sbjct: 238 GWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALK--DRFISQIAGGWRHTM 295
Query: 245 -LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+ +G +Y WG+ GQ V+ ++ +F Q KV + G A+
Sbjct: 296 AVAGDGKLYGWGWNKFGQ-VGVADNVDHCSPVQVIFPDEQ-----KVAQVACGWRHTLAL 349
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T +++ WG+ GQLG G + D+ P
Sbjct: 350 TENKNVFSWGRGTSGQLGHGEIIDRNTP 377
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 32/310 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P+ ++S +P + G HT +D +
Sbjct: 45 GRGEDGQLGHGDAEDR--PVPTLLSGFDVP-------GIASVVICGADHTTAYSDEQMQL 95
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L+G KI CG H L +T++G+V+S
Sbjct: 96 YSWGWGDFGRLGHG-----NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSW 150
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P + EG + +++ + A+ + GD++GWG +YG
Sbjct: 151 GRNQNGQLGLGNTEDSLLPQKIHA-FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGN 209
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S +G ++V VA G ++ G +Y++G YG LG G
Sbjct: 210 LGLGDRNDRLVPEKVSSVEG-EKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHG--- 265
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-AITNFGHLYMWGKNQYGQLGLGT 324
+ L+P L K + S IAG A+ G LY WG N++GQ+G+
Sbjct: 266 --DFEDHLVPHKLEAL-----KDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVAD 318
Query: 325 VEDQPFPLKV 334
D P++V
Sbjct: 319 NVDHCSPVQV 328
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI IACG + T + ++ G N + QLG + P + + +F +
Sbjct: 126 IKIKQIACGDSHCLAVTDAG----QVHSWGRNQNGQLGLGNTEDSLLP-QKIHAFEGVC- 179
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT I ++ + +G +G G G D + ++
Sbjct: 180 --------VKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLG-----DRNDRLVPEKVSS 226
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EGEK++ CG HT+ ++ SG +Y+ GW GQ G G + P + ++ I
Sbjct: 227 VEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDRFIS 285
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ +AV+ G ++GWG +++GQ+ ++ V ++ VA G
Sbjct: 286 QIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRH 345
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
L + V+SWG G LG G + R+ P +I
Sbjct: 346 TLALTENKNVFSWGRGTSGQLGHGEIIDRNT-PKMI 380
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 26/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G H++ + ++ ++G GQ G G ++ ++ +
Sbjct: 18 PEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASV 77
Query: 126 KIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+CG DH T + E ++YS GWG G+ G G+ ++ P + ++G +I +++
Sbjct: 78 ----VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEA-LQGIKIKQIA 132
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+D G V WG ++ GQ+ + S P+ + +GV + +A+G
Sbjct: 133 CGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVC-VKMIAAGAEHTA 191
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ ++G +Y WG YG LG G + R L+P + + E ++ C +
Sbjct: 192 AILEDGDLYGWGWGQYGNLGLGDRNDR-----LVPEKV-------SSVEGEKMVLVACGW 239
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G ED P K+
Sbjct: 240 RHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKL 276
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCV 190
G +H++ L S V S G G DGQ G G ++ P L+ G ++ G V + A
Sbjct: 27 AGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTT 86
Query: 191 LAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
++ ++ WG ++G++ + + P+ + +G+ +I +A G S C + D G
Sbjct: 87 AYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGI-KIKQIACGDSHCLAVTDAG 145
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG G LG G + + +L+P + H F V+ + AG AI
Sbjct: 146 QVHSWGRNQNGQLGLG-----NTEDSLLPQKI---HAFEGVC-VKMIAAGAEHTAAILED 196
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG QYG LGLG D+ P KV +V G+K
Sbjct: 197 GDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 164 NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRV 222
++E P E + + +S+ + +A+ V WG E GQ+ + + P +
Sbjct: 11 DEEVP-----EAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTL 65
Query: 223 LS--QCKGVSRIVDVASGGSACTMLNDEGL-VYSWG---YGLLGQGPKVSRSMKPTLIPS 276
LS G++ +V G T +DE + +YSWG +G LG G S P I +
Sbjct: 66 LSGFDVPGIASVV--ICGADHTTAYSDEQMQLYSWGWGDFGRLGHG-NSSDVFHPQPIEA 122
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L G K++ + G A+T+ G ++ WG+NQ GQLGLG ED P K+
Sbjct: 123 -LQG-------IKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKI 172
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + ++I D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLN-------KRIRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH ++ P V G ++ + IV +S LA++DKG V+ WG +
Sbjct: 57 TCGCNDLGQ--LGHEKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV VA G L+ V+SWG YG LG G
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P +I S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDDNDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I+ + G HT+ + D+ +T G N GQ G ++ ++ L+ + I+
Sbjct: 35 RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP-------EHVGALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G DGQ GL G P ++ E + IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQ-IVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q ++P V+ G+ +A+GG+ +
Sbjct: 147 YHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ-NSPHVIKSLLGIP-FAQIAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG R + PTL+ S KV + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDDNDRYV-PTLLKSL--------RTQKVVHICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ CG TV ++ CG N QLG+ RK+ + +
Sbjct: 35 RIRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKARKRPEHVGAL--------- 81
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
+ I ++ G AHT+ + D + +G + GQ G +E C N
Sbjct: 82 ---DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEE--------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEG 177
I L +I+ CG H+L L++ +V+S G GQ GLG+ Q +P +++ + G
Sbjct: 131 IKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
++++ ++ G +FGWG +++GQ+ ++ L + ++V +
Sbjct: 190 IPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICC 249
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE---SLI 294
G L EG V+++G G GQ S S H+ NP+ E SL+
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPRKVFELMGSLV 296
Query: 295 AGPC-----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG GT ++ P V
Sbjct: 297 TQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFAQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDDNDR-----------YVPT 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ + H+ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 152/338 (44%), Gaps = 38/338 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG+ T+V N ++ CG N QLG +K LE V +
Sbjct: 87 VREVACGHKHTLVLLA----NGSVYSCGANDFGQLGQDRSMRK---LEQVAAL------- 132
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +I+ +A G AH++ ++D F++G N GQ G G +E + K I L
Sbjct: 133 --SAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKV----IKKLA 186
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIV 181
I+ CG H L L +G+++S G A GQ GLG N+ P V + G +
Sbjct: 187 TLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLA 245
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGS 240
++ + ++ G VF WG + GQ+ S+ + P VL + RI V G +
Sbjct: 246 LVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGEN 304
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V+++G YG LG G KV+ ++ ++ L G + + L G
Sbjct: 305 HTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV--ELMG-------TAISQLSCGR 355
Query: 298 C-TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C T G LY++G GQLG GT+E P+ V
Sbjct: 356 CHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTV 393
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 62 PVKHP-------STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
PV P + ++ +A G HT+V+ N ++ G N FGQ G+ + Q
Sbjct: 72 PVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--- 128
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+A L +I CG+ H+L L+++G+V+S G +GQ G G V +
Sbjct: 129 ----VAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKK 184
Query: 175 IEGERIVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVS 230
+ IV+++ AV C LA+++ G++F WG + GQ+ +S PR +S GV
Sbjct: 185 LATLHIVQIACGAVHC-LALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVP 243
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ VA G L G V+ WG G LG + R + PT++ L Q
Sbjct: 244 -LALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDR-LHPTVL-KPLRSQ------ 294
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ + G A+T G ++ +G YGQLG G ++ P +V
Sbjct: 295 -RIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRV 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +ACG +V T S +F G NS QLG D R + +P L
Sbjct: 242 VPLALVACGAMHSVGLTPSG----TVFVWGRNSCGQLGLSDQRDRLHPTVLK-------- 289
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P++ S +IKH+ G HT +T + G FTFG ++GQ G G+ E + + +
Sbjct: 290 PLR--SQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRR-----VVE 342
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G I CG+ HT+ + +SG++Y G G GQ G G L + P V G
Sbjct: 343 LMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 395
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TD++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDDDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLSGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLSG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV +A G L+ V+SWG +G LG G
Sbjct: 114 GQLGLPGTEEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
++ R P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 FELKRQSSPQLIKSLLGIPFTQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRFVP 233
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G ++ GQ G + E+Y NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG--LPGTEEYIR--VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG L Q +P L++ + G
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL-GIPFT 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I T +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFTQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRFVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 142/320 (44%), Gaps = 32/320 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ AC +G +N ++F G N LG D + P L +
Sbjct: 18 LKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGK--- 74
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I L+ G +V+ EG +T+G+N++ Q G G C
Sbjct: 75 -------KITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLP----CQIST 123
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L +K+ + CG H++ LT G+VY+ G+ GQ G G NQ P V ++ +
Sbjct: 124 NLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIA 183
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGG 239
V ++ C +AV + G+V+ WG + GQ+ TP ++ +G+ R+ VA G
Sbjct: 184 VNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGI-RVQRVACGY 242
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA- 295
+ +L DEG +Y+WG YG LG G +RS + +P T+ K +V + A
Sbjct: 243 AHTLVLTDEGQMYAWGANSYGQLGTG---NRSNQSYPVPITV-------DKDRVIEIAAC 292
Query: 296 -GPCTFGAITNFGHLYMWGK 314
T A T +YMWG+
Sbjct: 293 HSAHTSAAKTQGSQVYMWGQ 312
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 13/262 (4%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +T+N F G N G G G D Q + L G+KI G H +
Sbjct: 35 LYVTENNEVFALGTNCSGCLGVG-----DTQNSVEPRRLDTLCGKKITCLSYGSGPHVVV 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+VY+ G A Q G G NN PC + + +++ +++ + ++ G+V
Sbjct: 90 ATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
+ WG + GQ+ S S + PR ++ C V++A G + + G VY WGY
Sbjct: 150 YTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNG 209
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 210 NGQLGLGNSGNQPT--PCRIAALQGI----RVQRVACGYAHTLVLTDEGQMYAWGANSYG 263
Query: 319 QLGLGTVEDQPFPLKVAVGGQK 340
QLG G +Q +P+ + V +
Sbjct: 264 QLGTGNRSNQSYPVPITVDKDR 285
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 18/255 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT + T N F FG+N++GQ G G + K C I L+ EK+ C
Sbjct: 85 LSCGDEHTAITTGNNKLFMFGSNNWGQLGLG---SKATVNKPTC--IKALKPEKVKFVAC 139
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL LT G+VY+ G +GQ GLG + + L+ +I +LS+ + A
Sbjct: 140 GRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAA 199
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLV 251
++ +G+++ +G E G++ + +V G+S +++ VA GG +L ++ V
Sbjct: 200 LTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-V 258
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y++G +G LG G + +P +I S K+ + G IT G
Sbjct: 259 YTFGLGQFGQLGLGTFTFETSEPKVIESV--------KDKKISHVCCGENHTALITESGL 310
Query: 309 LYMWGKNQYGQLGLG 323
LY +G ++G+LGLG
Sbjct: 311 LYTFGDGRHGKLGLG 325
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 12 GFTVVATKSKDKNLKLFGCGLNSDSQL---------GYHDPRKKGNPLELVMSFVRIPLP 62
F +++ + +K G N+ + L G + K G P +L+++ ++P
Sbjct: 174 AFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNH-KVPQL 232
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V S ++ +A G HT+V+T+ + +TFG FGQ G G E + K I +
Sbjct: 233 VPGISEKVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFTFETSEPKV----IESV 287
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+ +KI CG++HT +TESG +Y+ G G G+ GLG N NQ P L
Sbjct: 288 KDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTL 337
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 32/281 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KLF G N+ QLG P + ++ P K
Sbjct: 85 LSCGDEHTAITTG----NNKLFMFGSNNWGQLGLGSKATVNKP-----TCIKALKPEK-- 133
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K +A GR HT+++T + G N+ GQ G G D + H I+ +
Sbjct: 134 ---VKFVACGRNHTLILTGGGQVYATGGNNEGQLGLG-----DTDERSAFHLISFFTSQH 185
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIVKL 183
KI G + + LT G++Y+ G G+ GL L N + P LV G E+++++
Sbjct: 186 KIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPG--ISEKVIQV 243
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ + +++K V+ +G ++GQ + + S P+V+ K +I V G +
Sbjct: 244 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKD-KKISHVCCGENH 301
Query: 242 CTMLNDEGLVYSWG---YGLLGQG-PKVSRSMKPTLIPSTL 278
++ + GL+Y++G +G LG G + PTL S L
Sbjct: 302 TALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFL 342
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 37/251 (14%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFL 140
++ D+ FTFG F E+ K WF +I + CG +HT
Sbjct: 52 MVPDSGAVFTFGKTKFA---------ENMPSKFWFKRDIP-------ISLSCGDEHTAIT 95
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T + K++ G GQ GLG P ++ ++ E++ ++ + L ++ G V+
Sbjct: 96 TGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKA-LKPEKVKFVACGRNHTLILTGGGQVY 154
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
G + GQ+ + + S ++S +I +++G + L EG +Y++G
Sbjct: 155 ATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPES 214
Query: 257 GLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG--AITNFGHLYMWG 313
G LG PK+ + K P L+P E +I C G + +Y +G
Sbjct: 215 GKLGLPPKLLVNHKVPQLVPGI------------SEKVIQVACGGGHTVVLTEKAVYTFG 262
Query: 314 KNQYGQLGLGT 324
Q+GQLGLGT
Sbjct: 263 LGQFGQLGLGT 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG T++ T +++ G N++ QLG D ++ + L+ F
Sbjct: 133 KVKFVACGRNHTLILTGGG----QVYATGGNNEGQLGLGDTDER-SAFHLISFFTS---- 183
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+H +IK L+ G + +T +TFG G+ G +++ I+
Sbjct: 184 -QH---KIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGIS-- 237
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG HT+ LTE VY+ G G GQ GLG + + V ++ ++I
Sbjct: 238 --EKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISH 294
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+ + +++ G ++ +G+ +G++ + V + C + + VA GG
Sbjct: 295 VCCGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGG- 353
Query: 241 ACTML 245
C ML
Sbjct: 354 -CHML 357
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 28/268 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE-----DYQGK-WFCHNIADL 122
I L++G H+IV TD +G F++G + GQ G ++ E +Y K F N +D
Sbjct: 131 NIISLSSGYEHSIVTTD-KGLFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKN-SDS 188
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERI 180
I G DH+L L + G VYS G G G TGLG +N TP ++ E+E + +
Sbjct: 189 TFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLV 248
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS---TPRVLSQCKGVSRIVDVAS 237
+ ++ L ++ +++ +G EYGQ+ SE +P+ + ++I V +
Sbjct: 249 LDIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFA 308
Query: 238 GGSACTMLNDE-GLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G A + DE G VYSWG+G LG G + +P+ Q S ++ +
Sbjct: 309 GSHATSFYVDEKGDVYSWGWGEGGTLGFGDN-----QNVYVPT------QVKSLSNIKKI 357
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLG 321
AG A+TN +Y++G N +GQLG
Sbjct: 358 AAGFKHTLALTNDNQVYVFGDNTFGQLG 385
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++ GY ++V T DK L F G + QL + + + ++ +++ P +
Sbjct: 132 IISLSSGYEHSIVTT---DKGL--FSWGRSDKGQLANGELKSE---IKDQINYSSKPQFI 183
Query: 64 KHPST---QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K+ + IK + +G H++V+ + +++G+ FG G G ++++
Sbjct: 184 KNSDSTFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLG--KKDNVATPTKIQFNK 241
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+LE + ++D CG H+L LT ++YS GWG GQ LGH N +IE
Sbjct: 242 ELENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQ--LGHSENDTKNYYSPKKIES--- 296
Query: 181 VKLSSAVDCVLA--------VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI 232
+ S+ + V A V +KGDV+ WG E G + + Q V +Q K +S I
Sbjct: 297 INSSTKIKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQ--NVYVPTQVKSLSNI 354
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+A+G L ++ VY +G GQ
Sbjct: 355 KKIAAGFKHTLALTNDNQVYVFGDNTFGQ 383
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 17/229 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL--------NNQETPCL 170
I L+ I+ G +H++ T+ G ++S G GQ G L N P
Sbjct: 124 IETLKNRNIISLSSGYEHSIVTTDKG-LFSWGRSDKGQLANGELKSEIKDQINYSSKPQF 182
Query: 171 VRGEIEGER-IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKG 228
++ R I K+ S D L ++ G V+ WG+ +G + ++TP + K
Sbjct: 183 IKNSDSTFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNKE 242
Query: 229 VSR--IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+ ++D+A GG +L + +YS+G+G GQ K P + N
Sbjct: 243 LENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKI---ESINS 299
Query: 287 KSKVESLIAGP-CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+K++S+ AG T + G +Y WG + G LG G ++ P +V
Sbjct: 300 STKIKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVPTQV 348
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
V +P VK S IK +A G HT+ +T++ + FG+N+FGQ G
Sbjct: 342 VYVPTQVKSLS-NIKKIAAGFKHTLALTNDNQVYVFGDNTFGQLG 385
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE---IEG 177
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNG 350
Query: 178 ERIVKL-SSAVDCVLAVSDKGD 198
+R+ + S CV + GD
Sbjct: 351 QRLPDIDSEEYFCVKRIFSGGD 372
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV +A G L+ V+SWG +G LG G
Sbjct: 114 GQLGLPGTEEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
++ R P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 FELKRQSSPQLIKSLLGIPFTQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRFVP 233
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G ++ GQ G +E + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR----NIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG L Q +P L++ + G
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL-GIPFT 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I T +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFTQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRFVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|379721973|ref|YP_005314104.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
gi|378570645|gb|AFC30955.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
Length = 337
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 30/280 (10%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE----DYQGKWF 115
P+PVK+ + I A G A V +D A+ +G+N FGQ G G + QG
Sbjct: 22 PIPVKNLDSVIGISAGGAASFAVRSDGT-AWAWGSNLFGQLGDGTTYDRLTPVQVQG--- 77
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
H++ LE G H+L + G V++ GW GQ G G +++ TP V+
Sbjct: 78 LHSVVALE--------AGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQAL- 128
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
+ +V +++ LAV G V+ WG + GQ+ + ST V Q G+ +V V
Sbjct: 129 --DSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPV--QVTGLGSVVSV 184
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
++G + + L +G V++WG GQ G + + S P+ + T SL
Sbjct: 185 SAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSDYSL- 243
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ N G ++ WG N GQLG GT P++V
Sbjct: 244 -------ALKNDGTVWAWGYNSSGQLGNGTTTSSSAPVQV 276
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C V R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H + V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPMRVAALH----RVCVNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLNPEHIMVEKER 285
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIV--DVASGGSAC 242
+AV D G+V+GWG + GQ + + Q++ RV + R+ + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPMRV----AALHRVCVNQIVCGYAHT 245
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L DEGL+Y+WG YG LG G K + + P +H K +V + A T
Sbjct: 246 LALTDEGLLYAWGANTYGQLGTGNK-NNLLNP---------EHIMVEKERVVEIAACHST 295
Query: 300 F--GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 296 HISAAKTQGGHVYMWGQ 312
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + +A+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQIAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV V+ G L+ V+SWG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV++S
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVSCG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+S G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE---IEG 177
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNG 350
Query: 178 ERIVKL-SSAVDCVLAVSDKGD 198
+R+ + S CV + GD
Sbjct: 351 QRLPDIDSEEYFCVKRIFSGGD 372
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE---IEG 177
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNG 350
Query: 178 ERIVKL-SSAVDCVLAVSDKGD 198
+R+ + S CV + GD
Sbjct: 351 QRLPDIDSEEYFCVKRIFSGGD 372
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 152/338 (44%), Gaps = 38/338 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG+ T+V N ++ CG N QLG +K LE V +
Sbjct: 93 VREVACGHKHTLVLLA----NGSVYSCGANDFGQLGQDRSMRK---LEQVAAL------- 138
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +I+ +A G AH++ ++D F++G N GQ G G +E + K I L
Sbjct: 139 --SAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKV----IKKLA 192
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIV 181
I+ CG H L L +G+++S G A GQ GLG N+ P V + G +
Sbjct: 193 TLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLA 251
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGS 240
++ + ++ G VF WG + GQ+ S+ + P VL + RI V G +
Sbjct: 252 LVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGEN 310
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V+++G YG LG G KV+ ++ ++ L G + + L G
Sbjct: 311 HTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV--ELMG-------TAISQLSCGR 361
Query: 298 C-TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C T G LY++G GQLG GT+E P+ V
Sbjct: 362 CHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTV 399
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 62 PVKHP-------STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
PV P + ++ +A G HT+V+ N ++ G N FGQ G+ + Q
Sbjct: 78 PVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--- 134
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+A L +I CG+ H+L L+++G+V+S G +GQ G G V +
Sbjct: 135 ----VAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKK 190
Query: 175 IEGERIVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVS 230
+ IV+++ AV C LA+++ G++F WG + GQ+ +S PR +S GV
Sbjct: 191 LATLHIVQIACGAVHC-LALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVP 249
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ VA G L G V+ WG G LG + R + PT++ L Q
Sbjct: 250 -LALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDR-LHPTVL-KPLRSQ------ 300
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ + G A+T G ++ +G YGQLG G ++ P +V
Sbjct: 301 -RIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRV 346
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +ACG +V T S +F G NS QLG D R + +P L
Sbjct: 248 VPLALVACGAMHSVGLTPSG----TVFVWGRNSCGQLGLSDQRDRLHPTVLK-------- 295
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P++ S +IKH+ G HT +T + G FTFG ++GQ G G+ E + + +
Sbjct: 296 PLR--SQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRR-----VVE 348
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G I CG+ HT+ + +SG++Y G G GQ G G L + P V G
Sbjct: 349 LMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 401
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 34/333 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG T+ ++SK ++++ G +LG+ GN +L IP P
Sbjct: 68 QIVSVVCGADHTLAYSESK---VEVYSWGWGDFGRLGH------GNSSDLF-----IPQP 113
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 114 IRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQK-----IQT 168
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G I G +H++ +TE+G++Y GWG G GLG N++ P V ++ +++V
Sbjct: 169 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKV--SVDCDKMV 226
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G+++ +G S+YGQ+ + + Q I V+ G
Sbjct: 227 LVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRH 286
Query: 242 CTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L G +Y WG+ GQ G V R P Q +F KV + G
Sbjct: 287 TMALTTGGQLYGWGWNKFGQVGVGDNVDR-CSPV--------QVKFPHDQKVAQISCGWR 337
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T ++Y WG+ GQLG+G D +P
Sbjct: 338 HTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYP 370
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 28/277 (10%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ ++ G +H++ + ++G GQ G G D + ++ L+ +
Sbjct: 13 PPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHG-----DTDDRLLPTQLSALDAQ 67
Query: 126 KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I+ VCG DHTL +ES +VYS GWG G+ G G+ ++ P +R ++G RI +++
Sbjct: 68 QIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRA-LQGLRIKQIA 126
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ +G+V WG ++ GQ+ + S P+ + +GV I VA+G
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVP-IKMVAAGAEHSV 185
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ + G +Y WG YG LG G + R IP + + ++ C +
Sbjct: 186 AITENGELYGWGWGRYGNLGLGDRNDR-----CIPEKV--------SVDCDKMVLVACGW 232
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++++ G LY +G ++YGQLG G +D P K+
Sbjct: 233 RHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKL 269
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 16/217 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G +++ P + ++ ++IV +
Sbjct: 15 RRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSA-LDAQQIVSVV 73
Query: 185 SAVDCVLAVSD-KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D LA S+ K +V+ WG ++G++ + + P+ + +G+ RI +A G S C
Sbjct: 74 CGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGL-RIKQIACGDSHC 132
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + + +L+P + Q ++ + AG
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLG-----TTEDSLVPQKI----QTFQGVPIKMVAAGAEH 183
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
AIT G LY WG +YG LGLG D+ P KV+V
Sbjct: 184 SVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV 220
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG+ T+ + S + L+ G + QLG+ D + P +L ++
Sbjct: 224 KMVLVACGWRHTISVSSSGE----LYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKL--- 276
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIA 120
I ++ G HT+ +T + +G N FGQ G G + + Q K F H+
Sbjct: 277 -------ICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVK-FPHD-- 326
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+K+ CG HT+ +TE VYS G G +GQ G+G + P ++
Sbjct: 327 ----QKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIE 374
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLIPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +I+ VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +I++++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIIQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 119/269 (44%), Gaps = 19/269 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
T + + +TD++ F FG N G G D Q + L G+KI
Sbjct: 27 FGTSASEALYVTDDDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLSGKKIKSLSY 81
Query: 133 GQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H L TE G VY+ G Q G G N P V + +++V+++ +
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY WGY G LG G ++ L P + H V ++ G A+T+ G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSV----CVNQIVCGYAHTLALTDEG 252
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
LY WG N YGQLG G + P + V
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLSG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 120/273 (43%), Gaps = 19/273 (6%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
T + +TDN+ F FG N G G D Q + L G+KI
Sbjct: 27 FGTSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSY 81
Query: 133 GQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H L TE G VY+ G Q G G N P V + +++V+++ +
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY WGY G LG G ++ L P + H V ++ G A+T+ G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSV----CVNQIVCGYAHTLALTDEG 252
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
LY WG N YGQLG G + P + V ++
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 38/323 (11%)
Query: 3 KITDI--ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+IT I AC +G + N ++F GLN + LG D + P +L +
Sbjct: 17 EITSIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK-- 74
Query: 61 LPVKHPSTQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+IK L+ G H ++ T++ + +G+N + Q G G QG
Sbjct: 75 --------KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVC 122
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+L +++++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R
Sbjct: 123 TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKR 182
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVA 236
+V ++ +AV D G+V+GWG + GQ + + Q++ RV + V++IV
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV--- 239
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G + L DEGL+Y+WG YG LG G K + + P H K +V +
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEI 289
Query: 294 IA--GPCTFGAITNFGHLYMWGK 314
A T A T GH+YMWG+
Sbjct: 290 AACHSAHTSAAKTQGGHVYMWGQ 312
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 119/269 (44%), Gaps = 19/269 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
T + + +TD++ F FG N G G D Q + L G+KI
Sbjct: 27 FGTSASEALYVTDDDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLSGKKIKSLSY 81
Query: 133 GQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H L TE G VY+ G Q G G N P V + +++V+++ +
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY WGY G LG G ++ L P + H V ++ G A+T+ G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSV----CVNQIVCGYAHTLALTDEG 252
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
LY WG N YGQLG G + P + V
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLSG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 43/345 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG TV T+ + + G ++ QLG GN + +P VK
Sbjct: 75 VACGGHHTVAVTEDGE----VVSWGWGNEGQLG------SGNAFDQT-----VPAVVKAL 119
Query: 67 ST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
S ++ +A G HT V+TD +G + GQ G+G D+ ++ L E
Sbjct: 120 SNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQG-----DWTSSLLPRTVSTLYNE 174
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ----ETPCLVRGEIEGERIV 181
KI CG HTL L+ +G++YS G GADGQ G+G + TP VR + E E+
Sbjct: 175 KIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVD-EEEKFE 233
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ +A++D +F WG G++ +SE + S P V+ + RI VA+GG
Sbjct: 234 FIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFS-PTVVRRSIENLRICYVAAGG 292
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGP-------KVSRSMKPTLIPSTLFGQHQFNPKSK 289
+L+D G +++ G YG LG G K +R+++ + L Q K
Sbjct: 293 HHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCL---LLHIVQLRDKKI 349
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ T I+ G ++ WG + GQLG G E P+++
Sbjct: 350 IKAACGDTHTL-VISTAGEVFAWGAAEDGQLGTGGTEGANSPVEL 393
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 29/272 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGC-GLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++ +ACGY T V T ++ L C G + QLG D P + +
Sbjct: 123 RVCGVACGYYHTAVVT-----DVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLY----- 172
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +I+ +A G AHT+ ++ N +++G + GQ G G QEE D
Sbjct: 173 -----NEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVD 227
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
E EK CG H + +T+ +++S G GADG+ GLG ++ +P +VR IE RI
Sbjct: 228 EE-EKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRIC 286
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQ-CKGV------- 229
+++ +SD G++F G YGQ+ ++ ++ + R L C +
Sbjct: 287 YVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRD 346
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+I+ A G + +++ G V++WG GQ
Sbjct: 347 KKIIKAACGDTHTLVISTAGEVFAWGAAEDGQ 378
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 24/272 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
++A G HT+ +T++ ++G + GQ G G ++ + L ++
Sbjct: 74 YVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAV-----VKALSNHRVCGVA 128
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG HT +T+ G V G G GQ G G + P V + E+I +++ + L
Sbjct: 129 CGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTV-STLYNEKIRQIACGMAHTL 187
Query: 192 AVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A+S G+++ WG GQ+ E ++TP+ + + + +A G C +
Sbjct: 188 ALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKV-RVDEEEKFEFIACGSRHCMAIT 246
Query: 247 DEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
D+ ++SWG G LG G SR PT++ ++ ++ + AG +
Sbjct: 247 DDCRLFSWGLGADGRLGLGDSESR-FSPTVVRRSI-------ENLRICYVAAGGHHTAVL 298
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ G ++ G+ YGQLG G + Q LK A
Sbjct: 299 SDNGEIFTCGRGSYGQLGHGDADPQ-LTLKKA 329
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K IACG + T + +LF GL +D +LG D + +P + S +
Sbjct: 231 KFEFIACGSRHCMAITD----DCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENL--- 283
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQGKWFCH--- 117
+I ++A G HT V++DN FT G S+GQ G G Q + + H
Sbjct: 284 ------RICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCL 337
Query: 118 --NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+I L +KI+ A CG HTL ++ +G+V++ G DGQ G G +P
Sbjct: 338 LLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSP 390
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 27/313 (8%)
Query: 25 LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
+ ++ G D QLG D + +P+ LV + Q ++ G HT+V+T
Sbjct: 1 MTVYTWGRGEDGQLGLGDTSDQYHPI-LVEAL---------QDRQTVQISCGSGHTVVLT 50
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
D+ +T+G G+ G G D K+ + DL +K+ CG HT +T SG
Sbjct: 51 DDGKVYTWGRGDDGRLGHG-----DNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSG 105
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++Y+ G G G+ G G+ N TP LV I+G + +++ + + + DV+ WG+
Sbjct: 106 ELYTWGGGMYGKLGHGNENGHSTPSLVE-SIKGLYVRQVACGSRHTVVLLENQDVYTWGD 164
Query: 205 SEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ- 261
E G + +P +S+ ++ I +++ G L++ G V+++G G G+
Sbjct: 165 KENGVSGHGDTSGHQYSPYCVSELVEIN-IKQISACGFHTAALSENGQVFTFGEGKFGRL 223
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G R+ L G+ +++ + G A+T GH++ WG ++GQLG
Sbjct: 224 GHNSERNQPVAKCIDALIGK-------RIKQVACGGFHTAAVTESGHVFTWGGGEHGQLG 276
Query: 322 LGTVEDQPFPLKV 334
G +Q P +V
Sbjct: 277 HGDKVNQIIPTRV 289
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +ACG TVV +++D ++ G + G+ D V V I
Sbjct: 138 LYVRQVACGSRHTVVLLENQD----VYTWGDKENGVSGHGDTSGHQYSPYCVSELVEI-- 191
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
IK ++ HT +++N FTFG FG+ G E Q C I
Sbjct: 192 -------NIKQISACGFHTAALSENGQVFTFGEGKFGRLGH---NSERNQPVAKC--IDA 239
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G++I CG HT +TESG V++ G G GQ G G NQ P V I+ + I+
Sbjct: 240 LIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID-KNII 298
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+L+ +A++DKG+VF WGN ++G++ ++ T L + R++ VAS
Sbjct: 299 QLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVAS 354
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 33/319 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CG G TVV T K++ G D +LG+ D K P R+ ++
Sbjct: 39 ISCGSGHTVVLTDDG----KVYTWGRGDDGRLGHGDNGWKFVP--------RLVEDLR-- 84
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+++ + G HT +T + +T+G +G+ G G + G + ++G
Sbjct: 85 DKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHG-----NENGHSTPSLVESIKGLY 139
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ CG HT+ L E+ VY+ G +G +G G + + E+ I ++S+
Sbjct: 140 VRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISAC 199
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A+S+ G VF +G ++G++ SE + + G RI VA GG +
Sbjct: 200 GFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIG-KRIKQVACGGFHTAAV 258
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ G V++WG +G LG G KV++ + PT + S + + L G A
Sbjct: 259 TESGHVFTWGGGEHGQLGHGDKVNQII-PTRVESLI--------DKNIIQLTCGWSHTVA 309
Query: 303 ITNFGHLYMWGKNQYGQLG 321
+T+ G ++ WG +G+LG
Sbjct: 310 LTDKGEVFTWGNGDHGKLG 328
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ + CG T T S + L +G G+ +LG+ + P LV S
Sbjct: 87 KVRQVTCGSYHTAAVTVSGE--LYTWGGGMYG--KLGHGNENGHSTP-SLVESI------ 135
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ +A G HT+V+ +N+ +T+G+ G G G Y + + ++
Sbjct: 136 ---KGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYS-PYCVSELVEI 191
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
++I + CG HT L+E+G+V++ G G G+ G NQ + I G+RI +
Sbjct: 192 NIKQI--SACGF-HTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALI-GKRIKQ 247
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGS 240
++ AV++ G VF WG E+GQ+ + QI RV S I+ + G S
Sbjct: 248 VACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID--KNIIQLTCGWS 305
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
L D+G V++WG +G LG ++ +P LI +
Sbjct: 306 HTVALTDKGEVFTWGNGDHGKLGHND-TNKVTEPKLIET 343
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 28/249 (11%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+SWG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
++ P LI S L G P +V AG +T G ++ WG+N++GQLGL
Sbjct: 173 IDCNKQASPQLIKS-LTGI----PFMQVA---AGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 323 GTVEDQPFP 331
D+ P
Sbjct: 225 NDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + Q ++P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQ-ASPQLIKSLTGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 149/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+S G GQ GLG N Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKS-LTGIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
Length = 1019
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 152/338 (44%), Gaps = 49/338 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T + CG TV TK K++ G N D QLG R +G SF P+
Sbjct: 43 VTSVTCGEQHTVFLTKDG----KMWSVGSNMDGQLG-RGSRTEG-------SFSIYPVSW 90
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S +I ++ GR+HT+ +TD+ F +G+N GQ G E + + + ++
Sbjct: 91 T-SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG----MESKFTWQGTPRRVQEI- 144
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE----IEGER 179
I+ G +H + L E G+V+ G ADG+ C+ R E + G
Sbjct: 145 -NDIVQVASGSNHCIALDEGGRVFVWGEQADGR------------CIHRPEPVEQLSGVP 191
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASG 238
IV++ + LA+S G VF WG + G++ +++ T + + Q G+ +V+ A G
Sbjct: 192 IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACG 250
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+ +L G +S+G LGQ G KV + PT + S L G H V + A
Sbjct: 251 DNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAV-SDLIGSH-------VTRIAA 302
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
G C AI G Y +G N GQLG G + Q P K
Sbjct: 303 GACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRK 339
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D++G + CG+ HT+FLT+ GK++S G DGQ G G +I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKI 96
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQIS-TPRVLSQCKGVSRIVDVASG 238
+++S+ ++V+D G VF WG++E+GQ+ ES+ TPR + + ++ IV VASG
Sbjct: 97 IQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPR---RVQEINDIVQVASG 153
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+ C L++ G V+ WG G+ P+ + I L G A
Sbjct: 154 SNHCIALDEGGRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAG--------------A 199
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
C A++ G ++ WG+N G+LG+ + Q
Sbjct: 200 RHCL--ALSASGAVFTWGQNNSGELGIDDLRPQ 230
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 57 VRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+ P PV+ S I + G H + ++ + FT+G N+ G+ G +D + +
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGI-----DDLRPQTS 232
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
++ ++G +++A CG +HT+ LT G+ +S G A GQ G G + T ++
Sbjct: 233 VQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDL 292
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS 230
G + ++++ +A+ KG + +G + GQ+ + M STPR + V+
Sbjct: 293 IGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKTDELDHVT 347
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 32/314 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L
Sbjct: 23 ACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLE----------SLSG 72
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I+ L+ G H ++ T++ + +G+N + Q G G QG +L +K
Sbjct: 73 KRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTN----QGVTPIQVCTNLLIKK 128
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H+L L+ G VY+ G+ GQ G G NQ TP V ++ + +V ++
Sbjct: 129 VIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACG 188
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A+ D G+V+GWG + GQ + + Q+ TP ++ +GV I+ +A G +
Sbjct: 189 QTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALQGVC-IMQIACGYAHTLA 246
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-SLIAGPCTF 300
L DEGL+YSWG YG LG G K S + P GQ + VE + T
Sbjct: 247 LTDEGLMYSWGANTYGQLGTGNK-SNQLSP--------GQILMEKERVVEIAACHSAHTS 297
Query: 301 GAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 298 AAKTQSGLVYMWGQ 311
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I IT N+ F FG N G G D Q + L G++I G
Sbjct: 28 TSANEAIYITHNDEVFVFGLNCSNCLGTG-----DNQSTIVPKKLESLSGKRIRSLSYGS 82
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + TE G+VY+ G Q G G N TP V + +++++++ LA+
Sbjct: 83 GPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLAL 142
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S GDV+ WG + GQ+ S S TPR +S C +V +A G ++ + D G VY
Sbjct: 143 SSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVY 202
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G + P + + + + G A+T+ G +
Sbjct: 203 GWGYNGNGQLGLGNN-GNQLTPCRVAAL--------QGVCIMQIACGYAHTLALTDEGLM 253
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q P ++ + ++
Sbjct: 254 YSWGANTYGQLGTGNKSNQLSPGQILMEKER 284
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + +A+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQIAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + +A+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQIAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + +A+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQIAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + +A+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQIAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + +A+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQIAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IA G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQIAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +I+ VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +I++++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 152/339 (44%), Gaps = 35/339 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ + CG T ++S +++ G +LG+ GN +L F P+
Sbjct: 69 EVVSVTCGADHTTAYSESF---TQVYSWGWGDFGRLGH------GNSSDL---FTPQPIK 116
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T + ++G N GQ G G ++ K I
Sbjct: 117 ALH-GLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQK-----IQAF 170
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G + G +HT +TE G++Y GWG G GLG N++ P V +EG ++VK
Sbjct: 171 QGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS-TVEGVKMVK 229
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ + + TP L + ++ SGG
Sbjct: 230 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQ--ENLISEISGGWR 287
Query: 242 CTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
TM L +G +Y WG+ GQ G V P Q +F + KV + G
Sbjct: 288 HTMALTSDGKLYGWGWNKFGQVGVGDNVDH-CSPV--------QVKFPHEQKVVHISCGW 338
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T +++ WG+ GQLG G D+ P + V
Sbjct: 339 RHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEV 377
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 31/282 (10%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + ++G GQ G G D + + ++ L
Sbjct: 11 VSAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHG-----DAEDRLSPTYLSAL 65
Query: 123 EGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +++ CG DHT +ES +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 66 DGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKA-LHGLRIK 124
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ G+V WG ++ GQ+ + S P+ + +GVS + VA+G
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVS-VKMVAAGAE 183
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE--SLIA 295
+ ++G +Y WG YG LG G + R L+P + S VE ++
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDR-----LVPEKV---------STVEGVKMVK 229
Query: 296 GPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C + ++++ G LY +G ++YGQLG G ED P K+
Sbjct: 230 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKL 271
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN-EGA 89
G D QLG+ D + +P L ++ + G HT +++
Sbjct: 41 GRGEDGQLGHGDAEDRLSPTYLSAL----------DGHEVVSVTCGADHTTAYSESFTQV 90
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L G +I CG H L +T G+V S
Sbjct: 91 YSWGWGDFGRLGHG-----NSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSW 145
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ +G + +++ + AV++ G+++GWG YG
Sbjct: 146 GRNQNGQLGLGTTEDSLVPQKIQA-FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGN 204
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S +GV ++V VA G ++ G +Y++G YG LG G
Sbjct: 205 LGLGDRNDRLVPEKVSTVEGV-KMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG--- 260
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L P L + ++ + + G A+T+ G LY WG N++GQ+G+G
Sbjct: 261 --DFEDHLTPHKL----EALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDN 314
Query: 326 EDQPFPLKV 334
D P++V
Sbjct: 315 VDHCSPVQV 323
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I IACG + T D ++ +G N + QLG P + + +F +
Sbjct: 121 LRIKQIACGDSHCLAVTM--DGEVQSWG--RNQNGQLGLGTTEDSLVP-QKIQAFQGV-- 173
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D + ++
Sbjct: 174 -------SVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG-----DRNDRLVPEKVST 221
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EG K++ CG HT+ ++ SG +Y+ GW GQ G G + TP + ++ I
Sbjct: 222 VEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLIS 280
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + V + ++V ++ G
Sbjct: 281 EISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRH 340
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
+ + V+SWG G LG G + R++ P +I
Sbjct: 341 TLAVTERQNVFSWGRGTNGQLGHGESIDRNI-PKMI 375
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G ++ +P + ++G +V ++
Sbjct: 16 RRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSA-LDGHEVVSVT 74
Query: 185 SAVDCVLAVSDK-GDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D A S+ V+ WG ++G++ + + TP+ + G+ RI +A G S C
Sbjct: 75 CGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGL-RIKQIACGDSHC 133
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +G V SWG G LG G + + +L+P + Q V+ + AG
Sbjct: 134 LAVTMDGEVQSWGRNQNGQLGLG-----TTEDSLVPQKI----QAFQGVSVKMVAAGAEH 184
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T G LY WG +YG LGLG D+ P KV+
Sbjct: 185 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVST 221
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 27/334 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ IACG T+ K ++ CG N QLG+ P K+ ++ +
Sbjct: 44 VEVVHIACGLQHTLFVKKDG----RVLSCGNNDYGQLGHEKPCKRPALIDSL-------- 91
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++G H+ V+TD FT+G+N Q GRG V +AD
Sbjct: 92 ----GERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLAD 147
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
K++ CG HT+ LT +G++Y+ G GQ GL + Q P V I G IV
Sbjct: 148 ---HKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSC-ISGLPIV 203
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++++ D L ++ G +F WG + +GQ+ + Q L + I +A G
Sbjct: 204 RVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDH 263
Query: 242 CTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L +G V+++G G+ GQ G S + L+P +F + S + +
Sbjct: 264 SLALTRDGGVFTFGAGMYGQLGHNTSNN---ELLPRKVF---ELMGSSVTQIACGRKHSI 317
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G +Y++G GQLG G+ ++ P V
Sbjct: 318 AYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ ++ H+A G HT+ + + + GNN +GQ G ++ + D GE+
Sbjct: 43 NVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLG--------HEKPCKRPALIDSLGER 94
Query: 127 -IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKL 183
++ A G H+ LT++G+V++ G D Q G G +++ T P +VRG + ++V++
Sbjct: 95 NVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQV 153
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ + ++ G ++ WG++ +GQ+ ++ + P+ +S G+ IV VA+G
Sbjct: 154 ACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLP-IVRVAAGADHN 212
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G +++WG +G LG G R PTL+ TL Q + +L G
Sbjct: 213 LVLTISGALFAWGCNSFGQLGVGDDQDRG-APTLV-KTLRNQ-------GICALACGDDH 263
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG T ++ P KV
Sbjct: 264 SLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKV 298
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 7 IACGYGFTVVATKS-KDKNL------KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRI 59
++C G +V + D NL LF G NS QLG D + +G P
Sbjct: 194 VSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTL-------- 245
Query: 60 PLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
VK Q I LA G H++ +T + G FTFG +GQ G E K F
Sbjct: 246 ---VKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVF--- 299
Query: 119 IADLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ H++ ++ SG+VY G G +GQ G G N+ +P +V+G
Sbjct: 300 --ELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKG 353
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 146/338 (43%), Gaps = 38/338 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IA G G+ + K+ ++ G NS QLG + +P VR+ P
Sbjct: 59 IAAGGGYHSLVVKNDGT---VWAWGDNSSGQLGIGTNKASLSP-------VRVMHKSGAP 108
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +A G H++ +T +T+G+NS GQ G G E K +I E
Sbjct: 109 LNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVK--VRHIRTNPLEN 166
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I+ A CG H+L + G V++ G +DGQ G G L N++ P V R K +
Sbjct: 167 IVGAACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVM------RFGKPLAG 220
Query: 187 VDCV-------LAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVA 236
V V LA+S G V+ WG++E+GQ+ S+ + + + S + + +V +A
Sbjct: 221 VKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIA 280
Query: 237 SGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G + L +G V++W G G LG GP P + + P V ++
Sbjct: 281 AGRAFSLALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAA-----NGVPLKGVRAI 335
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV--EDQP 329
A A+ N G + WG GQLG G ED P
Sbjct: 336 TANGRHSLALMNDGSVLAWGAGDRGQLGQGAQNHEDHP 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV--RGEIEGERIVKLSSAV 187
A G H+L + G V++ G + GQ G+G +P V + ++K+++
Sbjct: 60 AAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGE 119
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISES---EMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ KG+V+ WG++ GQ+ + E + + + IV A GG
Sbjct: 120 RHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLA 179
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ +G V++WG G +G G +R ++ FG+ P + V+++ AG
Sbjct: 180 VASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVM---RFGK----PLAGVKAVAAGFAHSL 232
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A++ G ++ WG N++GQLG + D+ P++V
Sbjct: 233 ALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQV 265
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +I+ VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +I++++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIIQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +I+ VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +I++++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIIQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 32/314 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + +++ GLN + LG D + P ++ + R + + + S
Sbjct: 39 ACVFGTSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGS 98
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
H ++ T++ F +G+N + Q G G QG A+L +K+
Sbjct: 99 G---------PHILLATEDGELFAWGHNGYSQLGNGTTN----QGVAPVLVSANLLNKKV 145
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H++ LT+SG+VY+ G+ GQ G G NQ TP V ++ V +
Sbjct: 146 TEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQ 205
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LAV D G+V+GWG + GQ + + Q+ TP L +G+ + + SG + L
Sbjct: 206 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRLVALQGLC-VQQIVSGYAHSLAL 263
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF-- 300
DEGL+Y+WG YG LG G K S + P I K ++ + A T
Sbjct: 264 TDEGLLYAWGANTYGQLGTGNK-SNQLSPVQI---------MTEKERIVEIAACHSTHTS 313
Query: 301 GAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 314 AAKTQSGQVYMWGQ 327
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I IT ++ + G N G G D Q + L G K++ G
Sbjct: 44 TSANEAIYITADDEVYALGLNCSNCLGTG-----DSQSSIVPKKVDILSGRKVVSLSYGS 98
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G++++ G Q G G N P LV + +++ +++ +A+
Sbjct: 99 GPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMAL 158
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+D G+V+ WG + GQ+ S S TPR +S C V + G ++ + D G VY
Sbjct: 159 TDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVY 218
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P L V+ +++G A+T+ G L
Sbjct: 219 GWGYNGNGQLGLGNNGNQ-----LTPCRLVALQGL----CVQQIVSGYAHSLALTDEGLL 269
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q P+++ ++
Sbjct: 270 YAWGANTYGQLGTGNKSNQLSPVQIMTEKER 300
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+T++ACG ++ T S + ++ G N+ Q+G + P V S ++ +
Sbjct: 144 KVTEVACGSHHSMALTDSGE----VYAWGYNNCGQVGSGSTANQPTP-RRVSSCLQNRVA 198
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + G+ ++ + DN + +G N GQ G G + C +A L
Sbjct: 199 VS--------IVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG----NNGNQLTPCRLVA-L 245
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G + V G H+L LT+ G +Y+ G GQ G G+ +NQ +P V+ E ERIV+
Sbjct: 246 QGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSP--VQIMTEKERIVE 303
Query: 183 LSS--AVDCVLAVSDKGDVFGWG 203
+++ + A + G V+ WG
Sbjct: 304 IAACHSTHTSAAKTQSGQVYMWG 326
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +I+ VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +I++++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +I+ VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +I++++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFAN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VYS G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL--LGSEEYIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D +++G +S GQ G ++ E+Y NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG--LLGSEEYIR--VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 VACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q ++P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ-ASPQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RTQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 21/315 (6%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G N + LG+ K N E S V+ VK I A G H + + D
Sbjct: 58 KLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVK-----IVQAAIGGWHCLAVDD 112
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--GEKIM--DAVCGQDHTLFLT 141
A+ +G N +GQCG + +D G+ +I + K++ G H++ LT
Sbjct: 113 QGRAYAWGGNEYGQCGE-EPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLT 171
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V++ WG G + P V+G +E R++ + + + LA+ + G ++
Sbjct: 172 REGHVWT--WGQPWPPG--DIKQISVPVRVQG-LENVRLIAVGAFHN--LALQEDGTLWA 224
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
WGN+EYGQ+ + Q + + Q +VD+A+GG T L DEG VY WG G G+
Sbjct: 225 WGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGR 284
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + Q + + G A+T GH++ +G+ +G+LG
Sbjct: 285 LGFGDSDKSSKMVPQKV----QLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLG 340
Query: 322 LGTVEDQPFPLKVAV 336
G P++V +
Sbjct: 341 YGRKVTTGQPMEVPI 355
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 35/260 (13%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E++ W C + L+ +I V G ++L + + GK+++
Sbjct: 8 IAWGSGEDGQLGIGSNEEKE----WVCL-VKALQPHRIRSVVAGSRNSLAIADDGKLFTW 62
Query: 150 GWGADGQTGLGHL-------NNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
GW + + LGH + TP V+ + +IV+ + LAV D+G + W
Sbjct: 63 GW--NQRATLGHPAETKSENKTENTPSQVKA-LSSVKIVQAAIGGWHCLAVDDQGRAYAW 119
Query: 203 GNSEYGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G +EYGQ E E + T R L +C + VA+GG+ +L EG V++W
Sbjct: 120 GGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTW 179
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G P +K +P + G V + G A+ G L+ WG
Sbjct: 180 GQ------PWPPGDIKQISVPVRVQG------LENVRLIAVGAFHNLALQEDGTLWAWGN 227
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
N+YGQLG G + + P++V
Sbjct: 228 NEYGQLGTGDTQPRSQPIRV 247
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG-- 203
+ + G G DGQ G+G +E CLV+ ++ RI + + LA++D G +F WG
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKA-LQPHRIRSVVAGSRNSLAIADDGKLFTWGWN 65
Query: 204 -NSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG---YG 257
+ G +E++ + T SQ K +S +IV A GG C ++D+G Y+WG YG
Sbjct: 66 QRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 125
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G+ P+ L Q + PK V + AG +T GH++ WG+
Sbjct: 126 QCGEEPERKDGTGRPLRRDIEIPQ-RCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ 181
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 122/280 (43%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V +++ +A G AHT +T + G + +G+N FGQ G G + +
Sbjct: 205 PVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAA-----V 259
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L + G +T LT SG V+ G GQ G G N+ TP V G G
Sbjct: 260 GGLP-SGVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSGVT 318
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ A C L + G V+ WG ++ GQ+ + S STP +S S + +A+G
Sbjct: 319 AIAAGGAHTCAL--TSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLP--SGVTAIAAG 374
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G+ G V+ WG YG LG G RS P + G S V ++ A
Sbjct: 375 GAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRS-----TPGAVSGL-----PSGVTAIAA 424
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T ++ WG N YGQLG GT ++ P V+
Sbjct: 425 GNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVS 464
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 115/282 (40%), Gaps = 24/282 (8%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
P V + + +A G HT +T + G + +G N GQ G G G
Sbjct: 458 STPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGA---- 513
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L + G HT L SG V+ G GQ G G + TP V G G
Sbjct: 514 -VGGLP-SGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG 571
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+ + C L SD V+ WG + GQ+ + + STP +S S + +A
Sbjct: 572 VMAIAAGNYHTCALTGSDG--VWCWGTNSDGQLGDGTTTNRSTPVAVSGLP--SGVTAIA 627
Query: 237 SGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G L G V+ WGY L LG G +RS P + G S V ++
Sbjct: 628 AGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST-----PGAVSGL-----PSGVTAI 677
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AG A+T G ++ WG N YGQLG GT ++ P V+
Sbjct: 678 AAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVS 719
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 140/341 (41%), Gaps = 45/341 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T IA G +T T S ++ G N QLG + P V
Sbjct: 266 VTAIAAGGRYTCALTSSG----GVWCWGRNDSGQLGDGSFTNR-----------STPGAV 310
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ + +A G AHT +T + G + +G N GQ G G + G ++ L
Sbjct: 311 GGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGA-----VSGLP 365
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIV 181
+ G HT T SG V+ WG + GQ G G ++ TP V G G +
Sbjct: 366 -SGVTAIAAGGAHTCARTSSGGVWC--WGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAI 422
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ C L SD V+ WG++ YGQ+ + + STP +S S + +A+G
Sbjct: 423 AAGNYHTCALTGSDG--VWCWGDNFYGQLGDGTTTNRSTPGAVSGLP--SGVTAIAAGNY 478
Query: 241 ACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L G V+ WG G LG G +RS P + G S V ++ AG
Sbjct: 479 HTCALTSSGGVWCWGRNDSGQLGDGTTTNRST-----PGAVGGL-----PSGVTAIAAGD 528
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
A+ + G ++ WG N GQLG G+ D P VAVGG
Sbjct: 529 YHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTP--VAVGG 567
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
P+ V + + +A G AHT +T + G +G N FGQ G G +
Sbjct: 101 STPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTP-----V 155
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
++ L + G HT L SG V+ G+ GQ G G TP V G
Sbjct: 156 AVSGLP-SGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLP-- 212
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+ +++ A++ G V+ WG++ +GQ+ + S STP + S + +A
Sbjct: 213 SEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLP--SGVTAIA 270
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+GG L G V+ WG G LG G +RS P + G S V ++
Sbjct: 271 AGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRS-----TPGAVGGL-----PSGVTAI 320
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AG A+T+ G ++ WG N GQLG G+ D+ P V+
Sbjct: 321 AAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVS 362
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+ + G HT LT SG+V+ G+ GQ G G ++ TP V G G +
Sbjct: 60 QGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAG 119
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
A C L + G V WG + +GQ+ + S STP +S S + +A+GG+
Sbjct: 120 GAHTCAL--TSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLP--SGVTAIAAGGAHTC 175
Query: 244 MLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L G V+ WGY L LG G + + P + G S+V ++ AG
Sbjct: 176 ALMSSGGVWCWGYNLSGQLGDGSTIYH-----ITPVAVSGL-----PSEVTAIAAGYAHT 225
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG N +GQLG G+ D P V
Sbjct: 226 CALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAV 259
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 115/281 (40%), Gaps = 24/281 (8%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
P V + + +A G HT + + G + +G N+ GQ G G +
Sbjct: 509 STPGAVGGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTP-----V 563
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L +M G HT LT S V+ G +DGQ G G N+ TP V G G
Sbjct: 564 AVGGLP-SGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG 622
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+ + C L + G V+ WG + GQ+ + + STP +S S + +A
Sbjct: 623 VTAIAAGNYHTCAL--TSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLP--SGVTAIA 678
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G L G V+ WG YG LG G +RS P + G S V ++
Sbjct: 679 AGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRS-----TPGAVSGL-----PSGVTAI 728
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+T G + WG N GQLG G + P+ V
Sbjct: 729 AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 769
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 117/284 (41%), Gaps = 28/284 (9%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
P V + + +A G AHT T + G + +G N +GQ G G + G
Sbjct: 356 STPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGA---- 411
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEI 175
++ L + G HT LT S V+ WG + GQ G G N+ TP V G
Sbjct: 412 -VSGLP-SGVTAIAAGNYHTCALTGSDGVWC--WGDNFYGQLGDGTTTNRSTPGAVSGLP 467
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVD 234
G + + C L + G V+ WG ++ GQ+ + + STP + S +
Sbjct: 468 SGVTAIAAGNYHTCAL--TSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP--SGVTA 523
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G L G V+ WG G LG G S P + G S V
Sbjct: 524 IAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSST-----PVAVGGL-----PSGVM 573
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ AG A+T ++ WG N GQLG GT ++ P+ V+
Sbjct: 574 AIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVS 617
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 31/259 (11%)
Query: 31 GLNSDSQLG---YHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
GLN+ QLG Y D P+ V + + +A G HT +T ++
Sbjct: 544 GLNNRGQLGDGSYTDSST--------------PVAVGGLPSGVMAIAAGNYHTCALTGSD 589
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
G + +G NS GQ G G ++ L + G HT LT SG V+
Sbjct: 590 GVWCWGTNSDGQLGDGTTTNRSTP-----VAVSGLP-SGVTAIAAGNYHTCALTSSGGVW 643
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G+ GQ G G N+ TP V G G + +++ + A++ G V+ WG++ Y
Sbjct: 644 CWGYNLSGQLGDGTTTNRSTPGAVSGLPSG--VTAIAAGDEHTCALTGSGGVWCWGDNYY 701
Query: 208 GQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
GQ+ + + STP +S S + +A+G L G V WG G LG G
Sbjct: 702 GQLGDGTTTNRSTPGAVSGLP--SGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGR 759
Query: 264 KVSRSMKPTLIPSTLFGQH 282
+ R+ ++ S +G +
Sbjct: 760 PLYRTTPVDVVTSASWGVY 778
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+ +A+G L G V+ WGY G LG G RS P + G S
Sbjct: 62 VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS-----TPVAVSGL-----PS 111
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ AG A+T+ G + WG N +GQLG G+ D+ P+ V+
Sbjct: 112 GVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVS 158
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 275 PSTLFGQH--QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
PST H F+P V ++ AG A+T G ++ WG N GQLG G+ D+ P+
Sbjct: 45 PSTTTRLHTSSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV 104
Query: 333 KVA 335
V+
Sbjct: 105 AVS 107
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLR--------TQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIK-SLLGIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + +P
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDR-----------YVPN 234
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K TQ I ++ G HT +T G FTFG +GQ G E K F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF----- 289
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 27/280 (9%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + T+G GQ G G D Q + ++ L
Sbjct: 9 VTAPVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHG-----DAQDRLSPTILSTL 63
Query: 123 EGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG +I+ +CG DHT+ +ES VYS GWG G+ G G+ ++ TP +R ++ G +I
Sbjct: 64 EGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIR-QLHGLKIK 122
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G V WG ++ GQ+ + S P+ + +GV I VA+G
Sbjct: 123 QIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVP-IKMVAAGAE 181
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R L+P + H E ++
Sbjct: 182 HTAAVTEDGELYGWGWGRYGNLGLGDRKDR-----LVPEKVSLPHG-------EKMVMVA 229
Query: 298 CTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C + ++++ G LY +G ++YGQLG G D P ++
Sbjct: 230 CGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQL 269
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 148/338 (43%), Gaps = 35/338 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I + CG T+ ++S + ++ G +LG+ GN +L P
Sbjct: 66 LEIISVICGADHTIAYSES---HTDVYSWGWGDFGRLGH------GNSSDLFT-----PQ 111
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P++ +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 112 PIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQK-----IQ 166
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+G I G +HT +TE G++Y GWG G GLG ++ P V GE++
Sbjct: 167 AFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKM 225
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
V ++ ++VS G ++ +G S+YGQ+ + P L +G S I ++ G
Sbjct: 226 VMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQG-SFISQISGGW 284
Query: 240 SACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +G +Y WG+ GQ G V RS P + L + KV + G
Sbjct: 285 RHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRS-SPVQVKLPL--------EQKVILISCG 335
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T +++ WG+ GQLG G D+ P+ +
Sbjct: 336 WRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVII 373
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V + G G DGQ G G ++ +P ++ +EG I+ +
Sbjct: 14 RRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILS-TLEGLEIISVI 72
Query: 185 SAVDCVLAVSDK-GDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S+ DV+ WG ++G++ + + TP+ + Q G+ +I +A G S C
Sbjct: 73 CGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGL-KIKQIACGDSHC 131
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + + +L+P + Q ++ + AG
Sbjct: 132 LAVTMEGQVQSWGRNQNGQLGLG-----TTEDSLVPQKI----QAFQGVPIKMVAAGAEH 182
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T G LY WG +YG LGLG +D+ P KV++
Sbjct: 183 TAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSL 219
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVM---SFVRI 59
K+ +ACG+ T+ + S L+ G + QLG+ D P +L SF
Sbjct: 224 KMVMVACGWRHTISVSSSG----GLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSF--- 276
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCH 117
I ++ G HT+ +T + + +G N FGQ G G + + Q K
Sbjct: 277 ----------ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVK---- 322
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
LE +K++ CG HTL +TE V+S G G +GQ G G ++ P +++
Sbjct: 323 --LPLE-QKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIK 374
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 26/253 (10%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD-LEGEKIMDAVCGQDHTLFLTESGKVYS 148
F +G+ G+ G G ++EE F D E + +M A G +HTLFLT+ GKVYS
Sbjct: 2 FGWGSTIHGELGLGGIEEEHV----FTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYS 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LGH ++ P LV G ++ I+ ++ LA+S G+VF WG+ YG
Sbjct: 58 CGSNDYGQ--LGHDQPRKRPQLVSG-LDAYSIINVACGEMHSLALSRWGEVFSWGSDNYG 114
Query: 209 QISES---EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
Q+ +QI + S K ++V +A+G L + G ++ WG +G LG G
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAK--YQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLG 321
PT + S +LIA G A++ G ++ WGKN GQLG
Sbjct: 173 TITPYESTPTTVCSL---------SGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L + FP ++
Sbjct: 224 LNDTVSKKFPTQL 236
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 22/259 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ A G T+ TK K++ CG N QLG+ PRK+ + + ++
Sbjct: 36 VMKAALGANHTLFLTKDG----KVYSCGSNDYGQLGHDQPRKRPQLVSGLDAY------- 84
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I ++A G H++ ++ F++G++++GQ G + K I L
Sbjct: 85 -----SIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKL----IKSLA 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+++ GQ H++ LT +G+++ G GQ GLG + E+ + G +
Sbjct: 136 KYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ + AVS G VFGWG + GQ+ ++ + P L + SR+ ++ G
Sbjct: 196 ACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRN-SRVRFISCGDEFS 254
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
T L +G V+S G G+ GQ
Sbjct: 255 TFLTLDGGVFSCGAGMYGQ 273
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I IACG T +KS +FG G N + QLG +D K P +L +R
Sbjct: 190 IPFALIACGANHTFAVSKSG----AVFGWGKNINGQLGLNDTVSKKFPTQL--RTLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+++++ ++ G + +T + G F+ G +GQ G G E + +
Sbjct: 241 -----NSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNE-----ILPRQVLE 290
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G I CG+ H+L F+ G+VYS G G GQ GL +N TP +V G
Sbjct: 291 LMGSTITQISCGRQHSLAFVPSRGRVYSYGLGGAGQLGLRKPSNASTPQVVLG 343
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 71/182 (39%), Gaps = 63/182 (34%)
Query: 199 VFGWGNSEYGQISE---SEMQISTPRVLS--QCKGVSR---------------------- 231
+FGWG++ +G++ E + TP+ L + K V +
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 232 -------------------------IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
I++VA G L+ G V+SWG YG LG
Sbjct: 61 NDYGQLGHDQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQL 120
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ + P LI S K +V + AG A+TN G +++WG N +GQLGLG
Sbjct: 121 GGTLQIVPKLIKSL--------AKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172
Query: 324 TV 325
T+
Sbjct: 173 TI 174
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFAN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VYS G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYSWGLDSDGQLGL--LGSEEYIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D +++G +S GQ G ++ E+Y NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG--LLGSEEYIR--VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 VACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + ++I D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRIRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I+ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RIRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-VGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 120/265 (45%), Gaps = 19/265 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ +TDN+ F FG N G G D Q + L G+KI G H L
Sbjct: 35 LYVTDNDEVFVFGMNYSNCLGTG-----DSQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
TE G VY+ G Q G G N P V + +++V+++ +A++ G+V
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S TPR ++ C + ++V +A G ++ + D G VY WGY
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ L P + H V ++ G A+T+ G LY WG N
Sbjct: 210 NGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
YGQLG G + P+ + V ++
Sbjct: 261 TYGQLGTGNKNNLLNPVHIMVEKER 285
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F G+N + LG D + P +L +
Sbjct: 24 ACVFGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +++V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLNPV---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAV-DCV 190
+ L++T++ +V+ +G + LG ++Q T LV ++E G++I LS V
Sbjct: 32 NEALYVTDNDEVFV--FGMNYSNCLGTGDSQST--LVPKKLEALCGKKIKSLSYGSGPHV 87
Query: 191 LAVSDKGDVFGWGNSEYGQISE-------SEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
L ++ G V+ WG++ Y Q+ + +Q+ T ++ Q +V+VA G
Sbjct: 88 LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ------VVEVACGSHHSM 141
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
L +G V++WGY GQ S + +PT P + KV + G + A+
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTANQPT--PRKVTNCLHI---KKVVGIACGQTSSMAV 196
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G +Y WG N GQLGLG +Q P++VA
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVA 228
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 144/336 (42%), Gaps = 46/336 (13%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGC-GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
T +A G G T N++ C G NS QLG ++ P+ +
Sbjct: 479 TSLAAGDGHTCAL-----MNVRTAQCWGRNSSGQLGDGTTERRLTPVTV----------- 522
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ LA G +HT + D +G NS GQ G G + ++ L
Sbjct: 523 -SGLSAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTP-----VAVSGLS 576
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G + A G HT L ++G V GW + GQ G G ++ TP V G + G + L
Sbjct: 577 GATALAA--GNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSG-LSG--VTAL 631
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ + A+ D G V WG + GQ+ + + TP +S G+S + +A+G +
Sbjct: 632 AAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTPAAVS---GLSGVTALAAGANHT 688
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L D G V WG G LG G R + P+ + G S V +L+AG
Sbjct: 689 CALMDSGTVQCWGRNSSGQLGDGTTTDR-----VTPAAVSG------LSGVTALVAGANH 737
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ G + WGKN++GQLG GT D+ P+ V+
Sbjct: 738 TCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAVS 773
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 117/268 (43%), Gaps = 28/268 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
LA G +HT + D +G NS GQ G G + ++ L G + A
Sbjct: 581 LAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVTPAA-----VSGLSGVTALAA-- 633
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +HT L +SG V G + GQ G G ++ TP V G + G + L++ + A
Sbjct: 634 GANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTPAAVSG-LSG--VTALAAGANHTCA 690
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+ D G V WG + GQ+ + + TP +S GV+ +V +G + L G V
Sbjct: 691 LMDSGTVQCWGRNSSGQLGDGTTTDRVTPAAVSGLSGVTALV---AGANHTCALMPTGTV 747
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
WG +G LG G R L P + G S + +L AG A+ N G
Sbjct: 748 QCWGKNEFGQLGDGTTTDR-----LTPVAVSG------LSGITALAAGSEHTCAVLNTGA 796
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
WG+N +G+LG+ ++ P P V +
Sbjct: 797 ARCWGRNLFGRLGISPLDYSPLPRTVVI 824
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 123/280 (43%), Gaps = 32/280 (11%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
PLP+ +++ LA GR HT + + + +G N GQ G G + +
Sbjct: 72 PLPL----SRVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMP-----VAV 122
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L G + A G+ HT L +G V G + GQ G + N+ TP V G + G
Sbjct: 123 SGLSGVTALAA--GRYHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPVAVSG-LSG-- 177
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG 238
++ L++ A+ D V WG +E+GQ+ + TP +S GV+ + A G
Sbjct: 178 VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLSGVTAL--AAGG 235
Query: 239 GSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
C LN G V W G G LG G + SR L P + G S +L A
Sbjct: 236 RHTCAALN-TGTVQCWGGNGAGQLGDGTRTSR-----LTPMAVSG------LSGATALAA 283
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+ + G + WG N GQLG GT E + P+ V+
Sbjct: 284 GFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLTPVAVS 323
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 130/310 (41%), Gaps = 42/310 (13%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
GLNS QLG + ++ P+ V S I LA G HT + D
Sbjct: 151 GLNSSGQLG-----------DWTITNRVTPVAVSGLSGVIA-LAAGDRHTCALLDTRTVR 198
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G N GQ G G + +W ++ L G + A G HT +G V G
Sbjct: 199 CWGENEHGQLGDGTTND-----RWTPVAVSGLSGVTALAA--GGRHTCAALNTGTVQCWG 251
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
GQ G G ++ TP V G + G L++ + A+ D G V WG + GQ+
Sbjct: 252 GNGAGQLGDGTRTSRLTPMAVSG-LSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQL 308
Query: 211 SESEMQIS-TPRVLSQCKGVSRIVDVASGG-SACTMLNDEGLVYSWGY---GLLGQGPKV 265
+ + TP +S G+S + +A+G C +L E V WG G LG G
Sbjct: 309 GDGTTERRLTPVAVS---GLSGVTALAAGDFHTCAVLQTE-TVQCWGLNSSGQLGDGTTE 364
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
R L P ++ G S +L AG A+ G + WG+N++GQLG GT
Sbjct: 365 RR-----LTPVSVSG------LSGSTALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTT 413
Query: 326 EDQPFPLKVA 335
E + P+ V+
Sbjct: 414 ERRLTPVVVS 423
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 106/267 (39%), Gaps = 28/267 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
LA G HT + D +G NS GQ G G + + ++ L G + A
Sbjct: 281 LAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTER-----RLTPVAVSGLSGVTALAA-- 333
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G HT + ++ V G + GQ G G + TP V G + G + C L
Sbjct: 334 GDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSG-LSGSTALAAGGVHTCALL 392
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
G V WG +E+GQ+ + + TP V+S G + + A C +L
Sbjct: 393 --QTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGATALT--AGDRHTCAVLQTR-TA 447
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
WG G LG G R L P T+ G S SL AG A+ N
Sbjct: 448 QCWGENSPGQLGDGTTERR-----LTPVTVSG------LSGATSLAAGDGHTCALMNVRT 496
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
WG+N GQLG GT E + P+ V+
Sbjct: 497 AQCWGRNSSGQLGDGTTERRLTPVTVS 523
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 143/336 (42%), Gaps = 35/336 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT + CG T T + +++ G +LG+ GN + V P PV
Sbjct: 68 ITSVICGADHT---TAYSEDEHQVYSWGWGDFGRLGH------GNSTD-----VFTPQPV 113
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K +IK LA G +H + +T ++G N GQ G G ++ I
Sbjct: 114 KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTED-----SLLPQTIQAF 168
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG + G +HT +TE G +Y GWG G GLG N++ P V +EG+++V
Sbjct: 169 EGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVS-SVEGDKMVL 227
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ + VS G ++ +G S+YGQ+ + + P + K S SGG
Sbjct: 228 VACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSS--TSQISGGWR 285
Query: 242 CTM-LNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
TM L +G +Y WG+ GQ + P Q F + KV + G
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPA--------QVNFPEEQKVAQVACGWR 337
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A T +++ WG+ GQLG G + D+ P+ +
Sbjct: 338 HTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVII 373
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G +H++ + T+G GQ G G D + + I+ + I +C
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHG-----DAEDRLVPTVISGFDAPGITSVIC 73
Query: 133 GQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G DHT +E +VYS GWG G+ G G+ + TP V+ ++G +I +L+ L
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA-LQGIKIKQLACGDSHCL 132
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV+ G+V WG ++ GQ+ + S P+ + +G+S + +A+G + ++G
Sbjct: 133 AVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS-VKMIAAGAEHTAAVTEDGD 191
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE--SLIAGPCTFG---A 302
+Y WG YG LG G + R +P + S VE ++ C +
Sbjct: 192 IYGWGWGRYGNLGLGDRNDR-----FVPEKV---------SSVEGDKMVLVACGWRHTIT 237
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G ED P KV
Sbjct: 238 VSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKV 269
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEG-A 89
G D QLG+ D + P V+S P I + G HT +++E
Sbjct: 39 GRGEDGQLGHGDAEDRLVPT--VISGFDAP--------GITSVICGADHTTAYSEDEHQV 88
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + + L+G KI CG H L +T +G+V S
Sbjct: 89 YSWGWGDFGRLGHG-----NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSW 143
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ EG + +++ + AV++ GD++GWG YG
Sbjct: 144 GRNQNGQLGLGTTEDSLLPQTIQA-FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGN 202
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S +G ++V VA G ++ G +Y++G YG LG G
Sbjct: 203 LGLGDRNDRFVPEKVSSVEG-DKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHG--- 258
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P + + S + G A+T+ G LY WG N++GQ+G G
Sbjct: 259 --DFEDHLVPHKV----EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312
Query: 326 EDQPFPLKV 334
D P +V
Sbjct: 313 ADHCSPAQV 321
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG + T + + + G N + QLG P + + +F I
Sbjct: 119 IKIKQLACGDSHCLAVTMAGE----VLSWGRNQNGQLGLGTTEDSLLP-QTIQAFEGI-- 171
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D ++ ++
Sbjct: 172 -------SVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLG-----DRNDRFVPEKVSS 219
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EG+K++ CG HT+ ++ SG +Y+ GW GQ G G + P V ++
Sbjct: 220 VEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTS 278
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + ++ VA G
Sbjct: 279 QISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRH 338
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
++ V++WG G LG G V R+ P +I
Sbjct: 339 TLAFTEKKNVFAWGRGTSGQLGHGEIVDRNT-PVII 373
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+AD ++ G H++ L + + G G DGQ G G ++ P ++ G +
Sbjct: 8 VADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISG-FDAP 66
Query: 179 RIVKLSSAVDCVLAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
I + D A S D+ V+ WG ++G++ + + TP+ + +G+ +I +A
Sbjct: 67 GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLA 125
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G S C + G V SWG G LG G + + +L+P T+ Q V+ +
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLG-----TTEDSLLPQTI----QAFEGISVKMI 176
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AG A+T G +Y WG +YG LGLG D+ P KV+
Sbjct: 177 AAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVS 218
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 119/223 (53%), Gaps = 33/223 (14%)
Query: 126 KIMDAVCGQD----------HTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGE 174
KI++ +C +D H L +T+SG++YS G G GQ LGH + +++ P LV +
Sbjct: 66 KIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQ--LGHTSEEKSKPVLVYMQ 123
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQCKGVS 230
+++++++ +A+++ G+V+ WG++ GQ IS ++ +TP+ +S
Sbjct: 124 ---KKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQ---ATPKRVSLIPS-K 176
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVSRSMKPTLIPSTLFGQHQFNPKS 288
+IV V+ G S ML +G +YSWGY GQ + ++P + +LFG+
Sbjct: 177 KIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKF------ 230
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+E ++ G +T+ G LY WG N YGQLGLGT + P
Sbjct: 231 -IEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVP 272
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 23/255 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +A G G V+A + L+ G QLG H +K P+ + M
Sbjct: 76 IVQLAYGMGPHVLAVTDSGE---LYSWGHGGYGQLG-HTSEEKSKPVLVYMQ-------- 123
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G H+I +T++ + +G+N+ GQ G GI + + ++ +
Sbjct: 124 ----KKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKR-----VSLIP 174
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+KI+ CGQ T+ LT G++YS G+ +GQ G+ + NQ P V G + G+ I K+
Sbjct: 175 SKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKI 234
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG--GSA 241
+ VL ++D G+++ WG + YGQ+ ++ L R D+A+
Sbjct: 235 VCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHI 294
Query: 242 CTMLNDEGLVYSWGY 256
+ G +Y WG+
Sbjct: 295 SAGVTISGKIYMWGH 309
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAV 193
+ L +G VY+ G+ +G G+G ++ P ++ ++ + IV+L+ + VLAV
Sbjct: 32 NEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIE-QLCQKDIVQLAYGMGPHVLAV 90
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+D G+++ WG+ YGQ+ + + S P ++ K +++ VA G L ++G VY+
Sbjct: 91 TDSGELYSWGHGGYGQLGHTSEEKSKPVLVYMQK---KVIQVACGSYHSIALTEDGEVYA 147
Query: 254 WGYGLLGQ-GPKVSRSM----KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
WG GQ G +S + + +LIPS K+ S+ G +T G
Sbjct: 148 WGSNNCGQLGLGISNNQATPKRVSLIPS-----------KKIVSVSCGQSFTVMLTTDGE 196
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
LY WG N GQLG+ +Q P++V
Sbjct: 197 LYSWGYNGNGQLGIENNTNQLQPVRVT 223
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 220 PRVLSQ-CKGVSRIVDVASG-GSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPS 276
P+++ Q C+ IV +A G G + D G +YSWG+G GQ G KP L+
Sbjct: 65 PKIIEQLCQ--KDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLGHTSEEKSKPVLVYM 122
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ KV + G A+T G +Y WG N GQLGLG +Q P +V++
Sbjct: 123 ----------QKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSL 172
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++CG FTV+ T + L+ G N + QLG + + P+ + S
Sbjct: 177 KIVSVSCGQSFTVMLTTDGE----LYSWGYNGNGQLGIENNTNQLQPVRVTGSLF----- 227
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
I+ + G AH +V+TD +++G NS+GQ G G
Sbjct: 228 ----GKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLG 264
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + ++I D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRIRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I+ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RIRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
Length = 287
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 87 EGAFTFGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+ TFG N GQ G G ++ + F NI L+ E+++ CG HT+ L
Sbjct: 3 DAVITFGCNDDGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALA 62
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPC-LVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
SG VYS GWG+ GQ G G L + P +V E G ++ +S AV+ G ++
Sbjct: 63 ASGAVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKDGTLY 122
Query: 201 GWGNSEYGQIS-ESEMQISTPRVLSQC---KGVSR--IVDVASGGSACTMLNDEGLVYSW 254
WG S +GQ+ E + + + +C +G+++ IV V+ GG+ L + G VY W
Sbjct: 123 MWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHGRVYIW 182
Query: 255 GYGLLGQ--------GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G G GQ S+ T P L G FN + +V + G A+T
Sbjct: 183 GRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDG---FNGE-RVVQVACGAFHSAAVTEK 238
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP 331
G++Y+W K YG LG+G D P
Sbjct: 239 GYVYIWXKEDYGMLGIGQSSDXQNP 263
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 118/271 (43%), Gaps = 38/271 (14%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVITDN 86
FGC N D QLG R+ ++ V S P + ++ ++ G HT+ + +
Sbjct: 8 FGC--NDDGQLGTGAKRRPMLAIDGV-SAANFPQNIDGLQDEEVVAVSCGSRHTMALAAS 64
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGK--WFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+++G S GQ G G ++ + K +F N G K+ CG H+ +T+ G
Sbjct: 65 GAVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQN-----GLKVNYISCGGCHSAAVTKDG 119
Query: 145 KVYSCGWGADGQTGL--GHLNNQET---PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
+Y G GQ GL H E+ C + + E IVK+S A+++ G V
Sbjct: 120 TLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHGRV 179
Query: 200 FGWGNSEYGQI-----------SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+ WG + GQ+ ES ++ S P++L G R+V VA G + ++
Sbjct: 180 YIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNG-ERVVQVACGAFHSAAVTEK 238
Query: 249 GLVYSWG---YGLLG-------QGPKVSRSM 269
G VY W YG+LG Q PK + S
Sbjct: 239 GYVYIWXKEDYGMLGIGQSSDXQNPKSASSF 269
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 19/175 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY---HDPRKKGNPLELVMSFVR 58
+K+ I+CG + TK D L ++G + QLG H+ + P+E
Sbjct: 100 LKVNYISCGGCHSAAVTK--DGTLYMWG--ESHWGQLGLPKEHEAAHESLPVEC------ 149
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+P I ++ G HT +T++ + +G GQ G G + + +
Sbjct: 150 -PMPEGLTKECIVKVSCGGTHTAALTNHGRVYIWGRGDSGQLGIGSTWFNNTEDESLLRT 208
Query: 119 -----IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+ GE+++ CG H+ +TE G VY G G+G ++ + P
Sbjct: 209 SRPQLLDGFNGERVVQVACGAFHSAAVTEKGYVYIWXKEDYGMLGIGQSSDXQNP 263
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 119/265 (44%), Gaps = 19/265 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLF 139
+ +TDN+ F FG N G G D Q + L G+KI G H L
Sbjct: 35 LYVTDNDEVFVFGMNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGSAPHVLL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
TE G VY+ G Q G G N P V + +++V+++ +A++ G+V
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S TPR ++ C + ++V +A G ++ + D G VY WGY
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ L P + H V ++ G A+T+ G LY WG N
Sbjct: 210 NGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
YGQLG G + P V V ++
Sbjct: 261 TYGQLGTGNKNNLLSPAHVLVEKER 285
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 26/255 (10%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G A H ++ T++ + +G+N + Q G G QG +L +++
Sbjct: 75 KIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGVAPIQVCTNLLIKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+V++ G+ GQ G G NQ TP V + +++V ++
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K + + P H K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HVLVEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T G++YMWG+
Sbjct: 298 SAAKTQSGNVYMWGQ 312
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 28/213 (13%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLS--SAVDC 189
+ L++T++ +V+ +G + LG +NQ T LV ++E G++I LS SA
Sbjct: 32 NEALYVTDNDEVFV--FGMNYSNCLGTGDNQST--LVPKKLEALCGKKIKSLSYGSAPHV 87
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-------SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+L+ D G V+ WG++ Y Q+ + +Q+ T ++ Q +V+VA G
Sbjct: 88 LLSTED-GVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQ------VVEVACGSHHS 140
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G V++WGY GQ S + +PT P + KV + G + A
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPT--PRKVTNCLHI---KKVVGIACGQTSSMA 195
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + G +Y WG N GQLGLG +Q P++VA
Sbjct: 196 VLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVA 228
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + ++I D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRIRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I+ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RIRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 117/248 (47%), Gaps = 26/248 (10%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN S+GQ G G + EE A+ +K+ D CG HT+F+ + G VY+CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFAN---KKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG GQ+
Sbjct: 61 NDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117
Query: 212 E--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 118 LLGSEEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 267 RSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P LI S L F Q + AG +T G ++ WG+N++GQLGL
Sbjct: 177 KQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VYS G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYSWGLDSDGQLGL--LGSEEYIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLR--------SQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D +++G +S GQ G ++ E+Y NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG--LLGSEEYIR--VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 VACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 28/262 (10%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G H++ + + + +G+NS GQ G ++ + + L G M G
Sbjct: 304 GSYHSLALRSDGSVWAWGHNSSGQLG-----DDSSTSRSVPVQVRGLSGG--MAVTAGSS 356
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H+L + G V++ G G+ G G NN+ +P V+G G V +++ + LA
Sbjct: 357 HSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGG---VAVAAGFNHSLAARS 413
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+ WG+++ GQ+ + + ST V Q +G+S +V VA+G L +G V++WG
Sbjct: 414 DGSVWAWGSNDSGQLGDGTTRNSTSPV--QVQGLSGVVAVAAGFDHSLALRSDGSVWAWG 471
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LG+G +R L+P + S V ++ AG A+ + G ++ W
Sbjct: 472 SNAYGQLGEGTTTNR-----LVPVQVL--------SGVVAVAAGSNHSLAVRSDGTVWTW 518
Query: 313 GKNQYGQLGLGTVEDQPFPLKV 334
G N YGQLG GT ++ P++V
Sbjct: 519 GSNLYGQLGDGTTSNRLVPVQV 540
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 43/313 (13%)
Query: 25 LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
L GCGL +D + +G PL S R LA G ++++ +
Sbjct: 20 LMGVGCGLPTDESA---EQTSRGAPLRDAPSRAR--------------LAAGSSYSLALR 62
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ + G+N GQ G G + + L G ++ G H+L + G
Sbjct: 63 PDGTVWATGSNDLGQLGDGTTTNHSAPVQ-----VPGLSG--VVAVAAGSSHSLAVRHDG 115
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G +DGQ G G + TP V+G + G +V +++ LAV G V+ WG+
Sbjct: 116 TVWAWGSNSDGQLGDGTTTMRLTPVRVQG-LSG--VVSVAAGSSYSLAVRSDGTVWAWGS 172
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
+ GQ+ + S V Q G+S +V VA+G S + +G V++WG G LG
Sbjct: 173 NFSGQLGDGTT--SNRLVPVQVPGLSGVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGD 230
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G K++R + P +P SL A+ + G ++ WG N +GQLG
Sbjct: 231 GTKINR-LVPVQVPG--LSGVVAVAAGAAHSL--------AVRSDGTVWTWGANSFGQLG 279
Query: 322 LGTVEDQPFPLKV 334
GT D+ P++V
Sbjct: 280 DGTKSDRLVPVRV 292
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 42/331 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+A GF D ++ +G N QLG R +P+++
Sbjct: 399 VAVAAGFNHSLAARSDGSVWAWGS--NDSGQLGDGTTRNSTSPVQV------------QG 444
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ + +A G H++ + + + +G+N++GQ G G + L G
Sbjct: 445 LSGVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNR-------LVPVQVLSG-- 495
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ G +H+L + G V++ G GQ G G +N+ P V+G + G + +++
Sbjct: 496 VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQG-LSG--VAAVAAG 552
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LAV G V+ WG++ G++ + S V + G+S V VA+GG ++
Sbjct: 553 SFHSLAVHSDGSVWAWGSNSSGELGDGTT--SNRLVPGRVPGLSGGVAVAAGGFHSLVVR 610
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G V++WG +G LG G SRS+ Q S V ++ AG A+
Sbjct: 611 SDGTVWTWGSNSFGELGDGTTTSRSVPV-----------QVQGLSGVVAVDAGNSHSLAV 659
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N YGQLG GT + P++V
Sbjct: 660 RSDGTVWTWGYNSYGQLGDGTTTRRSVPVQV 690
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 40/302 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++ G N+ QLG + P++++ V + A G H++ +
Sbjct: 466 SVWAWGSNAYGQLGEGTTTNRLVPVQVLSGVVAV--------------AAGSNHSLAVRS 511
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +T+G+N +GQ G G + + L G + G H+L + G
Sbjct: 512 DGTVWTWGSNLYGQLGDGTTSN-----RLVPVQVQGLSG--VAAVAAGSFHSLAVHSDGS 564
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ G + G+ G G +N+ P V G G V +++ L V G V+ WG++
Sbjct: 565 VWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG---VAVAAGGFHSLVVRSDGTVWTWGSN 621
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQG 262
+G++ + ++ V Q +G+S +V V +G S + +G V++WGY G LG G
Sbjct: 622 SFGELGDGTT--TSRSVPVQVQGLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDG 679
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
RS+ P +P S V ++ G + + G ++ WG N +GQLG
Sbjct: 680 TTTRRSV-PVQVPGL----------SGVVAMATGALHPLVVRSDGTVWAWGYNSFGQLGN 728
Query: 323 GT 324
G+
Sbjct: 729 GS 730
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 26/262 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ + + +T+G NSFGQ G G + + + L G D G H+L
Sbjct: 257 HSLAVRSDGTVWTWGANSFGQLGDGTKSD-----RLVPVRVQGLSGVVASD--VGSYHSL 309
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L G V++ G + GQ G ++ P VRG G + SS LAV G
Sbjct: 310 ALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVTAGSS---HSLAVGSDGT 366
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
V+ WG++ G+ E V Q +G+ V VA+G + +G V++WG
Sbjct: 367 VWAWGSNFSGERGEGTTNNRASPV--QVQGLGGGVAVAAGFNHSLAARSDGSVWAWGSND 424
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G S P Q S V ++ AG A+ + G ++ WG N
Sbjct: 425 SGQLGDG-TTRNSTSPV----------QVQGLSGVVAVAAGFDHSLALRSDGSVWAWGSN 473
Query: 316 QYGQLGLGTVEDQPFPLKVAVG 337
YGQLG GT ++ P++V G
Sbjct: 474 AYGQLGEGTTTNRLVPVQVLSG 495
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V+ S + +A G H++ + + + +G+NS G+ G G G+
Sbjct: 536 VPVQVQGLS-GVAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGR----- 589
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G + A G H+L + G V++ G + G+ G G ++ P V+G + G
Sbjct: 590 VPGLSGGVAVAA--GGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG-LSG- 645
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+V + + LAV G V+ WG + YGQ+ + + + S P Q G+S +V +A+
Sbjct: 646 -VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPV---QVPGLSGVVAMAT 701
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF 279
G ++ +G V++WGY GQ S T I S L+
Sbjct: 702 GALHPLVVRSDGTVWAWGYNSFGQLGNGSPLFATTAIRSLLY 743
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G T ++F GLN S LG D P +L F+R
Sbjct: 144 ACVFGTTANEAIYITHGNEVFVFGLNCSSCLGTGDGLSTVMPKKL--DFLR--------G 193
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ L+ G H ++ TD+ F +G+N + Q G G G A+L+ +K
Sbjct: 194 KKVASLSYGSGPHVLLATDDGQLFAWGHNGYSQLGNGSTNP----GLSPVLITANLQNKK 249
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ + CG H++ LT G+V++ G+ GQ G G NQ P V G ++G+ ++
Sbjct: 250 VKEVSCGSHHSMALTLDGEVFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNASGITCG 309
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A+ D G+V+GWG + GQ I + Q+ TP ++ +G+ I + SG C
Sbjct: 310 QTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQL-TPCRVAALQGMC-IQQIVSGYGHCLA 367
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L D+GL+Y+WG YG LG G K S + P H K +V + A T
Sbjct: 368 LTDKGLLYAWGANTYGQLGTGTK-SNHLSPV---------HIMADKERVVEVAACHSTHT 417
Query: 301 -GAITNFGHLYMWGK 314
A T G ++MWG+
Sbjct: 418 SAAKTQSGQVFMWGQ 432
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 19/265 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I IT F FG N G G D + L G+K+ G H L
Sbjct: 155 IYITHGNEVFVFGLNCSSCLGTG-----DGLSTVMPKKLDFLRGKKVASLSYGSGPHVLL 209
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T+ G++++ G Q G G N +P L+ ++ +++ ++S +A++ G+V
Sbjct: 210 ATDDGQLFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEV 269
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQI S S PR ++ C + G ++ L D G VY WGY
Sbjct: 270 FAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGYNG 329
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G + P + + L G ++ +++G A+T+ G LY WG N
Sbjct: 330 NGQLGIGNN-GNQLTPCRVAA-LQGM-------CIQQIVSGYGHCLALTDKGLLYAWGAN 380
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
YGQLG GT + P+ + ++
Sbjct: 381 TYGQLGTGTKSNHLSPVHIMADKER 405
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 28/249 (11%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ + P LI S L + AG +T G ++ WG+N++GQLGL
Sbjct: 173 IECQKQTSPQLIKSLL--------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 323 GTVEDQPFP 331
D+ P
Sbjct: 225 NDENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIK-SLSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLR--------SQKIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIK-SLLG 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TD++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDSDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K ++ + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERIVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLADIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQ-ASPKLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 ADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 32/306 (10%)
Query: 37 QLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNS 96
QLG+ D + + P LV++F+ ++ ++ G HT ++ +N FTFG +
Sbjct: 18 QLGHGDEKTQRQP-RLVVAFLGF---------NVRQVSCGNQHTAILMENGEVFTFGRGN 67
Query: 97 FGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
FGQ G+G + ++ L+G+ + CG HT L ++G++Y+ G G G+
Sbjct: 68 FGQLGQGASVTANVSTPAL---VSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGR 124
Query: 157 TGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEM 215
G G Q +P LV ++G+ + +++ + + G++ WG +GQ+ E
Sbjct: 125 LGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDET 183
Query: 216 QISTPRVLSQCKGVSRIV--DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMK 270
TP+++ KGV + + +VA G ML V++WG +G LG G + + +
Sbjct: 184 DRKTPKMV---KGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDE-EKHAE 239
Query: 271 PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
P +I + V + G A+T+ G LY WG GQLG G Q
Sbjct: 240 PIMITAL--------QGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNI 291
Query: 331 PLKVAV 336
P+ V V
Sbjct: 292 PVVVEV 297
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I +TDN+ F FG N G G D Q + L G+KI G H L
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
TE G VY+ G Q G G N P V + +++V+++ +A++ G+V
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
F WG + GQ+ S S TPR ++ C R+V +A G ++ + D G VY WGY
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G + P + + V ++ G A+T+ G LY WG N
Sbjct: 210 NGQLGLGNN-GNQLTPVRVAAL--------QSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
YGQLG G+ + P + V ++
Sbjct: 261 TYGQLGTGSKNNLLSPTPIMVEKER 285
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + Q V++IV G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGSK-NNLLSPTPI---------MVEKERVVEIAACHSTH 296
Query: 301 --GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 30/214 (14%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAV-DCV 190
+ +++T++ +V+ +G + LG +NQ T LV ++E G++I LS V
Sbjct: 32 NEAIYVTDNDEVFV--FGLNYSNCLGTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHV 87
Query: 191 LAVSDKGDVFGWGNSEYGQISE-------SEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
L ++ G V+ WG++ Y Q+ + +Q+ T ++ Q +V+VA G
Sbjct: 88 LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ------VVEVACGSHHSM 141
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPT--LIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V++WGY GQ S + +PT + S L + +V S+ G +
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK-------RVVSIACGQTSSM 194
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ + G +Y WG N GQLGLG +Q P++VA
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVA 228
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLADIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ + + Q ++P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQ-ASPKLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 ADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 128/257 (49%), Gaps = 21/257 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
+L+ G HT +IT N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 YLSCGDEHTALITGNSKLYMFGSNNWGQLGLG---SKTTVNKPTC--VKALKPEKVKIAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE GKVY+ G ++GQ GLG + T LV +I +LS+ +
Sbjct: 94 CGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI E + P ++ K +S I + G + EG
Sbjct: 154 ALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWI---SCGYYHSAFVTTEGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y++G G LG P+ +K IP + G KV + G A+T
Sbjct: 211 LYTFGEPENGKLGLSPE---QLKNHRIPQLVLG-----IPGKVNQVACGGGHTVALTE-E 261
Query: 308 HLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 262 EVYTFGLGQFGQLGLGT 278
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHTALITG----NSKLYMFGSNNWGQLGLGSKTTVNKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE-DYQGKWFCHNIADLEGE 125
+K A GR HT+V T+ + G NS GQ G G +E +Q F
Sbjct: 89 ---VKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFF-----TAQH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G ++ G ++GQ GL N P V G+ I +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTI---GKPISWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTM 244
V+ +G+++ +G E G++ S Q+ R+ G+ ++ VA GG
Sbjct: 198 GYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVA 257
Query: 245 LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +E VY++G G GQ G + + +P ++ +H N K++ + G
Sbjct: 258 LTEEE-VYTFGLGQFGQLGLGTFIFETSEPKVV------KHLQN--QKIQYIACGENHTA 308
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
I++ GH+Y +G ++G+LGLG
Sbjct: 309 LISDTGHMYTFGDGRHGKLGLG 330
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T + L+ G + +LG + K + RIP V
Sbjct: 195 ISCGYYHSAFVTTEGE----LYTFGEPENGKLGLSPEQLKNH---------RIPQLVLGI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+ +T+ E +TFG FGQ G G E + K H L+ +K
Sbjct: 242 PGKVNQVACGGGHTVALTEEE-VYTFGLGQFGQLGLGTFIFETSEPKVVKH----LQNQK 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT ++++G +Y+ G G G+ GLG N NQ P L
Sbjct: 297 IQYIACGENHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVPTL 342
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 64/291 (21%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ACG T+V T+ K++ G NS+ QLG D ++ +LV F
Sbjct: 88 KVKIAACGRNHTLVYTEEG----KVYAAGGNSEGQLGLGDTEERTT-FQLVSFFT----- 137
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG-----IVQEEDYQGK---- 113
+H +IK L+ G + +T++ F +G+NS GQ G V E GK
Sbjct: 138 AQH---KIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISW 194
Query: 114 ----WFCHNIADLEGE---------------------------------KIMDAVCGQDH 136
++ EGE K+ CG H
Sbjct: 195 ISCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGKVNQVACGGGH 254
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
T+ LTE +VY+ G G GQ GLG + + V ++ ++I ++ + +SD
Sbjct: 255 TVALTEE-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDT 313
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGSACTML 245
G ++ +G+ +G++ + + V + C + + VA GG C ML
Sbjct: 314 GHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGG--CHML 362
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML-NDEGLVYSWG- 255
++ +G++ +GQ+ S+ ++ P + K V +A+ G T++ +EG VY+ G
Sbjct: 56 LYMFGSNNWGQLGLGSKTTVNKPTCVKALK--PEKVKIAACGRNHTLVYTEEGKVYAAGG 113
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G R+ + S QH K++ L AG T A+T G L+MWG
Sbjct: 114 NSEGQLGLGDTEERTT--FQLVSFFTAQH------KIKQLSAGSNTSAALTEDGVLFMWG 165
Query: 314 KNQYGQLGLGTVEDQPFPLKVAVG 337
N GQ+GL + P +V +G
Sbjct: 166 DNSEGQIGLAEEANVCVPSEVTIG 189
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +T+++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTEDDEVFVFGLNYSNCLGTG-----DNQSTLTPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G V++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNVNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPTHIMVEKER 285
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 144/314 (45%), Gaps = 32/314 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + ++ ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+AV D G+V+GWG + GQ+ + + TP ++ V + + G + L
Sbjct: 190 QTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC-VNQIVCGYAHTLAL 248
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTF 300
DEGL+Y+WG YG LG G K + + PT H K +V + A T
Sbjct: 249 TDEGLLYAWGANTYGQLGTGNK-NNLLSPT---------HIMVEKERVVEIAACHSAHTS 298
Query: 301 GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 299 AAKTQGGHVYMWGQ 312
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 140/316 (44%), Gaps = 26/316 (8%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P L +F P V + G HT +D E
Sbjct: 45 GRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA------SVVICGADHTTAYSDEELQL 98
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + I L+G +I CG H L +T +G V+S
Sbjct: 99 YSWGWGDFGRLGHG-----NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSW 153
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P ++ EG R+ +++ + AV++ GD++GWG YG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 212
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG--- 262
+ + P +S G ++V VA G ++ G +Y++G YG LG G
Sbjct: 213 LGLGDRDDRLIPEKVSSVNG-QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 263 ----PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P ++K T I + F + G + A+ G LY WG N++G
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQW-ALAADGKLYGWGWNKFG 330
Query: 319 QLGLGTVEDQPFPLKV 334
Q+G+G ED P++V
Sbjct: 331 QVGVGDNEDHCSPVQV 346
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 141/341 (41%), Gaps = 42/341 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLEL-VMSFVRIPLPVKH 65
+ CG T T D+ L+L+ G +LG+ + NP + + VRI
Sbjct: 81 VICGADHT---TAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI------ 131
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
TQI A G +H + +T ++G N GQ G G ++ I EG
Sbjct: 132 --TQI---ACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTED-----SLLPQKIQAFEGV 181
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G +HT +TE G +Y GWG G GLG +++ P V + G+++V ++
Sbjct: 182 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVS-SVNGQKMVLVAC 240
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE---------MQISTPRVLSQCKGVSRIV--- 233
+ VS G ++ +G S+YGQ+ + ++ +SQ + V I
Sbjct: 241 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFL 300
Query: 234 ---DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
GG L +G +Y WG+ GQ + + Q F + KV
Sbjct: 301 GDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPV------QVNFPNEQKV 354
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G A+T +++ WG+ GQLG G + D+ P
Sbjct: 355 VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIP 395
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G +H++ + ++G GQ G G ++ D G
Sbjct: 18 PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTV-LTAAFDDAPGG 76
Query: 126 KIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+CG DH T + E ++YS GWG G+ G G+ ++ P ++ ++G RI +++
Sbjct: 77 VASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQA-LQGVRITQIA 135
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ G V WG ++ GQ+ + S P+ + +GV R+ +A+G
Sbjct: 136 CGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTA 194
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIP---STLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R LIP S++ GQ K+ + G
Sbjct: 195 AVTEDGDLYGWGWGRYGNLGLGDRDDR-----LIPEKVSSVNGQ-------KMVLVACGW 242
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G +Y +G ++YGQLG G ED P K+
Sbjct: 243 RHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 41/292 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++IT IACG + T + + G N + QLG + P + + +F
Sbjct: 129 VRITQIACGDSHCLAVTVAG----HVHSWGRNQNGQLGLGNTEDSLLP-QKIQAF----- 178
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++K +A G HT +T++ + +G +G G G D + ++
Sbjct: 179 ----EGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRDDRLIPEKVSS 229
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ G+K++ CG HT+ ++ SG +Y+ GW GQ G G + P + E + +
Sbjct: 230 VNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL--EALKDTTI 287
Query: 182 KLSSAVDCVL----------------AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ 225
AV+ + A++ G ++GWG +++GQ+ + + V
Sbjct: 288 SQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVN 347
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
++V VA G L + V+SWG G LG G V R++ P +I
Sbjct: 348 FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNI-PKMI 398
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAVD 188
G H++ L G V S G G DGQ G G ++ P ++ + G + D
Sbjct: 27 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGAD 86
Query: 189 CVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A SD+ ++ WG ++G++ + + P+ + +GV RI +A G S C +
Sbjct: 87 HTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSHCLAVT 145
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+SWG G LG G + + +L+P + Q +V+ + AG A+
Sbjct: 146 VAGHVHSWGRNQNGQLGLG-----NTEDSLLPQKI----QAFEGVRVKMIAAGAEHTAAV 196
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
T G LY WG +YG LGLG +D+ P KV +V GQK
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-ADLEGE-KIMDAVCGQDHTLFLTESGKVY 147
+ +G N FGQ G G ED+ C + + E K++ CG HTL LTE+ V+
Sbjct: 322 YGWGWNKFGQVGVG--DNEDH-----CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 374
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRG---------EIEGERIVKLSSAV 187
S G G GQ G G + ++ P ++ ++E + V +S+ V
Sbjct: 375 SWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKV 423
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 142/333 (42%), Gaps = 29/333 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT + CG T T + +++ G +LG+ GN S V P PV
Sbjct: 78 ITSVICGADHT---TAYSEDEQQVYSWGWGDFGRLGH------GNS-----SDVFTPQPV 123
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 124 KALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK-----IQSF 178
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG + G +HT +TE G +Y GWG G GLG N++ P V +EGE++V
Sbjct: 179 EGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVS-SVEGEKMVL 237
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ + VS G ++ +G S+YGQ+ + + P L K S I ++ G
Sbjct: 238 IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-SSISQISGGWRH 296
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G +Y WG+ GQ P Q +F KV + G
Sbjct: 297 TMALTSDGKLYGWGWNKFGQ--VGVGDTDDHCFPV----QVKFPEDQKVAQVACGWRHTL 350
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A T +++ WG+ GQLG G + D+ P+ +
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMI 383
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 143/313 (45%), Gaps = 29/313 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L G D QLG+ D + P V+S P I + G HT +++
Sbjct: 43 LCSWGRGEDGQLGHGDAEDRLVPT--VLSGFDAAAP------GITSVICGADHTTAYSED 94
Query: 87 EG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
E +++G FG+ G G + + + L+G KI CG H L +T +G+
Sbjct: 95 EQQVYSWGWGDFGRLGHG-----NSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGE 149
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V S G +GQ GLG + P ++ EG + +++ + AV++ GD++GWG
Sbjct: 150 VQSWGRNQNGQLGLGTTEDSLLPQKIQ-SFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWG 208
Query: 206 EYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
YG + + P +S +G ++V +A G ++ G +Y++G YG LG
Sbjct: 209 RYGNLGLGDRNDRLVPEKVSSVEG-EKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGH 267
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + L+P L + S + + G A+T+ G LY WG N++GQ+G
Sbjct: 268 G-----DFEDHLVPHKL----EALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 318
Query: 322 LGTVEDQPFPLKV 334
+G +D FP++V
Sbjct: 319 VGDTDDHCFPVQV 331
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI IACG + T + + + G N + QLG P + + SF +
Sbjct: 129 IKIKQIACGDSHCLAVTMAGE----VQSWGRNQNGQLGLGTTEDSLLP-QKIQSFEGV-- 181
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D + ++
Sbjct: 182 -------CVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRNDRLVPEKVSS 229
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EGEK++ CG HT+ ++ SG +Y+ GW GQ G G + P + ++ I
Sbjct: 230 VEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSSIS 288
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + V + ++ VA G
Sbjct: 289 QISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRH 348
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
++ V+SWG G LG G V R+ KP +I
Sbjct: 349 TLAFTEKKNVFSWGRGTSGQLGHGEIVDRN-KPVMI 383
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G +H++ + ++G GQ G G ++ + D
Sbjct: 20 PPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVP---TVLSGFDAAAP 76
Query: 126 KIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
I +CG DHT +E +VYS GWG G+ G G+ ++ TP V+ ++G +I +++
Sbjct: 77 GITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKA-LQGIKIKQIA 135
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ G+V WG ++ GQ+ + S P+ + +GV + +A+G
Sbjct: 136 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVC-VKMIAAGAEHTA 194
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ ++G +Y WG YG LG G + R L+P + + E ++ C +
Sbjct: 195 AVTEDGDLYGWGWGRYGNLGLGDRNDR-----LVPEKV-------SSVEGEKMVLIACGW 242
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G ED P K+
Sbjct: 243 RHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKL 279
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCV 190
G H++ L + S G G DGQ G G ++ P ++ G + I + D
Sbjct: 29 AGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHT 88
Query: 191 LAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
A S D+ V+ WG ++G++ + + TP+ + +G+ +I +A G S C +
Sbjct: 89 TAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIKQIACGDSHCLAVTMA 147
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V SWG G LG G + + +L+P + Q V+ + AG A+T
Sbjct: 148 GEVQSWGRNQNGQLGLG-----TTEDSLLPQKI----QSFEGVCVKMIAAGAEHTAAVTE 198
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG +YG LGLG D+ P KV +V G+K
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEK 234
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 47/319 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSF--VRIPLPVKHPSTQIKHLATGRAHTIVI 83
K++ G N LG++D + SF ++ L K + QIK ++ G H I
Sbjct: 96 KVYTWGKNKGGILGHYD----------ITSFNMIQPELVEKLENIQIKQISCGPFHMAAI 145
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEE------------DY-QGKWFCHNIADLEGEKIMDA 130
+ + +T+GN G+ G I Q+ DY +G + L G K
Sbjct: 146 SQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQV 205
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGL-----GHLNNQETPCLVRGEIEGERIVKLSS 185
CG T+ LTE+G+VYS G GQ G G+ ++ P L + I+ +
Sbjct: 206 SCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL-------QNIINIDC 258
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
AVS G V+ WGN+++GQ+ ++ + + P ++ G ++I++++ G +
Sbjct: 259 GQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGG-NKIINISCGDNFIAA 317
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
L++EG +++WGYG GQ +R + L+ Q K K+ + G +T
Sbjct: 318 LSNEGKLFTWGYGNDGQLGHSNR--------NDLYAPKQIEFKEKIIKVDCGGTHTAFLT 369
Query: 305 NFGHLYMWGKNQYGQLGLG 323
LY++G+ GQLG+G
Sbjct: 370 QNNQLYLFGRGNEGQLGIG 388
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 40/249 (16%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IK ++CG FTVV T +N +++ G + QLGY + GN
Sbjct: 200 IKCKQVSCGGQFTVVLT----ENGEVYSFGNSMKGQLGYQS-EETGN-----------FQ 243
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P K P Q I ++ G+ + ++ + +T+GNN GQ G + YQ + + +
Sbjct: 244 PKKIPDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGN---NQSIYQAR--PNQVT 298
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
G KI++ CG + L+ GK+++ G+G DGQ G + N+ P + + E+I
Sbjct: 299 GFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFK---EKI 355
Query: 181 VKLSSAVDC------VLAVSDKGDVFGWGNS---EYGQISESEMQI-STPRVLSQCKGVS 230
+K VDC L +++ +FG GN G+ ESE I +TP+++ K +
Sbjct: 356 IK----VDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKM- 410
Query: 231 RIVDVASGG 239
++VDV GG
Sbjct: 411 KVVDVTCGG 419
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 40/241 (16%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET----------- 167
+ LE +I CG H +++ G++Y+ WG LGH Q++
Sbjct: 124 VEKLENIQIKQISCGPFHMAAISQDGELYT--WGNKDHGKLGHEIQQKSNKVEIKRGNQN 181
Query: 168 ---------PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQ 216
P V+ + G + ++S + +++ G+V+ +GNS GQ+ E
Sbjct: 182 YDYAEGSMLPTKVQ-SLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETG 240
Query: 217 ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL 273
P+ + + I+++ G ++ G VY+WG +G LG + ++ +P
Sbjct: 241 NFQPKKIPD---LQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQA-RPNQ 296
Query: 274 IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
+ T FG +K+ ++ G A++N G L+ WG GQLG D P +
Sbjct: 297 V--TGFG------GNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQ 348
Query: 334 V 334
+
Sbjct: 349 I 349
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 16/140 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI +I+CG F + KLF G +D QLG H R + P
Sbjct: 304 KIINISCGDNFIAALSNEG----KLFTWGYGNDGQLG-HSNRND----------LYAPKQ 348
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ IK + G HT +T N + FG + GQ G G E + + +
Sbjct: 349 IEFKEKIIK-VDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFF 407
Query: 123 EGEKIMDAVCGQDHTLFLTE 142
+ K++D CG ++TL +TE
Sbjct: 408 KKMKVVDVTCGGEYTLAITE 427
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S + F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 LDCKKQTSPQLIKSLVGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTS-PQLIKSLVGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLV-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-VGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTE 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S + F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLVGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 19/268 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G HT ++T+N +TFG+N +GQ G G + K C + L+ EK C
Sbjct: 40 VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTK---TASKPSC--VKSLKHEKAKLVAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAVDCVL 191
G+ HTL T GKVY G G++GQ GLG + T P L+ + + + +S
Sbjct: 95 GRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFD---SKAISVSCGYYHTA 151
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-VASGGSACTMLNDEGL 250
V++ G+++ +G +EYG++ + + + + G+ V V GG T + + G
Sbjct: 152 VVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGA 211
Query: 251 VYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
VY++G G GQ G S PT F S E+ A IT GHL
Sbjct: 212 VYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTA------VITGKGHL 265
Query: 310 YMWGKNQYGQLGLG--TVEDQPFPLKVA 335
Y +G ++G+LGLG + +Q P KVA
Sbjct: 266 YTFGDGRHGKLGLGDESFTNQFRPFKVA 293
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 33/251 (13%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
FTFG + F E+ K++ N ++I CG +HT +TE+G++Y+
Sbjct: 15 FTFGKSKFA---------ENISSKFWIRN------DRICAVACGDEHTALVTENGRLYTF 59
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ GLGH P V+ ++ E+ ++ L + G V+ WG GQ
Sbjct: 60 GSNDWGQLGLGHTKTASKPSCVKS-LKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQ 118
Query: 210 --ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
+ E + + P +L S+ + V+ G ++ ++G +Y++G YG LG
Sbjct: 119 LGLGEDTTECTEPTLLD---FDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLG---- 171
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG- 323
+ + + S+ Q K KV+ ++ G AI G +Y +G GQLG G
Sbjct: 172 ----LNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGN 227
Query: 324 TVEDQPFPLKV 334
++ + P P +V
Sbjct: 228 SLLESPTPHRV 238
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I +ACG T + T+ N +L+ G N QLG + P S V+
Sbjct: 36 RICAVACGDEHTALVTE----NGRLYTFGSNDWGQLGLGHTKTASKP-----SCVKS--- 83
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+KH ++ +A GR+HT++ T + + +G S GQ G G E C L
Sbjct: 84 LKHEKAKL--VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTE-------CTEPTLL 134
Query: 123 E-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGER 179
+ K + CG HT +TE G +Y+ G G+ GL + L++ +TP V G E +
Sbjct: 135 DFDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVK 194
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
V A+++ G V+ +GN GQ+ + +P V R D
Sbjct: 195 FVVCGGG--HTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHR----VERFRDADCKH 248
Query: 240 SAC-----TMLNDEGLVYSWGYGLLGQ 261
++C ++ +G +Y++G G G+
Sbjct: 249 ASCGENFTAVITGKGHLYTFGDGRHGK 275
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 70/177 (39%), Gaps = 31/177 (17%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFG------CGLNSDSQLGYHDPRKKGNPLELVMSF 56
K ++CGY T V T+ D NL FG GLN +S L D
Sbjct: 139 KAISVSCGYYHTAVVTE--DGNLYTFGETEYGKLGLN-NSDLDSSD-------------- 181
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
P V ++K + G HT I ++ +TFGN + GQ G G E
Sbjct: 182 --TPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPT----P 235
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLV 171
H + A CG++ T +T G +Y+ G G G+ GLG NQ P V
Sbjct: 236 HRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKV 292
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 142/314 (45%), Gaps = 32/314 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D P +L R + + + S
Sbjct: 24 ACVFGSSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGS 83
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
H ++ T++ F +G+N + Q G G QG A+L +K+
Sbjct: 84 G---------PHILLATEDGELFAWGHNGYSQLGNGTTN----QGVAPVLVSANLLNKKV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG H++ LT++G+VY+ G+ GQ G G NQ TP V ++ + V +
Sbjct: 131 TEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LAV D G+V+GWG + GQ + + Q+ TP L +G+ + + SG + L
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQV-TPCRLVGLQGLC-VQQIVSGYAHSMAL 248
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF-- 300
DEGL+Y+WG YG LG G K S + P I K ++ + A T
Sbjct: 249 TDEGLLYAWGANTYGQLGTGNK-SNQLSPVQI---------LTEKERIVEIAACHSTHTS 298
Query: 301 GAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 299 AAKTQSGQVYMWGQ 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 118/259 (45%), Gaps = 19/259 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I IT+++ F FG N G G D + L G K++ G H L
Sbjct: 35 IYITNDDEVFVFGLNCSNCLGTG-----DSLSTIVPKKLDFLSGRKVVSLSYGSGPHILL 89
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
TE G++++ G Q G G N P LV + +++ +++ +A++D G+V
Sbjct: 90 ATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEV 149
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
+ WG + GQ+ S S TPR +S C V + G ++ + D G VY WGY
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNG 209
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ + P L G V+ +++G A+T+ G LY WG N
Sbjct: 210 NGQLGLGNNGNQ-----VTPCRLVGLQGL----CVQQIVSGYAHSMALTDEGLLYAWGAN 260
Query: 316 QYGQLGLGTVEDQPFPLKV 334
YGQLG G +Q P+++
Sbjct: 261 TYGQLGTGNKSNQLSPVQI 279
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 231 RIVDVASG-GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
++V ++ G G + ++G +++WG Y LG G ++ + P L+ + L +
Sbjct: 75 KVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNG-TTNQGVAPVLVSANLLNK----- 128
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
KV + G A+T+ G +Y WG N GQ+G G+ +QP P +V+
Sbjct: 129 --KVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRRVS 175
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 30/270 (11%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
HT+ IT + + +G NS G+ G GK + + I+ G H+L
Sbjct: 95 HTLAITKHGTVWGWGYNSKGEITEG--------GKNIARPVQINGLKDIVQVSTGLVHSL 146
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L +SG V+S G GQ LG+ NQ++ + E IV + + + LA+S+ G
Sbjct: 147 ALDQSGAVWSWGENIYGQ--LGNGTNQDSSIPTKVEFL-SNIVAIEAGAEHSLALSNDGK 203
Query: 199 VFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY- 256
V+ WG +E+GQ+ E + S PR++ K + I +A G + L+ +G +++WGY
Sbjct: 204 VWAWGRNEFGQLGNGETEKSNIPRLV---KNLENIEMIAGGDNHSLALDHDGAIWAWGYN 260
Query: 257 --GLLGQGPKVS-------RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
G +G G R + P L G + KV+ + AG A+T G
Sbjct: 261 SNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLY-----GKVKQVSAGIKHSTALTENG 315
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+Y WG N+YGQLG G+++D PL+ VG
Sbjct: 316 EVYAWGWNEYGQLGNGSMKDSKVPLRNNVG 345
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 58 RIPLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK-WF 115
I PV+ + I ++TG H++ + + +++G N +GQ G G Q+ K F
Sbjct: 122 NIARPVQINGLKDIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEF 181
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
NI +E G +H+L L+ GKV++ G GQ G G P LV+
Sbjct: 182 LSNIVAIE--------AGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNL- 232
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-------ESEMQISTPRVLSQCKG 228
E I ++ + LA+ G ++ WG + GQI E + Q+ R ++
Sbjct: 233 --ENIEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVK 290
Query: 229 VS----RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQ 281
++ ++ V++G T L + G VY+WG YG LG G SMK + +P
Sbjct: 291 LNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNG-----SMKDSKVP------ 339
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ N + + G A+ G +Y WG YGQLG GT
Sbjct: 340 LRNNVGRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGDGT 382
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLSSAVDCVLAVSD 195
+ L G V++ G GQ G N E G++ E +V L S +D LA++
Sbjct: 46 STILRSDGTVWTTGRNNVGQLG----NGTEKDSSYFGKVDELYDVVSLDSDMDHTLAITK 101
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+GWG + G+I+E I+ P Q G+ IV V++G L+ G V+SWG
Sbjct: 102 HGTVWGWGYNSKGEITEGGKNIARP---VQINGLKDIVQVSTGLVHSLALDQSGAVWSWG 158
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LG G S+ PT + S + ++ AG A++N G ++ W
Sbjct: 159 ENIYGQLGNGTNQDSSI-PTKVEFL----------SNIVAIEAGAEHSLALSNDGKVWAW 207
Query: 313 GKNQYGQLGLGTVEDQPFPLKV 334
G+N++GQLG G E P V
Sbjct: 208 GRNEFGQLGNGETEKSNIPRLV 229
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 24/148 (16%)
Query: 22 DKNLKLFGCGLNSDSQLG------YHDP---RKKGNPLELVMSFVRIPLPVKHPSTQIKH 72
D + ++ G NS+ Q+G Y R+K N E P+ + ++K
Sbjct: 249 DHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTE--------PVKLNGLYGKVKQ 300
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T+N + +G N +GQ G G +++ +N+ G I+D
Sbjct: 301 VSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKVP---LRNNV----GRSIIDIET 353
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLG 160
G H+ + ESG +Y+ G GQ G G
Sbjct: 354 GSYHSFAVDESGVIYAWGDATYGQLGDG 381
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 52/342 (15%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG--YHDPRKKGNPLELVMSFVR 58
+ +T +A G T + ++ ++ GLN QLG H R
Sbjct: 56 LTGVTAVAAGRHHTF----AVRQDGTVWAWGLNVWGQLGDGTHTERHT------------ 99
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
PV+ P T + +A GR HT ++ + + +G+N +GQ G G + H
Sbjct: 100 ---PVQVPGLTGVTAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADR--------H 148
Query: 118 NIADL-EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
L E + G+ HT + + G V++ G A GQ G G N+ TP V G +
Sbjct: 149 TPVQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPG-LT 207
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDV 235
G + +++ LAV G V+ WGN+ GQ+ + T R+ Q G++ + +
Sbjct: 208 G--VTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTY---TERLTPVQVPGLTGVTAI 262
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
++G S + +G V++WG +G LG G + R + P +P S V +
Sbjct: 263 SAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDR-LTPVQVPG----------LSGVTA 311
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G A+ G ++ WG N +GQLG GT D+ P++V
Sbjct: 312 IAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQV 353
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P T + +A GR HT + + + +G+N++GQ G G + +
Sbjct: 150 PVQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTN-----RLTPVQVP 204
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G + A G HTL + + G V++ G A GQ G G + TP V G + G +
Sbjct: 205 GLTGVTAIAA--GDYHTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPG-LTG--V 259
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+S+ +AV G V+ WG++ +GQ+ + + TP Q G+S + +A G
Sbjct: 260 TAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTP---VQVPGLSGVTAIAEGR 316
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +G V++WG +G LG G + R + P +P + V ++ AG
Sbjct: 317 RHTFAVRQDGTVWAWGLNFWGQLGDGTRSDR-LTPVQVPD----------LTSVTAIAAG 365
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N +GQLG GT D+ P++V
Sbjct: 366 DYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQV 403
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 24/277 (8%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P T + +A G +HT+ + + + +G+N +GQ G G Y + +
Sbjct: 400 PVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGT-----YTDRLTPVQVP 454
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
DL + G HTL + + G V + G+ A GQ G G + +P +V G
Sbjct: 455 DLT--SVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVF 512
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
L++ +AV G V+ WG + GQ+ + R+ Q G++ + +A+G +
Sbjct: 513 AALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGAT--IDRRIPVQIPGLAGVTAIAAGSA 570
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+G V+SWG YG LG G R + P +P + V ++ AG
Sbjct: 571 HTLAAGQDGAVWSWGANSYGQLGDGTTTHR-LSPVQVPG----------LTGVSAMAAGD 619
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G + WG+N +GQLG GT + P++V
Sbjct: 620 AHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQV 656
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 147/340 (43%), Gaps = 44/340 (12%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ +T IA G T+ A ++ ++ G NS QLG + +S V++P
Sbjct: 559 LAGVTAIAAGSAHTLAA----GQDGAVWSWGANSYGQLGDGTTTHR-------LSPVQVP 607
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
T + +A G AH++ + + +G NS+GQ G G + H +
Sbjct: 608 -----GLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQ--VHGL- 659
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ G HT+ L + G V++ G+ GQ G G + P V+G + +
Sbjct: 660 ----TGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD---V 712
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ +AV G V+ WG + +GQ+ + S STP + + GVS + A+G
Sbjct: 713 TAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTGVSAL---AAGY 769
Query: 240 SACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ + +G V++WG LG G R P + + V +L AG
Sbjct: 770 AHTVAVKQDGTVWAWGNNSGTQLGNGSSTDR-YTPVWVEG----------LTGVSALTAG 818
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A++ G + WG+N +GQ+G GT D+P P+ V +
Sbjct: 819 RFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPVDVVI 858
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 28/271 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + G HT+ + + A+ +GNN++GQ G G + + + L G +
Sbjct: 7 TGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-----RLTPVQVPGLTG--V 59
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
G+ HT + + G V++ G GQ G G + TP V G + G + +++
Sbjct: 60 TAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPG-LTG--VTAIAAGR 116
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
AVS G V+ WG++++GQ+ + + TP L + GV+ I A+G +
Sbjct: 117 RHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAI---AAGRRHTFAVR 173
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G V++WG +G LG G + +R + P +P + V ++ AG A+
Sbjct: 174 QDGTVWAWGDNAWGQLGDGTRTNR-LTPVQVPG----------LTGVTAIAAGDYHTLAV 222
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N GQLG GT ++ P++V
Sbjct: 223 RQDGTVWAWGNNALGQLGDGTYTERLTPVQV 253
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 26/278 (9%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P + + +A GR HT + + + +G N +GQ G G + + +
Sbjct: 300 PVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSD-----RLTPVQVP 354
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
DL + G HTL + + G V++ G GQ G G ++ TP V G + G +
Sbjct: 355 DLT--SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPG-LTG--V 409
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGG 239
+++ +A+ G V+ WG++ +GQ+ + T R+ Q ++ + +A+G
Sbjct: 410 TAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTY---TDRLTPVQVPDLTSVTAIAAGD 466
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +G V +WG YG LG G SRS P ++P L G F +L AG
Sbjct: 467 YHTLAVRQDGTVCAWGFNAYGQLGDGTS-SRSPSPVMVPG-LTGVTVF------AALAAG 518
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N GQLG G D+ P+++
Sbjct: 519 DSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQI 556
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G +SFGQ G G I+ E G F H+ + + CG +H++FL E G+V
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYG--FIHD------RNVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH + P L+ G + G+ IV ++ +A+SD+G VF WG
Sbjct: 56 YTCGLNTKGQ--LGHESEGSKPELI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 207 YGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ + ++ ++ PR++ + + I+ ++ G C L +G ++WG YG LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQT-ILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V AG A++ G ++ WGKN GQLG
Sbjct: 172 GKECPSQASPQRVKS-LDGI----PLAQVA---AGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L D+ P V +
Sbjct: 224 LSDERDRESPCHVKL 238
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L G+ I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH---ESEGSKPEL----IGALAGQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG+ H++ L++ G+V+S G G+DGQ GL + + T + ++ + I+++S
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G F WG + YGQ+ E Q S RV S G+ + VA+GG+ L+
Sbjct: 149 CLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIP-LAQVAAGGAHSFALS 206
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V+ WG GQ G R + L Q KV + G +T
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ +G+ EL+ +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---ESEGSKPELIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 83 ---GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + +
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVSQIACGRHHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG D R + +P + +R S ++ +++ G HT V+T +
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCH--VKLLR--------SQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G G GQ G GH N + P V+G
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TD++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 17/266 (6%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G H+ +IT++ +TFG+N +GQ G G ++ G C + L+ E +
Sbjct: 40 HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPG---C--VKSLKQEGVNLVA 94
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG+ HT+ T++G++YS G G+DGQ G G +P L+ + ++ LS+ D
Sbjct: 95 CGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN--LPEQKYKLLSAGTDHSA 152
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G ++ WG+ GQ+ + TP+ L K S + V+ G ++ D+G
Sbjct: 153 ALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL---KFHSSVSWVSCGYYHTAIVTDDGK 209
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
+Y++G G+ ++ T P +H + K++ + G I++ G+LY
Sbjct: 210 LYTFGEKEFGKLGLTEDQLEDTTTP-----KHVESITEKIKLVACGGAHTAVISDVGNLY 264
Query: 311 MWGKNQYGQLGLG-TVEDQPFPLKVA 335
+G +GQLG G ++ P KVA
Sbjct: 265 TFGDGMHGQLGNGPSLLQLSLPQKVA 290
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 29/259 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG T+V TK+ +L+ G SD QLG D + +P + + P
Sbjct: 93 VACGRSHTIVCTKAG----RLYSFGAGSDGQLGTGDAQCATSPQLINL-----------P 137
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ K L+ G H+ +T + + +G+ S GQ G G + + H+
Sbjct: 138 EQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHS-------S 190
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL--GHLNNQETPCLVRGEIEGERIVKLS 184
+ CG HT +T+ GK+Y+ G G+ GL L + TP V E ++V
Sbjct: 191 VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACG 250
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
A V +SD G+++ +G+ +GQ+ S +Q+S P+ +++ + V+ G +
Sbjct: 251 GAHTAV--ISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLS-EHKCKYVSCGDNHT 307
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
++ ++G +Y++G G G+
Sbjct: 308 AVITEKGAMYTFGDGRHGK 326
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 31/248 (12%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
I + FTFG + F ++ K++ N +K M CG +H+ +TE
Sbjct: 9 IPETGAIFTFGKSRFA---------DNLPSKFWIRN------DKAMHISCGDEHSAIITE 53
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
SG++Y+ G GQ GLGH+ P V+ ++ E + ++ + + G ++ +
Sbjct: 54 SGRLYTFGSNDWGQLGLGHMKPTTKPGCVK-SLKQEGVNLVACGRSHTIVCTKAGRLYSF 112
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G GQ+ + Q +T P++++ + +++ + SA L +G +Y WG G GQ
Sbjct: 113 GAGSDGQLGTGDAQCATSPQLINLPEQKYKLLSAGTDHSAA--LTTDGTLYMWGSGSEGQ 170
Query: 262 -GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G + S++ P L +F+ S V + G +T+ G LY +G+ ++G+L
Sbjct: 171 LGLGNTDSVE---TPKEL----KFH--SSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKL 221
Query: 321 GLGTVEDQ 328
GL EDQ
Sbjct: 222 GL--TEDQ 227
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CGY T + T + KL+ G +LG + + + P V+
Sbjct: 194 VSCGYYHTAIVTD----DGKLYTFGEKEFGKLGLTEDQ---------LEDTTTPKHVESI 240
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEG 124
+ +IK +A G AHT VI+D +TFG+ GQ G G ++Q Q +A L
Sbjct: 241 TEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQ------KVARLSE 294
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLV 171
K CG +HT +TE G +Y+ G G G+ G+ + N PC V
Sbjct: 295 HKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEEDFCNIFKPCKV 343
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
I ++ + +S + +++ G ++ +G++++GQ+ M+ +T + +
Sbjct: 33 IRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNL 92
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
VA G S + G +YS+G G GQ + P LI P+ K +
Sbjct: 93 VACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINL---------PEQKYKL 143
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L AG A+T G LYMWG GQLGLG + P ++
Sbjct: 144 LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL 185
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H ++ T++ F +G+N + Q G G QG A L K+ + CG H++
Sbjct: 86 HILLATEDGELFAWGHNGYSQLGNGTTN----QGVAPVLVSATLLNRKVTEVACGSHHSM 141
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT+SG+VY+ G+ GQ G G NQ TP V ++ V + LAV D G+
Sbjct: 142 ALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGE 201
Query: 199 VFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+GWG + GQ + + Q+ TP L +G+ + V SG + L DEGL+Y+WG
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQL-TPCRLVALQGLC-VQQVVSGYAHSLALTDEGLLYAWGA 259
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--GAITNFGHLYM 311
YG LG G K S + P I K ++ + A T A T G +YM
Sbjct: 260 NTYGQLGTGNK-SNQLSPVQI---------MTEKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 312 WGK 314
WG+
Sbjct: 310 WGQ 312
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I IT ++ + FG N G G D Q + L G K++ G
Sbjct: 29 TSANEAIYITSDDEVYAFGLNCSNCLGTG-----DSQCTIVPKKVDILSGRKVVSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G++++ G Q G G N P LV + ++ +++ +A+
Sbjct: 84 GPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+D G+V+ WG + GQ+ S S TPR +S C V + G ++ + D G VY
Sbjct: 144 TDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P L V+ +++G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPCRLVALQGLC----VQQVVSGYAHSLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q P+++ ++
Sbjct: 255 YAWGANTYGQLGTGNKSNQLSPVQIMTEKER 285
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G N SQLG + P+ + + + + ++ +A G H++ +TD
Sbjct: 95 ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLL---------NRKVTEVACGSHHSMALTD 145
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ + +G N+ GQ G G + + + L+ + VCGQ +L + ++G+
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTANQPTPRR----VSSCLQNRVAVSIVCGQTSSLAVVDNGE 201
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY G+ +GQ GLG+ NQ TPC + ++G + ++ S LA++D+G ++ WG +
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLTPCRLVA-LQGLCVQQVVSGYAHSLALTDEGLLYAWGAN 260
Query: 206 EYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML--NDEGLVYSWG 255
YGQ+ Q+S +++++ RIV++A+ S T G VY WG
Sbjct: 261 TYGQLGTGNKSNQLSPVQIMTE---KERIVEIAACHSTHTSAAKTQSGQVYMWG 311
>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
Length = 394
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 134/304 (44%), Gaps = 29/304 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G NS QLG + P +LV F + T IK ++ G H+ +TD
Sbjct: 10 RLFAWGANSYGQLGLGTTQDSLLP-QLVTGF-------PNHETVIKSISAGGGHSAAVTD 61
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ G NS GQ G+ D C L K+ CG D TL LT+SG+
Sbjct: 62 AGHVYVCGQNSEGQL--GLNHTTDVTHFSLCPGTLTLRVSKV---ACGWDFTLILTDSGE 116
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+ SCG Q G +E C+ R +I+ +++ +++ + VLA++D G +F WG+
Sbjct: 117 LLSCGANTYSQLGRA---GEERSCIPRPLDIQKRKVLDVAAGLRHVLALTDNGQIFQWGS 173
Query: 205 SEYGQISESEMQISTPRVLSQCK-----GVSRIVD--VASGGSACTMLNDEGLVYSWGYG 257
Q P V S + G++ I VA+G C L+D G VY WG
Sbjct: 174 GLASHARRFSQQKPIPAVYSSTEPCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSN 233
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ P L+ H F + ++ ++++G A T+ G ++ WG+ Y
Sbjct: 234 KHGQ----LLHSDPFLLHPHRVQAHLFLGE-RIVAVVSGWTHLVAQTDTGKVFTWGRANY 288
Query: 318 GQLG 321
QLG
Sbjct: 289 SQLG 292
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 60/359 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I+ G G + T + ++ CG NS+ QLG N V F P +
Sbjct: 46 IKSISAGGGHSAAVTDAG----HVYVCGQNSEGQLGL-------NHTTDVTHFSLCPGTL 94
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ++ +A G T+++TD+ + G N++ Q GR EE + D++
Sbjct: 95 ---TLRVSKVACGWDFTLILTDSGELLSCGANTYSQLGR--AGEE----RSCIPRPLDIQ 145
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADG-------QTGLGHLNNQETPCLVRGE-- 174
K++D G H L LT++G+++ G G Q + + + PC V G
Sbjct: 146 KRKVLDVAAGLRHVLALTDNGQIFQWGSGLASHARRFSQQKPIPAVYSSTEPCAVPGMNG 205
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIV 233
I G+ + + + CV A+SD GDV+ WG++++GQ+ S+ + P RV + RIV
Sbjct: 206 ICGKMVA--AGSYHCV-ALSDAGDVYVWGSNKHGQLLHSDPFLLHPHRVQAHLFLGERIV 262
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPK-------------VSRSMKPTLIPST 277
V SG + D G V++WG Y LG+ P +S + P IPS
Sbjct: 263 AVVSGWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTGLHETVLQGISANQLPAWIPS- 321
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
L G Q S+ + G G LY WG N++G G G+ + P P V +
Sbjct: 322 LTGSSQVACGSEHNLAVCG----------GLLYSWGWNEHGMCGNGSETNVPVPTLVGI 370
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 46/296 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++++ +ACG+ FT++ T S + L CG N+ SQLG + IP
Sbjct: 96 LRVSKVACGWDFTLILTDSGE----LLSCGANTYSQLGRAGEERS-----------CIPR 140
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P+ ++ +A G H + +TDN F +G+ R Q++ +
Sbjct: 141 PLDIQKRKVLDVAAGLRHVLALTDNGQIFQWGSG-LASHARRFSQQKPIPAVYSSTEPCA 199
Query: 122 LEGEKIMDAVCGQD------HTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGE 174
+ G M+ +CG+ H + L+++G VY WG++ L H + P V+
Sbjct: 200 VPG---MNGICGKMVAAGSYHCVALSDAGDVYV--WGSNKHGQLLHSDPFLLHPHRVQAH 254
Query: 175 I-EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-----------ISESEMQ-ISTPR 221
+ GERIV + S ++A +D G VF WG + Y Q + E+ +Q IS +
Sbjct: 255 LFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTGLHETVLQGISANQ 314
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLI 274
+ + ++ VA GS + GL+YSWG+ G+ G G + + + PTL+
Sbjct: 315 LPAWIPSLTGSSQVAC-GSEHNLAVCGGLLYSWGWNEHGMCGNGSETNVPV-PTLV 368
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+++WG YG LG G S+ P L+ T F H+ + ++S+ AG A+T+ G
Sbjct: 11 LFAWGANSYGQLGLG-TTQDSLLPQLV--TGFPNHE----TVIKSISAGGGHSAAVTDAG 63
Query: 308 HLYMWGKNQYGQLGLGTVED 327
H+Y+ G+N GQLGL D
Sbjct: 64 HVYVCGQNSEGQLGLNHTTD 83
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G H V+TD FT+G FG+ G G + +G I LEG +
Sbjct: 273 VQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHG-----NREGLESPRRIEALEGIPCVQ 327
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG +T +T SG++Y+ G G +G+ GLG + ++ TP V G + V S C
Sbjct: 328 VACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSC 387
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS----RIVDVASGGSACTML 245
VL + +G V+ +G EY + E + PR++ G S R + V GG L
Sbjct: 388 VL--TREGTVYAFGKHEYTGHGDHE-DVLDPRLIPTFSGGSGALVRQISVGPGGYHTMAL 444
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL--------IAGP 297
+G VY+WG+ + Q + S +P + G + VESL +AG
Sbjct: 445 TCQGQVYAWGHNRVAQ-LGIGNSFT---VPRNMEGAYFLPSPQLVESLVGMNIVKVVAGW 500
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G LY+ G+N GQLGLG+ Q FP
Sbjct: 501 GHSAALTVDGQLYVCGRNYQGQLGLGS--PQGFP 532
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G + CG H LT+ G++++ G G G+ G G+ E+P + +EG
Sbjct: 265 VQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEA-LEGI 323
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVAS 237
V+++ AV+ G+++ WG E G++ + ++ S+ +G+ S++ +V +
Sbjct: 324 PCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGD--VADRHTPSRVEGLHSKVKEVYA 381
Query: 238 GGSACTMLNDEGLVYSWG-YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G +L EG VY++G + G G + P LIP+ G V + G
Sbjct: 382 GSVHSCVLTREGTVYAFGKHEYTGHGDH-EDVLDPRLIPTFSGGSGAL-----VRQISVG 435
Query: 297 PCTFG--AITNFGHLYMWGKNQYGQLGLG 323
P + A+T G +Y WG N+ QLG+G
Sbjct: 436 PGGYHTMALTCQGQVYAWGHNRVAQLGIG 464
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHN---IADLEGEKIMDAVCG 133
HT+ +T + +G+N Q G G + +G +F + + L G I+ V G
Sbjct: 440 HTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAG 499
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGH-----LNNQETP-----CLVRGEIEGERIVKL 183
H+ LT G++Y CG GQ GLG N + P CL+ ++ +I ++
Sbjct: 500 WGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLID-RLQHLKIKQI 558
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ + +AV++ G+V+ +G + GQ+ ES + PR++ K R + + G+ C
Sbjct: 559 ACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNC 618
Query: 243 TMLNDEGLVY 252
T++ G+ +
Sbjct: 619 TLVLAGGVAF 628
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 29/127 (22%)
Query: 219 TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIP 275
+P V+ G+S + V GG +L D G +++WG +G LG G +
Sbjct: 261 SPVVVQGLLGLS-VQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNR----------- 308
Query: 276 STLFGQHQFNPKSKVESLIAGPCT--------FGAITNFGHLYMWGKNQYGQLGLGTVED 327
++E+L PC A+T G LY WG + G+LGLG V D
Sbjct: 309 ------EGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVAD 362
Query: 328 QPFPLKV 334
+ P +V
Sbjct: 363 RHTPSRV 369
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR-----KKGNPLELVMSF 56
+ I + G+G + T +L+ CG N QLG P+ ++G+P +
Sbjct: 491 MNIVKVVAGWGHSAALTVDG----QLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCL 546
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+ + +IK +A G H++ + +N ++FG GQ G ED F
Sbjct: 547 ID-----RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTRED-----FP 596
Query: 117 HNIADLEGEK--IMDAVCGQDHTLFLT 141
+ L+ + IM CG + TL L
Sbjct: 597 RLVQALKSTRREIMHVACGNNCTLVLA 623
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 109/287 (37%), Gaps = 52/287 (18%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +ACG+ +T T S + L+ G + +LG D + P
Sbjct: 323 IPCVQVACGFAYTAAVTASGE----LYTWGAGENGRLGLGDVADRHTPSR---------- 368
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V+ +++K + G H+ V+T + FG + + G G ED +
Sbjct: 369 -VEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHG--DHEDVLDPRLIPTFSG 423
Query: 122 LEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
G + G HT+ LT G+VY+ G Q G+G N+ P +EG
Sbjct: 424 GSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIG--NSFTVPR----NMEGAY 477
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEY----------GQISESEMQISTPRVLSQCKGV 229
+ V+ ++ ++ V GWG+S G+ + ++ + +P+ Q +
Sbjct: 478 FLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERG 537
Query: 230 S---------------RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+I +A GG + + G V+S+G G GQ
Sbjct: 538 HPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQ 584
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ--EEDYQGKWFCHN---IADLEG 124
I + G H+ +T + + G N GQ G G Q ++ +G F + I L+
Sbjct: 493 IVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQH 552
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER-IVKL 183
KI CG +H++ + E+G+V+S G G GQ G ++ P LV+ R I+ +
Sbjct: 553 LKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHV 612
Query: 184 SSAVDCVLAVS 194
+ +C L ++
Sbjct: 613 ACGNNCTLVLA 623
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S + F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLVGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIR---VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S + F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLVGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + A CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+VY+ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV D G+V+GWG + GQ + + Q++ RV S C ++ + G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC-----VLQIVCGYAH 244
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--G 296
L DEGL+Y+WG YG LG G K S + P I K +V + A
Sbjct: 245 TLALTDEGLLYAWGANTYGQLGTGNK-SNLLSPAQI---------MVEKERVVEIAACHS 294
Query: 297 PCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 295 AHTSAAKTQGGHVYMWGQ 312
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +T N+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTHNDEVFVFGLNCSNCLGTG-----DNQSTIVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 84 GPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+V+ WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHSVC----VLQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGNKSNLLSPAQIMVEKER 285
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 21/239 (8%)
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
G F++G NS+GQ G G +D + K I + KI+D G HTL LT+ G +
Sbjct: 25 RGMFSWGANSYGQLGLG---HQDDKSK--PEKILKIPDGKIVDVTGGGGHTLLLTDCGAI 79
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
YSCGW + GQ GLGH +N V I+ ++K++ D LA+++ GD++ WG +
Sbjct: 80 YSCGWNSKGQLGLGHTDNLS----VFKRIDHLPPVIKVTCGWDFCLAITEVGDLYAWGCN 135
Query: 206 EYGQISESEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GP 263
+GQ+ E+ S + ++ + SR + +A+G + ++G ++SWG GQ G
Sbjct: 136 VFGQLGIPEID-SFTAIPTKIQIFSRNVTSIAAGLRHSLAVTNDGKLWSWGSARKGQLGN 194
Query: 264 KVSRSMKPTL--IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
S++ L +P Q + + S+ +G A+T G++Y+WG N++ QL
Sbjct: 195 DQSKTGYQLLQRVPK------QVHKLENISSVSSGSYHSTALTACGNMYLWGSNKHNQL 247
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 40/313 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F G NS QLG K P +++ K P +I + G HT+++TD
Sbjct: 27 MFSWGANSYGQLGLGHQDDKSKPEKIL----------KIPDGKIVDVTGGGGHTLLLTDC 76
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
++ G NS GQ G G + I L ++ CG D L +TE G +
Sbjct: 77 GAIYSCGWNSKGQLGLGHTDNLSVFKR-----IDHL--PPVIKVTCGWDFCLAITEVGDL 129
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+ G GQ G+ +++ T + +I + +++ + LAV++ G ++ WG++
Sbjct: 130 YAWGCNVFGQLGIPEIDS-FTAIPTKIQIFSRNVTSIAAGLRHSLAVTNDGKLWSWGSAR 188
Query: 207 YGQISESEMQIS---TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-------- 255
GQ+ + + RV Q + I V+SG T L G +Y WG
Sbjct: 189 KGQLGNDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNMYLWGSNKHNQLT 248
Query: 256 ---YGLLGQGPKVSRSM--KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
G++ G + PT + LFG Q + ++ +G AIT+ +++
Sbjct: 249 NSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQ------ILAVHSGWTHILAITHDSNVF 302
Query: 311 MWGKNQYGQLGLG 323
WG+N Y QLG+
Sbjct: 303 GWGRNDYSQLGIS 315
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 46/277 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG+ F + T+ D L+ G N QLG + + SF IP +
Sbjct: 110 VIKVTCGWDFCLAITEVGD----LYAWGCNVFGQLGIPE----------IDSFTAIPTKI 155
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL- 122
+ S + +A G H++ +T++ +++G+ GQ G ++ G +
Sbjct: 156 QIFSRNVTSIAAGLRHSLAVTNDGKLWSWGSARKGQLG----NDQSKTGYQLLQRVPKQV 211
Query: 123 -EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-----------GHLNNQETPCL 170
+ E I G H+ LT G +Y WG++ L G P
Sbjct: 212 HKLENISSVSSGSYHSTALTACGNMYL--WGSNKHNQLTNSVQGVVQSGGSSKEDILPVP 269
Query: 171 VRGEIE---GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-------EMQISTP 220
+ +E G +I+ + S +LA++ +VFGWG ++Y Q+ S + ++ P
Sbjct: 270 TKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKP 329
Query: 221 RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
+ L K + +I A G L+D+ V +WG+
Sbjct: 330 KELVILKDIKQI---ACGSEHNLALSDDNKVLAWGWN 363
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C++ + +F WG + YGQ+ + + ++L G +IVDV GG +L
Sbjct: 17 CIVGTCLQRGMFSWGANSYGQLGLGHQDDKSKPEKILKIPDG--KIVDVTGGGGHTLLLT 74
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-- 301
D G +YS G+ G LG G + S+ F + +I C +
Sbjct: 75 DCGAIYSCGWNSKGQLGLGHTDNLSV--------------FKRIDHLPPVIKVTCGWDFC 120
Query: 302 -AITNFGHLYMWGKNQYGQLGLGTVED-QPFPLKVAV 336
AIT G LY WG N +GQLG+ ++ P K+ +
Sbjct: 121 LAITEVGDLYAWGCNVFGQLGIPEIDSFTAIPTKIQI 157
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV----QEEDYQGKWFCHNIADLEG 124
QI + +G H + IT + F +G N + Q G + ++D + D
Sbjct: 281 QILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKD--- 337
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
I CG +H L L++ KV + GW G G G N TP ++ ++ E+I
Sbjct: 338 --IKQIACGSEHNLALSDDNKVLAWGWNEHGSCGNGKEENVLTPQVI-DDLAKEKI 390
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV +A G L+ V+SWG +G LG G
Sbjct: 114 GQLGLPGTEEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
++ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 FELKSQSAPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRFVP 233
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G ++ GQ G + E+Y NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG--LPGTEEYIK--VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG L +Q P L++ + G +
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRFVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TD++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLDALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 26/255 (10%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G QG +L +++
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGLAPIQVCTNLLIKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K L P+ H K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-----NNLLSPA-----HIMVEKERVIEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 1419
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 28/280 (10%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V+ Q +A G H++ + ++ +GNN GQ G G + + +
Sbjct: 544 PVRVQGLKGQASSVAAGGTHSLALLQDKSVAAWGNNDHGQLGDGSFTNRNTAAT--VNGL 601
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+D+ G G+ H+L + G V++ G + GQ G G L + TP V+G +
Sbjct: 602 SDIVG-----IAAGERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKGL---SQ 653
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+ K+++ D LA++ G V+ WGN++ GQ+ + + VL G+S + V+ G
Sbjct: 654 VTKIAAGGDTSLAITADGKVWAWGNNQDGQLGDGTTNNQSTPVL--VPGLSDVTTVSVGW 711
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ C L +G V++WG +LG G + PT Q S V ++ AG
Sbjct: 712 THCLALKSDGGVWAWGDNSQSILGTGSADAYCAVPT----------QVKGLSGVTAISAG 761
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTV---EDQPFPLK 333
A+TN G WG+N + QLG G+ E P +K
Sbjct: 762 NQFSLAMTNQGVAEAWGRNDFNQLGDGSAAKFESTPVQIK 801
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 28/274 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EK 126
+ I +A G H++ + + + +G+NS GQ G G ++E K ++G +
Sbjct: 602 SDIVGIAAGERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVK--------VKGLSQ 653
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ G D +L +T GKV++ G DGQ G G NNQ TP LV G + + +S
Sbjct: 654 VTKIAAGGDTSLAITADGKVWAWGNNQDGQLGDGTTNNQSTPVLVPGLSD---VTTVSVG 710
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+ G V+ WG++ + V +Q KG+S + +++G +
Sbjct: 711 WTHCLALKSDGGVWAWGDNSQSILGTGSADAYC-AVPTQVKGLSGVTAISAGNQFSLAMT 769
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV--ESLIAGPCTFG 301
++G+ +WG + LG G P I + P V +S+ AG +
Sbjct: 770 NQGVAEAWGRNDFNQLGDGSAAKFESTPVQIKNM--------PLVPVVDQSISAG--GYH 819
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ WG N GQLGLG E P ++
Sbjct: 820 ALCGTLGTRSWGYNASGQLGLGITEHISIPEAIS 853
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
G +I +S+ LA+ G V+GWG G + ++ ++ V Q K ++ ++ +
Sbjct: 47 SGAKITAISANEAYALAMKSDGTVWGWGT---GPLGNNDADSNSALVPVQAKNLTDVIAI 103
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
++GG L ++G V+SWG YG LG G +R+ P +PS S + +
Sbjct: 104 SAGGDVALALKNDGTVWSWGSNQYGELGDGSTTNRN-SPAPVPSL----------SGISA 152
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G A+ N G ++ WG NQ G LG GT +D+ P++++
Sbjct: 153 IATGYSYCLALKNDGTVWAWGSNQNGALGDGTTDDRKTPVQIS 195
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-LGHLNNQETPCLVRGEIEG-ERI 180
G KI + + L + G V+ GWG TG LG+ + LV + + +
Sbjct: 47 SGAKITAISANEAYALAMKSDGTVW--GWG----TGPLGNNDADSNSALVPVQAKNLTDV 100
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+ +S+ D LA+ + G V+ WG+++YG++ + S ++P + G+S I A+G
Sbjct: 101 IAISAGGDVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVPSLSGISAI---ATGY 157
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
S C L ++G V++WG G LG G R Q + S V S+ A
Sbjct: 158 SYCLALKNDGTVWAWGSNQNGALGDGTTDDRKTP-----------VQISGLSGVVSIAAN 206
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+ AI + G ++ WG N GQLG G +DQ P+ + K
Sbjct: 207 YHSSYAIKSDGTVWAWGLNDQGQLGDGLSKDQWLPINTGLSNIK 250
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 132 CGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H+L E Y WG++ GQ G G + TP V+G ++G+ +
Sbjct: 510 AGDSHSLSAGE----YVMAWGSNTYGQLGDGTNIQRSTPVRVQG-LKGQASSVAAGGTHS 564
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+ + DK V WGN+++GQ+ + + + G+S IV +A+G + +G
Sbjct: 565 LALLQDK-SVAAWGNNDHGQLGDGSF--TNRNTAATVNGLSDIVGIAAGERHSLAVQSDG 621
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WG G LG G RS P + G S+V + AG T AIT
Sbjct: 622 SVWAWGDNSSGQLGDGTLKERST-----PVKVKGL------SQVTKIAAGGDTSLAITAD 670
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG NQ GQLG GT +Q P+ V
Sbjct: 671 GKVWAWGNNQDGQLGDGTTNNQSTPVLV 698
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 25/275 (9%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ K+ T + ++ G + + ++ +++G+N +G+ G G +
Sbjct: 90 VPVQAKN-LTDVIAISAGGDVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAP----- 143
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G I G + L L G V++ G +G G G ++++TP + G + G
Sbjct: 144 VPSLSG--ISAIATGYSYCLALKNDGTVWAWGSNQNGALGDGTTDDRKTPVQISG-LSG- 199
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+V +++ A+ G V+ WG ++ GQ+ + +S + L G+S I + G
Sbjct: 200 -VVSIAANYHSSYAIKSDGTVWAWGLNDQGQLGDG---LSKDQWLPINTGLSNIKSLIPG 255
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G + T++ +G ++ G + G VS ++ TL+ Q S V S AG
Sbjct: 256 GFSLTVIKQDGSLWQLGLSVNG---SVSNDVEYTLV--------QVPGLSHVVSAAAGQN 304
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
F AI ++ WG G + TV QP ++
Sbjct: 305 NFMAILQDQTVWTWGNALPGYGSMNTVTPQPVQVQ 339
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 25/266 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +ATG H++ IT + +T G N Q GR + KW + LE +
Sbjct: 36 ELAFVATGYYHSLAITRSGTVYTTGKNDRRQLGRS-----GDEHKW--ARVTPLETITAV 88
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG---ERIVKLSS 185
G D ++ + +GKVY+ G G GQ GLG ET V ++G ++ ++
Sbjct: 89 AGAVGLDFSVVVDSTGKVYTWGGGERGQLGLGR-EAMETGSRVPRPVKGLGNAFVISVAC 147
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG GQ+ + + + +P V++ +G +V VA+G +
Sbjct: 148 GTRHCLALTRDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKG-VVSVAAGSTYSLA 206
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ VY++G G LG G +R +PTL+ +F +V + AG
Sbjct: 207 VTGADQVYAFGSNSKGQLGVGDTTAR-FRPTLV--------RFLDGKQVCHVTAGDFHTL 257
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVED 327
A T GHLY WG NQ+GQLGLG+ D
Sbjct: 258 ARTRTGHLYAWGSNQWGQLGLGSEAD 283
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 28/278 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH-DPRK--KGNPLELVMSFVRIPLPV 63
+A GY ++ T+S ++ G N QLG D K + PLE + +
Sbjct: 40 VATGYYHSLAITRSG----TVYTTGKNDRRQLGRSGDEHKWARVTPLETITAVAG----- 90
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
A G ++V+ +T+G GQ G G +E G + L
Sbjct: 91 ----------AVGLDFSVVVDSTGKVYTWGGGERGQLGLG--REAMETGSRVPRPVKGLG 138
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++ CG H L LT G+V+S G GADGQ G G ++ +P ++ ++ G+ +V +
Sbjct: 139 NAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQFVSRHSPEVI-ADLRGKGVVSV 197
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
++ LAV+ V+ +G++ GQ+ + L + ++ V +G
Sbjct: 198 AAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTTARFRPTLVRFLDGKQVCHVTAGDFHTL 257
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTL 278
G +Y+WG +G LG G + PT I L
Sbjct: 258 ARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTEITHIL 295
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 65
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 66 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 122
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 123 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 181
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 182 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 230
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 231 LGLNDENDRYVP 242
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 44 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 96
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 97 AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVACGY 155
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+ +
Sbjct: 156 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 214 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHTA 264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 265 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 297
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 44 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 87
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 88 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 139
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 140 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 198
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 199 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 257
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 258 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 303
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 304 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 350
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 199 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 248
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 249 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 299
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 300 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 352
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVQDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E I PR + + +IV +A G L+ V+SWG +G LG G
Sbjct: 114 GQLGLPGTEEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
++ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 FELKSQSAPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRFVP 233
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVQDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + I ++ G AHT+ + D + +G ++ GQ G + E+Y NI L
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG--LPGTEEYIK--VPRNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L++ +V+S G GQ GLG L +Q P L++ + G +
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL-GIPFM 193
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ ++ G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYICCGED 252
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L EG V+++G G GQ S S H+ NP+ KV L+ T
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGSIVTQ 298
Query: 301 GA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A + + G +Y +G GQLG G+ ++ P V
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRFVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 41/319 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N +S LG P + P ++ SF I P+ T + +A G HT+ + N
Sbjct: 117 VWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPL----TDVVAIAAGTHHTLALKSN 172
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV---CGQDHTLFLTES 143
+++G NS GQ G G + + A ++ + DAV G H+L L +
Sbjct: 173 GTVWSWGLNSSGQLGNGTLATQS----------AAVQAVNLTDAVAISAGAAHSLALRAN 222
Query: 144 GKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V S WGA+ GQ G G +P V G I L++ + LA+ G V
Sbjct: 223 GAVVS--WGANTYGQLGNGTTTTSASPVGVSGL---NNIKSLAAGGNHSLALKSDGTVTA 277
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG + YGQ+ + + +P +S GV+ + S A N G+++ WG YG
Sbjct: 278 WGYNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSN--GVIWGWGLNTYG 335
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG KV+RS T++ + S ++ + G + G ++ WG N Y
Sbjct: 336 GLGNNTKVNRSTPGTILLT-----------SGLQGVAGGAQHTIYVKGDGTVWAWGSNTY 384
Query: 318 GQLGLGTVEDQPFPLKVAV 336
GQ+G GT + P++++
Sbjct: 385 GQIGDGTPLRRLTPVQLST 403
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK LA G H++ + + +G N++GQ G G ++ L G +
Sbjct: 255 NIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATANVLSPIA-----VSTLSGVTAV 309
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETP--CLVRGEIEGERIVKLS 184
A H + + +G ++ GWG + GLG+ N+ TP L+ ++G ++
Sbjct: 310 SAGVSHSHAIG-SSNGVIW--GWGLNTYGGLGNNTKVNRSTPGTILLTSGLQG-----VA 361
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ V G V+ WG++ YGQI + + ++ TP LS G I+ VA+G +
Sbjct: 362 GGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTG---IIAVAAGANHSL 418
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L G V++WG +G LG G +RS+ PT +P+ + + +L AG
Sbjct: 419 ALAANGTVFAWGRNNHGQLGDGSTTNRSL-PTQVPN----------LTGIVALAAGATHS 467
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G +Y WG+N GQLG T D+ P+ V
Sbjct: 468 LALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAV 501
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 139/357 (38%), Gaps = 75/357 (21%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N+ Q+G P ++ P++L T I +A G H++ + N
Sbjct: 376 VWAWGSNTYGQIGDGTPLRRLTPVQL------------STLTGIIAVAAGANHSLALAAN 423
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F +G N+ GQ G G + +L G I+ G H+L L G V
Sbjct: 424 GTVFAWGRNNHGQLGDGSTTNRS-----LPTQVPNLTG--IVALAAGATHSLALRFDGTV 476
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+ G GQ G ++ +P V E++V +S+ + LA+ G F WG+ E
Sbjct: 477 YAWGRNHLGQLGDETCTDRLSPVAVH---YLEKVVAISAGDNHSLAIHQNGTAFAWGSDE 533
Query: 207 YGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
+GQ+ S S +P ++SQ G+ + + +A+G + +L G ++ G YG LG
Sbjct: 534 HGQLCDSGSGSGRFSP-LISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGD 592
Query: 262 GPKVSRSM-----------------------------------------------KPTLI 274
G +S + T+
Sbjct: 593 GTTTDKSAPVPITTLTNAARLAAGGNTSAALTTNGTVSTWGLNSSGQLGDNTTASRTTIA 652
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
P S V SL AG A+ G+++ WG N GQ+G GT+ ++P P
Sbjct: 653 PVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRPLP 709
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 139/324 (42%), Gaps = 51/324 (15%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
N ++G GLN+ LG + + P ++++ + ++ +A G HTI
Sbjct: 321 SSNGVIWGWGLNTYGGLGNNTKVNRSTPGTILLT------------SGLQGVAGGAQHTI 368
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+ + + +G+N++GQ G G + ++ L G I+ G +H+L L
Sbjct: 369 YVKGDGTVWAWGSNTYGQIGDGTPLR-----RLTPVQLSTLTG--IIAVAAGANHSLALA 421
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
+G V++ G GQ G G N+ P V + G IV L++ LA+ G V+
Sbjct: 422 ANGTVFAWGRNNHGQLGDGSTTNRSLPTQVP-NLTG--IVALAAGATHSLALRFDGTVYA 478
Query: 202 WGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WG + GQ+ + + T R+ + ++V +++G + ++ G ++WG G
Sbjct: 479 WGRNHLGQLGD---ETCTDRLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHG 535
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPK-SKVESLIAGPCTFGAITNFGHLYM-------W 312
Q + + G +F+P S++ ++ G G H + W
Sbjct: 536 Q------------LCDSGSGSGRFSPLISQIPGIVKG---IGIAAGANHTLLLEANGTAW 580
Query: 313 --GKNQYGQLGLGTVEDQPFPLKV 334
G N YGQLG GT D+ P+ +
Sbjct: 581 ACGDNLYGQLGDGTTTDKSAPVPI 604
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + +A G H++ + + + +G N++G G + + +L G +
Sbjct: 46 TGVISVAAGYYHSLALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQ-----VLNLTG--V 98
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEG-----ERI 180
+ + L G V+S WG +G + LG+ + Q+ P V+ G +
Sbjct: 99 IAIAADYYQSFALKSDGTVWS--WGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDV 156
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V +++ LA+ G V+ WG + GQ+ + + V Q ++ V +++G +
Sbjct: 157 VAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAV--QAVNLTDAVAISAGAA 214
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L G V SWG YG LG G + S P G N ++SL AG
Sbjct: 215 HSLALRANGAVVSWGANTYGQLGNG-TTTTSASP-------VGVSGLN---NIKSLAAGG 263
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+ + G + WG N YGQ+G G + P+ V+
Sbjct: 264 NHSLALKSDGTVTAWGYNAYGQVGNGATANVLSPIAVST 302
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G HTL + + G V++ G+ G+ G G + +P V + G ++ +++ LA
Sbjct: 4 GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVS-NLTG--VISVAAGYYHSLA 60
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G V+ WG + YG + ++ T V Q ++ ++ +A+ L +G V+
Sbjct: 61 LKSDGTVWAWGLNTYGNLGDNTTTTRTKPV--QVLNLTGVIAIAADYYQSFALKSDGTVW 118
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWGY LG ++ + P + + G +P + V ++ AG A+ + G +
Sbjct: 119 SWGYNGNSALGNASPATQKL-PAQVQQSFGGI--LSPLTDVVAIAAGTHHTLALKSNGTV 175
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG N GQLG GT+ Q ++
Sbjct: 176 WSWGLNSSGQLGNGTLATQSAAVQA 200
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 107/271 (39%), Gaps = 34/271 (12%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G HT+ + + + G N G+ G G + + +++L G ++ G
Sbjct: 4 GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQ-----VSNLTG--VISVAAGYY 56
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H+L L G V++ G G G + P V + ++ +++ A+
Sbjct: 57 HSLALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQV---LNLTGVIAIAADYYQSFALKS 113
Query: 196 KGDVFGWG---NSEYGQISESEMQISTPRVLSQCKG-----VSRIVDVASGGSACTMLND 247
G V+ WG NS G S + ++ P + Q G ++ +V +A+G L
Sbjct: 114 DGTVWSWGYNGNSALGNASPATQKL--PAQVQQSFGGILSPLTDVVAIAAGTHHTLALKS 171
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G V+SWG G LG G ++S + T ++ AG A+
Sbjct: 172 NGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLT-----------DAVAISAGAAHSLALR 220
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G + WG N YGQLG GT P+ V+
Sbjct: 221 ANGAVVSWGANTYGQLGNGTTTTSASPVGVS 251
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 154/330 (46%), Gaps = 47/330 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG +TV+ T+ +++ CG N QLG+ RK+ + + +FV
Sbjct: 112 EIEQIACGENYTVLITRDG----QVYSCGNNDYGQLGHEKGRKRLQLIPGLDAFV----- 162
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG---RGIVQEEDYQGKWFC--H 117
K +A G HT+ + + F++G+N+ GQ G + +++ C H
Sbjct: 163 -------FKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIE---------CVPH 206
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIE 176
+ L ++ CG +H L LT +GK+YS G +DGQ GLG + N+ P L+ +
Sbjct: 207 MVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLI-SSLA 265
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDV 235
G I ++ +A+S G VFGWG + +GQ+ ++ + + PR L + +++
Sbjct: 266 GVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQN-AKVCYA 324
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A G L +G V++ G YG LG G S + P + L G S V
Sbjct: 325 ACGEEFSVFLTVDGGVFTCGAGMYGQLGHG-NTSNEILPRQV-MELMG-------STVTQ 375
Query: 293 LIAGP-CTFGAITNFGHLYMWGKNQYGQLG 321
+ G T G + + G +Y WG GQLG
Sbjct: 376 ISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 152/333 (45%), Gaps = 32/333 (9%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+AC V + DKN+ +G ++ + LG + P EL
Sbjct: 60 LACEPIIAVEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDF----------QK 109
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+T+I+ +A G +T++IT + ++ GNN +GQ G +G+ I L+
Sbjct: 110 ATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHE-------KGRKRLQLIPGLDAFV 162
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSS 185
CG HTL + E G+++S G A+GQ GL N E P +VR + +V+++
Sbjct: 163 FKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRA-LGTSVVVQVAC 221
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ VLA+++ G ++ WG++ GQ+ ++ + +I P+++S GV I + GG
Sbjct: 222 GINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIK-PKLISSLAGVP-IAFITCGGYHS 279
Query: 243 TMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
++ G V+ WG GQ G +R+ L Q Q +KV G
Sbjct: 280 MAISKSGAVFGWGKNTFGQLGLNDTRN-------RNLPRQLQTLQNAKVCYAACGEEFSV 332
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G ++ P +V
Sbjct: 333 FLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQV 365
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG + T N KL+ G NSD QLG K +L+ S +P
Sbjct: 216 VVQVACGINHVLALTN----NGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVP--- 268
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I + G H++ I+ + F +G N+FGQ G D + + + L+
Sbjct: 269 ------IAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLN-----DTRNRNLPRQLQTLQ 317
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
K+ A CG++ ++FLT G V++CG G GQ G G+ +N+ P V E+ G + ++
Sbjct: 318 NAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVM-ELMGSTVTQI 376
Query: 184 SSAVDCVLA-VSDKGDVFGWGNSEYGQISES-EMQISTPRVL 223
S L V +G V+ WG GQ+ + ++TP+V+
Sbjct: 377 SCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVV 418
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I I CG ++ +KS +FG G N+ QLG +D R + P +L
Sbjct: 267 VPIAFITCGGYHSMAISKSG----AVFGWGKNTFGQLGLNDTRNRNLPRQLQTL------ 316
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++ + A G ++ +T + G FT G +GQ G G E + +
Sbjct: 317 ----QNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNE-----ILPRQVME 367
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL L S G+VY+ G G GQ G + TP +V G
Sbjct: 368 LMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVHG 420
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +T ++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTHSDEVFVFGVNCSNCLGTG-----DNQSTIVPKKLELLSGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P + + +++ +++ +A+
Sbjct: 84 GPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+D G+V+ WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 ADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHSVC----VLQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGNKSNLLSPAQIMVEKER 285
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F G+N + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELL----------SG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTN----QGIAPIQICTNLMIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ + CG H++ L + G+VY+ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV D G+V+GWG + GQ + + Q++ RV S C ++ + G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC-----VLQIVCGYAH 244
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--G 296
L DEGL+Y+WG YG LG G K S + P I K +V + A
Sbjct: 245 TLALTDEGLLYAWGANTYGQLGTGNK-SNLLSPAQI---------MVEKERVVEIAACHS 294
Query: 297 PCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 295 AHTSAAKTQGGHVYMWGQ 312
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 60 PLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P P+K +IK +A G +H + +T + ++G N GQ G G ++ K
Sbjct: 100 PQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQK----- 154
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I +G + G +HT +TE G++Y GWG G GLG N++ P V +EG
Sbjct: 155 IQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS-TVEGV 213
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVAS 237
++VK++ ++VS G ++ +G S+YGQ+ + + TP L + ++ S
Sbjct: 214 KMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQ--ENLISEIS 271
Query: 238 GGSACTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
GG TM L +G +Y WG+ GQ G V P Q +F + KV +
Sbjct: 272 GGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDH-CSPV--------QVKFPHEQKVVHI 322
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G A+T +++ WG+ GQLG G D+ P + V
Sbjct: 323 SCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEV 365
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I IACG + T D ++ +G N + QLG P + + +F +
Sbjct: 109 LRIKQIACGDSHCLAVTM--DGEVQSWG--RNQNGQLGLGTTEDSLVP-QKIQAFQGV-- 161
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D + ++
Sbjct: 162 -------SVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG-----DRNDRLVPEKVST 209
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EG K++ CG HT+ ++ SG +Y+ GW GQ G G + TP + ++ I
Sbjct: 210 VEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLIS 268
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + V + ++V ++ G
Sbjct: 269 EISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRH 328
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI 274
+ + V+SWG G LG G + R++ P +I
Sbjct: 329 TLAVTERQNVFSWGRGTNGQLGHGESIDRNI-PKMI 363
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 43/282 (15%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + ++G GQ G G D + + ++ L
Sbjct: 11 VSAPVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHG-----DAEDRLSPTYLSAL 65
Query: 123 EGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +++ CG DHT +ES +VYS WG D TP ++ + G RI
Sbjct: 66 DGHEVVSVTCGADHTTAYSESFTQVYS--WGCD----------LFTPQPIKA-LHGLRIK 112
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ G+V WG ++ GQ+ + S P+ + +GVS + VA+G
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVS-VKMVAAGAE 171
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE--SLIA 295
+ ++G +Y WG YG LG G + R L+P + S VE ++
Sbjct: 172 HTAAVTEDGELYGWGWGRYGNLGLGDRNDR-----LVPEKV---------STVEGVKMVK 217
Query: 296 GPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C + ++++ G LY +G ++YGQLG G ED P K+
Sbjct: 218 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKL 259
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 26/215 (12%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G ++ +P + ++G +V ++
Sbjct: 16 RRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSA-LDGHEVVSVT 74
Query: 185 SAVDCVLAVSDK-GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
D A S+ V+ WG + TP+ + G+ RI +A G S C
Sbjct: 75 CGADHTTAYSESFTQVYSWG-----------CDLFTPQPIKALHGL-RIKQIACGDSHCL 122
Query: 244 MLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ +G V SWG G LG G + + +L+P + Q V+ + AG
Sbjct: 123 AVTMDGEVQSWGRNQNGQLGLG-----TTEDSLVPQKI----QAFQGVSVKMVAAGAEHT 173
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+T G LY WG +YG LGLG D+ P KV+
Sbjct: 174 AAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS 208
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 127/277 (45%), Gaps = 24/277 (8%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
LPV P T + LA G H++ + N +G+N++GQ G G + +
Sbjct: 387 LPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRT-----APVVV 441
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G ++ G DH+L L G V + G A GQ G G N + TP V G
Sbjct: 442 PALTG--VVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTN--- 496
Query: 180 IVKLSSA-VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+V LS + LA+ G V WG + GQ+ + S TP +S G++ +V +A+
Sbjct: 497 VVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVS---GLTNVVAIAA 553
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
GG L G V SWGYG+ G + + PT P + G + V ++ AG
Sbjct: 554 GGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPT--PKAVPG------VTNVVAIAAGA 605
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G +Y WG+N +GQLG GT + P++V
Sbjct: 606 NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQV 642
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 142/328 (43%), Gaps = 46/328 (14%)
Query: 18 TKSKDKNLKLFGCGL------NSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIK 71
T D +L L G N+ QLG ++G P+++ T +
Sbjct: 451 TAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQV------------SGLTNVV 498
Query: 72 HLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
L+ G+ H + + + +G N GQ G G +W ++ L ++
Sbjct: 499 ALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSN-----RWTPVAVSGLT--NVVAI 551
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G D++L L +G V S G+G G G + TP V G +V +++ + V
Sbjct: 552 AAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTN---VVAIAAGANHV 608
Query: 191 LAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LA+ G V+ WG +++GQ+ + + +Q +TP Q G++ +V +A+G L +G
Sbjct: 609 LALRADGTVYAWGRNDFGQLGDGTTVQRNTP---VQVPGLTNVVAIATGWDHSLALRADG 665
Query: 250 LVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
VY+WGY LG G + P +P + V ++ AG A+ +
Sbjct: 666 TVYAWGYNYARQLGDGSTANYRQTPAPVPG----------LTNVVAVTAGGNQSLALLSS 715
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N +G+LG G+ P P+ V
Sbjct: 716 GAVHAWGDNSHGELGNGSTLTPPAPVAV 743
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 133/321 (41%), Gaps = 64/321 (19%)
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE------------- 108
P++ S + LA+G+AH+++ T + +G+N+ GQ G G +
Sbjct: 39 PLRSGSPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGAV 98
Query: 109 --------------DYQGKWFCHNIADLEGE----------------KIMDAVCGQDHTL 138
D + + +N G+ ++ G +H L
Sbjct: 99 AVSAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLSGVVAIAAGNNHAL 158
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L G V + G+ A GQ G G + TP V G +V +++ + LAV G
Sbjct: 159 ALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG---VVAIAAGENHSLAVLADGT 215
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY- 256
V WGN+ YG++ + + Q ++P ++S GV+ I A+G + + +G V +WGY
Sbjct: 216 VRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAI---AAGANHSLAVLADGTVRAWGYN 272
Query: 257 --GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G R+ P +P + V + AG A+ G WG
Sbjct: 273 ASGRLGDGTTTQRA-TPVAVPG----------LTGVTEISAGGGHSLALLADGTARAWGS 321
Query: 315 NQYGQLGLGTVEDQPFPLKVA 335
N GQLG GTV ++ P+ V+
Sbjct: 322 NVSGQLGDGTVSNRTSPVLVS 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + +A G H++ + + +G N+ G+ G G + +A +
Sbjct: 245 TGVTAIAAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQR-------ATPVAVPGLTGV 297
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G H+L L G + G GQ G G ++N+ +P LV + G + LS+
Sbjct: 298 TEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVS-SLTG--VTALSAGG 354
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ LA+ G WG + GQ+ + + Q + P L GV+ + A+GG +
Sbjct: 355 NHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAAL---AAGGYHSLAVL 411
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V +WG YG LG G R+ P ++P+ + V SL AG A+
Sbjct: 412 ANGTVRAWGHNTYGQLGDGSTAQRT-APVVVPA----------LTGVVSLTAGYDHSLAL 460
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G + WG N GQLG GT + P++V+
Sbjct: 461 LSDGTVRAWGNNASGQLGDGTTNQRGTPVQVS 492
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 24/277 (8%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV P T + ++ G H++ + + A +G+N GQ G G V ++
Sbjct: 288 PVAVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVL-----VS 342
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G + A G +H+L L G + G GQ G G + P + G +
Sbjct: 343 SLTGVTALSA--GGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTG---V 397
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
L++ LAV G V WG++ YGQ+ + S Q + P V+ GV V + +G
Sbjct: 398 AALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGV---VSLTAGY 454
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L +G V +WG GQ + + + T + Q + + V +L G
Sbjct: 455 DHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPV--------QVSGLTNVVALSGGKLY 506
Query: 300 FG-AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ + G + WG N GQLG G+ ++ P+ V+
Sbjct: 507 HALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVS 543
>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
Length = 364
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 74/292 (25%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G NS+GQ G G +E+ K DL + I+ G HTL L ++G VY C
Sbjct: 4 YSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYCC 63
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
GW + GQ G + +T + + EI +G RIV++S D AVS+ G F WGN+ Y
Sbjct: 64 GWNSKGQLG----TSDDTLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYT 119
Query: 209 QIS----------ESEMQISTPRV------------------------------------ 222
Q+ S +Q+S
Sbjct: 120 QLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLG 179
Query: 223 ----------LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSM 269
+S+ + IV +ASG +L ++G VYSWG YG LG P +S S
Sbjct: 180 DNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISNSF 239
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
P I H N + S+ AG A++ G ++ WG+N YGQLG
Sbjct: 240 VPMEIL------HDAN----LGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG 281
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 139/332 (41%), Gaps = 30/332 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA G G T++ DKN ++ CG NS QLG D K +E++ F
Sbjct: 41 IVAIAGGAGHTLIL----DKNGFVYCCGWNSKGQLGTSDDTLKITQIEILKGF------- 89
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+I ++ G + +++ F +GNNS+ Q G + + G ++
Sbjct: 90 -----RIVQISCGWDFSAAVSECGKQFVWGNNSYTQLG--LSKSITCTGIPSRLQVSQKL 142
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
CG H+ L + G + G G+ GQ GLG + + + E IV +
Sbjct: 143 ATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDNFDDNNYLSISKVPDLEDIVSI 202
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+S + + + G V+ WG ++YGQ+ + IS V + + + V +G +
Sbjct: 203 ASGQHHTVVLKEDGTVYSWGENKYGQLG-IDPNISNSFVPMEILHDANLGSVYAGWTHTA 261
Query: 244 MLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L+ G V++WG GQ G + + KP IP V L G A
Sbjct: 262 ALSKSGEVFTWGRNSYGQLGAQREVTYKPEKIPGL----------KDVTQLSVGSEHNLA 311
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G L++WG N++G G G D P ++
Sbjct: 312 VTKDGKLFVWGWNEHGSCGTGDKTDVCKPTQI 343
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 28/278 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIP 60
+I I+CG+ F+ ++ K F G NS +QLG G P L +S
Sbjct: 89 FRIVQISCGWDFSAAVSECG----KQFVWGNNSYTQLGLSKSITCTGIPSRLQVS----- 139
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ +T K ++ G H+ ++ + G G S GQ G G D +
Sbjct: 140 ---QKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLG--DNFDDNNYLSISKVP 194
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGER 179
DLE I+ GQ HT+ L E G VYS G GQ G+ +++N P + +
Sbjct: 195 DLE--DIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISNSFVPMEI---LHDAN 249
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+ + + A+S G+VF WG + YGQ+ P + G+ + ++ G
Sbjct: 250 LGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQREVTYKPE---KIPGLKDVTQLSVGS 306
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLI 274
+ +G ++ WG+ G G G K + KPT I
Sbjct: 307 EHNLAVTKDGKLFVWGWNEHGSCGTGDK-TDVCKPTQI 343
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 148/338 (43%), Gaps = 37/338 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+IT + CG T T ++ +++ G +LG+ GN S V P P
Sbjct: 74 RITSVICGADHT---TAYSEEEQQVYSWGWGDFGRLGH------GNS-----SDVFTPQP 119
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V+ +IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 120 VRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQK-----IQA 174
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG + G +HT +TE G +Y GWG G GLG N++ P V +EGE++V
Sbjct: 175 FEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVS-LVEGEKMV 233
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGS 240
++ + VS G ++ +G S+YGQ+ + + P + K S SGG
Sbjct: 234 LIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSS--TSQISGGW 291
Query: 241 ACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
TM L +G +Y WG +G +G G V P Q F + KV + G
Sbjct: 292 RHTMALTSDGKLYGWGWNKFGQVGAGDSVDHC-SPV--------QVMFPAEQKVAQVACG 342
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A T +++ WG+ GQLG G + D+ PL +
Sbjct: 343 WRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMI 380
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 21/267 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G +H++ + + ++G GQ G G D + + I+ + +I +C
Sbjct: 26 VSAGASHSVALLEGNVLCSWGRGEDGQLGHG-----DAEDRLVPTVISGFDAPRITSVIC 80
Query: 133 GQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G DH T + E +VYS GWG G+ G G+ ++ TP VR ++G +I +++ L
Sbjct: 81 GADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRA-LQGIKIKQMACGDSHCL 139
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV+ G+V WG ++ GQ+ + S P+ + +G+ + +A+G + ++G
Sbjct: 140 AVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGIC-VKMIAAGAEHTAAVTEDGD 198
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y WG YG LG G + R +P + K+ + G +++ G
Sbjct: 199 LYGWGWGRYGNLGLGDRNDR-----FVPEKV----SLVEGEKMVLIACGWRHTITVSSSG 249
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
LY +G ++YGQLG G ED FP KV
Sbjct: 250 ILYTYGWSKYGQLGHGDFEDHLFPHKV 276
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 31/313 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L G D QLG+ D + P V+S P +I + G HT ++
Sbjct: 42 LCSWGRGEDGQLGHGDAEDRLVPT--VISGFDAP--------RITSVICGADHTTAYSEE 91
Query: 87 EG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
E +++G FG+ G G + + + L+G KI CG H L +T G+
Sbjct: 92 EQQVYSWGWGDFGRLGHG-----NSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGE 146
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V S G +GQ GLG + P ++ EG + +++ + AV++ GD++GWG
Sbjct: 147 VQSWGRNQNGQLGLGTTEDSLLPQKIQA-FEGICVKMIAAGAEHTAAVTEDGDLYGWGWG 205
Query: 206 EYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
YG + + P +S +G ++V +A G ++ G++Y++G YG LG
Sbjct: 206 RYGNLGLGDRNDRFVPEKVSLVEG-EKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGH 264
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + L P + + S + G A+T+ G LY WG N++GQ+G
Sbjct: 265 G-----DFEDHLFPHKV----EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 315
Query: 322 LGTVEDQPFPLKV 334
G D P++V
Sbjct: 316 AGDSVDHCSPVQV 328
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG + T + + G N + QLG P + + +F I
Sbjct: 126 IKIKQMACGDSHCLAVTMGGE----VQSWGRNQNGQLGLGTTEDSLLP-QKIQAFEGIC- 179
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D ++ ++
Sbjct: 180 --------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRNDRFVPEKVSL 226
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EGEK++ CG HT+ ++ SG +Y+ GW GQ G G + P V ++
Sbjct: 227 VEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTS 285
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G ++GWG +++GQ+ + V ++ VA G
Sbjct: 286 QISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRH 345
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
++ V++WG G LG G V R+ KP +I + + K+ES A P
Sbjct: 346 TLAYTEKKNVFAWGRGTSGQLGHGEIVDRN-KPLMIDAI---SPDGSGSKKLESSTAVPF 401
Query: 299 T 299
T
Sbjct: 402 T 402
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H++ L E + S G G DGQ G G ++ P ++ G + RI + D
Sbjct: 28 AGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISG-FDAPRITSVICGADHTT 86
Query: 192 AVSDK-GDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A S++ V+ WG ++G++ + + TP+ + +G+ +I +A G S C + G
Sbjct: 87 AYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGI-KIKQMACGDSHCLAVTMGG 145
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V SWG G LG G + + +L+P + Q V+ + AG A+T
Sbjct: 146 EVQSWGRNQNGQLGLG-----TTEDSLLPQKI----QAFEGICVKMIAAGAEHTAAVTED 196
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G LY WG +YG LGLG D+ P KV++
Sbjct: 197 GDLYGWGWGRYGNLGLGDRNDRFVPEKVSL 226
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG 238
+V +S+ +A+ + + WG E GQ+ + + P V+S RI V G
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFD-APRITSVICG 81
Query: 239 GSACTMLNDE-GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T ++E VYSWG+G G+ + S T P K++ + G
Sbjct: 82 ADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRAL------QGIKIKQMACGD 135
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G + WG+NQ GQLGLGT ED P K+
Sbjct: 136 SHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKI 172
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ P LI S L + AG +T G ++ WG+N++GQLGL
Sbjct: 173 IDCQKQTSPQLIKSLL--------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 323 GTVEDQPFP 331
D+ P
Sbjct: 225 NDENDRYVP 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIK-SLSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSLR--------SQKIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIK-SLLG 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 126/274 (45%), Gaps = 28/274 (10%)
Query: 69 QIKHLATGRA-------HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
Q+ LA GRA HT+++ N + +G+N+ GQ G G Q +
Sbjct: 393 QVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLP------VN 446
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G I G HT L G V+S G GQ G G ++ TP V G + G +
Sbjct: 447 LTG--ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPG-LTG--VT 501
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ LA+ G V+GWG + YGQ+ + T V Q G++ IV +A+GG
Sbjct: 502 SIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV--QVSGLTNIVSIAAGGGH 559
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V+++GY GQ +R+ T++P G V SL AG
Sbjct: 560 SLALRSDGTVWAFGYNFDGQLGNGTRTW--TILPVQAVG------LGNVVSLAAGKMYSL 611
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ G ++ WG N GQLG+GT + PL+V+
Sbjct: 612 ALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVS 645
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
R+P PV+ LA G+ H++ + F +G N GQ G G Q++
Sbjct: 48 ARLP-PVR--------LAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDK-------- 90
Query: 117 HNIADLEGEKIMDAV---CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
A ++ + AV G ++L L E+G V++ G A GQ G G L + P V G
Sbjct: 91 --AAPVQVAGVASAVSVAAGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSG 148
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
+G V L+S +A+ G V+ WG++ Q+ + + S V G+S IV
Sbjct: 149 LTQG---VSLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSP--VPIPVPGLSDIV 203
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
V +GGS+ L +G V++WG YG LG G V R+ P + + V
Sbjct: 204 AVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRA-APVRVANL----------DAV 252
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ AG A+ G + WG N +GQLG GT + P+ + +
Sbjct: 253 THISAGAYHALALRADGTAWAWGYNAFGQLGDGTTVQRTLPVLIGL 298
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 122/277 (44%), Gaps = 27/277 (9%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P T + +ATG H++ + N + +G N +GQ G G + + ++
Sbjct: 491 PVQVPGLTGVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQ-----VS 545
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L I+ G H+L L G V++ G+ DGQ G G P G +
Sbjct: 546 GLT--NIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGL---GNV 600
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V L++ LA+ G V+ WG + GQ+ Q S V Q G+S I + +G
Sbjct: 601 VSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSA--VPLQVSGLSAITSITAGTY 658
Query: 241 ACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V++WG+ G LG G +R + P L+ S S ++ AG
Sbjct: 659 HSLALRSDGWVWAWGFNFEGQLGNGTSDNR-LTPGLVVS----------MSNATAIFAGD 707
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G L+ WG N +GQLG G + FP++V
Sbjct: 708 LHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQV 744
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 100 CGRGIVQEEDYQGKWFCHNIADLEGEKI--MDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
CG VQE D + G ++ + GQ H+L + G V++ G+ GQ
Sbjct: 27 CGVDAVQERDSA----TETVRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQL 82
Query: 158 GLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
G G ++ P V G V +++ LA+ + GDV+ WG++ GQ+ + +
Sbjct: 83 GDGTTQDKAAPVQVAGVAS---AVSVAAGDQYSLALDENGDVWAWGDNASGQLGDGTL-- 137
Query: 218 STPRVL-SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPS 276
TPR + G+++ V +ASG + L +G V++WG Q + + P IP
Sbjct: 138 -TPRAQPRRVSGLTQGVSLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIP- 195
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
S + +++AG + A+ G ++ WG N+YGQLG GT + P++VA
Sbjct: 196 -------VPGLSDIVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVRVA 247
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 57 VRIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
VR PV+ + + H++ G H + + + A+ +G N+FGQ G G +
Sbjct: 238 VRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQLGDGTTVQR------- 290
Query: 116 CHNIADLEG-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+ L G + V G H+L + G V++ G Q G G+L + P L G
Sbjct: 291 --TLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVP-LHAGM 347
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSR-I 232
G V L + +A+ G + WG++ +GQ+ ++ Q PR+ Q G++
Sbjct: 348 TGG---VTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQ---PRMAPVQVTGLALGR 401
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
D SG ML G +++WG G LG G + + S+ +P L G
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLP---LPVNLTG--------- 449
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ S+ +G A+ G ++ WG NQYGQLG GT D+ P++V
Sbjct: 450 ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQV 494
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 26/287 (9%)
Query: 55 SFVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+ R P+P+ P + I + G + ++ + + + +G+N +GQ G G +
Sbjct: 186 TLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVR 245
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+A+L+ + A G H L L G ++ G+ A GQ G G + P L+ G
Sbjct: 246 -----VANLDAVTHISA--GAYHALALRADGTAWAWGYNAFGQLGDGTTVQRTLPVLI-G 297
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
E +V + LAV G V+ WG++ Y Q+ + T + G++ V
Sbjct: 298 LTETRTVVAGNY---HSLAVRTDGAVWAWGDNRYRQLGTGNL---TSSAVPLHAGMTGGV 351
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+ +G L +G +SWG + GQ M P + G+ ++
Sbjct: 352 TLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALGRADAT-SGQLH 410
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+++ G G L+ WG N GQLG GT ++ PL V + G
Sbjct: 411 TVMLGAN--------GRLWAWGDNNQGQLGNGTQQNSSLPLPVNLTG 449
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 36/308 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLA--TGRAHTIV 82
KL+ CG ++ +LG D GN E P P+ S IK +A +G H +
Sbjct: 2962 KLYACGEGTNGRLGLGD---DGNACE--------PKPIPFLSQYVIKKVAVHSGGKHALA 3010
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G G D I L+ ++I D CG H+ +T
Sbjct: 3011 LTQDGRVFSWGEGEDGKLGHGNCSSLDKP-----RLIESLKSKRIRDVACGSGHSAAITS 3065
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVF 200
SG++Y+ G G G+ G G N Q P LV+ + G+R+++++ S +A++ G V+
Sbjct: 3066 SGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLV-GQRVIQVACGSRDAQTMALTADGSVY 3124
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
WG+ ++G++ TP ++ + G+ +V + G L G V++WG Y
Sbjct: 3125 SWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQIECGAQFSLALTKYGEVWTWGKGDY 3183
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G KPTL+ L G+ KV + G A+T+ G +Y WG N
Sbjct: 3184 FRLGHGND-HHVRKPTLVEG-LRGK-------KVIHVAVGALHCLAVTDTGQVYAWGDND 3234
Query: 317 YGQLGLGT 324
+GQ G G+
Sbjct: 3235 HGQQGNGS 3242
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + +T++ +++GN G+ G G Y+ ++ D + I CG ++
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHG--DRTWYEEPKLIESLVD---KNITFIACGSTYSA 571
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDK 196
L+ +G++Y+ G G G+ G G+ ++ P LV + G IV ++ S L V+
Sbjct: 572 ALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSA-LNGHMIVYVACGSGDSQTLCVTAS 630
Query: 197 GDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G VF WG+ +YG++ S TP+++ + ++ + V GG L G VY+WG
Sbjct: 631 GIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDIN-VAKVYCGGQFSAALTAYGEVYTWG 689
Query: 256 YG---LLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G LG G PK ++K KV+ L G A+T
Sbjct: 690 KGEAYRLGHGNEEHVRYPKAIEALK----------------TKKVKELCVGSLHVLALTE 733
Query: 306 FGHLYMWGKNQYGQL--GLGTVEDQP 329
+Y WG+N YGQ+ LGT+ +P
Sbjct: 734 DQLVYGWGRNDYGQIDPALGTIVSEP 759
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D+ACG G + T S + L+ GL +LG+ D + P +LV S V
Sbjct: 3049 RIRDVACGSGHSAAITSSGE----LYTWGLGEYGRLGHGDTNTQLKP-KLVQSLV----- 3098
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
++ +A G A T+ +T + +++G+ FG+ GRG G C+
Sbjct: 3099 ----GQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG--------GSDGCYTPL 3146
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
+ L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3147 LVDRLNGLGVVQIECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-L 3203
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3204 RGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3237
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLA 192
+D TL SG +Y GWG + + LG L + V E + R V+L+ + A
Sbjct: 3886 EDWTLSWDGSGAIY--GWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFA 3943
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLND 247
V+ G V+ G G++ ++S M P +L + V + V V SGG C L+
Sbjct: 3944 VTADGKVYATGYGAVGRLGIGGTDSVMM---PTLLESIQHVFVKKVAVNSGGKHCLALSS 4000
Query: 248 EGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
EG VYSWG G LG G ++S +P LI L +++ + G AIT
Sbjct: 4001 EGHVYSWGEGDDGKLGHGNRLSYD-RPKLIEELL--------GTEIVDVACGGHHSAAIT 4051
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G LY WGK +YG+LG G EDQ P
Sbjct: 4052 SAGWLYTWGKGRYGRLGHGDSEDQLTP 4078
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 22/268 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I +L
Sbjct: 3978 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKL-----IEEL 4032
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G +Q TP LV ++ +++
Sbjct: 4033 LGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA-LQDYKVID 4091
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ ++ V G
Sbjct: 4092 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VIKVECGS 4150
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G +Y+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4151 QFSVALTRSGSIYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4201
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGT 324
A ++ G ++ WG N GQLG GT
Sbjct: 4202 SLHCVACSDKGEVFTWGDNDEGQLGDGT 4229
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG N + P L + I+ V + S
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKK---VAVHS 3003
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + PR++ K RI DVA G
Sbjct: 3004 GGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKS-KRIRDVACGSGHSAA 3062
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G + +KP L+ S L GQ +V + G
Sbjct: 3063 ITSSGELYTWGLGEYGRLGHG-DTNTQLKPKLVQS-LVGQ-------RVIQVACGSRDAQ 3113
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG +G+LG G
Sbjct: 3114 TMALTADGSVYSWGDGDFGKLGRG 3137
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G VYS G G DG+ G G+ + + P L+ E+ G IV ++ A
Sbjct: 3991 GGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIE-ELLGTEIVDVACGGHHSAA 4049
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
++ G ++ WG YG++ +SE Q+ TP+++ + +++DVA G G A T+ + D+
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVEALQDY-KVIDVACGSGDAQTLCVTDD 4107
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4108 DNVWSWGDGDYGKLGRGG--SDGCKVPMKIESLAGLGVI----KVE---CGSQFSVALTR 4158
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G +Y WGK Y +LG GT + P KVA
Sbjct: 4159 SGSIYTWGKGDYHRLGHGTDDHVRRPRKVA 4188
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LTE VYS G G G+ G G E P L+ ++ + I ++ A+S
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVD-KNITFIACGSTYSAALSS 575
Query: 196 KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + + P ++S G IV VA SG S + G+V+
Sbjct: 576 NGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNG-HMIVYVACGSGDSQTLCVTASGIVF 634
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G + S P ++ L V + G A+T +G +
Sbjct: 635 SWGDGDYGKLGRG-GCNGSKTPKIVDKLL--------DINVAKVYCGGQFSAALTAYGEV 685
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
Y WGK + +LG G E +P
Sbjct: 686 YTWGKGEAYRLGHGNEEHVRYP 707
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 26/236 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G ++ ++ N +T+G ++G+ G G +D ++ L G I+
Sbjct: 560 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHG--NSDDVMVPTL---VSALNGHMIVY 614
Query: 130 AVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG TL +T SG V+S G G G+ G G N +TP +V ++ + K+
Sbjct: 615 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIV-DKLLDINVAKVYCGG 673
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A++ G+V+ WG E ++ +E + P+ + K ++ ++ G L
Sbjct: 674 QFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALK-TKKVKELCVGSLHVLALT 732
Query: 247 DEGLVYSWGYGLLGQ-----GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
++ LVY WG GQ G VS +PTL P TL G++ V L+ GP
Sbjct: 733 EDQLVYGWGRNDYGQIDPALGTIVS---EPTLCP-TLSGKN-------VIGLVCGP 777
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 20/199 (10%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + V E + + V ++ + VS +G ++ G G+
Sbjct: 2914 WGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGR 2973
Query: 210 ISE-SEMQISTPR---VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQG 262
+ + P+ LSQ V + V V SGG L +G V+SWG G LG G
Sbjct: 2974 LGLGDDGNACEPKPIPFLSQY--VIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHG 3031
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
S KP LI S ++ + G AIT+ G LY WG +YG+LG
Sbjct: 3032 -NCSSLDKPRLIESL--------KSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGH 3082
Query: 323 GTVEDQPFP-LKVAVGGQK 340
G Q P L ++ GQ+
Sbjct: 3083 GDTNTQLKPKLVQSLVGQR 3101
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 245 LNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L ++ VYSWG G LG G + +P LI S + F + G
Sbjct: 521 LTEDSSVYSWGNGDGGRLGHGDRTWYE-EPKLIESLVDKNITF--------IACGSTYSA 571
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+++ G LY WG+ YG+LG G +D P V+
Sbjct: 572 ALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVS 605
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D ++P+
Sbjct: 4088 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKVPMK 4134
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4135 IESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4189
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + ++ G+V++ G +GQ G G + P LV ++G++I
Sbjct: 4190 LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHA-LQGKKIT 4248
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4249 RVACGSAHTLAWS 4261
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TD++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDDDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLNPAHIMVEKER 285
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 26/255 (10%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G QG +L +K+
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGVAPIQVCTNLLIKKV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K + + P H K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-NNLLNPA---------HIMVEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 20/260 (7%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
I T +E ++ G N+ G G G D + G+KI+ G H L
Sbjct: 59 IFTTLDEKVYSLGTNTSGCLGVG-----DNSSSLEPRLLESFSGQKIISLSAGSGPHVLV 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT+ G VYS G + Q G G + +P L+ I ++V+++ +A++ +G+V
Sbjct: 114 LTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNIS-NKVVQIACGSHHSMALTTEGEV 172
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
+ WG + GQI S S +PR ++ C G RI+D+ G + + D G VYSWGY
Sbjct: 173 YTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNG 232
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G V+++ P + + L G + ++ G A+T+ G ++ WG N
Sbjct: 233 NGQLGVGNNVNQT-NPCRV-AALQG-------VVIAQVVCGYAHALALTDNGVVFGWGAN 283
Query: 316 QYGQLGLGTVEDQPFPLKVA 335
YGQLG G + PL+VA
Sbjct: 284 SYGQLGSGNKANTCTPLQVA 303
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA-HTIVIT 84
K++ G N+ LG D P L+ SF +I L+ G H +V+T
Sbjct: 66 KVYSLGTNTSGCLGVGDNSSSLEP-RLLESF---------SGQKIISLSAGSGPHVLVLT 115
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ G +++G+NS+ Q G G NI++ K++ CG H++ LT G
Sbjct: 116 QDGGVYSWGHNSYMQLGNGGT-SPGTSPSLLSRNISN----KVVQIACGSHHSMALTTEG 170
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+VY+ G+ GQ G G NQ +P V I +RI+ ++ L V+D G+V+ WG
Sbjct: 171 EVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGY 230
Query: 205 SEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ GQ+ + + + P ++ +GV I V G + L D G+V+ WG YG LG
Sbjct: 231 NGNGQLGVGNNVNQTNPCRVAALQGVV-IAQVVCGYAHALALTDNGVVFGWGANSYGQLG 289
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--GAITNFGHLYMWGK 314
G K + + P + + + +V L A + A GH+YMWG+
Sbjct: 290 SGNK-ANTCTPLQVATRI---------GRVVCLAATHYSHSSAARNQSGHIYMWGQ 335
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 133 GQDHT--LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DC 189
GQ T +F T KVYS G G G+G ++ P L+ G++I+ LS+
Sbjct: 52 GQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLE-SFSGQKIISLSAGSGPH 110
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
VL ++ G V+ WG++ Y Q+ T L +++V +A G L EG
Sbjct: 111 VLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEG 170
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
VY+WGY G +G G ++ P + + + + ++ + G T +T+
Sbjct: 171 EVYTWGYNNCGQIGSGSTANQG-SPRKVTACIGNK-------RIIDITCGQTTSLCVTDS 222
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G +Y WG N GQLG+G +Q P +VA
Sbjct: 223 GEVYSWGYNGNGQLGVGNNVNQTNPCRVA 251
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 118/269 (43%), Gaps = 19/269 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
T + + +TDN+ F FG N G G D Q + L G+KI
Sbjct: 27 FGTSASEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSY 81
Query: 133 GQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H L TE G VY+ G Q G G N V + +++V+++ +
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSHHSM 141
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY WGY G LG G ++ L P + H V ++ G A+T+ G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSV----CVNQIVCGYAHTLALTDEG 252
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
LY WG N YGQLG G + P + V
Sbjct: 253 LLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 36/315 (11%)
Query: 9 CGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST 68
C +G + N ++F GLN + LG D + P +L +
Sbjct: 25 CVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGK---------- 74
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G QG +L +++
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIATVQVCTNLLIKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K + + P H K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I + CG T++ K KLF GLN QLG+ R + P++ + +
Sbjct: 36 IVQVGCGENHTILVMKDG----KLFSFGLNDYGQLGHCRSRTRAEPVDGLEA-------- 83
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
H TQ+ A G HT+ + F +G+NS GQ G + + K + L
Sbjct: 84 -HNITQV---ACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKM----VKSLA 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVK 182
++++ CG+ H++ LT G++Y G + GQ GLG ET PCLV+ ++G I
Sbjct: 136 TKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVK-LLQGIPISH 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+S D AV+ G V+GWG + +GQ+ + + R+ + G
Sbjct: 195 ISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPC-T 299
L +G V+++G G+ GQ + + M P + + + V + G C T
Sbjct: 255 AALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELM--------GTTVTQICCGRCHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLG 321
+ + G +Y +G GQLG
Sbjct: 307 LAFVPSKGRIYAFGLGGSGQLG 328
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+ I+ CG++HT+ + + GK++S G GQ LGH ++ V G +E I +++
Sbjct: 34 DDIVQVGCGENHTILVMKDGKLFSFGLNDYGQ--LGHCRSRTRAEPVDG-LEAHNITQVA 90
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA ++ G+VF WG++ GQ+ + E + TP+++ ++V +A G S
Sbjct: 91 CGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL-ATKQVVQIACGRSHS 149
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L + G +Y WG +G LG G + KP L+ Q P S + G
Sbjct: 150 MALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL-----QGIPISHIS---CGADF 201
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G +Y WGKN +GQLGLG D+P P ++
Sbjct: 202 SFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQL 236
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 28/273 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQEEDYQGKWFCHNIADLEGEKI 127
I + G HTI++ + F+FG N +GQ G R + E G LE I
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDG---------LEAHNI 86
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSA 186
CG HTL E G+V++ G ++GQ GL + TP +V+ + +++V+++
Sbjct: 87 TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKS-LATKQVVQIACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A+++ G+++ WG++ +GQ+ S + P ++ +G+ I ++ G
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIP-ISHISCGADFSFA 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ G VY WG +G LG G R +PT + S F +V + G
Sbjct: 205 VTPSGAVYGWGKNSFGQLGLGDTTDRP-QPTQLKSLRF--------QRVTYIRCGMDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG T ++ P KV
Sbjct: 256 ALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKV 288
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLEL-VMSFVRIP 60
I I+ I+CG F+ T S ++G G NS QLG D + P +L + F R+
Sbjct: 190 IPISHISCGADFSFAVTPSG----AVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRV- 244
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ G HT +T + G FTFG +GQ G E K +
Sbjct: 245 ----------TYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRK-----VL 289
Query: 121 DLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+L G + CG+ HTL F+ G++Y+ G G GQ G N +P LV G E
Sbjct: 290 ELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGPWE 346
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 29/301 (9%)
Query: 26 KLFGCGLNSDSQLG---YHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+F CG S +LG + + R L M VR ++ GR H +
Sbjct: 2978 KVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVR----------KVAVSCAGR-HVLA 3026
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G+ +GQ G G +Q D I + + I + CG H+ ++
Sbjct: 3027 VTADGKVFSWGDGQYGQLGHGSLQSYDRPKM-----IEIFQAKHIREVSCGTGHSAAVSV 3081
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI--VKLSSAVDCVLAVSDKGDVF 200
+G++++ G GADG+ G G NNQ P LVR +E RI V S LA D ++
Sbjct: 3082 NGELFTWGQGADGRLGHGDSNNQTKPKLVRA-LEKVRISCVACGSRNAHTLAAGDNS-LW 3139
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WG+ +G++ + ST + S I+ + G +L EG VY+WG G
Sbjct: 3140 AWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYY 3199
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+ S S++P IP+ + G + + G A+T+ G +Y WG N++GQ
Sbjct: 3200 RLGNDSTSVQP--IPTLVDGL----ASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQ 3253
Query: 321 G 321
G
Sbjct: 3254 G 3254
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 45/287 (15%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
QI H +G H + +T + +++G S G G G + + +A L G++I+
Sbjct: 510 QIDHNPSGN-HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTA-----VAALSGDRIV 563
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G H+ +TE G +Y+ G G+ G+ G G+ ++ P +V G + G +IV+ VD
Sbjct: 564 HISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEG-LNGVKIVQ----VD 618
Query: 189 C------VLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSA 241
C LA+ D G V+ WG+ +YG++ Q P+ +S S +V + G
Sbjct: 619 CGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQI 678
Query: 242 CTMLNDEGLVYSWGYG---LLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
L +G +YSWG G LG G PK+ + T++ G
Sbjct: 679 SMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVG----------- 727
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLG-LGTVEDQPFPLKVAVG 337
A C A+T +Y WGKN ++ G + P ++ A G
Sbjct: 728 ---AQHCV--ALTTDSDVYAWGKNSSFEVNESGDIISSPLMIEAASG 769
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 24/254 (9%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
F +G+N GQ G ++ + C ++++L I G + TLF +T+ GKVY+
Sbjct: 3837 FGWGHNHRGQLGG--IEGNKVKSPRLCESLSELNPAMI----TGGEQTLFAVTDDGKVYA 3890
Query: 149 CGWGADGQTGLGHLNNQETPC----LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
G+ A G+ G+G +N TP L I ++I S C LAV+ +G+++ WG
Sbjct: 3891 SGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHC-LAVTTQGELYAWGE 3949
Query: 205 SEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
E G++ + + ++ P ++ K ++D G S + D+G +Y+WG YG LG
Sbjct: 3950 GEDGKLGLGTTVNMNVPHLIESLKS-KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLG 4008
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
++ KP L+ S L G+ + + +G T G ++ WG YG+L
Sbjct: 4009 HNDHETQH-KPKLV-SALKGE-----QVTCVACGSGDAQTLCATASGCVFSWGDGDYGKL 4061
Query: 321 GLGTVEDQPFPLKV 334
G G E P K+
Sbjct: 4062 GRGGNEGSKVPKKI 4075
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 123/300 (41%), Gaps = 44/300 (14%)
Query: 57 VRIPLPVKHPSTQ---IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ 111
V P P+ +T+ +K +A +G H + +T + +G G+ G G +
Sbjct: 3907 VATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVP 3966
Query: 112 GKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
H I L+ + ++DA CG H+ +T+ G +Y+ G G G+ G Q P LV
Sbjct: 3967 -----HLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLV 4021
Query: 172 RGEIEGERI--VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKG 228
++GE++ V S L + G VF WG+ +YG++ + S P+ + G
Sbjct: 4022 SA-LKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTG 4080
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
++ + G L G VY+WG Y LG G HQ
Sbjct: 4081 -KHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD----------------SHQRT 4123
Query: 286 PKSKVESLIA---------GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
P+ +V L+A G T G ++ WG N GQ+G T + P ++ +
Sbjct: 4124 PR-RVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINI 4182
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 129/314 (41%), Gaps = 28/314 (8%)
Query: 26 KLFGCGLNSDSQLGYH-DPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
K+F GLN QLG K +P+E + R+ HP A G + V++
Sbjct: 2925 KVFVWGLNDMRQLGTDLSEAKVKSPIE-SRTLARL-----HPI----QFAGGSKCSFVVS 2974
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV--CGQDHTLFLTE 142
D+ F G S G+ G G + H I+ L + C H L +T
Sbjct: 2975 DDGKVFACGEGSSGRLGIG-----GFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTA 3029
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
GKV+S G G GQ G G L + + P ++ + + I ++S AVS G++F W
Sbjct: 3030 DGKVFSWGDGQYGQLGHGSLQSYDRPKMIEI-FQAKHIREVSCGTGHSAAVSVNGELFTW 3088
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG-SACTMLNDEGLVYSWGYGLLGQ 261
G G++ + T L + RI VA G +A T+ + +++WG G G+
Sbjct: 3089 GQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGK 3148
Query: 262 -GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G K S + F S + + G +T G +Y WGK +Y +L
Sbjct: 3149 LGLKDGSSSTDVPVQVITF-------PSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRL 3201
Query: 321 GLGTVEDQPFPLKV 334
G + QP P V
Sbjct: 3202 GNDSTSVQPIPTLV 3215
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 38/267 (14%)
Query: 72 HLATGRAHTIVITDNEG--AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + R ++ TD G F +G N Q G + E + +A L +
Sbjct: 2907 NMYSRRRLDLLSTDTHGNKVFVWGLNDMRQLGTDL-SEAKVKSPIESRTLARLHP---IQ 2962
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD 188
G + +++ GKV++CG G+ G+ G+G N P + + R V +S A
Sbjct: 2963 FAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGR 3022
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLS--QCKGVSRIVDVASGGSACTML 245
VLAV+ G VF WG+ +YGQ+ +Q P+++ Q K + R V +G SA +
Sbjct: 3023 HVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHI-REVSCGTGHSAAVSV 3081
Query: 246 NDEGLVYSWGYGL---LGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
N E +++WG G LG G PK+ R+++ I G +L A
Sbjct: 3082 NGE--LFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSR------NAHTLAA 3133
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGL 322
G + L+ WG +G+LGL
Sbjct: 3134 GDNS---------LWAWGDGSFGKLGL 3151
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +++CG G + + N +LF G +D +LG+ D + P +LV + ++
Sbjct: 3066 IREVSCGTGHSAAVSV----NGELFTWGQGADGRLGHGDSNNQTKP-KLVRALEKV---- 3116
Query: 64 KHPSTQIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHN 118
+I +A G AHT+ DN + +G+ SFG+ G + Q F N
Sbjct: 3117 -----RISCVACGSRNAHTLAAGDN-SLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSN 3170
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I +E CG ++ LT+ GKVY+ G G + G + Q P LV G + +
Sbjct: 3171 IIQIE--------CGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDG-LASK 3221
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVAS 237
I +++ LA++ G+V+ WG++E+GQ + S + P++++ KG RI +A
Sbjct: 3222 TITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKG-HRICKIAC 3280
Query: 238 GGS 240
G S
Sbjct: 3281 GSS 3283
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ T + F++G+ +G+ GRG +G I L G+ ++ +CG
Sbjct: 4036 SGDAQTLCATASGCVFSWGDGDYGKLGRG-----GNEGSKVPKKIDSLTGKHVIKLLCGS 4090
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
++ LT +G VY+ G G + G G ++Q TP V G + E ++ + + +
Sbjct: 4091 QFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCT 4150
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ G VF WG+++ GQI Q +S P+ ++ + +D + GSA ++
Sbjct: 4151 ESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNI--CIDHVACGSAHSI 4199
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL-EGEKIMDAVCG 133
+G AHT+ + D +++G+ +G+ GR + I+ + ++ +CG
Sbjct: 621 SGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKP-----ISGIGSTSPVVKIICG 675
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
++ LT+ GK+YS G G Q G G+ + P L+ G + + +S +A+
Sbjct: 676 NQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEG-LSETVVSDVSVGAQHCVAL 734
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ DV+ WG + +++ES IS+P ++ G ++ +A G S
Sbjct: 735 TTDSDVYAWGKNSSFEVNESGDIISSPLMIEAASGKGALL-IACGAS 780
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM-- 244
D L VFGWG++ GQ+ E ++ +PR+ C+ +S + G T+
Sbjct: 3825 DWTLPTGSTFSVFGWGHNHRGQLGGIEGNKVKSPRL---CESLSELNPAMITGGEQTLFA 3881
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ D+G VY+ GY G LG G S P+ L K ++ +G
Sbjct: 3882 VTDDGKVYASGYAAHGRLGIG-----SSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCL 3936
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G LY WG+ + G+LGLGT + P
Sbjct: 3937 AVTTQGELYAWGEGEDGKLGLGTTVNMNVP 3966
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 199 VFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVA-SGGSACT-MLNDEGLVYSW 254
VF WG ++ Q+ SE ++ +P + + ++R+ + +GGS C+ +++D+G V++
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSP---IESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G + M + +++ KV AG A+T G ++
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVR------KVAVSCAGRHVL-AVTADGKVFS 3035
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVAV 336
WG QYGQLG G+++ P + +
Sbjct: 3036 WGDGQYGQLGHGSLQSYDRPKMIEI 3060
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 156/344 (45%), Gaps = 25/344 (7%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+KI IACG +V+ +F CG N QLG+ ++K N E + ++ +
Sbjct: 51 FLKIRQIACGRHHSVMLLDDGS----VFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVK 106
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ +A G AH + +T++ F++G+N +GQ G V+ + K I
Sbjct: 107 QSF--VGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLG---VERMNVVAKARYPRIQ 161
Query: 121 DLEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
++ I+ CG +H+L L + G +++ G GQ G+G + P V ++ G
Sbjct: 162 EINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTV-NKLMGIP 220
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
I +L++ L ++ G VFGWG + +GQI ++E + L + +++ +A G
Sbjct: 221 ICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGE 280
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G ++++G YG LG G + S ++ L G S V + G
Sbjct: 281 DFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVM--ELMG-------SVVLDVACG 331
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVED-QPFPLKVAVGGQ 339
C AIT LY +G N GQLGL V+ PL + + Q
Sbjct: 332 RCHTLAITE-NKLYAFGLNTSGQLGLLNVKHTTSIPLPIPIEKQ 374
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 146/323 (45%), Gaps = 30/323 (9%)
Query: 23 KNLKLFGCGLNSDSQLGY----HDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA 78
K++ L CG SD QLG + + +E +F++ I+ +A GR
Sbjct: 14 KSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLK-----------IRQIACGRH 62
Query: 79 HTIVITDNEGAFTFGNNSFGQCGR-GIVQEED-YQG-KWFCHNIADLEGEKIMDAVCGQD 135
H++++ D+ F+ GNN F Q G GI ++ + Y+ W+ G ++ CG
Sbjct: 63 HSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDA 122
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAV- 193
H + LT G ++S G GQ G+ +N R EI IV+++ + LA+
Sbjct: 123 HCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALE 182
Query: 194 SDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S G + WG +++GQ+ + P +++ G+ I +A+G S +L G V+
Sbjct: 183 STDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIP-ICQLAAGASHSLVLTPSGTVF 241
Query: 253 SWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
WG + GQ G R + L PS + + KV L G A+T G L+
Sbjct: 242 GWGKNMFGQIGQNEQRDI---LYPSLV----KLLRTQKVIRLACGEDFSVAVTATGGLFT 294
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
+G YGQLG G + FP +V
Sbjct: 295 FGAGTYGQLGHGNQNSELFPKQV 317
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 139 FLTESGKVYSCGWGADGQTGLGHL--NNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+ +S + CG +DGQ GLG + N + LV +I +++ + + D
Sbjct: 11 LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70
Query: 197 GDVFGWGNSEYGQISESEMQISTPRV---------LSQCKGVSRIVDVASGGSACTMLND 247
G VF GN+++ Q+ ++ P + + Q ++ VA G + C L +
Sbjct: 71 GSVFSCGNNDFYQLGHDGIK-RKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTN 129
Query: 248 EGLVYSWG---YGLLG--QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G ++SWG YG LG + V+++ P + + N + V+ +
Sbjct: 130 DGHLFSWGSNVYGQLGVERMNVVAKARYPRI--------QEINLANIVQIACGSNHSLAL 181
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVE 326
+ G L+ WG N +GQLG+GT E
Sbjct: 182 ESTDGVLHAWGLNDHGQLGIGTRE 205
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSEYGQISE---SEMQISTPRVLSQCKGVSRIVDVASG 238
++ A+ C+L + K + GN+ GQ+ +E + + ++ K +I +A G
Sbjct: 1 MAYAISCILKLILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACG 60
Query: 239 GSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKPTL-----IPSTLFGQHQFNPKSK 289
ML D+G V+S G Y L G K ++ L + + G H
Sbjct: 61 RHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIH------- 113
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
V S+ G A+TN GHL+ WG N YGQLG+
Sbjct: 114 VISVACGDAHCVALTNDGHLFSWGSNVYGQLGV 146
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I +I+CG T++ TK KL+ CG N +LG+ PR + +++V L
Sbjct: 37 LDIKEISCGEKHTLIVTKDG----KLYSCGSNEYGELGHSKPRSRAVSIDVV------EL 86
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S Q+ A G ++VIT F++G N GQ GRG + +E+ + ++A
Sbjct: 87 VSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAV 146
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-----HLNNQETPCLVRGEIE 176
++ CG +H L LT+ G+++S G GQ GLG H Q+ CL
Sbjct: 147 C---TVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCL-----R 198
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGV--SRIV 233
G I +++S + ++ VFGWG + +GQ+ E S P + CK + +++
Sbjct: 199 GIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTL---CKSLRNQKVM 255
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ 261
++ G L EG V+S+G G GQ
Sbjct: 256 YISCGEDHTVALTKEGGVFSFGAGGFGQ 283
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 31/317 (9%)
Query: 27 LFGCGLNSDSQL--GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
+FG G ++D QL G+ + +P E+ + IK ++ G HT+++T
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVS----------RLQELDIKEISCGEKHTLIVT 53
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ ++ G+N +G+ G + ++ L +++ A G + +L +T +G
Sbjct: 54 KDGKLYSCGSNEYGELGHSKPRSRAVSID-VVELVSSLSSMQVIQAAGGSEFSLVITTAG 112
Query: 145 KVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
+V+S G GQ G G L+ +E P L++ + +V+++ + LA++D G +F W
Sbjct: 113 EVFSWGRNDKGQLGRGKLSKEEERKPKLMKS-LAVCTVVQITCGANHCLALTDDGRLFSW 171
Query: 203 GNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
G ++YGQ+ S TP+ + +G+ I +ASGG+ +L V+ WG +G
Sbjct: 172 GCNKYGQLGLGSSHSFHDTPQQIVCLRGIP-IAQIASGGNHSFILTWSRAVFGWGKNSFG 230
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG + +S PTL S KV + G A+T G ++ +G +
Sbjct: 231 QLGLNDEYDKS-HPTLCKSL--------RNQKVMYISCGEDHTVALTKEGGVFSFGAGGF 281
Query: 318 GQLGLGTVEDQPFPLKV 334
GQLG + +++ P +V
Sbjct: 282 GQLGHNSTQNEILPKRV 298
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
G F +G ++ GQ G +E ++ L+ I + CG+ HTL +T+ GK+Y
Sbjct: 3 GVFGWGRSNDGQLSIGFSEETSILSP---KEVSRLQELDIKEISCGEKHTLIVTKDGKLY 59
Query: 148 SCGWGADGQTGLGHLNNQETPCLVR-----GEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
SCG G+ LGH + + + ++++ + + L ++ G+VF W
Sbjct: 60 SCGSNEYGE--LGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSW 117
Query: 203 GNSEYGQISESEMQISTPR--VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
G ++ GQ+ ++ R L + V +V + G + C L D+G ++SWG YG
Sbjct: 118 GRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYG 177
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G S P I L G P +++ S G +F +T ++ WGKN +
Sbjct: 178 QLGLGSSHSFHDTPQQI-VCLRGI----PIAQIAS--GGNHSF-ILTWSRAVFGWGKNSF 229
Query: 318 GQLGLGTVEDQPFP 331
GQLGL D+ P
Sbjct: 230 GQLGLNDEYDKSHP 243
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ I CG + T +LF G N QLG + + ++ IP
Sbjct: 149 VVQITCGANHCLALTDDG----RLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIP--- 201
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I +A+G H+ ++T + F +G NSFGQ G + E D C + L
Sbjct: 202 ------IAQIASGGNHSFILTWSRAVFGWGKNSFGQLG--LNDEYDKSHPTLCKS---LR 250
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+K+M CG+DHT+ LT+ G V+S G G GQ G N+ P V E+ G I ++
Sbjct: 251 NQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVM-ELMGSVISQV 309
Query: 184 SSAVDCVLAVS-DKGDVFGWGNSEYG-------QISESEMQISTPRVLSQCKGVSRIVD- 234
+ +A S G ++ +G+ G S I +P S + +S+++D
Sbjct: 310 ACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDTSARNSPFPILSPNFPSTGRRLSQVMDH 369
Query: 235 ---------VASGGSACTML 245
+ SGG C +L
Sbjct: 370 DGSLYLVKHLYSGGDHCLLL 389
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 34/319 (10%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVIT 84
KLF G N LG H P K IP VK + +I A G H + +
Sbjct: 59 KLFTWGWNQRGTLG-HPPETKTE---------NIPSQVKALANAKIVQAAIGGWHCLAVD 108
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE----GEKIMDAVCGQDHTLFL 140
D A+ +G N +GQCG +++D G+ +I + + G H++ L
Sbjct: 109 DQGRAYAWGGNEYGQCGEEPERKDD-TGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVL 167
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G V++ WG G + TP V+G +E R++ + + + LA+ + G ++
Sbjct: 168 TREGHVWT--WGQPWPPG--DIKQISTPVRVQG-LEKVRLIAVGAFHN--LALLEDGILW 220
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WGN+EYGQ+ + Q + + Q +VD+A+GG T L D+G VY WG +G
Sbjct: 221 AWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHG 280
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G S M P + Q + + + G A+T G ++ +G+ +
Sbjct: 281 RLGFGDDKSSKMVPQKV--------QLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDH 332
Query: 318 GQLGLGTVEDQPFPLKVAV 336
G+LG G P++V +
Sbjct: 333 GRLGYGRKVTTGHPMEVPI 351
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
++G+ GQ G G +E++ W C + L + + V G ++L + E GK+++
Sbjct: 9 ISWGSGEDGQLGIGNNEEKE----WVC-AVKALAAQNVCSVVAGSRNSLAICEDGKLFTW 63
Query: 150 GWGADGQTGLGHLNNQET---PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH +T P V+ + +IV+ + LAV D+G + WG +E
Sbjct: 64 GWNQRGT--LGHPPETKTENIPSQVKA-LANAKIVQAAIGGWHCLAVDDQGRAYAWGGNE 120
Query: 207 YGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + T R L +C + VA+GG+ +L EG V++WG
Sbjct: 121 YGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ-- 178
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P +K P + G KV + G A+ G L+ WG N+YG
Sbjct: 179 ----PWPPGDIKQISTPVRVQGL------EKVRLIAVGAFHNLALLEDGILWAWGNNEYG 228
Query: 319 QLGLGTVEDQPFPLKV 334
QLG G + + P+ V
Sbjct: 229 QLGTGDTQPRSQPIAV 244
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ S G G DGQ G+G+ +E C V+ + + + + + LA+ + G +F WG +
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKA-LAAQNVCSVVAGSRNSLAICEDGKLFTWGWN 66
Query: 206 EYGQISESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ G + + T + SQ K + ++IV A GG C ++D+G Y+WG YG G
Sbjct: 67 QRGTLGHPP-ETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 125
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
+ P+ L Q + K V + AG +T GH++ WG+
Sbjct: 126 EEPERKDDTGRPLRRDITIPQ-RCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ 178
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G H ++ T++ + +G+N + Q G G QG +L +K
Sbjct: 75 -KISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN----QGITPVQVCTNLLIKK 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L+ G +Y+ G+ GQ G G NQ TP V ++G+ +V ++
Sbjct: 130 VVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV G+V+GWG + GQ + + Q+ TP ++ GV I+ +A G +
Sbjct: 190 QTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHGVC-ILQIACGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K S + P I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-SNQLSPVQI---------MMEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 298 SAAKTQSGQVYMWGQ 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I IT N+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYITHNDEVFVFGLNCSNCLGTG-----DNQSTIVPKKLEALCGKKISSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + TE G+VY+ G Q G G N TP V + +++V+++ +A+
Sbjct: 84 GPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S GD++ WG + GQ+ S S TPR +S C +V +A G ++ + G VY
Sbjct: 144 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H + + G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHGVC----ILQIACGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q P+++ + ++
Sbjct: 255 YAWGANTYGQLGTGNKSNQLSPVQIMMEKER 285
>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
CCMP2712]
Length = 312
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ +A G HT+ +TD G N Q G G E ++ L ++++
Sbjct: 7 HVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEP---QQVSTLRWKRVV 63
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
+ CG H L G VYS G G+ G+ GLG+ + PC V G E ER V +++
Sbjct: 64 EMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGE-ERCVSVAAGYY 122
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LND 247
AV + G +F WGN GQ+ + + V + G + GG ++ + D
Sbjct: 123 HSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTD 182
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G ++SWG G LG G + R +P I S L G +K+ GP AI+
Sbjct: 183 VGSLWSWGLNNDGQLGHGDE-ERCGRPKGI-SELVG-------TKISCFSCGPNFNVAIS 233
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQ-----------PFPLKVAVGGQ 339
N ++ WG N+YGQLG G +Q P L V+ GG+
Sbjct: 234 NGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGR 279
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 47/332 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +A G T+ T + ++ CG N QLG ++ P +S +R
Sbjct: 8 VVQVAAGGDHTLFLTDAG----RVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRW---- 59
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G AH +V + +++G S G+ G G + K ++ L
Sbjct: 60 ----KRVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCK-----VSGLG 110
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
E+ + G H+ + E GK+++ G G GQ G G + P V G+R +
Sbjct: 111 EERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAV 170
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
L ++D G ++ WG + GQ+ E + P+ +S+ G ++I + G +
Sbjct: 171 RGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVG-TKISCFSCGPNFN 229
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKV--------SRSMKPTLIPSTLFGQHQFNPKSKVE 291
+++ V+SWG YG LG G KV S S P ++ + G+H K
Sbjct: 230 VAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRK-- 287
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G ++ WG N+ G LG+G
Sbjct: 288 ---------------GRIWAWGCNESGCLGIG 304
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 146/346 (42%), Gaps = 49/346 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I+ + CG T + S ++ G +LG+ GN +L IP P
Sbjct: 67 EISSVTCGADHTTALSNSTKT---VYSWGWGDFGRLGH------GNSSDLF-----IPQP 112
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K ++K +A G +H + IT + +G N GQ G G ED H +
Sbjct: 113 IKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLG--HTEDVLTP---HKLTA 167
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG + G +HT +TE+GK+Y GWG G GLG ++ P V + GE +
Sbjct: 168 FEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQV-AAVAGELMK 226
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ + V++ G+++ +G S+YGQ+ + Q +I + G
Sbjct: 227 MVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRH 286
Query: 242 CTMLNDEGLVYSWGYGLLGQ----------GPKVSRSMKPTLIPSTLFG-QHQFNPKSKV 290
L+ +G +Y WG+ GQ P++ + ++ ++ G +H
Sbjct: 287 TFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTL------ 340
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T+ G++Y WG+ GQLG G D+ P ++ +
Sbjct: 341 -----------AMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEI 375
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 57/312 (18%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
Q+ L+ G +H++ + + ++G GQ G G +E + F ++ L+ +I
Sbjct: 15 QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEE-----RHFPTIVSALDDCEIS 69
Query: 129 DAVCGQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG DHT L+ S K VYS GWG G+ G G+ ++ P ++ ++G + +++
Sbjct: 70 SVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKA-LKGLEVKQIACGD 128
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G+V GWG ++ GQ+ + + TP L+ +GV+ + +A+G T +
Sbjct: 129 SHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVA-VKMLAAGAEHTTAVT 187
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS--------------------------- 276
+ G +Y WG YG LG G + R + P + +
Sbjct: 188 ENGKLYGWGWGRYGNLGLGDREDR-LVPDQVAAVAGELMKMVACGWRHTICVAESGNMYT 246
Query: 277 ---TLFGQ------------HQFNP--KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ +GQ HQ K++++ G A+ + G LY WG N++GQ
Sbjct: 247 FGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQ 306
Query: 320 LGLGTVEDQPFP 331
+G G EDQ P
Sbjct: 307 VGCGNTEDQSSP 318
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 30/249 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +A G T T+ N KL+G G LG D + P ++ +
Sbjct: 171 VAVKMLAAGAEHTTAVTE----NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL-- 224
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HTI + ++ +TFG + +GQ G G D+ H +
Sbjct: 225 --------MKMVACGWRHTICVAESGNMYTFGWSKYGQLGHG-----DFADHLIPHQVQA 271
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ +KI G HT L G++Y GW GQ G G+ +Q +P LV+G ++ + +
Sbjct: 272 LKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-LQDQVVT 330
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGS 240
+ LA++D+G+V+ WG GQ+ + + STP+ RI ++S G
Sbjct: 331 VVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPK---------RIEILSSDGF 381
Query: 241 ACTMLNDEG 249
AC + G
Sbjct: 382 ACEQIESSG 390
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G + P +V ++ I ++
Sbjct: 14 RQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSA-LDDCEISSVT 72
Query: 185 SAVDCVLAVSDKGD-VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D A+S+ V+ WG ++G++ + + P+ + KG+ + +A G S C
Sbjct: 73 CGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGL-EVKQIACGDSHC 131
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +G V WG G LG G + L P L V+ L AG
Sbjct: 132 LAITTDGEVLGWGRNQNGQLGLG-----HTEDVLTPHKLTAFEGV----AVKMLAAGAEH 182
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T G LY WG +YG LGLG ED+ P +VA
Sbjct: 183 TTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAA 219
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 30/290 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G+ HT+ +T +++G++S+GQ G G + + + + L G++ +
Sbjct: 829 HVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVG---DRNVHSRPVA--VEALSGQRCL 883
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CGQ HTL LT+ +++S GWG GQ G G + +Q P LV ++ IV +S+
Sbjct: 884 SVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLV-NQLSKCAIVGISAGYA 942
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG-GSACTMLND 247
A+++ G V+ +G+S +GQ+ + ST V + + + G S + ++
Sbjct: 943 HSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSN 1002
Query: 248 EGLVYSWGYG---------LLGQGPKVSRSMKP-------TLIPST-LFGQHQF------ 284
VY+WG L + + SR P T +PS L QH
Sbjct: 1003 PQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPSLVPT 1062
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
N ++ ++ + + +T G LY WG N+ GQLG+G Q P+ +
Sbjct: 1063 NIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLI 1112
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLG---HLNNQETPCLVRG-EIEGERIVKLSSAV 187
CGQDH + +G VY+ G +G+ G G L+ + P V + G + ++
Sbjct: 779 CGQDHAAIVA-NGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVACGK 837
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+ +AV+ +G ++ WG+S YGQ+ + + + V + R + VA G +L
Sbjct: 838 EHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQ 897
Query: 248 EGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ ++S+G+G+ GQ V + P L+ +Q + K + + AG GA+TN
Sbjct: 898 DQRLWSFGWGVHGQLGHGDVEDQILPKLV-------NQLS-KCAIVGISAGYAHSGALTN 949
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++M+G + +GQLG G++ P+++
Sbjct: 950 DGQVWMFGSSSFGQLGTGSIGKSTVPVRL 978
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 23/274 (8%)
Query: 49 PLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE 108
P + + S R+P+ + P+ + LA G+ H ++ N +T+G G+ G+G +
Sbjct: 755 PEDTLNSSDRLPVGLLLPTQNV--LACGQDHAAIVA-NGDVYTWGRAHEGRLGQGDIMSL 811
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
D + + G + CG++HT+ +T+ GK+YS G + GQ G+G N P
Sbjct: 812 DGRAPPLRVETLHMHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRP 871
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDV--FGWGNSEYGQISESEMQIST-PRVLSQ 225
V + G+R + ++ L ++ + FGWG +GQ+ +++ P++++Q
Sbjct: 872 VAVEA-LSGQRCLSVACGQLHTLVLTQDQRLWSFGWG--VHGQLGHGDVEDQILPKLVNQ 928
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH 282
+ IV +++G + L ++G V+ +G +G LG G + +S P + + L H
Sbjct: 929 LSKCA-IVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTG-SIGKSTVPVRLKA-LSSHH 985
Query: 283 QFNPKSKVESLIAGPCTFGAIT-NFGHLYMWGKN 315
V L G + AIT N +Y WGK+
Sbjct: 986 -------VSILTCGYYSNIAITSNPQKVYTWGKS 1012
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TD++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ + +
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+V+ WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 AWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P V V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHVMVEKER 285
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 26/255 (10%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G QG +L +++
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+VY+ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 131 VEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
+AV D G+V+ WG + GQ + + Q++ RV + V++IV G +
Sbjct: 191 TSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K + + P H K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HVMVEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 116/251 (46%), Gaps = 21/251 (8%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
F +G++ GQ G GI + Q + L G+++ CG+ HT + + G +Y
Sbjct: 2 ATFCWGSSMEGQLGIGITGGQTTQE--VAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLY 59
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
CG + GQ LG NQ P V +E I ++ D LAVSD+G V GWG ++
Sbjct: 60 MCGANSKGQ--LGQDRNQYKPVQVSA-LETVVIKHVACGDDHTLAVSDRGQVLGWGRNDR 116
Query: 208 GQISESEMQIST---PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + I PR+L + V V G L +G ++SWG YG LG
Sbjct: 117 GQCGLATGDIENKPRPRILKHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGI 175
Query: 262 GPKVSR-SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G V+ + +PT + S V G +F A+T G ++ WGKN GQL
Sbjct: 176 GTLVTNYTDRPTELTS-------LRGVPLVRVACGGFHSF-ALTISGSVFGWGKNDVGQL 227
Query: 321 GLGTVEDQPFP 331
GLG E++ +P
Sbjct: 228 GLGNKENKAYP 238
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 70/367 (19%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP- 62
IT + CG T+V SK + L FG G++ QLG + R NP R+P P
Sbjct: 301 ITQVTCGKHHTLVLEGSKGR-LYAFGQGIHG--QLGQDEARSCSNP-------QRVPGPW 350
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD- 121
V H ST+ + GR + F+ N+ +D Q K +I+
Sbjct: 351 VPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNA----------ADDIQIKLLFRDISTR 400
Query: 122 -----------------------LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQ 156
LE I CG DHTL +++ +V GWG + GQ
Sbjct: 401 IFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSD--RVQVLGWGRNDRGQ 458
Query: 157 TGL--GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE 214
GL G + N+ P ++R + + VK+ +A++ G +F WG++ YGQ+
Sbjct: 459 CGLATGDIENKPRPRILR-HLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGT 517
Query: 215 M---QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRS 268
+ P L+ +GV +V VA GG L G V+ WG G LG G K ++S
Sbjct: 518 LVTNYTDRPTELTSLRGVP-LVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKS 576
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
PTL+ N +S++ IA G +T G ++++G+ GQLG G+ +
Sbjct: 577 Y-PTLLR---------NMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYN 626
Query: 328 QPFPLKV 334
+ P KV
Sbjct: 627 EVNPRKV 633
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 137/344 (39%), Gaps = 47/344 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ I+CG T + L+ CG NS QLG R + P+++
Sbjct: 38 RVQSISCGKHHTGIVLDDG----TLYMCGANSKGQLG--QDRNQYKPVQVSAL------- 84
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ IKH+A G HT+ ++D +G N GQCG + D + K + L
Sbjct: 85 ---ETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCG---LATGDIENKPRPRILKHL 138
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL--NNQETPCLVRGEIEGERI 180
+ + CG H++ LT G+++S G GQ G+G L N + P + + G +
Sbjct: 139 ASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELT-SLRGVPL 197
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V+++ A++ G VFGWG ++ GQ+ + L + + +A G
Sbjct: 198 VRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQD 257
Query: 241 ACTMLNDEGLVYSWGYGLLGQ----------GPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
ML +G V+ +G G GQ P+ + + I G+H
Sbjct: 258 HTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHH------- 310
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + G LY +G+ +GQLG P +V
Sbjct: 311 --------TLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 346
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G HT+ ++D +G N GQCG + D + K + L + +
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCG---LATGDIENKPRPRILRHLASYQFVK 485
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL--NNQETPCLVRGEIEGERIVKLSSAV 187
CG H++ LT G+++S G GQ G+G L N + P + + G +V+++
Sbjct: 486 VCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELT-SLRGVPLVRVACGG 544
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A++ G VFGWG ++ GQ+ + + L + + +A G ML
Sbjct: 545 FHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTA 604
Query: 248 EGLVYSWGYGLLGQ----------GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+G V+ +G G GQ P+ + + I G+H
Sbjct: 605 DGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHH-------------- 650
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + G LY +G+ +GQLG P +V
Sbjct: 651 -TLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 25/280 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I +ACG T+ + +++ G G N Q G + P ++ +
Sbjct: 427 VVIKHVACGDDHTLAVSD----RVQVLGWGRNDRGQCGLATGDIENKPRPRILRHL---- 478
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S Q + G H++ +T + F++G+N++GQ G G + +Y + +
Sbjct: 479 ----ASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTL-VTNYTDR--PTELTS 531
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGER 179
L G ++ CG H+ LT SG V+ GWG + GQ GLG+ N+ P L+R + +
Sbjct: 532 LRGVPLVRVACGGFHSFALTISGSVF--GWGKNDVGQLGLGNKENKSYPTLLR-NMRSQM 588
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ ++ D ++ G VF +G GQ+ S PR + G S I V G
Sbjct: 589 VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMG-SDITQVTCG 647
Query: 239 GSACTMLN-DEGLVYSWGYGLLGQ-GPKVSRS-MKPTLIP 275
+L +G +Y++G G+ GQ G +RS P +P
Sbjct: 648 KHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVP 687
>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 38/275 (13%)
Query: 69 QIKHLATGRA--HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+++H A+G + H+I++ ++ +FG N GQ G G + D I L+
Sbjct: 112 RVRHAASGPSACHSIIVCEDGRVMSFGRNDKGQLGHGTTERCDVP-----KVIDRLKMHN 166
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSS 185
I+ A CG+ HTL LT++G V+ G GQ G GH PC ++ +++ K+
Sbjct: 167 IVQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCC 226
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR----------- 231
+ + + + GD+F +G+ EYGQ+ ++ + +S+ ++ QC+ + R
Sbjct: 227 GAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKD 286
Query: 232 ----------IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
I DV G + L+++G V++WG+G G G + K +P L
Sbjct: 287 GFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFG--GYGRLGHQQPKDEHVPRLLT-- 342
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
FN K + AG T+ G LY WG+ +
Sbjct: 343 -FFNTKGNPSVIFAG-STYSMAVCMGQLYFWGQTK 375
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 125/293 (42%), Gaps = 55/293 (18%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M I +CG G T++ T D L +FG G N Q+G + P P
Sbjct: 164 MHNIVQASCGRGHTLILT---DAGL-VFGFGDNKLGQIGQGHQKPTSLPC---------P 210
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG------------------ 101
L + HP+ ++ + G ++++ +N F+FG+ +GQ G
Sbjct: 211 LQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQC 270
Query: 102 -----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
R +V E + + H +EG KI D VCG +HT+ L E G+V++ G+G G+
Sbjct: 271 EVLPRRLVVFVERNKDGFVNH----IEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGR 326
Query: 157 TGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM 215
G ++ P L+ +G V + + + G ++ WG ++ Q E+ M
Sbjct: 327 LGHQQPKDEHVPRLLTFFNTKGNPSVIFAGSTYSMAVC--MGQLYFWGQTK--QSGEAAM 382
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPK 264
P+ + G ++ V S+ + D+ +V SWG YG LG G K
Sbjct: 383 Y---PKPVQDLSGW-QVRSVGCSKSSIVIAADDSVV-SWGPSPTYGELGYGLK 430
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 15/268 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQGKWFCHNIADLEGEKIMDA 130
+A G HT+++ D+ G + G+NS GQ GR + QE+ G I LE +K++
Sbjct: 42 VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPEL---IQALETQKVVHV 98
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
CG++H+L + G+VYS G G GQ G G L ++ P + + ++++++ D
Sbjct: 99 SCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINA-LSKYKVIQVACGHDHS 157
Query: 191 LAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+A+++ G +F WG + +GQ + + ++P+ +S G+ + VA+GG+ L+
Sbjct: 158 IALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIP-LAQVAAGGAHSFALSLS 216
Query: 249 GLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
G+VY WG Q G ++ + P ++ + V + G +T G
Sbjct: 217 GVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLD----VAFVSCGAEHTAVLTQNG 272
Query: 308 HLYMWGKNQYGQLGLGTVEDQPF-PLKV 334
+Y +G + GQLG + F P KV
Sbjct: 273 SVYTFGDDSAGQLGRNSSSSPKFGPQKV 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 139/312 (44%), Gaps = 37/312 (11%)
Query: 30 CGLNSDSQLGYHDP---RKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
CG NS QLG P K+ EL+ + + ++ H++ G+ H++ + +
Sbjct: 61 CGDNSRGQLGRRLPSGQEKRSYGPELIQAL---------ETQKVVHVSCGKEHSLAVCNK 111
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+++G +FGQ G G + + I L K++ CG DH++ LT G++
Sbjct: 112 GRVYSWGAGTFGQLGTG-----ELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRI 166
Query: 147 YSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+S G GQ GLG +++Q +P V ++G + ++++ A+S G V+GWG +
Sbjct: 167 FSWGQNIHGQLGLGKDISSQASPQQVSA-LDGIPLAQVAAGGAHSFALSLSGVVYGWGRN 225
Query: 206 EYGQISESEM----QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
Q+ S+ QI P ++ + + + V+ G +L G VY++G GQ
Sbjct: 226 NAHQLGLSQAKPKEQIFKPYSIAALRSLD-VAFVSCGAEHTAVLTQNGSVYTFGDDSAGQ 284
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC----TFGAITNFGHLYMWGKNQY 317
+ S S S FG + SL+A C T I+ G L +G+
Sbjct: 285 LGRNSSS-------SPKFGPQKVEWIDGPVSLLA--CGSYHTLVRISTSGQLLSFGRGPL 335
Query: 318 GQLGLGTVEDQP 329
+ GT + +P
Sbjct: 336 QRNRSGTTQSKP 347
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET----PCLVRGEIEGERI 180
+ ++ CG+ HTL L + G V SCG + GQ G + QE P L++ +E +++
Sbjct: 37 QAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQA-LETQKV 95
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGG 239
V +S + LAV +KG V+ WG +GQ+ E+ P+ ++ +++ VA G
Sbjct: 96 VHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY-KVIQVACGH 154
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L ++G ++SWG +G LG G +S P + S L G + + AG
Sbjct: 155 DHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQV-SALDG-------IPLAQVAAG 206
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
A++ G +Y WG+N QLGL + +
Sbjct: 207 GAHSFALSLSGVVYGWGRNNAHQLGLSQAKPK 238
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++G G N+ QLG + P E + I S + ++ G HT V+T N
Sbjct: 219 VYGWGRNNAHQLGL----SQAKPKEQIFKPYSI---AALRSLDVAFVSCGAEHTAVLTQN 271
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGK 145
+TFG++S GQ GR K+ + ++G + A CG HTL ++ SG+
Sbjct: 272 GSVYTFGDDSAGQLGRN----SSSSPKFGPQKVEWIDGPVSLLA-CGSYHTLVRISTSGQ 326
Query: 146 VYSCGWG 152
+ S G G
Sbjct: 327 LLSFGRG 333
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TD++ F FG N G G D + L G+KI G
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSSCLGTG-----DNHSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN S LG D P +L +
Sbjct: 24 ACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGLAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVIEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 24/261 (9%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
++IT ++ + G+N+ G G G D ++ + L G+ I G+ H L
Sbjct: 37 LIITRDKIVYALGSNTSGCLGTG-----DDCNTFYPKKVEALCGKDIKTFAYGKGPHVLA 91
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LTE GKVYS G + G+ G NN P LV + E IV ++ LA++++G V
Sbjct: 92 LTEEGKVYSWGHNSHGELGNCFANNM-IPMLVTRNLSDEFIVDIACGSHHSLALTNEGKV 150
Query: 200 FGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
+ WG + GQ+ +S + +TP ++ ++ ++ G S+ + D G VY WG
Sbjct: 151 YAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVICISCGQSSSMTVTDTGKVYGWGCND 210
Query: 256 YGLLGQGPKVSR--SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G V++ K T++ + +E ++ G A++N G LY+WG
Sbjct: 211 VGQLGIGNYVNQVDPCKVTMLAGVV-----------IEKIVCGYAHVLALSNKGALYVWG 259
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N YGQLGLG + P+++
Sbjct: 260 GNNYGQLGLGMKMNICSPVQL 280
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK A G+ H + +T+ +++G+NS G+ G + N++D E I+
Sbjct: 78 IKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCFAN--NMIPMLVTRNLSD---EFIV 132
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
D CG H+L LT GKVY+ G GQ G N+ TP V + G+ ++ +S
Sbjct: 133 DIACGSHHSLALTNEGKVYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVICISCGQS 192
Query: 189 CVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ V+D G V+GWG ++ GQ I Q+ P ++ GV I + G + L+
Sbjct: 193 SSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVD-PCKVTMLAGVV-IEKIVCGYAHVLALS 250
Query: 247 DEGLVYSWG---YGLLGQGPKVS 266
++G +Y WG YG LG G K++
Sbjct: 251 NKGALYVWGGNNYGQLGLGMKMN 273
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAV 193
+ L +T VY+ G G G G N P V + G+ I + VLA+
Sbjct: 34 NEALIITRDKIVYALGSNTSGCLGTGDDCNTFYPKKVEA-LCGKDIKTFAYGKGPHVLAL 92
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+++G V+ WG++ +G++ P ++++ IVD+A G L +EG VY+
Sbjct: 93 TEEGKVYSWGHNSHGELGNCFANNMIPMLVTRNLSDEFIVDIACGSHHSLALTNEGKVYA 152
Query: 254 WGYGLLGQ-GPKVS-RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
WG GQ G V+ P + S+L G+ V + G + +T+ G +Y
Sbjct: 153 WGENTSGQVGKSVNINENTPMKVNSSLAGK-------TVICISCGQSSSMTVTDTGKVYG 205
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVAV 336
WG N GQLG+G +Q P KV +
Sbjct: 206 WGCNDVGQLGIGNYVNQVDPCKVTM 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I DIACG ++ T K++ G N+ Q+G + P+++ S
Sbjct: 131 IVDIACGSHHSLALTNEG----KVYAWGENTSGQVGKSVNINENTPMKVNSSL------- 179
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ++ G++ ++ +TD + +G N GQ G G +Y + + L
Sbjct: 180 --AGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIG-----NYVNQVDPCKVTMLA 232
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G I VCG H L L+ G +Y G GQ GLG N +P ++ E +
Sbjct: 233 GVVIEKIVCGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNICSPVQLKQEAMRRVLDVA 292
Query: 184 SSAVDCV-LAVSDKGDVFGWGN-----------SEYGQISESEMQISTPRVLSQ 225
+S + + +A+++ +F WG + G + + + ++PRV+ Q
Sbjct: 293 TSHYNHISIAMAEGNRIFMWGECLGQSITFPVLTTLGSLHDVFARYASPRVMHQ 346
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 21/237 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G N +GQ G G E+ C + D + ++ G HT++LT + KVYSC
Sbjct: 2 YGWGKNDYGQLGLG---SENMLIS--CPSPID-ANQSVISIASGLRHTVYLTSTRKVYSC 55
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ LG +Q P LV G E I +++ +A+++ G +FGWG S G+
Sbjct: 56 GSNEFGQ--LGQQKSQCRPSLVTG-FGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGE 112
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + + P++L + S +V VA G C L +EG + SWG G LG G
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWS-VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI 171
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
++PT+I S + + AG G ++ G L+ WGKN +GQLG G
Sbjct: 172 EFLEPTIIASL--------NAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 28/286 (9%)
Query: 56 FVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+ P P+ + I +A+G HT+ +T ++ G+N FGQ G Q K
Sbjct: 20 LISCPSPIDANQSVIS-IASGLRHTVYLTSTRKVYSCGSNEFGQLG---------QQKSQ 69
Query: 116 CHN--IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
C + E+I G ++ + ESG ++ G +G+ + E L
Sbjct: 70 CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLHEPKLL--D 127
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSR 231
+I +V+++ +A++++G + WG++ GQ + SE++ P +++
Sbjct: 128 KIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFP- 186
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I + +G +L+ G +++WG +G LG G S P L+ + +HQ
Sbjct: 187 ISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTL---RHQ----- 238
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+V + G T G ++ WG GQLG ++ + P K+
Sbjct: 239 EVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKI 284
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G H I +T+ ++G+N+ GQ G G + E + IA L I
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTI----IASLNAFPISQ 189
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN---QETPCLVRGEIEGERIVKLSSA 186
G H+ L+ SG +++ WG + LGH N+ Q +P LV+ + + +V ++
Sbjct: 190 ICAGAYHSGVLSPSGTLFT--WGKNNWGQLGHGNSDSFQSSPRLVK-TLRHQEVVFVAMG 246
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTML 245
+ + + G VF WG+ GQ+ + M ++ P+ + + G + + + G L
Sbjct: 247 EEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTT-VCQICCGRRHTISL 305
Query: 246 NDEGLVYSWGYGL-----LGQGPKVSRSMKPTLIPSTLFGQHQFN 285
D+ + G+GL LG S + P IP +L Q +
Sbjct: 306 TDKRKLL--GFGLNSNNQLGTHNDTSARL-PITIPISLTDDRQLS 347
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G HT V+T N + FG+N +GQ G G ++ K C + L+ EK AV
Sbjct: 43 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLG---SKNTVRKPTC--VKALKPEKTKLAV 97
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G ++GQ GLG + T L+ +I +L++
Sbjct: 98 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 157
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV++ G +F WG++ GQI ++ +S P + K VS I + G + +G
Sbjct: 158 AVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI---SCGYYHSAFITGDGE 214
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
+Y++G G+ + +K + +P + G + KV + G +T G +Y
Sbjct: 215 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-----KVNKVACGGEHTVVLTETG-VY 268
Query: 311 MWGKNQYGQLGLGTV 325
+G QYGQLG GT+
Sbjct: 269 TFGLGQYGQLGHGTL 283
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
++ I+CGY + T + L+ G + +LG P +L S R+P PV
Sbjct: 196 VSSISCGYYHSAFITGDGE----LYTFGEPENGKLGLL-------PEQLKNS--RVPQPV 242
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ G +TFG +GQ G G + + K H L
Sbjct: 243 LGIMEKVNKVACGGEHTVVLTET-GVYTFGLGQYGQLGHGTLLFKTSVPKSVKH----LR 297
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
KI + CG+ HT + E+G +++ G G G+ GLG N NQ P L
Sbjct: 298 SHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPAL 346
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 31/239 (12%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
FTFG ++F E+ K++ N +K + CG +HT +T +GK+Y
Sbjct: 17 AVFTFGKSNFA---------ENIPSKFWFKN------DKPVHISCGDEHTAVVTGNGKLY 61
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G GQ GLG N P V+ ++ E+ + L ++KG+V+ G +
Sbjct: 62 MFGSNDWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSE 120
Query: 208 GQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
GQ+ + + T ++S +I +A+G + ++G ++ WG G +G
Sbjct: 121 GQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLAD 180
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
K S +P Q + V S+ G IT G LY +G+ + G+LGL
Sbjct: 181 KTCVS-----VPC------QVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGL 228
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M K+ +ACG TVV T++ ++ GL QLG+ ++ +P
Sbjct: 246 MEKVNKVACGGEHTVVLTET-----GVYTFGLGQYGQLGHG----------TLLFKTSVP 290
Query: 61 LPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW---FC 116
VKH S +I ++ G +HT VI +N FTFG+ G+ G G EE++ ++ C
Sbjct: 291 KSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLG---EENFANQFDPALC 347
Query: 117 HNIADLEGEKIMDAVCGQDHTLFL 140
N ++ CG H L
Sbjct: 348 SNFLSF---TVLLVACGGCHMLVF 368
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 29/256 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGT 54
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 206 EYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G + + P LI S L + AG +T G ++ WG+N++GQL
Sbjct: 171 LGIECQKQTSPQLIKSLL--------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 321 GLGTVEDQPFPLKVAV 336
GL E+ F L+++
Sbjct: 223 GLND-ENGRFSLELSA 237
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIK-SLSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
+L G ++ WG GQ
Sbjct: 203 FVLTLSGAIFGWGRNKFGQ 221
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIK-SLLG 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+++++ ++ G +FGWG +++GQ+
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +ACGY ++ +K+ + +F G N QLG +K +L+ S + IP
Sbjct: 137 IQIVQVACGYYHSLALSKASE----VFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPF 192
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
+A G AH+ V+T + F +G N FGQ G
Sbjct: 193 ---------MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
taurus]
Length = 538
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT + T N F FG+N++GQ G G + K C I L+ EK+ C
Sbjct: 85 LSCGDEHTAITTGNNKLFMFGSNNWGQLGLG---SKATVNKPTC--IKALKPEKVKFVAC 139
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL LT G+VY+ G +GQ GLG + + L+ +I +LS+ + A
Sbjct: 140 GRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAA 199
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI ++ I P ++ K +S I + G + EG +
Sbjct: 200 LTEDGELFMWGDNSEGQIGLQNITNICVPHQVTIGKPISWI---SCGYYHSAFVTTEGEL 256
Query: 252 YSWG---YGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG--AITN 305
Y++G G LG PK+ + K P L+P E +I C G +
Sbjct: 257 YTFGEPESGKLGLPPKLLVNHKVPQLVPGI------------SEKVIQVACGGGHTVVLT 304
Query: 306 FGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 305 EKAVYTFGLGQFGQLGLGT 323
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KLF G N+ QLG P + ++ P K
Sbjct: 85 LSCGDEHTAITTG----NNKLFMFGSNNWGQLGLGSKATVNKP-----TCIKALKPEK-- 133
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K +A GR HT+++T + G N+ GQ G G D + H I+ +
Sbjct: 134 ---VKFVACGRNHTLILTGGGQVYATGGNNEGQLGLG-----DTDERSAFHLISFFTSQH 185
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL ++ N C+ G+ I +S
Sbjct: 186 KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNI---CVPHQVTIGKPISWISC 242
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTM 244
V+ +G+++ +G E G++ + +V G+S +++ VA GG +
Sbjct: 243 GYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVV 302
Query: 245 LNDEGLVYSWGYGLLGQ-----------GPKVSRSMKPTLIPSTLFGQHQ 283
L E VY++G G GQ PKV S+K I G++
Sbjct: 303 LT-EKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENH 351
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+ LS + + +F +G++ +GQ+ S+ ++ P + K ++ VA G
Sbjct: 83 ISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKP-EKVKFVACGR 141
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +L G VY+ G G LG G RS + S QH K++ L AG
Sbjct: 142 NHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLI--SFFTSQH------KIKQLSAG 193
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + + P +V +G
Sbjct: 194 SNTSAALTEDGELFMWGDNSEGQIGLQNITNICVPHQVTIG 234
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T + L+ G +LG P +L+++ ++P V
Sbjct: 237 ISWISCGYYHSAFVTTEGE----LYTFGEPESGKLGL--------PPKLLVNH-KVPQLV 283
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S ++ +A G HT+V+T+ + +TFG FGQ G G E + K I ++
Sbjct: 284 PGISEKVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFTFETSEPKV----IESVK 338
Query: 124 GEKIMDAVCGQDHTLFLT 141
+KI CG++HT +T
Sbjct: 339 DKKISHVCCGENHTALIT 356
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TD++ F FG N G G D + L G+KI G
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSSCLGTG-----DNHSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN S LG D P +L +
Sbjct: 24 ACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGLAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVIEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 123/278 (44%), Gaps = 25/278 (8%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T I +A G H++ ITD +T+G+ G+ G G D + + + L E +
Sbjct: 553 TTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHG-----DMRDRAVPRKVMSLLRESV 607
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ A CG HT LT G V++ G G +G+ GLG ++TP + G +G I +
Sbjct: 608 VSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGW 667
Query: 188 DCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGV--SRIVDVASGGSACT 243
+ A+ +G VF WG + GQ + + PR + + + V S +VDVA G +
Sbjct: 668 NFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTV 727
Query: 244 MLNDEGLVYSWG---YGLLGQG----PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+L G +YSWG YG LG G P +R P ++ + G
Sbjct: 728 VLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLPA---------DALCAPDQLARVYCG 778
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A T ++ WG N YG GLG ++ P ++
Sbjct: 779 AFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERI 816
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ACGY TVV T S + L+ GL QLG G+ + + + V++P
Sbjct: 716 VVDVACGYTHTVVLTASGE----LYSWGLGEYGQLG------TGDVYQPLPARVQLPADA 765
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
Q+ + G H+I T+ F +G NS+G CG G +D + C
Sbjct: 766 LCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDC-----FS 820
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL---GHLNNQETPCLVRGEIEG 177
+ + CG +T+ L + +Y+ + QT L LN E P R EG
Sbjct: 821 SQTELVVACGHKYTIALEVNASLYT---HSPSQTMLPTGAALNGLEMPPSTRQVSEG 874
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI E+ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGQL 211
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFGA 302
Y++G G LG +P+ L H+ P V+ G T
Sbjct: 212 YTFGEPECGKLG-------------LPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT--V 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGT 278
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 30/321 (9%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T N KL+ G N+ QLG P + V+ P K
Sbjct: 38 TFLSCGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G D + + H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLG-----DTEERSTFHLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV---CVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSAC 242
S V+ +G ++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+L ++ VY++G G GQ + + T +P + + K+ + G
Sbjct: 256 VVLTEKA-VYTFGLGQFGQL-GLGTFLFETSVPKAI----EHIKDQKISFIACGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLG 330
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I+ I+CGY + T + L FG CG K G P +L+++ R+P
Sbjct: 192 ISWISCGYYHSAFVTT--EGQLYTFGEPECG-------------KLGLPNQLLVNH-RMP 235
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV ++ +A G HT+V+T+ + +TFG FGQ G G E K H
Sbjct: 236 QPVPGIPGKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--- 291
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGE 178
++ +KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L +
Sbjct: 292 -IKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFL--R 348
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
IV+L S C V + G E +I++S
Sbjct: 349 FIVQLVSCGGCHTLVFATPRLGGTEEMELKEINKS 383
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK--PEKVKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G RS T F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERS--------TFHLISFFTSQRKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG L + +P
Sbjct: 244 KVVQVACGGGHTVVLTEK-----AVYTFGLGQFGQLG----------LGTFLFETSVPKA 288
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++H Q I +A G HT +ITD +TFG+ G+ G G+ + C N
Sbjct: 289 IEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLR 348
Query: 122 LEGEKIMDAV-CGQDHTLFL 140
I+ V CG HTL
Sbjct: 349 F----IVQLVSCGGCHTLVF 364
>gi|226490228|emb|CAX69356.1| Williams-Beuren syndrome chromosome region 16 protein homolog
[Schistosoma japonicum]
Length = 220
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV----LSQC 226
V+G + ER+ LSS D VLA+++ +F WGN+EYGQI + + P L QC
Sbjct: 10 VKGALINERVCLLSSRGDTVLALTESNKLFAWGNNEYGQIWPLDQHVQVPDPIHLNLDQC 69
Query: 227 ------------KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLI 274
+ + +A GS C ++N G V+ WG+G +G GPKV+ S +PTLI
Sbjct: 70 IVPAESNLCSDNVHIGEVQSIACAGSMCCIVNKIGQVFVWGFGCIGLGPKVTHSPRPTLI 129
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ--LGLG 323
P LF N + + ++AG F + G L+ WG + G LGLG
Sbjct: 130 PPGLFIPAVVNSELCINYVVAGLHHFIVQSVDGLLWSWGAPRGGLHCLGLG 180
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 23/268 (8%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTL 138
I IT+++ + G+N G G D + + L +KI+D G H L
Sbjct: 34 AIYITNDDEVYAIGSNCSSCLGLG-----DAHSSFEPRKVDVLCKKKIVDIAFGSGPHVL 88
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
++++G++YS WG +G LG+ + + TP L+ ++G++I++++ +A+S +
Sbjct: 89 AVSKNGEMYS--WGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQE 146
Query: 197 GDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G++F WG + GQ+ S S TPR + G + +A G ++ L + G VY WG
Sbjct: 147 GEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGWG 206
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y G LG G V++ P + Q + L+ G A+++ G L+ W
Sbjct: 207 YNGNGQLGLGNNVNQP-NPCRV--------QQLQGVIISQLVCGYAHTLALSDEGSLFSW 257
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G N YGQLG G +Q P KV + G++
Sbjct: 258 GANSYGQLGTGNKANQVSPSKVPMNGER 285
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 17/240 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + ++ N +++G+N + Q G G QG +L+G+KI+ CG H++
Sbjct: 86 HVLAVSKNGEMYSWGHNGYCQLGNG----GSGQGLTPTLINTNLQGKKILRVACGSHHSM 141
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L++ G++++ G GQ G G NQ TP V I + + ++ +A+ + G+
Sbjct: 142 ALSQEGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGE 201
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
V+GWG + GQ+ + + P + Q +GV I + G + L+DEG ++SWG
Sbjct: 202 VYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGV-IISQLVCGYAHTLALSDEGSLFSWGAN 260
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
YG LG G K ++ + P+ +P + G+ + + I+ A++ G ++MWG+
Sbjct: 261 SYGQLGTGNKANQ-VSPSKVP--MNGERMVEIAASHYAHIS-----AAMSETGKVFMWGQ 312
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 24/148 (16%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IACG ++ + +N +++G G N + QLG + + NP + +
Sbjct: 186 IACGQ----TSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRV----------QQLQ 231
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
I L G AHT+ ++D F++G NS+GQ G G + K + GE+
Sbjct: 232 GVIISQLVCGYAHTLALSDEGSLFSWGANSYGQLGTGNKANQVSPSK------VPMNGER 285
Query: 127 IMD-AVCGQDH-TLFLTESGKVYSCGWG 152
+++ A H + ++E+GKV+ WG
Sbjct: 286 MVEIAASHYAHISAAMSETGKVFM--WG 311
>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
Length = 474
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 44/268 (16%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
AH+++I +N AFTFG N Q G G + E+ Q +ADL ++ A CG++
Sbjct: 116 AHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQ-------VADLADFNVIQAACGRN 168
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
HTLFLT++G VY+CG GQ G+G+ L +P R G I+K+ + + +
Sbjct: 169 HTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSP--TRISYNGPPIIKVGCGAEFSVILD 226
Query: 195 DKGDVFGWGNSEYGQ----------ISESEMQI---STPR-VLSQCKGVSR--------- 231
KG++ +G EYGQ ++ ++M + PR VL +
Sbjct: 227 IKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV 286
Query: 232 -IVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I+D A G + ++ + YSWG+G +G+ + M P LI F Q
Sbjct: 287 NIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIK---FFDTQ---NR 340
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQ 316
KV + G AI++ G LY++G+N+
Sbjct: 341 KVMRVFCGSSYSLAISDIGSLYLFGQNK 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 123/331 (37%), Gaps = 54/331 (16%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D+N K F G N SQLG+ D P ++ + A GR HT+
Sbjct: 122 DENWKAFTFGRNQLSQLGHGDTVTCEKPTQV----------ADLADFNVIQAACGRNHTL 171
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+TD + G+N GQCG G +N G I+ CG + ++ L
Sbjct: 172 FLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRISYN-----GPPIIKVGCGAEFSVILD 226
Query: 142 ESGKVYSCGWGADGQTGLG--------------HLNNQETPCLVRGE---------IEGE 178
G +++ G GQ G H Q LV E IE
Sbjct: 227 IKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV 286
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSR-IVDVA 236
I+ + + +A+ K + WG G++ +E + PR++ +R ++ V
Sbjct: 287 NIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVF 346
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G S ++D G +Y L GQ K + + P + +N S I
Sbjct: 347 CGSSYSLAISDIGSLY-----LFGQNKKTGEA---NMYPKPVQDLAGWNITS-----IGT 393
Query: 297 PCTFGAITNFGHLYMWGKN-QYGQLGLGTVE 326
T I+ L WG + YG+LGLG ++
Sbjct: 394 GYTSIVISADDSLIAWGASPTYGELGLGDLQ 424
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 65/315 (20%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ACG T+ T + ++ CG N Q G GN L + S P +
Sbjct: 160 VIQAACGRNHTLFLTDTG----TVYACGDNKSGQCGV------GNKLPTITS----PTRI 205
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH------ 117
+ I + G ++++ TFG +GQ G + G++F +
Sbjct: 206 SYNGPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGH------NTDGRYFVNSTKMSF 259
Query: 118 -------------------NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
++ +E I+D CG +HT+ + + YS G+G G+ G
Sbjct: 260 HFETQPRKVLVYMEKNKEGHVLPIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLG 319
Query: 159 LGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
++ P L++ + + +++++ LA+SD G ++ +G ++ + E+ M
Sbjct: 320 HAEQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSLAISDIGSLYLFGQNK--KTGEANMY- 376
Query: 218 STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQG--------PKV 265
P+ + G + I + +G ++ + D+ L+ +WG YG LG G PK
Sbjct: 377 --PKPVQDLAGWN-ITSIGTGYTSIVISADDSLI-AWGASPTYGELGLGDLQKSSSTPKE 432
Query: 266 SRSMKPTLIPSTLFG 280
M+ IP G
Sbjct: 433 VTRMEGMKIPMVALG 447
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IACG T+ ++S+++ L+ G +LG+ GN +L+ IP P+
Sbjct: 68 IDSIACGADHTLAYSESRNE---LYSWGWGDFGRLGH------GNSSDLL-----IPQPI 113
Query: 64 -KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+IK +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 114 IALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQK-----IQAF 168
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G I G +H++ +TE+G++Y GWG G GLG N++ P V ++ +++V
Sbjct: 169 KGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVS-SVDCDKMVM 227
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ + S P+ L +++ SGG
Sbjct: 228 VACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALS--DKLISQVSGGWR 285
Query: 242 CTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+M L GL++ WG+ GQ V ++ F Q Q +V + G
Sbjct: 286 HSMALTSTGLLFGWGWNKFGQ-VGVGDNLDHCSPVQVKFPQDQ-----RVVQISCGWRHT 339
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG G D+ P
Sbjct: 340 IAVTEKENVFSWGRGTNGQLGHGDTIDRNSP 370
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +++ ++ G +HT+ + ++G GQ G G D + ++ L+ +
Sbjct: 12 PPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHG-----DTDDRPLPTQLSALDAQ 66
Query: 126 KIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
I CG DHTL +ES ++YS GWG G+ G G+ ++ P + ++G RI +++
Sbjct: 67 HIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIA 125
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ +G+V WG ++ GQ+ + S P+ + KGV I VA+G
Sbjct: 126 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVP-IKMVAAGAEHSV 184
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ + G +Y WG YG LG G + R P + S + ++ C +
Sbjct: 185 AITENGELYGWGWGRYGNLGLGDRNDR-WNPEKVSSV-----------DCDKMVMVACGW 232
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++++ G +Y +G ++YGQLG G ED P K+
Sbjct: 233 RHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKL 269
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGA- 89
G D QLG+ D + P +L L +H I +A G HT+ +++
Sbjct: 39 GRGEDGQLGHGDTDDRPLPTQLSA------LDAQH----IDSIACGADHTLAYSESRNEL 88
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + I L+G +I CG H L +T G+V S
Sbjct: 89 YSWGWGDFGRLGHG-----NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSW 143
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG+ + P ++ +G I +++ + +A+++ G+++GWG YG
Sbjct: 144 GRNQNGQLGLGNTEDSLVPQKIQA-FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGN 202
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S ++V VA G ++ G +Y++G YG LG G
Sbjct: 203 LGLGDRNDRWNPEKVSSVD-CDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHG--- 258
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ + +L+P L Q + + G A+T+ G L+ WG N++GQ+G+G
Sbjct: 259 --NFEDSLVPQKL----QALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDN 312
Query: 326 EDQPFPLKV 334
D P++V
Sbjct: 313 LDHCSPVQV 321
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 24/278 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I IACG + T + + G N + QLG + P + + +F +P
Sbjct: 119 LRIKQIACGDSHCLAVTMEGE----VQSWGRNQNGQLGLGNTEDSLVP-QKIQAFKGVP- 172
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
IK +A G H++ IT+N + +G +G G G D +W ++
Sbjct: 173 --------IKMVAAGAEHSVAITENGELYGWGWGRYGNLGLG-----DRNDRWNPEKVSS 219
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
++ +K++ CG HT+ ++ SG +Y+ GW GQ G G+ + P ++ + + I
Sbjct: 220 VDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLIS 278
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S +A++ G +FGWG +++GQ+ + V + R+V ++ G
Sbjct: 279 QVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRH 338
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPS 276
+ ++ V+SWG G LG G + R+ P +I +
Sbjct: 339 TIAVTEKENVFSWGRGTNGQLGHGDTIDRN-SPKIIEA 375
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+++ G HT+ L V S G G DGQ G G +++ P + ++ + I ++
Sbjct: 15 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSA-LDAQHIDSIAC 73
Query: 186 AVDCVLAVSD-KGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
D LA S+ + +++ WG ++G++ + S++ I P + Q RI +A G S
Sbjct: 74 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL---RIKQIACGDSH 130
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
C + EG V SWG G LG G + + +L+P + Q ++ + AG
Sbjct: 131 CLAVTMEGEVQSWGRNQNGQLGLG-----NTEDSLVPQKI----QAFKGVPIKMVAAGAE 181
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AIT G LY WG +YG LGLG D+ P KV+
Sbjct: 182 HSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVS 218
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 143/319 (44%), Gaps = 34/319 (10%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVIT 84
+LF G N LG H P K P PV I A G H + +
Sbjct: 64 RLFTWGWNQRGTLG-HPPETKTE---------SSPAPVDALAGVSIVQAAIGGWHCLAVD 113
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG----EKIMDAVCGQDHTLFL 140
D A+ +G N +GQCG ++ED + +I +G K+ G H++ L
Sbjct: 114 DKGRAYAWGGNEYGQCGEEAERKEDGT-RALRRDIPIPQGCAPKLKVRQVAAGGTHSVVL 172
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T+ G V++ WG G + TP V+G +E +++ + + + LA+++ G ++
Sbjct: 173 TQDGHVWT--WGQPWPP--GDIKQISTPVRVQG-LENVKVIAVGAFHN--LALTEDGILW 225
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WGN+EYGQ+ + Q + + + +VD+A+GG T L EG VY+WG +G
Sbjct: 226 AWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHG 285
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G S M P + L G+ + + G A+T G ++ +G+ +
Sbjct: 286 RLGFGDDKSSHMVPQKV-ELLAGE-------DIIQVSCGGTHSVALTRDGRMFSYGRGDH 337
Query: 318 GQLGLGTVEDQPFPLKVAV 336
G+LG G P++V +
Sbjct: 338 GRLGYGRKVTTGHPMEVPI 356
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +EED+ +A L+ + V G ++L + G++++
Sbjct: 14 LAWGSGEDGQLGMGGYEEEDW-----ARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + +P V + G IV+ + LAV DKG + WG +E
Sbjct: 69 GWNQRGT--LGHPPETKTESSPAPVDA-LAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNE 125
Query: 207 YGQI-SESEMQISTPRVLSQ-------CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E+E + R L + C ++ VA+GG+ +L +G V++WG
Sbjct: 126 YGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ-- 183
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P +K P + G V+ + G A+T G L+ WG N+YG
Sbjct: 184 ----PWPPGDIKQISTPVRVQGLE------NVKVIAVGAFHNLALTEDGILWAWGNNEYG 233
Query: 319 QLGLGTVEDQPFPLKV 334
QLG G + + P++V
Sbjct: 234 QLGTGDTQPRSQPIRV 249
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
V + G G DGQ G+G ++ RG ++ + + + LA+ G +F WG
Sbjct: 13 VLAWGSGEDGQLGMGGYEEED---WARGVAALDALAVSAVVAGSRNSLAICADGRLFTWG 69
Query: 204 NSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
++ G + E++ + S+P + GVS IV A GG C ++D+G Y+WG G
Sbjct: 70 WNQRGTLGHPPETKTE-SSPAPVDALAGVS-IVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127
Query: 261 Q-GPKVSRSMKPT-LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
Q G + R T + + PK KV + AG +T GH++ WG+
Sbjct: 128 QCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ 183
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 21/237 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G N +GQ G G E+ C + D + ++ G HT++LT + KVYSC
Sbjct: 2 YGWGKNDYGQLGLG---SENMLIS--CPSPID-ANQSVISIASGLRHTVYLTSTRKVYSC 55
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ LG +Q P LV G E I +++ +A+++ G +FGWG S G+
Sbjct: 56 GSNEFGQ--LGQQKSQCRPSLVTG-FGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGE 112
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ + + P++L + S +V VA G C L +EG + SWG G LG G
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWS-VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI 171
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
++PT+I S + F + + AG G ++ G L+ WGKN +GQLG G
Sbjct: 172 EFLEPTIIASL----NAF----PISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 28/286 (9%)
Query: 56 FVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+ P P+ + I +A+G HT+ +T ++ G+N FGQ G Q K
Sbjct: 20 LISCPSPIDANQSVIS-IASGLRHTVYLTSTRKVYSCGSNEFGQLG---------QQKSQ 69
Query: 116 CHN--IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
C + E+I G ++ + ESG ++ G +G+ + E L
Sbjct: 70 CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLHEPKLL--D 127
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSR 231
+I +V+++ +A++++G + WG++ GQ + SE++ P +++
Sbjct: 128 KIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFP- 186
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I + +G +L+ G +++WG +G LG G S P L+ + +HQ
Sbjct: 187 ISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTL---RHQ----- 238
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+V + G T G ++ WG GQLG ++ + P K+
Sbjct: 239 EVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKI 284
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G H I +T+ ++G+N+ GQ G G + E + IA L I
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTI----IASLNAFPISQ 189
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN---QETPCLVRGEIEGERIVKLSSA 186
G H+ L+ SG +++ WG + LGH N+ Q +P LV+ + + +V ++
Sbjct: 190 ICAGAYHSGVLSPSGTLFT--WGKNNWGQLGHGNSDSFQSSPRLVKT-LRHQEVVFVAMG 246
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTML 245
+ + + G VF WG+ GQ+ + M ++ P+ + + G + + + G L
Sbjct: 247 EEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTT-VCQICCGRRHTISL 305
Query: 246 NDEGLVYSWGYGL-----LGQGPKVSRSMKPTLIPSTLFGQHQFN 285
D+ + G+GL LG S + P IP +L Q +
Sbjct: 306 TDKRKLL--GFGLNSNNQLGTHNDTSARL-PITIPISLTDDRQLS 347
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 153/356 (42%), Gaps = 52/356 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ CG T+ T+S ++G G QLG D + +P+P+
Sbjct: 931 VKEVVCGGEHTLARTESGS----VYGWGNGRIGQLGLGD-----------RTLHWLPVPI 975
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K + LA G AHTIV+ + FG GQ G G+ ++ K
Sbjct: 976 KTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAM----- 1030
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGE 178
I+ A CG HT LTE+G+VY+CG GQ LGH +N + P +V G + G+
Sbjct: 1031 --PSIVQAACGYCHTALLTEAGEVYTCGSAMSGQ--LGHADNLQNDRLAPKMVEG-LNGK 1085
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWG-----NSEYGQISESEMQISTPRVLSQCKGV--SR 231
RI ++ +A++D +V+ WG +S+ E + I S KG+ R
Sbjct: 1086 RIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR 1145
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR----------SMKPTLIPSTLFGQ 281
I V+ G + +G VY W Q P + R + P L+ + GQ
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205
Query: 282 HQFNPKSK--VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ KSK V+ AG +T G LY WG +GQLGLG D+ ++VA
Sbjct: 1206 ---DAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVA 1258
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 14/250 (5%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--NIADLEGEK 126
Q+ +++ G H +T+N +T+G N G+ G G D G H + + +
Sbjct: 876 QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHG-----DKSGVPQLHPKQVIFFKSKC 930
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ + VCG +HTL TESG VY G G GQ GLG P ++ + + +L++
Sbjct: 931 VKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIK-TLRKMHVTQLAAG 989
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ V G+V +G E GQ+ + V ++ + + IV A G +L
Sbjct: 990 YAHTIVVLKSGEVMVFGGGEVGQLGTGMRK--DLLVPTKLQAMPSIVQAACGYCHTALLT 1047
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+ G VY+ G + GQ L P + G N K ++ + G AIT+
Sbjct: 1048 EAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEG---LNGK-RIRFIACGSFHTIAITDL 1103
Query: 307 GHLYMWGKNQ 316
++Y WG Q
Sbjct: 1104 DNVYTWGGVQ 1113
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG F +A D N+ +G +DS RK + S V+ +
Sbjct: 1086 RIRFIACG-SFHTIAITDLD-NVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLM- 1142
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQC-----GRGIVQEE-DYQGKWFC 116
+I ++ G AH++ T + + + + Q G G+ +
Sbjct: 1143 ----GKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLV 1198
Query: 117 HNIADLEGEK----IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLV 171
I D + K + A G++ TL +TE+G +YS G GA GQ GLG ++ E +
Sbjct: 1199 SAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVA 1258
Query: 172 RGEIEGERIVKLS 184
+ E R V+L+
Sbjct: 1259 KSEESRRRSVRLT 1271
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 44/315 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG N QLG + N ++ + P+PV+ + ++ ++ G+ +++ + +
Sbjct: 196 VWACGENDYGQLGNN------NTID-----INSPIPVEGLN-KVSSISAGKYYSMALKSD 243
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+T+G N +GQ G G + + +L G I+ G H+L L + G V
Sbjct: 244 GTVWTWGENDYGQLGDGTTAT-----RLSPVQVQNLSG--IIAISSGNSHSLALKDDGTV 296
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G GQ G G N++ P V+G + G IV +S +A+ + G V+ WG++
Sbjct: 297 WAWGDNESGQLGDGTTNSKYIPSQVQG-LSG--IVSISCGFYYSMALKNDGTVWVWGDNT 353
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
GQ+ + V G+ ++ +A G + L ++G V++WG+ G LG G
Sbjct: 354 SGQLGDGTTTDRNTAV--PVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGT 411
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQL 320
KVS++ P S ++ +IA C A+ + G ++ WG NQYGQL
Sbjct: 412 KVSKNTAV--------------PISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQL 457
Query: 321 GLGTVEDQPFPLKVA 335
G GT P +V+
Sbjct: 458 GNGTFISNTTPSQVS 472
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 30/268 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G H++ + ++ +T+G N+FGQ G G ++ I+ L+G I+ C
Sbjct: 380 IACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNT-----AVPISGLDG--IIAITC 432
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H++ L + G V++ G GQ G G + TP V + G I + A
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVS-NLSG--IKSIFCGYSTSFA 489
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVL--SQCKGVSRIVDVASGGSACTMLNDEGL 250
+ G V+ WGN+EYG++ + T RV+ ++ + I ++ G S C L ++G
Sbjct: 490 LKPDGTVWAWGNNEYGELGKG----FTTRVIYPTETLNIGDIKAISIGSSHCLALKNDGT 545
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V++WG YG LG G +S+ Q + S + ++ AG A+ + G
Sbjct: 546 VWAWGDNRYGQLGDGTTTIKSLPV-----------QVSGISGITAISAGGSHSLALKSDG 594
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG+N GQLG GT ED+ P++V+
Sbjct: 595 TVWAWGQNNVGQLGDGTKEDRNTPVQVS 622
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 63/320 (19%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + G +H++ + D+ + +G+N +GQ G G + +++L G I
Sbjct: 427 IIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQ-----VSNLSG--IKS 479
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN--QETPCLVRGEIEGERIVKLSSAV 187
CG + L G V++ G G+ G G T L G+I+ I +
Sbjct: 480 IFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLNIGDIKAISI----GSS 535
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
C LA+ + G V+ WG++ YGQ+ + I + V Q G+S I +++GGS L
Sbjct: 536 HC-LALKNDGTVWAWGDNRYGQLGDGTTTIKSLPV--QVSGISGITAISAGGSHSLALKS 592
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKP--------TLIPSTLF--------------GQH 282
+G V++WG G LG G K R+ T+I + ++ G
Sbjct: 593 DGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSD 652
Query: 283 QFN-PKSK---------VESLIAGPC-TFG--AITNFGHLYMWGKNQYGQLGLGTVEDQP 329
+N P K + +IA C T+ A+ N G ++ WGKN +GQ G GT
Sbjct: 653 SYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTN 712
Query: 330 FPLKV---------AVGGQK 340
P++V AVGG +
Sbjct: 713 IPVQVSGLSGVKAIAVGGNR 732
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I+ G+ HTL L G V++CG GQ G + + +P V G ++ +S+
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL---NKVSSISAG 233
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+ G V+ WG ++YGQ+ + V Q + +S I+ ++SG S L
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPV--QVQNLSGIIAISSGNSHSLALK 291
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
D+G V++WG G LG G S+ IPS Q S + S+ G A+
Sbjct: 292 DDGTVWAWGDNESGQLGDGTTNSK-----YIPS------QVQGLSGIVSISCGFYYSMAL 340
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
N G +++WG N GQLG GT D+ + V+
Sbjct: 341 KNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVS 372
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 34/262 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIM 128
I ++ G +HT+ + + + G N +GQ G + ++ +EG K+
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTID--------INSPIPVEGLNKVS 228
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G+ +++ L G V++ G GQ G G + +P V+ + G I+ +SS
Sbjct: 229 SISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQ-NLSG--IIAISSGNS 285
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
LA+ D G V+ WG++E GQ+ + + + SQ +G+S IV ++ G L ++
Sbjct: 286 HSLALKDDGTVWAWGDNESGQLGDGTTN--SKYIPSQVQGLSGIVSISCGFYYSMALKND 343
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---A 302
G V+ WG G LG G R+ P S ++ +IA C A
Sbjct: 344 GTVWVWGDNTSGQLGDGTTTDRNTAV--------------PVSGLDGVIAIACGVNHSMA 389
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ N G ++ WG N +GQLG GT
Sbjct: 390 LRNDGTVWTWGFNAFGQLGDGT 411
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 67/300 (22%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK ++ G +H + + ++ + +G+N +GQ G G + ++ + G +
Sbjct: 526 DIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKS-----LPVQVSGISGITAI 580
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK------ 182
A G H+L L G V++ G GQ G G ++ TP V E+ G ++
Sbjct: 581 SA--GGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVS-ELSGITVISNCIYRS 637
Query: 183 --------------------------------LSS--AVDC----VLAVSDKGDVFGWGN 204
LS A++C LA+ + G V+ WG
Sbjct: 638 FALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGK 697
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPK 264
+ +GQ + +T + Q G+S + +A GG+ L +G V+ WG +
Sbjct: 698 NNFGQFGDGTT--TTTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQWG--------R 747
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ S+ P+ + T Q + S++ S+ A+ N G ++ WG N YGQLG GT
Sbjct: 748 ILVSVSPSTVE-TWTTARQVDGLSEIVSI----SNNVALKNDGKVFTWGANDYGQLGDGT 802
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRI 232
+IEG I+K+S LA+ G V+ G ++YGQ+ + + + I++P +G++++
Sbjct: 172 KIEGP-IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPI---PVEGLNKV 227
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+++G L +G V++WG YG LG G +R + P Q S
Sbjct: 228 SSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATR-LSPV----------QVQNLSG 276
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ ++ +G A+ + G ++ WG N+ GQLG GT + P +V
Sbjct: 277 IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQV 321
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I+ CG H L L G V++ G GQ G G P V G + G + + +
Sbjct: 673 IIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSG-LSGVKAIAVGG- 730
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ +A+ G V+ WG +S S + T Q G+S IV +++ L
Sbjct: 731 -NRSIALKSDGTVWQWGRI---LVSVSPSTVETWTTARQVDGLSEIVSISNN----VALK 782
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIP-STLFGQHQFNPKSKVESLIAGPCTFGA 302
++G V++WG YG LG G +R T+ P S L G V + + T
Sbjct: 783 NDGKVFTWGANDYGQLGDGTTTAR---VTVAPVSGLEG---------VAGVASSDTTSMV 830
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+ N G + WGKN +GQLG G
Sbjct: 831 LMNDGTIRAWGKNNFGQLGNG 851
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 117/261 (44%), Gaps = 17/261 (6%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +ACG G + + + +++ G QLG+ D + + V L
Sbjct: 31 LLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQ----------NLVLPRL 80
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V S I +A G AHT+V++ F +G FGQ G G + + +
Sbjct: 81 IVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQ-----VTS 135
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G K+ CG HT +TESG VY+ GWG +GQ G G +Q P V+ ++ G +
Sbjct: 136 LDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVK-KLHGIYVS 194
Query: 182 KLSSAVDCVLAVSD-KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
L+ + + VS+ VF WG EYGQ+ I + + + +A G S
Sbjct: 195 TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDLQQIACGSS 254
Query: 241 ACTMLNDEGLVYSWGYGLLGQ 261
L+ G VY++G+G GQ
Sbjct: 255 YTLALSSRGDVYAFGWGKDGQ 275
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 25/243 (10%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG----QDHTLFLTESGK 145
F++G N+ G G G C IA L+G ++ CG + H+ +TE G+
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSP----CPIIA-LQGLLVVSVACGGGSEEQHSAAVTEQGQ 55
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+ G G GQ G G N P L+ G ++ IV+++ + VS G VF WG
Sbjct: 56 VYTWGSGKSGQLGHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVSKAGLVFAWGWG 114
Query: 206 EYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQ 261
+GQ+ S P ++ GV ++ VA G + ++ + G VY+WG+G+ LG
Sbjct: 115 HFGQLGVGSTHNSNDPVQVTSLDGV-KVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH-LYMWGKNQYGQL 320
G S+S +P + L G + V +L G ++ ++ WG ++YGQL
Sbjct: 174 GDDASQS-RPMYVKK-LHGIY-------VSTLACGLAHTVVVSEVDRAVFSWGWDEYGQL 224
Query: 321 GLG 323
G G
Sbjct: 225 GHG 227
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS----SAVDCVLAVSDKGDVFGW 202
+S G+ DG GLG + +PC + ++G +V ++ S AV+++G V+ W
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPII-ALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59
Query: 203 GNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G+ + GQ+ + Q + PR++ + + IV+VA G + +++ GLV++WG+G GQ
Sbjct: 60 GSGKSGQLGHGDSQNLVLPRLIVGLQS-NPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118
Query: 262 -GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G + + + ++L G KV + G +T GH+Y WG GQL
Sbjct: 119 LGVGSTHNSNDPVQVTSLDG-------VKVCKVACGSAHTAVVTESGHVYTWGWGVNGQL 171
Query: 321 GLGTVEDQPFPLKV 334
G G Q P+ V
Sbjct: 172 GHGDDASQSRPMYV 185
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 20/158 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ +ACG T V T+S ++ +G G+N QLG+ D + P+ +V+
Sbjct: 139 VKVCKVACGSAHTAVVTESG--HVYTWGWGVNG--QLGHGDDASQSRPM-----YVK--- 186
Query: 62 PVKHPSTQIKHLATGRAHTIVITD-NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + LA G AHT+V+++ + F++G + +GQ G G + + G N +
Sbjct: 187 --KLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHG--GWDIFGGN---KNRS 239
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
+ + CG +TL L+ G VY+ GWG DGQ G
Sbjct: 240 PRPIKDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
Length = 637
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 23/265 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI +++ + P ++ K +S I S G + + +V
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI----SCGYYHSAFVTKKVV 248
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y++G +G LG G + + +P +I K+ + G +T+ G
Sbjct: 249 YAFGLGQFGQLGLGTFLFETSEPKIIDRI--------KDQKISHISCGENHTALMTDIGL 300
Query: 309 LYMWGKNQYGQLGLG--TVEDQPFP 331
+Y +G ++G+LGLG +Q FP
Sbjct: 301 MYTFGDGRHGKLGLGMENFTNQFFP 325
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 27/258 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D H I
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT-----FHQIGFFTPSD 178
Query: 127 IMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I+ + G + + LTE GK++ G ++GQ G L N+ C+ G+ I +S
Sbjct: 179 IIKQLSAGANTSAALTEDGKLFMWGDNSEGQIG---LKNKSNVCIPHEVTVGKPISWISC 235
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQCKGVSRIVDVASGGSACT 243
V+ K V+ +G ++GQ+ + S P+++ + K +I ++ G +
Sbjct: 236 GYYHSAFVTKKV-VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKD-QKISHISCGENHTA 293
Query: 244 MLNDEGLVYSWGYGLLGQ 261
++ D GL+Y++G G G+
Sbjct: 294 LMTDIGLMYTFGDGRHGK 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 45/278 (16%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGA-FTFGNNSFGQCGRGIVQEEDYQGK-WF 115
R+ V QI A G A + + GA FTFG F E+ K WF
Sbjct: 20 RVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKTKFA---------ENIPSKFWF 70
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+++ + CG +HT +T + K+Y G GQ GLG + P ++ +
Sbjct: 71 KNDVP-------ICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKA-L 122
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-------SESEMQIS--TPRVLSQC 226
+ E++ + + L +D G V+ G + GQ+ ++ QI TP +
Sbjct: 123 KPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDI--- 179
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
I +++G + L ++G ++ WG GQ ++S IP H+
Sbjct: 180 -----IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSN--VCIP------HEVTV 226
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ S I+ A +Y +G Q+GQLGLGT
Sbjct: 227 GKPI-SWISCGYYHSAFVTKKVVYAFGLGQFGQLGLGT 263
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R T F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD--------TFHQIGFFTPSDIIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVG 227
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 30 ACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGK--------- 80
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G H ++ T++ + +G+N + Q G G QG +L +K
Sbjct: 81 -KISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN----QGVTPVQVCTNLLLKK 135
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L+ G +Y+ G+ GQ G G NQ TP V ++ + +V ++
Sbjct: 136 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACG 195
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV + G+V+GWG + GQ + + Q+ TP ++ GV I+ +A G +
Sbjct: 196 QTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHGVC-ILQIACGYAHTLA 253
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K S + P I K +V + A T
Sbjct: 254 LTDEGLLYAWGANTYGQLGTGNK-SNQLSPLQI---------MMEKERVVEIAACHSAHT 303
Query: 300 FGAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 304 SAAKTQSGQVYMWGQ 318
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I T N+ F FG N G G D Q + L G+KI G
Sbjct: 35 TSANEAIYTTHNDEVFVFGLNCSNCLGTG-----DSQSTIVPKKLEALCGKKISSLSYGS 89
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G+VY+ G Q G G N TP V + +++++++ +A+
Sbjct: 90 GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL 149
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S GD++ WG + GQ+ S S TPR +S C +V +A G ++ + + G VY
Sbjct: 150 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVY 209
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H + + G A+T+ G L
Sbjct: 210 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHGVC----ILQIACGYAHTLALTDEGLL 260
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q PL++ + ++
Sbjct: 261 YAWGANTYGQLGTGNKSNQLSPLQIMMEKER 291
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 19/268 (7%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DH 136
+ I +TD++ F FG N G G D Q + L G++I G H
Sbjct: 32 SEAIYVTDSDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKRIKSLSYGSGPH 86
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
L TE G VY+ G Q G G N P V + +++V+++ +A++
Sbjct: 87 VLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAAD 146
Query: 197 GDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G++F WG + GQ+ S S TPR ++ C ++V++A G ++ + D G VY WG
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWG 206
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y G LG G ++ L P + H V ++ G A+T+ G LY W
Sbjct: 207 YNGNGQLGLGNNGNQ-----LTPVRVAALHGVC----VNQIVCGYAHTLALTDEGLLYAW 257
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G N YGQLG G+ + P ++ V ++
Sbjct: 258 GANTYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -RIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLVKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP V + +++V ++
Sbjct: 130 VVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q+ TP ++ GV + + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGVC-VNQIVCGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 297
Query: 301 -GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 40/311 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N+ QLG + +P+PV S ++ + G +H++ + +
Sbjct: 157 VWAWGANASGQLGEGTTTNR-----------LVPVPVLGLS-EVVAVEAGSSHSLALRSD 204
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +G N+ GQ G G + + L G M+A G ++L + G V
Sbjct: 205 GTVWAWGANASGQLGDGTTTKR-------LVPVQVLSGVVAMEA--GSGYSLAVRNDGTV 255
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G+ GQ G + ++ TP V G E +V +++ LA+ G V+ WG+++
Sbjct: 256 WAWGYNFSGQLGDDTVTSRSTPVQVLGLSE---VVAVAAGSSLSLALRSDGTVWAWGSND 312
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
YGQ E S Q +G+S V VA+G + + +G V++WG G LG+G
Sbjct: 313 YGQ--RGEGTTSNRAFPVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGT 370
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+RS +P Q S V ++ AG + AI + G ++ WG N GQLG G
Sbjct: 371 TSNRS-EPV----------QVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDG 419
Query: 324 TVEDQPFPLKV 334
T D+ P++V
Sbjct: 420 TTTDRLVPVQV 430
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 28/252 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ GNN GQ G G + L +++ A G H+L L G V++
Sbjct: 8 WAAGNNGSGQLGDGTRDNR-------STPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAW 60
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G+ GQ G G L ++ P V+G G V + + LAV D G V+ WG++ GQ
Sbjct: 61 GYNGYGQLGNGSLGSRAEPVQVQGLSGG---VSVDAGHYHSLAVRDDGTVWAWGDNPNGQ 117
Query: 210 ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKV 265
+ E +T R++ Q +G+S +V V +G S L +G V++WG G LG+G
Sbjct: 118 LGEG---TTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTT 174
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+R L+P + G S+V ++ AG A+ + G ++ WG N GQLG GT
Sbjct: 175 NR-----LVPVPVLG------LSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTT 223
Query: 326 EDQPFPLKVAVG 337
+ P++V G
Sbjct: 224 TKRLVPVQVLSG 235
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 36/265 (13%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAV 131
G H++ + D+ + +G+N GQ G G QG +++
Sbjct: 94 GHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGL-----------SEVVAVT 142
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H+L L G V++ G A GQ G G N+ P V G E +V + + L
Sbjct: 143 AGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVPVLGLSE---VVAVEAGSSHSL 199
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A+ G V+ WG + GQ+ + +T + L + +S +V + +G + ++G V
Sbjct: 200 ALRSDGTVWAWGANASGQLGDG----TTTKRLVPVQVLSGVVAMEAGSGYSLAVRNDGTV 255
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WGY G LG SRS P + G S+V ++ AG A+ + G
Sbjct: 256 WAWGYNFSGQLGDDTVTSRST-----PVQVLG------LSEVVAVAAGSSLSLALRSDGT 304
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLK 333
++ WG N YGQ G GT ++ FP++
Sbjct: 305 VWAWGSNDYGQRGEGTTSNRAFPVQ 329
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 46/314 (14%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N QLG + P++++ +++ A G H++ + ++
Sbjct: 7 VWAAGNNGSGQLGDGTRDNRSTPVQVL------------GLSEVVAAAAGSIHSLALRND 54
Query: 87 EGAFTFGNNSFGQCGRGIV--QEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ +G N +GQ G G + + E Q + L G +DA G H+L + + G
Sbjct: 55 GTVWAWGYNGYGQLGNGSLGSRAEPVQ-------VQGLSGGVSVDA--GHYHSLAVRDDG 105
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G +GQ G G + P V+G E +V +++ LA+ G V+ WG
Sbjct: 106 TVWAWGDNPNGQLGEGTTTRRLVPVQVQGLSE---VVAVTAGSSHSLALRSDGTVWAWGA 162
Query: 205 SEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLG 260
+ GQ+ E +T R++ G+S +V V +G S L +G V++WG G LG
Sbjct: 163 NASGQLGEG---TTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLG 219
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G R L+P + S V ++ AG A+ N G ++ WG N GQL
Sbjct: 220 DGTTTKR-----LVPVQVL--------SGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQL 266
Query: 321 GLGTVEDQPFPLKV 334
G TV + P++V
Sbjct: 267 GDDTVTSRSTPVQV 280
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G V++ G GQ G G +N+ TP V G E +V ++ LA+ + G V+ WG
Sbjct: 5 GTVWAAGNNGSGQLGDGTRDNRSTPVQVLGLSE---VVAAAAGSIHSLALRNDGTVWAWG 61
Query: 204 NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ YGQ+ + V Q +G+S V V +G + D+G V++WG G LG
Sbjct: 62 YNGYGQLGNGSLGSRAEPV--QVQGLSGGVSVDAGHYHSLAVRDDGTVWAWGDNPNGQLG 119
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+G R L+P Q S+V ++ AG A+ + G ++ WG N GQL
Sbjct: 120 EGTTTRR-----LVPV------QVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQL 168
Query: 321 GLGTVEDQPFPLKV 334
G GT ++ P+ V
Sbjct: 169 GEGTTTNRLVPVPV 182
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 35/259 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++G G N QLG FV +P+ V S + +A G H++ + +
Sbjct: 455 VWGWGYNGYGQLG-----------TFTSLFVLVPVQVTGLSGVVA-VAAGNLHSLAVRSD 502
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ G N GQ G G + + + L G ++ G H+L + G V
Sbjct: 503 GTVWALGRNDNGQLGDG-----SWTNRSAPVQVTGLSG--VVSVAAGDSHSLAVRYDGSV 555
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G+ + GQ G G + P V G + G V SS D +AV G V+ WG +
Sbjct: 556 WAWGYNSFGQLGDGSWFQRSAPVQVTG-LSGRGSVAASS--DYSMAVRYDGTVWAWGFNL 612
Query: 207 YGQISE---SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLG 260
YGQ+ + S Q+ P + Q +GV V V G S L +G V++WGY G LG
Sbjct: 613 YGQLGDGTTSSNQL-VPVQVQQLRGV---VAVEVGSSHSLALRSDGTVWTWGYNSFGQLG 668
Query: 261 QGPKVSRSMKPTLIPSTLF 279
GP + T I S L+
Sbjct: 669 NGPPL---YATTAIRSLLY 684
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 42/276 (15%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH- 117
+P+ V+ S + +A G + ++ + ++ + +G N +GQ G F
Sbjct: 426 VPVQVQGLSGVVAVVA-GTSFSLAVRNDGTVWGWGYNGYGQLGT------------FTSL 472
Query: 118 ------NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ L G ++ G H+L + G V++ G +GQ G G N+ P V
Sbjct: 473 FVLVPVQVTGLSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQV 530
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVS 230
G + G +V +++ LAV G V+ WG + +GQ+ + S Q S P Q G+S
Sbjct: 531 TG-LSG--VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAP---VQVTGLS 584
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
VA+ + +G V++WG YG LG G S + P + Q
Sbjct: 585 GRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQV-------QQLRGV 637
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
VE G A+ + G ++ WG N +GQLG G
Sbjct: 638 VAVE---VGSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 143/333 (42%), Gaps = 45/333 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+A GY ++ A +S ++ G N+ QLG + P+++
Sbjct: 339 VAAGYAHSL-AVRSDGT---VWAWGSNASGQLGEGTTSNRSEPVQV------------QG 382
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ + ++ G + ++ I + + +G+N+ GQ G G + + + L G
Sbjct: 383 LSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTD-----RLVPVQVQGLSG-- 435
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSS 185
++ V G +L + G V+ GWG +G LG + LV ++ G +V +++
Sbjct: 436 VVAVVAGTSFSLAVRNDGTVW--GWGYNGYGQLGTFTS--LFVLVPVQVTGLSGVVAVAA 491
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LAV G V+ G ++ GQ+ + + V Q G+S +V VA+G S +
Sbjct: 492 GNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPV--QVTGLSGVVSVAAGDSHSLAV 549
Query: 246 NDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G V++WGY G LG G RS P Q S S+ A A
Sbjct: 550 RYDGSVWAWGYNSFGQLGDGSWFQRS-APV----------QVTGLSGRGSVAASSDYSMA 598
Query: 303 ITNFGHLYMWGKNQYGQLGLGTV-EDQPFPLKV 334
+ G ++ WG N YGQLG GT +Q P++V
Sbjct: 599 VRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQV 631
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N+ + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI ++ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGEL 211
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQF-NPKSKV-ESLIAGPCTFG--AIT 304
Y++G G LG +P+ L H+ P + E ++ C G +
Sbjct: 212 YTFGEPESGKLG-------------LPNQLLCNHRMPQPVPGIPEKVVQVACGGGHTVVL 258
Query: 305 NFGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 259 TEKAVYTFGLGQFGQLGLGT 278
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 36/324 (11%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T +K KL+ G N+ QLG P + V+ P K
Sbjct: 38 TVLSCGDEHTAVVTGNK----KLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G +E + H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNT-----FHLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL + N C+ + G+ I +
Sbjct: 139 QHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNV---CVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSAC 242
S V+ +G+++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPEKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L E VY++G +G LG G + + P +I + K+ S+ G
Sbjct: 256 VVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKVI--------EHVKDQKISSISCGENH 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G +YG+LGLG
Sbjct: 307 TALITDIGLMYTFGDGRYGKLGLG 330
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T + L+ G +LG P +L+ + R+P PV
Sbjct: 192 ISWISCGYYHSAFVTTEGE----LYTFGEPESGKLGL--------PNQLLCNH-RMPQPV 238
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + +TFG FGQ G G E K H ++
Sbjct: 239 PGIPEKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKVIEH----VK 293
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
+KI CG++HT +T+ G +Y+ G G G+ GLG + NQ P L
Sbjct: 294 DQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTL 342
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK--PEKVKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G R+ T F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERN--------TFHLISFFTSQHKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVG 189
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP-- 60
KI ++ G + T+ + LF G NS+ Q+G D ++ V +P
Sbjct: 141 KIKQLSAGSNTSAALTEDGE----LFMWGDNSEGQIGLKD-----------VTNVCVPQQ 185
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HNI 119
+ V P I ++ G H+ +T +TFG G+ G + C H +
Sbjct: 186 VTVGKP---ISWISCGYYHSAFVTTEGELYTFGEPESGKLG--------LPNQLLCNHRM 234
Query: 120 AD-LEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ G EK++ CG HT+ LTE VY+ G G GQ GLG + + V ++
Sbjct: 235 PQPVPGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVK 293
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
++I +S + ++D G ++ +G+ YG++
Sbjct: 294 DQKISSISCGENHTALITDIGLMYTFGDGRYGKL 327
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI E+ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGQL 211
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFGA 302
Y++G G LG +P+ L H+ P V+ G T
Sbjct: 212 YTFGEPECGKLG-------------LPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT--V 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGT 278
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 142/321 (44%), Gaps = 30/321 (9%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T N KL+ G N+ QLG P + V+ P K
Sbjct: 38 TFLSCGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G +E H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST-----FHLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV---CVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSAC 242
S V+ +G ++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+L ++ VY++G G GQ + + T +P + + K+ + G
Sbjct: 256 VVLTEKA-VYTFGLGQFGQ-LGLGTFLFETSVPKAI----EHIKDQKISFIACGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLG 330
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I+ I+CGY + T + L FG CG K G P +L+++ R+P
Sbjct: 192 ISWISCGYYHSAFVTT--EGQLYTFGEPECG-------------KLGLPNQLLVNH-RMP 235
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV ++ +A G HT+V+T+ + +TFG FGQ G G E K H
Sbjct: 236 QPVPGIPGKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--- 291
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGE 178
++ +KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L +
Sbjct: 292 -IKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFL--R 348
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST 219
IV+L S C V + G E +I++S +T
Sbjct: 349 FIVQLVSCGGCHTLVFATPRLGGTEEMELKEINKSCFSAAT 389
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK--PEKVKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G RS T F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERS--------TFHLISFFTSQRKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 21/138 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG L + +P
Sbjct: 244 KVVQVACGGGHTVVLTEK-----AVYTFGLGQFGQLG----------LGTFLFETSVPKA 288
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++H Q I +A G HT +ITD +TFG+ G+ G G+ + C N
Sbjct: 289 IEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLR 348
Query: 122 LEGEKIMDAV-CGQDHTL 138
I+ V CG HTL
Sbjct: 349 F----IVQLVSCGGCHTL 362
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 30 ACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGK--------- 80
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G H ++ T++ + +G+N + Q G G QG +L +K
Sbjct: 81 -KISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN----QGVTPVQVCTNLLLKK 135
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L+ G +Y+ G+ GQ G G NQ TP V ++ + +V ++
Sbjct: 136 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACG 195
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV + G+V+GWG + GQ + + Q+ TP ++ GV I+ +A G +
Sbjct: 196 QTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHGVC-ILQIACGYAHTLA 253
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K S + P I K +V + A T
Sbjct: 254 LTDEGLLYAWGANTYGQLGTGNK-SNQLSPLQI---------MMEKERVVEIAACHSAHT 303
Query: 300 FGAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 304 SAAKTQSGQVYMWGQ 318
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I T N+ F FG N G G D Q + L G+KI G
Sbjct: 35 TSANEAIYTTHNDEVFVFGLNCSNCLGTG-----DSQSTIVPKKLEALCGKKISSLSYGS 89
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G+VY+ G Q G G N TP V + +++++++ +A+
Sbjct: 90 GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL 149
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S GD++ WG + GQ+ S S TPR +S C +V +A G ++ + + G VY
Sbjct: 150 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVY 209
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H + + G A+T+ G L
Sbjct: 210 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHGVC----ILQIACGYAHTLALTDEGLL 260
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q PL++ + ++
Sbjct: 261 YAWGANTYGQLGTGNKSNQLSPLQIMMEKER 291
>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
strain 10D]
Length = 457
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 37/290 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI------------VQEE-DYQGKWFC 116
I+ +A GR HT ++ + F++G G+ G G VQE+ Q
Sbjct: 132 IEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVR 191
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV--RGE 174
++A +I+ CG H++ L+ G VY+CGWGA GQ G G N++ + V R E
Sbjct: 192 RSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDE 251
Query: 175 ----IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--------------SESEMQ 216
+ RI+K++S L ++D G ++G+G++EYGQ+ + +
Sbjct: 252 HGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCV 311
Query: 217 ISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLI 274
S PR+L+ RI +A G L+D+G V WG+G+ GQ G S +M PT
Sbjct: 312 FSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPT-- 369
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
P L ++ +V + G + + +Y+ G +YG LG+G
Sbjct: 370 PQILNTRNSPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLGIGA 419
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 34/236 (14%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLS- 184
++ CG HT L +G +Y+ G G GQ GLG + P VRG + E I +
Sbjct: 64 VLQVACGGSHTAILLRNGALYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNVGR 123
Query: 185 ---------SAVDC----VLAVSDKGDVFGWGNSEYGQI-SESEMQISTP--------RV 222
AV C AVS G +F WG + G++ + +E++ P +V
Sbjct: 124 SSAVALPPIEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKV 183
Query: 223 LSQCKGVSR---------IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
Q V R IV V G L+ G+VY+ G+G GQ S + +P+L
Sbjct: 184 PGQPGNVRRSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSL 243
Query: 274 IPSTLFGQH-QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
+ T +H P ++ + +G +T+ G +Y +G N+YGQLG+ DQ
Sbjct: 244 LAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQ 299
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CGY +V + ++ CG + QLG+ + P L ++F R
Sbjct: 201 QIVAVECGYHHSVALSAIG----VVYTCGWGAYGQLGHGSCNDE--PSLLAVTF-RDEHG 253
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA-- 120
P+ +I +A+G HT+V+TD+ + FG+N +GQ G + +++
Sbjct: 254 NALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFS 313
Query: 121 --------DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH----------L 162
L G +I CG+ H++ L++ G+V G G GQ GLG L
Sbjct: 314 EPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQIL 373
Query: 163 NNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
N + +P R R+ ++ + L + +++ G+ EYG +
Sbjct: 374 NTRNSPLASR------RVTGIACGHENTLFLVSDNEIYVTGSGEYGLL 415
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
+GD+F Q SE +I R++S + + ++ VA GGS +L G +Y+ G
Sbjct: 37 EGDIF--------QPSELP-KIVLDRLVSDRRTPNHVLQVACGGSHTAILLRNGALYTVG 87
Query: 256 YGLLGQ---GPKVSRSMKPTLIPSTL-------FGQHQFNPKSKVESLIAGPCTFGAITN 305
+GL GQ G ++ R PT + L G+ +E++ G A+++
Sbjct: 88 HGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNVGRSSAVALPPIEAVACGRYHTFAVSS 147
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G L+ WG + G+LG GT P V+ +K
Sbjct: 148 DGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEK 182
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 27/272 (9%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW-FCHNI----ADLE 123
IK A G H + +T+ +++G+NS+ + G G QG NI A L
Sbjct: 78 IKTFACGSGPHVLALTEKGEVYSWGHNSYCELGNGTCN----QGLTPILVNIPTLGAGLN 133
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ I+D CG H+L LTE G+VY+ G GQ G NQ +P V + G++IV +
Sbjct: 134 MKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHI 193
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + V+D G+V+GWG + GQ I Q++ RV S V I+ VA G +
Sbjct: 194 SCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVV--IIKVACGYAH 251
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+DEG +Y WG YG LG G K + + P L+ H+ S + +L
Sbjct: 252 TLALSDEGKLYVWGGNSYGQLGIGNK-TNACNPVLVT------HEMGRISDIAALHYNHI 304
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
+ A+ G +YMWG N GQ + T PF
Sbjct: 305 S-TAVGVGGRVYMWG-NCRGQ-SISTPTPTPF 333
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 124/267 (46%), Gaps = 30/267 (11%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+++ ++ + GNN G G Y K I L + I CG H L
Sbjct: 37 LLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKK-----IEVLCDKDIKTFACGSGPHVLA 91
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-----ERIVKLSSAVDCVLAVS 194
LTE G+VYS G + + G G N TP LV G + IV ++ LA++
Sbjct: 92 LTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALT 151
Query: 195 DKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
++G+V+ WG + GQ+ S +PR ++ +IV ++ G ++ ++ D G VY
Sbjct: 152 EEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVYG 211
Query: 254 WGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFG 307
WGY G LG G V++ M P+ + S L G +I C + A+++ G
Sbjct: 212 WGYNGVGQLGIGNYVNQ-MTPSRVGS-LIGV----------VIIKVACGYAHTLALSDEG 259
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
LY+WG N YGQLG+G + P+ V
Sbjct: 260 KLYVWGGNSYGQLGIGNKTNACNPVLV 286
>gi|440796515|gb|ELR17624.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 389
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 152/356 (42%), Gaps = 66/356 (18%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQL-GYH----DPRKKGNPLELVMSFV 57
++ D+ CG+ F A +K ++G G+N QL G H D + NP+
Sbjct: 52 QVVDLGCGH-FHAFARTAKGN---VYGWGMNEHHQLFGEHNDNVDTPRLLNPM------- 100
Query: 58 RIPLPVKHPSTQIKHLA-TGRAHTIVIT--DNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
+P P Q+K +A +G +++ D +T+G++
Sbjct: 101 -LPFLAHEPPPQVKKMAGSGVTSALLVAHHDRTELWTWGSSI------------------ 141
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+ LEGE+I+D G H L LT S K++ GWG +GQ GLG+ +NQ P V
Sbjct: 142 ---KVVGLEGEEIIDFGLGWGHGLALTASKKLFVWGWGKNGQLGLGNYDNQPVPAQVTA- 197
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG-QISE------------SEMQISTPR 221
+ G I L+ DC VS++G V+ WG +EY QI + + I+ P
Sbjct: 198 LSGVPIRSLAVGPDCSAVVSEEGQVYFWGRNEYWMQIKVAWTKGGETMGECAPIHIAFPD 257
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTL 278
+ + S + V G +++EG ++WG G LG G K +P P
Sbjct: 258 KAPRMRQAS-LRQVRCGYGHLVAVDEEGQAWAWGLNKNGQLGLGDK-EEHQEPR--PVAF 313
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
F + KV + G +T+ G L+ G YG+LG G EDQ P V
Sbjct: 314 FREENL----KVAYVSCGRVHTVFLTDDGRLWTCGSGVYGRLGHGDKEDQIVPTLV 365
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 108/298 (36%), Gaps = 58/298 (19%)
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLTESGKVYSCGW 151
G GQ G V + +F + EG E+++D CG H T G VY GW
Sbjct: 18 GWGHHGQLGIAGVPLSHTKSGYFPAPVQMPEGDEQVVDLGCGHFHAFARTAKGNVY--GW 75
Query: 152 GADGQTGL--GHLNNQETPCLV---------------------------------RGEI- 175
G + L H +N +TP L+ R E+
Sbjct: 76 GMNEHHQLFGEHNDNVDTPRLLNPMLPFLAHEPPPQVKKMAGSGVTSALLVAHHDRTELW 135
Query: 176 -----------EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVL 223
EGE I+ LA++ +F WG + GQ+ P +
Sbjct: 136 TWGSSIKVVGLEGEEIIDFGLGWGHGLALTASKKLFVWGWGKNGQLGLGNYDNQPVPAQV 195
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
+ GV I +A G ++++EG VY WG KV+ + +
Sbjct: 196 TALSGVP-IRSLAVGPDCSAVVSEEGQVYFWGRNEYWMQIKVAWTKGGETMGECAPIHIA 254
Query: 284 F---NPKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
F P+ + SL C +G A+ G + WG N+ GQLGLG E+ P VA
Sbjct: 255 FPDKAPRMRQASLRQVRCGYGHLVAVDEEGQAWAWGLNKNGQLGLGDKEEHQEPRPVA 312
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 22/244 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I D G+G + T SK KLF G + QLG + + P + V + +P
Sbjct: 150 EIIDFGLGWGHGLALTASK----KLFVWGWGKNGQLGLGNYDNQPVPAQ-VTALSGVP-- 202
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG-QCGRGIVQEEDYQGKWFCHNIA- 120
I+ LA G + V+++ + +G N + Q + + G+ +IA
Sbjct: 203 -------IRSLAVGPDCSAVVSEEGQVYFWGRNEYWMQIKVAWTKGGETMGECAPIHIAF 255
Query: 121 -----DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-E 174
+ + CG H + + E G+ ++ G +GQ GLG + P V
Sbjct: 256 PDKAPRMRQASLRQVRCGYGHLVAVDEEGQAWAWGLNKNGQLGLGDKEEHQEPRPVAFFR 315
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
E ++ +S + ++D G ++ G+ YG++ + + L + SR+
Sbjct: 316 EENLKVAYVSCGRVHTVFLTDDGRLWTCGSGVYGRLGHGDKEDQIVPTLVESLADSRVTQ 375
Query: 235 VASG 238
V G
Sbjct: 376 VECG 379
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 35/335 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG T + ++ +++ G +LG+ GN +L+ P P
Sbjct: 61 EIVSVTCGADHTTAYSVAR---TEVYSWGWGDFGRLGH------GNSSDLLT-----PKP 106
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +I+ +A G +H + +T ++G N GQ G G ++ K I
Sbjct: 107 IKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQK-----IQA 161
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG I G +HT +TE G+++ GWG G GLG N++ P V ++G+++V
Sbjct: 162 FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVS-SVDGDKMV 220
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
++ ++VS G ++ +G S+YGQ+ + + P L +G I ++ G
Sbjct: 221 MVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRG-DNISQISGGWR 279
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G +Y WG +G +G G + P I +F KV + G
Sbjct: 280 HTMALTTDGKLYGWGWNKFGQVGAGDNIDH-CSPIQI--------KFPQDQKVIQISCGW 330
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
A+T+ +++ WG+ GQLG G D+ P+
Sbjct: 331 RHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 365
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ P ++ ++ G +H++ + ++G GQ G G D + + ++
Sbjct: 1 MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHG-----DAEDRLSPTQLS 55
Query: 121 DLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L+G +I+ CG DHT + +VYS GWG G+ G G+ ++ TP ++ + G +
Sbjct: 56 ALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKA-LHGLK 114
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG 238
I +++ LAV+ +G+V WG ++ GQ+ + S P+ + +G+S I VA+G
Sbjct: 115 IRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGIS-IKMVAAG 173
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+ ++G ++ WG YG LG G + R + P + S K+ +
Sbjct: 174 AEHTAAVTEDGELFGWGWGRYGNLGLGDRNDR-LVPQKVSSV--------DGDKMVMVAC 224
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++++ G LY +G ++YGQLG G ED+ P ++
Sbjct: 225 GWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRL 263
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 134/312 (42%), Gaps = 37/312 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVM----SFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
G D QLG+ D + +P +L V + H + A+++ T+
Sbjct: 33 GRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTT----------AYSVARTE- 81
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+++G FG+ G G + I L G KI CG H L +T G+V
Sbjct: 82 --VYSWGWGDFGRLGHG-----NSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEV 134
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
S G +GQ GLG + P ++ EG I +++ + AV++ G++FGWG
Sbjct: 135 QSWGRNQNGQLGLGTTEDSLVPQKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGR 193
Query: 207 YGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
YG + + P+ +S G ++V VA G ++ G +Y++G YG LG G
Sbjct: 194 YGNLGLGDRNDRLVPQKVSSVDG-DKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG 252
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
R L+P L N + + G A+T G LY WG N++GQ+G
Sbjct: 253 DFEDR-----LVPHRLEALRGDN----ISQISGGWRHTMALTTDGKLYGWGWNKFGQVGA 303
Query: 323 GTVEDQPFPLKV 334
G D P+++
Sbjct: 304 GDNIDHCSPIQI 315
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I +A G T T+ + LFG G LG D + P ++
Sbjct: 165 ISIKMVAAGAEHTAAVTEDGE----LFGWGWGRYGNLGLGDRNDRLVPQKVSSV------ 214
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G HTI ++ G +T+G + +GQ G G D++ + H +
Sbjct: 215 ----DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG-----DFEDRLVPHRLEA 265
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G+ I G HT+ LT GK+Y GW GQ G G + +P ++ + ++++
Sbjct: 266 LRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFP-QDQKVI 324
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVL 223
++S LAV+DK +VF WG GQ+ E + +TP +L
Sbjct: 325 QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 367
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G ++ +P + ++G IV ++
Sbjct: 8 RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSA-LDGHEIVSVT 66
Query: 185 SAVDCVLAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D A S + +V+ WG ++G++ + + TP+ + G+ +I +A G S C
Sbjct: 67 CGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHC 125
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + + +L+P + Q ++ + AG
Sbjct: 126 LAVTMEGEVQSWGRNQNGQLGLG-----TTEDSLVPQKI----QAFEGISIKMVAAGAEH 176
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+T G L+ WG +YG LGLG D+ P KV+
Sbjct: 177 TAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVS 212
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+VY+ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV D G+V+GWG + GQ + + Q++ RV S C ++ + G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC-----VLQIVCGYAH 244
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--G 296
L DEGL+Y+WG YG LG G K S + P I K +V + A
Sbjct: 245 TLALTDEGLLYAWGANTYGQLGTGNK-SNLLSPAQI---------MVEKERVVEIAACHS 294
Query: 297 PCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 295 AHTSAAKTQGGHVYMWGQ 312
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +T ++ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTHSDEVFVFGLNCSNCLGTG-----DNQSTIVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+V+ WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHSVC----VLQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGNKSNLLSPAQIMVEKER 285
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 40/231 (17%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH----LNNQETPCLVRGEIEG 177
+ ++I A CG HTL LT GK+YSCG GQ LGH L N+ L +E
Sbjct: 344 MHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQ--LGHDVESLPNKRPQLLT--ALEN 399
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVD 234
I + LA+++ G V+ WG++ GQ+ +++ QI PR++ ++V
Sbjct: 400 YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQI-IPRLIRSI-AAKQVVQ 457
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G C L + G +Y+WG YG LG G + PTL V+
Sbjct: 458 IAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTL----------------VQ 501
Query: 292 SLIAGPCTF--------GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
SL P F A++ G ++ WGKN +GQLGL + + FP ++
Sbjct: 502 SLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQL 552
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 42/333 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVR 58
+I ACG T++ T K++ CG N QLG HD P K+ L + +++
Sbjct: 348 EIARAACGASHTLLLTNDG----KMYSCGNNDHGQLG-HDVESLPNKRPQLLTALENYI- 401
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
I G AH++ +T+ +++G+N+ GQ G QE D +
Sbjct: 402 -----------ITQACCGTAHSLALTNWGQVYSWGSNAVGQLG----QETDTTRQIIPRL 446
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEG 177
I + ++++ G H L LT SG++Y+ G A GQ GLG N + TP LV+ + G
Sbjct: 447 IRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQS-LAG 505
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVA 236
I ++ + AVS G +FGWG + +GQ+ +++ P L + + + V+
Sbjct: 506 VPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVS 564
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G L G V++ G +G LG G S ++P +F SK+ +
Sbjct: 565 CGDDFSVFLTAGGGVFTCGAGTFGQLGHG-----SCNNEILPRMVFELM----GSKITQI 615
Query: 294 IAG-PCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
G T + + G +Y +G + GQLG+G V
Sbjct: 616 ACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIV 648
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I IACG + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 506 VPIAFIACGGNHSFAVSKSG----AIFGWGKNTFGQLGLNDLNSRQFPTQL--RTLR--- 556
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +++++ G ++ +T G FT G +FGQ G G E F +
Sbjct: 557 -----SLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVF-----E 606
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G KI CG+ HTL F+ GK+Y G GQ G+G + N TP +VRG
Sbjct: 607 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRG 659
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 130/316 (41%), Gaps = 55/316 (17%)
Query: 60 PLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P PV+ ++ +A G +H + I + + +G N +GQ G G +
Sbjct: 77 PAPVQVQDLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRN--------T 128
Query: 119 IADLEG-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+EG I+ A DH+L L G V++ G GQ G G ++ TP V+G
Sbjct: 129 PVQVEGLRSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGL--- 185
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+ +V +SS LAV G V+ WG +EYGQ+ S Q S P Q +G+ + VA
Sbjct: 186 DSVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAP---VQVQGLHSVTAVA 242
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF----------------- 279
SG + +G V+SWG L GQ S + T + F
Sbjct: 243 SGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFSSAVDVDAGFGHSLALK 302
Query: 280 --------GQHQFN-------------PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
G +QFN V + AG A+ N G ++ WGKN G
Sbjct: 303 SDGTVWAWGNYQFNEWGFGSSTPVQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNG 362
Query: 319 QLGLGTVEDQPFPLKV 334
QLG GT + P+KV
Sbjct: 363 QLGDGTSTARLTPIKV 378
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 33/291 (11%)
Query: 49 PLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE 108
PL+ V + K + I+ A G +HT+ + N + +G GQ G G
Sbjct: 20 PLQAVADESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWGG---GQLGNG----- 71
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
G + DL + + A G H L + G V++ G+ GQ G G + TP
Sbjct: 72 STTGSPAPVQVQDLHSVEAIAA--GGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTP 129
Query: 169 CLVRGEIEGER-IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQC 226
++EG R IV ++ D LA+ G V+ WG +EYGQ+ + S+ TP +
Sbjct: 130 V----QVEGLRSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTP---VRV 182
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
KG+ +V ++SG + +G V++WG YG LG G S P + G H
Sbjct: 183 KGLDSVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSA-----PVQVQGLHS 237
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V ++ +G AI G ++ WG N GQLG G+ D+ P++V
Sbjct: 238 ------VTAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQV 282
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G HT V+T N + FG+N +GQ G G ++ K C + L+ EK AV
Sbjct: 56 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLG---SKNTVHKPTC--VKALKPEKTKLAV 110
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE+G +Y+ G +GQ GLG + T L+ +I +L++
Sbjct: 111 CGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 170
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV++ G +F WG++ GQI ++ +S P + K +S I + G + +G
Sbjct: 171 AVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSI---SCGYYHSAFITGDGE 227
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
+Y++G G+ + +K + +P + G + KV + G +T G +Y
Sbjct: 228 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-----KVNKVACGGEHTVVLTETG-VY 281
Query: 311 MWGKNQYGQLGLGTV 325
+G QYGQLG GT+
Sbjct: 282 TFGLGQYGQLGHGTL 296
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T + L+ G + +LG P +L S R+P PV
Sbjct: 209 ISSISCGYYHSAFITGDGE----LYTFGEPENGKLGLL-------PEQLKNS--RVPQPV 255
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ G +TFG +GQ G G + + K H L
Sbjct: 256 LGIMEKVNKVACGGEHTVVLTET-GVYTFGLGQYGQLGHGTLLFKTSVPKSVKH----LR 310
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
KI + CG+ HT + E+G +++ G G G+ GLG N NQ P L
Sbjct: 311 KCKIRNITCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPAL 359
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
G FTFG ++F E+ K++ N +K + CG +HT +T +GK+Y
Sbjct: 30 GCFTFGKSNFA---------ENIPSKFWFRN------DKPVHISCGDEHTAVVTGNGKLY 74
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G GQ GLG N P V+ ++ E+ + L ++ G+++ G +
Sbjct: 75 MFGSNDWGQLGLGSKNTVHKPTCVKA-LKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGE 133
Query: 208 GQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ + + T ++S +I +A+G + ++G ++ WG GQ
Sbjct: 134 GQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLAD 193
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
++ +P Q + + S+ G IT G LY +G+ + G+LGL
Sbjct: 194 KTY--VSVPC------QVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGL 241
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M K+ +ACG TVV T++ ++ GL QLG+ ++ +P
Sbjct: 259 MEKVNKVACGGEHTVVLTET-----GVYTFGLGQYGQLGHG----------TLLFKTSVP 303
Query: 61 LPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW---FC 116
VKH +I+++ G +HT VI +N FTFG+ G+ G G EE++ ++ C
Sbjct: 304 KSVKHLRKCKIRNITCGESHTAVIAENGLMFTFGDGRHGKLGLG---EENFANQFDPALC 360
Query: 117 HNIADLEGEKIMDAVCGQDHTLFL 140
N ++ CG H L
Sbjct: 361 SNFLSF---TVLLVACGGCHMLVF 381
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 68/306 (22%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
+L+ G HT +IT N + FG+N++GQ G G + + C + L+ EK+ A
Sbjct: 35 YLSCGDEHTALITGNNKLYMFGSNNWGQLGLG---SKSAVYRPIC--VKALKSEKVKLAA 89
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + + L+ +I +LS+ +
Sbjct: 90 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISA 149
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVS-------------------- 230
A+++ G++F WG++ GQI S + PR ++ K +S
Sbjct: 150 ALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYT 209
Query: 231 ------------------------------RIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
+++ VA GG +L E VY++G G G
Sbjct: 210 FGEPECGKLGLPSEQLINHRKPQLVSGISEKVIQVACGGGHTVVLT-EKAVYTFGQGRFG 268
Query: 261 Q---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
Q G + ++ +P ++ + K+ + G IT+ GH+Y +G ++
Sbjct: 269 QLGLGSFIFQAPEPAIL--------EHVKDQKIRHISCGENHTALITDVGHMYTFGDGRH 320
Query: 318 GQLGLG 323
G+LGLG
Sbjct: 321 GKLGLG 326
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 26/172 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I+ I+CGY + T + L FG CG K G P E +++ R P
Sbjct: 188 ISWISCGYYHSAFVTM--EGKLYTFGEPECG-------------KLGLPSEQLINH-RKP 231
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
V S ++ +A G HT+V+T+ + +TFG FGQ G G + + H
Sbjct: 232 QLVSGISEKVIQVACGGGHTVVLTE-KAVYTFGQGRFGQLGLGSFIFQAPEPAILEH--- 287
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
++ +KI CG++HT +T+ G +Y+ G G G+ GLG + NQ P L
Sbjct: 288 -VKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTL 338
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 25/245 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + LF G NS+ Q+G + +S V +P
Sbjct: 137 KIKQLSAGANISAALTEDGE----LFMWGDNSEGQIGLNS-----------ISNVYVPRQ 181
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V I ++ G H+ +T +TFG G+ G Q +++ I+
Sbjct: 182 VT-VGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGIS-- 238
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG HT+ LTE VY+ G G GQ GLG Q + ++ ++I
Sbjct: 239 --EKVIQVACGGGHTVVLTEKA-VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRH 295
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+S + ++D G ++ +G+ +G++ + V + C S+ + VA GG
Sbjct: 296 ISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGG- 354
Query: 241 ACTML 245
C ML
Sbjct: 355 -CHML 358
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+ LS + ++ ++ +G++ +GQ+ S+ + P + K S V +A+ G
Sbjct: 34 IYLSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALK--SEKVKLAACG 91
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ + F + K++ L A
Sbjct: 92 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------SFHLISFFTSRHKIKQLSA 143
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G A+T G L+MWG N GQ+GL ++ + P +V VG
Sbjct: 144 GANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVG 185
>gi|410056351|ref|XP_003954016.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Pan
troglodytes]
Length = 476
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 21/255 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + GL
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTSSGL 210
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TFGAITNFGHL 309
G + PKV+ L +H F+ PC F + +
Sbjct: 211 --ESGNSPISLPPKVTNE---------LVERHSFSRYDGNSVCFHNPCLVFAPFLSENAV 259
Query: 310 YMWGKNQYGQLGLGT 324
Y +G Q+GQLGLGT
Sbjct: 260 YTFGLGQFGQLGLGT 274
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ +S P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+TFG FGQ G G E + K I ++ + I CG++HT +T+ G +Y
Sbjct: 258 AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQTISYISCGENHTALITDIGLMY 313
Query: 148 SCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ G G G+ GLG + N P L + IVKL + C + +
Sbjct: 314 TFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLVACGGCHMVIFAAPHRGVAKEI 371
Query: 206 EYGQISESEMQIST 219
E+ +I+++ + ++T
Sbjct: 372 EFDEINDTCLSVAT 385
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 37/256 (14%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+G GQ G G+ + ++ + N G + + VCG H++FL G VY+CG
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPR----NCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGS 59
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-- 209
+ GQ LGH TP V G ++ ++I +S LAV+++G VF WG E GQ
Sbjct: 60 NSCGQ--LGHNKPGITPEFV-GALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLG 116
Query: 210 ISESEMQISTPRVLSQ-CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-----LGQGP 263
+ +E + PR++ + C RI V G C L+ +G +++WG LG+G
Sbjct: 117 LGTTETAVRIPRLIKRLCD--HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYG 318
PS LF Q P + + T G A++ G ++ WGKN+ G
Sbjct: 175 -----------PSKLFPQ----PLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAG 219
Query: 319 QLGLGTVEDQPFPLKV 334
QLGL ++D+ P +
Sbjct: 220 QLGLNDIQDRAVPCHI 235
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 24/271 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIADLEGEK 126
+K + G H++ + + +T G+NS GQ G GI E + L+ +K
Sbjct: 35 LKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGITPE----------FVGALDTQK 84
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSS 185
I CGQ H+L + E G+V++ G G +GQ GLG P L++ + RI ++
Sbjct: 85 ITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIK-RLCDHRIAQVMC 143
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSACT 243
+A+S G +F WG + GQ+ + + S P+ L G+ + + +GG
Sbjct: 144 GNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIP-LAKITAGGDHSF 202
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
L+ G V+ WG GQ ++ +P + +F KV + G A+
Sbjct: 203 ALSLSGAVFGWGKNKAGQLGL--NDIQDRAVPCHI----KFLRSQKVVHISCGEEHTAAL 256
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T G L+ +G +GQLG G+ ++ P +V
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTANELLPRRV 287
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 43/321 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG NS QLG++ P G E V + + +I ++ G+AH++ + +
Sbjct: 54 VYTCGSNSCGQLGHNKP---GITPEFVGAL---------DTQKITLVSCGQAHSLAVNEQ 101
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F +G GQ G G + + I L +I +CG H + L++ G++
Sbjct: 102 GQVFAWGAGEEGQLGLGTTETAVRIPRL----IKRLCDHRIAQVMCGNQHCIALSKDGQL 157
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G GQ GLG + + G + K+++ D A+S G VFGWG ++
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNK 217
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG- 262
GQ+ +++Q + ++V ++ G L +G ++++G +G LG G
Sbjct: 218 AGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGS 277
Query: 263 ------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
P+ + T + G+H +L P + G +Y +G N
Sbjct: 278 TANELLPRRVLELMGTEVSQITCGRHH--------TLAFAPSS-------GGVYAFGCNS 322
Query: 317 YGQLGLGTV--EDQPFPLKVA 335
+GQLG G + + P+PLK +
Sbjct: 323 HGQLGTGVLSADKSPYPLKTS 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KIT ++CG ++ + ++F G + QLG L + VRIP
Sbjct: 84 KITLVSCGQAHSLAVNEQG----QVFAWGAGEEGQLG----------LGTTETAVRIPRL 129
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +I + G H I ++ + FT+G N+ GQ G G + K F +
Sbjct: 130 IKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLG----KGEPSKLFPQPLKS 185
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G + G DH+ L+ SG V+ G GQ GL + ++ PC ++ + +++V
Sbjct: 186 LAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKF-LRSQKVV 244
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + A++ G +F +G+ +GQ+
Sbjct: 245 HISCGEEHTAALTKDGGLFTFGDGSWGQL 273
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ L G I CG DH L L SGK+ S G G GQ G ++ TP ++ E+
Sbjct: 101 QEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSII-DELA 159
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDV 235
+R+ +++ V A+ + G ++ WG + YGQ+ + + S PR+L + +
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNH-RHVHLM 218
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A G + +L VY+WG YG LG G + ++P + + ++
Sbjct: 219 ACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSV--------RVMSGLDIKQ 270
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
++AG +T+FG +Y WG+ +GQLG G +E + P
Sbjct: 271 IVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIP 309
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 65/356 (18%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ ++ACG F+ + +L+ G N QLG D P L
Sbjct: 162 RVKEVACGVAFSAALMEGG----QLYTWGCNRYGQLGQGDRTSSAIPRML---------- 207
Query: 63 VKHPSTQIKH---LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
PS +H +A G AH +V+T + +T+GNNS+GQ G G ++ Q K ++
Sbjct: 208 ---PSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPK----SV 260
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G I V G++H+ +T G +Y+ G G GQ G G + +++ P L+ +
Sbjct: 261 RVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQ 320
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQIS----------TPRVLSQCKG 228
+ S D ++A++ G V+ WG + +GQ+ +M S +P+++S
Sbjct: 321 ASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAA 380
Query: 229 VSRIVDVASGGSAC------TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLF 279
++ +C + + +++WG +G LG P+ + S +P IP
Sbjct: 381 SEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDT-SFRP--IP---- 433
Query: 280 GQHQFNPKSKVESLIAGPCT------FGAITNFG-----HLYMWGKNQYGQLGLGT 324
Q K K ++A C+ + G ++ WG+ +GQLG G+
Sbjct: 434 ---QEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGS 486
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 23/284 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++K +A G A + + + +T+G N +GQ G+G D + +
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQG-----DRTSSAIPRMLPSMNHRH 214
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSS 185
+ CG H + LT S VY+ G + GQ G G P VR + G I ++ +
Sbjct: 215 VHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVR-VMSGLDIKQIVA 273
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM 244
+ ++ GD++ WG ++GQ+ +M+ P +LS ++ + SG
Sbjct: 274 GENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMA 333
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS--------TLFGQHQFNPKSKVESL 293
+ G VYSWG +G LG G + S K PS + F + + + S+
Sbjct: 334 MTYSGAVYSWGRNCFGQLGHGVDMHYS-KSNRFPSDVISPKIISFFAASEEHDAISLSSI 392
Query: 294 IAGPCTFGAITNFGH-LYMWGKNQYGQLGLGTVED--QPFPLKV 334
G AIT L+ WG+ ++GQLGL + +P P +V
Sbjct: 393 SCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEV 436
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 148/326 (45%), Gaps = 43/326 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K +ACG T + T+S +LF G+N QLG + + P V+ P
Sbjct: 37 KAKSVACGDEHTALVTESG----RLFTFGVNDWGQLGIDEVKVSTRPC-----CVKKLKP 87
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K +K +A GR HTIV T++ +TFG N GQ G + + K C
Sbjct: 88 EK-----VKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVEC------ 136
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E + G DH++ LT+ G++Y G G++GQ GLG ++++ TP L+ + +++
Sbjct: 137 EPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTD---NKVIS 193
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSE---YGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ V+D G+VF +G + GQ ++ ++ +V K S VA GG
Sbjct: 194 VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKS----VACGG 249
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
S +L + G VY++G G LG K P + N K KV + AG
Sbjct: 250 SHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWL----------NFKHKVTQIAAG 299
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGL 322
+T G LY +G ++ +LGL
Sbjct: 300 ENHTALVTEKGQLYTFGDGRHAKLGL 325
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
I ++ FTFG + FG ++ K++ + G+K CG +HT +TE
Sbjct: 9 IPESGAIFTFGKSRFG---------DNLPNKFW------VRGDKAKSVACGDEHTALVTE 53
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
SG++++ G GQ G+ + PC V+ +++ E++ ++ + ++ G ++ +
Sbjct: 54 SGRLFTFGVNDWGQLGIDEVKVSTRPCCVK-KLKPEKVKVVACGRIHTIVATESGCLYTF 112
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
G + GQ+ ++ S V +C+ + +A+G L D+G +Y WG G L
Sbjct: 113 GANGDGQLGVEDIPSSNCPVKVECE-PRQYKALAAGADHSVALTDDGELYVWGGGSEGQL 171
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G + PTL+ + +KV S+ G +T+ G ++ +G+ G+
Sbjct: 172 GLG-DIDDKSTPTLLST----------DNKVISVACGYYHTAFVTDVGEVFTFGEGDGGK 220
Query: 320 LGLGT 324
LG GT
Sbjct: 221 LGQGT 225
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACGY T T + +F G +LG +G ++ ++ +P
Sbjct: 190 KVISVACGYYHTAFVTDVGE----VFTFGEGDGGKLG------QGTDYGKAVAPKKVNIP 239
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIAD 121
K K +A G +HT+V+T+ +TFG GQ G ++ K+F C
Sbjct: 240 EK-----AKSVACGGSHTVVLTECGKVYTFGEGGNGQLG--------HKNKYFYCETPVW 286
Query: 122 LE-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETP 168
L K+ G++HT +TE G++Y+ G G + GL H +NQ P
Sbjct: 287 LNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFP 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
+ G++ ++ + V++ G +F +G +++GQ+ E+++ST + ++
Sbjct: 33 VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
VA G + + G +Y++G GQ + IPS+ + ++L
Sbjct: 93 VACGRIHTIVATESGCLYTFGANGDGQ-------LGVEDIPSSNCPVKVECEPRQYKALA 145
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
AG A+T+ G LY+WG GQLGLG ++D+ P
Sbjct: 146 AGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTP 182
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G H +++ +T+G N FGQ GR DY W + L ++ A CG
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLGR------DYSRLWSLPSELHLPNVFVVSASCGGM 54
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
HTL L++ GKV+S G GA+G+ G G+ N P + +E +RI +++ +A+ D
Sbjct: 55 HTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAIDD 113
Query: 196 KGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGG-SACTMLNDEGLVYS 253
G +F WG G++ + + PR + + + +ASG + + G V++
Sbjct: 114 DGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWT 173
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG +G LG G S ++P L+ S + + + G A+TN G L
Sbjct: 174 WGLGEHGQLGVGSTESH-LEPVLVKS------MADANLHIVEVSCGGAHTAAVTNDGTLL 226
Query: 311 MWGKNQYGQLGLGT 324
WG+ +GQLG G
Sbjct: 227 TWGRGDWGQLGHGN 240
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P + P+ + + G HT++++ F+FG+ + G+ G G +
Sbjct: 35 LPSELHLPNVFVVSASCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYS-----LPQP 89
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV-RGEIEG 177
IA LE ++I G H++ + + GK+++ G G G+ G G++ + P V R
Sbjct: 90 IASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIR 149
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDV 235
+ + S + D + G V+ WG E+GQ + +E + V S IV+V
Sbjct: 150 MKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEV 209
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ GG+ + ++G + +WG G GQ
Sbjct: 210 SCGGAHTAAVTNDGTLLTWGRGDWGQ 235
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +CG T++ +K K+F G ++ +LG+ + R +P
Sbjct: 44 VFVVSASCGGMHTLLLSKEG----KVFSFGDGANGRLGHGNCRN-----------YSLPQ 88
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ S +I +A G H++ I D+ FT+G + G+ G G V D F +
Sbjct: 89 PIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGHGNVL--DVWRPRFVDRLY 146
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-R 179
+ K M A DH+ E+G V++ G G GQ G+G + P LV+ +
Sbjct: 147 RIR-MKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLH 205
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
IV++S AV++ G + WG ++GQ+
Sbjct: 206 IVEVSCGGAHTAAVTNDGTLLTWGRGDWGQL 236
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 133 GQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G H ++ G VY+ WGA+ GQ G + P + + +V S
Sbjct: 1 GPYHAALVSGLGDVYT--WGANFFGQLGRDYSRLWSLPSEL--HLPNVFVVSASCGGMHT 56
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
L +S +G VF +G+ G++ + S P+ ++ + RI +A+G + ++D+G
Sbjct: 57 LLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLES-KRITFIAAGWTHSMAIDDDG 115
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPCTFGAIT- 304
+++WG G LG G V +P + + ++++++A G A+
Sbjct: 116 KLFTWGCGNAGRLGHG-NVLDVWRPRFVDRLY--------RIRMKAMMASGSYDHSAVCC 166
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG ++GQLG+G+ E P+ V
Sbjct: 167 ENGTVWTWGLGEHGQLGVGSTESHLEPVLV 196
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+IT IA G+ + + D + KLF G + +LG+ + P V RI +
Sbjct: 97 RITFIAAGW----THSMAIDDDGKLFTWGCGNAGRLGHGNVLDVWRP-RFVDRLYRIRMK 151
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
S H A V +N +T+G GQ G G E + ++AD
Sbjct: 152 AMMASGSYDHSA-------VCCENGTVWTWGLGEHGQLGVG--STESHLEPVLVKSMADA 202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG 160
I++ CG HT +T G + + G G GQ G G
Sbjct: 203 N-LHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHG 239
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 41/341 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + IACG G TVV T + +F G D +LG+ D K +P
Sbjct: 33 VGVQQIACGSGHTVVLTTDGE----VFTWGRGDDGRLGHGDNGWK-----------YVPR 77
Query: 62 PVKHPSTQIK-HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ + QI + G HT +T N +T+G +G+ G G D G +
Sbjct: 78 MTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHG-----DEAGHATPKRVE 132
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGER 179
L G + CG HT +T SG +Y+ G +G G G +Q P L+ + +R
Sbjct: 133 ALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLE-SMAAKR 191
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ ++S+ V+D G++F WG ++G++ SE +P ++ G + V+ G
Sbjct: 192 VAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVG-KKPRQVSCG 250
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPST--LFGQHQFNPKSKVESL 293
G +++++G +Y++G +G LG +V++ M PT + + +F V +
Sbjct: 251 GFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNK-MTPTFVEALDGMF----------VSQI 299
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A+T G +Y WG +G+LG G P V
Sbjct: 300 TCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
FT+G GQ G G ++D + L G + CG HT+ LT G+V++
Sbjct: 3 FTWGRGEDGQLGLGDTSDQDEP-----TYVDALRGVGVQQIACGSGHTVVLTTDGEVFTW 57
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G G DG+ G G + P + + + G+ +++++ AV+ GD++ WG YG+
Sbjct: 58 GRGDDGRLGHGDNGWKYVPRMTQ-SLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGK 116
Query: 210 ISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ E +TP+ + G + + +A G ++ G +Y+WG G+ G G
Sbjct: 117 LGHGDEAGHATPKRVEALVGAT-VAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETE 175
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
P L+ S +V + A +T+ G L+ WG+ ++G+LG
Sbjct: 176 GHQYLPRLLESM--------AAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG 223
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 13/188 (6%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ G G DGQ GLG ++Q+ P V + G + +++ + ++ G+VF WG
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVD-ALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
+ G++ + ++Q ++ V G + G +Y+WG YG LG G
Sbjct: 61 DDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHG 120
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ + P + + + + V + G +T G LY WG + G G
Sbjct: 121 DEAGHAT-PKRVEALV--------GATVAQIACGSRHTAIVTASGALYTWGDKENGVAGH 171
Query: 323 GTVEDQPF 330
G E +
Sbjct: 172 GETEGHQY 179
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 199 VFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
VF WG E GQ+ + P + +GV + +A G +L +G V++WG G
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVG-VQQIACGSGHTVVLTTDGEVFTWGRG 60
Query: 258 ---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
LG G + + P + S L GQ V + G A+T G LY WG
Sbjct: 61 DDGRLGHGDNGWKYV-PRMTQS-LAGQ-------IVLQVTCGSYHTAAVTGNGDLYTWGG 111
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
YG+LG G P +V
Sbjct: 112 GMYGKLGHGDEAGHATPKRV 131
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G +SFGQ G G I+ E G F H+ + + CG +H++FL E G+V
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYG--FIHD------RNVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH + P + G + G+ IV ++ +A+SD+G VF WG
Sbjct: 56 YTCGLNTKGQ--LGHESEGSKPEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 207 YGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ + ++ ++ PR++ + + I+ ++ G C L +G ++WG YG LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQT-ILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V AG A++ G ++ WGKN GQLG
Sbjct: 172 GKECPSQASPQRVKS-LDGI----PLAQVA---AGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L D+ P V +
Sbjct: 224 LSDERDRESPCHVKL 238
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L G+ I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH---ESEGSKPE----PIGALAGQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG+ H++ L++ G+V+S G G+DGQ GL + + T + ++ + I+++S
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G F WG + YGQ+ E Q S RV S G+ + VA+GG+ L+
Sbjct: 149 CLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIP-LAQVAAGGAHSFALS 206
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V+ WG GQ G R + L Q KV + G +T
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ K P+ +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGHESEGSKPEPIGAL---------- 81
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 82 --AGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + +
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVSQIACGRHHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG D R + +P + +R S ++ +++ G HT V+T +
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCH--VKLLR--------SQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G G GQ G GH N + P V+G
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 144/332 (43%), Gaps = 56/332 (16%)
Query: 36 SQLGYHDPRKKGNPLELV-----MSFVRIPLPVKHPSTQIKH----LATGRAHTIVITDN 86
+ G +D + G P+ + ++ V P P+ P K +A G H+ ++T +
Sbjct: 622 TSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTAD 681
Query: 87 EGAFTFGNNSFGQCGRGIV------------QEEDYQGKWF---CHNIADLEGEKIMDAV 131
+TFG Q G V + Q +F ++ L G+ +
Sbjct: 682 GELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVA 741
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG+ H+ +TE G +Y+ G GA+GQ G G + +Q TP V I+ + +VK++ +
Sbjct: 742 CGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSA 801
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI-----------------STPRVLS--QCKGVSRI 232
AV G ++ G E GQ+ + + I P LS + V +
Sbjct: 802 AVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHV-QF 860
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VD+A G C + + GL+Y+WG G LG GP S +PT + S V
Sbjct: 861 VDIACGHGFCAAITNRGLLYTWGKGTALGLGPSGDVS-EPTHLSSI----------DGVV 909
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
S+ G A+T+ G LYMWG ++ G+LG G
Sbjct: 910 SVACGDIHAAALTDKGQLYMWGSSEAGRLGDG 941
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 130/322 (40%), Gaps = 55/322 (17%)
Query: 60 PLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWF 115
PL ++ S Q+K +A G H++ +T+N +FG N GQCG+ I + D
Sbjct: 591 PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVAR 650
Query: 116 CHNIA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-------------L 159
I DL + ++ G H+ +T G++Y+ G G + Q G L
Sbjct: 651 PRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNAL 710
Query: 160 GHLNN-------QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
+ +N Q P + + G+ + +++ V+++G ++ WG GQ+
Sbjct: 711 HYRSNSAQTSYFQPKPTRLSA-LNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGH 769
Query: 213 SEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK---- 264
+M +TP+ + +V VA G + ++ G++Y+ G G LG+G +
Sbjct: 770 GDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICA 829
Query: 265 -----------VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
+ PT + QF + G AITN G LY WG
Sbjct: 830 THGEGCTGSGWSCQERIPTFLSILSVRHVQFV------DIACGHGFCAAITNRGLLYTWG 883
Query: 314 KNQYGQLGLGTVEDQPFPLKVA 335
K LGLG D P ++
Sbjct: 884 KGT--ALGLGPSGDVSEPTHLS 903
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 42/221 (19%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC-VLAVSDKGDVFGWGNSEYGQ 209
WGA+ LGH E + E VK+ +A + L +++ G+V +G ++ GQ
Sbjct: 572 WGANSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQ 631
Query: 210 -------ISESE--MQISTPR--VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG- 257
I+ES ++ PR VL +V +A+GG ++ +G +Y++G G
Sbjct: 632 CGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGG 691
Query: 258 ----------LLGQGPKV----SRSM-------KPTLIPSTLFGQHQFNPKSKVESLIAG 296
LG+G S S KPT + S L GQ V+ + G
Sbjct: 692 EFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRL-SALNGQ-------VVKQVACG 743
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+T G LY WG+ GQLG G + DQ P +V G
Sbjct: 744 RFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAG 784
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ G++HT+ LT+SG+V+SCG Q LGH + P V G ++ RI K+
Sbjct: 33 ASNVSQVTMGENHTVMLTKSGEVFSCGNNDLDQ--LGHKKQRTKPEKVEG-LDFYRITKI 89
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S + LA ++ G +FGWG+ +GQ+ + P+++ IV ++ G +
Sbjct: 90 SCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQPLPKIIKSL-ATFHIVQISCGKNHSL 148
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L + G +YSWG G LG G + +PTLI S L + + G
Sbjct: 149 ALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLL--------GIPIAFIACGSNHS 200
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A++ G +Y WGKN YGQLGL E++ P ++
Sbjct: 201 FALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQL 234
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 30/262 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
++ + G TV+ TKS + +F CG N QLG+ R K +E + F RI
Sbjct: 36 VSQVTMGENHTVMLTKSGE----VFSCGNNDLDQLGHKKQRTKPEKVE-GLDFYRI---- 86
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-RGIVQEEDYQGKWFCHNIADL 122
++ G HT+ + F +G++S GQ G G Q I L
Sbjct: 87 -------TKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQP-------LPKIIKSL 132
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIV 181
I+ CG++H+L LT +G++YS G DGQ GLG + E P L++ + G I
Sbjct: 133 ATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLL-GIPIA 191
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ + A+S G ++GWG + YGQ +++ E ++ P L + + R+ +A G
Sbjct: 192 FIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH-PTQLKTLRSI-RVKYIACGE 249
Query: 240 SACTMLNDEGLVYSWGYGLLGQ 261
L+ +G V++ G G+ GQ
Sbjct: 250 DFSAFLSADGGVFTCGAGMYGQ 271
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 39/291 (13%)
Query: 58 RIPLPVKHP---STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQEEDYQG 112
+I P++H ++ + + G HT+++T + F+ GNN Q G + + E +G
Sbjct: 21 QIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTKPEKVEG 80
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL-NNQETPCLV 171
L+ +I CG +HTL E G+++ GWG+D LG Q P ++
Sbjct: 81 ---------LDFYRITKISCGGNHTLAFNEWGQLF--GWGSDSHGQLGFNGTTQPLPKII 129
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQC 226
+ + IV++S + LA+++ G+++ WG + GQ+ SE E Q P ++
Sbjct: 130 KS-LATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQ---PTLIKSL 185
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
G+ I +A G + L+ G +Y WG YG LG + ++ + PT + +
Sbjct: 186 LGIP-IAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENK-LHPTQLKTL------ 237
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+V+ + G ++ G ++ G YGQLG G+ ++ P K+
Sbjct: 238 --RSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKI 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG + +KS ++G G N+ QLG +D K +P +L +R
Sbjct: 188 IPIAFIACGSNHSFALSKSG----AIYGWGKNTYGQLGLNDEENKLHPTQL--KTLR--- 238
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S ++K++A G + ++ + G FT G +GQ G G E K I +
Sbjct: 239 -----SIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRK-----IME 288
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL L S G+VYS G G GQ G N TP +V G
Sbjct: 289 LMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRVKTNCSTPQVVLG 341
>gi|157119218|ref|XP_001653306.1| regulator of chromosome condensation [Aedes aegypti]
gi|108875404|gb|EAT39629.1| AAEL008575-PA [Aedes aegypti]
Length = 478
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 40/266 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT + A FG N FGQ G+ ++ + + LE ++ A CG++HT
Sbjct: 119 AHSVLITLDRKALAFGRNQFGQLGQSELRTFEKPTP-----VTGLEEVNVIQAACGRNHT 173
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPC-LVRGEIEGERIVKLSSAVDCVLAVSDK 196
LFL+++G VY+CG GQ G+G N Q T R G I+K++ + + + K
Sbjct: 174 LFLSDTGVVYACGDNKSGQCGVG--NTQPTILKATRLNYAGPPIIKVACGAEFSMILDIK 231
Query: 197 GDVFGWGNSEYGQ----------ISESEM----QISTPRVLSQCKGVS----------RI 232
G+V+ +G EYGQ ++ ++M + S +++ + +I
Sbjct: 232 GNVYSFGLPEYGQLGHNTEGKYFVTSTKMSFHFETSPKKIVLYVEKTKDGHVTPIDDVKI 291
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
VD + G + ++ + +SWG+G +G+ + M P LI F Q KV
Sbjct: 292 VDFSCGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPRLIK---FFDIQ---NRKV 345
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQ 316
+ G AIT+ G LY++G+N+
Sbjct: 346 LRVFCGSSFSLAITDIGALYLFGQNK 371
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 125/303 (41%), Gaps = 57/303 (18%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + ACG T+ + + ++ CG N Q G GN ++ R+
Sbjct: 161 VNVIQAACGRNHTLFLSDTG----VVYACGDNKSGQCGV------GNTQPTILKATRL-- 208
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH---- 117
+ I +A G ++++ ++FG +GQ G + +GK+F
Sbjct: 209 --NYAGPPIIKVACGAEFSMILDIKGNVYSFGLPEYGQLG------HNTEGKYFVTSTKM 260
Query: 118 ---------------------NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
++ ++ KI+D CG +HT+ + + +S G+G G+
Sbjct: 261 SFHFETSPKKIVLYVEKTKDGHVTPIDDVKIVDFSCGNNHTVAIDSKNRAFSWGFGGIGR 320
Query: 157 TGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM 215
G ++ P L++ +I+ +++++ LA++D G ++ +G ++ + E+ M
Sbjct: 321 LGHAEQKDEMVPRLIKFFDIQNRKVLRVFCGSSFSLAITDIGALYLFGQNK--KTGEANM 378
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKP 271
P+ + G + I + ++ + D+ L+ SWG YG LG G + S P
Sbjct: 379 Y---PKPVQDLAGWN-ITSIGVANTSIVISADDSLI-SWGASPTYGELGLGDLIKSSSTP 433
Query: 272 TLI 274
+
Sbjct: 434 KTV 436
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 39/262 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSF------V 57
I +ACG F+++ D ++ GL QLG H+ K MSF
Sbjct: 215 IIKVACGAEFSMIL----DIKGNVYSFGLPEYGQLG-HNTEGKYFVTSTKMSFHFETSPK 269
Query: 58 RIPLPVKHPS---------TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE 108
+I L V+ +I + G HT+ I AF++G G+ G ++E
Sbjct: 270 KIVLYVEKTKDGHVTPIDDVKIVDFSCGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDE 329
Query: 109 DYQG--KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE 166
K+F D++ K++ CG +L +T+ G +Y +G + +TG ++
Sbjct: 330 MVPRLIKFF-----DIQNRKVLRVFCGSSFSLAITDIGALYL--FGQNKKTGEANM---- 378
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS-EYGQISESEM--QISTPRVL 223
P V+ ++ G I + A + + +S + WG S YG++ ++ STP+ +
Sbjct: 379 YPKPVQ-DLAGWNITSIGVA-NTSIVISADDSLISWGASPTYGELGLGDLIKSSSTPKTV 436
Query: 224 SQCKGVSRIVDVASGGSACTML 245
S+C+G+ +I V+ G S +L
Sbjct: 437 SRCEGM-KIPQVSMGYSHTLLL 457
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 29/223 (13%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
C H++ +T K + G GQ G L E P V G +E +++ + + L
Sbjct: 116 CSSAHSVLITLDRKALAFGRNQFGQLGQSELRTFEKPTPVTG-LEEVNVIQAACGRNHTL 174
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+SD G V+ G+++ GQ Q + + I+ VA G +L+ +G V
Sbjct: 175 FLSDTGVVYACGDNKSGQCGVGNTQPTILKATRLNYAGPPIIKVACGAEFSMILDIKGNV 234
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH-QFNPKS------------------- 288
YS+G YG LG + + ST H + +PK
Sbjct: 235 YSFGLPEYGQLGHN-----TEGKYFVTSTKMSFHFETSPKKIVLYVEKTKDGHVTPIDDV 289
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
K+ G AI + + WG G+LG +D+ P
Sbjct: 290 KIVDFSCGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVP 332
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 132/269 (49%), Gaps = 32/269 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 30 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSTVNKPTC--VKALKPEKVKFAAC 84
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + + + L+ +I +LS+ + A
Sbjct: 85 GRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAA 144
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI + + P+ ++ K +S I + G + EG +
Sbjct: 145 LTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGEL 201
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK---VESLIAGPCTFG--AI 303
Y++G G LG +P L H+ P+S E ++ C G +
Sbjct: 202 YTFGEPESGKLG-------------LPKQLLVNHRM-PQSVPGIPEKVVQVACGGGHTVV 247
Query: 304 TNFGHLYMWGKNQYGQLGLGT-VEDQPFP 331
+Y +G Q+GQLGLGT + + P P
Sbjct: 248 LTEKAVYTFGLGQFGQLGLGTFLFETPVP 276
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + V+ P K
Sbjct: 30 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSTVNKP-----TCVKALKPEK-- 78
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G E + H I+ +
Sbjct: 79 ---VKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNS-----FHLISFFTSQR 130
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +S
Sbjct: 131 KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNV---CVPQQVTVGKPISWISC 187
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ +G+++ +G E G++ + + R+ G+ ++V VA GG +
Sbjct: 188 GYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVV 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L ++ VY++G +G LG G + + P +I + K+ S+ G
Sbjct: 248 LTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVI--------EHIKDLKISSIFCGENHTA 298
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 299 LITDLGLMYTFGDGRHGKLGLG 320
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T + L+ G +LG P +L+++ R+P V
Sbjct: 182 ISWISCGYYHSAFVTTEGE----LYTFGEPESGKLGL--------PKQLLVNH-RMPQSV 228
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + +TFG FGQ G G E K H I DL
Sbjct: 229 PGIPEKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETPVPKVIEH-IKDL- 285
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
KI CG++HT +T+ G +Y+ G G G+ GLG + NQ TP L
Sbjct: 286 --KISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTL 332
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ ++ P + K V A+ G
Sbjct: 30 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALK--PEKVKFAACGRN 87
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G R+ + F + K++ L AG
Sbjct: 88 HTLVSTEGGKVYASGGNNEGQLGLGDTDERN--------SFHLISFFTSQRKIKQLSAGS 139
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + + P +V VG
Sbjct: 140 NTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVG 179
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 19/139 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG L + +P
Sbjct: 234 KVVQVACGGGHTVVLTEK-----AVYTFGLGQFGQLG----------LGTFLFETPVPKV 278
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++H +I + G HT +ITD +TFG+ G+ G G+ + C N
Sbjct: 279 IEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLR 338
Query: 122 LEGEKIMDAVCGQDHTLFL 140
+ CG HTL
Sbjct: 339 F---IVQLVACGGCHTLVF 354
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 150/335 (44%), Gaps = 37/335 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG +TVV T K++ CG N QLG+ RK+ L+L++
Sbjct: 67 EIQQIACGENYTVVITHDG----KIYSCGNNDYGQLGHERGRKR---LQLILGL------ 113
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ K +A G HTI + + F++G+NS GQ G + + + L
Sbjct: 114 ---DAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRM----VKTL 166
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
I+ CG H L LT +G++YS G ++GQ GLG + ++ P L+ + G I
Sbjct: 167 GTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLI-NTLAGVPIA 225
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGS 240
++ +A+S G +FGWG + +GQ+ ++ Q + P L + ++I A G
Sbjct: 226 FIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRN-AKICYAACGEE 284
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V++ G YG LG G + + ++ L G S V + G
Sbjct: 285 FSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM--ELMG-------STVTQISCGK 335
Query: 298 -CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T + + G +Y WG GQLG + P P
Sbjct: 336 RHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTP 370
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 22/248 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +GN G+ G G +++E C + + +I CG+++T+ +T GK+YSC
Sbjct: 34 FCWGNTRHGELGLGGIEDEIILVP--CQ-VDFKKASEIQQIACGENYTVVITHDGKIYSC 90
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ LGH ++ L+ G ++ K++ +AV++ G +F WG++ GQ
Sbjct: 91 GNNDYGQ--LGHERGRKRLQLILG-LDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQ 147
Query: 210 I---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
+ S++ M+ S PR++ + G S IV VA G L + G +YSWG G LG G
Sbjct: 148 LGLNSKNFMECS-PRMV-KTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGV 205
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ +KP LI +TL G + + G AI+ G ++ WGKN +GQLGL
Sbjct: 206 DIRSEVKPKLI-NTLAG-------VPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLN 257
Query: 324 TVEDQPFP 331
+++ P
Sbjct: 258 DTQNRNLP 265
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 26/247 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG + T N +L+ G NS+ QLG D R + P +L+ + +P
Sbjct: 171 IVQVACGMKHALALTN----NGELYSWGSNSEGQLGLGVDIRSEVKP-KLINTLAGVP-- 223
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I +A G H+I I+ + F +G N+FGQ G D Q + H + L
Sbjct: 224 -------IAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLN-----DTQNRNLPHQLQTL 271
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
KI A CG++ ++FLT G V++CG G GQ G G NN+ P V E+ G + +
Sbjct: 272 RNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM-ELMGSTVTQ 330
Query: 183 LSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVLS---QCKGVSRIVDVAS 237
+S LA V +G V+ WG GQ+ + S I TP+V+ S ++D+
Sbjct: 331 ISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHGPWVAPNGSSMMDLDK 390
Query: 238 GGSACTM 244
S+CT+
Sbjct: 391 QFSSCTV 397
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+++I+ +A G +T+VIT + ++ GNN +GQ G +G+ I L+
Sbjct: 65 ASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHE-------RGRKRLQLILGLDAFV 117
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSS 185
CG HT+ + E G+++S G ++GQ GL N E +P +V+ + IV+++
Sbjct: 118 FKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVK-TLGTSIIVQVAC 176
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-----ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ LA+++ G+++ WG++ GQ+ SE++ P++++ GV I +A GG
Sbjct: 177 GMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVK---PKLINTLAGVP-IAFIACGGY 232
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
++ G ++ WG +G LG +R++ L Q +K+ G
Sbjct: 233 HSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQL---------QTLRNAKICYAACGE 283
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G+ ++ P +V
Sbjct: 284 EFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQV 320
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 196 KGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
KGD+F WGN+ +G++ E E+ + +V K S I +A G + ++ +G +
Sbjct: 30 KGDMFCWGNTRHGELGLGGIEDEIILVPCQV--DFKKASEIQQIACGENYTVVITHDGKI 87
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YS G YG LG R + + +F + + G A+ +G
Sbjct: 88 YSCGNNDYGQLGHERGRKRLQLILGLDAFVF-----------KKVACGAYHTIAVNEWGQ 136
Query: 309 LYMWGKNQYGQLGLGT 324
L+ WG N GQLGL +
Sbjct: 137 LFSWGSNSEGQLGLNS 152
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 40/338 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CG G V+A D+N L+ G N QL G E + IP V
Sbjct: 462 ISKISCG-GKHVLAI---DENKTLWAWGNNDYLQL----IDDVGLSAESGSNDYCIPFAV 513
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K +K + T+V+ ++E + + + D Q + + I LE
Sbjct: 514 KSEK-DVKDIVAAFNRTLVVYEDEEVWIYAAKN--------TVAGDEQSVYLPYKIEGLE 564
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCG---WGADGQTGLGHLNN-QETPCLVRGEIEGER 179
G + D G++H L L + G VYS G WG G H N+ ET L + +
Sbjct: 565 G--VTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAK-GLTN 621
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
IV +++ + +A+ + G V+ WG++++G+++ S + Q +G+ I +++G
Sbjct: 622 IVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSLEPM--QAEGLENICAISAGN 679
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L ++G V++WG YG LG G S T +P Q + + +IAG
Sbjct: 680 NYNLALKEDGTVWAWGDNTYGQLGNG-----STYKTNVPV------QVDGLENIVKIIAG 728
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ AIT G ++ WGKN GQLG GT +++ P+K+
Sbjct: 729 RDSSFAITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKI 766
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 41/332 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG + +A K K+ ++ G NS QLG + + RIP ++
Sbjct: 114 VACGE-YHTIALK---KDGTVWTWGYNSYGQLGLGEAGE----------IERIPKKIEGL 159
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
IK +A G H++ + + + +G N +GQ G +E + + L G K
Sbjct: 160 EDVIK-VAAGSRHSLALKKDGTVWAWGYNYYGQLG-----DESNIRRNTPVQVKGLTGVK 213
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+DA G ++ L + G V+ G+ GQ G G N P G I ++S+
Sbjct: 214 DIDA--GDFFSVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGV---SNITQISAG 268
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ VLA+ +V+GWG + GQ+ S R+ + + + V +G +
Sbjct: 269 DEHVLALDKDKNVWGWGAGDKGQLGNGTAA-SFLRIPEKLSSFTEVKSVKAGTMVSAAIK 327
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
++G ++ WG YG++G ++ S P Q S ++++ A+
Sbjct: 328 EDGTLWIWGDNTYGIMGNSRNINSS--PV----------QRKDISGIKAVELNQYCAAAL 375
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
N G ++ WGKN G LGLGT D P V+
Sbjct: 376 KNDGTVWTWGKNINGILGLGTALDSQIPSVVS 407
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKL 183
E + CG+ HT+ L + G V++ G+ + GQ GLG E + +IEG E ++K+
Sbjct: 109 EGFVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIER---IPKKIEGLEDVIKV 165
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ LA+ G V+ WG + YGQ+ ES ++ +TP Q KG++ + D+ +G
Sbjct: 166 AAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTP---VQVKGLTGVKDIDAGDFFS 222
Query: 243 TMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L D+G V+ WGY GQ G ++ + +P G S + + AG
Sbjct: 223 VALRDDGTVWGWGYNYKGQIGCGTGINSN-----VPLQTVGV------SNITQISAGDEH 271
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGT 324
A+ +++ WG GQLG GT
Sbjct: 272 VLALDKDKNVWGWGAGDKGQLGNGT 296
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 36/240 (15%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
DK+ ++G G QLG SF+RIP + T++K + G +
Sbjct: 276 DKDKNVWGWGAGDKGQLGNGTAA----------SFLRIPEKLS-SFTEVKSVKAGTMVSA 324
Query: 82 VITDNEGAFTFGNNSFGQCG--RGI----VQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
I ++ + +G+N++G G R I VQ +D G I +E ++ C
Sbjct: 325 AIKEDGTLWIWGDNTYGIMGNSRNINSSPVQRKDISG------IKAVE----LNQYCAA- 373
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
L G V++ G +G GLG + + P +V G + E I S + +
Sbjct: 374 ---ALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGTGDVEVI---SCGKTHMAIIKS 427
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G ++ WG + YGQ+ + T V G+S I ++ GG +++ +++WG
Sbjct: 428 DGTLWTWGYNIYGQLGNGNVDYITEPV--TINGISNISKISCGGKHVLAIDENKTLWAWG 485
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 123/325 (37%), Gaps = 52/325 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ DI G F+V ++G G N Q+G PL+ V
Sbjct: 212 VKDIDAGDFFSVALRDDG----TVWGWGYNYKGQIGCGTGINSNVPLQTV---------- 257
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE-----EDYQGKWFCHN 118
+ I ++ G H + + ++ + +G GQ G G E
Sbjct: 258 --GVSNITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSS---FTE 312
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ ++ ++ A +D TL++ WG + +G+ N + + R +I G
Sbjct: 313 VKSVKAGTMVSAAIKEDGTLWI----------WGDNTYGIMGNSRNINSSPVQRKDISGI 362
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+ V+L+ C A+ + G V+ WG + G + + + P V+S G + ++
Sbjct: 363 KAVELNQY--CAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVS---GTGDVEVISC 417
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G + ++ +G +++WGY + GQ V +P I N S + +
Sbjct: 418 GKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTI----------NGISNISKISC 467
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQL 320
G AI L+ WG N Y QL
Sbjct: 468 GGKHVLAIDENKTLWAWGNNDYLQL 492
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G +SFGQ G G IV E G F H+ + + CG +H++FL E G+V
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYG--FIHD------RNVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + G+ IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHDCEGSKPEQI-GALAGQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 207 YGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ + ++ ++ PR++ + + I+ V+ G C L +G ++WG YG LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQT-ILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V AG A++ G ++ WGKN GQLG
Sbjct: 172 GKECPSQASPQRVKS-LDGI----PLAQVA---AGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L D+ P V +
Sbjct: 224 LSDERDRESPCHVKL 238
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L G+ I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKPEQ-------IGALAGQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG+ H+L L++ G+++S G G+DGQ GL + + T + ++ + I+++S
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G F WG + YGQ+ E Q S RV S G+ + VA+GG+ L+
Sbjct: 149 CLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIP-LAQVAAGGAHSFALS 206
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V+ WG GQ G R + L Q KV + G +T
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG HD +G+ E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLG-HDC--EGSKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 83 ---GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVSQIACGRHHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG D R + +P + +R S ++ +++ G HT V+T +
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCH--VKLLR--------SQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G G GQ G GH N + P V+G
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 41/340 (12%)
Query: 11 YGFTVVATKSKDK-----NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
Y + V S++ + +LF G N LG H P K P PV+
Sbjct: 41 YAVSAVVAGSRNSLAICDDGRLFTWGWNQRGTLG-HPPETKTE---------SSPAPVEA 90
Query: 66 -PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE- 123
+I A G H + + D A+ +G N +GQCG ++ED + +I +
Sbjct: 91 LAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGT-RALRRDIPTPQR 149
Query: 124 ---GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
K+ G H++ LT+ G V++ WG G + TP V+G E++
Sbjct: 150 CALKLKVQQVAAGGTHSVVLTQEGHVWT--WGQPWPP--GDIKQISTPVRVQGL---EKV 202
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGG 239
+ ++ LA+S+ ++ WGN+EYGQ+ + Q S P + G+S +VD+A+GG
Sbjct: 203 MMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLS-LVDIAAGG 261
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
T L +G VY+WG +G LG G S M P + Q + + G
Sbjct: 262 WHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKV--------QLLDGEDIVQVSCG 313
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T+ G ++ +G+ +G+LG G P++V +
Sbjct: 314 GTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPL 353
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 37/259 (14%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G E+D+ H +A L+ + V G ++L + + G++++
Sbjct: 11 LAWGSGEDGQLGMGGCDEKDW-----AHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTW 65
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + +P V + G +IV+ + LAV DKG + WG +E
Sbjct: 66 GWNQRGT--LGHPPETKTESSPAPVEA-LAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNE 122
Query: 207 YGQISES-----------EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
YGQ E I TP+ +C ++ VA+GG+ +L EG V++WG
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPTPQ---RCALKLKVQQVAAGGTHSVVLTQEGHVWTWG 179
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
P +K P + G KV + G A++ L+ WG N
Sbjct: 180 Q------PWPPGDIKQISTPVRVQGL------EKVMMIAVGAFHNLALSEDAVLWAWGNN 227
Query: 316 QYGQLGLGTVEDQPFPLKV 334
+YGQLG+G + + P++V
Sbjct: 228 EYGQLGIGDTQPRSQPIRV 246
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
L V + G G DGQ G+G + ++ V ++ + + + LA+ D G +
Sbjct: 4 LPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRV-AALDPYAVSAVVAGSRNSLAICDDGRL 62
Query: 200 FGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
F WG ++ G + E++ + S+P + GV +IV A GG C ++D+G Y+WG
Sbjct: 63 FTWGWNQRGTLGHPPETKTE-SSPAPVEALAGV-KIVQAAIGGWHCLAVDDKGRAYAWGG 120
Query: 256 --YGLLGQGPKVSRSMKPTL---IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
YG G+ P+ L IP+ + K KV+ + AG +T GH++
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPTP----QRCALKLKVQQVAAGGTHSVVLTQEGHVW 176
Query: 311 MWGK 314
WG+
Sbjct: 177 TWGQ 180
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 38/266 (14%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEE--------DYQGKWFCHNIADLEGEKIMDAVCGQ 134
+ E F +GN G+ G G +++E D++ + +I CG+
Sbjct: 43 LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFK-----------KASEIQQIACGE 91
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
++T+ +T GK+YSCG GQ LGH ++ L+ G ++ K + +AV+
Sbjct: 92 NYTVVITHDGKIYSCGNNDYGQ--LGHEQGRKRLQLILG-LDAFVFKKAACGAYHTIAVN 148
Query: 195 DKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+ G +F WG++ GQ+ S++ M+ S PR++ + G S IV +A G L + G +
Sbjct: 149 EWGQLFSWGSNSEGQLGLNSKNFMECS-PRMV-KTLGTSIIVQIACGMKHALALTNNGEL 206
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + MKP LI +TL G + + G AI+ G
Sbjct: 207 YSWGSNSEGQLGLGVDIRCEMKPKLI-NTLAG-------VPIAFIACGGYHSIAISKSGA 258
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WGKN +GQLGL +++ P ++
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQL 284
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 144/334 (43%), Gaps = 35/334 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG +TVV T K++ CG N QLG+ RK+ L+L++
Sbjct: 83 EIQQIACGENYTVVITHDG----KIYSCGNNDYGQLGHEQGRKR---LQLILGL------ 129
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ K A G HTI + + F++G+NS GQ G + + + L
Sbjct: 130 ---DAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRM----VKTL 182
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
I+ CG H L LT +G++YS G ++GQ GLG + + P L+ + G I
Sbjct: 183 GTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLI-NTLAGVPIA 241
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ +A+S G +FGWG + +GQ+ ++ Q Q +++ A G
Sbjct: 242 FIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEF 301
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP- 297
L +G V++ G YG LG G + + ++ L G S V + G
Sbjct: 302 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM--ELMG-------STVTQISCGKR 352
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T + + G +Y WG GQLG + P
Sbjct: 353 HTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTP 386
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+++I+ +A G +T+VIT + ++ GNN +GQ G QG+ I L+
Sbjct: 81 ASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHE-------QGRKRLQLILGLDAFV 133
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSS 185
A CG HT+ + E G+++S G ++GQ GL N E +P +V+ + IV+++
Sbjct: 134 FKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKT-LGTSIIVQIAC 192
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-----ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ LA+++ G+++ WG++ GQ+ EM+ P++++ GV I +A GG
Sbjct: 193 GMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMK---PKLINTLAGVP-IAFIACGGY 248
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
++ G ++ WG +G LG +R++ L Q +KV G
Sbjct: 249 HSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQL---------QTLRNAKVCYAACGE 299
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G+ ++ P +V
Sbjct: 300 EFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQV 336
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 26/247 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I IACG + T N +L+ G NS+ QLG D R + P +L+ + +P
Sbjct: 187 IVQIACGMKHALALTN----NGELYSWGSNSEGQLGLGVDIRCEMKP-KLINTLAGVP-- 239
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I +A G H+I I+ + F +G N+FGQ G D Q + + + L
Sbjct: 240 -------IAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLN-----DTQNRNLPYQLQTL 287
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
K+ A CG++ ++FLT G V++CG G GQ G G NN+ P V E+ G + +
Sbjct: 288 RNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM-ELMGSTVTQ 346
Query: 183 LSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVLS---QCKGVSRIVDVAS 237
+S LA V +G V+ WG GQ+ + S +TP+V+ S ++D
Sbjct: 347 ISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVRGPWVAPNGSSMMDFDK 406
Query: 238 GGSACTM 244
S+CT+
Sbjct: 407 QFSSCTV 413
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 19/263 (7%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-H 136
+ I++T ++ + G NS G G G D I L +KI G H
Sbjct: 10 SEVIMVTVDDDVYAMGCNSSGCLGLG-----DTASALQPRKIESLCKKKIKGLAYGSGLH 64
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
L ++SG++Y+ G+ Q G G+ N+ TP LV G + G+ ++++ LA++ +
Sbjct: 65 LLAFSDSGELYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALTSE 124
Query: 197 GDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G+VF WG + GQ S + S PR ++ G ++V +A G L D+G +Y WG
Sbjct: 125 GEVFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLYGWG 184
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y G LG G + P + + K + ++ G A+T+ G LY W
Sbjct: 185 YNGNGELGIGNN-NNQHNPVRVSNL--------HKVFITQIVCGFAHCLALTDQGELYAW 235
Query: 313 GKNQYGQLGLGTVEDQPFPLKVA 335
G N YGQLG G P+ VA
Sbjct: 236 GANSYGQLGTGYKTHHLSPVIVA 258
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 34/258 (13%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD------ 121
+IK LA G H + +D+ +T+G N++ Q G G H +
Sbjct: 53 KIKGLAYGSGLHLLAFSDSGELYTWGYNTYSQLGNGNTN----------HTLTPSLVSGV 102
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G+ ++ CG H L LT G+V++ G GQ G G Q P V I G ++V
Sbjct: 103 LAGKTVIQVGCGNHHCLALTSEGEVFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVV 162
Query: 182 KLSSAVDCVLAVSDKGDVFGW---GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
++ +A+ D GD++GW GN E G I + Q + RV + K I + G
Sbjct: 163 AIACGQLTSMALLDDGDLYGWGYNGNGELG-IGNNNNQHNPVRVSNLHKVF--ITQIVCG 219
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+ C L D+G +Y+WG YG LG G K + + P ++ L G+ + + A
Sbjct: 220 FAHCLALTDQGELYAWGANSYGQLGTGYK-THHLSPVIVAPEL-GKAVEIAACHLSHISA 277
Query: 296 GPCTFGAITNFGHLYMWG 313
A+ + G ++MWG
Sbjct: 278 ------AMFHDGKIFMWG 289
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 190 VLAVSDKGDVFGWGNSEYG--QISESEMQISTPRVLSQCKGVSRIVDVASG-GSACTMLN 246
V+ V+ DV+ G + G + ++ + ++ S CK +I +A G G +
Sbjct: 12 VIMVTVDDDVYAMGCNSSGCLGLGDTASALQPRKIESLCK--KKIKGLAYGSGLHLLAFS 69
Query: 247 DEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
D G +Y+WGY Q + ++ P+L+ L G+ V + G A+T
Sbjct: 70 DSGELYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGK-------TVIQVGCGNHHCLALT 122
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA--VGGQK 340
+ G ++ WG+N GQ G GT Q P +V +GG K
Sbjct: 123 SEGEVFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHK 160
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 31/282 (10%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+PV+ P + +K +A G +H++ + + + +GNN G+ G G +
Sbjct: 728 PVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRP------- 780
Query: 119 IADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
++G AV G +H+L + G V++ G + GQ G G + P V G + G
Sbjct: 781 -VQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSG-LNG 838
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVA 236
V SA LA+ G V+ WG + YGQ+ ++ ST R++ Q G++ +V +A
Sbjct: 839 VMAVSAGSA--HSLALRSDGTVWAWGYNFYGQLGDAT---STQRLVPIQVPGLTGVVSIA 893
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G + +G V++WGY G LG G K+ RS P +P + + S+
Sbjct: 894 AGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRS-PPVQVPGL----------AGMVSV 942
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AG A+ + G ++ WG N +GQLG GT + P+ ++
Sbjct: 943 AAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPIS 984
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 23/278 (8%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R+P+ V+ + + LA G H++ + + + +G+N FGQ G G D Q +
Sbjct: 78 RLPVRVQSLDSVVA-LAVGYQHSLALRSDGTVWAWGDNFFGQLGDG----SDAQSQ-VPI 131
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L G ++ G H+L L G V++ G+ A GQ G P V+G + G
Sbjct: 132 QVWSLNG--VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG-LSG 188
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
+V LS+ LAV G V WG++ YGQ+ + S + TP ++S GV +V
Sbjct: 189 --VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVV--- 243
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+G L +G V +WG GQ S + +P +P + G + V++L AG
Sbjct: 244 AGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRP--VPVVVPG------LTNVQALAAG 295
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G + WG N +GQ+G GT+ Q P++V
Sbjct: 296 SAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQV 333
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 57 VRIPLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
V PLPV+ + + L+ G H++ + + +G+N +GQ G G E +W
Sbjct: 175 VASPLPVQVQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTE-----RWT 229
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
++ L G K + V G H+L L G V + G GQ G+ + P +V G
Sbjct: 230 PVLVSSLTGVKSV--VAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPVVVPGLT 287
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVD 234
+ L++ LA+ G V WGN+++GQ+ + Q TP Q GV R+
Sbjct: 288 N---VQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTP---VQVPGVGRMKS 341
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+GG+ + +G+ ++WG G LG G + S+ ++P + GQ P
Sbjct: 342 IAAGGAHSLAMRADGITWAWGDDSQGQLGDG-QSSQQLRPARV----LGQRIRMP----- 391
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L G A+ G ++ WG N GQLG GT + P++V
Sbjct: 392 -LGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQV 433
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 24/268 (8%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-ADLEGEKI 127
+ LA G AH++V+ + + ++GNN++GQ G G H + + G
Sbjct: 688 HVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTST---------LHPVPVQVPGPSA 738
Query: 128 MDAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
M V G H+L + G V++ WG +G LG + P V+ + G V +S+
Sbjct: 739 MKGVAAGGSHSLAVRSDGTVWA--WGNNGSGELGDGTGLQRPRPVQVQGLGS-AVAVSAG 795
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ LAV G V+ WG + GQ+ + T V + G++ ++ V++G + L
Sbjct: 796 TNHSLAVQSDGTVWAWGGNSQGQLGDGTGI--TRYVPVRVSGLNGVMAVSAGSAHSLALR 853
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+G V++WGY GQ + + + L+P + G + V S+ AG A+ +
Sbjct: 854 SDGTVWAWGYNFYGQLGDATSTQR--LVPIQVPG------LTGVVSIAAGTHHSLAVRSD 905
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N YGQLG GT + P++V
Sbjct: 906 GTVWAWGYNFYGQLGDGTKIQRSPPVQV 933
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 30/282 (10%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQC--GRGIVQEEDYQGKWF 115
RI + P + +A G AH++++ + + +G+N++GQ G GI Q +
Sbjct: 27 RIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVR---- 82
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ L + ++ G H+L L G V++ G GQ G G + P V +
Sbjct: 83 ---VQSL--DSVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVW-SL 136
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
G +V +++ LA+ G V+ WG + +GQ+ + + +++P + Q +G+S +V +
Sbjct: 137 NG--VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGD-DTTVASPLPV-QVQGLSGVVAL 192
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
++G + + +G V +WG YG LG G R P L+ S+L G V+S
Sbjct: 193 SAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER-WTPVLV-SSLTG---------VKS 241
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++AG A+ + G + WG+N GQLG+ + +P P+ V
Sbjct: 242 VVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPVVV 283
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 61 LPVKHPSTQIKH-LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
LPV+ P H L+ +H++ + + +G+N+FGQ G G + + +
Sbjct: 429 LPVQVPGLAGVHTLSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQ-----RLLPVQV 483
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G + ++ H+L ++ G V++ G+ G+ G G ++ TP V G
Sbjct: 484 PGLAGVDTVSSM--HQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGL---SS 538
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS--QCKGVSRIVDVAS 237
+V +++ LA+ G V+ WG++ G + + +T R LS Q G+S +V +A+
Sbjct: 539 MVAVAAGSTHSLALRADGTVWAWGDNSNGALGDG----TTLRRLSPVQVPGLSGVVALAA 594
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G ++ +G V++WGY G LG G R + PT P+ S V +L
Sbjct: 595 GNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPR-VTPTQAPAL----------SGVVALA 643
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ G + WG N GQLG T ++ P V
Sbjct: 644 AGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAV 683
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P + + +A G H++ + + + +G+NS G G G + +
Sbjct: 530 PVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLR-----RLSPVQVP 584
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G ++ G ++L + G V++ G+ GQ G G + TP + G +
Sbjct: 585 GLSG--VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAP-ALSG--V 639
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGG 239
V L++ LA+ G + WG ++ GQ+ ++ ++ STP + G++ +V +A+G
Sbjct: 640 VALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTP---AAVPGLAHVVALAAGN 696
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +L+ +G SWG YG LG G + ++ P + Q S ++ + AG
Sbjct: 697 AHSLVLHADGTSSSWGNNAYGQLGDG---TSTLHPVPV--------QVPGPSAMKGVAAG 745
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G ++ WG N G+LG GT +P P++V
Sbjct: 746 GSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQV 783
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H++ + + + +G NS GQ G G ++ ++ L G +M
Sbjct: 792 VSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGIT-----RYVPVRVSGLNG--VMAVSA 844
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H+L L G V++ G+ GQ G + P V G +V +++ LA
Sbjct: 845 GSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTG---VVSIAAGTHHSLA 901
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
V G V+ WG + YGQ+ + +P V Q G++ +V VA+G ++ G V+
Sbjct: 902 VRSDGTVWAWGYNFYGQLGDGTKIQRSPPV--QVPGLAGMVSVAAGTYHSLAVHSNGTVW 959
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPS--------------------TLFGQHQFN---- 285
+WGY G LG G R + P I S T++G N
Sbjct: 960 AWGYNNHGQLGDGTTTQR-LLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQL 1018
Query: 286 ------------PKS---KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
P S V S+ +G A+ + G ++ WG GQLG G + +
Sbjct: 1019 GDGSTSDRKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLV 1078
Query: 331 PLKVA 335
P V+
Sbjct: 1079 PAGVS 1083
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCH 117
+P++ P T + +A G H++ + + + +G N +GQ G G I + Q
Sbjct: 879 VPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQ------ 932
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L G ++ G H+L + +G V++ G+ GQ G G + P I
Sbjct: 933 -VPGLAG--MVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPV----PISS 985
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGN---SEYGQISESEMQISTPRVLSQCKGVSRIVD 234
V ++A L V G V+GWG+ S+ G S S+ ++ TP S GV I
Sbjct: 986 SSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPS--SVPNGVRSI-- 1041
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
+SG + L +G V++WG+G GQ SM+ L+P+ + G
Sbjct: 1042 -SSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMR--LVPAGVSG 1084
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIV 82
N +++ CG NS QLG P+ + P P++ ST I ++ G+ H++
Sbjct: 39 NHRVYSCGDNSRGQLGQKSPQS-----------TKRPEPIQALSTVHIDLVSCGKEHSVA 87
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ FT+G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 88 VCHQGRVFTWGAGSEGQLGIGESKEISFMPT----KINSLAGIKIIQVSCGHYHSLALSE 143
Query: 143 SGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G GQ GLG +L +Q +P V+ +EG + ++++ A+S G FG
Sbjct: 144 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVK-SLEGIPLAQVAAGGTHSFALSLMGTSFG 202
Query: 202 WGNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
WGN+ GQ++ S + QI P + K ++ +V ++ G ++L ++G V+++G
Sbjct: 203 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN-VVYISCGYEHTSVLTEDGQVFTFG 259
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A+G H++++ N ++ G+NS GQ G ++ Q I L I CG
Sbjct: 27 ASGERHSLLLFSNHRVYSCGDNSRGQLG-----QKSPQSTKRPEPIQALSTVHIDLVSCG 81
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
++H++ + G+V++ G G++GQ G+G + G +I+++S LA+
Sbjct: 82 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141
Query: 194 SDKGDVFGWGNSEYGQISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
S+ G VF WG++ GQ+ S +P+ + +G+ + VA+GG+ L+ G
Sbjct: 142 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP-LAQVAAGGTHSFALSLMGTS 200
Query: 252 YSWGYGLLGQ 261
+ WG GQ
Sbjct: 201 FGWGNNRSGQ 210
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G K++ A G+ H+L L + +VYSCG + GQ G + + P ++ + I +
Sbjct: 20 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-LSTVHIDLV 78
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + +AV +G VF WG GQ I ES+ P ++ G+ +I+ V+ G
Sbjct: 79 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQVSCGHYH 137
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G + P + S + P ++V + G
Sbjct: 138 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-----EGIPLAQVAA--GGTH 190
Query: 299 TFGAITNFGHLYMWGKNQYGQLGL 322
+F A++ G + WG N+ GQL L
Sbjct: 191 SF-ALSLMGTSFGWGNNRSGQLAL 213
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 19/174 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ ++ + ++F G N QLG + + V S IPL
Sbjct: 126 IKIIQVSCGHYHSLALSE----DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL 181
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNI 119
+A G H+ ++ +F +GNN GQ +E+ Y+ H+I
Sbjct: 182 A---------QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKP----HSI 228
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L+ ++ CG +HT LTE G+V++ G + Q + + P L+ G
Sbjct: 229 GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG 282
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G +++K +S L + V+ G++ GQ+ + Q + Q I V+
Sbjct: 20 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVS 79
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G + +G V++WG G GQ G S PT I S L G K+ +
Sbjct: 80 CGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAG-------IKIIQV 131
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
G A++ G ++ WG N+ GQLGLG + Q P KV
Sbjct: 132 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 173
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 107/203 (52%), Gaps = 25/203 (12%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS-AVDCV 190
CG +HT+ L + G++YSCG GQTG NN+ + E RI +SS +
Sbjct: 41 CGLNHTILLLQDGQIYSCGSNDYGQTG-RQRNNKRFARI--DAFESMRITNVSSNGANHN 97
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQIS----TPRVLSQCKGVSR--IVDVASGGSACTM 244
LA++DK ++ WG++ GQ+ ++ + TPR Q K +S+ +V VA G S
Sbjct: 98 LAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPR---QIKSLSKFAVVQVACGQSHSLA 154
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ ++G V+SWG YG LG VS S++P I L G + + + AG
Sbjct: 155 VINDGTVFSWGSNRYGQLGIDSNVS-SVEPKQILK-LSGFY-------IVQIAAGGAHSL 205
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
AITN G L WGKN +GQLGLGT
Sbjct: 206 AITNSGALLTWGKNSFGQLGLGT 228
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 29/291 (9%)
Query: 53 VMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
++ + L H IK ++ G HTI++ + ++ G+N +GQ GR
Sbjct: 22 ILKATHVDLTTNHT---IKLISCGLNHTILLLQDGQIYSCGSNDYGQTGR------QRNN 72
Query: 113 KWFCHNIADLEGEKIMDAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---TP 168
K F I E +I + G +H L + + +Y+ G +DGQ G+ N ++ TP
Sbjct: 73 KRFAR-IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTP 131
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCK 227
++ + +V+++ LAV + G VF WG++ YGQ+ +S + P+ + +
Sbjct: 132 RQIKS-LSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLS 190
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
G IV +A+GG+ + + G + +WG +G LG G + PT + S+L QH
Sbjct: 191 GF-YIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTN-DGVLSPTCV-SSLRSQH-- 245
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G +T G ++ +G GQLG ++ P V
Sbjct: 246 -----IAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQMVV 291
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 22/257 (8%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CG T++ + +++ CG N Q G R++ N F RI
Sbjct: 39 ISCGLNHTILLLQDG----QIYSCGSNDYGQTG----RQRNNK-----RFARID---AFE 82
Query: 67 STQIKHLAT-GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
S +I ++++ G H + I D + +G+NS GQ G + + Q I L
Sbjct: 83 SMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQLG--VTDQNLKQFYRTPRQIKSLSKF 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ CGQ H+L + G V+S G GQ G+ + P + ++ G IV++++
Sbjct: 141 AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQIL-KLSGFYIVQIAA 199
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+++ G + WG + +GQ+ + +P +S + I A G +
Sbjct: 200 GGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRS-QHIAYAACGEDHTAV 258
Query: 245 LNDEGLVYSWGYGLLGQ 261
L EG V+++G G GQ
Sbjct: 259 LTKEGGVFTFGAGSSGQ 275
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG ++ +F G N QLG P +++
Sbjct: 142 VVQVACGQSHSLAVINDG----TVFSWGSNRYGQLGIDSNVSSVEPKQIL---------- 187
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K I +A G AH++ IT++ T+G NSFGQ G G G ++ L
Sbjct: 188 KLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGT-----NDGVLSPTCVSSLR 242
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ I A CG+DHT LT+ G V++ G G+ GQ G L++ +P +V
Sbjct: 243 SQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQMV 290
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT + T N F FG+N++GQ G G + K C I L+ EK+ C
Sbjct: 66 LSCGDEHTAITTGNNKLFMFGSNNWGQLGLG---SKATVNKPTC--IKALKPEKVKFVAC 120
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL LT GKVY+ G +GQ GLG + + L+ +I +LS+ + A
Sbjct: 121 GRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAA 180
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI ++ + P ++ K +S I + G + EG +
Sbjct: 181 LTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISWI---SCGYYHSAFVTTEGEL 237
Query: 252 YSWGY---GLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG--AITN 305
Y++G G LG PK+ + K P L+P E +I C G +
Sbjct: 238 YTFGEPESGKLGLPPKLLVNHKVPQLVPGI------------SEKVIQVACGGGHTVVLT 285
Query: 306 FGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 286 EKAVYTFGLGQFGQLGLGT 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 141/322 (43%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KLF G N+ QLG P + ++ P K
Sbjct: 66 LSCGDEHTAITTG----NNKLFMFGSNNWGQLGLGSKATVNKP-----TCIKALKPEK-- 114
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K +A GR HT+V+T + G N+ GQ G G D + H I+ +
Sbjct: 115 ---VKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLG-----DTDERSAFHLISFFTSQH 166
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL ++ N C+ G+ I +S
Sbjct: 167 KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNM---CVPHQVTVGKPISWISC 223
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTM 244
V+ +G+++ +G E G++ + +V G+S +++ VA GG +
Sbjct: 224 GYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVV 283
Query: 245 LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L E VY++G G GQ G + +P +I S K+ + G
Sbjct: 284 LT-EKAVYTFGLGQFGQLGLGTFTFETSEPKVIESV--------KDKKISHVCCGENHTA 334
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
IT G LY +G ++G+LGLG
Sbjct: 335 LITESGLLYTFGDGRHGKLGLG 356
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T + L+ G +LG P +L+++ ++P V
Sbjct: 221 ISCGYYHSAFVTTEGE----LYTFGEPESGKLGL--------PPKLLVNH-KVPQLVPGI 267
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++ +A G HT+V+T+ + +TFG FGQ G G E + K I ++ +K
Sbjct: 268 SEKVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFTFETSEPKV----IESVKDKK 322
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +TESG +Y+ G G G+ GLG N NQ P L
Sbjct: 323 ISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLPTL 368
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
+F +G++ +GQ+ S+ ++ P + K ++ VA G + +L G VY+ G
Sbjct: 82 LFMFGSNNWGQLGLGSKATVNKPTCIKALKP-EKVKFVACGRNHTLVLTGGGKVYATGGN 140
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G RS + S QH K++ L AG T A+T G L+MWG
Sbjct: 141 NEGQLGLGDTDERSAFHLI--SFFTSQH------KIKQLSAGSNTSAALTEDGELFMWGD 192
Query: 315 NQYGQLGLGTVEDQPFPLKVAVG 337
N GQ+GL + + P +V VG
Sbjct: 193 NSEGQIGLQNITNMCVPHQVTVG 215
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + LF G NS+ Q+G + P ++
Sbjct: 167 KIKQLSAGSNTSAALTEDGE----LFMWGDNSEGQIGLQNITNMCVPHQVT--------- 213
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P I ++ G H+ +T +TFG G+ G +++ I+
Sbjct: 214 VGKP---ISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGIS-- 268
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG HT+ LTE VY+ G G GQ GLG + + V ++ ++I
Sbjct: 269 --EKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISH 325
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+ + +++ G ++ +G+ +G++
Sbjct: 326 VCCGENHTALITESGLLYTFGDGRHGKL 353
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 39/339 (11%)
Query: 11 YGFTVVATKSKD-----KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
Y T V S++ ++ +LF G N LG H P+ K P PV
Sbjct: 41 YAVTAVVAGSRNSLAICEDGRLFTWGWNQRGTLG-HPPKTKTE---------SSPGPVHA 90
Query: 66 -PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE- 123
+I A G H + + DN A+ +G N +GQCG ++ED + +I +
Sbjct: 91 LAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGT-RALRRDIPTPQR 149
Query: 124 ---GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
K+ G H++ LT+ G V++ WG G + TP V+G +E R+
Sbjct: 150 CAPKLKVRQVAAGGTHSVVLTQEGHVWT--WGQPWPP--GDIKQISTPVRVQG-LEKVRV 204
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ + + + LA+++ G ++ WGN+EYGQ+ + Q + + + +VD+A+GG
Sbjct: 205 IAVGAFHN--LALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGW 262
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T L +G VY+WG +G LG G S M P + L G+ + + G
Sbjct: 263 HSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKV-ELLAGE-------DIVQVSCGG 314
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T G ++ +G+ +G+LG G P+ V +
Sbjct: 315 THSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDI 353
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 37/259 (14%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E+D+ H + L + V G ++L + E G++++
Sbjct: 11 LAWGSGEDGQLGMGGNEEKDW-----AHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTW 65
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + +P V + G +IV+ + LAV D G + WG +E
Sbjct: 66 GWNQRGT--LGHPPKTKTESSPGPVHA-LAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNE 122
Query: 207 YGQISES-----------EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
YGQ E I TP+ +C ++ VA+GG+ +L EG V++WG
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPTPQ---RCAPKLKVRQVAAGGTHSVVLTQEGHVWTWG 179
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
P +K P + G KV + G A+T G L+ WG N
Sbjct: 180 Q------PWPPGDIKQISTPVRVQGL------EKVRVIAVGAFHNLALTEDGILWAWGNN 227
Query: 316 QYGQLGLGTVEDQPFPLKV 334
+YGQLG G + + P++V
Sbjct: 228 EYGQLGTGDTQPRSHPIRV 246
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI E+ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGQL 211
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFGA 302
Y++G G LG +P+ L H+ P V+ G T
Sbjct: 212 YTFGEPECGKLG-------------LPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT--V 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGT 278
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 30/321 (9%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T N KL+ G N+ QLG P + V+ P K
Sbjct: 38 TFLSCGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G D + + H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLG-----DTEERSTFHLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV---CVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSAC 242
S V+ +G ++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+L E VY++G G GQ + + T +P + + K+ + G
Sbjct: 256 VVLT-EKAVYTFGLGQFGQ-LGLGTFLFETSVPKAI----EHIKDQKISFIACGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLG 330
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I+ I+CGY + T + L FG CG K G P +L+++ R+P
Sbjct: 192 ISWISCGYYHSAFVTT--EGQLYTFGEPECG-------------KLGLPNQLLVNH-RMP 235
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV ++ +A G HT+V+T+ + +TFG FGQ G G E K H
Sbjct: 236 QPVPGIPGKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--- 291
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
++ +KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 292 -IKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK--PEKVKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G RS T F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERS--------TFHLISFFTSQRKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG L + +P
Sbjct: 244 KVVQVACGGGHTVVLTEK-----AVYTFGLGQFGQLG----------LGTFLFETSVPKA 288
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++H Q I +A G HT +ITD +TFG+ G+ G G+ + C N
Sbjct: 289 IEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLR 348
Query: 122 LEGEKIMDAV-CGQDHTLFL 140
I+ V CG HTL
Sbjct: 349 F----IVQLVSCGGCHTLVF 364
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI E+ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGQL 211
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFGA 302
Y++G G LG +P+ L H+ P V+ G T
Sbjct: 212 YTFGEPECGKLG-------------LPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT--V 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGT 278
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 30/321 (9%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T N KL+ G N+ QLG P + V+ P K
Sbjct: 38 TFLSCGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G D + + H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLG-----DTEERSTFHLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTN---VCVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSAC 242
S V+ +G ++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+L E VY++G G GQ + + T +P + + K+ + G
Sbjct: 256 VVLT-EKAVYTFGLGQFGQ-LGLGTFLFETSVPKAI----EHIKDQKISFIACGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLG 330
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I+ I+CGY + T + L FG CG K G P +L+++ R+P
Sbjct: 192 ISWISCGYYHSAFVTT--EGQLYTFGEPECG-------------KLGLPNQLLVNH-RMP 235
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV ++ +A G HT+V+T+ + +TFG FGQ G G E K H
Sbjct: 236 QPVPGIPGKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--- 291
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
++ +KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 292 -IKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK--PEKVKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G RS T F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERS--------TFHLISFFTSQRKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG L + +P
Sbjct: 244 KVVQVACGGGHTVVLTEK-----AVYTFGLGQFGQLG----------LGTFLFETSVPKA 288
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++H Q I +A G HT +ITD +TFG+ G+ G G+ + C N
Sbjct: 289 IEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLR 348
Query: 122 LEGEKIMDAV-CGQDHTLFL 140
I+ V CG HTL
Sbjct: 349 F----IVQLVSCGGCHTLVF 364
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 48/304 (15%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+T ++ + GR+ T+V+T + FG N+FGQ G G D + + + L +
Sbjct: 140 NTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQLGLG-----DTRNRTAPTPVETLNNQH 194
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-----------------------LGHLN 163
I+D G DH++ +T++G V+ G+ +GQ G G L
Sbjct: 195 IIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLR 254
Query: 164 NQ-------ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SES 213
Q P LV G +E +I + D +S +G+V+ +G++E G + SE
Sbjct: 255 EQMIPDVEYTLPTLVPG-LEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSEL 313
Query: 214 EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMK 270
+ +++ P + + +I ++SG S L G VYS G+G LG G S
Sbjct: 314 KGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDS 373
Query: 271 PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
PTL+ F Q+ K K+ + AG A+ + G +Y WG G+LG G D+
Sbjct: 374 PTLLK--YFNQN----KIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENL 427
Query: 331 PLKV 334
P ++
Sbjct: 428 PKQI 431
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 122/289 (42%), Gaps = 46/289 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + G FT+V T+ K+ G G N+ QLG D R + P PV
Sbjct: 143 VEKVIGGRSFTLVLTRDG----KVLGFGENNFGQLGLGDTRNR-----------TAPTPV 187
Query: 64 KHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ--------------EE 108
+ + Q I + G H+I +T F +G N GQ G+ +V+ EE
Sbjct: 188 ETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEE 247
Query: 109 DYQGKWFCHNIAD-----------LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
G I D LE KI + CG D T L+ G VYS G G
Sbjct: 248 GGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTL 307
Query: 158 GLG-HLNNQET-PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF--GWGNSEYGQISES 213
GLG L + T P ++ E+I +LSS L ++ G+V+ GWG +
Sbjct: 308 GLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMD 367
Query: 214 EMQISTPRVLSQC-KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+P +L + +IV VA+GGS L+D+G VY+WG G G+
Sbjct: 368 TSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGK 416
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-----------------HDPRKK 46
I DI G ++ TK+ +FG G N + Q+G +
Sbjct: 195 IIDIGVGLDHSIAVTKAG----HVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGA 250
Query: 47 GNPLELVMSFVRIPLPVKHP---STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
G+ E ++ V LP P +I ++ G T +++ ++FG+N G G G
Sbjct: 251 GSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLG 310
Query: 104 IVQEEDYQGKWFCHNIADLE--GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG- 160
+ +G+ EKI G HTLFLT G VYSCGWG +G+ GLG
Sbjct: 311 ----SELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGM 366
Query: 161 HLNNQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQIS 218
+N+++P L++ + + +IVK+++ +A+ D+G V+ WGN G++ +E +
Sbjct: 367 DTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDEN 426
Query: 219 TPRVLSQCKGVSRIVDVASG 238
P+ ++ S ++D+ +G
Sbjct: 427 LPKQINFFSH-SNVIDIFAG 445
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 59 IPLPVKH--PSTQIKHLATGRAHTIVITD--NEGAFTFGNNSF----GQCGRGIVQEEDY 110
IP + H P +IK + ++ ++TD NE T N + + G + E Y
Sbjct: 70 IPTQITHLPPFLKIKQFGSSWLNSFLLTDEQNENDPTISNKVYMWGTNKSGNMSLPSEQY 129
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
+ F I L+ + + G+ TL LT GKV G GQ GLG N+ P
Sbjct: 130 R---FPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDTRNRTAPTP 186
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES----------------- 213
V + + I+ + +D +AV+ G VFGWG + GQI +
Sbjct: 187 VE-TLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGE 245
Query: 214 --------------EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
+++ + P ++ + + +I +V G + +L+ G VYS+G
Sbjct: 246 EEGGAGSLREQMIPDVEYTLPTLVPGLEQI-KISNVFCGYDSTFLLSARGNVYSFGSNEI 304
Query: 257 GLLGQGPKVS-RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ R KPT I T K++ L +G +T+ G++Y G
Sbjct: 305 GTLGLGSELKGRVTKPTKIKFT-------ETNEKIKQLSSGASHTLFLTSGGNVYSCGWG 357
Query: 316 QYGQLGLG---TVEDQPFPLK 333
G+LGLG + D P LK
Sbjct: 358 TEGRLGLGMDTSNRDSPTLLK 378
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 52/343 (15%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+I + ++ GY ++ + + ++ G NS QLG + + P
Sbjct: 345 LIDVVALSAGYSHSL----ALRTDGTVWAWGYNSLGQLGDG-------------TTIPRP 387
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
PV+ P T + L+ G +H++ + + +G N GQ G G H +
Sbjct: 388 SPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTT----------THRL 437
Query: 120 ADLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ ++ + D V G +HTL L +G V++ G +DGQ G G + +P + G
Sbjct: 438 SPVQVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLGLTN 497
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDV 235
+V LS+ LAV G V+ WG++ GQ+ + +T R+ Q G++ +V +
Sbjct: 498 ---VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGT---TTHRLTPVQVPGLTDVVAL 551
Query: 236 ASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
++G S L +G V++WG LG G R P +P + V +
Sbjct: 552 SAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRG-SPVQVPG----------LTDVVA 600
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
L AG A+ G ++ WG N YGQLG GT + FP+ V+
Sbjct: 601 LSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVS 643
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P T + L++G H++ + + + +G+N+ GQ G G ++
Sbjct: 139 PVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRR----------LS 188
Query: 121 DLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
++ + D V G H+L + G V++ G GQ G G + +P V G
Sbjct: 189 PVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPVQVSGLTN- 247
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVA 236
+V LS+ LA+ G V+ WG + YGQ+ + +TPR+ Q G++ +V ++
Sbjct: 248 --VVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGT---TTPRLSPVQVPGLTNVVALS 302
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G S L +G V++WGY G LG G RS IP +FG V +L
Sbjct: 303 AGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPS---IP--VFG------LIDVVAL 351
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ G ++ WG N GQLG GT +P P++V
Sbjct: 352 SAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQV 392
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P T + L+ G HT+ + N + +G+NS GQ G G +
Sbjct: 439 PVQVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPR-------LSPVQ 491
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L ++ G H+L + G V++ G +DGQ G G ++ TP V G + +
Sbjct: 492 MLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTD---V 548
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR-VLSQCKGVSRIVDVASGG 239
V LS+ LA+ G V+ WG++ Q+ + +TPR Q G++ +V +++GG
Sbjct: 549 VALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGT---TTPRGSPVQVPGLTDVVALSAGG 605
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L +G V++WG YG LG G R + P L+ S L G +L AG
Sbjct: 606 AHSLALRTDGTVWAWGSNYYGQLGDGTTTPR-LFPVLV-SNLTG---------TSNLYAG 654
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G WG N GQLG GT P++V
Sbjct: 655 AGHSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G +H++ + + + +G+NS GQ G G + ++ + D V
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG----------SPVQVPGLTDVVA 50
Query: 133 ---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAVD 188
G H L L G V++ G + GQ G G TP L ++ G +V LS+
Sbjct: 51 LSAGNHHCLALRTDGTVWAWGSNSSGQLGDG----TTTPRLSSVQVPGLTDVVALSAGSS 106
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLND 247
LA+ G V+ WG + YGQ+ + +TPR+ Q G++ +V ++SG L
Sbjct: 107 YTLALRTDGTVWAWGYNFYGQLGDGT---TTPRLAPVQVPGLTDVVALSSGIYHSLALRT 163
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WG G LG G +R + P +P + V +L AG A+
Sbjct: 164 DGTVWAWGDNASGQLGDG-TATRRLSPVQVPG----------LTDVVALSAGGYHSLAVR 212
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++ WG N GQLG GT + P++V+
Sbjct: 213 TDGTVWAWGSNFSGQLGDGTATPRLSPVQVS 243
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G HT ++T N + FG+N++GQ G G ++ K C + L+ EK AVC
Sbjct: 35 ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLG---SKNTVSKPTC--VKALKPEKTKLAVC 89
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE G VY+ G ++GQ GLG + T L+ +I +L++ A
Sbjct: 90 GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAA 149
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
V++ G +F WG++ GQI E +S P + K VS I + G ++ +G +
Sbjct: 150 VTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVSSI---SCGYYHSALITGDGEL 206
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
Y++G G+ + +K +P + G + KV + G +T +Y
Sbjct: 207 YTFGEPENGKLGLLPEQLKNNRVPQPVPGIME-----KVNKVACGGEHTVVLTE-TDVYT 260
Query: 312 WGKNQYGQLGLGT 324
+G QYGQLG GT
Sbjct: 261 FGLGQYGQLGHGT 273
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
++ I+CGY + + T + L+ G + +LG + K N R+P PV
Sbjct: 187 VSSISCGYYHSALITGDGE----LYTFGEPENGKLGLLPEQLKNN---------RVPQPV 233
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + +TFG +GQ G G E K H L
Sbjct: 234 PGIMEKVNKVACGGEHTVVLTETD-VYTFGLGQYGQLGHGTFIFETSVPKSVKH----LR 288
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
KI + CG++HT + E+G +++ G G G+ GLG N NQ P L
Sbjct: 289 RHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTL 337
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIV 233
+ ++ V +S + V+ G ++ +G++ +GQ+ S+ +S P + K +
Sbjct: 27 FKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKL 86
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
V G + + ++G VY+ G G LG G RS T F + K+
Sbjct: 87 AVC-GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERS--------TFHLISFFTNQHKI 137
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ L AG T A+T G L++WG N GQ+GL P +V VG
Sbjct: 138 KQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDVG 184
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M K+ +ACG TVV T++ ++ GL QLG+ + +P
Sbjct: 237 MEKVNKVACGGEHTVVLTETD-----VYTFGLGQYGQLGHG----------TFIFETSVP 281
Query: 61 LPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW---FC 116
VKH +I ++ G HT V+ +N FTFG+ G+ G G EE+Y ++ C
Sbjct: 282 KSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLG---EENYTNQFDPTLC 338
Query: 117 HNIADLEGEKIMDAVCGQDHTLFL 140
+N ++ CG H L
Sbjct: 339 YNFLRF---TVLLVACGGCHMLVF 359
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 21/248 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN GQ G G+ ++ + CH + G + + CG HTLFL + G VY+CG
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPR-ICHVFS---GRGLKEVACGGQHTLFLLQDGSVYTCGS 59
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-- 209
+ GQ LGH +P LV G ++ ++I +S +AV+++G VF WG + GQ
Sbjct: 60 NSCGQ--LGHDKAGNSPELV-GALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLG 116
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVS 266
+ +E + PR+L + S I V G C L+ +G +++WG G LG G +
Sbjct: 117 LETAETAVRIPRLLKKLCDHS-ISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGET 175
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ P+ + S L G + + AG A++ G ++ WGKN+ GQLGL +
Sbjct: 176 SKLSPSPVKS-LAG-------IPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQ 227
Query: 327 DQPFPLKV 334
D+ P +
Sbjct: 228 DRAVPCHI 235
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 49/343 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG T+ + ++ CG NS QLG HD K GN ELV +
Sbjct: 35 LKEVACGGQHTLFLLQDG----SVYTCGSNSCGQLG-HD--KAGNSPELVGAL------- 80
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +I ++ GRAH++ + + F +G GQ G + + + L
Sbjct: 81 --DTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRL----LKKLC 134
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVK 182
I VCG H + L+ G++++ G + GQ GLG ++ +P V+ + G + +
Sbjct: 135 DHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKS-LAGIPLAQ 193
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ D A+S G VFGWG ++ GQ+ ++ Q + R+V ++ G
Sbjct: 194 ITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHT 253
Query: 243 TMLNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
L G ++++G G LG G P+ + T + G+H
Sbjct: 254 AALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHH--------- 304
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED--QPFPLK 333
T + + G +Y +G N +GQLG G + D P P+K
Sbjct: 305 ------TLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPHPVK 341
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G HT+ + + +T G+NS GQ G D G + L+ +KI
Sbjct: 35 LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLG------HDKAGN-SPELVGALDTQKITM 87
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H++ + E G+V+ G G GQ GL P L++ ++ I ++
Sbjct: 88 VSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLK-KLCDHSISQVVCGNQ 146
Query: 189 CVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+S G +F WG + GQ + + E +P + G+ + + +GG C L+
Sbjct: 147 HCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIP-LAQITAGGDHCFALS 205
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+ WG G LG K R+ +P + +F +V + G A+
Sbjct: 206 LSGAVFGWGKNKAGQLGLNDKQDRA-----VPCHI----KFLRSQRVVYISCGDEHTAAL 256
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T G L+ +G GQLG G+ ++ P +V
Sbjct: 257 TKSGGLFTFGDGSRGQLGHGSSNNELLPRRV 287
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + + P + F+R S ++ +++ G HT +T +
Sbjct: 210 VFGWGKNKAGQLGLNDKQDRAVPCHI--KFLR--------SQRVVYISCGDEHTAALTKS 259
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG+ S GQ G G E + +L G ++ CG+ HTL F+ SG
Sbjct: 260 GGLFTFGDGSRGQLGHGSSNNE-----LLPRRVMELMGTEVSQITCGRHHTLAFVPSSGT 314
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
VY+ G + GQ G G L + +P V+ +
Sbjct: 315 VYAFGCNSHGQLGTGILADLRSPHPVKNDF 344
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 22/252 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+++T ++ + G+N+ G G G Q Y K I +L G+ I G+ H L
Sbjct: 37 LIVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKK-----IKELCGKDIKTFAYGKGPHVLA 91
Query: 140 LTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LTE GKVYS WG + LG+ NNQ + + E I+ ++ LA+++ G+
Sbjct: 92 LTEEGKVYS--WGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGE 149
Query: 199 VFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
V+ WG + GQ+ ++ + PR L+ +++ ++ G S ++ + G VYSWG
Sbjct: 150 VYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWG 209
Query: 256 YGLLGQG--PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
+GQ + P I S K +E ++ G A+++ G LY+WG
Sbjct: 210 CNDVGQLGIENNNDQFHPCKITSL--------AKIVIEKVVCGSIHTLALSDEGVLYVWG 261
Query: 314 KNQYGQLGLGTV 325
N YGQLGL TV
Sbjct: 262 DNNYGQLGLTTV 273
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCHNIADLEGE 125
I +A G H++ +T++ + +G N+ GQ G +VQ+ + + L G+
Sbjct: 131 IIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNF------TLTGK 184
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKL 183
K++ CG ++ +T +G+VYS G GQ G+ + N+Q PC + +I E++V
Sbjct: 185 KVICISCGDSFSVVVTNNGEVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCG 244
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASG 238
S LA+SD+G ++ WG++ YGQ ++ + I P L + + R++D+A+
Sbjct: 245 SIH---TLALSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKL-EVPEMRRVLDIATS 297
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAV 193
+ L +T+ VY+ G G G+G + P ++ E+ G+ I + VLA+
Sbjct: 34 NEALIVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIK-ELCGKDIKTFAYGKGPHVLAL 92
Query: 194 SDKGDVFGWG-NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+++G V+ WG N Y + Q TP +++ I+D+A G L ++G VY
Sbjct: 93 TEEGKVYSWGQNCHYELGNTFNNQALTPGIITNLCN-EFIIDIACGSHHSLALTNDGEVY 151
Query: 253 SWGYGLLGQ-GPKVSRSMK---PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+WG GQ G ++ P + TL G+ KV + G +TN G
Sbjct: 152 AWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGK-------KVICISCGDSFSVVVTNNGE 204
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+Y WG N GQLG+ DQ P K+
Sbjct: 205 VYSWGCNDVGQLGIENNNDQFHPCKIT 231
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ I+CG F+VV T N +++ G N QLG + + +P + + S +I
Sbjct: 185 KVICISCGDSFSVVVTN----NGEVYSWGCNDVGQLGIENNNDQFHPCK-ITSLAKIV-- 237
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV 105
I+ + G HT+ ++D + +G+N++GQ G V
Sbjct: 238 -------IEKVVCGSIHTLALSDEGVLYVWGDNNYGQLGLTTV 273
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 102 RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH 161
RG + +D + ++ + + L G+ + CG HT+ L G+V+S G G G G G+
Sbjct: 172 RGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGN 231
Query: 162 LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE--YGQISESEMQIST 219
L ++ +P ++ G + +V ++ + +S+ G+++ WG + G + +S + +
Sbjct: 232 LRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTK 291
Query: 220 PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
PR++ G +RIV VA G S ++++EG VYS+G +G LGQG + + KPT++P+
Sbjct: 292 PRLVDALYG-TRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAIT-KPTMVPN 349
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ + + G AI G L+MWG GQLG G
Sbjct: 350 LV----------SICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQG 386
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 147/355 (41%), Gaps = 53/355 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR--KKGNPLELVMSFVRI 59
+ + +AC + V S+D NL +G + LGY D K+ P LV +
Sbjct: 248 VNVVHVACYENHSAVI--SEDGNLYTWG---KAGPFLGYMDDSVTKQTKP-RLVDALY-- 299
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
T+I +A GR+HT+VI + ++FG N FG+ G+G ++ N+
Sbjct: 300 -------GTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQG--HDKAITKPTMVPNL 350
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
I CG+ H+ + E G ++ GWGA GQ G G + +P V G +
Sbjct: 351 V-----SICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNG-FNDQP 404
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGN---SEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
+ +S A++ G + WG+ S+ G S ++S+PR + G+ R +
Sbjct: 405 LEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGI-RPTQIN 463
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQ-----------GPKVSRSMKPTLIPSTLFGQ---- 281
G + ++ G +++WG + GQ P S+ + G+
Sbjct: 464 CGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHIG 523
Query: 282 ----HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
H + P +V+S +A +F AI H Q G + G+ + +PL
Sbjct: 524 CLVGHGWVPDEEVKSCMACKKSFTAIRRRHHC-----RQCGGIFCGSCSTKRYPL 573
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 139/318 (43%), Gaps = 54/318 (16%)
Query: 21 KDKNLKLFGCGLNSDSQLGYHD--PRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA 78
KD + L+ G +LG+ D PR N +E ++ + +A G +
Sbjct: 158 KDNSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLG------------QNVTMIACGGS 205
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
HTI + F++G G G G +++ Y + D+ ++ C ++H+
Sbjct: 206 HTIALNSKGQVFSWGAGPQGCLGHGNLRDR-YSPLMIDGPLRDVN---VVHVACYENHSA 261
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
++E G +Y+ WG G LG++++ Q P LV + G RIV+++ L +
Sbjct: 262 VISEDGNLYT--WGKAGPF-LGYMDDSVTKQTKPRLVDA-LYGTRIVQVACGRSHTLVID 317
Query: 195 DKGDVFGWGNSEYGQISESEMQIST-----PRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
++G V+ +G +++G++ + + T P ++S CK V+ G ++++G
Sbjct: 318 EEGRVYSFGINKFGELGQGHDKAITKPTMVPNLVSICK-------VSCGRHHSAAIDEDG 370
Query: 250 LVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFN--PKSKVESLIAGPCTFGAIT 304
+++ WG+G LGQG P +LF N +E + G AIT
Sbjct: 371 VLFMWGWGARGQLGQGE-----------PKSLFSPTPVNGFNDQPLEDVSCGYGHTAAIT 419
Query: 305 NFGHLYMWGKNQYGQLGL 322
G Y WG N Q G+
Sbjct: 420 ANGVAYCWGDNASSQCGV 437
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 21/276 (7%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
IP+ VK + ++ G H++ + + + +G+ ++GQ + ++ F
Sbjct: 84 IPVRVKGLK-DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRD-------FTTP 135
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ E + I+ G D +L + G V++ G G+ G+G L P V+G +
Sbjct: 136 VKVKELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGL---K 192
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+V +S+ + LA+ G V+ WG +E G++ + T V + KG+S ++ +++G
Sbjct: 193 DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAG 252
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G LN +G V+ WG G++ + K+ S P I +KV ++ AG
Sbjct: 253 GFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWL----------NKVVAIAAGYR 302
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G +++WG N YG LG E P++V
Sbjct: 303 HSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQV 338
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 117 HNIADLEGE--KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
N +L+GE K++ + G HTL + + G V++ G+ GQ G G + P V+G
Sbjct: 32 ENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGL 91
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIV 233
+ +V +S+ LA+ G V+ WG++ YGQ S+ +TP + K + IV
Sbjct: 92 ---KDVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTP---VKVKELKNIV 145
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+A+G + +G V++WG +G LG G S+KP+ +P + G V
Sbjct: 146 AIAAGWDFSLAVGSDGSVWAWGINNHGELGIG-----SLKPSAVPVKVKGLKD------V 194
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
++ AG A+ G ++ WG N+ G+LG ED + V V G
Sbjct: 195 VAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKG 242
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 73/328 (22%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWF 115
+P+ VK + +A GR H++ +T N + +GNN+FGQ GR Y+ KW
Sbjct: 334 LPVQVKGLKNVVA-VAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL 392
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-- 173
+ ++ G HTL + G V+S G GQ G G + P V+G
Sbjct: 393 ---------DNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLN 443
Query: 174 ----------------------------EIEGER------------------IVKLSSAV 187
+ E+ I +++ +
Sbjct: 444 KAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGL 503
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
D +L + G+++G GN Y + ++ +S+ L + + + +A+G +
Sbjct: 504 DYILVLRKDGNIWGCGNDFYFR-KFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRT 562
Query: 248 EGLVYSWGYGLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+G V+SWG L K ++ S KP I S V + AG A+
Sbjct: 563 DGTVWSWGDTNLDNKEKYLNFSEKPVKIKGL----------SGVVKVAAGKYHSLALKKD 612
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N YGQLG GT E P++V
Sbjct: 613 GTVWSWGYNAYGQLGNGTRETSFVPVRV 640
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 135/328 (41%), Gaps = 35/328 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA G+ F++ ++ G+N+ +LG + +P+ V
Sbjct: 144 IVAIAAGWDFSLAVGSDGS----VWAWGINNHGELGIGSLKPSA-----------VPVKV 188
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + ++ G H++ + + +++G N G+ G ++ ++D
Sbjct: 189 KGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-- 245
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++ G H++ L + G V+ WG G ++N P +R ++V +
Sbjct: 246 ---VIAISAGGFHSIALNKDGAVWI--WGGGIIEKNGKIDNSYIPVRIRWL---NKVVAI 297
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
++ +A+ D G V+ WG++ YG + + + S V Q KG+ +V VA+G
Sbjct: 298 AAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPV--QVKGLKNVVAVAAGRLHSV 355
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
L G +++WG GQ + + S L ++ V ++ AG AI
Sbjct: 356 ALTKNGTIWAWGNNAFGQLGRENNSFSLNL-------PYKVKWLDNVVAIAAGGSHTLAI 408
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G ++ WG N GQLG GT + P
Sbjct: 409 KRDGTVWSWGANNKGQLGNGTYKSSYIP 436
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 145/375 (38%), Gaps = 72/375 (19%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +A G +V TK N ++ G N+ QLG ++ N L +P V
Sbjct: 344 VVAVAAGRLHSVALTK----NGTIWAWGNNAFGQLG-----RENNSFSL-----NLPYKV 389
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE--------------- 108
K + +A G +HT+ I + +++G N+ GQ G G +
Sbjct: 390 KWLDNVVA-IAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLV 448
Query: 109 ----------DYQGK-WFCHNIADLEGEK------------------IMDAVCGQDHTLF 139
D G W I + EK I + G D+ L
Sbjct: 449 EAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILV 508
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
L + G ++ CG + + T + I+ R +++ LAV G V
Sbjct: 509 LRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVR--SIAAGYFHSLAVRTDGTV 566
Query: 200 FGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
+ WG++ + E ++ + KG+S +V VA+G L +G V+SWGY
Sbjct: 567 WSWGDT---NLDNKEKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAY 623
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
GQ +R + + +P + G + V ++ AG A+ G +++WG N GQ
Sbjct: 624 GQLGNGTR--ETSFVPVRVKGLNN------VVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675
Query: 320 LGLGTVEDQPFPLKV 334
LG +E PLKV
Sbjct: 676 LGRRNIEFSTVPLKV 690
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 30/253 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT+IA G + +V KD N+ +GCG + ++ + + + V +R+ +
Sbjct: 496 ITEIAGGLDYILVL--RKDGNI--WGCGND------FYFRKFTDSSVSSVTKLIRLD-NI 544
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K+ ++ +A G H++ + + +++G+ + +E Y F ++
Sbjct: 545 KN----VRSIAAGYFHSLAVRTDGTVWSWGDTNLDN-------KEKYLN--FSEKPVKIK 591
Query: 124 G-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G ++ G+ H+L L + G V+S G+ A GQ G G P V+G +V
Sbjct: 592 GLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVA 648
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ +A+ G V+ WG++ GQ+ ++ ST V + + + +V +A+G +
Sbjct: 649 IAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFST--VPLKVEKLDNVVAIAAGDTHS 706
Query: 243 TMLNDEGLVYSWG 255
L +G V+ WG
Sbjct: 707 VALKKDGTVWVWG 719
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 148/324 (45%), Gaps = 36/324 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +++CG + V T N KL+ G N QLG+ + + P S V+ P
Sbjct: 37 VVNLSCGDEHSAVVTA----NGKLYTFGCNDWGQLGHGNTKSYTKP-----SVVKKLKPE 87
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + +A GR HTI T++ ++FG GQ G G D + I L+
Sbjct: 88 K-----VYMVACGRNHTIAATESGHLYSFGCGGDGQLGHG-----DAEDSHVPKIIEGLD 137
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+K CG D + +TE+G++Y+ G +GQ GLG ++T R + G ++ +
Sbjct: 138 VQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLG----EDTEIPTRLHLHG-KVRMV 192
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S + V++ G ++ G E G++ Q+ L + K + V VA+ G+ T
Sbjct: 193 SCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFT 252
Query: 244 -MLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ G VY++G G LG G + + P IP LF K K ++ G
Sbjct: 253 AVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIP--LF------EKVKARTVSCGESF 304
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
IT G+LY +G ++G+LGLG
Sbjct: 305 TAVITKHGNLYTFGDGRHGKLGLG 328
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 115 FCHNIAD---LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
F N+A+ + + +++ CG +H+ +T +GK+Y+ G GQ G G+ + P +V
Sbjct: 22 FADNLANKFWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVV 81
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVS 230
+ +++ E++ ++ + +A ++ G ++ +G GQ+ + + S P+++ V
Sbjct: 82 K-KLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLD-VQ 139
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ +A G + + G +Y+WG GQ + + T IP+ L + KV
Sbjct: 140 KYKHLACGSDFSAAITENGELYTWGSCGEGQ----NGLGEDTEIPTRL------HLHGKV 189
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ G +T G LYM G+ + G+LGL
Sbjct: 190 RMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGL 221
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 17/158 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++CGY V T+ L+ CG +LG D + N +L
Sbjct: 188 KVRMVSCGYYHMAVVTEDG----SLYMCGEKEGGKLGL-DHEQLDNTSQL--------QK 234
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+K Q+ A G T V+T N +TFG + GQ G G E F I
Sbjct: 235 IKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMME----TEFPERIPLF 290
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG 160
E K CG+ T +T+ G +Y+ G G G+ GLG
Sbjct: 291 EKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLG 328
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRK--KGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
KL+ CG ++ +LG D + P+ + +V +K S +G H + +
Sbjct: 2987 KLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYV-----IKKVSVH-----SGGKHALAL 3036
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
T + F++G G+ G G D I L+ ++I D CG H+ +T S
Sbjct: 3037 TQDGKVFSWGEGEDGKLGHGNSISLDKP-----RLIESLKSKRIRDIACGSGHSAAITSS 3091
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFG 201
G++Y+ G G G+ G G Q P LV+ + G+RI++++ S +A++ G V+
Sbjct: 3092 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLV-GQRIIQIACGSRDAQTMALTADGLVYS 3150
Query: 202 WGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG+ ++G++ TP ++ + G+ +V + G L G V++WG Y
Sbjct: 3151 WGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTWGKGDYF 3209
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G KPTL+ L G+ KV + G A+T+ G +Y WG N +
Sbjct: 3210 RLGHGND-HHVRKPTLVEG-LRGK-------KVIHVAVGALHCLAVTDIGQVYAWGDNDH 3260
Query: 318 GQLGLGT 324
GQ G GT
Sbjct: 3261 GQQGNGT 3267
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG +N + P L + I+ V + S
Sbjct: 2972 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKK---VSVHS 3028
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + + PR++ K RI D+A G
Sbjct: 3029 GGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKS-KRIRDIACGSGHSAA 3087
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G ++S KP L+ S L GQ ++ + G
Sbjct: 3088 ITSSGELYTWGLGEYGRLGHGDTATQS-KPKLVQS-LVGQ-------RIIQIACGSRDAQ 3138
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG +G+LG G
Sbjct: 3139 TMALTADGLVYSWGDGDFGKLGRG 3162
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 28/261 (10%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--IADLEGEKIMDAVCGQDH 136
H + +T + +++GN G+ G G W+ I L + I CG +
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHG-------DRAWYDEPKLIEALVEKNITFIACGSTY 568
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVS 194
+ L+ +G++Y+ G G G+ G G+ +N P LV + G +V ++ S L V+
Sbjct: 569 SAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTA-LNGHMVVYVACGSGDSQTLCVT 627
Query: 195 DKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
G VF WG+ YG++ S TP+++ + ++ + V GG L G VY+
Sbjct: 628 ASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDIN-VAKVYCGGQFSAALTAYGEVYT 686
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P +I KV+ L G A+T +Y
Sbjct: 687 WGKGEAYRLGHGNE-DHVRYPKII--------DILKTKKVKELCVGNLHVLALTEDQLIY 737
Query: 311 MWGKNQYGQL--GLGTVEDQP 329
WG+N YGQ+ LGTV +P
Sbjct: 738 GWGRNDYGQIDPALGTVVPEP 758
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + T S + L+ GL +LG+ D + P +LV S V
Sbjct: 3074 RIRDIACGSGHSAAITSSGE----LYTWGLGEYGRLGHGDTATQSKP-KLVQSLV----- 3123
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
+I +A G A T+ +T + +++G+ FG+ GRG G C+
Sbjct: 3124 ----GQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG--------GSDGCYTPL 3171
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
I L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3172 LIDRLNGLGVVQIECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-L 3228
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3229 RGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQ 3262
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I +L
Sbjct: 4035 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKL-----IEEL 4089
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G +Q TP L+ ++ +++
Sbjct: 4090 LGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA-LQDYKVID 4148
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4149 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VVKVECGS 4207
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G +Y+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4208 QFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4258
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A T+ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4259 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKK 4303
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 27/260 (10%)
Query: 85 DNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTE 142
D GA + +G+N GQ G ++ + C +++ L ++ G + TLF +T
Sbjct: 3950 DGSGAIYGWGHNHRGQLGG--LEGAKVKLPVLCESLSALRPVQL----TGGEQTLFAVTA 4003
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVF 200
GKVY+ G+GA G+ G+G ++ P L+ + +++ S C LA+S +G V+
Sbjct: 4004 DGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHC-LALSSEGHVY 4062
Query: 201 GWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
WG + G++ + + P+++ + G + IVD+A GG + G +Y+WG Y
Sbjct: 4063 SWGEGDDGKLGHGNRLSYDRPKLIEELLG-TEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI--AGPCTFGAITNFGHLYMWGK 314
G LG G + + P LI + KV + +G +T+ +++ WG
Sbjct: 4122 GRLGHGDSEDQ-LTPKLIEAL--------QDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4172
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
YG+LG G + P+K+
Sbjct: 4173 GDYGKLGRGGSDGCKIPMKI 4192
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 14/227 (6%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+S+ R L + T+I +A G H+ IT +T+G +G+ G G D + +
Sbjct: 4078 LSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG-----DSEDQ 4132
Query: 114 WFCHNIADLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
I L+ K++D C G TL +T+ V+S G G G+ G G + + P +
Sbjct: 4133 LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKI 4192
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVS 230
+ G +VK+ +A++ G ++ WG +Y ++ ++ + PR ++ +G
Sbjct: 4193 ES-LAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-K 4250
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+I+ +A+G C D+G V++WG G LG G S +P L+
Sbjct: 4251 KIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG-TTSALQRPRLV 4296
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ VYS G G G+ G G + P L+ +E + I ++ A+S
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVE-KNITFIACGSTYSAALSS 574
Query: 196 KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + + P +++ G +V VA SG S + G+V+
Sbjct: 575 NGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNG-HMVVYVACGSGDSQTLCVTASGIVF 633
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T +G +
Sbjct: 634 SWGDGNYGKLGRG-GCDGSKTPKIVDKLL--------DINVAKVYCGGQFSAALTAYGEV 684
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
Y WGK + +LG G + +P
Sbjct: 685 YTWGKGEAYRLGHGNEDHVRYP 706
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + V E+ + + V ++ + VS +G ++ G G+
Sbjct: 2939 WGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGR 2998
Query: 210 ISE-SEMQISTPR---VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQG 262
+ + + P+ LSQ V + V V SGG L +G V+SWG G LG G
Sbjct: 2999 LGLGDDSNVCEPKPIPFLSQY--VIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHG 3056
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+S KP LI S ++ + G AIT+ G LY WG +YG+LG
Sbjct: 3057 NSISLD-KPRLIESL--------KSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGH 3107
Query: 323 GTVEDQPFP-LKVAVGGQK 340
G Q P L ++ GQ+
Sbjct: 3108 GDTATQSKPKLVQSLVGQR 3126
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G ++ ++ N +T+G ++G+ G G + + L G ++
Sbjct: 559 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHG-----NSDNVMIPTLVTALNGHMVVY 613
Query: 130 AVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG TL +T SG V+S G G G+ G G + +TP +V ++ + K+
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIV-DKLLDINVAKVYCGG 672
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A++ G+V+ WG E ++ +E + P+++ K ++ ++ G L
Sbjct: 673 QFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILK-TKKVKELCVGNLHVLALT 731
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQH 282
++ L+Y WG GQ P + + +PTL P TL G++
Sbjct: 732 EDQLIYGWGRNDYGQIDPALGTVVPEPTLCP-TLSGKN 768
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
D +L+ G ++GWG++ GQ+ E ++ P VL + R V + G +
Sbjct: 3944 DWMLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAVT 4002
Query: 247 DEGLVYSWGYGLLGQGPK--VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G VY+ GYG +G+ M PTL+ S QH F K V S G A++
Sbjct: 4003 ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESI---QHVFVKKVAVNS---GGKHCLALS 4056
Query: 305 NFGHLYMWGKNQYGQLGLG 323
+ GH+Y WG+ G+LG G
Sbjct: 4057 SEGHVYSWGEGDDGKLGHG 4075
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D +IP+
Sbjct: 4145 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKIPMK 4191
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4192 IESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4246
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + T+ G+V++ G +GQ G G + + P LV ++G++I
Sbjct: 4247 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA-LQGKKIT 4305
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4306 RVACGSAHTLAWS 4318
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 237 SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
S G+ L + VYSWG G LG G + +P LI + + + + +
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYD-EPKLIEALV--------EKNITFI 562
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQ 339
G A+++ G LY WG+ YG+LG G ++ P L A+ G
Sbjct: 563 ACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGH 609
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+T+G + GQ G G Q + L+G+ ++ A G ++ F+T G++Y+
Sbjct: 40 YTWGRSDLGQTGSGRDQNSTAP-----EPVQALQGKDVVHAAGGSYNSAFVTRDGELYTT 94
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G Q G+ P V +E + ++ +LAV D G + WG++EYGQ
Sbjct: 95 GSNDARQLGVKGREVALEPIRVSA-LEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQ 153
Query: 210 ISESEMQIST--PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
+ E+ S PRVL + +G + VA+G + L G VYS+G +G LG G
Sbjct: 154 LGTGEVGASAAQPRVLKRIRG-AHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHG-D 211
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
V+ KPTL+ P++ V S+ AG A++ G ++ WG+N+YGQLG G
Sbjct: 212 VNNRAKPTLV-------QALWPEAIV-SIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGE 263
Query: 325 VEDQPFPLKV 334
+ P V
Sbjct: 264 FGNAFLPQPV 273
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 25/261 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNS---FGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ H A G ++ +T + +T G+N G GR + E ++ LE
Sbjct: 72 VVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPI--------RVSALEMNN 123
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ CGQ H L + ++G + + G GQ G G + V I G ++++
Sbjct: 124 VHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAG 183
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G V+ +G +G + ++ L Q IV +A+G ++
Sbjct: 184 ATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVS 243
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V++WG YG LG G + + P +P + + G A+
Sbjct: 244 LSGRVFTWGRNKYGQLGNG-EFGNAFLPQPVPGI----------EQAVQVACGDHHCIAL 292
Query: 304 TNFGHLYMWGKNQYGQLGLGT 324
T +G +Y WG + GQLG G+
Sbjct: 293 TRWGEVYTWGLHSSGQLGQGS 313
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
++ WG S+ GQ Q ST Q +V A G + +G +Y+ G
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98
Query: 259 LGQGPKVSR--SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
Q R +++P + + + V + G A+ + GHL WG N+
Sbjct: 99 ARQLGVKGREVALEPIRVSALEM--------NNVHGVACGQGHMLAVVDNGHLAAWGSNE 150
Query: 317 YGQLGLGTV---EDQPFPLK 333
YGQLG G V QP LK
Sbjct: 151 YGQLGTGEVGASAAQPRVLK 170
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA G F+ + S ++F G N QLG E +F+ P+P
Sbjct: 229 IVSIAAGEYFSAAVSLSG----RVFTWGRNKYGQLGNG---------EFGNAFLPQPVPG 275
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC--HNIAD 121
+ Q+ A G H I +T +T+G +S GQ G+G + C +
Sbjct: 276 IEQAVQV---ACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDS 332
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L + I G H+ F++ +++ G +GQ L + + P V G + G +
Sbjct: 333 LADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRVPG-LPGLPMR 391
Query: 182 KLSSAVDCVLAVSDK 196
+A D +AV D+
Sbjct: 392 FAVAAGDHSIAVLDE 406
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 37/250 (14%)
Query: 98 GQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
GQ G + + ++ + N G + +AVCG H++FL G VY+CG GQ
Sbjct: 10 GQLGIEVERNSMFEPR----NCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSNGCGQ- 64
Query: 158 GLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEM 215
LGH +P LV G ++ +RI +S +AV+++G VF WG + GQ + +E
Sbjct: 65 -LGHNKPGTSPELV-GALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEA 122
Query: 216 QISTPRVLSQ-CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-----LGQGPKVSRSM 269
+ PR++ + C RI V G C L+ +G +++WG LG+G
Sbjct: 123 AVRIPRLIKRLCD--HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE------ 174
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYGQLGLGT 324
PS LF Q P + + T G A++ G ++ WGKN+ GQLGL
Sbjct: 175 -----PSKLFPQ----PLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLND 225
Query: 325 VEDQPFPLKV 334
++D+ P +
Sbjct: 226 IQDRAVPCHI 235
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG N QLG++ P G ELV + + +I ++ G+AH++ + +
Sbjct: 54 VYTCGSNGCGQLGHNKP---GTSPELVGAL---------DTQRITLVSCGQAHSMAVNEQ 101
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F +G GQ G G + + I L +I +CG H + L++ G++
Sbjct: 102 GQVFAWGAGDGGQLGLGTTEAAVRIPRL----IKRLCDHRIAQVMCGNQHCIALSKDGQL 157
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G GQ GLG + + G + K+++ D A+S G VFGWG ++
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNK 217
Query: 207 YGQISESEMQ 216
GQ+ +++Q
Sbjct: 218 AGQLGLNDIQ 227
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--------IAD 121
+K G H++ + + +T G+N GQ G HN +
Sbjct: 35 LKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLG---------------HNKPGTSPELVGA 79
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERI 180
L+ ++I CGQ H++ + E G+V++ G G GQ GLG P L++ + RI
Sbjct: 80 LDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIK-RLCDHRI 138
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASG 238
++ +A+S G +F WG + GQ+ + + S P+ L G+ + + +G
Sbjct: 139 AQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIP-LAKITAG 197
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ 261
G L+ G V+ WG GQ
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQ 220
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+IT ++CG ++ + ++F G QLG L + VRIP
Sbjct: 84 RITLVSCGQAHSMAVNEQG----QVFAWGAGDGGQLG----------LGTTEAAVRIPRL 129
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +I + G H I ++ + FT+G N+ GQ G G + K F +
Sbjct: 130 IKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLG----KGEPSKLFPQPLKS 185
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGER 179
L G + G DH+ L+ SG V+ GWG + GQ GL + ++ PC ++ + ++
Sbjct: 186 LAGIPLAKITAGGDHSFALSLSGAVF--GWGKNKAGQLGLNDIQDRAVPCHIKF-LRSQK 242
Query: 180 IVKLS 184
+V +S
Sbjct: 243 VVHIS 247
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 58/183 (31%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT-- 84
+FG G N QLG +D + + P + F+R S ++ H++ G HT +T
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHI--KFLR--------SQKVVHISCGDEHTAALTKV 259
Query: 85 ----------------------------------------DNEGAFTFGNNSFGQCGRGI 104
+ G FTFG+ S+GQ G G
Sbjct: 260 RIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGS 319
Query: 105 VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLN 163
E + +L G ++ CG+ HTL F SG VY+ G + GQ G G L+
Sbjct: 320 TSNE-----LLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELS 374
Query: 164 NQE 166
++
Sbjct: 375 AEK 377
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 64/257 (24%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG + +K +LF G N+ QLG KG P +L P P
Sbjct: 137 RIAQVMCGNQHCIALSKDG----QLFTWGQNTSGQLGL----GKGEPSKL------FPQP 182
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K + + + G H+ ++ + F +G N GQ G +Q+ CH I
Sbjct: 183 LKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVP----CH-IKF 237
Query: 122 LEGEKIMDAVCGQDHT------------------------------------------LF 139
L +K++ CG +HT L+
Sbjct: 238 LRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLW 297
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS-DKGD 198
L + G +++ G G+ GQ G G +N+ P V E+ G + +++ LA + G
Sbjct: 298 LFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVL-ELMGTEVSQITCGRHHTLAFAPSSGV 356
Query: 199 VFGWGNSEYGQISESEM 215
V+ +G + +GQ+ E+
Sbjct: 357 VYAFGGNSHGQLGTGEL 373
>gi|340721977|ref|XP_003399389.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 2
[Bombus terrestris]
Length = 506
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
++IT ++ + G+N+ G G G D ++ + L G+ I G+ H L
Sbjct: 13 LIITRDKIVYALGSNTSGCLGTG-----DACNTFYPKKVEALCGKNIKTFAYGKGPHVLA 67
Query: 140 LTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LTE GKVYS WG + LG+ + N P V + E IV ++ LA++++G
Sbjct: 68 LTEEGKVYS--WGHNSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGK 125
Query: 199 VFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
V+ WG + GQ+ +S + +TP ++ ++ ++ G S+ + D G VY WG
Sbjct: 126 VYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGCN 185
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G V++ + P + + +E ++ G A++N G LY+WG
Sbjct: 186 DVGQLGIGNYVNQ-VDPCEVTTL------------IEKIVCGYAHVLALSNKGALYVWGG 232
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
N YGQLGLG + P+++
Sbjct: 233 NNYGQLGLGMKMNMCNPVQL 252
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-----ADLE 123
IK A G+ H + +T+ +++G+NS G+ G H I +L
Sbjct: 54 IKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTN----------HMIPMPVTKNLN 103
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
E I+D CG H+L LT GKVY+ G GQ G N+ TP V + G+ ++ +
Sbjct: 104 DEFIVDIACGSHHSLALTNEGKVYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICI 163
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S + V+D G V+GWG ++ GQ+ + + C+ + I + G +
Sbjct: 164 SCGQSSSMTVTDTGKVYGWGCNDVGQLGIG----NYVNQVDPCEVTTLIEKIVCGYAHVL 219
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQ 281
L+++G +Y WG YG LG G K++ P + + G+
Sbjct: 220 ALSNKGALYVWGGNNYGQLGLGMKMNMC-NPVQLKQEMMGR 259
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAV 193
+ L +T VY+ G G G G N P V + G+ I + VLA+
Sbjct: 10 NEALIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEA-LCGKNIKTFAYGKGPHVLAL 68
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+++G V+ WG++ +G++ P +++ IVD+A G L +EG VY+
Sbjct: 69 TEEGKVYSWGHNSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYA 128
Query: 254 WGYGLLGQ-GPKVS-RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
WG GQ G V+ P + STL G+ V + G + +T+ G +Y
Sbjct: 129 WGENTCGQVGKSVNINENTPMKVNSTLAGK-------TVICISCGQSSSMTVTDTGKVYG 181
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
WG N GQLG+G +Q P +V +K
Sbjct: 182 WGCNDVGQLGIGNYVNQVDPCEVTTLIEK 210
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I DIACG ++ T K++ G N+ Q+G + P+++ +
Sbjct: 107 IVDIACGSHHSLALTNEG----KVYAWGENTCGQVGKSVNINENTPMKVNSTL------- 155
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ++ G++ ++ +TD + +G N GQ G G +Y + + L
Sbjct: 156 --AGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIG-----NYVNQVDPCEVTTLI 208
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
EKI VCG H L L+ G +Y G GQ GLG N P ++ E+ G +
Sbjct: 209 -EKI---VCGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNMCNPVQLKQEMMGRVLDVA 264
Query: 184 SSAVDCV-LAVSDKGDVFGWG 203
+S + + +A+++ +F WG
Sbjct: 265 TSHYNHISIAMAEGNRIFMWG 285
>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 450
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 133/314 (42%), Gaps = 35/314 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG P +L F + S IK + G H++V+TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQL-SDFCK--------SGCIKSVTGGGGHSVVVTDG 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
G F G N GQ G G E+ C L G I CG D T+ LTE G+V
Sbjct: 68 GGLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLLGCPIRQVACGWDFTIMLTEKGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG A GQ G+ H + C+V IE E++V +++ + LA +D G F WG
Sbjct: 123 LSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGT 179
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------LNDEGLVYSWGY 256
+ P L+ K SR+ + S C + L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQNLPLFLTA-KEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGR 238
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
GQ ++ T +P + + KV ++ +G A T G ++ WG+
Sbjct: 239 NKHGQLASLA-----TFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRAD 293
Query: 317 YGQLG--LGTVEDQ 328
YGQLG LG+ E Q
Sbjct: 294 YGQLGRTLGSPEAQ 307
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ ++ CG N+ QLG H PRK +P
Sbjct: 103 IRQVACGWDFTIMLTEKG----QVLSCGSNAFGQLGVPHGPRK-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + TD F +G GR + ++ + +
Sbjct: 148 IECLREKVVCVAAGLRHALATTDTGSTFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE---IE 176
LE ++ AV G DH+ LT++G++Y WG + L L P R E +
Sbjct: 207 TGLESSTVVCAVAGSDHSASLTDTGELYV--WGRNKHGQLASLAT-FLPLPQRVEAHYFQ 263
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
E++ + S ++A ++ G VF WG ++YGQ+ +
Sbjct: 264 DEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRT 300
>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G NS QLG+ D + P + P+K + ++ +A G HT VIT + F
Sbjct: 1 GANSYGQLGHGDVEDRSAPRLCDTA------PLKDGAVRV--VAGGGGHTAVITGDGEVF 52
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
G N GQ G G + D C ++ + + CG D TLFLT+SG+V SCG
Sbjct: 53 VCGQNHRGQLGLGHL--ADISALQRCPSLT----HTVTNVTCGWDFTLFLTDSGRVLSCG 106
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
A GQ G+G N V ++ +V +++ + LAV+D G V+ WG Q
Sbjct: 107 SNAFGQLGIGQKPNFTAEVQVVESLKAA-VVSVAAGLRHALAVTDSGRVYQWGRGLLSQA 165
Query: 211 SESEMQISTP-----RVLSQCKGVSRIVD--VASGGSACTMLNDEGLVYSWGYGLLGQGP 263
+ S P V S G+ + V +G C L ++G ++ WG GQ
Sbjct: 166 KRTLGPSSVPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQ-- 223
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
VSR + S + + +V + +G A T G ++ WG+ YGQLG
Sbjct: 224 LVSRD---PFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLG 278
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 112/295 (37%), Gaps = 38/295 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T++ CG+ FT+ T S ++ CG N+ QLG +++V S
Sbjct: 83 VTNVTCGWDFTLFLTDSG----RVLSCGSNAFGQLGIGQKPNFTAEVQVVESL------- 131
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR--GIVQEEDYQGKWFCHNIAD 121
+ +A G H + +TD+ + +G Q R G + G +
Sbjct: 132 ---KAAVVSVAAGLRHALAVTDSGRVYQWGRGLLSQAKRTLGPSSVPPHLGSTVPSPVPG 188
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ + G H + LTE G ++ G GQ + R + GER+
Sbjct: 189 LDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQLVSRDPFLSSAMPVKRSLLGGERVG 248
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG--- 238
+ S ++A ++ G VF WG YGQ+ +P S G + + +
Sbjct: 249 GVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPAPTSRSPESRSTTDGANLEAGLPAEVKA 308
Query: 239 ---------GSACTMLNDEGLVYSWGY---GLLGQG-------PKVSRSMKPTLI 274
GS + G + SWG+ G+ G G P++ +++P LI
Sbjct: 309 LQGATQIACGSEHNLAILAGRLLSWGWNEHGMCGDGSHTDVRQPQLVPALRPLLI 363
>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Sarcophilus harrisii]
Length = 612
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 32/271 (11%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A RA T++++ +G NS+GQ G G +ED ++ D + K++ G
Sbjct: 183 APARAVTLLLS-------WGANSYGQLGLG--HKEDVLEPQRLNDFCDPKRLKLLTG--G 231
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSSAVDCVL 191
H+ +T+ G+++ CG DGQ GLGH + + PC + G ++++S D +
Sbjct: 232 GGHSAVVTDEGELFVCGLNKDGQLGLGHTEDVLSFIPCT---PLAGCPVLQVSCGWDFTI 288
Query: 192 AVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+++ G V G++ +GQ+ ++ Q+ P+V+ ++V +A+G +
Sbjct: 289 LLTENGQVLSCGSNSFGQLGLPPGTKRQV-IPQVIELLN--EKVVCIAAGMRHALAATES 345
Query: 249 GLVYSWGYGLLGQGPKV--SRSMKPTLI---PSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
GLV+ WG GL G + +++ P L P + G SKV++++AG C ++
Sbjct: 346 GLVFQWGTGLASTGRRTCPEKTLPPFLTAKEPCQVTGLE----NSKVKTVVAGSCHSASL 401
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ G LY+WG N++GQL L P P K+
Sbjct: 402 TDEGELYVWGSNKHGQL-LSPAAFLPTPQKI 431
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++K L G H+ V+TD F G N GQ G G ED C +A G ++
Sbjct: 224 RLKLLTGGGGHSAVVTDEGELFVCGLNKDGQLGLG--HTEDVLSFIPCTPLA---GCPVL 278
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAV 187
CG D T+ LTE+G+V SCG + GQ GL Q P ++ E+ E++V +++ +
Sbjct: 279 QVSCGWDFTILLTENGQVLSCGSNSFGQLGLPPGTKRQVIPQVI--ELLNEKVVCIAAGM 336
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-----QCKGV--SRIVDVASGGS 240
LA ++ G VF WG + + + P L+ Q G+ S++ V +G
Sbjct: 337 RHALAATESGLVFQWGTGLASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSC 396
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPT-LIPSTLFGQHQFNPKSKVESLIAGPCT 299
L DEG +Y WG GQ + P +P+ + KV + +G
Sbjct: 397 HSASLTDEGELYVWGSNKHGQ------LLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTH 450
Query: 300 FGAITNFGHLYMWGKNQYGQLG 321
A T G ++ WG+ YGQLG
Sbjct: 451 LVARTETGKVFTWGRADYGQLG 472
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 48/323 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF CGLN D QLG E V+SF+ P Q+ + G TI++T+
Sbjct: 243 ELFVCGLNKDGQLGLGH-------TEDVLSFIPCTPLAGCPVLQV---SCGWDFTILLTE 292
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
N + G+NSFGQ G + + +L EK++ G H L TESG
Sbjct: 293 NGQVLSCGSNSFGQLGL-----PPGTKRQVIPQVIELLNEKVVCIAAGMRHALAATESGL 347
Query: 146 VYSCGWGADG-------QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
V+ G G + L + PC V G +E ++ + + +++D+G+
Sbjct: 348 VFQWGTGLASTGRRTCPEKTLPPFLTAKEPCQVTG-LENSKVKTVVAGSCHSASLTDEGE 406
Query: 199 VFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
++ WG++++GQ+ + TP ++ + C ++ V SG + + G V++WG
Sbjct: 407 LYVWGSNKHGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRA 466
Query: 258 LLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL------- 309
GQ G KV + T G H+ S +L P + + +
Sbjct: 467 DYGQLGTKVDGQERCT-------GDHELL-LSCTRTLATMPSSLPCLEGVTEMACGSEHN 518
Query: 310 --------YMWGKNQYGQLGLGT 324
Y WG N++G G GT
Sbjct: 519 LAVVGSSCYSWGWNEHGMCGDGT 541
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 58/305 (19%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++CG+ FT++ T+ N ++ CG NS QLG K+ IP +
Sbjct: 277 VLQVSCGWDFTILLTE----NGQVLSCGSNSFGQLGLPPGTKR----------QVIPQVI 322
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNI 119
+ + ++ +A G H + T++ F +G GR E+ K C +
Sbjct: 323 ELLNEKVVCIAAGMRHALAATESGLVFQWGTG-LASTGRRTCPEKTLPPFLTAKEPCQ-V 380
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGE 178
LE K+ V G H+ LT+ G++Y G GQ L TP + + E
Sbjct: 381 TGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQL-LSPAAFLPTPQKIEAHCFQNE 439
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-----------SESEMQISTPRVLSQ-- 225
++ + S ++A ++ G VF WG ++YGQ+ + E+ +S R L+
Sbjct: 440 KVTMVWSGWTHLVARTETGKVFTWGRADYGQLGTKVDGQERCTGDHELLLSCTRTLATMP 499
Query: 226 -----CKGVSRIV-----DVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSM-KP 271
+GV+ + ++A GS+C YSWG+ G+ G G +V+ + KP
Sbjct: 500 SSLPCLEGVTEMACGSEHNLAVVGSSC---------YSWGWNEHGMCGDGTEVNVWVPKP 550
Query: 272 TLIPS 276
PS
Sbjct: 551 VESPS 555
>gi|358055243|dbj|GAA98751.1| hypothetical protein E5Q_05439 [Mixia osmundae IAM 14324]
Length = 1310
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 33/289 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNL-KLFGCGLNSDSQLG--YHDPRKKGNPLELVMSFVR 58
I+I +A G T++A +S + + ++F G N QLG Y+ N LV F
Sbjct: 888 IEIISLASGMSHTLIAYRSTNTGVERIFAVGRNESGQLGIGYNSQETTRN---LVEGF-- 942
Query: 59 IPLPVKHPSTQIKHLAT-GRAHTIVITDN----EGAFTFGNNSFGQCG---RGIVQEEDY 110
+I ++AT G + + V+ +N G F G++S GQ G + +E D
Sbjct: 943 -------QGDRILNVATLGLSGSFVLVENASGRNGLFAMGSSSRGQLGIPRKADSKERDD 995
Query: 111 Q---GKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
Q D++G I+ G +H L LT+ G+VY G DGQ G G L++ +
Sbjct: 996 QLLSRATLVPRPQDMQGS-IISIAAGLEHFLALTDQGEVYGSGINTDGQIGSG-LSDSDV 1053
Query: 168 PCLVRGEI-EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLS 224
L R ++ +GE+ + + D L ++ +G V+ WGNSEY Q +I TP +S
Sbjct: 1054 TVLTRIQLPKGEQPEHIRAGADTSLIITSQGSVWSWGNSEYAQALHGRKIDRIGTPTEVS 1113
Query: 225 -QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPT 272
+ + D+ GGS +L+D G VY+ GYG + G ++ ++ PT
Sbjct: 1114 LNFLSGAGVQDIQLGGSHAVLLDDRGQVYTAGYGAIAHGAEL-QAHSPT 1161
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 126 KIMDAVCGQDHTLFL---TESG--KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+I+ G HTL T +G ++++ G GQ G+G+ + + T LV G +G+RI
Sbjct: 889 EIISLASGMSHTLIAYRSTNTGVERIFAVGRNESGQLGIGYNSQETTRNLVEG-FQGDRI 947
Query: 181 VK-----LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKGVSR- 231
+ LS + V S + +F G+S GQ+ S R +LS+ V R
Sbjct: 948 LNVATLGLSGSFVLVENASGRNGLFAMGSSSRGQLGIPRKADSKERDDQLLSRATLVPRP 1007
Query: 232 ------IVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQF 284
I+ +A+G L D+G VY G GQ G +S S T+ + Q
Sbjct: 1008 QDMQGSIISIAAGLEHFLALTDQGEVYGSGINTDGQIGSGLSDS------DVTVLTRIQL 1061
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ E + AG T IT+ G ++ WG ++Y Q
Sbjct: 1062 PKGEQPEHIRAGADTSLIITSQGSVWSWGNSEYAQ 1096
>gi|283132458|dbj|BAI63631.1| myosin3 [Tetrahymena thermophila]
Length = 1875
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 47/275 (17%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G HT+ +++N +T+G N FGQ G EE + + +NI+ ++ +I
Sbjct: 1397 LQAIYIGETHTVAVSNNNQLYTWGWNDFGQLG---TPEEISENELKINNISMIDQIQIEQ 1453
Query: 130 AVCGQDHTLFLTESGKVYSCGWGAD--GQTGL----GHLNNQETPCLVRGEIEGERIVKL 183
A G D TL L++ GK++ GWG + GQ G G + N + P + ++ ++I +
Sbjct: 1454 ASVGNDFTLILSKEGKLF--GWGKNNKGQLGFYDDEGLIKNVDIPMEII-SVKEDKIKGI 1510
Query: 184 SSAVDCVLAVSDKGDVF-GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ + + G V+ S Y +I+ S+ ++ V+ G +
Sbjct: 1511 KCRMNSAYIILNNGSVYTNQKYSPYQKINFSQ----------------KVERVSCGFNFT 1554
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L +YS+G +G LG G V R +PTLIP F +Q N +VE C
Sbjct: 1555 VFLTTSHQIYSYGKNQHGQLGLGDFVQRK-EPTLIP--FFKTNQIN---QVE------CG 1602
Query: 300 FGAI---TNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
F + TN+G +Y+WG Q GQLGLG +DQ P
Sbjct: 1603 FAHVVCQTNYGRVYVWGWGQCGQLGLGDYQDQQEP 1637
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 41/259 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRI-- 59
I+I + G FT++ +K KLFG G N+ QLG++D +++ M + +
Sbjct: 1449 IQIEQASVGNDFTLILSKEG----KLFGWGKNNKGQLGFYDDEGLIKNVDIPMEIISVKE 1504
Query: 60 -----------------------------PLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
P + S +++ ++ G T+ +T + +
Sbjct: 1505 DKIKGIKCRMNSAYIILNNGSVYTNQKYSPYQKINFSQKVERVSCGFNFTVFLTTSHQIY 1564
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
++G N GQ G G D+ + I + +I CG H + T G+VY G
Sbjct: 1565 SYGKNQHGQLGLG-----DFVQRKEPTLIPFFKTNQINQVECGFAHVVCQTNYGRVYVWG 1619
Query: 151 WGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG GQ GLG +Q+ P L + + ++++ + L + + D+ +G ++ +
Sbjct: 1620 WGQCGQLGLGDYQDQQEPQLCNLNNLYKDIVIQVCATRTSTLLLLNNSDILWFGTNQSIK 1679
Query: 210 ISESEMQISTPRVLSQCKG 228
E+ L Q +G
Sbjct: 1680 YQENPTIYKVSEKLKQLEG 1698
>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1294
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 37/284 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IK ++CG T+ + N +++G G S QLG + P +V
Sbjct: 112 IKCLSLSCGQSHTIAVMQ----NGEVYGWGDGSYGQLGNGSQESRFAPTRIVSE------ 161
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + + G HTI++ + A+ G+N GQ G + E + I
Sbjct: 162 -----NNEFIQVQCGSRHTILLDLKKKAYVCGSNENGQLGLRSTKIELF--------IKK 208
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ + ++A CGQ H+L L E G+VYS G + GQ G+G NNQ + +EGE+IV
Sbjct: 209 LDNKGFIEAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQI-NSLEGEQIV 267
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
K+++ A++ KG+++ WG +G + P +++ + D++ G
Sbjct: 268 KIAAGSHSA-ALNKKGEMYIWGTGVFG-------EYLFPNKINRHSSGTTFSDISVGNFF 319
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQH 282
++ G V++WG G LGQG +++ TL L G+H
Sbjct: 320 AAAVDINGAVWTWGANSNGELGQGDYEPKTLPQTL--QALKGRH 361
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/300 (24%), Positives = 117/300 (39%), Gaps = 46/300 (15%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I+ ++ G H+ IT +T G+N G+ G + DL K +
Sbjct: 60 IRTVSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKSITSSSTPCL---VEDLSKIKCLS 116
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CGQ HT+ + ++G+VY G G+ GQ G G ++ P R E +++
Sbjct: 117 LSCGQSHTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAP--TRIVSENNEFIQVQCGSRH 174
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+ + K + G++E GQ+ +I KG ++ A G +L+++G
Sbjct: 175 TILLDLKKKAYVCGSNENGQLGLRSTKIELFIKKLDNKG---FIEAACGQFHSLLLDEQG 231
Query: 250 LVYSWG---YGLLGQGPKVSR-------SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
VYS G +G LG G K ++ S++ I G H K E I G
Sbjct: 232 RVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAGSHSAALNKKGEMYIWGTGV 291
Query: 300 FG--------------------AITNF--------GHLYMWGKNQYGQLGLGTVEDQPFP 331
FG ++ NF G ++ WG N G+LG G E + P
Sbjct: 292 FGEYLFPNKINRHSSGTTFSDISVGNFFAAAVDINGAVWTWGANSNGELGQGDYEPKTLP 351
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 68/306 (22%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
+L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+
Sbjct: 39 YLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKTTINKPTC--VKALKPEKVKYVA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G DGQ GLG + T + +I +LS+ +
Sbjct: 94 CGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-------QISTPRVLS-------------------- 224
A+++ G++F WG++ GQI + Q++ + +S
Sbjct: 154 ALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWISCGYYHSAFVTMDGELYT 213
Query: 225 --QCKG------------------VSRI----VDVASGGSACTMLNDEGLVYSWG---YG 257
+C+ V+RI + VA GG +L E +VY++G +G
Sbjct: 214 FGECENGKLGLPEELLINHKTPQLVTRIPEKVIQVACGGGHTVVLT-ETIVYTFGLGQFG 272
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G + + +P I ++ K+ S+ G IT G +Y +G +Y
Sbjct: 273 QLGLGTFIFETSEPKAI--------EYIKDHKISSISCGENHTALITELGRMYTFGDGRY 324
Query: 318 GQLGLG 323
G+LGLG
Sbjct: 325 GKLGLG 330
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P EL+++ + P V
Sbjct: 192 ISWISCGYYHSAFVTM--DGELYTFGECENG----------KLGLPEELLINH-KTPQLV 238
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ +TFG FGQ G G E + K I ++
Sbjct: 239 TRIPEKVIQVACGGGHTVVLTET-IVYTFGLGQFGQLGLGTFIFETSEPKA----IEYIK 293
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
KI CG++HT +TE G++Y+ G G G+ GLG + NQ P L
Sbjct: 294 DHKISSISCGENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTL 342
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I+ P + K ++ VA G +
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKP-EKVKYVACGRNH 98
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLF-GQHQFNPKSKVESLIAGP 297
+ +EG VY+ G G LG G R+ T P + F QH K++ L AG
Sbjct: 99 TLVSTEEGNVYATGGNNDGQLGLGDTEGRN---TFYPISFFTSQH------KIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 150 NTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIG 189
>gi|428164909|gb|EKX33919.1| hypothetical protein GUITHDRAFT_166344 [Guillardia theta CCMP2712]
Length = 784
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 17/229 (7%)
Query: 56 FVRIPLPVKHPSTQIKH---LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
F +P+ + S Q H LA G H I + D +++GNN GQ G G + +
Sbjct: 204 FRSVPMLIN--SIQDLHFLELAAGDFHVIALNDLGEVWSWGNNVEGQLGVGDLSQRSQPA 261
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
K + ++G + G H+L LT+ G+VYS G A+GQ GLG ++++ P L++
Sbjct: 262 K-----VVYMDGLNTVKVAAGSYHSLVLTDFGQVYSMGLNANGQLGLGDYSSRKAPTLIK 316
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGV-S 230
+ + I ++ A+SD G+VF WG++ +GQ+ +S + + P ++ K +
Sbjct: 317 -YLATKNISSIACGDYASYAISDAGEVFAWGDNSFGQLGQSAAVTYNEPSLIPSLKNDGA 375
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
+ V G +++ G+VY++G YG+LG G K +R PT I S
Sbjct: 376 NVYKVFGGQRTIFAIDESGIVYAFGNNDYGMLGLGDKTTRKF-PTKISS 423
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I ++ ++ G H + L + G+V+S G +GQ G+G L+ + P V ++G
Sbjct: 211 INSIQDLHFLELAAGDFHVIALNDLGEVWSWGNNVEGQLGVGDLSQRSQPAKVV-YMDGL 269
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
VK+++ L ++D G V+ G + GQ+ + L + I +A G
Sbjct: 270 NTVKVAAGSYHSLVLTDFGQVYSMGLNANGQLGLGDYSSRKAPTLIKYLATKNISSIACG 329
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A ++D G V++WG +G LGQ V+ + +P+LIPS N + V +
Sbjct: 330 DYASYAISDAGEVFAWGDNSFGQLGQSAAVTYN-EPSLIPSLK------NDGANVYKVFG 382
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G T AI G +Y +G N YG LGLG + FP K++
Sbjct: 383 GQRTIFAIDESGIVYAFGNNDYGMLGLGDKTTRKFPTKIS 422
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 15/169 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVIT 84
+++ GLN++ QLG D + + P +K+ +T+ I +A G + I+
Sbjct: 289 QVYSMGLNANGQLGLGDYSSR-----------KAPTLIKYLATKNISSIACGDYASYAIS 337
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
D F +G+NSFGQ G+ Y ++ + +G + GQ + ESG
Sbjct: 338 DAGEVFAWGDNSFGQLGQSAAVT--YNEPSLIPSLKN-DGANVYKVFGGQRTIFAIDESG 394
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
VY+ G G GLG ++ P + + V S A + A
Sbjct: 395 IVYAFGNNDYGMLGLGDKTTRKFPTKISSFVGANVYVIASGAYHTIAAT 443
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 116/309 (37%), Gaps = 72/309 (23%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD--LEGEKIMDAVCGQDHTLF 139
V+ N+ + G N +GQ G G E + + D L ++ G H++
Sbjct: 23 VVAAND-VYVVGYNDWGQLGLGDYLERTTE------TLIDSKLPLDRTYGLAAGLYHSVA 75
Query: 140 LTES----GKVYSCGWGADGQTGLG----HLNNQE--------------TPCLVRGEIEG 177
L ++ G VY+ G + GQ GLG L+ Q P L + +
Sbjct: 76 LGDTSSTQGLVYTWGRNSKGQLGLGPIWTSLSPQAVQWKACPEPNSWVCNPSLCKPVCDA 135
Query: 178 ERIVKLSSAVDC--VLAVSDKGDV-------FGWGNSEYGQISESEMQISTPRVLSQCKG 228
+ SA VL V D+ WG++ QI ++ + + VL++ +
Sbjct: 136 SKCTSYGSANSYWKVLGVDKASDMQCMKPQDVVWGSASQPQIVQTVASVDSTFVLTKQEM 195
Query: 229 VSR--------------------IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKV 265
++R +++A+G LND G V+SWG G LG G
Sbjct: 196 LARPDGKYFRSVPMLINSIQDLHFLELAAGDFHVIALNDLGEVWSWGNNVEGQLGVGDLS 255
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
RS P+ + N + AG +T+FG +Y G N GQLGLG
Sbjct: 256 QRSQ-----PAKVVYMDGLN----TVKVAAGSYHSLVLTDFGQVYSMGLNANGQLGLGDY 306
Query: 326 EDQPFPLKV 334
+ P +
Sbjct: 307 SSRKAPTLI 315
>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
Length = 1384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 32/302 (10%)
Query: 53 VMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
M+ I LP K T+I+ +A G H IVIT FT+G S GQ G G ++
Sbjct: 529 TMALTPIMLPSK---TKIRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLES----- 580
Query: 113 KWFCHN---IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
CH + L+G+ I+ A CG++ +LF +++G + +CG G G G G + P
Sbjct: 581 ---CHVPSLVEGLKGKSIIQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPR 637
Query: 170 LVRGEIEGE------RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRV 222
L+ + + +V ++ V V + +VF WG + G++ SE P+
Sbjct: 638 LIEALLRDQLSLYSVDVVSVACGSHHVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQE 697
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-----LGQGPKVSRSMKPTLIPST 277
++ +S I + G +L D G + + G L +MK +
Sbjct: 698 VTVPDNLS-IKECHCGRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTE 756
Query: 278 LFGQHQFNP-----KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
+ + F P + +V + GP + GH+Y +GKN GQLG G ++Q P+
Sbjct: 757 VAEEKIFTPVRELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPI 816
Query: 333 KV 334
+V
Sbjct: 817 QV 818
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
V+ ++ + VF WG GQ+ ++ P ++ KG S I+ G +D
Sbjct: 553 VIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKS-IIQARCGEEFSLFASDN 611
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G++ + G G LG G S S +P LI + L Q V S+ G + +
Sbjct: 612 GIIMTCGDGTAGCLGHGDWCSTS-RPRLIEALLRDQLSLY-SVDVVSVACGSHHVCVVGS 669
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ WG+ + G+LGLG+ +D P +V V
Sbjct: 670 ESEVFTWGRGKNGRLGLGSEQDFCQPQEVTV 700
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 27/184 (14%)
Query: 2 IKITDIACG-YGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ + +ACG + VV ++S+ +F G + +LG + P E V +P
Sbjct: 652 VDVVSVACGSHHVCVVGSESE-----VFTWGRGKNGRLGLGSEQDFCQPQE-----VTVP 701
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-----------RGIVQEED 109
+ IK GR T+++TD GNN + G + I + +
Sbjct: 702 -----DNLSIKECHCGRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTE 756
Query: 110 YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
+ + +L +++D G H+ + E G VY+ G + GQ G G+ Q+ P
Sbjct: 757 VAEEKIFTPVRELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPI 816
Query: 170 LVRG 173
V+
Sbjct: 817 QVKA 820
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I IT ++ F FG N G G D Q + L G+KI G
Sbjct: 35 TSANEAIYITHSDEVFVFGLNCSNCLGTG-----DNQSTIVPKKLEALCGKKISSLSYGS 89
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + TE G+VY+ G Q G G N TP V + +++V+++ +A+
Sbjct: 90 GPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMAL 149
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S GD++ WG + GQ+ S S TPR +S C +V +A G ++ + + G VY
Sbjct: 150 SMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVY 209
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V + G A+T+ G L
Sbjct: 210 GWGYNGNGQLGLGNNGNQ-----LTPCRVAALHSVC----VLQIACGYAHTLALTDEGLL 260
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G +Q P+++ + ++
Sbjct: 261 YAWGANTYGQLGTGNKSNQLSPVQIMMEKER 291
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + + ++F GLN + LG D + P +L +
Sbjct: 30 ACVFGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGK--------- 80
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G H ++ T++ + +G+N + Q G G QG +L +K
Sbjct: 81 -KISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN----QGITPVQVCTNLLIKK 135
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L+ G +Y+ G+ GQ G G NQ TP V ++G+ +V ++
Sbjct: 136 VVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACG 195
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV + G+V+GWG + GQ + + Q++ RV S C ++ +A G +
Sbjct: 196 QTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC-----VLQIACGYAH 250
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--G 296
L DEGL+Y+WG YG LG G K S + P I K +V + A
Sbjct: 251 TLALTDEGLLYAWGANTYGQLGTGNK-SNQLSPVQI---------MMEKERVVEIAACHS 300
Query: 297 PCTFGAITNFGHLYMWGK 314
T A T G +YMWG+
Sbjct: 301 AHTSAAKTQSGQVYMWGQ 318
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T +K +A G HT+ + + T+G N +GQ G ++ ++ ++ L
Sbjct: 739 TGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLG-----DDSTTTRYSPVQVSTLTNWTA 793
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ A G++H+L L G V++ G+ GQ G G ++Q TP V+ ++ G +V +++
Sbjct: 794 VSA--GENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVK-DLTG--VVAIAAGK 848
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
D LA+ G V+ WG + YG++ S+ V Q ++ + +A+G L
Sbjct: 849 DFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPV--QVALLTDVKAIAAGDYHGVALKK 906
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WGY G LG +S+S T + S + G ++ + AGP A+
Sbjct: 907 DGSVFAWGYNGNGELGNSSTISQS---TPVQSGVTG---------IKGIAAGPYHTLALK 954
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N YGQLG G + P +
Sbjct: 955 SDGTVWSWGYNGYGQLGSGNNTSRSVPAAI 984
Score = 81.3 bits (199), Expect = 7e-13, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
HT+ I + + +G N GQ G G GK + +L G K++ G++HT+
Sbjct: 700 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGK-----VINLTGMKMIAG--GENHTV 752
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L G +++ G+ GQ G + +P V + S+ + LA+ G
Sbjct: 753 ALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV---SAGENHSLALKSDGT 809
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
V+ +G + YGQ+ + S+ R Q K ++ +V +A+G L +G V+SWG
Sbjct: 810 VWAFGYNGYGQLGDG--TTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNT 867
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
YG LG G +RS P Q + V+++ AG A+ G ++ WG N
Sbjct: 868 YGELGNG-TTTRSSVPV----------QVALLTDVKAIAAGDYHGVALKKDGSVFAWGYN 916
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
G+LG + Q P++ V G K
Sbjct: 917 GNGELGNSSTISQSTPVQSGVTGIK 941
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
+HT+F+ G V+ G+ GQ G G N+ P V + G +++ + + +A+
Sbjct: 699 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVI-NLTGMKMI--AGGENHTVALR 755
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G + WG + YGQ+ + V Q ++ V++G + L +G V+++
Sbjct: 756 SDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSAGENHSLALKSDGTVWAF 813
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
GY GQ + S + T + Q + V ++ AG A+ + G ++ WG+
Sbjct: 814 GYNGYGQLGDGTTSSQRTPV--------QVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQ 865
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N YG+LG GT P++VA+
Sbjct: 866 NTYGELGNGTTTRSSVPVQVAL 887
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ +F G N + +LG S + PV+ T IK +A G HT+
Sbjct: 906 KDGSVFAWGYNGNGELGNS-------------STISQSTPVQSGVTGIKGIAAGPYHTLA 952
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLT 141
+ + +++G N +GQ G G A + G M ++ G++ ++
Sbjct: 953 LKSDGTVWSWGYNGYGQLGSGNNTSRSVP--------AAIPGLASMASIAAGENQSIAYG 1004
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
G +YS G A+GQ G G + P V G
Sbjct: 1005 NDGILYSWGRNANGQLGNGTTVDTNVPHKVIG 1036
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 50 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSTVNKPTC--VKALKPEKVKFAAC 104
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + + + L+ +I +LS+ + A
Sbjct: 105 GRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAA 164
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI + + P+ ++ K +S I + G + EG +
Sbjct: 165 LTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGEL 221
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK---VESLIAGPCTFG--AI 303
Y++G G LG +P L H+ P+S E ++ C G +
Sbjct: 222 YTFGEPESGKLG-------------LPKQLLVNHRM-PQSVPGIPEKVVQVACGGGHTVV 267
Query: 304 TNFGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 268 LTEKAVYTFGLGQFGQLGLGT 288
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 144/322 (44%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + V+ P K
Sbjct: 50 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSTVNKP-----TCVKALKPEK-- 98
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G E + H I+ +
Sbjct: 99 ---VKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNS-----FHLISFFTSQR 150
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +S
Sbjct: 151 KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNV---CVPQQVTVGKPISWISC 207
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ +G+++ +G E G++ + + R+ G+ ++V VA GG +
Sbjct: 208 GYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVV 267
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L E VY++G +G LG G + + P +I + K+ S+ G
Sbjct: 268 LT-EKAVYTFGLGQFGQLGLGTFLFETPVPKVI--------EHIKDLKISSIFCGENHTA 318
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 319 LITDLGLMYTFGDGRHGKLGLG 340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T + L+ G +LG P +L+++ R+P V
Sbjct: 202 ISWISCGYYHSAFVTTEGE----LYTFGEPESGKLGL--------PKQLLVNH-RMPQSV 248
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + +TFG FGQ G G E K H I DL
Sbjct: 249 PGIPEKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETPVPKVIEH-IKDL- 305
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
KI CG++HT +T+ G +Y+ G G G+ GLG + NQ TP L
Sbjct: 306 --KISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTL 352
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 92/251 (36%), Gaps = 75/251 (29%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
FTFG F E+ K WF ++I CG +HT +T + K+
Sbjct: 23 AVFTFGKTKFA---------ENIPSKFWFKNDIPAF-------LSCGDEHTAIVTGNNKL 66
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y G GQ GLG + P V+ ++ E++ + + L ++ G V+
Sbjct: 67 YMFGSNNWGQLGLGSKSTVNKPTCVKA-LKPEKVKFAACGRNHTLVSTEGGKVY------ 119
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
ASGG N+EG LG G
Sbjct: 120 -----------------------------ASGG------NNEGQ--------LGLGDTDE 136
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
R+ + F + K++ L AG T A+T G L+MWG N GQ+GL +
Sbjct: 137 RN--------SFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNIT 188
Query: 327 DQPFPLKVAVG 337
+ P +V VG
Sbjct: 189 NVCVPQQVTVG 199
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 48/352 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IACG T+ T+S +++ GLN+ QLG D ++ F P+ V+ P
Sbjct: 135 IACGGAHTLFLTESG----RVYATGLNNFGQLGISDEKR----------FSTEPVEVRIP 180
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ H++ G H+ V+T + + +G NS GQ G G ++ + + L+G
Sbjct: 181 KEAM-HISAGYNHSCVVTADGELYMWGVNSNGQLGLG---KKSAKAVHLPTKVDSLDGIV 236
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN---------NQETPCLVRGEIEG 177
I A G DH++ + + G+V+S G G G+ G GH + ++ TP L++ E+EG
Sbjct: 237 IKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIK-ELEG 295
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVA 236
++ +++ + V + G V+ +G ++S E + +TP ++S +VA
Sbjct: 296 IKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE---EVA 352
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE-- 291
GG +L G +YSWG G LG G S + +P + G +P SKV
Sbjct: 353 CGGYHTCVLTKGGDLYSWGSNENGCLGNG-----STSVSHLPERVEGPFSKSPVSKVSCG 407
Query: 292 ----SLIAGPC--TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ I+G T+G + G + G + GQLG G+ D P K+ +G
Sbjct: 408 WKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLG 459
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 31/289 (10%)
Query: 60 PLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+P + +K +A G AHT+ +T++ + G N+FGQ GI E+ + +
Sbjct: 121 PVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFGQL--GISDEKRFSTEPVEVR 178
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEG 177
I ++ M G +H+ +T G++Y G ++GQ GLG + + + ++G
Sbjct: 179 IP----KEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDG 234
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI----------STPRVLSQCK 227
I + + D +AV+D G+VF WG+ G++ TPR++ + +
Sbjct: 235 IVIKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELE 294
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGP--KVSRSMKPTLIPSTLFGQHQFN 285
G+ ++ VA+G +++ G VY +G + + +++ P+LI + L
Sbjct: 295 GI-KVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTLL------- 346
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
E + G +T G LY WG N+ G LG G+ P +V
Sbjct: 347 ---DCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERV 392
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 84/329 (25%), Positives = 141/329 (42%), Gaps = 37/329 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I DIACG T + N ++ G N+ QLG ++ ++
Sbjct: 68 VVIEDIACGEEHTSFIAQ----NGYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLK--- 120
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + QI + G HT + DN FT+G N GQ G G I D
Sbjct: 121 --GYKAVQI---SCGAYHTATVCDNGQLFTWGQNCEGQLGIG------KSDNMTTPQIVD 169
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ + CG+ +T+ +T++ K++ G G GQ GLG+ N+ P + +I+ + IV
Sbjct: 170 LKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKCGQLGLGNECNEYKPRQL--QIQMQNIV 227
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGG 239
+S L ++++G+ F GN+ Y Q+ + + + P + Q + + +A+
Sbjct: 228 AISCGDRHTLFLNEEGEAFSCGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANT 287
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L+ EG +Y WG G GQ + +R +F PK ++ I G
Sbjct: 288 PMSAALSSEGYLYLWGTGFFGQFDRPTRC--------------EFAPKDLLDICI-GNQF 332
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
+ G +Y WG N +G+LG G Q
Sbjct: 333 ICLLDGEGKVYSWGSNMFGELGQGIANGQ 361
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S I+ +A G HT I N ++ GNN+ GQ G + +E Y K + L+G K
Sbjct: 67 SVVIEDIACGEEHTSFIAQNGYVYSMGNNNQGQLGVSV--DESYY-KSAPTLVEGLKGYK 123
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ CG HT + ++G++++ G +GQ G+G +N TP +V +++ V +S
Sbjct: 124 AVQISCGAYHTATVCDNGQLFTWGQNCEGQLGIGKSDNMTTPQIV--DLKNNLAVFVSCG 181
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+ ++ +FG+G+ + GQ+ +E PR L + IV ++ G L
Sbjct: 182 KRNTMVITQTQKIFGFGDGKCGQLGLGNECNEYKPRQLQ--IQMQNIVAISCGDRHTLFL 239
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
N+EG +S G Y LG S P + Q + V+ + A A
Sbjct: 240 NEEGEAFSCGNNTYNQLGCANNSQSSNIPVKV-------KQKSTLKFVKVIAANTPMSAA 292
Query: 303 ITNFGHLYMWGKNQYGQL 320
+++ G+LY+WG +GQ
Sbjct: 293 LSSEGYLYLWGTGFFGQF 310
Score = 44.7 bits (104), Expect = 0.057, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS----TPRVLSQCKGVSRIV-DVASGGSACTMLND 247
+ D V+ WG+ YGQ+ + + +PR S S ++ D+A G + +
Sbjct: 30 LKDFTPVYVWGSDTYGQLGLASREFGKSCPSPRFTS----FSVVIEDIACGEEHTSFIAQ 85
Query: 248 EGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G VYS G GQ G V S + P+ + G + K + G + +
Sbjct: 86 NGYVYSMGNNNQGQLGVSVDESYYKS-APTLVEGLKGY----KAVQISCGAYHTATVCDN 140
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP 331
G L+ WG+N GQLG+G ++ P
Sbjct: 141 GQLFTWGQNCEGQLGIGKSDNMTTP 165
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 86/225 (38%), Gaps = 33/225 (14%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M I I+CG T+ + + F CG N+ +QLG + + N IP
Sbjct: 223 MQNIVAISCGDRHTLFLNEEGEA----FSCGNNTYNQLGCANNSQSSN----------IP 268
Query: 61 LPVKHPSTQ--IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+ VK ST +K +A + ++ + +G FGQ R E
Sbjct: 269 VKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQFDRPTRCE----------- 317
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIE 176
+ ++D G L GKVYS G G+ G G N Q+ P V +I+
Sbjct: 318 ---FAPKDLLDICIGNQFICLLDGEGKVYSWGSNMFGELGQGIANGQQALEPIQV-DKIK 373
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
+ + +L + V A+ + S Y +S+ IS+ R
Sbjct: 374 DKNVKRLYCGANFVFAMGENWIHQQQEASSYENSKQSKNVISSKR 418
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 143/315 (45%), Gaps = 31/315 (9%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + P V+S P I + G HT +++E
Sbjct: 38 GRGEDGQLGHGDAEDRLVPT--VLSGFDAP--------AITSVICGADHTTAYSEDELQV 87
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + + L+G KI CG H L +T +G+V S
Sbjct: 88 YSWGWGDFGRLGHG-----NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSW 142
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ E + +++ + AV++ GD++GWG YG
Sbjct: 143 GRNQNGQLGLGTTEDSLLPQKIQA-FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 201
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S +G ++V VA G ++D G +Y++G YG LG G
Sbjct: 202 LGLGDRNDRLLPEKVSSVEG-EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG--- 257
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P + + S + + G A+T+ G LY WG N++GQ+G+G
Sbjct: 258 --DFEDHLVPHKV----EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNN 311
Query: 326 EDQPFPLKVAVGGQK 340
+D P +V+ G +
Sbjct: 312 DDHSSPGQVSFPGSE 326
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + ++ G +H++ + ++G GQ G G D + + ++ +
Sbjct: 11 PPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHG-----DAEDRLVPTVLSGFDAP 65
Query: 126 KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
I +CG DHT +E +VYS GWG G+ G G+ ++ TP V+ ++G +I +++
Sbjct: 66 AITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA-LQGLKIKQIA 124
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACT 243
LAV+ G+V WG ++ GQ+ + S P+ + + V + +A+G
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVC-VKMIAAGAEHTA 183
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ ++G +Y WG YG LG G + R L+P + + E ++ C +
Sbjct: 184 AVTEDGDLYGWGWGRYGNLGLGDRNDR-----LLPEKV-------SSVEGEKMVLVACGW 231
Query: 301 G---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G+LY +G ++YGQLG G ED P KV
Sbjct: 232 RHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKV 268
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI IACG + T + + + G N + QLG P + + +F
Sbjct: 118 LKIKQIACGDSHCLAVTMAGE----VQSWGRNQNGQLGLGTTEDSLLP-QKIQAF----- 167
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +K +A G HT +T++ + +G +G G G D + ++
Sbjct: 168 ----ESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG-----DRNDRLLPEKVSS 218
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EGEK++ CG HT+ +++SG +Y+ GW GQ G G + P V ++ I
Sbjct: 219 VEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTIS 277
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
++S +A++ +G ++GWG +++GQ+
Sbjct: 278 QISGGWRHTMALTSEGKLYGWGWNKFGQV 306
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G H++ L + S G G DGQ G G ++ P ++ G + I + D
Sbjct: 20 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSG-FDAPAITSVICGADHTT 78
Query: 192 AVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A S D+ V+ WG ++G++ + + TP+ + +G+ +I +A G S C + G
Sbjct: 79 AYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLAVTMAG 137
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V SWG G LG G + + +L+P + Q V+ + AG A+T
Sbjct: 138 EVQSWGRNQNGQLGLG-----TTEDSLLPQKI----QAFESVCVKMIAAGAEHTAAVTED 188
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WG +YG LGLG D+ P KV +V G+K
Sbjct: 189 GDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 223
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IA G T T+ D L+G G LG D + LP K
Sbjct: 175 IAAGAEHTAAVTEDGD----LYGWGWGRYGNLGLGDRNDR-------------LLPEKVS 217
Query: 67 STQIKHL---ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S + + + A G HTI ++D+ +T+G + +GQ G G D++ H + L+
Sbjct: 218 SVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG-----DFEDHLVPHKVEALK 272
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
I G HT+ LT GK+Y GW GQ G+G+ ++ +P
Sbjct: 273 DSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSP 317
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 36/308 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLA--TGRAHTIV 82
KL+ CG ++ +LG V P P+ S IK +A +G H +
Sbjct: 2947 KLYACGEGTNGRLGLGHSNN-----------VPYPRPIPFLSQYVIKKVAVHSGGKHAMA 2995
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G G D I L +KI D CG H+ +T
Sbjct: 2996 LTLDGKVFSWGEGEDGKLGHGNRLNLDKPKM-----IEALRSKKIRDIACGSSHSAAITS 3050
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P L++ + G RIV+++ S LA++D+G VF
Sbjct: 3051 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLV-GHRIVQVACGSRDAQTLALTDEGWVF 3109
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
WG+ ++G++ + + P + + + +V + G L G V++WG Y
Sbjct: 3110 SWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGEVWTWGKGDY 3168
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G KPT+I S KV + G A+T+ G +Y WG N
Sbjct: 3169 FRLGHGSD-QHVRKPTVIESL--------KDKKVIHVAVGALHCLAVTDTGQVYAWGDND 3219
Query: 317 YGQLGLGT 324
+GQ G GT
Sbjct: 3220 HGQQGNGT 3227
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 45/290 (15%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEG 124
IK +A +G H + ++ + +++G G+ G G + C I L+G
Sbjct: 3957 IKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHG--------NRLACETPKLIEALQG 4008
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I+D CG H+ +T +G++Y+ G G G+ G G +Q P L+ E+ G +++ ++
Sbjct: 4009 YEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIE-ELVGYKVIDVA 4067
Query: 185 --SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSA 241
S L ++D +V+ WG+ +YG++ P+ + G+ ++ V G
Sbjct: 4068 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VIKVECGSQF 4126
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK-------SKVE 291
L G VY+WG Y LG G G+H PK K+
Sbjct: 4127 SVALTRSGSVYTWGKGDYHRLGHGT----------------GEHVRRPKKVAALQGKKII 4170
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
S+ G A ++ G ++ WG N GQLG T P L A+ G+K
Sbjct: 4171 SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKK 4220
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 16/245 (6%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + +T + +++GN G+ G G D K I L+G+ I+D CG ++
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHG-----DTSTKEEPTLIQALKGKDIIDVECGGTYSA 580
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDK 196
++ +G +Y+ G G G+ G G + TP ++ + E I+K++ S L ++ +
Sbjct: 581 AISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA-LSDEHIIKVACGSFYAHTLCITSQ 639
Query: 197 GDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+ WG+ +YG++ S PR++ + + V +IV V G L+++G VY+WG
Sbjct: 640 GKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWG 698
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G+G K+ PT + KV + G A+T+ G +Y WGKN
Sbjct: 699 K---GEGWKLGH---PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKN 752
Query: 316 QYGQL 320
+ Q+
Sbjct: 753 ENKQI 757
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI DIACG + T S + L+ GL +LG+ D + P +L+ S V
Sbjct: 3034 KIRDIACGSSHSAAITSSGE----LYTWGLGEYGRLGHGDNITQLKP-KLIKSLV----- 3083
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I +A G A T+ +TD F++G+ FG+ GRG +G HNI
Sbjct: 3084 ----GHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG-----GSEGCNIPHNIE 3134
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L +++ CG +L LT++G+V++ WG LGH ++Q P ++ ++ +
Sbjct: 3135 RLNALEVVQIECGAQFSLALTKTGEVWT--WGKGDYFRLGHGSDQHVRKPTVIES-LKDK 3191
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
+++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3192 KVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3222
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ + GK+Y+CG G +G+ GLGH NN + P L + I+ V + S
Sbjct: 2932 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKK---VAVHS 2988
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A++ G VF WG E G++ + + + P+++ + +I D+A G S
Sbjct: 2989 GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRDIACGSSHSAA 3047
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G +++ +KP LI S L G ++ + G
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHGDNITQ-LKPKLIKS-LVGH-------RIVQVACGSRDAQ 3098
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3099 TLALTDEGWVFSWGDGDFGKLGRGGSE 3125
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AHT+ IT +++G+ +G+ GRG G I L+ KI+ CG +
Sbjct: 631 AHTLCITSQGKVYSWGDGDYGKLGRG-----GSDGSKLPRLIEKLQNVKIVQVYCGAQFS 685
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
+ L+E G VY+ G G + G N P +V + ++V +S V VLA++D+G
Sbjct: 686 VALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGVSHVLALTDQG 744
Query: 198 DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+V+GWG +E QI + SE+ + PR++ KG ++V V G + D+
Sbjct: 745 EVYGWGKNENKQICDSSELFVQQPRLIEALKG-QKVVGVCCGPAQSFAWTDDN 796
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +A G AH+ IT +T+G +G+ G G D + + I +L G K++
Sbjct: 4010 EIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHG-----DSEDQLKPKLIEELVGYKVI 4064
Query: 129 DAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D C G TL +T+ V+S G G G+ G G + + P + + G ++K+
Sbjct: 4065 DVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES-LAGLGVIKVECG 4123
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ + + P+ ++ +G +I+ +A+G C
Sbjct: 4124 SQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQG-KKIISIATGSLHCVAC 4182
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFN 285
+DEG V++WG GQ G + +++ + S L G+ N
Sbjct: 4183 SDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITN 4223
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 36/257 (14%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVC 132
G ++ I+ N +T+G ++G+ G G ++ C I+ L E I+ C
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAED--------CLTPTMISALSDEHIIKVAC 626
Query: 133 GQ--DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G HTL +T GKVYS G G G+ G G + + P L+ +++ +IV++
Sbjct: 627 GSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFS 685
Query: 191 LAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+A+S+ G V+ WG E ++ +E + P ++ + ++V V+ G S L D+G
Sbjct: 686 VALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRD-RKVVGVSLGVSHVLALTDQG 744
Query: 250 LVYSWGYG----------LLGQGPKVSRSMKPTLI------PSTLFG---QHQFNPKSKV 290
VY WG L Q P++ ++K + P+ F ++ PK+ V
Sbjct: 745 EVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNERTPKTAV 804
Query: 291 ESLI-AGPCTFGAITNF 306
+I G TF I N
Sbjct: 805 PFVIDLGEQTFKLIENL 821
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ +VYS G G G+ G G + +E P L++ ++G+ I+ + A+S
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISA 584
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG--SACTMLNDEGLVY 252
G ++ WG YG++ + TP ++S I+ VA G + + +G VY
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSD-EHIIKVACGSFYAHTLCITSQGKVY 643
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G + P LI K+ + G A++ GH+
Sbjct: 644 SWGDGDYGKLGRGGSDGSKL-PRLIEKL--------QNVKIVQVYCGAQFSVALSEDGHV 694
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WGK + +LG T E+ FP V V
Sbjct: 695 YTWGKGEGWKLGHPTEENVRFPEMVEV 721
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 40/225 (17%)
Query: 121 DLEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQ-----TGLGHLNNQETPCLVRGE 174
D E + +C D T L LT++GKV+ + +D Q TGL +N + +
Sbjct: 466 DTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQCPQEMTGLSGINMIK----IAAH 521
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
EG+ LA++ +V+ WGN + G++ + L Q I+D
Sbjct: 522 PEGKH----------YLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIID 571
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
V GG+ ++ G +Y+WG YG LG G + PT+I S L +H
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHG-TAEDCLTPTMI-SALSDEH--------- 620
Query: 292 SLIAGPC-TFGA----ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+I C +F A IT+ G +Y WG YG+LG G + P
Sbjct: 621 -IIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLP 664
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAV 187
+ G + TLF +T GKVY+ G+GA G+ G+G ++ P L+ + ++I S
Sbjct: 3908 LVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGK 3967
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C LA+S DV+ WG + G++ + + TP+++ +G I+D+A GG+ +
Sbjct: 3968 HC-LALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGGAHSAAIT 4025
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G +Y+WG YG LG G + +KP LI L G + +G I
Sbjct: 4026 STGQLYTWGKGRYGRLGHGDSEDQ-LKPKLI-EELVGYKVIDVACG-----SGDAQTLCI 4078
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ +++ WG YG+LG G + P K+
Sbjct: 4079 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKI 4109
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDC 189
+D TL SG +Y GWG + + LG + + TPC + R V+L
Sbjct: 3860 EDWTLSWGGSGTIY--GWGHNHRGQLGGIEGAKVKIPTPCEALSTL---RPVQLVGGEQT 3914
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLND 247
+ AV+ G V+ G G++ + P +L + V + + V SGG C L+
Sbjct: 3915 LFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA 3974
Query: 248 EGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ VYSWG G LG G +++ P LI + L G ++ + G AIT
Sbjct: 3975 DNDVYSWGEGDDGKLGHGNRLA-CETPKLIEA-LQGY-------EIIDIACGGAHSAAIT 4025
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G LY WGK +YG+LG G EDQ P
Sbjct: 4026 STGQLYTWGKGRYGRLGHGDSEDQLKP 4052
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 220 PRVLSQCKGVSRI-VDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIP 275
P+ ++ G++ I + G L + VYSWG G LG G S +PTLI
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHG-DTSTKEEPTLIQ 562
Query: 276 STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ L G+ + + G AI+ G LY WG+ YG+LG GT ED P ++
Sbjct: 563 A-LKGKDIIDVE-------CGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMIS 614
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +ATG H + +D FT+G+N GQ G ++ ++ L+G+KI
Sbjct: 4168 KIISIATGSLHCVACSDEGEVFTWGDNDEGQLG-----DDTTNAIQRPRLVSALQGKKIT 4222
Query: 129 DAVCGQDHTLFLTESGKVYSCG 150
+ CG HTL + + +C
Sbjct: 4223 NVACGSAHTLAWSTNNASSACA 4244
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D K +E + I
Sbjct: 4062 KVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVI--- 4118
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ G ++ +T + +T+G + + G G + K +A L
Sbjct: 4119 ---------KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK-----VAAL 4164
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+KI+ G H + ++ G+V++ G +GQ G N + P LV ++G++I
Sbjct: 4165 QGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSA-LQGKKITN 4223
Query: 183 LSSAVDCVLAVS 194
++ LA S
Sbjct: 4224 VACGSAHTLAWS 4235
>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
Length = 1074
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 42/277 (15%)
Query: 3 KITDIACGYGFTVVATK-SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
K+ + CG FT K S ++ +F G N + QLG + S I
Sbjct: 176 KVESVECGSNFTFSIVKDSNNQEQSIFAWGCNREGQLG-------------LSSLAEIDF 222
Query: 62 PVKHP-----STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
P K + +IK ++ G +H++ +T+ + G+NS GQ G G + Q
Sbjct: 223 PTKLKFFEDYNIRIKQISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPII-- 280
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-LGHLNNQETPCLVRGEI 175
I L + I+ G H+LFLT +G+VY CG Q G + NQ TP + +
Sbjct: 281 --IDTLVDKVIIQISAGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITA-L 337
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQCKGVSRIV 233
+ +IVK+ + + A+S+ G++F WG +G + + IS P +
Sbjct: 338 QNYKIVKIEAKQESA-AISNAGELFLWGKGVFGSYRTPQKILTISNP-----------VC 385
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSR 267
D++ G S T L+ +GL+++WG +G LG G + R
Sbjct: 386 DISLGRSLGTALDSKGLLWTWGTNEHGELGVGDQDPR 422
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 47/353 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD--PRKKGNPLELVMSFVRI 59
I I I+CG + + T L+ G NS QLG D P + V
Sbjct: 116 ILIKQISCGDNHSAILTNQG----HLYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVD- 170
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDN-----EGAFTFGNNSFGQCGRGIVQEEDYQGK- 113
K +++ + G T I + + F +G N GQ G + E D+ K
Sbjct: 171 ----KLRDYKVESVECGSNFTFSIVKDSNNQEQSIFAWGCNREGQLGLSSLAEIDFPTKL 226
Query: 114 --WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ +NI +I G H+LFLTE +VY+ G + GQ G+G NQ ++
Sbjct: 227 KFFEDYNI------RIKQISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPII 280
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS--TPRVLSQCKGV 229
+ + I+++S+ L ++ G+V+ GN++ Q+ + Q + TP ++ +
Sbjct: 281 IDTLVDKVIIQISAGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNY 340
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+IV + + + + N G ++ WG G+ G R+ + L S NP
Sbjct: 341 -KIVKIEAKQESAAISN-AGELFLWGKGVFGS----YRTPQKILTIS--------NP--- 383
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLKVAVGGQK 340
V + G A+ + G L+ WG N++G+LG+G + + P+P+ + + G+K
Sbjct: 384 VCDISLGRSLGTALDSKGLLWTWGTNEHGELGVGDQDPRIHPYPV-LTLKGKK 435
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 16/275 (5%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S+++ +A GR H +V+ D + +G+N GQ G G Y ++ L G
Sbjct: 1537 SSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLP-IQVDLEPLAGST 1595
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSS 185
+ G H++ L + G+++ G G+ G G Q P LV + G +++ +S+
Sbjct: 1596 VTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSA 1655
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+A+ ++G ++ WG ++ G++ S ++ L+ G ++V +++GG
Sbjct: 1656 GEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDG-HKVVAISAGGWNT 1714
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L++ G +++WG GLLG G +++ + + L G+ KV ++ AG
Sbjct: 1715 VALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGR-------KVVAVSAGSFY 1767
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
F + + G L+ WG N YGQLG GT + P++V
Sbjct: 1768 FFVVDDRGELWAWGSNSYGQLGDGTKTRRLKPVRV 1802
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 140/321 (43%), Gaps = 24/321 (7%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D +++ G N D LG R + P+ ++ P+ + +G + +
Sbjct: 1444 DNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLT------PLGGSTVVSISTGSGASRSQ 1497
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
I D + +G N G G G + + + ++A L K+ G+ H L L
Sbjct: 1498 AIDDQGRLWAWGYNFAGALGDGTGIDRN---RPVLVDLASLGSSKVTAVAAGRYHNLVLD 1554
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAVDCVLAVSDKGD 198
+ ++++ G DGQ G G N P ++ ++E G + + + + + D G
Sbjct: 1555 DQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGR 1614
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWGY 256
++ WG ++YG++ + T VL ++ +++ V++G L+++G +++WG
Sbjct: 1615 LWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGL 1674
Query: 257 ---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G R +P + T H KV ++ AG A+ G L+ WG
Sbjct: 1675 NDSGRLGDGSTTDRH-RPVQVDLTSLDGH------KVVAISAGGWNTVALDELGRLWAWG 1727
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N+ G LG GT +Q P++V
Sbjct: 1728 PNESGLLGDGTTINQHRPVQV 1748
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLS--SAVD 188
G H+L L +++S G+ DG G G ++ P L + G +V +S S
Sbjct: 1435 AGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTGSGAS 1494
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCK-GVSRIVDVASGGSACTMLN 246
A+ D+G ++ WG + G + + + + + P ++ G S++ VA+G +L+
Sbjct: 1495 RSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNLVLD 1554
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKVESLIAGPCTFG 301
D+ +++WG+ G LG G + T + L Q P S V + AG
Sbjct: 1555 DQSRLWAWGHNGDGQLGDGTR-------TNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSI 1607
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G L++WGKN+YG+LG GT Q P+ V
Sbjct: 1608 ILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLV 1640
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK--GVSRIVDVA--SGGSACTMLN 246
L + +K ++ WG + G + + + T VL+ G S +V ++ SG S ++
Sbjct: 1441 LILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTGSGASRSQAID 1500
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
D+G +++WGY G LG G + R+ +P L+ G SKV ++ AG +
Sbjct: 1501 DQGRLWAWGYNFAGALGDGTGIDRN-RPVLVDLASLG------SSKVTAVAAGRYHNLVL 1553
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ L+ WG N GQLG GT + +PL + V
Sbjct: 1554 DDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQV 1586
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 22/281 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+ATG AHT+V+ + FTFG N GQ G G + + I + GE+I
Sbjct: 1144 IATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAA 1203
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H++ ++G +YS G + GQ G G++ P + E++G+ I+K+S +A
Sbjct: 1204 GHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQI-DELKGKPIIKISCGHFHTVA 1262
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQC--KGVSRIV---DVASGGSACTMLN 246
+S+ V+ WG E+ + S +P+++ K + ++V + +A +
Sbjct: 1263 ISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGS 1322
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSM----KPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
D G VY G +G LG G + P +IPS + +G
Sbjct: 1323 DRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSL--------NSMNIVGFSSGSEF 1374
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
ITN G LY WG +GQ+G G ED P K+++ Q+
Sbjct: 1375 SAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKISLNDQR 1415
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 31/286 (10%)
Query: 60 PLP--VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
P+P VK+ + +A G H VI+ + FT+GNNS GQ G G+ YQ
Sbjct: 1023 PMPPLVKNEKKAVS-VACGWEHIAVISSDGELFTWGNNSQGQLGHGL-NVGKYQST--PR 1078
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ + I+ CG +H++ + +S ++YS G GQ G G L Q P + G
Sbjct: 1079 RVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGG 1138
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-------SESEMQISTPRVLSQCKGV- 229
++++ +++ + + GD+F +G ++ GQ+ M+I T S+ G+
Sbjct: 1139 QKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIET----SEIVGIH 1194
Query: 230 -SRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
RI +A+G S M D G +YSWG G LG G + +S++P I L G+
Sbjct: 1195 GERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHG-NIEKSLRPKQI-DELKGK---- 1248
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
P K+ G AI+ +Y WG+ ++ LG G+ +++ P
Sbjct: 1249 PIIKIS---CGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSP 1291
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 19/272 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK LA G HT+ + E + S+G GI+ + + + ++ IA + ++
Sbjct: 33 NIKRLACG-LHTVFALNAEDGKVY---SWGLGKYGILGQGNLRSRFAPLKIASFKSSNVI 88
Query: 129 DAVCGQDHTLFLTE---SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
D C + H +T +G VYS G ++ Q G+G P LV + E I+K++
Sbjct: 89 DISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVT-VLNDENIIKVAC 147
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTM 244
A+S KG++F WG + GQ+ +ST P +L + ++++DVA G +
Sbjct: 148 GKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCI 207
Query: 245 LNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L GLVY++G + GQ P +++ P I FN + S+ G A
Sbjct: 208 LTVGGLVYAFGSNIYGQIAAPSMNKFHLPYRI--------SFNTSKRFVSVSCGSFHSAA 259
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
IT G LY WG G+LGLG + + P +V
Sbjct: 260 ITENGKLYAWGLETDGRLGLGDCKQRSSPTEV 291
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +ACG TV A ++D K++ GL LG + R + PL+ + SF
Sbjct: 34 IKRLACGL-HTVFALNAEDG--KVYSWGLGKYGILGQGNLRSRFAPLK-IASF------- 82
Query: 64 KHPSTQIKHLATGRAHTIVITD--NEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
S+ + ++ H +T N G+ ++FG+NS Q G G E Y +
Sbjct: 83 --KSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVG--DTEPYAEPQL---VT 135
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGER 179
L E I+ CG+ H+ L+ G ++ G G DGQ GLG+ N P ++ GE + +
Sbjct: 136 VLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKV 195
Query: 180 I-VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVAS 237
+ V C+L V G V+ +G++ YGQI+ M + P +S R V V+
Sbjct: 196 MDVACGDLHTCILTVG--GLVYAFGSNIYGQIAAPSMNKFHLPYRIS-FNTSKRFVSVSC 252
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPT 272
G + + G +Y+WG G LG G RS PT
Sbjct: 253 GSFHSAAITENGKLYAWGLETDGRLGLGDCKQRS-SPT 289
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 16/229 (6%)
Query: 119 IADLEGEKIMDAVCGQDHTLFL--TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ L I CG HT+F E GKVYS G G G G G+L ++ P + +
Sbjct: 26 VEALLAYNIKRLACGL-HTVFALNAEDGKVYSWGLGKYGILGQGNLRSRFAPLKI-ASFK 83
Query: 177 GERIVKLSSA---VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
++ +S V +V++ G V+ +G++ Q+ + + L I+
Sbjct: 84 SSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENII 143
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G L+ +G ++ WG G GQ + S +PT++ H K+KV
Sbjct: 144 KVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTIL-------HIGEKKAKVM 196
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+ G +T G +Y +G N YGQ+ ++ P +++ K
Sbjct: 197 DVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHLPYRISFNTSK 245
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 4 ITDIACG-YGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
I +ACG Y ++ K LF GL D QLG + P L
Sbjct: 142 IIKVACGKYHSAALSAKGN-----LFLWGLGDDGQLGLGNYNLSTEP---------TILH 187
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ ++ +A G HT ++T + FG+N +GQ + + I+
Sbjct: 188 IGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQ-----IAAPSMNKFHLPYRISFN 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
++ + CG H+ +TE+GK+Y+ G DG+ GLG + +P E+EG R K
Sbjct: 243 TSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPT----EVEGFRDKK 298
Query: 183 L 183
+
Sbjct: 299 I 299
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV-SDKGDVFGWGN 204
VY+ G G +G G G + +P +V + I +L+ + V A+ ++ G V+ WG
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALL-AYNIKRLACGLHTVFALNAEDGKVYSWGL 59
Query: 205 SEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG---GSACTMLNDEGLVYSWG---YG 257
+YG + + ++ P ++ K S ++D++ +A T + + G VYS+G
Sbjct: 60 GKYGILGQGNLRSRFAPLKIASFKS-SNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNS 118
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G +P P + + N + + G A++ G+L++WG
Sbjct: 119 QLGVG-----DTEPYAEPQLVTVLNDEN----IIKVACGKYHSAALSAKGNLFLWGLGDD 169
Query: 318 GQLGLGTVEDQPFPLKVAVGGQK 340
GQLGLG P + +G +K
Sbjct: 170 GQLGLGNYNLSTEPTILHIGEKK 192
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 142/319 (44%), Gaps = 34/319 (10%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVIT 84
+LF G N LG H P K P PV I A G H + +
Sbjct: 64 RLFTWGWNQRGTLG-HPPETKTE---------SSPAPVDALAGVSIVQAAIGGWHCLAVD 113
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE----GEKIMDAVCGQDHTLFL 140
D A+ +G N +GQCG ++ED + +I + K+ G H++ L
Sbjct: 114 DKGRAYAWGGNEYGQCGEEAERKEDGT-RALRRDIPIPQRCAPKLKVRQVAAGGTHSVVL 172
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T+ G V++ WG G + TP V+G +E +++ + + + LA+++ G ++
Sbjct: 173 TQDGHVWT--WGQPWPP--GDIKQISTPVRVQG-LENVKVIAVGAFHN--LALTEDGILW 225
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WGN+EYGQ+ + Q + + + +VD+A+GG T L EG VY+WG +G
Sbjct: 226 AWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHG 285
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G S M P + L G+ + + G A+T G ++ +G+ +
Sbjct: 286 RLGFGDDKSSHMVPQKV-ELLAGE-------DIIQVSCGGTHSVALTRDGRMFSYGRGDH 337
Query: 318 GQLGLGTVEDQPFPLKVAV 336
G+LG G P++V +
Sbjct: 338 GRLGYGRKVTTGHPMEVPI 356
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +EED+ +A L+ + V G ++L + G++++
Sbjct: 14 LAWGSGEDGQLGMGGYEEEDW-----ARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + +P V + G IV+ + LAV DKG + WG +E
Sbjct: 69 GWNQRGT--LGHPPETKTESSPAPVDA-LAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNE 125
Query: 207 YGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E+E + R L +C ++ VA+GG+ +L +G V++WG
Sbjct: 126 YGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ-- 183
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P +K P + G V+ + G A+T G L+ WG N+YG
Sbjct: 184 ----PWPPGDIKQISTPVRVQGLE------NVKVIAVGAFHNLALTEDGILWAWGNNEYG 233
Query: 319 QLGLGTVEDQPFPLKV 334
QLG G + + P++V
Sbjct: 234 QLGTGDTQPRSQPIRV 249
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
V + G G DGQ G+G ++ RG ++ + + + LA+ G +F WG
Sbjct: 13 VLAWGSGEDGQLGMGGYEEED---WARGVAALDALAVSAVVAGSRNSLAICADGRLFTWG 69
Query: 204 NSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
++ G + E++ + S+P + GVS IV A GG C ++D+G Y+WG G
Sbjct: 70 WNQRGTLGHPPETKTE-SSPAPVDALAGVS-IVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127
Query: 261 Q-GPKVSRSMKPT-LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
Q G + R T + + + PK KV + AG +T GH++ WG+
Sbjct: 128 QCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ 183
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 28/242 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G
Sbjct: 2 LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGT 54
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 206 EYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G + P LI S L + AG +T G ++ WG+N++GQL
Sbjct: 171 LGIDCQKQTSPQLIKSLL--------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 321 GL 322
GL
Sbjct: 223 GL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIK-SLSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
+L G ++ WG GQ
Sbjct: 203 FVLTLSGAIFGWGRNKFGQ 221
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIK-SLLG 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+++++ ++ G +FGWG +++GQ+
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 151 WG--ADGQTGLGHLNNQETPCLVRGEI-EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
WG + GQ GLG ++ + R + +++ + + + V D G V+ G ++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
GQ+ + + +V++ IV VA G + LND+G VY+WG GQ +
Sbjct: 64 GQLGHEKSRKKPEQVVA--LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ-LGLQG 120
Query: 268 SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
S + +P + ++ + G A++ ++ WG+N+YGQLGLG
Sbjct: 121 SEECIRVPRNIKSLSDI----QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH-DPRKKGNPLELVMSFVRIP 60
I+I +ACGY ++ +K+ + +F G N QLG D +K+ +P +L+ S + IP
Sbjct: 137 IQIVQVACGYYHSLALSKASE----VFCWGQNKYGQLGLGIDCQKQTSP-QLIKSLLGIP 191
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
+A G AH+ V+T + F +G N FGQ G
Sbjct: 192 F---------MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
Query: 202 WGNSEYGQISE---SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
WGN+ YGQ+ E + PR S ++ DV G + D+G VY+ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPR-RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LGQ KP + + + ++ G A+ + G +Y WG + G
Sbjct: 63 LGQLGHEKSRKKPEQVVAL--------DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 319 QLGLGTVED 327
QLGL E+
Sbjct: 115 QLGLQGSEE 123
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T +K +A G HT+ + + T+G N +GQ G ++ ++ ++ L
Sbjct: 754 TGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLG-----DDSTTTRYSPVQVSTLTNWTA 808
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ A G++H+L L G V++ G+ GQ G G ++Q TP V+ ++ G +V +++
Sbjct: 809 VSA--GENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVK-DLTG--VVAIAAGK 863
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
D LA+ G V+ WG + YG++ S+ V Q ++ + +A+G L
Sbjct: 864 DFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPV--QVALLTDVKAIAAGDYHGVALKK 921
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WGY G LG +S+S T + S + G ++ + AGP A+
Sbjct: 922 DGSVFAWGYNGNGELGNSSTISQS---TPVQSGVTG---------IKGIAAGPYHTLALK 969
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N YGQLG G + P +
Sbjct: 970 SDGTVWSWGYNGYGQLGNGNNTSRSVPAAI 999
Score = 81.3 bits (199), Expect = 7e-13, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
HT+ I + + +G N GQ G G GK + +L G K++ G++HT+
Sbjct: 715 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGK-----VINLTGMKMIAG--GENHTV 767
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L G +++ G+ GQ G + +P V + S+ + LA+ G
Sbjct: 768 ALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV---SAGENHSLALKSDGT 824
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
V+ +G + YGQ+ + S+ R Q K ++ +V +A+G L +G V+SWG
Sbjct: 825 VWAFGYNGYGQLGDG--TTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNT 882
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
YG LG G +RS P Q + V+++ AG A+ G ++ WG N
Sbjct: 883 YGELGNG-TTTRSSVPV----------QVALLTDVKAIAAGDYHGVALKKDGSVFAWGYN 931
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
G+LG + Q P++ V G K
Sbjct: 932 GNGELGNSSTISQSTPVQSGVTGIK 956
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
+HT+F+ G V+ G+ GQ G G N+ P V + G +++ + + +A+
Sbjct: 714 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVI-NLTGMKMI--AGGENHTVALR 770
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G + WG + YGQ+ + V Q ++ V++G + L +G V+++
Sbjct: 771 SDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSAGENHSLALKSDGTVWAF 828
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
GY GQ + S + T + Q + V ++ AG A+ + G ++ WG+
Sbjct: 829 GYNGYGQLGDGTTSSQRTPV--------QVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQ 880
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N YG+LG GT P++VA+
Sbjct: 881 NTYGELGNGTTTRSSVPVQVAL 902
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ +F G N + +LG S + PV+ T IK +A G HT+
Sbjct: 921 KDGSVFAWGYNGNGELGNS-------------STISQSTPVQSGVTGIKGIAAGPYHTLA 967
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ + +++G N +GQ G G + + I L I G++ ++
Sbjct: 968 LKSDGTVWSWGYNGYGQLGNG-----NNTSRSVPAAIPGL--ASIASIAAGENQSIAYGN 1020
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
G +YS G A+GQ G G + P V G
Sbjct: 1021 DGILYSWGRNANGQLGNGTTVDTNVPHKVIG 1051
>gi|380018674|ref|XP_003693250.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 534
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 23/263 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+++T ++ + G+N+ G G G D + + +L G+ I G+ H L
Sbjct: 36 LIVTKDKMVYAVGSNTSGCLGTG-----DTYNTLYPRRVEELCGKDIKTFAYGKGPHVLA 90
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
LTE GK+YS WG + LG+++ + P LV + E I+ ++ LA++ +G
Sbjct: 91 LTEDGKIYS--WGHNSHCELGNISASQGLIPMLVTKNLCNEFIIDIACGSHHSLALTIEG 148
Query: 198 DVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+ WG + Q+ S + TP ++ R+V ++ G S+ ++ D G +YSWG
Sbjct: 149 RVYAWGENTSRQVGNSVNINEGTPMKVNSTLADKRVVCISCGQSSSMVVTDNGEIYSWGC 208
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G + + P I +TL G +E ++ G A++N G LY+WG
Sbjct: 209 NEVGQLGIGNYANHA-NPCKI-TTLIG-------ITIEKVVCGYAHVLALSNTGILYVWG 259
Query: 314 KNQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG + P+++ V
Sbjct: 260 GNYCGQLGLGMKTNICNPVQLIV 282
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK A G+ H + +T++ +++G+NS C G + QG +L E I+
Sbjct: 77 IKTFAYGKGPHVLALTEDGKIYSWGHNS--HCELGNISAS--QGLIPMLVTKNLCNEFII 132
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
D CG H+L LT G+VY+ G Q G N+ TP V + +R+V +S
Sbjct: 133 DIACGSHHSLALTIEGRVYAWGENTSRQVGNSVNINEGTPMKVNSTLADKRVVCISCGQS 192
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+ V+D G+++ WG +E GQ+ + + P ++ G++ I V G + L++
Sbjct: 193 SSMVVTDNGEIYSWGCNEVGQLGIGNYANHANPCKITTLIGIT-IEKVVCGYAHVLALSN 251
Query: 248 EGLVYSWGYGLLGQ 261
G++Y WG GQ
Sbjct: 252 TGILYVWGGNYCGQ 265
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 58 RIPLPV---KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
+P+PV KH + + +A G HT+V+T+++ +++G G+ G D K+
Sbjct: 28 EMPMPVEGLKHLT--VVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHA-----DNHWKY 80
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
H ++ L G+ I CG HT ++++G +++ G G G+ G G+ PC V
Sbjct: 81 VPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAF 140
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRI 232
I G + +++ A+ G+V+ WG+ E G I E+ P+ L KGV +I
Sbjct: 141 I-GREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGV-KI 198
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A+ G + +G ++SWG +G LGQG + K + P + G +
Sbjct: 199 TQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNE-----KNQVTPCCVEGLQGV----R 249
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V+ + G +T G + +G ++GQLG G ++ P V
Sbjct: 250 VKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLV 294
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 138/322 (42%), Gaps = 59/322 (18%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + IACG G TVV T+ KD ++ G D +LG+ D K P LV + +
Sbjct: 39 LTVVQIACGSGHTVVLTEDKD----VWSWGRGDDGRLGHADNHWKYVP-HLVSALTGKSI 93
Query: 62 ----------------------------------PVKHPS---------TQIKHLATGRA 78
V HP+ +++ +A G
Sbjct: 94 KQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSR 153
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD-AVCGQDHT 137
HT + + +G+ G CG G E Y K + L+G KI A CG HT
Sbjct: 154 HTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPK----KLEALKGVKITQIAACGF-HT 208
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
+T+ G ++S G G G+ G G+ NQ TPC V G ++G R+ +++ V++ G
Sbjct: 209 AAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEG-LQGVRVKQVACGGFHSACVTEDG 267
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
DV +G E+GQ+ + T L + + IV V G S L+++G V+++G
Sbjct: 268 DVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNG 327
Query: 256 -YGLLGQGPKVSRSMKPTLIPS 276
+G LG G ++S P L+ S
Sbjct: 328 DHGKLGHGAN-AKSALPKLVES 348
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 39/256 (15%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G GQCG G +++ + L+ ++ CG HT+ LTE V+S
Sbjct: 9 YSWGRGEDGQCGNGSTNDQEMP-----MPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSW 63
Query: 150 GWGADGQTGLGHLNN--QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G G DG+ LGH +N + P LV + G+ I +++ A+SD G ++ WG Y
Sbjct: 64 GRGDDGR--LGHADNHWKYVPHLVSA-LTGKSIKQVTCGSYHTAAISDTGALWTWGGGMY 120
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVD-VASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
G++ ++ P + R V+ +A G L G VY WG G+ G G
Sbjct: 121 GKLGHGN-EVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGE 179
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA------GPCTF--GAITNFGHLYMWGKN 315
+HQ+ PK K+E+L C F AIT G L+ WG+
Sbjct: 180 AA---------------EHQYLPK-KLEALKGVKITQIAACGFHTAAITQDGALWSWGEG 223
Query: 316 QYGQLGLGTVEDQPFP 331
++G+LG G ++Q P
Sbjct: 224 KFGRLGQGNEKNQVTP 239
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I +A HT IT + +++G FG+ G+G E Q C + L+G ++
Sbjct: 196 VKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQG---NEKNQVTPCC--VEGLQGVRV 250
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG H+ +TE G V + G G GQ G G N+ PCLV+ +EG IV+++
Sbjct: 251 KQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA-LEGAGIVQVTCGW 309
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +S+ G VF +GN ++G++ S L + ++ VAS
Sbjct: 310 SHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVAS 359
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 142/309 (45%), Gaps = 38/309 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRK--KGNPLELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTI 81
KL+ CG ++ +LG D + P+ + +V IK +A +G H +
Sbjct: 2843 KLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYV------------IKKVAVHSGGKHAL 2890
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D I L+ ++I D CG H+ +T
Sbjct: 2891 ALTQDGKVFSWGEGEDGKLGHGNSISLDKP-----RLIESLKSKRIRDIACGSGHSAAIT 2945
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
SG++Y+ G G G+ G G Q P LV+ + G+R+++++ S +A++ G V
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLV-GQRVIQIACGSRDAQTMALTADGLV 3004
Query: 200 FGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
+ WG+ ++G++ TP ++ + G+ +V + G L G V++WG
Sbjct: 3005 YSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTWGKGD 3063
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Y LG G KPTL+ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3064 YFRLGHGND-HHVRKPTLVEG-LRGK-------KIIHVAVGALHCLAVTDIGQVYAWGDN 3114
Query: 316 QYGQLGLGT 324
+GQ G GT
Sbjct: 3115 DHGQQGNGT 3123
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG +N + P L + I+ V + S
Sbjct: 2828 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKK---VAVHS 2884
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + + PR++ K RI D+A G
Sbjct: 2885 GGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKS-KRIRDIACGSGHSAA 2943
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G ++S KP L+ S L GQ +V + G
Sbjct: 2944 ITSSGELYTWGLGEYGRLGHGDTATQS-KPKLVQS-LVGQ-------RVIQIACGSRDAQ 2994
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG +G+LG G
Sbjct: 2995 TMALTADGLVYSWGDGDFGKLGRG 3018
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + T S + L+ GL +LG+ D + P +LV S V
Sbjct: 2930 RIRDIACGSGHSAAITSSGE----LYTWGLGEYGRLGHGDTATQSKP-KLVQSLV----- 2979
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
++ +A G A T+ +T + +++G+ FG+ GRG G C+
Sbjct: 2980 ----GQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG--------GSDGCYTPL 3027
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
I L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3028 LIDRLNGLGVVQIECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-L 3084
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++I+ ++ LAV+D G V+ WG++++GQ
Sbjct: 3085 RGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQ 3118
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I +L
Sbjct: 3866 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKL-----IEEL 3920
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G +Q TP L+ ++ +++
Sbjct: 3921 LGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA-LQDYKVID 3979
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ ++ V G
Sbjct: 3980 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VIKVECGS 4038
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G +Y+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4039 QFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4089
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A T+ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4090 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKK 4134
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 27/260 (10%)
Query: 85 DNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTE 142
D GA + +G+N GQ G ++ + C +++ L ++ G + TLF +T
Sbjct: 3781 DGSGAIYGWGHNHRGQLGG--LEGAKVKLPVLCESLSALRPVQL----TGGEQTLFAVTA 3834
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVF 200
GKVY+ G+GA G+ G+G ++ P L+ + +++ S C LA+S +G V+
Sbjct: 3835 DGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHC-LALSSEGHVY 3893
Query: 201 GWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
WG + G++ + + P+++ + G + IVD+A GG + G +Y+WG Y
Sbjct: 3894 SWGEGDDGKLGHGNRLSYDRPKLIEELLG-TEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI--AGPCTFGAITNFGHLYMWGK 314
G LG G + + P LI + KV + +G +T+ +++ WG
Sbjct: 3953 GRLGHGDSEDQ-LTPKLIEAL--------QDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4003
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
YG+LG G + P+K+
Sbjct: 4004 GDYGKLGRGGSDGCKIPMKI 4023
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 14/227 (6%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+S+ R L + T+I +A G H+ IT +T+G +G+ G G D + +
Sbjct: 3909 LSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG-----DSEDQ 3963
Query: 114 WFCHNIADLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
I L+ K++D C G TL +T+ V+S G G G+ G G + + P +
Sbjct: 3964 LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKI 4023
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVS 230
+ G ++K+ +A++ G ++ WG +Y ++ ++ + PR ++ +G
Sbjct: 4024 ES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-K 4081
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+I+ +A+G C D+G V++WG G LG G S +P L+
Sbjct: 4082 KIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG-TTSALQRPRLV 4127
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 33/211 (15%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ VYS G G G+ G G++ + P L+ +E + I ++ A+S
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVE-KNITFIACGSTYSAALSS 571
Query: 196 KGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG---SACTMLNDEGL 250
G+++ WG YG++ S+ + P +++ G +V VA GG + G+
Sbjct: 572 NGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNG-HMVVYVACGGGRDPQTLCVTASGI 630
Query: 251 VYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
V+SWG +G LG+G PK+ + + GQ QF+
Sbjct: 631 VFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQ-QFS--------------- 674
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +G +Y WGK + +LG G + +P
Sbjct: 675 AALTAYGEVYTWGKGEDYKLGHGNEDHVRYP 705
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--IAD 121
+ P T I + G H + +T + +++GN G+ G G W+ I
Sbjct: 499 EKPITMIASHSDG-THYLALTQDNSVYSWGNGECGRLGHG-------NMTWYDEPKLIEA 550
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIEGE 178
L + I CG ++ L+ +G++Y+ G G G+ LGH N+ + P LV + G
Sbjct: 551 LVEKNITFIACGSTYSAALSSNGELYTWGRGNYGK--LGHGNSDKDVMIPTLVTA-LNGH 607
Query: 179 RIVKLSSAVDC-------VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVS 230
+V V C L V+ G VF WG+ +G++ S TP+++ + ++
Sbjct: 608 MVV----YVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDIN 663
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ V G L G VY+WG G LG G + P +I
Sbjct: 664 -VAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE-DHVRYPKII--------DILKT 713
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL--GLGTVEDQP 329
K++ L G A+T +Y WG+N +GQ+ LGT+ +P
Sbjct: 714 KKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPEP 757
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + V E+ + + V ++ + VS +G ++ G G+
Sbjct: 2795 WGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGR 2854
Query: 210 ISE-SEMQISTPR---VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQG 262
+ + + P+ LSQ V + V V SGG L +G V+SWG G LG G
Sbjct: 2855 LGLGDDSNVCEPKPIPFLSQY--VIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHG 2912
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+S KP LI S ++ + G AIT+ G LY WG +YG+LG
Sbjct: 2913 NSISLD-KPRLIESL--------KSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGH 2963
Query: 323 GTVEDQPFP-LKVAVGGQK 340
G Q P L ++ GQ+
Sbjct: 2964 GDTATQSKPKLVQSLVGQR 2982
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 81/205 (39%), Gaps = 30/205 (14%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I C + + L+ +G VY +G++ Q G E P I ++S
Sbjct: 463 IKQLCCTERAVIILSVNGNVYMMYYGSETQRVYGF---SEKP-----------ITMIASH 508
Query: 187 VDCV--LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
D LA++ V+ WGN E G++ M L + I +A G +
Sbjct: 509 SDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAA 568
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG---PC 298
L+ G +Y+WG YG LG G M PTL+ + N V G P
Sbjct: 569 LSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTA-------LNGHMVVYVACGGGRDPQ 621
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
T +T G ++ WG +G+LG G
Sbjct: 622 TL-CVTASGIVFSWGDGNHGKLGRG 645
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
D +L+ G ++GWG++ GQ+ E ++ P VL + R V + G +
Sbjct: 3775 DWMLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAVT 3833
Query: 247 DEGLVYSWGYGLLGQGPK--VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G VY+ GYG +G+ M PTL+ S QH F K V S G A++
Sbjct: 3834 ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESI---QHVFVKKVAVNS---GGKHCLALS 3887
Query: 305 NFGHLYMWGKNQYGQLGLG 323
+ GH+Y WG+ G+LG G
Sbjct: 3888 SEGHVYSWGEGDDGKLGHG 3906
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT IACG ++ + N +L+ G + +LG+ + K V IP V
Sbjct: 556 ITFIACGSTYSAALSS----NGELYTWGRGNYGKLGHGNSDKD----------VMIPTLV 601
Query: 64 KHPS-TQIKHLATG---RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ + ++A G T+ +T + F++G+ + G+ GRG + + +
Sbjct: 602 TALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGC--DGSKTPKIVDKL 659
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
D+ K+ CGQ + LT G+VY+ G G D + G G+ ++ P ++ ++ ++
Sbjct: 660 LDINVAKVY---CGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKII-DILKTKK 715
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
I L VLA+++ V+GWG +++GQI
Sbjct: 716 IKDLYIGHLHVLALTEDQLVYGWGRNDHGQI 746
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D +IP+
Sbjct: 3976 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKIPMK 4022
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4023 IESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4077
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + T+ G+V++ G +GQ G G + + P LV ++G++I
Sbjct: 4078 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA-LQGKKIT 4136
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4137 RVACGSAHTLAWS 4149
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 36/308 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLA--TGRAHTIV 82
KL+ CG ++ +LG V P P+ S IK +A +G H +
Sbjct: 2108 KLYACGEGTNGRLGLGHSNN-----------VPYPRPIPFLSQYVIKKVAVHSGGKHAMA 2156
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G G D I L +KI D CG H+ +T
Sbjct: 2157 LTLDGKVFSWGEGEDGKLGHGNRLNLDKPKM-----IEALRSKKIRDIACGSSHSAAITS 2211
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P L++ + G RIV+++ S LA++D+G VF
Sbjct: 2212 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLV-GHRIVQVACGSRDAQTLALTDEGWVF 2270
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
WG+ ++G++ + + P + + + +V + G L G V++WG Y
Sbjct: 2271 SWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGEVWTWGKGDY 2329
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G KPT+I S KV + G A+T+ G +Y WG N
Sbjct: 2330 FRLGHGSD-QHVRKPTVIESL--------KDKKVIHVAVGALHCLAVTDTGQVYAWGDND 2380
Query: 317 YGQLGLGT 324
+GQ G GT
Sbjct: 2381 HGQQGNGT 2388
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 45/290 (15%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEG 124
IK +A +G H + ++ + +++G G+ G G + C I L+G
Sbjct: 3118 IKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHG--------NRLACETPKLIEALQG 3169
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+I+D CG H+ +T +G++Y+ G G G+ G G +Q P L+ E+ G +++ ++
Sbjct: 3170 YEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIE-ELVGYKVIDVA 3228
Query: 185 --SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSA 241
S L ++D +V+ WG+ +YG++ P+ + G+ ++ V G
Sbjct: 3229 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VIKVECGSQF 3287
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK-------SKVE 291
L G VY+WG Y LG G G+H PK K+
Sbjct: 3288 SVALTRSGSVYTWGKGDYHRLGHGT----------------GEHVRRPKKVAALQGKKII 3331
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
S+ G A ++ G ++ WG N GQLG T P L A+ G+K
Sbjct: 3332 SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKK 3381
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI DIACG + T S + L+ GL +LG+ D + P +L+ S V
Sbjct: 2195 KIRDIACGSSHSAAITSSGE----LYTWGLGEYGRLGHGDNITQLKP-KLIKSLV----- 2244
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+I +A G A T+ +TD F++G+ FG+ GRG +G HNI
Sbjct: 2245 ----GHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG-----GSEGCNIPHNIE 2295
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L +++ CG +L LT++G+V++ WG LGH ++Q P ++ ++ +
Sbjct: 2296 RLNALEVVQIECGAQFSLALTKTGEVWT--WGKGDYFRLGHGSDQHVRKPTVIES-LKDK 2352
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
+++ ++ LAV+D G V+ WG++++GQ
Sbjct: 2353 KVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 2383
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ + GK+Y+CG G +G+ GLGH NN + P L + I+ V + S
Sbjct: 2093 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKK---VAVHS 2149
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A++ G VF WG E G++ + + + P+++ + +I D+A G S
Sbjct: 2150 GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRDIACGSSHSAA 2208
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G +++ +KP LI S L G ++ + G
Sbjct: 2209 ITSSGELYTWGLGEYGRLGHGDNITQ-LKPKLIKS-LVGH-------RIVQVACGSRDAQ 2259
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2260 TLALTDEGWVFSWGDGDFGKLGRGGSE 2286
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +A G AH+ IT +T+G +G+ G G D + + I +L G K++
Sbjct: 3171 EIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHG-----DSEDQLKPKLIEELVGYKVI 3225
Query: 129 DAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D C G TL +T+ V+S G G G+ G G + + P + + G ++K+
Sbjct: 3226 DVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES-LAGLGVIKVECG 3284
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ + + P+ ++ +G +I+ +A+G C
Sbjct: 3285 SQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQG-KKIISIATGSLHCVAC 3343
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFN 285
+DEG V++WG GQ G + +++ + S L G+ N
Sbjct: 3344 SDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITN 3384
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAV 187
+ G + TLF +T GKVY+ G+GA G+ G+G ++ P L+ + ++I S
Sbjct: 3069 LVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGK 3128
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C LA+S DV+ WG + G++ + + TP+++ +G I+D+A GG+ +
Sbjct: 3129 HC-LALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGGAHSAAIT 3186
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G +Y+WG YG LG G + +KP LI L G + +G I
Sbjct: 3187 STGQLYTWGKGRYGRLGHGDSEDQ-LKPKLI-EELVGYKVIDVACG-----SGDAQTLCI 3239
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ +++ WG YG+LG G + P K+
Sbjct: 3240 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKI 3270
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDC 189
+D TL SG +Y GWG + + LG + + TPC + R V+L
Sbjct: 3021 EDWTLSWGGSGTIY--GWGHNHRGQLGGIEGAKVKIPTPCEALSTL---RPVQLVGGEQT 3075
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLND 247
+ AV+ G V+ G G++ + P +L + V + + V SGG C L+
Sbjct: 3076 LFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA 3135
Query: 248 EGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ VYSWG G LG G +++ P LI + L G ++ + G AIT
Sbjct: 3136 DNDVYSWGEGDDGKLGHGNRLA-CETPKLIEA-LQGY-------EIIDIACGGAHSAAIT 3186
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G LY WGK +YG+LG G EDQ P
Sbjct: 3187 STGQLYTWGKGRYGRLGHGDSEDQLKP 3213
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +ATG H + +D FT+G+N GQ G ++ ++ L+G+KI
Sbjct: 3329 KIISIATGSLHCVACSDEGEVFTWGDNDEGQLG-----DDTTNAIQRPRLVSALQGKKIT 3383
Query: 129 DAVCGQDHTLFLTESGKVYSCG 150
+ CG HTL + + +C
Sbjct: 3384 NVACGSAHTLAWSTNNASSACA 3405
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D K +E + I
Sbjct: 3223 KVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVI--- 3279
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ G ++ +T + +T+G + + G G + K +A L
Sbjct: 3280 ---------KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK-----VAAL 3325
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+KI+ G H + ++ G+V++ G +GQ G N + P LV ++G++I
Sbjct: 3326 QGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSA-LQGKKITN 3384
Query: 183 LSSAVDCVLAVS 194
++ LA S
Sbjct: 3385 VACGSAHTLAWS 3396
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 33/263 (12%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTRNNKLYMFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++H L TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV++ G +F WG + GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 AVTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFG 301
+Y +G G LG +PS L G H+ P+ ++ G T
Sbjct: 211 LYVFGEPENGKLG-------------LPSQLLGNHRTPQLVSEIPEKVIQVARGGEHTVV 257
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
N +Y +G Q+GQLGLGT
Sbjct: 258 LTEN--AVYTFGLGQFGQLGLGT 278
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T+ N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTR----NNKLYMFGSNNWGQLGLGSKSAVSKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR H +V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + +TE G+++ G ++GQ GL ++ N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAAVTEDGRLFMWGKNSEGQIGLKNVPNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIP--EKVIQVARGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
I + G +Y +G +++G+LGLG
Sbjct: 306 HTALIRDIGLMYTFGNSRHGKLGLG 330
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 73/261 (27%)
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
R ++ D+ FTFG + F + G WF +++ + CG +H
Sbjct: 2 REPEELMPDSGAVFTFGKSKFAENNPGKF--------WFKNDVP-------VHLSCGDEH 46
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+ +T + K+Y G GQ GLG + P V+ ++ E++ + + +L ++
Sbjct: 47 SAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKA-LKPEKVKLAACGRNHILVSTEG 105
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
G+V+ A+GG N+EG
Sbjct: 106 GNVY-----------------------------------ATGG------NNEGQ------ 118
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G R+ T F + K++ L AG T A+T G L+MWGKN
Sbjct: 119 --LGLGDTEERN--------TFHVISFFTSEHKIKQLSAGSNTSAAVTEDGRLFMWGKNS 168
Query: 317 YGQLGLGTVEDQPFPLKVAVG 337
GQ+GL V + P +V +G
Sbjct: 169 EGQIGLKNVPNVCVPQQVTIG 189
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G K P V V I P
Sbjct: 141 KIKQLSAGSNTSAAVTEDG----RLFMWGKNSEGQIGL-----KNVPNVCVPQQVTIGKP 191
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V ++ G H+ +T + + FG G+ G +++ I
Sbjct: 192 VSW-------ISCGYYHSAFVTTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ G +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVARGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + + D G ++ +GNS +G++
Sbjct: 300 ISCGENHTALIRDIGLMYTFGNSRHGKL 327
>gi|290987074|ref|XP_002676248.1| predicted protein [Naegleria gruberi]
gi|284089849|gb|EFC43504.1| predicted protein [Naegleria gruberi]
Length = 393
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 33/331 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IA G FT A K +N KL+ G N QLG K P+++ M
Sbjct: 81 VEQIAAG-AFTFYAIK---ENGKLYAWGRNHRGQLGDKTTVTKVRPVDVYMDGAL----- 131
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD-L 122
+ I + G +HT V+T N ++FG+N++GQ G G +Y+ + N+ +
Sbjct: 132 --ANQYIVKVCGGLSHTAVLTSNNSLYSFGDNTYGQLGIGSASSAEYKMEAVAVNLPESF 189
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG----HLNNQETPCLVRGEIEG- 177
GE ++D CG D T LTESGKV++ G GQ G G +L + ++ G
Sbjct: 190 AGEIVVDLKCGDDFTTVLTESGKVFAWGKNDKGQCGTGINSPYLTVPTPIEMAATKVHGF 249
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR-- 231
+IV+++ A+ + G ++ WG ++ GQI + + + P + + ++
Sbjct: 250 NFDTKIVQIAMGNYASYAIDENGKLWAWGANDQGQIGDRTWDEKNRPFSVYRYGALANQT 309
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+V V +G + L G + + G YG LG G VS S +P ++ F
Sbjct: 310 VVRVCAGNGSVLALTSTGNLVAIGDNTYGQLGTGDYVS-SGEPVVVKMKPF------QNE 362
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
++ + G +T G ++ +G N YGQ
Sbjct: 363 TIKDIQCGMFHNLVLTASGKVFAFGGNMYGQ 393
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 16/269 (5%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQ-EEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
++ ++ + +T+G N +G+ G G V + K F DL+G + ++ + T
Sbjct: 34 YSNILLAGDAVYTWGRNDYGEVGDGTVAVHKKVPFKLFSW---DLQGPQDVEQIAAGAFT 90
Query: 138 LF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAVDCVLAVS 194
+ + E+GK+Y+ G GQ G + P V G + + IVK+ + ++
Sbjct: 91 FYAIKENGKLYAWGRNHRGQLGDKTTVTKVRPVDVYMDGALANQYIVKVCGGLSHTAVLT 150
Query: 195 DKGDVFGWGNSEYGQI-----SESEMQISTPRV-LSQCKGVSRIVDVASGGSACTMLNDE 248
++ +G++ YGQ+ S +E ++ V L + +VD+ G T+L +
Sbjct: 151 SNNSLYSFGDNTYGQLGIGSASSAEYKMEAVAVNLPESFAGEIVVDLKCGDDFTTVLTES 210
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V++WG G G G PT I H FN +K+ + G AI
Sbjct: 211 GKVFAWGKNDKGQCGTGINSPYLTVPTPIEMAATKVHGFNFDTKIVQIAMGNYASYAIDE 270
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G L+ WG N GQ+G T +++ P V
Sbjct: 271 NGKLWAWGANDQGQIGDRTWDEKNRPFSV 299
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 27/283 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI----VQEEDYQGKWFCHNIADLEGE 125
++ +A G I +N + +G N GQ G V+ D + L +
Sbjct: 81 VEQIAAGAFTFYAIKENGKLYAWGRNHRGQLGDKTTVTKVRPVD------VYMDGALANQ 134
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-----TPCLVRGEIEGERI 180
I+ G HT LT + +YS G GQ G+G ++ E + GE +
Sbjct: 135 YIVKVCGGLSHTAVLTSNNSLYSFGDNTYGQLGIGSASSAEYKMEAVAVNLPESFAGEIV 194
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQCK-----GVSR 231
V L D +++ G VF WG ++ GQ I+ + + TP ++ K ++
Sbjct: 195 VDLKCGDDFTTVLTESGKVFAWGKNDKGQCGTGINSPYLTVPTPIEMAATKVHGFNFDTK 254
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
IV +A G A +++ G +++WG QG R+ P +++ ++ V
Sbjct: 255 IVQIAMGNYASYAIDENGKLWAWGAN--DQGQIGDRTWDEKNRPFSVY-RYGALANQTVV 311
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ AG + A+T+ G+L G N YGQLG G P+ V
Sbjct: 312 RVCAGNGSVLALTSTGNLVAIGDNTYGQLGTGDYVSSGEPVVV 354
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+WG YG +G G V+ K +P LF P+ VE + AG TF AI G
Sbjct: 44 VYTWGRNDYGEVGDG-TVAVHKK---VPFKLFSWDLQGPQD-VEQIAAGAFTFYAIKENG 98
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
LY WG+N GQLG T + P+ V + G
Sbjct: 99 KLYAWGRNHRGQLGDKTTVTKVRPVDVYMDG 129
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T +K +A G HT+ + + T+G N +GQ G ++ ++ ++ L
Sbjct: 679 TGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLG-----DDSTTTRYSPVQVSTLTNWTA 733
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ A G++H+L L G V++ G+ GQ G G ++Q TP V+ ++ G +V +++
Sbjct: 734 VSA--GENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVK-DLTG--VVAIAAGK 788
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
D LA+ G V+ WG + YG++ S+ V Q ++ + +A+G L
Sbjct: 789 DFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPV--QVALLTDVKAIAAGDYHGVALKK 846
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WGY G LG +S+S T + S + G ++ + AGP A+
Sbjct: 847 DGSVFAWGYNGNGELGNSSTISQS---TPVQSGVTG---------IKGIAAGPYHTLALK 894
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N YGQLG G + P +
Sbjct: 895 SDGTVWSWGYNGYGQLGNGNNTSRSVPAAI 924
Score = 80.9 bits (198), Expect = 8e-13, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
HT+ I + + +G N GQ G G GK + +L G K++ G++HT+
Sbjct: 640 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGK-----VINLTGMKMIAG--GENHTV 692
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
L G +++ G+ GQ G + +P V + S+ + LA+ G
Sbjct: 693 ALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV---SAGENHSLALKSDGT 749
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
V+ +G + YGQ+ + S+ R Q K ++ +V +A+G L +G V+SWG
Sbjct: 750 VWAFGYNGYGQLGDG--TTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQNT 807
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
YG LG G +RS P Q + V+++ AG A+ G ++ WG N
Sbjct: 808 YGELGNG-TTTRSSVPV----------QVALLTDVKAIAAGDYHGVALKKDGSVFAWGYN 856
Query: 316 QYGQLGLGTVEDQPFPLKVAVGGQK 340
G+LG + Q P++ V G K
Sbjct: 857 GNGELGNSSTISQSTPVQSGVTGIK 881
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
+HT+F+ G V+ G+ GQ G G N+ P V + G +++ + + +A+
Sbjct: 639 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVI-NLTGMKMI--AGGENHTVALR 695
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G + WG + YGQ+ + V Q ++ V++G + L +G V+++
Sbjct: 696 SDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSAGENHSLALKSDGTVWAF 753
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
GY GQ + S + T + Q + V ++ AG A+ + G ++ WG+
Sbjct: 754 GYNGYGQLGDGTTSSQRTPV--------QVKDLTGVVAIAAGKDFSLALKSDGTVWSWGQ 805
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N YG+LG GT P++VA+
Sbjct: 806 NTYGELGNGTTTRSSVPVQVAL 827
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ +F G N + +LG S + PV+ T IK +A G HT+
Sbjct: 846 KDGSVFAWGYNGNGELGNS-------------STISQSTPVQSGVTGIKGIAAGPYHTLA 892
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ + +++G N +GQ G G + + I L I G++ ++
Sbjct: 893 LKSDGTVWSWGYNGYGQLGNG-----NNTSRSVPAAIPGL--ASIASIAAGENQSIAYGN 945
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
G +YS G A+GQ G G + P V G
Sbjct: 946 DGILYSWGRNANGQLGNGTTVDTNVPHKVIG 976
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 147/334 (44%), Gaps = 35/334 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG +T+ TK +++ CG N QLG RK+ L+L+ PL
Sbjct: 35 EIEQIACGDNYTIAVTKEG----QVYSCGNNDHGQLGQEKGRKR---LQLISGID--PLA 85
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ A G +HT+V+ + F++G+N GQ G V + + + L
Sbjct: 86 FRKA-------ACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRM----VKTL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H++ LT +G++Y+ G +DGQ GLG E + + I
Sbjct: 135 GTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAF 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSA 241
++ + +S G VF WG + +GQ+ S++Q + P L + SR+ A G
Sbjct: 195 VACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRN-SRVCYAACGEEF 253
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP- 297
L +G V++ G YG LG G K S + ++ L G S V + G
Sbjct: 254 SVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIM--ELMG-------STVTQISCGRR 304
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T + + G +Y WG GQLG ++ P
Sbjct: 305 HTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTP 338
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IACG ++ T N +L+ G NSD QLG K +LV S +P
Sbjct: 139 IVQIACGLKHSIALTN----NGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVP--- 191
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I +A G HTIVI+ + F +G N+FGQ G +Q + + + L
Sbjct: 192 ------IAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQ-----LRTLR 240
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++ A CG++ ++FLT G V++CG G GQ G G+ ++ P + E+ G + ++
Sbjct: 241 NSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIM-ELMGSTVTQI 299
Query: 184 SSAVDCVLA-VSDKGDVFGWGNSEYGQISESEMQIS-TPRVL 223
S LA V +G V+ WG GQ+ Q S TP+V+
Sbjct: 300 SCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 38/259 (14%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-GEKIMDAVCGQDHTLFLTESGKVYS 148
F +G+ G+ G G +++E+ F + E +I CG ++T+ +T+ G+VYS
Sbjct: 2 FCWGSTIHGELGLGGIEDENI----FTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYS 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LG ++ L+ G I+ K + L V++ G +F WG++ G
Sbjct: 58 CGNNDHGQ--LGQEKGRKRLQLISG-IDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEG 114
Query: 209 QISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
Q+ + I PR++ + G IV +A G L + G +Y+WG G LG G
Sbjct: 115 QLGLDRVSATIREPRMV-KTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA--------ITNFGHLYMWGKN 315
+KP L V SL A P F A I+ G ++ WG+N
Sbjct: 174 DTKMELKPKL----------------VHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRN 217
Query: 316 QYGQLGLGTVEDQPFPLKV 334
+GQLGL ++++ P ++
Sbjct: 218 TFGQLGLSDIQNRNVPCQL 236
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I+ +A G +TI +T ++ GNN GQ G+ +G+ I+ ++
Sbjct: 33 ANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQE-------KGRKRLQLISGIDPLA 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSS 185
A CG HTL + E G+++S G +GQ GL ++ P +V+ + + IV+++
Sbjct: 86 FRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKT-LGTKIIVQIAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ +A+++ G+++ WG++ GQ+ S+++M++ P+++ V I VA GG
Sbjct: 145 GLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELK-PKLVHSLAAVP-IAFVACGGYHT 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+++ G V++WG +G LG +R++ L TL S+V G
Sbjct: 203 IVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQL--RTL-------RNSRVCYAACGEEF 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G + P ++
Sbjct: 254 SVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQI 288
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I +ACG T+V +KS +F G N+ QLG D + + P +L +R
Sbjct: 190 VPIAFVACGGYHTIVISKSG----AVFAWGRNTFGQLGLSDIQNRNVPCQL--RTLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++++ + A G ++ +T + G FT G +GQ G G + + I +
Sbjct: 241 -----NSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHG-----NKTSEILPRQIME 290
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL L S G+VY+ G G GQ G N TP +V G
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFG 343
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +ACG T D + ++ GLN QLG HD S V +P
Sbjct: 37 VPLKAVACGGAHTAAV----DDSGTVYTWGLNDKGQLG-HDSED---------SEVGLPG 82
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCH 117
V P ++ L+ G HT+ + ++ ++FG N GQ G G +V+E
Sbjct: 83 EVAMPE-RVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRL------- 134
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE--------TPC 169
+ L+ K++ G +H+L LT G+VYS G A+G+ G G + P
Sbjct: 135 -VKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPR 193
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKG 228
LVR E R+ ++S+ AVS GD F WG ++ Q+ S+ ++ P VL KG
Sbjct: 194 LVR-AFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKG 252
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQG-PKVSRSMKPTLIPSTLFGQHQF 284
+ VA G L G V +WG G+LGQG K + +P+ +P
Sbjct: 253 ST--AAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVPGV------- 303
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWG 313
E + AG A+T G LY WG
Sbjct: 304 ----SAEQIAAGWKHSAAVTGSGKLYTWG 328
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 31/255 (12%)
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
TFGN G CGR + +Y + + L G + CG HT + +SG VY+
Sbjct: 7 TFGN---GDCGR-LGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT-- 60
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LGH +++++ + GE+ ER+V LS+ L V + G V+ +G + GQ
Sbjct: 61 WGLNDKGQLGH-DSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119
Query: 210 IS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPK 264
+ + + + PR++ + +++V VA+G L G VYSWG G LG G
Sbjct: 120 LGLGKDVVLVREPRLVKSLQD-NKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHG-- 176
Query: 265 VSRSMKPTLIPSTLFGQH-QFNPKS-------KVESLIAGPCTFGAITNFGHLYMWGKNQ 316
+ P LFG +F P+ +VE + AG A++ G ++WG +
Sbjct: 177 -------SATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGK 229
Query: 317 YGQLGLGTVEDQPFP 331
+ QLG G+ ED P
Sbjct: 230 FHQLGFGSDEDLAGP 244
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE---- 125
+K +A G AHT + D+ +T+G N GQ G ED + L GE
Sbjct: 39 LKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGH---DSEDSE--------VGLPGEVAMP 87
Query: 126 -KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKL 183
+++ G HTL + ESG V+S G GQ GLG + P LV+ ++ ++V +
Sbjct: 88 ERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVK-SLQDNKVVAV 146
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL--SQCKGVSRIV-------- 233
++ ++ LA++ G+V+ WGN+ G++ +TPR L S + + R+V
Sbjct: 147 AAGMEHSLALTAGGEVYSWGNAANGRLGHGS---ATPRRLFGSSIEFLPRLVRAFEALRV 203
Query: 234 -DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMK-PTLIPSTLFGQHQFNPKSKV 290
V++G ++ G + WGYG Q G + PT++P K
Sbjct: 204 EQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPL---------KGST 254
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
++ G A+ GH+ WG NQ G LG G + Q
Sbjct: 255 AAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQ 292
>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
Length = 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 32/292 (10%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
E S + P VK S +K + G T+ + ++ + FG N GQ G G +
Sbjct: 118 EKAKSTEKTPHHVKWLS-DVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETR-- 174
Query: 111 QGKWFCHNIADLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
+ ++ + D V G++ +L L+E G V++ G + GQ G G
Sbjct: 175 --------VKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQ 226
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
P V E ++ +S+ AV+ GDV+GWG ++ G++ + + S VL
Sbjct: 227 PVQVS---ELTDVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTKKSSNSPVL--ID 280
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPT--LIPSTLFGQH 282
G+ ++ V SG L ++G V++WG +G LG G V+ SM P + ST
Sbjct: 281 GIYDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLEST----- 335
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
P +++ ++ AG AI G ++ WG N G+LGLG + Q +P K+
Sbjct: 336 --EPLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 56 FVRIPLPVK---HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
F + PV S HL + + + +G+ +G S G G +G
Sbjct: 15 FASLFSPVASHAQDSFNYDHLLSADNNRTFMVKKDGSVIYGTGSDANGGLG---SSSVKG 71
Query: 113 KWFCH-NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCL 170
K + DL ++D G HT+ L + G V++ GW A G+ G + E TP
Sbjct: 72 KTTSPVPVDDLSDVLMVD--TGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHH 129
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
V+ + + ++ + + LA+ + G V+ +G + GQ+ + + V Q G++
Sbjct: 130 VKWLSD---VKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPV--QVSGLT 184
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
IV + +G L+++G V++WG G LG G + ++++P Q +
Sbjct: 185 DIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTR-EKALQPV----------QVSEL 233
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ V ++ G A+T+ G +Y WG NQ G+LG GT + P+ +
Sbjct: 234 TDVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTKKSSNSPVLI 279
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 134 QDHTLFLTESGKV-YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
+ T + + G V Y G A+G G + + T + ++ ++ + + +A
Sbjct: 40 NNRTFMVKKDGSVIYGTGSDANGGLGSSSVKGKTTSPVPVDDLS--DVLMVDTGTSHTVA 97
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G V+ WG S YG++ +E ST + K +S + V +G + L ++G V+
Sbjct: 98 LQKDGTVWTWGWSAYGELG-NEKAKSTEKTPHHVKWLSDVKQVRAGENFTLALKEDGTVW 156
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
++G G LG G +R +KP Q + + + ++ AG A++ G +
Sbjct: 157 AFGKNRSGQLGDGTTETR-VKPV----------QVSGLTDIVAIDAGEEFSLALSEDGTV 205
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ WG N GQLG GT E P++V+
Sbjct: 206 WAWGNNSVGQLGNGTREKALQPVQVS 231
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I H+ G HT ++ FT+G +G+ G G + G + L G ++D
Sbjct: 61 ITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHG-----NESGHSTPKRVDSLVGLAVVD 115
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIVKLSSAVD 188
CG HT +T G +Y+ G +G G G +Q TP L+ + G+R+V+LS+
Sbjct: 116 IACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLE-RLSGKRVVQLSACGF 174
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
++D G+V+ WG ++G++ +E +PR++ G R V ++ GG ++
Sbjct: 175 HTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLG-KRPVQISCGGFHSAVVTA 233
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPST--LFGQHQFNPKSKVESLIAGPCTFGA 302
+G +Y++G +G LG G KV++ +KPTL+ +F + + G A
Sbjct: 234 DGKMYTFGGGEHGQLGHGDKVNK-VKPTLVKDLDGVF----------LTQITCGWSHSVA 282
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T+ +Y WG +G+LG G
Sbjct: 283 LTSSHEVYTWGNGDHGKLGHG 303
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
T G +T+G G+ G G D K+ L G+ I CG HT ++
Sbjct: 23 THGGGVYTWGRGDDGRLGHG-----DNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSK 77
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G +++ G G G+ G G+ + TP V + G +V ++ V+ +G ++ WG
Sbjct: 78 GNLFTWGGGMYGKLGHGNESGHSTPKRV-DSLVGLAVVDIACGSRHTAIVTSRGCLYTWG 136
Query: 204 NSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ E G ++E TP++L + G R+V +++ G L D G VY+WG G G+
Sbjct: 137 DKENGVAGHGDTEGHQYTPKLLERLSG-KRVVQLSACGFHTGCLTDAGEVYTWGEGKFGR 195
Query: 262 -GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G R+ + TL G+ + G +T G +Y +G ++GQL
Sbjct: 196 LGHGAERNCHSPRLVETLLGKRPVQ-------ISCGGFHSAVVTADGKMYTFGGGEHGQL 248
Query: 321 GLGTVEDQPFPLKV 334
G G ++ P V
Sbjct: 249 GHGDKVNKVKPTLV 262
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + DIACG T + T L+ G + G+ D +L+
Sbjct: 111 LAVVDIACGSRHTAIVTSRG----CLYTWGDKENGVAGHGDTEGHQYTPKLLERL----- 161
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--- 118
++ L+ HT +TD +T+G FG+ G G + CH+
Sbjct: 162 ----SGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN--------CHSPRL 209
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G++ + CG H+ +T GK+Y+ G G GQ G G N+ P LV+ +++G
Sbjct: 210 VETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK-DLDGV 268
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+ +++ +A++ +V+ WGN ++G++ ++STP+++ + G ++V VAS
Sbjct: 269 FLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVG-QKVVCVAS 327
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 127/271 (46%), Gaps = 44/271 (16%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ------ 134
+++T ++ F G+NS G G G D G LE K+ DA+C +
Sbjct: 111 LMVTQDDDVFALGSNSSGCLGLG-----DTHGS--------LEPRKV-DALCRKGIHALA 156
Query: 135 ----DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG---ERIVKLSSAV 187
H L +TESG++ S WG +G LG NN T LV I R+ +++
Sbjct: 157 YGSGPHVLAVTESGELLS--WGHNGYCQLG--NNCNTQGLVPSSISAGLSHRVAQVACGS 212
Query: 188 DCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ GDV+ WG + GQ+ S S TPR +S G R + VA G ++ +
Sbjct: 213 HHSLALTTNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVM 272
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+ G V+ WGY G LG G V+++ P + + L G + ++ G A+
Sbjct: 273 ENGEVFGWGYNGNGQLGLGNNVNQT-SPCRV-TNLQG-------VVIHKVVCGYAHTMAL 323
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ G LY WG N YGQLG G +Q P K+
Sbjct: 324 SDEGVLYTWGANSYGQLGTGNKANQVSPFKM 354
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 142/323 (43%), Gaps = 49/323 (15%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+AC +G + ++ +F G NS LG D P + V + R
Sbjct: 99 LACVFGSSGNEALMVTQDDDVFALGSNSSGCLGLGDTHGSLEPRK-VDALCR-------- 149
Query: 67 STQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCG-----RGIVQEEDYQGKWFCHNIA 120
I LA G H + +T++ ++G+N + Q G +G+V G H +A
Sbjct: 150 -KGIHALAYGSGPHVLAVTESGELLSWGHNGYCQLGNNCNTQGLVPSSISAG--LSHRVA 206
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ CG H+L LT +G VY+ G GQ G G NQ TP V I G R
Sbjct: 207 QV--------ACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRC 258
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+ ++ +AV + G+VFGWG + GQ+ + + ++P ++ +GV I V G
Sbjct: 259 IGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVV-IHKVVCGY 317
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTL-----FGQHQFNPKSKVE 291
+ L+DEG++Y+WG YG LG G K ++ + P +P+ + +N S V
Sbjct: 318 AHTMALSDEGVLYTWGANSYGQLGTGNKANQ-VSPFKMPTDIGRIVEIAASHYNHISAV- 375
Query: 292 SLIAGPCTFGAITNFGHLYMWGK 314
+T +YMWG+
Sbjct: 376 -----------MTQTSRVYMWGQ 387
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 37/199 (18%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++ +A G H++ +T N + +G N+ GQ G G + K + + G +
Sbjct: 202 SHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQPTPRKVS----SGIGGRR 257
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ CGQ ++ + E+G+V+ G+ +GQ GLG+ NQ +PC V ++G I K+
Sbjct: 258 CIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVT-NLQGVVIHKVVCG 316
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--------------------------------ISESE 214
+A+SD+G ++ WG + YGQ IS
Sbjct: 317 YAHTMALSDEGVLYTWGANSYGQLGTGNKANQVSPFKMPTDIGRIVEIAASHYNHISAVM 376
Query: 215 MQISTPRVLSQCKGVSRIV 233
Q S + QC+G S V
Sbjct: 377 TQTSRVYMWGQCRGQSVTV 395
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 191 LAVSDKGDVFGWGNSEYG--QISESEMQISTPRVLSQC-KGVSRIVDVASGGSACTMLND 247
L V+ DVF G++ G + ++ + +V + C KG+ + G + +
Sbjct: 111 LMVTQDDDVFALGSNSSGCLGLGDTHGSLEPRKVDALCRKGIHALA--YGSGPHVLAVTE 168
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G + SWG Y LG ++ + P+ I + L +V + G A+T
Sbjct: 169 SGELLSWGHNGYCQLGNNCN-TQGLVPSSISAGL--------SHRVAQVACGSHHSLALT 219
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA--VGGQK 340
G +Y WG+N GQ+G G+ +QP P KV+ +GG++
Sbjct: 220 TNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRR 257
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 33/263 (12%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFG 301
+Y +G G LG +P+ L G H+ P+ ++ G T
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVV 257
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
N +Y +G Q+GQLGLGT
Sbjct: 258 LTEN--AVYTFGLGQFGQLGLGT 278
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST 219
+ C + V E+ +I+++ + ++T
Sbjct: 355 ACGGCHMVVFAAPHRGVAKEIEFDEINDTCLSVAT 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 25/245 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + P + V I P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKNVSNVCVPQQ-----VTIGKP 191
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V ++ G H+ +T + + FG G+ G +++ I
Sbjct: 192 VSW-------ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+S + ++D G ++ +G+ +G++ + + + C R + VA GG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGG- 358
Query: 241 ACTML 245
C M+
Sbjct: 359 -CHMV 362
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIV 82
N +++ CG NS QLG P+ + P P++ ST I ++ G+ H++
Sbjct: 46 NHRVYSCGDNSRGQLGQKSPQS-----------TKRPEPIQALSTVHIDLVSCGKEHSVA 94
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ FT+G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 95 VCHQGRVFTWGAGSEGQLGIGESKEISFMPT----KINSLAGIKIIQVSCGHYHSLALSE 150
Query: 143 SGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G GQ GLG +L +Q +P V+ +EG + ++++ A+S G FG
Sbjct: 151 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGTSFG 209
Query: 202 WGNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
WGN+ GQ++ S + QI P + K ++ +V ++ G ++L ++G V+++G
Sbjct: 210 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN-VVYISCGYEHTSVLTEDGQVFTFG 266
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A+G H++++ N ++ G+NS GQ G+ Q I L I CG
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRP-----EPIQALSTVHIDLVSCG 88
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
++H++ + G+V++ G G++GQ G+G + G +I+++S LA+
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148
Query: 194 SDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
S+ G VF WG++ GQ + + ++P+ + +G+ + VA+GG+ L+ G
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP-LAQVAAGGTHSFALSLMGTS 207
Query: 252 YSWGYGLLGQ 261
+ WG GQ
Sbjct: 208 FGWGNNRSGQ 217
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G K++ A G+ H+L L + +VYSCG + GQ G + + P ++ + I +
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-LSTVHIDLV 85
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + +AV +G VF WG GQ I ES+ P ++ G+ +I+ V+ G
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQVSCGHYH 144
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G + P + S + P ++V AG
Sbjct: 145 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-----EGIPLAQVA---AGGT 196
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
A++ G + WG N+ GQL L
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALS 221
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ ++ ++F G N QLG + + V S IPL
Sbjct: 133 IKIIQVSCGHYHSLALSEDG----QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL 188
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNI 119
+A G H+ ++ +F +GNN GQ +E+ Y+ H+I
Sbjct: 189 A---------QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKP----HSI 235
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L+ ++ CG +HT LTE G+V++ G + Q + + P L+ G
Sbjct: 236 GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG 289
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G +++K +S L + V+ G++ GQ+ + Q + Q I V+
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVS 86
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G + +G V++WG G GQ G S PT I ++L G K+ +
Sbjct: 87 CGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKI-NSLAG-------IKIIQV 138
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
G A++ G ++ WG N+ GQLGLG + Q P KV
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 180
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 137/318 (43%), Gaps = 67/318 (21%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE---------- 108
P PV+ S +I ++A G + T I+ + +T+G+ +G+ G E
Sbjct: 82 PFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALK 141
Query: 109 -----------------DYQGKWFCHNIA-------------------DLEGEKIMDAVC 132
D G +C A DLE EK++ C
Sbjct: 142 GKNIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTEHVFIPRLIKGDLEKEKVISVSC 201
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ HT +TE G+V++ G G +G+ G G N+Q P V+ E ++V ++ D +
Sbjct: 202 GRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIF 259
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
V + G ++ G +YGQ+ S E + TPR LS G+S +V +++G L +
Sbjct: 260 VCESG-LYSCGADDYGQLGLGRSHGERFVQTPRSLSG-TGLSDVVAISAGDYHVCALGRD 317
Query: 249 GLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
GLVY+WG G LG G K S+ + F ++ + G A+T
Sbjct: 318 GLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNF---------EIVQVACGGGHTAAVTK 368
Query: 306 FGHLYMWGKNQYGQLGLG 323
G LY WG+ + GQLG G
Sbjct: 369 DGVLYTWGRGRDGQLGRG 386
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 155 GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE 214
GQ G GH + P V + G+RIV +++ C A+S GDV+ WG+ EYG++ ++
Sbjct: 69 GQLGQGHERPADRPFPVEA-LSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHND 127
Query: 215 -MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
+ PR++ KG IV V+ GG+ ++ +G +Y WG P L
Sbjct: 128 DSNENLPRLVEALKG-KNIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTEHVFIPRL 186
Query: 274 IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
I L K KV S+ G A+T G ++ WG G+LG G Q P K
Sbjct: 187 IKGDL-------EKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKK 239
Query: 334 V 334
V
Sbjct: 240 V 240
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+ + +K Q+ R + + TFG N GQ G+G + D
Sbjct: 30 VEMQLKSSWEQLLEERKNRMKKAALENGTLLTTFGLNLIGQLGQGHERPADRP-----FP 84
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G++I+ G T ++ G VY+ G G G+ G +N+ P LV ++G+
Sbjct: 85 VEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEA-LKGK 143
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
IVK+S + + A+ G ++ WG + +E + PR++ +++ V+ G
Sbjct: 144 NIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTE-HVFIPRLIKGDLEKEKVISVSCG 202
Query: 239 GSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-- 293
S + ++G V++WG G LG G K S Q+ PK KV+SL
Sbjct: 203 RSHTAAVTEKGEVWTWGNGYEGELGHGEKNS----------------QYQPK-KVQSLTE 245
Query: 294 ----IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
+A F LY G + YGQLGLG + F
Sbjct: 246 KVVDVACGRDFTIFVCESGLYSCGADDYGQLGLGRSHGERF 286
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG FT+ +S L+ CG + QLG R G FV+ P
Sbjct: 246 KVVDVACGRDFTIFVCESG-----LYSCGADDYGQLGL--GRSHGE------RFVQTPRS 292
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + + ++ G H + + +T+G GQ G G ++ D + +
Sbjct: 293 LSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHG--EKADCS---LAKPVDN 347
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG 160
L +I+ CG HT +T+ G +Y+ G G DGQ G G
Sbjct: 348 LRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRG 386
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI ++ + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAVSKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSDPKVIE---------NIRDQTISYISCGES 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSDPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
I CG+ HT +T+ G +Y+ G G G+ GLG + N P L
Sbjct: 297 ISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTL 342
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ +S P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIG 189
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 25/245 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + P + V I P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKNVTNVCVPQQ-----VTIGKP 191
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V ++ G H+ +T + + FG G+ G +++ I
Sbjct: 192 VSW-------ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+S ++D G ++ +G+ +G++ + + + C SR + VA GG
Sbjct: 300 ISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGG- 358
Query: 241 ACTML 245
C M+
Sbjct: 359 -CHMV 362
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG DH++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGDHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + E IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 224 LSDEEDRESPCHVKL 238
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGDHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G +E + I L
Sbjct: 83 ---DEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRL----IQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + +P + +R + ++ +++ G HT V+T +
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCH--VKLLR--------AQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 21/257 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G HT V+T+N + FG+N++GQ G G ++ K C + L+ EK+ A
Sbjct: 39 HISCGDEHTSVVTENGKLYMFGSNNWGQLGFG---SKNAVNKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G ++GQ GLG + T L+ + +I +L++
Sbjct: 94 CGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+++ G + WG++ GQI + +S P + K VS I + G ++ +G
Sbjct: 154 VLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI---SCGYYHSALITQDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y++G G LG PK ++ K + S + G KV + G + G
Sbjct: 211 LYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG--------KVSKVACG-GGHTVVLAEG 261
Query: 308 HLYMWGKNQYGQLGLGT 324
+Y +G QYGQLG GT
Sbjct: 262 DVYTFGLGQYGQLGHGT 278
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 143/326 (43%), Gaps = 44/326 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CG T V T+ N KL+ G N+ QLG+ P + V+ P K
Sbjct: 40 ISCGDEHTSVVTE----NGKLYMFGSNNWGQLGFGSKNAVNKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT++ T+ + G NS GQ G G +E + H I+ +
Sbjct: 89 ---VKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEE-----RSTFHLISFFTKQH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + LTE G++ G ++GQ GLG P V I K S
Sbjct: 141 KIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQV-------DIGKPVS 193
Query: 186 AVDC----VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGS 240
+ C ++ G+++ +G E G++ S Q+ ++ G+S ++ VA GG
Sbjct: 194 CISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGKVSKVACGGG 253
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L EG VY++G YG LG G V + +P + G+H K+ + G
Sbjct: 254 HTVVLA-EGDVYTFGLGQYGQLGHGTFVFETSEPKTVDH--LGKH------KICHIACGE 304
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLG 323
IT G +Y +G ++G+LGLG
Sbjct: 305 NHTALITENGLMYTFGDGRHGKLGLG 330
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 32/284 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ACG T++ T+ + ++ G NS+ QLG D ++ L+ F +
Sbjct: 88 KVKLAACGRNHTLICTEQGN----VYAAGGNSEGQLGLGDTEERST-FHLISFFTK---- 138
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+IK LA G + V+T++ +G+NS GQ G G D H + D+
Sbjct: 139 ----QHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLG-----DKAYVSVPHQV-DI 188
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERI 180
G+ + CG H+ +T+ G++Y+ G +G+ GL L N + P LV G I G ++
Sbjct: 189 -GKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG-ISG-KV 245
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASG 238
K++ + +++ GDV+ +G +YGQ+ + S P+ + G +I +A G
Sbjct: 246 SKVACGGGHTVVLAE-GDVYTFGLGQYGQLGHGTFVFETSEPKTVDHL-GKHKICHIACG 303
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPK-VSRSMKPTLIPSTL 278
+ ++ + GL+Y++G +G LG G + + PTL + L
Sbjct: 304 ENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFL 347
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
FTFG F E+ K WF + +K + CG +HT +TE+GK+Y
Sbjct: 15 FTFGKCKFA---------ENVPSKFWF-------KNDKPLHISCGDEHTSVVTENGKLYM 58
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G GQ G G N P V+ ++ E++ + + L +++G+V+ G + G
Sbjct: 59 FGSNNWGQLGFGSKNAVNKPTCVKA-LKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEG 117
Query: 209 QISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
Q+ + + ST ++S +I +A+G +L ++G + WG G +G G K
Sbjct: 118 QLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDK 177
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
S +P HQ + V + G IT G LY +G+ + G+LGL
Sbjct: 178 AYVS-----VP------HQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGL 224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
+ ++ + +S + V++ G ++ +G++ +GQ+ S+ ++ P + K ++
Sbjct: 32 FKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALK-PEKVK 90
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
A G + + ++G VY+ G G LG G RS T F + K+
Sbjct: 91 LAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERS--------TFHLISFFTKQHKI 142
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ L AG T +T G L MWG N GQ+GLG P +V +G
Sbjct: 143 KQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIG 189
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G H++ + + + G N +GQ GR Q I+ LE + I+D
Sbjct: 36 VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRIEQ-------ISSLEAQTIVD 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVD 188
CG +H++ + + G +YS G G++GQ G G +++ TP + G + +I+++S
Sbjct: 89 VSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITG-LLNRKIIQISCGNF 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQI--STPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+++ G VF WG ++ GQ+ I +TP+++ KG+ +V V +GGS L+
Sbjct: 148 HSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIP-LVQVTAGGSQTFALS 206
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G V++WG GQ + + K T P + V + G +
Sbjct: 207 MSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG----VAYISCGEEHTAVLNKD 262
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y +G + YGQLG + P K+
Sbjct: 263 GIVYTFGDDTYGQLGQQSGNQTSVPQKI 290
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+N FGQ V EE+ + F N + E + G+ H+L+L + G + SC
Sbjct: 2 YCWGDNCFGQLA---VLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSC 58
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ G NN + +E + IV +S + +A+ D+G+++ WG+ GQ
Sbjct: 59 GQNPYGQLGRKG-NNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQ 115
Query: 210 ISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPK 264
+ + TP+ ++ +I+ ++ G L ++G V+SWG G LG G +
Sbjct: 116 LGTGKFSSKNFTPKRITGLLN-RKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQ 174
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ P L+ S V+ G TF A++ G ++ WG+N GQLG
Sbjct: 175 IINQATPQLVKS-------LKGIPLVQVTAGGSQTF-ALSMSGTVFAWGRNNAGQLGF 224
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEK 126
+I ++ G H++ + ++ F++G N GQ G G I+ + Q + L+G
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQL------VKSLKGIP 191
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER---IVKL 183
++ G T L+ SG V++ WG + LG N+ + ++ R + +
Sbjct: 192 LVQVTAGGSQTFALSMSGTVFA--WGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYI 249
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S + ++ G V+ +G+ YGQ+ +S Q S P+ + + SR V + G
Sbjct: 250 SCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEE---YSRQVSQVACGRYH 306
Query: 243 TML 245
T+L
Sbjct: 307 TLL 309
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 135/304 (44%), Gaps = 59/304 (19%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
ST +A GRAHT+ + D + ++ G+N GQ G + ++ K + LE
Sbjct: 123 STLASAIACGRAHTLFLVDGQ-VYSCGSNDQGQLG-----HKKHRSK--PERVDALEPYT 174
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL--------------------------- 159
I CG+ H+L LT +G+V++ G Q GL
Sbjct: 175 ITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVD 234
Query: 160 -------GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
+++ P LVR + G +IV++ + L +S++GDVF WG++ GQ+
Sbjct: 235 ELDAATLAYMDFMTRPRLVRA-LTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCL 293
Query: 213 SEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRS 268
E++ + P ++ + G+ I +A+GG L G VYSWG +G LG G
Sbjct: 294 RELKTVPVPTLVKELYGIP-IRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVG-----D 347
Query: 269 MKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
P IPS L +HQF + G +T G +Y +G GQLG GT+++
Sbjct: 348 TAPHTIPSRLKTLEHQF-----CAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQN 402
Query: 328 QPFP 331
+ P
Sbjct: 403 EINP 406
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI I CG F++V ++ D +F G N+ QL + + P LV IP
Sbjct: 260 KIVQIVCGANFSLVLSERGD----VFAWGDNTSGQLCLRELKTVPVP-TLVKELYGIP-- 312
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I+ LA G HT+ +T N +++GNN FGQ G G D + L
Sbjct: 313 -------IRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVG-----DTAPHTIPSRLKTL 360
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E + CG+DH++ LTE+G VYS G G GQ G G L N+ P ++ E + K
Sbjct: 361 EHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMI-----FELMGK 415
Query: 183 LSSAVDC-----VLAVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQCKGVSRI 232
+S V C ++ ++ +G GQ+ E + + TP +L + + I
Sbjct: 416 SASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTP-MLVRVLDATPI 474
Query: 233 VDVASGGSA 241
+ +A+G SA
Sbjct: 475 LRIATGASA 483
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 143/354 (40%), Gaps = 57/354 (16%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IACG T+ + ++ CG N QLG+ R K ++ + +
Sbjct: 129 IACGRAHTLFLVDGQ-----VYSCGSNDQGQLGHKKHRSKPERVDALEPYT--------- 174
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG---------------------RGIV 105
I +A G H++ +T N F +G+N Q G I
Sbjct: 175 ---ITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASID 231
Query: 106 QEEDYQGKWFCHN--------IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
++ + + L G KI+ VCG + +L L+E G V++ G GQ
Sbjct: 232 DVDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQL 291
Query: 158 GLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
L L P LV+ E+ G I +L++ LA++ G V+ WGN+++GQ+ +
Sbjct: 292 CLRELKTVPVPTLVK-ELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAP 350
Query: 218 STPRVLSQCKGVSR--IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP 275
T + S+ K + +A G +L + G VYS+G G GQG +++ + P
Sbjct: 351 HT--IPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAG--GQGQLGHGTLQNEINP 406
Query: 276 STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQ 328
+F + KS + L T +Y +G GQLG G VE Q
Sbjct: 407 RMIF---ELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQ 457
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 46/238 (19%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG+ HTLFL + G+VYSCG GQ LGH ++ P V +E I +++ L
Sbjct: 131 CGRAHTLFLVD-GQVYSCGSNDQGQ--LGHKKHRSKPERVDA-LEPYTITQIACGETHSL 186
Query: 192 AVSDKGDVFGWGNSEYGQI----SESEMQIST---------------------------- 219
A++ G VF WG+++ Q+ SES Q ST
Sbjct: 187 ALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDF 246
Query: 220 ---PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPS 276
PR++ G +IV + G + +L++ G V++WG GQ R +K +P
Sbjct: 247 MTRPRLVRALTG-HKIVQIVCGANFSLVLSERGDVFAWGDNTSGQ--LCLRELKTVPVP- 302
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
TL + P + L AG A+T G +Y WG NQ+GQLG+G P ++
Sbjct: 303 TLVKELYGIP---IRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRL 357
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 197 GDVFGWGNSEYGQI-----SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEG 249
G V+ WGN GQ+ ++ + + P L V S + + G A T+ +G
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVDG 142
Query: 250 LVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
VYS G GQ G K RS KP + + P + + + G A+T+ G
Sbjct: 143 QVYSCGSNDQGQLGHKKHRS-KPERVDA-------LEPYT-ITQIACGETHSLALTSNGQ 193
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
++ WG N+ QLGL E P
Sbjct: 194 VFAWGDNKASQLGLTPSESSRQP 216
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 35/320 (10%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVIT 84
KLF G N LG H P K IP VK + I A G H + +
Sbjct: 58 KLFTWGWNQRGTLG-HPPETKTE---------NIPSQVKALANVNIVQAAIGGWHCLAVD 107
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--GEKIM--DAVCGQDHTLFL 140
D A+ +G N +GQCG +++D G+ +I + K++ G H++ L
Sbjct: 108 DQGRAYAWGGNEYGQCGEEPERKDD-TGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVL 166
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G V+S WG G + P V+G ER+ ++ LA+ + G ++
Sbjct: 167 TREGHVWS--WGQPWPPG--DIKQISVPVRVQGL---ERVRLIAVGAFHNLALQEDGTLW 219
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WGN+EYGQ+ + Q + + Q +VD+A+GG T L D+G VY WG +G
Sbjct: 220 AWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHG 279
Query: 258 LLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G S M P + + L G+ + + G A+T G +Y +G+
Sbjct: 280 RLGFGDNDKSSKMVPQRV-NLLVGE-------DIVQVSCGGTHSVALTRDGRMYTFGRGD 331
Query: 317 YGQLGLGTVEDQPFPLKVAV 336
+G+LG G P++V +
Sbjct: 332 HGRLGYGRKVTTGQPMEVPI 351
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E++ W C + LE K+ V G ++L + + GK+++
Sbjct: 8 IAWGSGEDGQLGIGNNEEKE----WVC-IVKALEPYKVRSVVAGSRNSLAICDDGKLFTW 62
Query: 150 GWGADGQTGLGHLNNQET---PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH +T P V+ + IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPPETKTENIPSQVKA-LANVNIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + T R L +C + VA+GG+ +L EG V+SWG
Sbjct: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQ-- 177
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P +K +P + G +V + G A+ G L+ WG N+YG
Sbjct: 178 ----PWPPGDIKQISVPVRVQGLE------RVRLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 319 QLGLGTVEDQPFPLKV 334
QLG G + + P+ V
Sbjct: 228 QLGTGDTQPRSQPITV 243
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
TES V + G G DGQ G+G+ +E C+V+ +E ++ + + LA+ D G
Sbjct: 1 MATES-SVIAWGSGEDGQLGIGNNEEKEWVCIVKA-LEPYKVRSVVAGSRNSLAICDDGK 58
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG- 255
+F WG ++ G + + T + SQ K ++ IV A GG C ++D+G Y+WG
Sbjct: 59 LFTWGWNQRGTLGHPP-ETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
YG G+ P+ L + Q + K V + AG +T GH++ WG
Sbjct: 118 NEYGQCGEEPERKDDTGRPLRRDIVIPQ-RCASKLVVRQVAAGGTHSVVLTREGHVWSWG 176
Query: 314 K 314
+
Sbjct: 177 Q 177
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAVSKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + +
Sbjct: 355 ACGGCHMVI 363
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ +S P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKL 327
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 143/308 (46%), Gaps = 56/308 (18%)
Query: 27 LFGCGLNSDSQLGYH--DPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
LFG G D+QLG H D ++ +P P+ V +P T I H+A G HT+ +
Sbjct: 9 LFGWGACDDNQLGPHEQDSQQISSPQ---------PITVPNPWT-IAHVACGYKHTLFLN 58
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ ++ G N FGQ GR D++ I LE I D CG H ++ +G
Sbjct: 59 ADGEVYSCGGNEFGQLGRSD-SPSDFR------RITALENHTITDIACGAYHNAAISYTG 111
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++++ G ++GQ LG + + ++R E R+V++S ++ L ++D +F +G+
Sbjct: 112 RLFTWGCNSNGQ--LGREGDDSSVKMIRSLAE-HRVVQVSLGLEHSLVLTDTSRLFVFGS 168
Query: 205 SEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+ +GQ+ S++ I P+ L G+ I +++GG +L G +Y WG YG
Sbjct: 169 NIWGQLGLGFRSDLPIVIPQQLMCLAGLP-IRCISAGGVHSAVLTISGTLYVWGGNKYGQ 227
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG P +E+ +A G+ ++ + +W N+YG
Sbjct: 228 LGLEP--------------------------IET-VAAETVSGSRSSIENAPVWCGNKYG 260
Query: 319 QLGLGTVE 326
QLGL +E
Sbjct: 261 QLGLEPIE 268
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 139/343 (40%), Gaps = 46/343 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
ITDIACG + + +LF G NS+ QLG ++G+ + M I
Sbjct: 94 ITDIACGAYHNAAISYTG----RLFTWGCNSNGQLG-----REGDDSSVKM----IRSLA 140
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+H Q+ + G H++V+TD F FG+N +GQ G G + + L
Sbjct: 141 EHRVVQV---SLGLEHSLVLTDTSRLFVFGSNIWGQLGLGFRSDLPIV---IPQQLMCLA 194
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN--QETPCLVRGEIE----- 176
G I G H+ LT SG +Y G GQ GL + ET R IE
Sbjct: 195 GLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVW 254
Query: 177 -GERIVKLS-SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
G + +L ++ V A + G N+ + +S P + KG R V
Sbjct: 255 CGNKYGQLGLEPIETVAAETVSGSRSSIENA-------PQHSVSVPTAVRSLKG-QRAVF 306
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
V G S +L +EG V+++G +G LG G S K IP + NP ++V
Sbjct: 307 VDCGESHTVVLTEEGGVFTYGGNQFGQLGHG----ESSKSVSIPRKV-ADLMDNPTTQVA 361
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + + G +Y +G GQLG T D P V
Sbjct: 362 C--GRMHTLVLVPSLGCVYAFGAGSEGQLGTNTNTDSSRPTLV 402
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G +HT+V+T+ G FT+G N FGQ G G E + +ADL CG+
Sbjct: 310 GESHTVVLTEEGGVFTYGGNQFGQLGHG----ESSKSVSIPRKVADLMDNPTTQVACGRM 365
Query: 136 HTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
HTL L S G VY+ G G++GQ G + P LV+G
Sbjct: 366 HTLVLVPSLGCVYAFGAGSEGQLGTNTNTDSSRPTLVKG 404
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 45/305 (14%)
Query: 44 RKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG----- 98
+K N V S+V + IKH++ G HT+VITD F FG + G
Sbjct: 244 QKNENAQSFVRSYVNKTEINEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLL 303
Query: 99 -QCG----------RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+C +G + E++ + + K + CG H++ LT++G+++
Sbjct: 304 RECQLLLQNKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIF 363
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+ G GQ G GH N+Q P ++ E+ I S +SD+ +++ WGN +Y
Sbjct: 364 TWGKNTRGQLGQGHRNDQLKPTMIIIEVMATSIC---SGDQHSAFISDEKELYTWGNGQY 420
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-----LNDEGLVYSWGYGLLGQG 262
++ ++T + K V + DV +C M + +EG VY+WG G+ G+
Sbjct: 421 FRLGHG---VTTDELYP--KKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGK- 474
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
V + K +P+ + AG A+T+ G LY WG ++ G LG+
Sbjct: 475 LGVQENNKSLHLPT---------------RVSAGGLHSMALTDQGILYSWGSSKGGVLGI 519
Query: 323 GTVED 327
G D
Sbjct: 520 GFQRD 524
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 54/221 (24%)
Query: 125 EKIMDAV----CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
E+I D + CG HTL +T+ G ++ G G G
Sbjct: 264 EEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQG------------------------- 298
Query: 181 VKLSSAVDCVLAVSDKGDVFG--WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
KL +C L + +K + GN + + E + P+ + + VA G
Sbjct: 299 -KLFLLRECQLLLQNKSKIQKGQLGNENFVNVYEPTELLVWPK--------RKFIQVACG 349
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
S L D G +++WG G LGQG + + +KPT+I + S+ +
Sbjct: 350 SSHSMALTDNGQIFTWGKNTRGQLGQGHR-NDQLKPTMIIIEVMAT----------SICS 398
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G I++ LY WG QY +LG G D+ +P KV V
Sbjct: 399 GDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVV 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL-NNQETPCLVRGEIEGERIVKLS 184
KI+ C H + ++ G YS G Q GLG++ P ++G +E +RI+ +S
Sbjct: 790 KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRII-MS 848
Query: 185 SAVDCVLAV-SDKGDVFGWGNSEYGQISESEMQ---ISTPRVLSQCKGVSRIVDVASGGS 240
+ D A+ +DKG+++ +G S+ G + E +S P++++ + ++ +ASG
Sbjct: 849 TCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMIND---IPPMIFLASGPQ 905
Query: 241 ACTMLNDEG-LVYSWGYGLLGQ 261
+ ++ +Y+WG L GQ
Sbjct: 906 GMMAITEQKRQIYAWGNNLYGQ 927
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVA 236
+I+ +S + +A+S KG + WG+++Y Q+ M P+ + RI+
Sbjct: 790 KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMST 849
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPK----VSRSMKPTLIPSTLFGQHQFNPKSK 289
+L D+G ++++G G+LG K VS IP +F
Sbjct: 850 CSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF---------- 899
Query: 290 VESLIAGPCTFGAITNFG-HLYMWGKNQYGQLGL 322
L +GP AIT +Y WG N YGQLG+
Sbjct: 900 ---LASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930
Score = 45.4 bits (106), Expect = 0.039, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY-----QGKW 114
P + + +I ++ H I I+ A+++G+N + Q G G + + ++ QG
Sbjct: 781 PFLIPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGA- 839
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ--ETPCLVR 172
LE ++I+ + C + LT+ G++++ G G G N P ++
Sbjct: 840 -------LETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMIN 892
Query: 173 GEIEGERIVKLSSAVDCVLAVSD-KGDVFGWGNSEYGQI 210
+ ++ L+S ++A+++ K ++ WGN+ YGQ+
Sbjct: 893 ---DIPPMIFLASGPQGMMAITEQKRQIYAWGNNLYGQL 928
>gi|427796171|gb|JAA63537.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 550
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 44/280 (15%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
HT+++T+ AFT+G N GQ G+ ++ D + L+ ++ A CG+ HTL
Sbjct: 192 HTVLLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTL-----VETLKDSMVVAAACGRAHTL 246
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
FLT+ G V++CG GQ G+G N R + V++S + + V +G
Sbjct: 247 FLTDHGSVFACGDNKMGQCGVGS-QNASVHVPTRVAFKLRPAVRVSCGGEFSVLVDCRGH 305
Query: 199 VFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR---------------------IVD 234
V+ +G EYGQ+ ++ +++ ++ +C+ V R IV+
Sbjct: 306 VYTFGCPEYGQLGHNTDGRYFVTSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDVHIVE 365
Query: 235 VASGGSACTMLNDEGLVYSW---GYGLLGQG-PKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
VASG + L++ +SW GYG LG PK M P LI + P +
Sbjct: 366 VASGLNHTIALDERKRCFSWGFGGYGRLGHNEPK--DEMVPRLIKAFE------GPNRGL 417
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
S+ AG A++ G LY WG N +G G T+ +P
Sbjct: 418 CSVYAGGTFSMAVSELGVLYFWGMNNHG--GEATMYPKPI 455
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 54/284 (19%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K C TV+ T+ + F G N QLG D +++ P LV +
Sbjct: 181 VKAVFSGCSACHTVLLTEQG----QAFTWGRNDKGQLGQCDLKRRDLPT-LVETL----- 230
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + A GRAHT+ +TD+ F G+N GQCG G + +
Sbjct: 231 ----KDSMVVAAACGRAHTLFLTDHGSVFACGDNKMGQCGVGSQNASVH--------VPT 278
Query: 122 LEGEKIMDAV---CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-------------- 164
K+ AV CG + ++ + G VY+ G GQ LGH +
Sbjct: 279 RVAFKLRPAVRVSCGGEFSVLVDCRGHVYTFGCPEYGQ--LGHNTDGRYFVTSNKLQFKC 336
Query: 165 QETPCLVRGEIEGER-----------IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
+ P V+ I+ R IV+++S ++ +A+ ++ F WG YG++ +
Sbjct: 337 ELVPRRVQVFIDRNREGHVVSVDDVHIVEVASGLNHTIALDERKRCFSWGFGGYGRLGHN 396
Query: 214 EMQIS-TPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWG 255
E + PR++ +G +R + V +GG+ +++ G++Y WG
Sbjct: 397 EPKDEMVPRLIKAFEGPNRGLCSVYAGGTFSMAVSELGVLYFWG 440
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 28/291 (9%)
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
PV + ATG A T++ + T G + G QE + W H +A
Sbjct: 121 PVDDAKRGFRVQATGSAGTLLFSGGTNWDTIGRRPKDKQKAGASQERNL---WGPHRLAW 177
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
K + + C HT+ LTE G+ ++ G GQ G L ++ P LV ++ +V
Sbjct: 178 PHRVKAVFSGCSACHTVLLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTLVE-TLKDSMVV 236
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTP-RVLSQCKGVSRIVDVASG 238
+ L ++D G VF G+++ GQ + + P RV + + R V+ G
Sbjct: 237 AAACGRAHTLFLTDHGSVFACGDNKMGQCGVGSQNASVHVPTRVAFKLRPAVR---VSCG 293
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKS 288
G +++ G VY++G YG LG K L+P + N +
Sbjct: 294 GEFSVLVDCRGHVYTFGCPEYGQLGHNTDGRYFVTSNKLQFKCELVPRRVQVFIDRNREG 353
Query: 289 KVES--------LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
V S + +G A+ + WG YG+LG +D+ P
Sbjct: 354 HVVSVDDVHIVEVASGLNHTIALDERKRCFSWGFGGYGRLGHNEPKDEMVP 404
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 33/263 (12%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFG 301
+Y +G G LG +P+ L G H+ P+ ++ G T
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVV 257
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
N +Y +G Q+GQLGLGT
Sbjct: 258 LTEN--AVYTFGLGQFGQLGLGT 278
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 25/245 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + P + V I P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKNVSNVCVPQQ-----VTIGKP 191
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V ++ G H+ +T + + FG G+ G +++ I
Sbjct: 192 VSW-------ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+S + ++D G ++ +G+ +G++ + + + C R + VA GG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGG- 358
Query: 241 ACTML 245
C M+
Sbjct: 359 -CHMV 362
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 33/276 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++CG+ T S + LF G +S+ QLG + NP + S
Sbjct: 77 KVMQVSCGHSHTCAIIDSGE----LFSWGDSSEGQLGINSNGSHYNPQLVNFS------D 126
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+K +T + ++ G HT+ + N +FG+ GQ G G ++ Q K F N
Sbjct: 127 LKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTG---NQNKQYKPFLLNSLS- 182
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIV 181
+I+ CG HTLFL ESG+VYSCG +GQ G GH N +P LV E+E I
Sbjct: 183 ---QIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVL-ELEHSFIK 238
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
K+ + A++D +++ +G S+ G Q P+++ C+G + +++ G
Sbjct: 239 KIFAGSHSA-AITDANEIYFFGKSQLG-------QFLYPQLVRICQG--DVNEISIGNHF 288
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLI 274
+ +G VYSWG G LGQG R + P+L+
Sbjct: 289 GVAVTYDGKVYSWGINQQGQLGQGDSDVRII-PSLV 323
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I LA G HT + N +T G+N+ G+ G G ++ Q + ++ L K+M
Sbjct: 24 IHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIG---QQSLQNSFQPQLVSALSKYKVMQ 80
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVD 188
CG HT + +SG+++S G ++GQ G+ + P LV +++G I + V
Sbjct: 81 VSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKG--INTFVTDVS 138
Query: 189 C----VLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
C +AV G V +G+ + GQ+ + ++ + P +L+ +S+I+ V G
Sbjct: 139 CGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLN---SLSQIIKVKCGFYHTL 195
Query: 244 MLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L++ G VYS G G LGQG P L+ L +H F ++ + AG +
Sbjct: 196 FLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLV---LELEHSF-----IKKIFAGSHS- 246
Query: 301 GAITNFGHLYMWGKNQYGQL 320
AIT+ +Y +GK+Q GQ
Sbjct: 247 AAITDANEIYFFGKSQLGQF 266
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 89 AFTFGNNSFGQCGRGIVQEED---YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
A + GN FG+ G G V +D ++ + H + LE + G H++FL G
Sbjct: 27 ALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGGF 86
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++CG GQ G G H + LV ++E +V++++ + L V G V+ +G
Sbjct: 87 VFACGLNNYGQLGHGKHSAHVPEAALVDLDVE---VVRVAAGNNHTLCVDVDGGVWAFGK 143
Query: 205 SEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLG 260
+E GQ+ ++ PR + +IVDVASG L+++ VYSWG G+LG
Sbjct: 144 NEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLG 203
Query: 261 QGPKV------SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G + R+ K P L + ++KV S+ AG + G L+ WG+
Sbjct: 204 HGSETWNEGWFYRTAKTVAKPRLL----RALSETKVRSIAAGHMHSACVDERGELFTWGQ 259
Query: 315 NQYGQLG 321
++ QLG
Sbjct: 260 GRFNQLG 266
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 57/337 (16%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F CGLN+ QLG+ G V + L V ++ +A G HT+ + +
Sbjct: 87 VFACGLNNYGQLGH------GKHSAHVPEAALVDLDV-----EVVRVAAGNNHTLCVDVD 135
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
G + FG N GQ G G+ + +Q + LEG KI+D G +H+L L+E +V
Sbjct: 136 GGVWAFGKNEGGQLGTGL-DLDGFQPRRI--ETLALEG-KIVDVASGAEHSLALSEDARV 191
Query: 147 YSCGWGADGQTGLGHLNNQE-----------TPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
YS G ADG G G E P L+R E ++ +++ V +
Sbjct: 192 YSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSE-TKVRSIAAGHMHSACVDE 250
Query: 196 KGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+G++F WG + Q+ ++ + + P+ + R V + G T+ + V
Sbjct: 251 RGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTL----RFVHQVTCGGLHTLASTSAGVV 306
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG +G LG G S S + IP + + + + L AG ++N G L
Sbjct: 307 SWGANQHGELGHG---SNSDAKSAIPKPI----KLSSRG-WSKLSAGWKHSAGVSNDGKL 358
Query: 310 YMWG------------KNQYGQLGLGTVEDQPFPLKV 334
+ WG + GQLGLG D P +V
Sbjct: 359 FAWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEV 395
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ A G AH+I + F G N++GQ G G + + DL+ E ++
Sbjct: 67 DVTQCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAA-----LVDLDVE-VV 120
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAV 187
G +HTL + G V++ G GQ G G L+ + + +EG +IV ++S
Sbjct: 121 RVAAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEG-KIVDVASGA 179
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS------------ESEMQISTPRVLSQCKGVSRIVDV 235
+ LA+S+ V+ WG S G + + ++ PR+L + +++ +
Sbjct: 180 EHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLL-RALSETKVRSI 238
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A+G +++ G +++WG G Q + S+ + P ++ + V +
Sbjct: 239 AAGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSV------DTLRFVHQVTC 292
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ----PFPLKVAVGG 338
G A T+ G + WG NQ+G+LG G+ D P P+K++ G
Sbjct: 293 GGLHTLASTSAG-VVSWGANQHGELGHGSNSDAKSAIPKPIKLSSRG 338
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIV 82
N +++ CG NS QLG P+ + P P++ ST I ++ G+ H++
Sbjct: 197 NHRVYSCGDNSRGQLGQKSPQS-----------TKRPEPIQALSTVHIDLVSCGKEHSVA 245
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ FT+G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 246 VCHQGRVFTWGAGSEGQLGIGESKEISFMPT----KINSLAGIKIIQVSCGHYHSLALSE 301
Query: 143 SGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G GQ GLG +L +Q +P V+ +EG + ++++ A+S G FG
Sbjct: 302 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGTSFG 360
Query: 202 WGNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
WGN+ GQ++ S + QI P + K ++ +V ++ G ++L ++G V+++G
Sbjct: 361 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN-VVYISCGYEHTSVLTEDGQVFTFG 417
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A+G H++++ N ++ G+NS GQ G ++ Q I L I CG
Sbjct: 185 ASGERHSLLLFSNHRVYSCGDNSRGQLG-----QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
++H++ + G+V++ G G++GQ G+G + G +I+++S LA+
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299
Query: 194 SDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
S+ G VF WG++ GQ + + ++P+ + +G+ + VA+GG+ L+ G
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP-LAQVAAGGTHSFALSLMGTS 358
Query: 252 YSWGYGLLGQ 261
+ WG GQ
Sbjct: 359 FGWGNNRSGQ 368
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G K++ A G+ H+L L + +VYSCG + GQ G + + P ++ + I +
Sbjct: 178 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-LSTVHIDLV 236
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + +AV +G VF WG GQ I ES+ P ++ G+ +I+ V+ G
Sbjct: 237 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQVSCGHYH 295
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G + P + S + P ++V AG
Sbjct: 296 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-----EGIPLAQVA---AGGT 347
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
A++ G + WG N+ GQL L
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALS 372
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ ++ ++F G N QLG + + V S IPL
Sbjct: 284 IKIIQVSCGHYHSLALSEDG----QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL 339
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR--GIVQEEDYQGKWFCHNI 119
+A G H+ ++ +F +GNN GQ +E+ Y+ H+I
Sbjct: 340 A---------QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKP----HSI 386
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L+ ++ CG +HT LTE G+V++ G + Q + + P L+ G
Sbjct: 387 GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG 440
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 42/274 (15%)
Query: 69 QIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
Q++ +A+G AH+++IT +++G N GQ G G ++ D I L+GE
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVP-----KLIESLKGEV 194
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ A CG++HTL LTE+G VY+ G GQ GLG+ P + G+ I K++
Sbjct: 195 FVHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACG 253
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR------------ 231
+ + + KG+++ +G EYGQ+ S+ + R+ C+ ++R
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDG 313
Query: 232 ---------IVDVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLF 279
+ D+A G + +L+ + V+SW GYG LG + M P L+ LF
Sbjct: 314 QILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD-EMVPRLV--KLF 370
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 371 ---DFPGRGAAQIYAGATCSF-AVSEMGGLFFWG 400
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 45/297 (15%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
ACG T+ T+ N ++ G N QLG GN + V S P + +
Sbjct: 199 ACGRNHTLALTE----NGSVYAFGENKMGQLGL------GNKTDAVPS----PAQILYNG 244
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFCHNIA 120
I +A G ++++ ++FG +GQ G Q +Y + IA
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 121 D-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+E K + D CG +H+L L +V+S G+G G+ G ++ P
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
Query: 169 CLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
LV+ + G ++ + C AVS+ G +F WG + + S P+ +
Sbjct: 365 RLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGAT-----NTSRDSTMYPKAVQDLC 419
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKPTLIPSTLFG 280
G ++ +A G S+ + DE + SWG +G LG G ++S TL G
Sbjct: 420 GW-KVRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDNKAKSSTTAQEVKTLDG 474
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVAS 237
R V S L ++ +G ++ WG ++ GQ+ ++ +I P+++ KG V A
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKG-EVFVHAAC 200
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G + L + G VY++G +GQ + K +PS + P +KV A
Sbjct: 201 GRNHTLALTENGSVYAFGENKMGQ---LGLGNKTDAVPSPAQILYNGQPITKV----ACG 253
Query: 298 CTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLG 278
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 231 RIVDVASGGSAC--TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
++ VASG A ++ EG ++SWG G LG G + R P LI S
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG-DIKRIDVPKLIESL-------- 190
Query: 286 PKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
K E + C A+T G +Y +G+N+ GQLGLG D P P ++ GQ
Sbjct: 191 ---KGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQ 245
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 23/258 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T L+ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTPQHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI +M P ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+Y +G G LG + +S P L+P P+ ++ G + N
Sbjct: 211 LYIFGEPENGKLGLPYELLSNHRIPQLVPEI--------PEKVIQVACGGEHSVVLTEN- 261
Query: 307 GHLYMWGKNQYGQLGLGT 324
LY +G ++GQLGLGT
Sbjct: 262 -DLYTFGLGKFGQLGLGT 278
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 36/321 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYVFGSNNWGQLGLGSKSAVSKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N GQ G G D + + H I+ +
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLG-----DTEERTTFHLISFFTPQH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL + N C+ G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNA---CVPHQVTTGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ G+++ +G E G++ +S R+ + +++ VA GG +
Sbjct: 198 GYYHSAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVV 257
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L + L Y++G +G LG G + + +P ++ S + G+ K+ + G
Sbjct: 258 LTENDL-YTFGLGKFGQLGLGTFLFETSEPRVVES-IKGR-------KISYISCGENHAA 308
Query: 302 AITNFGHLYMWGKNQYGQLGL 322
+T+ G +Y +G ++G+LGL
Sbjct: 309 LLTDTGLMYTFGDGRHGKLGL 329
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P EL +S RIP V
Sbjct: 195 ISCGYYHSAFVTT--DGELYIFGEPENG----------KLGLPYEL-LSNHRIPQLVPEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G H++V+T+N+ +TFG FGQ G G E + + + ++G K
Sbjct: 242 PEKVIQVACGGEHSVVLTEND-LYTFGLGKFGQLGLGTFLFETSEPRV----VESIKGRK 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTG--LGHLNNQETPCL 170
I CG++H LT++G +Y+ G G G+ G L + NQ P L
Sbjct: 297 ISYISCGENHAALLTDTGLMYTFGDGRHGKLGLELENFTNQFIPIL 342
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ +S P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F P+ K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNDEGQLGLGDTEERT--------TFHLISFFTPQHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL + + P +V G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTG 189
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAVSKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ +S P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKL 327
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 28/317 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G N LG+ K + LV S + +I A G H + + D
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANV---------KIVQAAIGAWHCLAVDD 108
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD----LEGEKIMDAVCGQDHTLFLT 141
A+ +G N +GQCG ++E G+ +I + + G H++ LT
Sbjct: 109 QGRAYAWGGNEYGQCGEEPSKDE--TGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V++ WG G + P V+G +E R++ + + + LA+ + G ++
Sbjct: 167 REGYVWT--WGQPWPPG--DIKQISVPVRVQG-LENVRLIAVGAFHN--LALKEDGTLWA 219
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
WGN+EYGQ+ + Q + + Q +VD+A+GG T L +EG VY WG G G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + P + + G A+T G ++ +G+ +G+LG
Sbjct: 280 LGFGDNDKSSKMLPQKV----NLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Query: 322 LG--TVEDQPFPLKVAV 336
G QP L + +
Sbjct: 336 YGRKVTTGQPLELPIHI 352
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E++ + LE + V G ++L + + GK+++
Sbjct: 8 IAWGSGEDGQLGLGTDEEKE-----LASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTW 62
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + TP LV+ + +IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPPETKTESTPSLVK-SLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQISESEMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
YGQ E + T R + +C + VA+GG+ +L EG V++WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
P +K +P + G V + G A+ G L+ WG N+YGQ
Sbjct: 177 ---PWPPGDIKQISVPVRVQGL------ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227
Query: 320 LGLGTVEDQPFPLKV 334
LG G + + +P+ V
Sbjct: 228 LGTGDTQPRSYPIPV 242
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 69 QIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
Q++ +A+G AH+++IT +++G N GQ G G ++ D I L+GE
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVP-----KLIESLKGEV 194
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ A CG++HTL LTE+G VY+ G GQ GLG+ P + G+ I K++
Sbjct: 195 FVHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACG 253
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR------------ 231
+ + + KG+++ +G EYGQ+ S+ + R+ C+ ++R
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDG 313
Query: 232 ---------IVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSR-SMKPTLIPSTLFG 280
+ D+A G + +L+ + V+SWG+G G+ G R M P L+ LF
Sbjct: 314 QILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLV--KLF- 370
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 371 --DFPGRGAAQIYAGATCSF-AVSEMGGLFFWG 400
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 45/297 (15%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
ACG T+ T+ N ++ G N QLG GN + V S P + +
Sbjct: 199 ACGRNHTLALTE----NGSVYAFGENKMGQLGL------GNKTDAVPS----PAQILYNG 244
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFCHNIA 120
I +A G ++++ ++FG +GQ G Q +Y + IA
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 121 D-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+E K + D CG +H+L L +V+S G+G G+ G ++ P
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
Query: 169 CLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
LV+ + G ++ + C AVS+ G +F WG + + S P+ +
Sbjct: 365 RLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGAT-----NTSRDSTMYPKAVQDLC 419
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKPTLIPSTLFG 280
G ++ +A G S+ + DE + SWG +G LG G ++S TL G
Sbjct: 420 GW-KVRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDNKAKSSTTAQEVKTLDG 474
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVAS 237
R V S L ++ +G ++ WG ++ GQ+ ++ +I P+++ KG V A
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKG-EVFVHAAC 200
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G + L + G VY++G +GQ + K +PS + P +KV A
Sbjct: 201 GRNHTLALTENGSVYAFGENKMGQ---LGLGNKTDAVPSPAQILYNGQPITKV----ACG 253
Query: 298 CTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLG 278
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 231 RIVDVASGGSAC--TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
++ VASG A ++ EG ++SWG G LG G + R P LI S
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG-DIKRIDVPKLIESL-------- 190
Query: 286 PKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
K E + C A+T G +Y +G+N+ GQLGLG D P P ++ GQ
Sbjct: 191 ---KGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQ 245
>gi|269793976|ref|YP_003313431.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096161|gb|ACZ20597.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 737
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 142/333 (42%), Gaps = 33/333 (9%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D +++ GLNS QLG P+ + M+ V ++++ +A G H++
Sbjct: 158 DSKGQIWAWGLNSSGQLGNGTRASSTTPVPVDMTGVMA-------NSEMVAVAAGARHSL 210
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG-------- 133
+ F +G N FG+ G G + + + L E+ ++ + G
Sbjct: 211 ALDSEGNVFAWGRNGFGELGDGTRVDRSTPVR-----VGGLLAEQPVERISGGGNTTDAG 265
Query: 134 -QDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
Q ++L L +G+VY+ G G G+ G+G + TP LV G I + IV S + +
Sbjct: 266 IQGNSLALGANGRVYTWGAGERGRLGIGTSPASIATPALVGGLIADQHIVDASFGTNNAV 325
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV---SRIVDVASGGSACTMLNDE 248
+S G +F WG+ YG + S V GV I V +G +
Sbjct: 326 VLSSDGRLFSWGDGSYGALGNGTTTTSASPVAVTMTGVLSGVSISQVDAGQLGSIARSVT 385
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G +++WG+ G +G G S S PT + G + +++ AGP + A+
Sbjct: 386 GELFTWGWNNAGQIGNG-TTSNSTVPTRVD---MGALEALGNRPIQA-SAGPAFYMALGA 440
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
G L WG N GQLG GT + P+ V V G
Sbjct: 441 DGRLAAWGLNTSGQLGAGTNVNASRPVAVRVDG 473
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G + +V++ + F++G+ S+G G G + L G I GQ
Sbjct: 320 GTNNAVVLSSDGRLFSWGDGSYGALGNGTTTTSASPVAVTMTGV--LSGVSISQVDAGQL 377
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV-RGEIE--GERIVKLSSAVDCVLA 192
++ + +G++++ GW GQ G G +N P V G +E G R ++ S+ +A
Sbjct: 378 GSIARSVTGELFTWGWNNAGQIGNGTTSNSTVPTRVDMGALEALGNRPIQASAGPAFYMA 437
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV---SRIVDVASGGSACTM-LNDE 248
+ G + WG + GQ+ ++ V + GV + I+ V + S T+ L D+
Sbjct: 438 LGADGRLAAWGLNTSGQLGAGTNVNASRPVAVRVDGVMVGANIIQVTNSSSGTTLALADD 497
Query: 249 GLVYSW 254
G V++W
Sbjct: 498 GRVFAW 503
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
LS R +A+G S L+ +G +++WG GQ +R+ T +P + G
Sbjct: 135 LSTAASTGRDTHIAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPVDMTG-- 192
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
S++ ++ AG A+ + G+++ WG+N +G+LG GT D+ P++V
Sbjct: 193 -VMANSEMVAVAAGARHSLALDSEGNVFAWGRNGFGELGDGTRVDRSTPVRV 243
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 11/180 (6%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G S LG +P+ + M+ V I + G+ +I +
Sbjct: 332 RLFSWGDGSYGALGNGTTTTSASPVAVTMTGVL-------SGVSISQVDAGQLGSIARSV 384
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
FT+G N+ GQ G G + + L G + + A G + L G+
Sbjct: 385 TGELFTWGWNNAGQIGNGTTSNSTVPTRVDMGALEAL-GNRPIQASAGPAFYMALGADGR 443
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
+ + G GQ G G N P VR G + G I++++ S+ LA++D G VF W
Sbjct: 444 LAAWGLNTSGQLGAGTNVNASRPVAVRVDGVMVGANIIQVTNSSSGTTLALADDGRVFAW 503
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIV 82
N +++ CG NS QLG P+ + P P++ ST I ++ G+ H++
Sbjct: 197 NHRVYSCGDNSRGQLGQKSPQS-----------TKRPEPIQALSTVHIDLVSCGKEHSVA 245
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ FT+G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 246 VCHQGRVFTWGAGSEGQLGIGESKEISFMPT----KINSLAGIKIIQVSCGHYHSLALSE 301
Query: 143 SGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G GQ GLG +L +Q +P V+ +EG + ++++ A+S G FG
Sbjct: 302 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGTSFG 360
Query: 202 WGNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
WGN+ GQ++ S + QI P + K ++ +V ++ G ++L ++G V+++G
Sbjct: 361 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN-VVYISCGYEHTSVLTEDGQVFTFG 417
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A+G H++++ N ++ G+NS GQ G ++ Q I L I CG
Sbjct: 185 ASGERHSLLLFSNHRVYSCGDNSRGQLG-----QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
++H++ + G+V++ G G++GQ G+G + G +I+++S LA+
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299
Query: 194 SDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
S+ G VF WG++ GQ + + ++P+ + +G+ + VA+GG+ L+ G
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP-LAQVAAGGTHSFALSLMGTS 358
Query: 252 YSWGYGLLGQ 261
+ WG GQ
Sbjct: 359 FGWGNNRSGQ 368
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G K++ A G+ H+L L + +VYSCG + GQ G + + P ++ + I +
Sbjct: 178 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-LSTVHIDLV 236
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + +AV +G VF WG GQ I ES+ P ++ G+ +I+ V+ G
Sbjct: 237 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQVSCGHYH 295
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G + P + S + P ++V AG
Sbjct: 296 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-----EGIPLAQVA---AGGT 347
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
A++ G + WG N+ GQL L
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALS 372
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ ++ ++F G N QLG + + V S IPL
Sbjct: 284 IKIIQVSCGHYHSLALSEDG----QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL 339
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR--GIVQEEDYQGKWFCHNI 119
+A G H+ ++ +F +GNN GQ +E+ Y+ H+I
Sbjct: 340 A---------QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKP----HSI 386
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L+ ++ CG +HT LTE G+V++ G + Q + + P L+ G
Sbjct: 387 GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG 440
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKL 327
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKL 327
>gi|76155989|gb|AAX27234.2| SJCHGC04649 protein [Schistosoma japonicum]
Length = 208
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV----LSQC------- 226
ER+ LSS D VLA+++ +F WGN+EYGQI + + P L QC
Sbjct: 5 ERVCLLSSRGDTVLALTESNKLFAWGNNEYGQIWPLDQHVQVPDPIHLNLDQCIVPAESN 64
Query: 227 -----KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
+ + +A GS C ++N G V+ WG+G +G GPKV+ S +PTLIP LF
Sbjct: 65 LCSDNVHIGEVQSIACAGSMCCIVNKIGQVFVWGFGCIGLGPKVTHSPRPTLIPPGLFIP 124
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ--LGLG 323
N + + ++AG F + G L+ WG + G LGLG
Sbjct: 125 AVVNSELCINYVVAGLHHFIVQSVDGLLWSWGAPRGGLHCLGLG 168
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 146/333 (43%), Gaps = 26/333 (7%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +ACG T+ + N ++F G +LG + + PL+ + +F
Sbjct: 408 IRTVACGTEHTLAVSV----NGEMFSWGCGRGGKLGLKNILDRYMPLK-IGAF------- 455
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ I ++ H+ +T++ +TFG + G E+ Q +
Sbjct: 456 --ENVNITFVSCNELHSASVTESGELYTFGRSG---PHLGYTTEDRKQA--VPRKVDFST 508
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
KI CG + T+ L G++YS G GQ G GH N+ E P L++ + G RI K+
Sbjct: 509 ANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFNDIEEPYLIK-HLNGVRISKV 567
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSAC 242
S V AV+ GDV+ WG++E+GQ+ +++ P I D+ GGS
Sbjct: 568 SCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHT 627
Query: 243 TMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+L+ G+VY +G G GQ G V+++ P L +K+ + G
Sbjct: 628 VVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCIL----SMPNNTKIAKVDCGIEHTA 683
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G LY WG G+LG G +D+ P V
Sbjct: 684 AVTESGCLYTWGNGSRGRLGHGDHQDRYVPTLV 716
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 18/247 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+T+G + G G G EE F + L G I CG +HTL ++ +G+++S
Sbjct: 376 YTWGASPKGVLGHGEETEE-----LFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSW 430
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS--EY 207
G G G+ GL ++ ++ P L G E I +S +V++ G+++ +G S
Sbjct: 431 GCGRGGKLGLKNILDRYMP-LKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGPHL 489
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVS 266
G +E Q + PR + ++I V+ G LN EG +YS+G GQ G
Sbjct: 490 GYTTEDRKQ-AVPRKVD-FSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHF 547
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
++ + L G ++ + G GA+T G +++WG N++GQLG +E
Sbjct: 548 NDIEEPYLIKHLNG-------VRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLE 600
Query: 327 DQPFPLK 333
P +
Sbjct: 601 AHDIPFE 607
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 35/253 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG---YHDPRKKGNPLELVMSFVRI 59
KI ++CG FT+ + L+ G N QLG ++D +
Sbjct: 511 KIKAVSCGLEFTIALNSEGE----LYSFGKNDCGQLGAGHFND--------------IEE 552
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P +KH + +I ++ G H +T N + +G+N FGQ G ++ D +
Sbjct: 553 PYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFE----A 608
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI--- 175
+ E+I D CG HT+ L+ +G VY G G GQ G+ NQ +P + I
Sbjct: 609 PSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVA--VNQTSPYITNPCILSM 666
Query: 176 -EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
+I K+ ++ AV++ G ++ WGN G++ + Q L + ++
Sbjct: 667 PNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQDRYVPTLVESLAYKQVQS 726
Query: 235 VASGG---SACTM 244
+A G +AC +
Sbjct: 727 IACGAYHTAACVI 739
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 25/240 (10%)
Query: 102 RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH 161
RGIV E C I+D + + CG +H++FL E G+VY+CG GQ LGH
Sbjct: 66 RGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQ--LGH 115
Query: 162 LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQIST 219
P + G + + IV ++ LA+SD+G +F WG GQ + +E ++
Sbjct: 116 EREGNKPEQI-GALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAV 174
Query: 220 PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
PR++ + + I+ V+ G C L +G ++WG +G LG G + P + S
Sbjct: 175 PRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 233
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ P ++V AG A++ G ++ WG N GQLGL ED+ P V +
Sbjct: 234 L-----EGIPLAQVA---AGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKL 285
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 83 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 129
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 130 ---DQNIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 182
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 183 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 241
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VF WG + GQ+ S+ + + ++V ++ G
Sbjct: 242 VAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 301
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 302 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 353
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 354 LAFVPSSGLIYAFGCGARGQLGTG 377
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 83 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQNIVH 135
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 136 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 194
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 195 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 252
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V++WG GQ + + L KV + G +T
Sbjct: 253 SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQ------KVVYISCGEEHTAVLTK 306
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 307 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 335
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+F G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 258 VFAWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 306
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 307 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 361
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 362 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 390
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 133/313 (42%), Gaps = 43/313 (13%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
GLN+ QLG P+ V ++ ++ +A G HT +T + G +
Sbjct: 436 GLNNSGQLGDGSDTDS-----------STPVAVSGLASGVETIAAGGWHTCALTSSGGVW 484
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV----CGQDHTLFLTESGKV 146
+G N+ GQ G G ++I + + V G HT LT SG V
Sbjct: 485 CWGRNNSGQLGDGST----------IYHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGV 534
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
+ G+ GQ G G ++ TP V G G ++ C L + G V+ WG +
Sbjct: 535 WCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCAL--TSSGGVWCWGANF 592
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ + + +TP +S S + +A+GG L G V+ WG YG LG G
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLP--SGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDG 650
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+RS P + G S V ++ AG A+T+ G ++ WG N YGQLG
Sbjct: 651 TTTNRS-----TPGAVSGL-----PSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGD 700
Query: 323 GTVEDQPFPLKVA 335
GT ++ P V+
Sbjct: 701 GTTTNRSTPGAVS 713
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 124/282 (43%), Gaps = 30/282 (10%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V + + +A G HT +T + G + +G N GQ G G + +
Sbjct: 505 PVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTP-----VAV 559
Query: 120 ADL-EGEKIMDAVCGQDHTLFLTESGKVYSCGWGA--DGQTGLGHLNNQETPCLVRGEIE 176
+ L G ++ A G+ HT LT SG V+ WGA DGQ G G N+ TP V G
Sbjct: 560 SGLTSGVTVIAA--GRFHTCALTSSGGVWC--WGANFDGQLGDGTTTNRTTPVAVSGLPS 615
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDV 235
G + C L + G+V+ WG++ YGQ+ + + STP +S S + +
Sbjct: 616 GVTAIAAGGWHTCAL--TSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLP--SGVTAI 671
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A+G L G V+ WG YG LG G +RS P + G S V +
Sbjct: 672 AAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRS-----TPGAVSGL-----PSGVTA 721
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ AG A+T G + WG N GQLG G + P+ V
Sbjct: 722 IAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 763
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 23/282 (8%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R+ P + +A G AHT +T + G +G N FGQ G G G
Sbjct: 43 RLHTSSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGA---- 98
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEI 175
++ L + G HT LT SG V WGA+ GQ G G + TP V G
Sbjct: 99 -VSGLP-SGVTAIAAGNYHTCALTGSGGVRC--WGANYSGQLGNGLTFGRSTPGAVSGLP 154
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVD 234
G + +++ D A+ G V WG++ YGQ+ + + TP +S S +
Sbjct: 155 SG--VTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLP--SGVTA 210
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+A+GG L G V+ WGY GQ G + + T P+ + G S + ++
Sbjct: 211 IAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRST--PAAVGGL-----PSGMTAI 263
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AG A+ + G ++ WG+N GQLG G+ D P+ V+
Sbjct: 264 AAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVS 305
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 115/280 (41%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V + + +A G HT +T + + +G N FGQ G G +
Sbjct: 301 PVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAA-----V 355
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G HT L SG V+ G GQ G G + TP V G G
Sbjct: 356 SGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVT 414
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ C L S G V+ WG + GQ+ + S+ STP +S S + +A+G
Sbjct: 415 AIAAGGLHTCALMSS--GGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLA--SGVETIAAG 470
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G L G V+ WG G LG G + + P + G S V ++ A
Sbjct: 471 GWHTCALTSSGGVWCWGRNNSGQLGDGSTIYH-----ITPVAVSGL-----PSGVTAIAA 520
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T G ++ WG N GQLG GT D+ P+ V+
Sbjct: 521 GDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVS 560
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V + ++ +A G HT + + G + +G N+ GQ G G +
Sbjct: 352 PAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAA-----V 406
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G HT L SG V+ G GQ G G + TP V G G
Sbjct: 407 SGLP-SGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVE 465
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ C L + G V+ WG + GQ+ + S + TP +S S + +A+G
Sbjct: 466 TIAAGGWHTCAL--TSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLP--SGVTAIAAG 521
Query: 239 GSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
L G V+ WGY L LG G RS P + G S V + A
Sbjct: 522 DYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRS-----TPVAVSGL-----TSGVTVIAA 571
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T+ G ++ WG N GQLG GT ++ P+ V+
Sbjct: 572 GRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVS 611
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 27/284 (9%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R P+ V + + +A G HT +T + + +G N +GQ G G
Sbjct: 196 RTPVAVSGLPSGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSR-------S 248
Query: 118 NIADLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
A + G + G HT L SG V+ G GQ G G + TP V G
Sbjct: 249 TPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLP 308
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVD 234
G + C L + G+V+ WG + +GQ+ + STP +S S +
Sbjct: 309 SGVTAIAAGDYHTCAL--TGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLP--SGVET 364
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G L G V+ WG G LG G +RS P+ + G S V
Sbjct: 365 IAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARS-----TPAAVSGL-----PSGVT 414
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ AG A+ + G ++ WG N GQLG G+ D P+ V+
Sbjct: 415 AIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVS 458
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 115/280 (41%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V + + +A G HT + + G + +G N+ GQ G G + D +
Sbjct: 403 PAAVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDG--SDTDSSTPVAVSGL 460
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
A + G HT LT SG V+ G GQ G G TP V G G
Sbjct: 461 A----SGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVT 516
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ C L + G V+ WG + GQ+ + + STP +S S + +A+G
Sbjct: 517 AIAAGDYHTCAL--TGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLT--SGVTVIAAG 572
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
L G V+ WG G LG G +R+ P + G S V ++ A
Sbjct: 573 RFHTCALTSSGGVWCWGANFDGQLGDGTTTNRT-----TPVAVSGL-----PSGVTAIAA 622
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T+ G ++ WG N YGQLG GT ++ P V+
Sbjct: 623 GGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVS 662
>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 529
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ACG G T+ +S + LF G S+ +LG D + +P
Sbjct: 260 RVRDLACGLGHTLALMESGE----LFAWGNGSNGRLGLGDTNDRPES-------CSTSVP 308
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V+ +H+ G +H++ ++ + A+T+G N+ GQCG G ++ W I
Sbjct: 309 VR-----FRHIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQ-----WTIQEIESF 358
Query: 123 ----EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT--------GLGHLNNQETPCL 170
E E + A G +HTLF T SG+VYSCG G G G + + P L
Sbjct: 359 EDGEEAECVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTL 418
Query: 171 VRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKG 228
++ E E IVK++ D LAVS G V+ WG+ G++ E TP ++ +G
Sbjct: 419 IQSLEDAREEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEG 478
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLI 274
+ D +G L + ++S G G LG G +R +PT I
Sbjct: 479 -RHVKDAKAGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTRK-RPTKI 525
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I L+T H+I IT A +GN + G G +E Y + H L+G ++
Sbjct: 210 RIDSLST---HSIAITAKGDAMAWGNGDKYRLGHGSSTKE-YTPRMIEH--LRLKG-RVR 262
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
D CG HTL L ESG++++ G G++G+ GLG N++ C + R +
Sbjct: 263 DLACGLGHTLALMESGELFAWGNGSNGRLGLGDTNDRPESCSTSVPV---RFRHIFCGAS 319
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKG-VSRIVDVASGGSACTML 245
L +S G + WG + GQ Q + + S G + V A+GG T+
Sbjct: 320 HSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEHTLF 379
Query: 246 ND-EGLVYSWGYG-----------LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+ G VYS G G +LG G R +KPTLI Q + + ++ +
Sbjct: 380 STASGRVYSCGCGYKDSRRAGIPPVLGHG-DCDRRLKPTLI------QSLEDAREEIVKV 432
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A++ G +Y WG G+LG G E P V
Sbjct: 433 ACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLV 473
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 126/285 (44%), Gaps = 30/285 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + IACG T T + K++ G ++ +LG G PL +V +P
Sbjct: 553 MSVVFIACGKDSTAALTDTG----KVYTWGKSAQGKLGL----GSGKPLAIV-----VPQ 599
Query: 62 PVKHPSTQIK-HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
V+ S+ + ++ GR H TD F +G+N+FGQ G I Y + I
Sbjct: 600 LVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLG--IPHISSYMPDPY--EIT 655
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIE 176
L I CG HTL T +G V SCG G GQ G G + +T + +E
Sbjct: 656 SLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVE 715
Query: 177 G---ERIVKLSSAVDCVLAVSDKGDVFGWGN-SEYGQISESEMQISTPRVLSQCKGVSRI 232
G IVK+S+ + A+++KG +F WG EY ES + PR + + R+
Sbjct: 716 GFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKI-RV 774
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
VDV+ G S L+ GL YSWG G LG G R P I
Sbjct: 775 VDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPI 819
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 26/227 (11%)
Query: 125 EKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPC----------LV 171
++ VC G+ HTLFL+ G V SCG GQ G+G H+ ++ TP +
Sbjct: 121 RNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKL 180
Query: 172 RGEIEG-ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGV 229
+ I+ IV +++ LA++D G +F WG+ +G++ S+ +PR ++ +
Sbjct: 181 QAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQN- 239
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPK-VSRSMKPTLIPSTLFGQHQFNPK 287
S++V +A G + G V++WG GL GQ G K V P L S K
Sbjct: 240 SKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASL--------RK 291
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G I G LY G N +GQLGLG D+ P V
Sbjct: 292 CGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLV 338
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 151 WGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
WG D GQ G+ L +P L++ + IV +S+ D V+D G ++ G SE+G
Sbjct: 1615 WGEDTCGQLGIRGLQAARSPSLMQ-SLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHG 1673
Query: 209 QISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG--PKVS 266
++ M + V + +I+ VA G C L +E VY+WG G G +
Sbjct: 1674 RLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTN 1733
Query: 267 RSMKP----TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
++P +L ++ G H AG A++ +G L+MWGKN GQLGL
Sbjct: 1734 DVLEPQELSSLAACSIIGVH------------AGGFHSAALSQYGDLFMWGKNSNGQLGL 1781
Query: 323 GT---VEDQP 329
GT ED P
Sbjct: 1782 GTTSAAEDSP 1791
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 10/252 (3%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+T+G FG+ G G+ + I L ++ CG+D T LT++GKVY+
Sbjct: 518 YTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTW 577
Query: 150 GWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G A G+ GLG P LV+ ++ + ++S + +D F WG++ +
Sbjct: 578 GKSAQGKLGLGSGKPLAIVVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTF 636
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ I + P ++ + + I +A GG + + G V S G +G LG G
Sbjct: 637 GQLGIPHISSYMPDPYEITSLRE-ANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHG 695
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
S + +P F S + + AG + AITN G L+ WGK QLG
Sbjct: 696 DYESLTALSKTLPYFKKIVEGFG-DSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGH 754
Query: 323 GTVEDQPFPLKV 334
+ +++ +P +V
Sbjct: 755 ESSKNEAYPREV 766
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 26/318 (8%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS-TQIKHLATGRAHT 80
+ ++ +GCG+N G+H P E + SF PS T+I +A G H+
Sbjct: 1178 EYHIYTWGCGVNGRLGHGFHT--GYSTPQE-ITSF---------PSNTKIVEVACGCEHS 1225
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ + + G + +G GQ G ++ D + N + +L+ I+ CG+ H
Sbjct: 1226 LARSFDGGVYAWGAGDRGQLGS--LENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHN 1283
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
+ LT +V S G G GQ GL H ++ TP +V+ ++G K+ A+ + G
Sbjct: 1284 MTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKA-LDGRAPCKILCGGWHSAAILESG 1342
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + YGQ+ + + S PRV + ++ G + ++ V++ G
Sbjct: 1343 KILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGS 1402
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
+ GQ S +P ++ + N K+ + + AG A++ FG ++ WG +
Sbjct: 1403 NIDGQLGLDDPSRTGKNVPVSI---EELNGKN-ICQVAAGDQHSLALSVFGEVWSWGGSP 1458
Query: 317 YGQLGLGTVEDQ--PFPL 332
+GQLG T+ D+ P PL
Sbjct: 1459 FGQLGHETITDKLAPTPL 1476
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 30/253 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA GY ++ + K+F G S +LG +P V S
Sbjct: 190 IVGIAAGYYHSLALNDTG----KIFSWGSGSWGKLGIGSDANAESP-RFVASL------- 237
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-ADL 122
++++ H+A G HT IT +T+G GQ G V+EE F + A L
Sbjct: 238 --QNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEE------FSPRLNASL 289
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
CG DHTL + SG++YS G GQ GLG ++ P LV G E+++
Sbjct: 290 RKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG-FANEKVID 348
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
+ + +A+++ G VF +GN E+E ++ PR ++ I+ VA
Sbjct: 349 IDAKGCRSIALTNTGKVFAFGN-------ETEPHLNRIPRFVAGLPKSDLIIAVARTAHF 401
Query: 242 CTMLNDEGLVYSW 254
++D G ++ W
Sbjct: 402 DFAISDTGQLFRW 414
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 115/279 (41%), Gaps = 30/279 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+T I H++ + +TD+ + G + G+ G G + + I L K
Sbjct: 1642 ATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVE-----IRSLNTVK 1696
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVK 182
IM CG H L LTE +VY+ G G G G+ + N+ QE L I G
Sbjct: 1697 IMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGG 1756
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
SA A+S GD+F WG + GQ + + +P +S GV V + + S
Sbjct: 1757 FHSA-----ALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHS 1811
Query: 241 ACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
A M +++ G G LG G V RS TL Q + S G
Sbjct: 1812 AVLMQVTSPNLFTCGLNANGQLGLGDFVDRS---TLTAVDALDDRQ------IVSASCGA 1862
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGL--GTVEDQPFPLKV 334
A++ +G L WG + GQLGL G +D P+++
Sbjct: 1863 AHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQL 1901
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 143/328 (43%), Gaps = 33/328 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ACG ++ +S D + +G G QLG + N + +++ P P
Sbjct: 1214 KIVEVACGCEHSLA--RSFDGGVYAWGAG--DRGQLGSLE-----NFDCVKINYAFNPQP 1264
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V + I +A GR H + +T ++G FGQ G + K +
Sbjct: 1265 VLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGL-----DHNLSKGTPQMVKA 1319
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGE-R 179
L+G +CG H+ + ESGK+ G GQ G G + P + + +EG+ R
Sbjct: 1320 LDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVR 1379
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVA 236
L + V+ V++K VF G++ GQ+ S + P + + G I VA
Sbjct: 1380 TAGLGANHTLVVMVANK--VFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNG-KNICQVA 1436
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G L+ G V+SWG +G LG ++ L P+ L +H+ P V+S+
Sbjct: 1437 AGDQHSLALSVFGEVWSWGGSPFGQLGH-----ETITDKLAPTPLLERHKIPPD--VKSI 1489
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G A++ G ++ WG + G+LG
Sbjct: 1490 ACGYTFSAAMSAKGEVFTWGNGESGELG 1517
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--------IVQEEDYQGKWFCHNIAD 121
+K A G+ HT+ ++ + + G+N +GQ G G V E Q
Sbjct: 125 VKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAII 184
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
I+ G H+L L ++GK++S G G+ G+ G+G N E+P V ++ ++V
Sbjct: 185 QSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFV-ASLQNSKVV 243
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRV---LSQCKGVSRIVDVAS 237
++ A++ GDV+ WG GQ+ ++ +PR+ L +C G +I
Sbjct: 244 HIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKC-GAQKI---RC 299
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G ++ G +YS G +G LG G R + PTL+ T F KV +
Sbjct: 300 GDDHTLVILRSGQLYSMGANTHGQLGLGDATDRII-PTLV--TGFANE------KVIDID 350
Query: 295 AGPCTFGAITNFGHLYMWG 313
A C A+TN G ++ +G
Sbjct: 351 AKGCRSIALTNTGKVFAFG 369
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+ G N QLG+ D + P V ++R+ +++ G HT+V+
Sbjct: 1343 KILLWGKNVYGQLGHGDTKSCSAPR--VNQYLRL-------EGKVRTAGLGANHTLVVMV 1393
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F G+N GQ G + + GK +I +L G+ I G H+L L+ G+
Sbjct: 1394 ANKVFAMGSNIDGQLG---LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGE 1450
Query: 146 VYSCGWGADGQTGLGHLNNQ--ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
V+S G GQ G + ++ TP L R +I + + ++ A+S KG+VF WG
Sbjct: 1451 VWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPD-VKSIACGYTFSAAMSAKGEVFTWG 1509
Query: 204 NSEYGQISESEMQISTPRVL----SQCKGVSRIVDVASG 238
N E G++ + P+VL S K S +V +A G
Sbjct: 1510 NGESGELGHA------PKVLTYAPSLIKDFSEVVQIACG 1542
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 90 FTFGNNSFGQCG-RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
F +G ++ GQ G RG+ Q + L I+ D + F+T+SG +Y
Sbjct: 1613 FVWGEDTCGQLGIRGL------QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYV 1666
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G G+ GLGH+ TP +R + +I+K++ LA++++ V+ WG+ ++G
Sbjct: 1667 SGGSEHGRLGLGHMAPAPTPVEIR-SLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWG 1725
Query: 209 QISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPK 264
S + P+ LS S I+ V +GG L+ G ++ WG G LG G
Sbjct: 1726 NAGVSNTNDVLEPQELSSLAACS-IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTT 1784
Query: 265 VSRSMKPTLIPS--------TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
+ PT I + +L H S V + P +L+ G N
Sbjct: 1785 SAAEDSPTKISNLDGVVMDVSLGANH-----SAVLMQVTSP----------NLFTCGLNA 1829
Query: 317 YGQLGLGTVEDQ 328
GQLGLG D+
Sbjct: 1830 NGQLGLGDFVDR 1841
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D++ G + V + NL F CGLN++ QLG D + + L V +
Sbjct: 1801 VMDVSLGANHSAVLMQVTSPNL--FTCGLNANGQLGLGDFVDR-STLTAVDAL------- 1850
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
QI + G AHT ++ T+GN GQ G +D + I +
Sbjct: 1851 --DDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICN-- 1906
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG 160
+ ++ VCGQ+ T+ ++E G++Y G+ + GLG
Sbjct: 1907 -DPMVKVVCGQEVTIVVSEKGELYMAGY--ESTIGLG 1940
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 199 VFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWG- 255
VF WG+ E G++ ++SE P ++ + V +V V + G T+ L+ +G+V S G
Sbjct: 92 VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNV--LVKVCALGKQHTLFLSADGVVLSCGS 149
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFG----QHQFNPKSKVESLIAGPCTFGAITNFGHL 309
YG LG G + P PS Q + + + AG A+ + G +
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ WG +G+LG+G+ + P VA
Sbjct: 210 FSWGSGSWGKLGIGSDANAESPRFVA 235
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 33/263 (12%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI ++ + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFG 301
+Y +G G LG +P+ L G H+ P+ ++ G T
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVV 257
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
N +Y +G Q+GQLGLGT
Sbjct: 258 LTEN--AVYTFGLGQFGQLGLGT 278
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSN---VCVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K NI D +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPK-VIENIRD---QT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 25/245 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTE----DGRLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+S + ++D G ++ +G+ +G++ + + + C R + VA GG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGG- 358
Query: 241 ACTML 245
C M+
Sbjct: 359 -CHMV 362
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 33/263 (12%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI ++ + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFG 301
+Y +G G LG +P+ L G H+ P+ ++ G T
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVV 257
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
N +Y +G Q+GQLGLGT
Sbjct: 258 LTEN--AVYTFGLGQFGQLGLGT 278
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSN---VCVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K NI D +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPK-VIENIRD---QT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 25/245 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTE----DGRLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGS 240
+S + ++D G ++ +G+ +G++ + + + C R + VA GG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGG- 358
Query: 241 ACTML 245
C M+
Sbjct: 359 -CHMV 362
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 32/257 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +GN S GQ G G +++E Q W I CG HTLFLT SG+
Sbjct: 8 YCWGNTSHGQLGLGGIEDEQILTPSQVPW-------TPDSAIKQVACGHRHTLFLTSSGR 60
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+C G++ + LGH + P L+ E+ +V+++ +A+S+ G V WG++
Sbjct: 61 VYAC--GSNDHSQLGHDLPTKRPLLI-PELLDYVVVQIACGSRHSMALSEWGQVLSWGDN 117
Query: 206 EYGQISESEMQ--ISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ- 261
+ GQ+ ++ Q + P+++ Q VS+ +V +A G + L G +YSWG + GQ
Sbjct: 118 DCGQLGQATDQDIVQLPKIVRQL--VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 262 ---GPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
PK V+ S +P + +TL G V ++ G I+ ++ WG+N
Sbjct: 176 GVNTPKEVTHSNQPVRL-TTLLG-------IPVAAIACGGNHSFIISKSSAVFGWGRNNC 227
Query: 318 GQLGLGTVEDQPFPLKV 334
GQLGL + +P ++
Sbjct: 228 GQLGLNDETSRSYPTQL 244
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 150/354 (42%), Gaps = 64/354 (18%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +ACG+ T+ T S +++ CG N SQLG+ P K+ PL IP +
Sbjct: 42 IKQVACGHRHTLFLTSSG----RVYACGSNDHSQLGHDLPTKR--PL-------LIPELL 88
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ QI A G H++ +++ ++G+N GQ G+ Q+ K + L
Sbjct: 89 DYVVVQI---ACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKI----VRQLV 141
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ ++ CG +H+L LT G++YS G GQ G+ TP V + R+ L
Sbjct: 142 SKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN------TPKEVTHSNQPVRLTTL 195
Query: 184 ----SSAVDC----VLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVD 234
+A+ C +S VFGWG + GQ+ E S P L + + +
Sbjct: 196 LGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLG-VRF 254
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G L +EG V++ G YG LG G FG ++ P+ +E
Sbjct: 255 VACGDEFSVFLTNEGGVFTCGAGAYGQLGHG----------------FGANEMLPRMVME 298
Query: 292 ----SLIAGPC----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
++ C T + + G +Y +G GQLG + + P +V +G
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLP-QVVIG 351
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + IK +A G HT+ +T + + G+N Q G + + I +L
Sbjct: 38 PDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLL-------IPELLDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
++ CG H++ L+E G+V S WG + LG +Q+ P +VR ++ + +V+
Sbjct: 91 VVVQIACGSRHSMALSEWGQVLS--WGDNDCGQLGQATDQDIVQLPKIVR-QLVSKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR--------IVD 234
++ + LA++ G+++ WG++ YGQ+ ++TP+ ++ R +
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNTPKEVTHSNQPVRLTTLLGIPVAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ V+ WG G LG + SRS L G V
Sbjct: 203 IACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMV 296
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 198 DVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+++ WGN+ +GQ+ E E QI TP + S I VA G L G VY+
Sbjct: 6 ELYCWGNTSHGQLGLGGIEDE-QILTPSQVPWTPD-SAIKQVACGHRHTLFLTSSGRVYA 63
Query: 254 WGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G Q + +P LIP L V + G A++ +G + WG
Sbjct: 64 CGSNDHSQLGHDLPTKRPLLIPELL--------DYVVVQIACGSRHSMALSEWGQVLSWG 115
Query: 314 KNQYGQLGLGTVED 327
N GQLG T +D
Sbjct: 116 DNDCGQLGQATDQD 129
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 91.7 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 27/275 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G ++ + + + +G N+ GQ G G V ED ++D +M
Sbjct: 869 IVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTV--EDRLTPRRIEALSD-----VMV 921
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAVD 188
G+ H L + E G V++ G A GQ G G ETP L+ ++G E + +++
Sbjct: 922 IALGESHALAVGEDGTVWAWGANASGQLGDG----GETPSLLPARVKGLEGVGSVAAGRA 977
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
LAV D G + WG +E GQ+ + Q + RV + V + V++G L ++
Sbjct: 978 FSLAVRDDGTAWAWGANESGQLGDGSNQ--SRRVPHRVASVKGLRAVSAGAHHAMALGED 1035
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V++WG G LG G M P + S VES+ AG A+ +
Sbjct: 1036 GAVWAWGDNTLGQLGDGTSAFTVMWPQRVAEL----------SDVESVAAGEQFSVAVAH 1085
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G + WG N+YGQLG G + P +V +GG K
Sbjct: 1086 DGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSK 1120
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
LA G T+ + + ++G NSFGQ G G + + I L G I
Sbjct: 222 LAAGFDFTLAVHADGAVSSWGANSFGQLGLGT-----FTQRLSPERIPTLSG--ITSVAA 274
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H + L + G V++ G + GQ G G N++ P + G + G R V A LA
Sbjct: 275 GTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPG-VGGARAVASLDAGS--LA 331
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+ + GDV WG + GQ+ + + STP ++ + V+ +V G L +G +
Sbjct: 332 LLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPELSAVTAVV---GGAQHALALRKDGTL 388
Query: 252 YSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
++WG GL GQ G S ++P+T+ G + V S+ G A G ++
Sbjct: 389 WAWGGGLAGQLGHGGSERH---VVPATVMGL------TNVTSMATGSFHSLAALEDGSVW 439
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKV 334
WG+N YGQLG GTV ++ P++V
Sbjct: 440 AWGRNSYGQLGDGTVTERHVPVRV 463
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + +ATG H++ ++ + +G NS+GQ G G V E H + G
Sbjct: 417 TNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTER--------HVPVRVPGLPS 468
Query: 128 MDAVCGQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ AV H++ + G V++ G A GQ G G ++ P V G ++ +++
Sbjct: 469 VRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTS---VLAIAAG 525
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
VLA+ GDV+ WG + GQ+ + S +++ RV G++ I VA+G
Sbjct: 526 GSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRV----PGLAPIQSVAAGTYFSMA 581
Query: 245 LNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L ++G V++WG G LG G V R L P + G S + ++ G
Sbjct: 582 LANDGTVWTWGEGFEGQLGDGGGVQR-----LSPVAVKGL------SDIRNISVGSAHAL 630
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N GQLG G+ D+ P++V
Sbjct: 631 AVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQV 663
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 135/308 (43%), Gaps = 45/308 (14%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGA 89
G NS QLG D SF R+ P + P + I + +G AH++ + +
Sbjct: 91 GGNSAGQLGGAD-----------TSFQRLS-PARLPVLEDIVSVVSGDAHSLALGADGTV 138
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKVYS 148
+T+G+NS GQ G G + + +EG + AV D H+L L G V++
Sbjct: 139 WTWGSNSSGQLGDGTTTDRAEPQR--------VEGFTDVVAVAAGDFHSLVLKSDGTVWA 190
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G GQ G GH P V G +EG +V L++ D LAV G V WG + +G
Sbjct: 191 WGTNFHGQLGQGHTQTGLWPKPVPG-LEG--VVALAAGFDFTLAVHADGAVSSWGANSFG 247
Query: 209 QISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
Q+ ++S R+ + +S I VA+G L +G V++WG G LG G
Sbjct: 248 QLGLGTFTQRLSPERIPT----LSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGT 303
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
R+ +P+ L G V SL AG A+ G + WG N GQLG G
Sbjct: 304 WNDRA-----VPAPLPG---VGGARAVASLDAGSL---ALLEGGDVLAWGANNSGQLGDG 352
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 353 DTADRSTP 360
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G H++ +T + +G NS GQ G + +Q + + LE I+ V
Sbjct: 71 IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGA---DTSFQ-RLSPARLPVLE--DIVSVVS 124
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H+L L G V++ G + GQ G G ++ P V G + +V +++ L
Sbjct: 125 GDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTD---VVAVAAGDFHSLV 181
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+ G V+ WG + +GQ+ + Q P+ + +GV V +A+G ++ +G V
Sbjct: 182 LKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV---VALAAGFDFTLAVHADGAV 238
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
SWG +G LG G R + P IP+ S + S+ AG A+ G
Sbjct: 239 SSWGANSFGQLGLGTFTQR-LSPERIPTL----------SGITSVAAGTYHAVALGKDGT 287
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
++ WG N GQLG GT D+ P + VGG +
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGAR 320
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ ++ +A G ++ + + AF++G+N +GQ G G G + G K
Sbjct: 1068 SDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDG------KTGPRLSPAEVKIGGSKA 1121
Query: 128 MDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVK 182
V GQ H + L G + + G A GQ G G + +P GEI G R+
Sbjct: 1122 RTVVTVGAWGQ-HAVALMADGTLQAWGDNATGQLGDGTTTRRSSP----GEIRGVTRVTA 1176
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSA 241
+S+ LA+ G V+ WG + +GQ+ + +T R + +G+ +V +A+GG
Sbjct: 1177 VSTGAWHSLALRLDGTVWAWGANGFGQLGDG---TTTARAVPVPVQGLRDVVAIAAGGYH 1233
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ +G V++WGY G LG G SR++ Q + V+++ G
Sbjct: 1234 SVAVRSDGTVWTWGYNTFGQLGDGTSESRALPV-----------QVHKLEGVQAVTGGDH 1282
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G + WG N GQLG G+ D+ P+++
Sbjct: 1283 HSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRL 1318
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G H + + ++ + +G+N+ GQ G G + W +A+L +
Sbjct: 1019 LRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGT---SAFTVMW-PQRVAELS--DVES 1072
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVD 188
G+ ++ + G +S G GQ G G + +P V+ G + +V + +
Sbjct: 1073 VAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQ 1132
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+A+ G + WG++ GQ+ + + + S+P + +GV+R+ V++G L
Sbjct: 1133 HAVALMADGTLQAWGDNATGQLGDGTTTRRSSP---GEIRGVTRVTAVSTGAWHSLALRL 1189
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WG +G LG G +R+ +P + G V ++ AG A+
Sbjct: 1190 DGTVWAWGANGFGQLGDGTTTARA-----VPVPVQGLRD------VVAIAAGGYHSVAVR 1238
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N +GQLG GT E + P++V
Sbjct: 1239 SDGTVWTWGYNTFGQLGDGTSESRALPVQV 1268
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 33/288 (11%)
Query: 55 SFVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+F + P + P+ + I +A G H + + + +T+G+NS GQ G G +
Sbjct: 253 TFTQRLSPERIPTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP-- 310
Query: 114 WFCHNIADLEGEKIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
A L G AV D +L L E G V + G GQ G G ++ TP LV
Sbjct: 311 ------APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVP 364
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVS 230
E + + LA+ G ++ WG GQ+ SE + V+ G++
Sbjct: 365 ---ELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVM----GLT 417
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ +A+G ++G V++WG YG LG G R + P +P
Sbjct: 418 NVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHV-PVRVPGL---------- 466
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ A A+ G ++ WG+N GQLG GT D+ P+ V+
Sbjct: 467 PSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVS 514
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T I ++ GR+H++ + + +G+N +GQ G G + + I L G +
Sbjct: 667 TGITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTS-----RVLPSVIPGLSGIQA 721
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G H L L + G+ GQ GLG P VRG R+ +L++
Sbjct: 722 LHP--GHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGI---GRVERLAAGR 776
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
L V G V WG + GQ+ + V +GVS VASGG +L
Sbjct: 777 AHALLVRADGSVVAWGANASGQLGDGGTTHGARAV--TVRGVSCARSVASGGQHSLVLAC 834
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WG G LG G +R + P + G + ++ G T A+
Sbjct: 835 DGTVWTWGENQRGQLGDGTTSAR-----VAPGRVEGLE------GIVAVAGGGDTSLALR 883
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N GQ+G GTVED+ P ++
Sbjct: 884 SDGTVWAWGANASGQVGDGTVEDRLTPRRI 913
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTG-----LGHLNNQETPCLVRGEIEGERIVK 182
M G H+LFLT +G V++ G + GQ G L+ P L E IV
Sbjct: 69 MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL-------EDIVS 121
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ-CKGVSRIVDVASGGSA 241
+ S LA+ G V+ WG++ GQ+ + +T R Q +G + +V VA+G
Sbjct: 122 VVSGDAHSLALGADGTVWTWGSNSSGQLGDG---TTTDRAEPQRVEGFTDVVAVAAGDFH 178
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L +G V++WG +G LGQG + P +P V +L AG
Sbjct: 179 SLVLKSDGTVWAWGTNFHGQLGQG-HTQTGLWPKPVPGL----------EGVVALAAGFD 227
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G + WG N +GQLGLGT + P ++
Sbjct: 228 FTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERI 263
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+PV+ + +A G H++ + + +T+G N+FGQ G G + +
Sbjct: 1214 VPVPVQGLRDVVA-IAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSES-----RALPVQ 1267
Query: 119 IADLEGEKIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ LEG + AV G DH +L L G V G A GQ G G ++ TP ++ +++G
Sbjct: 1268 VHKLEG---VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLK-DVDG 1323
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKGVSRIVD 234
V+ +A +A+ G V+ WG++ +GQ+ + ++ PR V G+
Sbjct: 1324 LTEVRAGAA--HTVALGKDGTVWTWGDNAHGQLGDG---VTGPRMRLVPKPVSGLPAATA 1378
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+ +G E ++WG +G LG G R+ +P + S ++
Sbjct: 1379 IGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRA-EP----------QRMKLLSGLK 1427
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G T A+T G L WG + +G LGLG + + P +V
Sbjct: 1428 VIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRV 1470
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 76/305 (24%), Positives = 124/305 (40%), Gaps = 34/305 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G NS QLG + P PLP + + L G ++ + +
Sbjct: 292 GSNSSGQLGDGTWNDRAVP---------APLPGVGGARAVASLDAG---SLALLEGGDVL 339
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G N+ GQ G G D + + +L + V G H L L + G +++ G
Sbjct: 340 AWGANNSGQLGDG-----DTADRSTPSLVPELSA--VTAVVGGAQHALALRKDGTLWAWG 392
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
G GQ G G P V G + +++ LA + G V+ WG + YGQ+
Sbjct: 393 GGLAGQLGHGGSERHVVPATVMGLTN---VTSMATGSFHSLAALEDGSVWAWGRNSYGQL 449
Query: 211 SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSM 269
+ ++ V + G+ + VA+ G + +G V++WG GQ G +R
Sbjct: 450 GDG--TVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDR 507
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
+ S L + V ++ AG A+ + G ++ WG N GQLG GT D+
Sbjct: 508 ARPVAVSGL---------TSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKL 558
Query: 330 FPLKV 334
P++V
Sbjct: 559 TPVRV 563
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 81/292 (27%), Positives = 116/292 (39%), Gaps = 38/292 (13%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P I+ +A G ++ + ++ +T+G GQ G G G +A
Sbjct: 560 PVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDG-------GGVQRLSPVA 612
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
I + G H L + G V++ G +GQ G G ++ P VR + G I
Sbjct: 613 VKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQVR-NLTG--I 669
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGG 239
+S LA+ G V WG++ YGQ+ + + T RVL S G+S I + G
Sbjct: 670 TAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTL---TSRVLPSVIPGLSGIQALHPGH 726
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L+ + + WGY G LG G S +P Q +VE L AG
Sbjct: 727 LHVLALHADKTLRGWGYNRFGQLGLG-AAGWSARPV----------QVRGIGRVERLAAG 775
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLG---------TVEDQPFPLKVAVGGQ 339
+ G + WG N GQLG G TV VA GGQ
Sbjct: 776 RAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQ 827
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 18/244 (7%)
Query: 88 GAFTFGNNSFGQ-CGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
GA++FG NS+G+ C V FCHN+ KI+D CG + T FL E+G V
Sbjct: 12 GAYSFGQNSYGELCHNDTVDRTLPTPISFCHNV------KILDVACGNEQTAFLFETGDV 65
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC--VLAVSDKGDVFGWGN 204
++CG+ GQ G+G + ++ LV + E I + SA C + A+S G ++ +G
Sbjct: 66 FTCGYNDSGQCGIGSTSRVQSLRLVPALVT-EDIAHIRSANGCEHLTAISRSGALYTFGF 124
Query: 205 SEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGP 263
+ GQ+ S I+TP + +V+VA ++ EG +Y++G LGQ
Sbjct: 125 NSRGQLGHGSTNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLG 183
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ +P T FN + + T ++TN G + +GKN +GQLG G
Sbjct: 184 IDDGMDRHVPVPLT-----YFNSRPVLAVACGQHHTVVSLTN-GGVVAFGKNDHGQLGTG 237
Query: 324 TVED 327
D
Sbjct: 238 YTLD 241
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 140/339 (41%), Gaps = 32/339 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI D+ACG T ++ D +F CG N Q G + V S +P
Sbjct: 44 VKILDVACGNEQTAFLFETGD----VFTCGYNDSGQCGIGSTSR-------VQSLRLVPA 92
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V I+ A G H I+ + +TFG NS GQ G G K I D
Sbjct: 93 LVTEDIAHIRS-ANGCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTK-----IKD 146
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +++ C HT+ +T G +Y+ G GQ G+ ++ P + ++
Sbjct: 147 LASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLT-YFNSRPVL 205
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGG 239
++ + G V +G +++GQ+ ++P +L+ + +A G
Sbjct: 206 AVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGY 265
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L + G VYS+G YG LG G + S +PTLI + K+ + G
Sbjct: 266 YHTIALAEHGSVYSFGRNDYGQLGHGHRHHLS-EPTLIKAL--------AKTHAVQVTCG 316
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ G +Y +G+N +GQLGLG + D P +A
Sbjct: 317 CYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIA 355
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 22/237 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++AC Y T+V T L+ G N QLG D + +P+P+
Sbjct: 152 VVEVACSYFHTIVMTMEG----TLYAFGRNDLGQLGIDDGMDR-----------HVPVPL 196
Query: 64 KHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ +++ + +A G+ HT+V N G FG N GQ G G + A L
Sbjct: 197 TYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLA---APL 253
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ + CG HT+ L E G VYS G GQ G GH ++ P L++ + V+
Sbjct: 254 DSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKA-LAKTHAVQ 312
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASG 238
++ L +S+ G V+ +G + +GQ+ + ++P++++ + +V VASG
Sbjct: 313 VTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRD-KFVVKVASG 368
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 27/278 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
Q+ +A G HTI + + EG +++G+N +GQ G G D + ++ I + ++I+
Sbjct: 498 QVVSVACGEFHTIALCE-EGVYSWGSNEYGQLGVG-----DTRTRYRPVLITHISSKQIV 551
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
VCG HTL +T KVYS GWG GQ GL + NQ TP + ++ ++++ ++
Sbjct: 552 SVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQI-DLLDSHKVIQAAAGYA 610
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
++ + V+ +G YGQ+ S + P+++ + I ++ G +++
Sbjct: 611 HSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLT-LDSIYLISCGPFETIAISE 669
Query: 248 EGLVYSWGYGL-------LGQGPKVSRSMKPT-------LIPSTLFGQHQFNPKSKVESL 293
+ ++ WG + K R M P TL QF + + +
Sbjct: 670 DQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETL----QFQLQHPITQI 725
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G + +T+ +Y WG N GQLG DQ P
Sbjct: 726 FCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAP 763
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ A GY + V T + ++ G + QLG K+ P +LV S
Sbjct: 601 KVIQAAAGYAHSAVLTSQR----YVYTFGADLYGQLGIGSHYKQVIP-QLVDSLTL---- 651
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNN--SFGQCGRGIVQEEDYQGKWFCHNIA 120
I ++ G TI I++++ F +G N F C + E G+ N
Sbjct: 652 -----DSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKA---ESSKYGRKMASNTK 703
Query: 121 DLEGE------------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQE 166
DL I CG H + LT +VY+ G+ GQ LGH N +Q
Sbjct: 704 DLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQ--LGHYNKIDQS 761
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
P LV+ I I+ ++ + +A ++ WG ++ G+I
Sbjct: 762 APRLVKALIR-RAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKI 804
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC--KGVSRIVDVASGGSACTMLNDEGL 250
V++ +++ WG E G ++ P + +G+ ++V VA G L +EG
Sbjct: 460 VTNNKELYTWGK-ECGGRKDNVQNTCLPMRMENLHNQGI-QVVSVACGEFHTIALCEEG- 516
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VYSWG YG LG G +R +P LI ++ S++ G AIT+
Sbjct: 517 VYSWGSNEYGQLGVGDTRTR-YRPVLITHI--------SSKQIVSVVCGAYHTLAITSDY 567
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+Y WG +GQLGL +VE+Q P ++
Sbjct: 568 KVYSWGWGVHGQLGLKSVENQLTPKQI 594
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 39/280 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IACG +V T + + ++ G D +LG+ + R + P + +M+ +R
Sbjct: 298 IIHIACGAKHSVALTSAGE----VYSWGSGEDGRLGHGEMRDRNVPRK-IMALLR----- 347
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD-- 121
+I++++ G +HT V++D FTFG G+ G G + CH+
Sbjct: 348 ----HRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTK---------CHDTPQEV 394
Query: 122 ----LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIE 176
++I+ VCG + T+ L+ G+V+S G ++GQ GLG + E +PCL+ ++
Sbjct: 395 PTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLD 454
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ----CKGVSRI 232
RIV ++ LA++ + +V WG EYGQ+ + +P + Q C+G
Sbjct: 455 N-RIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEG-GHP 512
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSM 269
+ G + ++Y+WG YG G G ++R +
Sbjct: 513 QRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDI 552
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I H+A G H++ +T +++G+ G+ G G +++ + K I L +I
Sbjct: 298 IIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRK-----IMALLRHRIEY 352
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVD 188
CG HT +++ V++ G G +G+ GLG +TP V +RI+K+ +
Sbjct: 353 VSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWN 412
Query: 189 CVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+S +G VF WG GQ + + +P ++ + +RIVDVA G + L
Sbjct: 413 FTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLD-NRIVDVACGYTHSLALT 471
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ V SWG G GQ G + P I +LF +P + + G F +I
Sbjct: 472 SQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHP----QRIYCG--AFHSIIT 525
Query: 306 FGH--LYMWGKNQYGQLGLGTVEDQPFP 331
G LY WG N YG GLG ++ P
Sbjct: 526 AGSKILYAWGLNSYGACGLGHTLNRDIP 553
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER-- 179
L G+ I + CG +H L+L+ +G VYS A T N +TP LV+ E+ E+
Sbjct: 237 LPGQSIAEIACGGNHILYLSSAGDVYSSEDHAISTTEPT--NMLQTPQLVK-ELTLEKAL 293
Query: 180 ----IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPR-VLSQCKGVSRIV 233
I+ ++ +A++ G+V+ WG+ E G++ EM+ + PR +++ + RI
Sbjct: 294 HRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLR--HRIE 351
Query: 234 DVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
V+ GGS +++D+ LV+++G G LG G P +P+ F K ++
Sbjct: 352 YVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHD-TPQEVPTWGFR------KQRI 404
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
++ G A++ G ++ WGK GQ GLG
Sbjct: 405 IKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLG 437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 42/232 (18%)
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
H+IA +E +D C + +FL WG G H N+ TP V +
Sbjct: 199 HDIASME----LDQKCAR---VFL----------WGRP--PGWSHTNSLLTPQKV-DVLP 238
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQC---KGVSR 231
G+ I +++ + +L +S GDV+ +SE IS +E + TP+++ + K + R
Sbjct: 239 GQSIAEIACGGNHILYLSSAGDVY---SSEDHAISTTEPTNMLQTPQLVKELTLEKALHR 295
Query: 232 --IVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
I+ +A G L G VYSWG G LG G R++ P I + L
Sbjct: 296 RPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNV-PRKIMALL-------- 346
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+ ++E + G +++ ++ +G+ + G+LGLG + P +V G
Sbjct: 347 RHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWG 398
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQ--LGYHDPRKKGNPLELVMSFVRIP 60
+I + CG+ FT+ + ++F G S+ Q LG+ D + + +P
Sbjct: 403 RIIKVVCGWNFTIALSLEG----RVFSWGKQSEGQCGLGFCD-QDELSPC---------- 447
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L K +I +A G H++ +T ++G +GQ GRGIV + + ++
Sbjct: 448 LIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPES--IDQSLF 505
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
EG CG H++ S +Y+ G + G GLGH N++ P
Sbjct: 506 ACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIP 553
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 23/256 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--IADLEGEKIMDA 130
+A G H++ IT + F+FG+N +GQ G G K + + L+ ++ +
Sbjct: 47 VACGDQHSVFITASGRTFSFGSNDYGQLGHG-------HTKALVNPRCVKALKDKRAILV 99
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
CG+ HTL T+ KVY+ G ++ Q G+ + + G ++ L++ D
Sbjct: 100 ACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHS 159
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
LA+S KG V+ WG+SE+GQ+ + ++ Q K + + +++G +N +G+
Sbjct: 160 LALSAKGIVYLWGSSEHGQLGLGRKK--QRKLPVQLKTEGKAIAISAGAYHSAYVNTDGV 217
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y++G +G LG + KP+ +P + + V S+ G A+T G
Sbjct: 218 LYTFGETEHGKLGTNLAPKKCRKPSKVP---------DIQGLVTSVACGGSHTVALTCDG 268
Query: 308 HLYMWGKNQYGQLGLG 323
Y +G GQLGLG
Sbjct: 269 RAYSFGDGSQGQLGLG 284
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 33/237 (13%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
FTFG + F ++ G ++ N A ++ CG H++F+T SG+ +S
Sbjct: 22 FTFGKSKF---------SDNLPGTFWVKNDA------VISVACGDQHSVFITASGRTFSF 66
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG-NSEYG 208
G GQ G GH P V+ ++ +R + ++ L +D V+ +G NSE+
Sbjct: 67 GSNDYGQLGHGHTKALVNPRCVKA-LKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQ 125
Query: 209 Q-ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
+ S + P++++ GV ++ + +G L+ +G+VY WG +G LG G K
Sbjct: 126 LGVKSSAAYHADPQLVATLNGV-QVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRK 184
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
R + P Q + K ++ AG + G LY +G+ ++G+LG
Sbjct: 185 KQRKL-PV----------QLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLG 230
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIV 233
++ + ++ ++ + ++ G F +G+++YGQ+ + + PR + K R +
Sbjct: 39 VKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKD-KRAI 97
Query: 234 DVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
VA G S + D+ VY++G LG + P L+ +TL G +V
Sbjct: 98 LVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLV-ATLNG-------VQV 149
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
++L AG A++ G +Y+WG +++GQLGLG + + P+++ G+
Sbjct: 150 KALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGK 198
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 37/279 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG T+VAT K K++ G+NS+ QLG +LV + +
Sbjct: 99 VACGRSHTLVATDDK----KVYAFGINSEHQLGVKSSAAYHADPQLVATLNGV------- 147
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
Q+K L G H++ ++ + +G++ GQ G G ++ + EG+
Sbjct: 148 --QVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQL------KTEGKA 199
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I + G H+ ++ G +Y+ G+T G L P R + I L ++
Sbjct: 200 IAISA-GAYHSAYVNTDGVLYTF-----GETEHGKLGTNLAPKKCRKPSKVPDIQGLVTS 253
Query: 187 VDC----VLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V C +A++ G + +G+ GQ + + P ++ GV ++ V++G S
Sbjct: 254 VACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGV-KMARVSAGQS 312
Query: 241 ACTMLNDEGLVYSWGYGLLGQ-----GPKVSRSMKPTLI 274
L++ +Y+ G G G+ G S P L+
Sbjct: 313 HTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLV 351
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ G+ G G ++EE + + + A CG HTL LT+ GK+Y+C
Sbjct: 4 YCWGSTVHGELGLGGIEEEQVMTP---REMDWSQAANVQQAACGGSHTLLLTKDGKLYTC 60
Query: 150 GWGADGQTGLGHLNN---QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G GQ LGH N + P + +E + ++S + LA+++ G +F WG++
Sbjct: 61 GNNDHGQ--LGHDTNNLPNKRPQFISA-LENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117
Query: 207 YGQISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ +S PR++ +V ++ G S C L + G +++WG YG LG
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGL 176
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--------GAITNFGHLYMWG 313
G + TL V+SL P F A++ G ++ WG
Sbjct: 177 GTTGKKVPTATL----------------VKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG 220
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
KN +GQLGL ++ + +P ++
Sbjct: 221 KNTFGQLGLNDLDSRCYPTQL 241
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ ++ A G +HT+++T + +T GNN GQ G + + ++ I+ LE
Sbjct: 35 AANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQF----ISALENYI 90
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKL 183
+ CG H+L LT G+++S WG++ LGH + + P +++ I + +V++
Sbjct: 91 VTQVSCGLSHSLALTNWGQLFS--WGSNATGQLGHDLDMVSYPAPRMIKS-IATKTVVQI 147
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S LA+++ G++F WG +EYGQ + + ++ T ++ G+ I +A GG+
Sbjct: 148 SCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIP-IAFIACGGNH 206
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
++ G ++ WG +G LG SR L G V + G
Sbjct: 207 SFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG---------VRYISCGDD 257
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G +GQLG GT ++ P V
Sbjct: 258 FSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV 293
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 39/269 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVRI 59
+ ACG T++ TK KL+ CG N QLG HD P K+ + + +++
Sbjct: 38 VQQAACGGSHTLLLTKDG----KLYTCGNNDHGQLG-HDTNNLPNKRPQFISALENYI-- 90
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ ++ G +H++ +T+ F++G+N+ GQ G + Y +I
Sbjct: 91 ----------VTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL-DMVSYPAPRMIKSI 139
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
A + ++ CG H L LT SG++++ G GQ GLG + + + G
Sbjct: 140 AT---KTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIP 196
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-------QISTPRVLSQCKGVSRI 232
I ++ + AVS G +FGWG + +GQ+ +++ Q+ T R L GV I
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSL----GVRYI 252
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ G L EG V++ G G GQ
Sbjct: 253 ---SCGDDFSVFLTQEGGVFTCGLGTFGQ 278
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 195 IPIAFIACGGNHSFAVSKSG----AIFGWGKNTFGQLGLNDLDSRCYPTQL--KTLR--- 245
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +++++ G ++ +T G FT G +FGQ G G E F +
Sbjct: 246 -----SLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF-----E 295
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G KI CG+ HTL F+ GKVY G G GQ G+G + TP +VRG
Sbjct: 296 LMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVRG 348
>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
Length = 1207
Score = 91.7 bits (226), Expect = 5e-16, Method: Composition-based stats.
Identities = 93/359 (25%), Positives = 159/359 (44%), Gaps = 64/359 (17%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP--RKKGNPLELVMSFVRI 59
I IT ++CG +V T S+ ++ G N QLG DP ++K +P V +
Sbjct: 99 IPITQVSCGTSHSVFITSSQ----LIYSMGSNLQGQLGIDDPYTQQKSSP-------VLV 147
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG-------------IVQ 106
L V H QI + G HT+ + + +++G+N GQCG G IV+
Sbjct: 148 ELLVNHKPIQI---SCGNNHTLALMRDGEVYSWGSNENGQCGSGASPFHTVVQWAPKIVK 204
Query: 107 EEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE 166
+DYQ + K +D+ G H+ F+ E G+++ CG G GQ G ++
Sbjct: 205 FDDYQRPFI----------KQIDS--GAFHSGFVDEIGRLFMCGKGDQGQLGNMSYQDEL 252
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLS 224
+P + +I E+I +++ D + ++ G+++ G++ GQ+ S + S VL
Sbjct: 253 SPFYI-SKIP-EKIQEVACGDDHTVVLTRNGEIYTMGSNSRGQLGTGPSSSRGSNVPVLL 310
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQH 282
Q R+ + +G + ++ D L Y WG G G+ P +S++ + G+
Sbjct: 311 QELNFIRMTRIRAGQFSASLSVDNQL-YLWGCGTFGEFFTPHRVKSVQNLELADFQLGKS 369
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
F +T G +Y WG N GQLGL + P +V A+ G++
Sbjct: 370 GF---------------LTVLTRQGSVYTWGINDMGQLGLRDSIQRSTPHRVEALDGKR 413
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 59/144 (40%), Gaps = 20/144 (13%)
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPR----VLSQCKGVSRIVDVASGGSACTMLNDEGL 250
D +VF WG+ ++GQ+ + QIS+ + V C I V+ G S + L
Sbjct: 61 DYTEVFSWGSDKFGQLGLGK-QISSQKQFHMVPRFCSYNIPITQVSCGTSHSVFITSSQL 119
Query: 251 VYSWGYGLLGQ----GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+YS G L GQ P + P L+ L H K + G A+
Sbjct: 120 IYSMGSNLQGQLGIDDPYTQQKSSPVLV--ELLVNH------KPIQISCGNNHTLALMRD 171
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPF 330
G +Y WG N+ GQ G G PF
Sbjct: 172 GEVYSWGSNENGQCGSGA---SPF 192
Score = 45.1 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 96/258 (37%), Gaps = 67/258 (25%)
Query: 85 DNEGAFTFGNNSFGQCGRG---IVQEEDYQGKWFC-HNIADLEGEKIMDAVCGQDHTLFL 140
D F++G++ FGQ G G Q++ + FC +NI I CG H++F+
Sbjct: 61 DYTEVFSWGSDKFGQLGLGKQISSQKQFHMVPRFCSYNIP------ITQVSCGTSHSVFI 114
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T S +YS G GQ L + D
Sbjct: 115 TSSQLIYSMGSNLQGQ----------------------------------LGIDDP---- 136
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---G 257
Y Q Q S+P VL + + + ++ G + L +G VYSWG G
Sbjct: 137 ------YTQ------QKSSP-VLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENG 183
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
G G ++ F +Q + ++ + +G G + G L+M GK
Sbjct: 184 QCGSGASPFHTVVQWAPKIVKFDDYQ---RPFIKQIDSGAFHSGFVDEIGRLFMCGKGDQ 240
Query: 318 GQLGLGTVEDQPFPLKVA 335
GQLG + +D+ P ++
Sbjct: 241 GQLGNMSYQDELSPFYIS 258
>gi|320169045|gb|EFW45944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 411
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 55/279 (19%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A GR H+IV T +GA N+ E +
Sbjct: 160 VVSMACGRQHSIVATATQGASRELANT---------------------------PEMPLR 192
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGE-IEGERIVKLSSA 186
CG D TL L + +Y+ GWGADGQTGLG + +P + E GE++ ++
Sbjct: 193 VACGLDLTLIL-HADVLYASGWGADGQTGLGVDTDVRLLSPIVFEAEDFVGEKVHHFATR 251
Query: 187 VDCVLAVSDKGD----VFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
DC A+ + +F WGNSEYGQ S + + P V+ G + + +A+GGS
Sbjct: 252 ADCSYALVSNSNGVHRLFTWGNSEYGQTSLGKKPDKYLKPHVVPGL-GAASVKQIAAGGS 310
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L LG+G S++ + LF F P V L++G
Sbjct: 311 FAAFLT-----------ALGRGNHTLESLEIAQLDRALF---NFEP---VVQLVSGNDYV 353
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+T G L+ WG+ Q+G+LGLG D P +V + G+
Sbjct: 354 MALTVTGKLFAWGRGQWGRLGLGHTADAWVPTRVPIEGK 392
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 41/213 (19%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG T++ L+ G +D Q G V + VR+ P+
Sbjct: 193 VACGLDLTLILHADV-----LYASGWGADGQTGLG-----------VDTDVRLLSPIVFE 236
Query: 67 ST-----QIKHLATGRAHTIVITDNEGA----FTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ ++ H AT + + N FT+GN+ +GQ G ++ D K H
Sbjct: 237 AEDFVGEKVHHFATRADCSYALVSNSNGVHRLFTWGNSEYGQTSLG--KKPDKYLK--PH 292
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L + G FLT G+ G L + E L R
Sbjct: 293 VVPGLGAASVKQIAAGGSFAAFLTALGR------------GNHTLESLEIAQLDRALFNF 340
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E +V+L S D V+A++ G +F WG ++G++
Sbjct: 341 EPVVQLVSGNDYVMALTVTGKLFAWGRGQWGRL 373
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTIVI 83
KL+ CG ++ +LG D P IP ++ IK +A +G H + +
Sbjct: 3312 KLYACGEGTNGRLGLGDDSNVCEP-------KLIPFLSQY---MIKKMAVHSGGKHALAL 3361
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
T + F++G G+ G G D I L+ ++I D CG H+ +T S
Sbjct: 3362 TQDGKIFSWGEGEDGKLGHGNSVSLDKP-----RLIESLKSKRIRDIACGSGHSAAITSS 3416
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFG 201
G++Y+ G G G+ G G Q P LV+ + G+R+++++ S +A++ G V+
Sbjct: 3417 GELYTWGLGEYGRLGHGDTATQMKPKLVQSLV-GQRVIQVACGSRDAQTMALTADGSVYS 3475
Query: 202 WGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG+ ++G++ TP ++ + G+ +V + G L G V++WG Y
Sbjct: 3476 WGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTWGKGDYF 3534
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G KPTL+ L G+ KV + G A+T+ G +Y WG N +
Sbjct: 3535 RLGHGND-HHVRKPTLVEG-LRGK-------KVVHVAVGALHCLAVTDTGQVYAWGDNDH 3585
Query: 318 GQLGLGT 324
GQ G G+
Sbjct: 3586 GQQGNGS 3592
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
+ G TLF+ ++ GK+Y+CG G +G+ GLG +N P L+ + ++K + S
Sbjct: 3297 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLI--PFLSQYMIKKMAVHSG 3354
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G +F WG E G++ + + + PR++ K RI D+A G +
Sbjct: 3355 GKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKS-KRIRDIACGSGHSAAI 3413
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTF 300
G +Y+WG YG LG G ++ MKP L+ S L GQ +V + G
Sbjct: 3414 TSSGELYTWGLGEYGRLGHGDTATQ-MKPKLVQS-LVGQ-------RVIQVACGSRDAQT 3464
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG +G+LG G
Sbjct: 3465 MALTADGSVYSWGDGDFGKLGRG 3487
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--IAD 121
+ P T I + G H + +T + +++GN G+ G G W+ +
Sbjct: 502 EKPVTMIASHSDG-THYLALTQDSSVYSWGNGDGGRLGHG-------DRVWYDEPKLVEA 553
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L + I CG ++ L+ +G++Y+ G G G+ G G+ +N P LV + G +V
Sbjct: 554 LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA-LNGHMVV 612
Query: 182 KLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG 238
++ S L V+ G VF WG+ YG++ S TP+++ + ++ + V G
Sbjct: 613 HVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDIN-VAKVYCG 671
Query: 239 GSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G L G VY+WG G LG G + P +I + KV+ L
Sbjct: 672 GQFSAALTAYGEVYTWGKGEGYRLGHGNE-EHIRYPKVI--------EVLXTKKVKELCV 722
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQL--GLGTVEDQP 329
G A+T +Y WG+N YGQ+ LGTV +P
Sbjct: 723 GNFHVLALTEDQLVYGWGRNDYGQIDPALGTVVPEP 758
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + T S + L+ GL +LG+ D + P +LV S V
Sbjct: 3399 RIRDIACGSGHSAAITSSGE----LYTWGLGEYGRLGHGDTATQMKP-KLVQSLV----- 3448
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
++ +A G A T+ +T + +++G+ FG+ GRG G C+
Sbjct: 3449 ----GQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG--------GSDGCYTPL 3496
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
I L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3497 LIDRLNGLGVVQIECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-L 3553
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G+++V ++ LAV+D G V+ WG++++GQ
Sbjct: 3554 RGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3587
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I +L
Sbjct: 4374 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKL-----IEEL 4428
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G +Q TP LV ++ +++
Sbjct: 4429 LGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA-LQDYKVID 4487
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ ++ V G
Sbjct: 4488 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VIKVECGS 4546
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G +Y+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4547 QFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4597
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A T+ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4598 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKK 4642
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 41/267 (15%)
Query: 85 DNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
D GA + +G+N GQ G ++ + C +++ L ++ G+ L +T
Sbjct: 4289 DGSGAIYGWGHNHRGQLGG--LEGAKVKLPVLCESLSALRPVQLTG---GEQTLLAVTAD 4343
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GKVY+ G+GA G+ G+G ++ P L+ + +++ S C LA+S +G V+
Sbjct: 4344 GKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHC-LALSSEGHVYS 4402
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG + G++ + + P+++ + G + IVD+A GG + G +Y+WG YG
Sbjct: 4403 WGEGDDGKLGHGNRLMYDRPKLIEELLG-TEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4461
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-----IAGPCTFG-----AITNFG 307
LG G + Q PK VE+L I C G +T+
Sbjct: 4462 RLGHGD----------------SEDQLTPK-LVEALQDYKVIDVACGSGDAQTLCVTDDD 4504
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ WG YG+LG G + P+K+
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKI 4531
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ VYS G G G+ G G + P LV ++ + I ++ +S
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSS 574
Query: 196 KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + + P +++ G +V VA SG S + G+V+
Sbjct: 575 NGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNG-HMVVHVACGSGDSQTLCVTASGIVF 633
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T +G +
Sbjct: 634 SWGDGNYGKLGRG-GCDGSKTPKIVDKLL--------DINVAKVYCGGQFSAALTAYGEV 684
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WGK + +LG G E +P + V
Sbjct: 685 YTWGKGEGYRLGHGNEEHIRYPKVIEV 711
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G ++ V++ N +T+G ++G+ G G + + L G ++
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHG-----NSDNVLIPTLVTALNGHMVVH 613
Query: 130 AVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG TL +T SG V+S G G G+ G G + +TP +V ++ + K+
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIV-DKLLDINVAKVYCGG 672
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A++ G+V+ WG E ++ +E I P+V+ + ++ ++ G L
Sbjct: 673 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVI-EVLXTKKVKELCVGNFHVLALT 731
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQH 282
++ LVY WG GQ P + + +PTL P TL G++
Sbjct: 732 EDQLVYGWGRNDYGQIDPALGTVVPEPTLCP-TLSGKN 768
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + V E+ + + + ++ + VS +G ++ G G+
Sbjct: 3264 WGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGR 3323
Query: 210 ISE-SEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPK 264
+ + + P+++ + + + + V SGG L +G ++SWG G LG G
Sbjct: 3324 LGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNS 3383
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
VS KP LI S ++ + G AIT+ G LY WG +YG+LG G
Sbjct: 3384 VSLD-KPRLIESL--------KSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGD 3434
Query: 325 VEDQPFP-LKVAVGGQK 340
Q P L ++ GQ+
Sbjct: 3435 TATQMKPKLVQSLVGQR 3451
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
D L+ G ++GWG++ GQ+ E ++ P VL + R V + G +
Sbjct: 4283 DWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLLAVT 4341
Query: 247 DEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G VY+ GYG LG G S M PTL+ S QH F K V S G A+
Sbjct: 4342 ADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESI---QHVFVKKVAVNS---GGKHCLAL 4394
Query: 304 TNFGHLYMWGKNQYGQLGLGT--VEDQPFPLKVAVGGQ 339
++ GH+Y WG+ G+LG G + D+P ++ +G +
Sbjct: 4395 SSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTE 4432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT IACG ++ V + N +L+ G + +LG+ GN +++ + L
Sbjct: 559 ITFIACGSTYSAVLSS----NGELYTWGRGNYGRLGH------GNSDNVLIPTLVTALN- 607
Query: 64 KHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ H+A +G + T+ +T + F++G+ ++G+ GRG + + + D
Sbjct: 608 ---GHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC--DGSKTPKIVDKLLD 662
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ K+ CG + LT G+VY+ G G + G G+ + P ++ + +++
Sbjct: 663 INVAKVY---CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIE-VLXTKKVK 718
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+L VLA+++ V+GWG ++YGQI
Sbjct: 719 ELCVGNFHVLALTEDQLVYGWGRNDYGQI 747
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D +IP+
Sbjct: 4484 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKIPMK 4530
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4531 IESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4585
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + T+ G+V++ G +GQ G G + + P LV ++G++I
Sbjct: 4586 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA-LQGKKIT 4644
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4645 RVACGSAHTLAWS 4657
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 237 SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
S G+ L + VYSWG G LG G +V +P L+ + + K +
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYD-EPKLVEALV---------DKNITF 561
Query: 294 IAGPCTFGAI-TNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQ 339
IA T+ A+ ++ G LY WG+ YG+LG G ++ P L A+ G
Sbjct: 562 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGH 609
>gi|307190587|gb|EFN74569.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 967
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE------TPCLVR 172
+A L + I+D CG H+L LT GKVY WG + G +N+++ TPC V+
Sbjct: 778 VASLREKYILDIACGYRHSLALTSDGKVY--AWGENNWQNKGQINDEKIVTFISTPCQVK 835
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVS 230
E+E + +V ++ + ++DK +++GWGN++ QIS +S+ PR +
Sbjct: 836 HELENKNVVYIACGPSFNIVITDKNEIYGWGNNDSCQISTVQSDKYYRCPRKIITISN-- 893
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLI 274
+IV +A G L +EG +Y+WG GQ G K R P ++
Sbjct: 894 KIVKLACGSDHTLALTNEGEIYAWGDNFYGQIGVKKLRHSGPIMV 938
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 11/149 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE------TPCLVR 172
+ +L ++I+D CG+ H+L LT GKVY WG + G +N++ TP V+
Sbjct: 165 VPNLSEKRIVDIACGRGHSLALTSDGKVY--AWG---ENNYGQINDESGFSFISTPFQVK 219
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI 232
E+E + +V ++ + C + ++DK +++ WG ++ ++ + R++ +I
Sbjct: 220 HELENKNVVYIACDLLCNIVITDKNEIYSWGENDRNKMRNNASHCCPLRIIICSTIWDKI 279
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
V V G +L ++G +Y+WG GQ
Sbjct: 280 VKVTCGYDHTLVLTNKGDIYAWGSNHFGQ 308
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 57 VRIPLPVKHPS---TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQC----GRGIVQEED 109
++I P P+ +I +A GR H++ +T + + +G N++GQ G +
Sbjct: 157 IKISTPTLVPNLSEKRIVDIACGRGHSLALTSDGKVYAWGENNYGQINDESGFSFISTP- 215
Query: 110 YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
+Q K +LE + ++ C + +T+ ++YS WG + + + NN C
Sbjct: 216 FQVK------HELENKNVVYIACDLLCNIVITDKNEIYS--WGENDRNKMR--NNASHCC 265
Query: 170 LVRGEIEG---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM------QISTP 220
+R I ++IVK++ D L +++KGD++ WG++ +GQI + + +IS
Sbjct: 266 PLRIIICSTIWDKIVKVTCGYDHTLVLTNKGDIYAWGSNHFGQIGQYDYYFIKFPEISKD 325
Query: 221 RVLSQCKGVSR---------IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP 271
+ + K R ++D+A+ + + +G +Y W G V +
Sbjct: 326 KEQNDKKRYDRQVNVPEMGKVLDIAALRFSSVAVGYDGTIYVW-------GELVYKYNDS 378
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
S L + SK S P F I +F H Y K Y L L T
Sbjct: 379 NYNDSYLVYNYN---GSKRHSKTPLPTKFSRIHDFLHAYNGWKMIYKPLTLFT 428
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I DIACGY ++ T K++ G N+ G + K +++F+ P V
Sbjct: 786 ILDIACGYRHSLALTSDG----KVYAWGENNWQNKGQINDEK-------IVTFISTPCQV 834
Query: 64 KHP--STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
KH + + ++A G + IVITD + +GNN C VQ + Y + C
Sbjct: 835 KHELENKNVVYIACGPSFNIVITDKNEIYGWGNN--DSCQISTVQSDKY---YRCPRKII 889
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL 162
KI+ CG DHTL LT G++Y+ G GQ G+ L
Sbjct: 890 TISNKIVKLACGSDHTLALTNEGEIYAWGDNFYGQIGVKKL 930
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 24/247 (9%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
I++T ++ ++F +S E D + I +L G+ I L L
Sbjct: 700 IIVTKDKNVYSFDYSS----------EFDDTHTTYLKKINELCGKNIKTFAHNHFLILAL 749
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
TE G+VYSC + + + +E+ + + I+ ++ LA++ G V+
Sbjct: 750 TEEGEVYSCNFIENKRDVSIP---EESTFTQVASLREKYILDIACGYRHSLALTSDGKVY 806
Query: 201 GWGNSEY---GQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
WG + + GQI++ ++ ISTP + +V +A G S ++ D+ +Y WG
Sbjct: 807 AWGENNWQNKGQINDEKIVTFISTPCQVKHELENKNVVYIACGPSFNIVITDKNEIYGWG 866
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Q V +S K P + +K+ L G A+TN G +Y WG N
Sbjct: 867 NNDSCQISTV-QSDKYYRCPRKII-----TISNKIVKLACGSDHTLALTNEGEIYAWGDN 920
Query: 316 QYGQLGL 322
YGQ+G+
Sbjct: 921 FYGQIGV 927
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 118/303 (38%), Gaps = 34/303 (11%)
Query: 43 PRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR 102
P +K P++L S + L + S L I++T ++ ++ +
Sbjct: 38 PAEKIIPMDLKNSLLFHFLKPEFISQIHMVLVYDDNEAIIVTKDKNVYSLSYSD------ 91
Query: 103 GIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG------WGADGQ 156
+D + I +L G+ I L LTE G+VY W
Sbjct: 92 ----PDDLHTAIYPKKIKELCGKNIKTLAHSNFFILALTEEGEVYYWEFESWNLWDTYDS 147
Query: 157 TGL----GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
+G H+ TP LV + +RIV ++ LA++ G V+ WG + YGQI++
Sbjct: 148 SGTYVPDEHIK-ISTPTLVPN-LSEKRIVDIACGRGHSLALTSDGKVYAWGENNYGQIND 205
Query: 213 SE--MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMK 270
ISTP + +V +A ++ D+ +YSWG + +
Sbjct: 206 ESGFSFISTPFQVKHELENKNVVYIACDLLCNIVITDKNEIYSWGENDRNKMRNNASHCC 265
Query: 271 P--TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
P +I ST++ K+ + G +TN G +Y WG N +GQ+G
Sbjct: 266 PLRIIICSTIWD--------KIVKVTCGYDHTLVLTNKGDIYAWGSNHFGQIGQYDYYFI 317
Query: 329 PFP 331
FP
Sbjct: 318 KFP 320
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 37/166 (22%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G ++ T K++ G N+ Q+ E SF+ P
Sbjct: 172 RIVDIACGRGHSLALTSDG----KVYAWGENNYGQIN----------DESGFSFISTPFQ 217
Query: 63 VKH--PSTQIKHLATGRAHTIVITDNEGAFTFG--------NNSFGQCGRGIVQEEDYQG 112
VKH + + ++A IVITD +++G NN+ C I+
Sbjct: 218 VKHELENKNVVYIACDLLCNIVITDKNEIYSWGENDRNKMRNNASHCCPLRII------- 270
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
C I D KI+ CG DHTL LT G +Y+ G GQ G
Sbjct: 271 --ICSTIWD----KIVKVTCGYDHTLVLTNKGDIYAWGSNHFGQIG 310
>gi|118403980|ref|NP_001072233.1| uncharacterized protein LOC779680 [Xenopus (Silurana) tropicalis]
gi|110645409|gb|AAI18820.1| hypothetical protein MGC146459 [Xenopus (Silurana) tropicalis]
Length = 349
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 20/249 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G NS+GQ G G Q D + + E I G H+ +TESG+VY C
Sbjct: 12 YAWGANSYGQLGVGSTQ--DTPVPQLVIGLPNHE-TVIRSISAGGGHSAAVTESGRVYVC 68
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G ++GQ GL H + CL G + G R+ K+S D L +++ G++ G + Y Q
Sbjct: 69 GQNSEGQLGLDHTTDVTQFCLCPGAL-GLRVSKVSCGWDFTLILAETGELLSCGANTYSQ 127
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
+ + S PR + K +++DVA+G L D G ++ WG GL +R
Sbjct: 128 LGRAGAGRSCVPRPVGIQK--RKVIDVAAGLRHVLALTDNGQIFQWGSGLASH----ARR 181
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYGQLGLG 323
P ++G + P +E + T G A+++ G +Y WG N++GQL
Sbjct: 182 FSPQNPIPPVYGATEPCPVPGMEGICGKVVTAGSYHCVALSDAGDMYAWGSNKHGQL--- 238
Query: 324 TVEDQPFPL 332
+ PF L
Sbjct: 239 -LHPDPFLL 246
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 27/302 (8%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L+ G NS QLG + P +LV+ + T I+ ++ G H+ +T++
Sbjct: 11 LYAWGANSYGQLGVGSTQDTPVP-QLVIGL-------PNHETVIRSISAGGGHSAAVTES 62
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ G NS GQ G + FC L G ++ CG D TL L E+G++
Sbjct: 63 GRVYVCGQNSEGQLGL----DHTTDVTQFCLCPGAL-GLRVSKVSCGWDFTLILAETGEL 117
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
SCG Q G P V I+ +++ +++ + VLA++D G +F WG+
Sbjct: 118 LSCGANTYSQLGRAGAGRSCVPRPV--GIQKRKVIDVAAGLRHVLALTDNGQIFQWGSGL 175
Query: 207 YGQISESEMQISTPRVLSQCK-----GVSRIVD--VASGGSACTMLNDEGLVYSWGYGLL 259
Q P V + G+ I V +G C L+D G +Y+WG
Sbjct: 176 ASHARRFSPQNPIPPVYGATEPCPVPGMEGICGKVVTAGSYHCVALSDAGDMYAWGSNKH 235
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
GQ P L+ H F +S V ++ +G A T+ G ++ WG+ Y Q
Sbjct: 236 GQ----LLHPDPFLLHPHRVQAHFFLGESIV-AVTSGWTHLVAQTDTGKVFTWGRANYSQ 290
Query: 320 LG 321
LG
Sbjct: 291 LG 292
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 36/275 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I+ G G + T+S +++ CG NS+ QLG V F P +
Sbjct: 46 IRSISAGGGHSAAVTESG----RVYVCGQNSEGQLGLDHTTD-------VTQFCLCPGAL 94
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ ++ G T+++ + + G N++ Q GR G+ ++
Sbjct: 95 ---GLRVSKVSCGWDFTLILAETGELLSCGANTYSQLGRAGA------GRSCVPRPVGIQ 145
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADG-------QTGLGHLNNQETPCLVRGEIE 176
K++D G H L LT++G+++ G G Q + + PC V G +E
Sbjct: 146 KRKVIDVAAGLRHVLALTDNGQIFQWGSGLASHARRFSPQNPIPPVYGATEPCPVPG-ME 204
Query: 177 G--ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIV 233
G ++V S CV A+SD GD++ WG++++GQ+ + + P RV + IV
Sbjct: 205 GICGKVVTAGS-YHCV-ALSDAGDMYAWGSNKHGQLLHPDPFLLHPHRVQAHFFLGESIV 262
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
V SG + D G V++WG Y LG+ P
Sbjct: 263 AVTSGWTHLVAQTDTGKVFTWGRANYSQLGRPPST 297
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++++ ++CG+ FT++ ++ + L CG N+ SQLG + +P
Sbjct: 96 LRVSKVSCGWDFTLILAETGE----LLSCGANTYSQLGRAGAGRSC-----------VPR 140
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHN 118
PV ++ +A G H + +TDN F +G+ R Q Y C
Sbjct: 141 PVGIQKRKVIDVAAGLRHVLALTDNGQIFQWGSGLASHARRFSPQNPIPPVYGATEPC-P 199
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE---- 174
+ +EG G H + L+++G +Y+ WG++ L H + P L+
Sbjct: 200 VPGMEGICGKVVTAGSYHCVALSDAGDMYA--WGSNKHGQLLHPD----PFLLHPHRVQA 253
Query: 175 --IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
GE IV ++S ++A +D G VF WG + Y Q+
Sbjct: 254 HFFLGESIVAVTSGWTHLVAQTDTGKVFTWGRANYSQL 291
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
L+Y+WG YG LG G S + T +P + G N ++ + S+ AG A+T
Sbjct: 10 LLYAWGANSYGQLGVG-----STQDTPVPQLVIGLP--NHETVIRSISAGGGHSAAVTES 62
Query: 307 GHLYMWGKNQYGQLGLGTVED 327
G +Y+ G+N GQLGL D
Sbjct: 63 GRVYVCGQNSEGQLGLDHTTD 83
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
LY WG N YGQLG+G+ +D P P V
Sbjct: 11 LYAWGANSYGQLGVGSTQDTPVPQLV 36
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 42/313 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N+ QLG ++ R+P V S + +A G +H++ I +
Sbjct: 53 VWAAGSNTSGQLGDGTTSER-----------RVPAQVVGLSDAVL-VAAGSSHSLAIRSD 100
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGK 145
A+ +G+N G+ G G + G +AV D H+L + G
Sbjct: 101 GTAWAWGHNGSGELGDGTTFRRTRP--------VQVTGLSEAEAVAAGDGHSLVVRSDGT 152
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ GW +DGQ G G + P V G G VK+++ LAV G V+ WG +
Sbjct: 153 VWAWGWNSDGQLGDGTTRERHVPVQVAGLSGG---VKVAAGDGHSLAVCLDGTVWAWGRN 209
Query: 206 EYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
+ GQ+ + + +Q S P Q G+S +V VA+G S + +G V++WG G LG
Sbjct: 210 DSGQLGDGTTVQRSAP---VQVAGLSGVVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGD 266
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G +R L P Q S ++ AG A+ + G ++ WG+N GQLG
Sbjct: 267 GTTSAR-----LTPV------QVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLG 315
Query: 322 LGTVEDQPFPLKV 334
G++ P++
Sbjct: 316 DGSMTASLTPVQA 328
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 34/310 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G NSD QLG + S P+ V S + +A G H++ + +
Sbjct: 253 VWAWGRNSDGQLG-----------DGTTSARLTPVQVTGLSGGVA-VAAGMFHSLAVRSD 300
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +G N+ GQ G G + I EGE + G+ H+L G V
Sbjct: 301 GTVWAWGQNTRGQLGDGSMTASLTP----VQAIGLSEGEAV---AAGETHSLVARSDGTV 353
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G +GQ G G P V + G V A LAV G V+ WG +
Sbjct: 354 WAWGNNIEGQRGDGSAKTSTAPVQVT-ALSGGFTVAAGKA--HALAVRSDGTVWAWGQNL 410
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKV 265
+GQ+ + + MQ + P Q G+S V VA+G L +G V++WG GQ
Sbjct: 411 FGQLGDGTRMQRTAP---VQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDG 467
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ + +P + Q S V ++ AG A+++ G ++ WG N GQLG GT
Sbjct: 468 TTAQRPAPV--------QVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTT 519
Query: 326 EDQPFPLKVA 335
+ P++VA
Sbjct: 520 RARLTPVQVA 529
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 144/331 (43%), Gaps = 44/331 (13%)
Query: 12 GFTVVATKSKDKNLK----LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
GFTV A K+ ++ ++ G N QLG ++ P++ V S
Sbjct: 384 GFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQ-----------VTGLS 432
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ +A G H++ + + + +G N+ GQ G G + + +L G +
Sbjct: 433 GGVA-VAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAP-----VQVTELSG--V 484
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G H+L ++ G V++ G A GQ G G + TP V G + G +V +++
Sbjct: 485 VAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAG-LSG--VVAVAAGY 541
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LAV G V+ WGN+ + Q+ + + Q TP + G+S V A+G +L
Sbjct: 542 FHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTP---VRVPGLSGGVAAAAGYFHSLVLR 598
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G V+ WG YG LG G + S P Q S ++ AG A+
Sbjct: 599 SDGTVWGWGNNAYGQLGNG-TANASFSPV----------QVTGLSGGVAVAAGDFQSLAV 647
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G + WG N YGQLG GTV + P+ V
Sbjct: 648 RSDGTVRAWGDNIYGQLGDGTVTTRLAPVGV 678
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 140/338 (41%), Gaps = 62/338 (18%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL------FGCGLNSDSQLGYHDPRKKGNPLELVMS 55
+++T ++ G V D +L L + G N+ QLG ++
Sbjct: 426 VQVTGLSGG----VAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQR--------- 472
Query: 56 FVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
P PV+ + + +A G +H++ ++ + + +G+N+ GQ G G + +
Sbjct: 473 ----PAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRA-----RL 523
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+A L G ++ G H+L + G V++ WG + LG N + P VR
Sbjct: 524 TPVQVAGLSG--VVAVAAGYFHSLAVRSDGTVWA--WGNNSFFQLGDGTNTQRPTPVR-- 577
Query: 175 IEGERIVKLSSAVDCV------LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKG 228
+ LS V L + G V+GWGN+ YGQ+ S V Q G
Sbjct: 578 -----VPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPV--QVTG 630
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+S V VA+G + +G V +WG YG LG G +R + P + N
Sbjct: 631 LSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTR-LAPVGV----------N 679
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
S ++ AG A+ + G L+ WG N GQLG G
Sbjct: 680 GLSGGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHG 717
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
+ +A G H++V + + +GNN GQ G G + + L G + A
Sbjct: 335 EAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP-----VQVTALSGGFTVAA 389
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G+ H L + G V++ G GQ G G + P V G G V +++ D
Sbjct: 390 --GKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGG---VAVAAGDDHS 444
Query: 191 LAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
L + G V+ WG + GQ+ + + Q P +++ GV V VA+G S ++ +G
Sbjct: 445 LGLCLDGTVWAWGQNTSGQLGDGTTAQRPAPVQVTELSGV---VAVAAGTSHSLAVSSDG 501
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WG G LG G +R L P + G S V ++ AG A+ +
Sbjct: 502 TVWAWGSNASGQLGDGTTRAR-----LTPVQVAG------LSGVVAVAAGYFHSLAVRSD 550
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N + QLG GT +P P++V
Sbjct: 551 GTVWAWGNNSFFQLGDGTNTQRPTPVRV 578
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N+ QLG R + P+++ + + +A G H++ + +
Sbjct: 503 VWAWGSNASGQLGDGTTRARLTPVQVA------------GLSGVVAVAAGYFHSLAVRSD 550
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +GNNSF Q G G + + + L G + A G H+L L G V
Sbjct: 551 GTVWAWGNNSFFQLGDGTNTQRPTPVR-----VPGLSGG--VAAAAGYFHSLVLRSDGTV 603
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
+ G A GQ G G N +P V G G V +++ LAV G V WG++
Sbjct: 604 WGWGNNAYGQLGNGTANASFSPVQVTGLSGG---VAVAAGDFQSLAVRSDGTVRAWGDNI 660
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ----G 262
YGQ+ + ++T G+S + VA+G ++ G++++WGY GQ G
Sbjct: 661 YGQLGDGT--VTTRLAPVGVNGLSGGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHGG 718
Query: 263 PKV 265
P V
Sbjct: 719 PSV 721
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 112 GKWFCHNIADL---EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
G W A+ EG+ + A G H+L + G V++ G GQ G G + + P
Sbjct: 18 GLWLALGWAEAGADEGKSRLAA--GGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVP 75
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKG 228
V G + V +++ LA+ G + WG++ G++ + T V Q G
Sbjct: 76 AQVVGLSD---AVLVAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPV--QVTG 130
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+S VA+G ++ +G V++WG+ G LG G R +P + G +
Sbjct: 131 LSEAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERH-----VPVQVAG---LS 182
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
KV AG A+ G ++ WG+N GQLG GT + P++VA
Sbjct: 183 GGVKVA---AGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVA 229
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G +S+GQ G G I+ E G F H+ + + CG +H++FL E G+V
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYG--FIHD------RNVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + G+ IV ++ +A+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHDCEGSKPEQI-GALAGQHIVHVACGESHSVALSDQGQLFSWGAGS 112
Query: 207 YGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ + ++ ++ PR++ + + I+ V+ G C L +G ++WG YG LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQT-ILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V AG A++ G ++ WGKN GQLG
Sbjct: 172 GKECPSQASPQRVKS-LDGI----PLAQVA---AGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L D+ P V +
Sbjct: 224 LSDERDRESPCHVKL 238
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L G+ I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKPEQ-------IGALAGQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG+ H++ L++ G+++S G G+DGQ GL + + T + ++ + I+++S
Sbjct: 89 VACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G F WG + YGQ+ E Q S RV S G+ + VA+GG+ L+
Sbjct: 149 CLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIP-LAQVAAGGAHSFALS 206
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V+ WG GQ G R + L Q KV + G +T
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG HD +G+ E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLG-HDC--EGSKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 83 ---GQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVSQIACGRHHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG D R + +P + +R S ++ +++ G HT V+T +
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCH--VKLLR--------SQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G G GQ G GH N + P V+G
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 750
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
+ ++ G N + QLG R++ +P+PV S+ + +A GR H++
Sbjct: 414 SDATVWAWGRNYEGQLGDGTTRRR-----------EVPVPVPKLSSVVA-VAAGRYHSLA 461
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ + + +G+N +GQ G G + + +L G + A G++H+L L
Sbjct: 462 VRFDGTVWAWGDNEYGQVGDGTETSRKAPVR-----VPNLGGGVAVAA--GENHSLVLRS 514
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V++ G GQ G G ++ P V+G G V +++ LAV G V+ W
Sbjct: 515 DGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGG---VAVAAGQYYSLAVRSDGTVWAW 571
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLL 259
G + GQ+ + S V Q G+S V VA+G S ++ +G V++WG G +
Sbjct: 572 GLNFEGQLGDGTASDSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQV 631
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G+G R + P Q S+ ++ AG A+ + G ++ WG N G
Sbjct: 632 GEGAPRRRVLMPV----------QVQGLSEGMAVAAGYNHSLAVRSDGSVWAWGGNTAGV 681
Query: 320 LGLGTVEDQPFPLK 333
LG GT + + P++
Sbjct: 682 LGDGTTDRRTVPVQ 695
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 43/299 (14%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
+ + + +P+ V S + +A +H + + + + +G N +GQ G G E
Sbjct: 331 DTIETMSTVPVQVPGLSGGVTVVAA-SSHALAVRSDGTVWAWGGNHYGQLGDGTTSE--- 386
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
+ + L G +M Q+H+L + V++ G +GQ G G +E P
Sbjct: 387 --RLVAVPVQGLSG--VMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVPVP 442
Query: 171 VRGEIEGERIVKLSSAVDCV------LAVSDKGDVFGWGNSEYGQISE-SEMQISTP-RV 222
V KLSS V LAV G V+ WG++EYGQ+ + +E P RV
Sbjct: 443 VP---------KLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRV 493
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLF 279
+ GV+ VA+G + +L +G V++WG YG LG G S S P
Sbjct: 494 PNLGGGVA----VAAGENHSLVLRSDGTVWAWGGNHYGQLGNG-ITSDSPVPV------- 541
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
Q S ++ AG A+ + G ++ WG N GQLG GT D P P++V V G
Sbjct: 542 ---QVQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPG 597
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P PV S + +A G H++ + + + +G+N GQ G G +
Sbjct: 137 VPAPVPGLSGGVA-VAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNVSLVPVR----- 190
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G ++ G+ H+L + G V++ G+ G G G ++++ P V+G G
Sbjct: 191 VKKLTG--VVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVPVQVQGLSGG- 247
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP--RVL--SQCKGVSRIVD 234
V ++ V LAV G V+GWG + GQ+ + TP RVL Q +G+S +
Sbjct: 248 --VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGD-----GTPMRRVLVPVQAQGLSGVEA 300
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA+G S + +G V++WG YG LG + S P +P G
Sbjct: 301 VAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSGG----------V 350
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++A A+ + G ++ WG N YGQLG GT ++ + V
Sbjct: 351 TVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLVAVPV 393
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 39/263 (14%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
+ATG H+ + + + G N FGQ G G E + L G ++
Sbjct: 49 ARIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERR-----VPVQVQGLSG--VVAV 101
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G H+L L G V++ G A Q G G ++ P V G G V +++
Sbjct: 102 AVGAYHSLALRSDGTVWAVG-RAACQGGDGTASDCTVPAPVPGLSGG---VAVAAGGLHS 157
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
LA+ G V+ WG++ GQ+ + +S V + K ++ +V VA+G + +G
Sbjct: 158 LALRSDGTVWAWGSNFEGQLGDGTTNVSL--VPVRVKKLTGVVAVAAGEKHSLAVRSDGT 215
Query: 251 VYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG------ 301
V++W GYG LG G SR + +V+ L G G
Sbjct: 216 VWTWGFNGYGALGDGTTSSRKV-----------------PVQVQGLSGGVAVAGGVYHSL 258
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
A+ + G ++ WG N GQLG GT
Sbjct: 259 AVRSDGTVWGWGANGVGQLGDGT 281
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G +H+ + G V++ G GQ G G + + P V+G + G +V ++ L
Sbjct: 53 TGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQG-LSG--VVAVAVGAYHSL 109
Query: 192 AVSDKGDVFGWGNS--EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A+ G V+ G + + G + S+ + P G+S V VA+GG L +G
Sbjct: 110 ALRSDGTVWAVGRAACQGGDGTASDCTVPAP-----VPGLSGGVAVAAGGLHSLALRSDG 164
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WG G LG G + +L+P + + V ++ AG A+ +
Sbjct: 165 TVWAWGSNFEGQLGDG-----TTNVSLVPV------RVKKLTGVVAVAAGEKHSLAVRSD 213
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N YG LG GT + P++V
Sbjct: 214 GTVWTWGFNGYGALGDGTTSSRKVPVQV 241
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V+ S + +A G+ +++ + + + +G N GQ G G +
Sbjct: 539 VPVQVQGLSGGVA-VAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVP---VRVQ 594
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEG 177
+ L G + A G H L + G V++ G DGQ G G + P V+G EG
Sbjct: 595 VPGLSGGVAVAA--GTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG 652
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +++ + LAV G V+ WG + G + + T V Q +G++ VA+
Sbjct: 653 ---MAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRT--VPVQAQGLTGARAVAA 707
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ 261
G S +L +G ++ G GQ
Sbjct: 708 GESHSLVLRSDGTGWAMGSNASGQ 731
>gi|147919953|ref|YP_686293.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621689|emb|CAJ36967.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 439
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 44/336 (13%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+I I+ I GYG+TV+ ++ G N QLG + + N + F +IP
Sbjct: 87 LIGISSIDGGYGYTVILRNDG----TVWTSGNNDAGQLGQRN--RADNAV-----FTQIP 135
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ + + G H + + + +++G+NSFGQ G G K A
Sbjct: 136 -----NMSNVARIDAGEGHVLALKVDGTVWSWGDNSFGQLGNG--------SKALTGEPA 182
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ G + + ++ T + Y+ G GQ G G N+ TP VR +
Sbjct: 183 RVMGVQGIRSIAAGGRHSIATYGMEAYAWGDNLFGQLGDGTYNSSNTPVKVRIN----EV 238
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+++ LA+ + G V+ WG ++YGQ+ + S V +C + + +A+
Sbjct: 239 TDVAAGEYHSLALLEDGTVWAWGGNDYGQLGDGIPNNSLVPV--KCGNLRNVKTIAASDR 296
Query: 241 ACTMLNDEGLVYSWGY---GLLGQGPKVS-RSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L +G V++WGY G+LG G + R +P Q ++ + A
Sbjct: 297 YSLALKYDGTVWAWGYNGNGVLGTGSADNERHPEPV----------QVKGLYDIKKIYAA 346
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
P AI +G++++WG NQ+GQLG GT D+ P+
Sbjct: 347 PTGCMAIDTYGNVWVWGMNQFGQLGDGTKTDRYSPV 382
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 30/273 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + G +T+++ ++ +T GNN GQ G Q F I ++ +D
Sbjct: 90 ISSIDGGYGYTVILRNDGTVWTSGNNDAGQLG----QRNRADNAVFTQ-IPNMSNVARID 144
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G+ H L L G V+S G + GQ G G P V G ++G R S A
Sbjct: 145 A--GEGHVLALKVDGTVWSWGDNSFGQLGNGSKALTGEPARVMG-VQGIR----SIAAGG 197
Query: 190 VLAVSDKG-DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+++ G + + WG++ +GQ+ + S V + ++ + DVA+G L ++
Sbjct: 198 RHSIATYGMEAYAWGDNLFGQLGDGTYNSSNTPVKVR---INEVTDVAAGEYHSLALLED 254
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V++WG YG LG G IP+ + V+++ A A+
Sbjct: 255 GTVWAWGGNDYGQLGDG-----------IPNNSLVPVKCGNLRNVKTIAASDRYSLALKY 303
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
G ++ WG N G LG G+ +++ P V V G
Sbjct: 304 DGTVWAWGYNGNGVLGTGSADNERHPEPVQVKG 336
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSS-- 185
A G + G +++ G +GQ G G N+ P L++ ++ G ++ +SS
Sbjct: 35 AYLGDGCGFMIKNDGSLWAWGNNNNGQLGDGTYINRLVPVLIKDYTDLLGGNLIGISSID 94
Query: 186 -AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ + + G V+ GN++ GQ+ + + V +Q +S + + +G
Sbjct: 95 GGYGYTVILRNDGTVWTSGNNDAGQLGQRNRADNA--VFTQIPNMSNVARIDAGEGHVLA 152
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V+SWG +G LG G K T P+ + G + S+ AG
Sbjct: 153 LKVDGTVWSWGDNSFGQLGNGSKAL-----TGEPARVMGVQ------GIRSIAAGGRH-- 199
Query: 302 AITNFG-HLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+I +G Y WG N +GQLG GT P+KV +
Sbjct: 200 SIATYGMEAYAWGDNLFGQLGDGTYNSSNTPVKVRI 235
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 36/264 (13%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGI-------VQEEDYQGKWFCHNIADLEGEKIMDAVC- 132
+I ++ + +GNN+ GQ G G V +DY DL G ++
Sbjct: 43 FMIKNDGSLWAWGNNNNGQLGDGTYINRLVPVLIKDY---------TDLLGGNLIGISSI 93
Query: 133 --GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G +T+ L G V++ G GQ LG N + + + ++ + V
Sbjct: 94 DGGYGYTVILRNDGTVWTSGNNDAGQ--LGQRNRADNAVFTQ-IPNMSNVARIDAGEGHV 150
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
LA+ G V+ WG++ +GQ+ ++ ++ GV I +A+GG + G+
Sbjct: 151 LALKVDGTVWSWGDNSFGQLGNGSKALTGEP--ARVMGVQGIRSIAAGGRHS--IATYGM 206
Query: 251 -VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
Y+WG L GQ + + T + + ++V + AG A+ G +
Sbjct: 207 EAYAWGDNLFGQLGDGTYNSSNTPVKVRI---------NEVTDVAAGEYHSLALLEDGTV 257
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLK 333
+ WG N YGQLG G + P+K
Sbjct: 258 WAWGGNDYGQLGDGIPNNSLVPVK 281
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 47/280 (16%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ I+ +A G H++ +T + ++FG FG+ G G + K +EG
Sbjct: 78 SDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKK--------IEGLSD 129
Query: 128 MDAVCGQD-HTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLS 184
+ A+ D H+L LT+SG VYS G +G +GLGH N +Q TP + + + ++
Sbjct: 130 IQAIAAGDFHSLALTKSGDVYSFG---NGTSGLGHGNTEDQSTPKKIESLSD---VQAIA 183
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ + LA++ GDV+ +G +G++ +++ Q+ ++ + +S I +A+GG+
Sbjct: 184 AGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKI----EDLSDIQAIAAGGNHS 239
Query: 243 TMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPK-----SKVESLI 294
L G VYS+G+GL LG G ++Q PK S ++++
Sbjct: 240 LALTKSGDVYSFGWGLHGQLGHGDT----------------ENQLTPKKIEDLSDIQAVA 283
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+T G +Y +G+ GQLG G +DQ P K+
Sbjct: 284 AGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKI 323
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC-GQDHTLFLTESGKVYS 148
F+FG +G+ G G + K +EG + A+ G +H+L LT+SG VYS
Sbjct: 50 FSFGMGMYGKLGHGDTANQLAPKK--------IEGLSDIQAIAAGTNHSLALTKSGDVYS 101
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC-VLAVSDKGDVFGWGNSEY 207
G+G G+ G G+ ++Q P +IEG ++ +A D LA++ GDV+ +GN
Sbjct: 102 FGFGLFGRLGHGNTDSQLEPK----KIEGLSDIQAIAAGDFHSLALTKSGDVYSFGNGTS 157
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQGPK 264
G + STP+ + + +S + +A+GG+ L G VYS+G+GL LG G
Sbjct: 158 GLGHGNTEDQSTPK---KIESLSDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDT 214
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
S+ ++P I S ++++ AG A+T G +Y +G +GQLG G
Sbjct: 215 DSQ-LEPKKIEDL----------SDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGD 263
Query: 325 VEDQPFPLKV 334
E+Q P K+
Sbjct: 264 TENQLTPKKI 273
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 33/261 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA G ++ TKS D + FG G S LG+ + + P ++
Sbjct: 130 IQAIAAGDFHSLALTKSGD--VYSFGNGT---SGLGHGNTEDQSTPKKI----------- 173
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ++ +A G H++ +T + ++FG FG+ G G D + I DL
Sbjct: 174 -ESLSDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHG-----DTDSQLEPKKIEDLS 227
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
I G +H+L LT+SG VYS GWG GQ G G NQ TP + + I +
Sbjct: 228 --DIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIE---DLSDIQAV 282
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ + LA++ G+V+ +G GQ+ +++ Q+ TP+ + +G+ I +A+G
Sbjct: 283 AAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQL-TPK---KIEGLKDIQAIAAGDFH 338
Query: 242 CTMLNDEGLVYSWGYGLLGQG 262
L G VYS+G G G G
Sbjct: 339 SLALTKSGDVYSFGNGTSGLG 359
>gi|405977937|gb|EKC42361.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 950
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 29/315 (9%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG T++ S + ++ G + QLG N EL R+ L +P
Sbjct: 54 VACGASHTILVNDSNE----IYSWGNGNSGQLGT-------NVKELQWQPERVHLYDNNP 102
Query: 67 ST--QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
T + +A G H++V N F+FGNN Q G + + + H + L
Sbjct: 103 VTLPDVAGVACGGRHSMVWLSNGNVFSFGNNFHAQLGYDYRSKNYKENQVKPHLLKILIH 162
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
++ CG+ H+LF + G + G A+GQ G G L P LV EI + + ++
Sbjct: 163 RPVVQISCGEKHSLFRFQDGTIACVGSNANGQIGNGTLEEVTVPVLV--EI-ADPVKYVA 219
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQ-ISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S + LA++ +GDVF WG YG+ I +P + + ++V+V+ G +
Sbjct: 220 SGANHNLAITCQGDVFMWG---YGKGCGNKNKDILSPEKVPLKR---KVVEVSGGATHSL 273
Query: 244 MLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L+ G +Y WG GL GQ G S + + P L +H +S V+ + AG A
Sbjct: 274 ALSGSGNIYVWGSGLDGQLGLGNSNTFQS--FPKKL--KHPELRRSVVK-IQAGEYYSTA 328
Query: 303 ITNFGHLYMWGKNQY 317
IT G L++WGKN +
Sbjct: 329 ITESGSLFIWGKNSH 343
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 20/272 (7%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
Q+K +A G +HTI++ D+ +++GN + GQ G + + + + ++ + +
Sbjct: 50 QVKFVACGASHTILVNDSNEIYSWGNGNSGQLGTNVKELQWQPERVHLYDNNPVTLPDVA 109
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-----NQETPCLVRGEIEGERIVKL 183
CG H++ +G V+S G Q G + + NQ P L++ I +V++
Sbjct: 110 GVACGGRHSMVWLSNGNVFSFGNNFHAQLGYDYRSKNYKENQVKPHLLKILIH-RPVVQI 168
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S L G + G++ GQI ++ T VL + + VASG +
Sbjct: 169 SCGEKHSLFRFQDGTIACVGSNANGQIGNGTLEEVTVPVLVEI--ADPVKYVASGANHNL 226
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+ +G V+ WGYG G G K + P +P K KV + G A+
Sbjct: 227 AITCQGDVFMWGYG-KGCGNKNKDILSPEKVPL----------KRKVVEVSGGATHSLAL 275
Query: 304 TNFGHLYMWGKNQYGQLGLGTVED-QPFPLKV 334
+ G++Y+WG GQLGLG Q FP K+
Sbjct: 276 SGSGNIYVWGSGLDGQLGLGNSNTFQSFPKKL 307
>gi|281353189|gb|EFB28773.1| hypothetical protein PANDA_018862 [Ailuropoda melanoleuca]
Length = 318
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 117/263 (44%), Gaps = 26/263 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I+ + G H+ V+TD+ G F G N GQ G G ED C ++ D I
Sbjct: 31 IRRITGGGGHSAVVTDDGGLFVCGLNKDGQLGLG--HTEDVLYFTACRSLLDC---PIQQ 85
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAV 187
CG D T+ LTESG+V SCG + GQ G+ H + C+V IE E++V +++ +
Sbjct: 86 VACGWDFTIILTESGQVLSCGSNSFGQLGVPHGPRR---CMVPQAIELLSEKVVCIAAGL 142
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--- 244
LA + G VF WG + P L+ K SR+ + + + C +
Sbjct: 143 RHALAATASGIVFQWGTGLASSGRRLCPGQTLPPFLTA-KEPSRVTGLENSKATCVLAGS 201
Query: 245 -----LNDEGLVYSWGYGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L D G +Y WG GQ ++ + P I + F KV S+ +G
Sbjct: 202 DHSASLTDAGELYVWGSNKHGQLASLAAFLPMPQKIEAHCF------QNEKVTSVWSGWT 255
Query: 299 TFGAITNFGHLYMWGKNQYGQLG 321
A T G ++ WG+ YGQLG
Sbjct: 256 HLVAQTETGKVFTWGRADYGQLG 278
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I G G + V T LF CGLN D QLG E V+ F +
Sbjct: 31 IRRITGGGGHSAVVTDDGG----LFVCGLNKDGQLGL-------GHTEDVLYFTACRSLL 79
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG------RGIVQEEDYQGKWFCH 117
P I+ +A G TI++T++ + G+NSFGQ G R +V +
Sbjct: 80 DCP---IQQVACGWDFTIILTESGQVLSCGSNSFGQLGVPHGPRRCMVPQA--------- 127
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+L EK++ G H L T SG V+ G G +G Q P + + E
Sbjct: 128 --IELLSEKVVCIAAGLRHALAATASGIVFQWGTGL-ASSGRRLCPGQTLPPFLTAK-EP 183
Query: 178 ERIVKL-SSAVDCVLA-------VSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKG 228
R+ L +S CVLA ++D G+++ WG++++GQ++ + P ++ + C
Sbjct: 184 SRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLASLAAFLPMPQKIEAHCFQ 243
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
++ V SG + + G V++WG YG LG+
Sbjct: 244 NEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGR 279
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 89/237 (37%), Gaps = 62/237 (26%)
Query: 155 GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---- 210
GQ GLGH + P + + E I +++ V+D G +F G ++ GQ+
Sbjct: 6 GQLGLGHKEDVFLPQQLNDFCKPECIRRITGGGGHSAVVTDDGGLFVCGLNKDGQLGLGH 65
Query: 211 SESEMQISTPRVLSQCK-------------------------------GV---------- 229
+E + + R L C GV
Sbjct: 66 TEDVLYFTACRSLLDCPIQQVACGWDFTIILTESGQVLSCGSNSFGQLGVPHGPRRCMVP 125
Query: 230 -------SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS--RSMKPTLI---PST 277
++V +A+G G+V+ WG GL G ++ +++ P L PS
Sbjct: 126 QAIELLSEKVVCIAAGLRHALAATASGIVFQWGTGLASSGRRLCPGQTLPPFLTAKEPSR 185
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G SK ++AG ++T+ G LY+WG N++GQL P P K+
Sbjct: 186 VTGLE----NSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SLAAFLPMPQKI 237
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 125/257 (48%), Gaps = 23/257 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
LA G HT VIT N+ + FG N +GQ G G + K C + L+ EK+ C
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLG---SKSAVCKPTC--VKALKPEKVKHVAC 88
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG ++ T L+ + +LS+ + A
Sbjct: 89 GRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAA 148
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG + GQI + + + P ++ K ++ I + G + EG +
Sbjct: 149 LTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKPIAWI---SCGYYHSAFVTMEGEL 205
Query: 252 YSWG---YGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
Y++G +G LG ++ + K P L+P P+ ++ G T +
Sbjct: 206 YTFGEPEFGKLGLPKQLLMNHKVPQLVPGI--------PEKVIQVACGGGHT--VVLTEK 255
Query: 308 HLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 256 AVYNFGLGQFGQLGLGT 272
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 146/324 (45%), Gaps = 36/324 (11%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T +ACG T V T +K KL+ G N QLG P + V+ P K
Sbjct: 32 TFLACGDEHTAVITGNK----KLYMFGRNDWGQLGLGSKSAVCKP-----TCVKALKPEK 82
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+KH+A GR HT+V T+ + G N+ GQ G G D + + H I
Sbjct: 83 -----VKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLG-----DTEDRNTFHLIEFFTS 132
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ + G + + LTE GK++ G ++GQ GL ++ N P V G+ I +
Sbjct: 133 QHQFKQLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEV---TVGKPIAWI 189
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSAC 242
S V+ +G+++ +G E+G++ + + +V G+ +++ VA GG
Sbjct: 190 SCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQVACGGGHT 249
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L E VY++G +G LG G V + +P ++ S K+ + G
Sbjct: 250 VVLT-EKAVYNFGLGQFGQLGLGTFVFETTEPKIMESV--------KDHKITYISCGENH 300
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G +YG+LGLG
Sbjct: 301 TALITDIGRMYTFGDGRYGKLGLG 324
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T + L FG + + G K G P +L+M+ ++P V
Sbjct: 189 ISCGYYHSAFVTMEGE--LYTFG-----EPEFG-----KLGLPKQLLMNH-KVPQLVPGI 235
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K + ++ K
Sbjct: 236 PEKVIQVACGGGHTVVLTE-KAVYNFGLGQFGQLGLGTFVFETTEPKI----MESVKDHK 290
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +T+ G++Y+ G G G+ GLG N NQ P L
Sbjct: 291 ITYISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTL 336
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
++ +G +++GQ+ S+ + P + K ++ VA G + + + G VY+ G
Sbjct: 50 LYMFGRNDWGQLGLGSKSAVCKPTCVKALKP-EKVKHVACGRNHTLVSTEGGKVYAVGGN 108
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G R+ + QHQF + L AG T A+T G L+MWG+
Sbjct: 109 NEGQLGLGDTEDRNTFHLI--EFFTSQHQF------KQLSAGSNTSAALTEDGKLFMWGE 160
Query: 315 NQYGQLGLGTVEDQPFPLKVAVG 337
N GQ+GL V + FP +V VG
Sbjct: 161 NSEGQIGLNNVCNVYFPHEVTVG 183
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 150/339 (44%), Gaps = 46/339 (13%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ IT +A G G +V + + ++ G N QLG + + IP
Sbjct: 459 LAAITALATGDGHSV----AVGSDGGIWAWGDNRRGQLGIG-----------ITATREIP 503
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ ++ I LA G +H++ + N +T+G+N++GQ G G + A
Sbjct: 504 VQATGLAS-ISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDR--------ATAA 554
Query: 121 DLEG-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G I G H+L L G V+ G GQ G G + +++TP V G + R
Sbjct: 555 QVPGLTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSG-LSAMR 613
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASG 238
V+ A +AV G V+ WGN+++GQ+ + + T R + Q G++ + VA G
Sbjct: 614 AVEAGPAHS--VAVHLNGTVWVWGNNDFGQLGDGTV---TSRAMPVQVSGLTGVTAVAVG 668
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
L ++G +++WGY G LG G +S P +P + V +L A
Sbjct: 669 VYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQS-TPAQVPG----------LTGVIALAA 717
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A+ G ++ WG N +GQLG GT + P +V
Sbjct: 718 GNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQV 756
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 42/333 (12%)
Query: 15 VVATKSKDKNLKLFG---CGLNSDSQL---GYHDPRKKGNPLELVMSFVRIPLPVKHPST 68
VA D +L + G L SD + GY+ R+ G+ + + P+ V T
Sbjct: 355 AVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRT---TPVQVSE-LT 410
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIADLEGEK 126
L G H +V+ + + +G+NS GQ G G+ V+ + Q ++ L
Sbjct: 411 GGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQ-------VSGLA--A 461
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G H++ + G +++ G GQ G+G +E P G I L++
Sbjct: 462 ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLAS---ISALAAG 518
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA+ G V+ WG++ YGQ+ + + + +T +Q G++ I +A+G L
Sbjct: 519 DSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATA---AQVPGLTDITALAAGNHHSLAL 575
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
++G V+ WG +G LG G SR Q + S + ++ AGP A
Sbjct: 576 RNDGTVWVWGSNDFGQLGDGTVTSRKTP-----------VQVSGLSAMRAVEAGPAHSVA 624
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G +++WG N +GQLG GTV + P++V+
Sbjct: 625 VHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVS 657
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ ++ + G AH++ + N + +GNN FGQ G G V ++ L G +
Sbjct: 610 SAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRA-----MPVQVSGLTG--V 662
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
G H+L L G +++ G+ GQ G G Q TP V G + G ++ L++
Sbjct: 663 TAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPG-LTG--VIALAAGN 719
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSACTMLN 246
LA+ G V+GWG + +GQ+ + +TPR +Q G++ ++ + +G L
Sbjct: 720 GHSLALRTDGTVWGWGANSFGQLGDG---TTTPRSTPTQVPGLTNVIALNAGAFYTVALR 776
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
E V+ WG G LG G V++ P Q + + V +L AG A+
Sbjct: 777 SERSVWEWGSKSAGQLGDG-TVTQKTTPV----------QVSGLTDVTALAAGNAHALAL 825
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG NQ GQ+G GT P P+ V+
Sbjct: 826 RTDRTVWAWGGNQRGQIGDGTASIMPAPVNVS 857
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 144/343 (41%), Gaps = 37/343 (10%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLK----LFGCGLNSDSQLGYHDPRKKGNPLELVMSF 56
+ +T +A G T VA + L+ ++ G NS QLG ++ P++ V+
Sbjct: 242 LAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQ-VLGL 300
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKW 114
T + LA G H++ + D+ + +GNNS GQ G G + Q
Sbjct: 301 -----------TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPG 349
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
IA G DH+L L G V++ G+ Q G G + TP V
Sbjct: 350 LTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSEL 409
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
G +V + + V+ SD G V+ WG++ GQ+ E + + Q G++ I
Sbjct: 410 TGGTALV--AGDLHAVVLKSD-GTVWAWGDNSSGQLGEGVTPVRAKPM--QVSGLAAITA 464
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G + +G +++WG G LG G +R IP Q + +
Sbjct: 465 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATRE-----IPV------QATGLASIS 513
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+L AG A+ G ++ WG N YGQLG GT D+ +V
Sbjct: 514 ALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQV 556
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 45/328 (13%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
++ ++ G N QLG + P V++P T + +A AH++
Sbjct: 160 RDGTVWAWGFNGSGQLGNGTATDRATP-------VQVP-----GLTSVMAVAASEAHSLA 207
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA------VCGQDH 136
+ + + +G+N +GQ G G + + + L G + A V H
Sbjct: 208 LRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQ-----VLGLAGVTALAAGGNGTTVAISAH 262
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+L L G V++ G + GQ G G + TP V G + L++ LA+ D
Sbjct: 263 SLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTS---VTALAAGAFHSLALRDD 319
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM---------LND 247
G V+ WGN+ GQ+ + V Q G++ ++ VA+GG ++ L
Sbjct: 320 GTVWAWGNNSSGQLGDGTTTARPTPV--QVPGLTSVIAVAAGGGDDSLGMRGDHSLALKS 377
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+G V++WGY L SR + P+T Q + + +L+AG + + G
Sbjct: 378 DGTVWAWGYNL-------SRQFGDGM-PATRTTPVQVSELTGGTALVAGDLHAVVLKSDG 429
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG N GQLG G + P++V+
Sbjct: 430 TVWAWGDNSSGQLGEGVTPVRAKPMQVS 457
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
DHTL L G V++ G+ GQ G G ++ TP V G ++ ++++ LA+
Sbjct: 153 DHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTS---VMAVAASEAHSLALR 209
Query: 195 DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------L 245
G V+ WG++ YGQ+ + ++ Q +TP Q G++ + +A+GG+ T+ L
Sbjct: 210 SDGTVWAWGDNGYGQLGDGTKAQRTTP---VQVLGLAGVTALAAGGNGTTVAISAHSLAL 266
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G V++WG G LG G R+ P + G + V +L AG A
Sbjct: 267 RSDGTVWAWGDNSAGQLGDGTTTERAT-----PVQVLG------LTSVTALAAGAFHSLA 315
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G ++ WG N GQLG GT +P P++V
Sbjct: 316 LRDDGTVWAWGNNSSGQLGDGTTTARPTPVQV 347
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 30/273 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T I LA G H++ + ++ + +G+N FGQ G G V + G
Sbjct: 560 TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP--------VQVSGLSA 611
Query: 128 MDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
M AV G H++ + +G V+ G GQ G G + ++ P V G + G + ++
Sbjct: 612 MRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG-LTG--VTAVAVG 668
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTML 245
V LA+ + G ++ WG + GQ+ I STP +Q G++ ++ +A+G L
Sbjct: 669 VYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTP---AQVPGLTGVIALAAGNGHSLAL 725
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G V+ WG +G LG G RS PT +P + V +L AG A
Sbjct: 726 RTDGTVWGWGANSFGQLGDGTTTPRS-TPTQVPG----------LTNVIALNAGAFYTVA 774
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + ++ WG GQLG GTV + P++V+
Sbjct: 775 LRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVS 807
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 27/269 (10%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHT 137
HT+ + + + +G N GQ G G + + G +M + H+
Sbjct: 154 HTLALRRDGTVWAWGFNGSGQLGNGTATDR--------ATPVQVPGLTSVMAVAASEAHS 205
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV------L 191
L L G V++ G GQ G G + TP V G + G + V L
Sbjct: 206 LALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLG-LAGVTALAAGGNGTTVAISAHSL 264
Query: 192 AVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+ G V+ WG++ GQ+ + + + +TP Q G++ + +A+G L D+G
Sbjct: 265 ALRSDGTVWAWGDNSAGQLGDGTTTERATP---VQVLGLTSVTALAAGAFHSLALRDDGT 321
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-IAGPCTFGAITNF 306
V++WG G LG G +R P +P L +SL + G + A+ +
Sbjct: 322 VWAWGNNSSGQLGDGTTTARP-TPVQVPG-LTSVIAVAAGGGDDSLGMRGDHSL-ALKSD 378
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++ WG N Q G G + P++V+
Sbjct: 379 GTVWAWGYNLSRQFGDGMPATRTTPVQVS 407
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
+S+A D LA+ G V+ WG + GQ+ + +TP Q G++ ++ VA+ +
Sbjct: 147 AVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATP---VQVPGLTSVMAVAASEA 203
Query: 241 ACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V++W GYG LG G K R+ ++ L G ++
Sbjct: 204 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVL--GLAGVTALAAGGNGTTVAISA 261
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ A+ + G ++ WG N GQLG GT ++ P++V
Sbjct: 262 HSL-ALRSDGTVWAWGDNSAGQLGDGTTTERATPVQV 297
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 37/265 (13%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++V+ + +T+G+N GQ G G QE+ + + L G + A GQ H++
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDG-TQEQ----RLVPVQVMGLSGVVAVAAGSGQ-HSV 362
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETP----CLV-RGEIEGERIVKLSSAVDCVLAV 193
+ +G+V++ G +GQ G G + P LV R + R L+S D
Sbjct: 363 AVMANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPD----- 417
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSACTMLNDEGLVY 252
G V+ WG++ GQ+ + + R+L +Q G++ +V VA+G + L +G V+
Sbjct: 418 ---GTVWAWGDNAKGQLGDG---TTAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVW 471
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+WG G LG G RS PT +P + V S+ AGP A+ G L
Sbjct: 472 AWGDNANGQLGNGSTTDRS-NPTQVPGL----------TGVVSIAAGPGHALAVKADGTL 520
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG N GQLG GT D+P P +V
Sbjct: 521 WTWGDNNTGQLGDGTTVDRPIPTQV 545
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 28/273 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGE 125
++++ +A GR HT+ + + + +G+N++GQ G G +Q++ + W NI+ +
Sbjct: 47 ASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVG-- 104
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G H+L + G V++ G GQ G G ++ P V G E +V++++
Sbjct: 105 ------AGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGE---VVRVAA 155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
LA+ G V+ WG++ G++ + +T R++ Q +G+ I +A+G +
Sbjct: 156 GFSHSLALKTDGTVWAWGSNGAGRLGDG---TTTQRLMPVQVQGLPTIKAIAAGNAHSLA 212
Query: 245 LNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L+ G V++WG GQ M P L+P + L AG
Sbjct: 213 LDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGL----------TNATGLSAGSNHSLV 262
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++WG N YGQLG GT + P +V+
Sbjct: 263 RQADGTTWVWGANTYGQLGDGTTTSRSAPQQVS 295
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 32/274 (11%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T ++ LA G H +V+ + +T+GNN+ GQ G G + + L G +
Sbjct: 798 TDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTR-----RLVPTQVPGLTG--V 850
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ G H+L L G V+ GWG + GQ G G + P +G ++ ++S
Sbjct: 851 VAVAAGYAHSLALKADGTVW--GWGENIYGQLGDGTTTQRVAPTQAQGLTV---VLSMAS 905
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSACTM 244
LA G ++ WG + +GQ+ + +T R+ + +S +V +++
Sbjct: 906 GTYHGLARKADGTLWAWGYNAHGQLG---IGTTTTRLAPTLVPSLSGVVSLSATHQHSLA 962
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V++WGY G LG G +R + PT PS S V+++ AG
Sbjct: 963 LKPDGTVWAWGYNSNGQLGDGTTTTRHV-PTQAPSL----------SSVKAVSAGFEYSL 1011
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ G ++ WG N GQLG GT + P +VA
Sbjct: 1012 AVKADGTVWSWGINDRGQLGSGTATPRATPTQVA 1045
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 30/270 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + G H++ + + +T+G N+FGQ G G G+ + L GE ++
Sbjct: 100 ISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTT-----TGRQAPVQVPGL-GE-VVR 152
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H+L L G V++ WG++G LG + T L+ +++G +K +A +
Sbjct: 153 VAAGFSHSLALKTDGTVWA--WGSNGAGRLG--DGTTTQRLMPVQVQGLPTIKAIAAGNA 208
Query: 190 -VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSACTMLND 247
LA+ G V+ WG++ GQ+ ++ R+L + G++ +++G + +
Sbjct: 209 HSLALDGTGRVWAWGSNSNGQLGDTTAGY---RMLPALVPGLTNATGLSAGSNHSLVRQA 265
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G + WG YG LG G SRS Q + + V+ ++ +
Sbjct: 266 DGTTWVWGANTYGQLGDGTTTSRSAP-----------QQVSGLAGVDGVLGAELHSLVLK 314
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG NQ GQLG GT E + P++V
Sbjct: 315 SDGTVWTWGSNQRGQLGDGTQEQRLVPVQV 344
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 28/285 (9%)
Query: 55 SFVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+ V P+P + P T + +A G H++V+ + + +G+N GQ G G
Sbjct: 535 TTVDRPIPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRP---- 590
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G ++ G H+L L G V++ G+ GQ G G+ Q+ P V G
Sbjct: 591 -VPSQTPNLTG--VVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPG 647
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
G V L + + LA+ G V+ WG + GQ+ + T +Q G + +
Sbjct: 648 FSGG---VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRT--TPTQVAGFTGVS 702
Query: 234 DVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+A+G L +G ++WG G LG G PTL S L G
Sbjct: 703 FLAAGEFHSVALRTDGTAWAWGSNDKGQLGDG-SARWHYAPTL--SRLVG---------A 750
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
L AG A + G ++ WG N YGQLG GT P +V+
Sbjct: 751 RGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVS 795
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 28/277 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V S + A H++ + N +T+G+N GQ G G + H
Sbjct: 340 VPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPKR--SHA 397
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ + G+ H L G V++ G A GQ G G + P V G
Sbjct: 398 LVER-----TSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPGLTN-- 450
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+V +++ LA+ G V+ WG++ GQ+ S S P +Q G++ +V +A+
Sbjct: 451 -MVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNP---TQVPGLTGVVSIAA 506
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G + +G +++WG G LG G V R + PT +P + V S+
Sbjct: 507 GPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPI-PTQVPGV----------TGVVSVA 555
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
AG + G ++ WG N GQLG GT +P P
Sbjct: 556 AGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVP 592
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 32/279 (11%)
Query: 62 PVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P ++ +A G +H++ + + + +G+N G+ G G +
Sbjct: 141 PVQVPGLGEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMP--------V 192
Query: 121 DLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
++G + A+ G H+L L +G+V++ G ++GQ G + P LV G
Sbjct: 193 QVQGLPTIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTN--- 249
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
LS+ + L G + WG + YGQ+ + + S P+ +S GV ++
Sbjct: 250 ATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGVLGAE-- 307
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+L +G V++WG G LG G + R L+P + G S V ++ A
Sbjct: 308 -LHSLVLKSDGTVWTWGSNQRGQLGDGTQEQR-----LVPVQVMG------LSGVVAVAA 355
Query: 296 GPCTFG-AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
G A+ G ++ WG N GQLG G+ P +
Sbjct: 356 GSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPKR 394
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 27/279 (9%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
LP + P T + +A G ++ + + + +G+N+ GQ G G + + +
Sbjct: 441 LPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQ-----V 495
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G ++ G H L + G +++ G GQ G G ++ P V G + G
Sbjct: 496 PGLTG--VVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPG-VTG-- 550
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+V +++ + L V G V+ WG++ GQ+ I V SQ ++ +V + +G
Sbjct: 551 VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRP--VPSQTPNLTGVVAITAGL 608
Query: 240 SACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L +G V++WGY L LG G ++ + PT +P G SL AG
Sbjct: 609 YHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQV-PTQVPGFSGG----------VSLGAG 657
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AI G ++ WG N GQLG GT + P +VA
Sbjct: 658 IYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVA 696
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 218 STPRVLSQCKGV---SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP 271
S+P L+ K SR+ VA+G + +G V++WG YG LG G S++
Sbjct: 33 SSPDELATAKAAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNG-----SLQD 87
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+P +G + ++ AG A+ + G ++ WG N +GQLG GT + P
Sbjct: 88 QRVPVRAWGLW------NISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAP 141
Query: 332 LKV 334
++V
Sbjct: 142 VQV 144
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 91.3 bits (225), Expect = 6e-16, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 22/282 (7%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+SF R+ T + +A G AH++ + + +T+G N+ GQ G G + K
Sbjct: 85 VSFQRVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQK 144
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
++D ++ G+ H+L L G V++ G GQ G GH +P V G
Sbjct: 145 --VPGLSD-----VVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVG 197
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRI 232
+ G +V L++ D LAV G V+ WG + GQ+ + + +Q P +SQ +GVS
Sbjct: 198 -LTG--VVALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSA- 253
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
V +G L +G V++WG GQ + + +P+ + T + + S
Sbjct: 254 --VTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGS 311
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L+ + + G ++ WG N GQLG+GT D P P++V
Sbjct: 312 LV--------LLDDGGVFAWGLNSQGQLGIGTTADSPLPVRV 345
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 23/277 (8%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P PV+ S + K +A A ++V+ D+ G F +G NS GQ G G + +
Sbjct: 290 PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVR----- 344
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L + G H + L G +++ G GA GQ G G +P +V
Sbjct: 345 VRGLGA--VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSNVA 402
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVAS 237
+ S + V A+SD G V+ WG + GQ+ + +T R L + G+S +V V++
Sbjct: 403 SVA--SGSFHSVAALSD-GSVWTWGRNTNGQLGDG---TTTERHLPVRVPGLSGVVSVSA 456
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G L +G V WG+G QG + K P+ + G S V++L +G
Sbjct: 457 SGHHSFALRSDGTV--WGWGRNAQGQMGDGTTKDRASPARVEGL------SSVKALASGG 508
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N GQLG GT D+ P++V
Sbjct: 509 SHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQV 545
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 25/271 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G H++ +T + +G N GQ G G V + + + L
Sbjct: 47 ASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQ----RVVAQQVPGL--TD 100
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ G H+L L V++ G GQ G G ++ TP V G + +V +++
Sbjct: 101 VTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD---VVAVAAG 157
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+ G V+ WG++ YGQ+ Q +Q G++ +V +A+G +
Sbjct: 158 EFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSP--AQVVGLTGVVALAAGFDFSLAVR 215
Query: 247 DEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G V++W G G LG G + R + PT Q + V ++ AG A+
Sbjct: 216 SDGTVWAWGANGSGQLGDGTYIQR-LAPT----------QVSQLQGVSAVTAGLYHALAL 264
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G ++ WG N GQ+G GT D+P P++V
Sbjct: 265 RSDGTVWAWGSNSSGQMGDGTWTDRPSPVQV 295
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++G G N+ Q+G + + +P + + +K LA+G +H + + +
Sbjct: 470 VWGWGRNAQGQMGDGTTKDRASPARV------------EGLSSVKALASGGSHMVALRTD 517
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+T+G N GQ G G + + + L G + G +L L G V
Sbjct: 518 GTVWTWGYNGAGQLGDGTTTDRRAPVQ-----VTGLSG--VTSVAAGAYFSLALRTDGTV 570
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G G +GQ G G + +P V G R+VKL++ LAV D G V+ WG++
Sbjct: 571 WAWGDGFEGQLGDGAGVQRASPVQVTGLT---RVVKLAAGAAHGLAVRDDGTVWAWGDNT 627
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG- 262
GQ+ + V Q G++ + V G L +G + +WG YG G G
Sbjct: 628 EGQMGDGSWSDRFRAV--QVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGG 685
Query: 263 --PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
P+V P L S ++ L A A+ G L WG N++GQL
Sbjct: 686 VTPRVVAGAVPGL--------------SGIKLLGASYLHVLAVREDGMLLTWGYNRFGQL 731
Query: 321 GLGTVEDQPFPLKVAVGGQ 339
GLG P++V GQ
Sbjct: 732 GLGAAGWSSLPVQVRGLGQ 750
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 26/270 (9%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + + G H++ + + +G N++GQ G G V G + L G K+
Sbjct: 649 TGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGA-----VPGLSGIKL 703
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ A H L + E G + + G+ GQ GLG P VRG +G R LS+
Sbjct: 704 LGA--SYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGRR---LSAGR 758
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
L V G V WG + GQ+ + VL++ +R ++G +L
Sbjct: 759 AHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCARAA--SAGRQHSLVLAC 816
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V+SWG G LG G SR+ + L+G V +++AG + +
Sbjct: 817 DGTVWSWGGNSQGQLGDGGVTSRAYPAKV--EGLWG---------VVAVLAGGDSSMVLR 865
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N GQLG GT+ D+ PL+V
Sbjct: 866 ADGTVWTWGANGSGQLGDGTLGDRASPLEV 895
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 29/286 (10%)
Query: 55 SFVRIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
S R LPV+ + + +A G H++ + ++ + +G N FGQ G G + +
Sbjct: 1190 SNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTR 1249
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ L+G + G+ H+L L G +++ G + GQ G G N+ +P V
Sbjct: 1250 -----MLGLDGA--VAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQV-- 1300
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
+E +++ + + +A+ + G V+ WG++ GQ+ + ++T RV + G++ I
Sbjct: 1301 -VELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDG--TVTTRRVPAPVPGLTAIA 1357
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
V +G S + E ++WG +G LG G R ++PTL+ G H V
Sbjct: 1358 SVGAGTSHTFAVGSE--TWAWGRNSHGQLGTGDSSDR-LEPTLVK----GLH------GV 1404
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+S++AG A G WG N +G LG+G + P V +
Sbjct: 1405 KSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPGQRTVPGAVTL 1450
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 26/269 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK L H + + ++ T+G N FGQ G G + + L + +
Sbjct: 701 IKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQ-----VRGLGQGRRLS 755
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G+ H+L + G V + G GQ G G ++ +P L R + R
Sbjct: 756 A--GRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLAR-NLPCARAASAGRQHSL 812
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
VLA G V+ WG + GQ+ + +++ ++ +G+ +V V +GG + +L +G
Sbjct: 813 VLACD--GTVWSWGGNSQGQLGDG--GVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADG 868
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WG G LG G R+ P + G + + + + G ++
Sbjct: 869 TVWTWGANGSGQLGDGTLGDRAS-----PLEVKGL------AGIATGVMGEAHALVVSQD 917
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++ WG N GQLG GT P++VA
Sbjct: 918 GTVWAWGANGRGQLGDGTTTSSASPVRVA 946
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 42/308 (13%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N+D QLG + P+ + + + A HT+ + + +
Sbjct: 1129 GGNADGQLGDGTTESRATPITVAGLGAMVAV------------APAARHTLALRSDGTVW 1176
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G+N+FGQ G G + + EK+ G H+L + E G V++ G
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLP-------VQVVGLEKVTAIAAGSYHSLAVREDGTVWAWG 1229
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+ GQ G G ++ + P + G ++G V ++ L + G ++ GN+ +GQ+
Sbjct: 1230 YNVFGQLGDGTMDARAVPTRMLG-LDGA--VAVAGGEYHSLMLRFDGTLWATGNNSHGQL 1286
Query: 211 SESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVS 266
E T R+ Q + ++ V +GG L ++G V++WG+ G LG G +
Sbjct: 1287 GEGTF---TNRLSPFQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTT 1343
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
R + P +P + + S+ AG A+ + + WG+N +GQLG G
Sbjct: 1344 RRV-PAPVPGL----------TAIASVGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDSS 1390
Query: 327 DQPFPLKV 334
D+ P V
Sbjct: 1391 DRLEPTLV 1398
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC-VL 191
G H+L++T++G V++ G GQ G G ++ Q +V ++ G V +A D L
Sbjct: 56 GAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQR---VVAQQVPGLTDVTSIAAGDAHSL 112
Query: 192 AVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+ V+ WG + GQ+ + + + TP+ + G+S +V VA+G L +G
Sbjct: 113 ALRADRTVWTWGGNNAGQVGDGTNVDRPTPQ---KVPGLSDVVAVAAGEFHSLALRADGT 169
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V++WG YG LG+G +P P+ + G + V +L AG A+ + G
Sbjct: 170 VWAWGSNFYGQLGRG-----HSQPGPSPAQVVGL------TGVVALAAGFDFSLAVRSDG 218
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG N GQLG GT + P +V+
Sbjct: 219 TVWAWGANGSGQLGDGTYIQRLAPTQVS 246
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 29/267 (10%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G AH +V++ + + +G N GQ G G + +A L M+ GQ
Sbjct: 907 GEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVR-----VAGLSAA--MNVSVGQA 959
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
++L + G V+S G GQ G G + TP V+ + + +++ V+AV
Sbjct: 960 YSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLAD---VKAVTAGAHHVVAVRH 1016
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+GWG + +GQ+ + V + +G+ V+ ++G L + SWG
Sbjct: 1017 DGTVWGWGANAFGQVGDGTHFWRFRPV--RVEGLLNAVETSAGEQHSLALLGDERALSWG 1074
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV----ESLIAGPCTFGAITNFGH 308
YG LG + S++P + P SKV S+ A A+ G
Sbjct: 1075 SHEYGQLGDA-ESGPSLEPVGVKL---------PSSKVLVPAVSVSAWHQHAAALLADGT 1124
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ WG N GQLG GT E + P+ VA
Sbjct: 1125 VQTWGGNADGQLGDGTTESRATPITVA 1151
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 38/286 (13%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P PV+ + +K + G H + + + + +G N+FGQ G G W
Sbjct: 992 PKPVQDLA-DVKAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDG-------THFW---RF 1040
Query: 120 ADLEGEKIMDAV---CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ E +++AV G+ H+L L + S G GQ G P V+ +
Sbjct: 1041 RPVRVEGLLNAVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEPVGVK--LP 1098
Query: 177 GERI----VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSR 231
++ V +S+ A+ G V WG + GQ+ + + +TP ++ G+
Sbjct: 1099 SSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVA---GLGA 1155
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+V VA L +G V++WG +G LG G R++ P + G
Sbjct: 1156 MVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRRTL-----PVQVVGLE------ 1204
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
KV ++ AG A+ G ++ WG N +GQLG GT++ + P ++
Sbjct: 1205 KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRM 1250
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
W G G P R + K+++ L V+ G V+ WG + GQ+
Sbjct: 21 WLVMGCEGTSSPAEPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQL 80
Query: 211 SESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+S RV++ Q G++ + +A+G + L + V++WG G +G G V
Sbjct: 81 GTG--SVSFQRVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVD 138
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
R P +P S V ++ AG A+ G ++ WG N YGQLG G +
Sbjct: 139 RPT-PQKVPGL----------SDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQ 187
Query: 327 DQPFPLKV 334
P P +V
Sbjct: 188 PGPSPAQV 195
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI ++ + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G D + + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLG-----DTEERNTFHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSN---VCVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTE----DGRLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKL 327
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
+ G H I +T+N F+FG N GQ G G D + L + + C
Sbjct: 72 SNGCEHVIALTNNGKVFSFGFNVKGQLGHG-----DQTSINSPKQVEALSRKFVTAVGCS 126
Query: 134 QDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
HT+F + ++YSCG GQ GLG+L+++ +P L+ + G+RIV + +
Sbjct: 127 YYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEA-LNGKRIVSIGCGQYHSVV 185
Query: 193 VSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
S G++F +G ++ GQ I+ S+ IS P+ + K +A G +N+ G
Sbjct: 186 SSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKSTQ----IACGYYHTVAINN-GQ 240
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+YSWG G LG G ++ + PTL+ ++ S+ G A+ G
Sbjct: 241 LYSWGKNDSGQLGIGIYSAKEILPTLVRDL--------EDQEIVSVACGCYHTLALGYAG 292
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L+ +G+N +GQLG GT + PL +
Sbjct: 293 QLFSFGRNSHGQLGDGTTNNSCKPLLI 319
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 23/175 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I I CG +VV++ + +F G N QLG GN + +P
Sbjct: 172 RIVSIGCGQYHSVVSSIDGE----IFSFGRNDSGQLGI--TGSDGN--------ISLPKE 217
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
VK+ STQI A G HT+ I +N +++G N GQ G GI ++ + D
Sbjct: 218 VKNLKSTQI---ACGYYHTVAI-NNGQLYSWGKNDSGQLGIGIYSAKEILPTL----VRD 269
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
LE ++I+ CG HTL L +G+++S G + GQ G G NN P L++G I+
Sbjct: 270 LEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLID 324
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 49/278 (17%)
Query: 70 IKHLATGRAHTIVITD----NEGAFTFGNNSFGQCGRGIVQEEDYQGKWF--CHNIADLE 123
+ +A G HT+++TD G + NS Q + Q + + L
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62
Query: 124 GEKIMD--AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G+ I+ A G +H + LT +GKV+S G+ GQ G G + +P V
Sbjct: 63 GKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSR----- 117
Query: 182 KLSSAVDC-----VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
K +AV C + + +D+ +++ G ++YGQ+ + L + RIV +
Sbjct: 118 KFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIG 177
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQG-----------PKVSRSMKPTLIPSTLFGQHQFN 285
G + + +G ++S+G GQ PK +++K T I + H
Sbjct: 178 CGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKSTQIACGYY--HTV- 234
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
AI N G LY WGKN GQLG+G
Sbjct: 235 ----------------AINN-GQLYSWGKNDSGQLGIG 255
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T + C Y T+ + + ++++ CG N QLG + K +P L
Sbjct: 120 VTAVGCSYYHTIFSCADE---MEIYSCGRNDYGQLGLGNLDDKNSP----------TLIE 166
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA--- 120
+I + G+ H++V + + F+FG N GQ G + D NI+
Sbjct: 167 ALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLG---ITGSD-------GNISLPK 216
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGER 179
+++ K CG HT+ + +G++YS G GQ G+G + +E P LVR ++E +
Sbjct: 217 EVKNLKSTQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVR-DLEDQE 274
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
IV ++ LA+ G +F +G + +GQ+ + S +L Q ++ +A+G
Sbjct: 275 IVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG 333
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 35/261 (13%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV- 82
N K+F G N QLG+ D +P + V + R + + HTI
Sbjct: 84 NGKVFSFGFNVKGQLGHGDQTSINSPKQ-VEALSR---------KFVTAVGCSYYHTIFS 133
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
D ++ G N +GQ G G + +++ I L G++I+ CGQ H++ +
Sbjct: 134 CADEMEIYSCGRNDYGQLGLGNLDDKNSPTL-----IEALNGKRIVSIGCGQYHSVVSSI 188
Query: 143 SGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+++S G GQ G+ G N P E++ + +++ +A+++ G ++
Sbjct: 189 DGEIFSFGRNDSGQLGITGSDGNISLP----KEVKNLKSTQIACGYYHTVAINN-GQLYS 243
Query: 202 WGNSEYGQI-----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
WG ++ GQ+ S E+ + R L IV VA G L G ++S+G
Sbjct: 244 WGKNDSGQLGIGIYSAKEILPTLVRDLED----QEIVSVACGCYHTLALGYAGQLFSFGR 299
Query: 256 --YGLLGQGPKVSRSMKPTLI 274
+G LG G + S KP LI
Sbjct: 300 NSHGQLGDGT-TNNSCKPLLI 319
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 43/187 (22%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--------ISESEMQISTP----RVLSQCK 227
++++++ + L ++D GDV+ G +E G +S++ +T +++ + +
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62
Query: 228 GVSRIVDVASGGSACTM-LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
G + + AS G + L + G V+S+G+ G LG G + S
Sbjct: 63 GKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS----------------- 105
Query: 284 FNPKSKVESL-----IAGPC----TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
N +VE+L A C T + + +Y G+N YGQLGLG ++D+ P +
Sbjct: 106 INSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLI 165
Query: 335 -AVGGQK 340
A+ G++
Sbjct: 166 EALNGKR 172
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 42/333 (12%)
Query: 15 VVATKSKDKNLKLFG---CGLNSDSQL---GYHDPRKKGNPLELVMSFVRIPLPVKHPST 68
VA D +L + G L SD + GY+ R+ G+ + + P+ V T
Sbjct: 356 AVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRT---TPVQVSE-LT 411
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIADLEGEK 126
L G H +V+ + + +G+NS GQ G G+ V+ + Q ++ L
Sbjct: 412 GGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQ-------VSGLA--A 462
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G H++ + G +++ G GQ G+G +E P G I L++
Sbjct: 463 ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLAS---ISALAAG 519
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA+ G V+ WG++ YGQ+ + + + +T +Q G++ I +A+G L
Sbjct: 520 DSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATA---AQVPGLTDITALAAGNHHSLAL 576
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
++G V+ WG +G LG G SR Q + S + ++ AGP A
Sbjct: 577 RNDGTVWVWGSNDFGQLGDGTVTSRKTP-----------VQVSGLSAMRAVEAGPAHSVA 625
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G +++WG N +GQLG GTV + P++V+
Sbjct: 626 VHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVS 658
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 40/336 (11%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ IT +A G G +V + + ++ G N QLG + + IP
Sbjct: 460 LAAITALATGDGHSV----AVGSDGGIWAWGDNRRGQLGIG-----------ITATREIP 504
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ ++ I LA G +H++ + N +T+G+N++GQ G G + A
Sbjct: 505 VQATGLAS-ISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDR--------ATAA 555
Query: 121 DLEG-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G I G H+L L G V+ G GQ G G + +++TP V G + R
Sbjct: 556 QVPGLTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSG-LSAMR 614
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASG 238
V+ A +AV G V+ WGN+++GQ+ + + T R + Q G++ + VA G
Sbjct: 615 AVEAGPAHS--VAVHLNGTVWVWGNNDFGQLGDGTV---TSRAMPVQVSGLTGVTAVAVG 669
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L ++G +++WGY +GQ + ++ T P+ + G + V +L AG
Sbjct: 670 VYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQST--PAQVPG------LTGVIALAAGNG 721
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N +GQLG GT + P +V
Sbjct: 722 HSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQV 757
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ ++ + G AH++ + N + +GNN FGQ G G V ++ L G +
Sbjct: 611 SAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRA-----MPVQVSGLTG--V 663
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
G H+L L G +++ G+ GQ G G Q TP V G + G ++ L++
Sbjct: 664 TAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPG-LTG--VIALAAGN 720
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSACTMLN 246
LA+ G V+GWG + +GQ+ + +TPR +Q G++ ++ + +G L
Sbjct: 721 GHSLALRTDGTVWGWGANSFGQLGDG---TTTPRSTPTQVPGLTNVIALNAGAFYTVALR 777
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
E V+ WG GQ + + K T + Q + + V +L AG A+
Sbjct: 778 SERSVWEWGSKSAGQLGDGTVTQKTTPV--------QVSGLTDVTALAAGNAHALALRTD 829
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG NQ GQ+G GT P P+ V+
Sbjct: 830 RTVWAWGGNQRGQIGDGTASIMPAPVNVS 858
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 144/343 (41%), Gaps = 37/343 (10%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLK----LFGCGLNSDSQLGYHDPRKKGNPLELVMSF 56
+ +T +A G T VA + L+ ++ G NS QLG ++ P++ V+
Sbjct: 243 LAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQ-VLGL 301
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKW 114
T + LA G H++ + D+ + +GNNS GQ G G + Q
Sbjct: 302 -----------TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPG 350
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
IA G DH+L L G V++ G+ Q G G + TP V
Sbjct: 351 LTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSEL 410
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
G +V + + V+ SD G V+ WG++ GQ+ E + + Q G++ I
Sbjct: 411 TGGTALV--AGDLHAVVLKSD-GTVWAWGDNSSGQLGEGVTPVRAKPM--QVSGLAAITA 465
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G + +G +++WG G LG G +R IP Q + +
Sbjct: 466 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATRE-----IPV------QATGLASIS 514
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+L AG A+ G ++ WG N YGQLG GT D+ +V
Sbjct: 515 ALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQV 557
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 45/328 (13%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
++ ++ G N QLG + P V++P T + +A AH++
Sbjct: 161 RDGTVWAWGFNGSGQLGNGTATDRATP-------VQVP-----GLTSVMAVAASEAHSLA 208
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA------VCGQDH 136
+ + + +G+N +GQ G G + + + L G + A V H
Sbjct: 209 LRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQ-----VLGLAGVTALAAGGNGTTVAISAH 263
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+L L G V++ G + GQ G G + TP V G + L++ LA+ D
Sbjct: 264 SLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTS---VTALAAGAFHSLALRDD 320
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM---------LND 247
G V+ WGN+ GQ+ + V Q G++ ++ VA+GG ++ L
Sbjct: 321 GTVWAWGNNSSGQLGDGTTTARPTPV--QVPGLTSVIAVAAGGGDDSLGMRGDHSLALKS 378
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+G V++WGY L SR + P+T Q + + +L+AG + + G
Sbjct: 379 DGTVWAWGYNL-------SRQFGDGM-PATRTTPVQVSELTGGTALVAGDLHAVVLKSDG 430
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG N GQLG G + P++V+
Sbjct: 431 TVWAWGDNSSGQLGEGVTPVRAKPMQVS 458
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
DHTL L G V++ G+ GQ G G ++ TP V G ++ ++++ LA+
Sbjct: 154 DHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTS---VMAVAASEAHSLALR 210
Query: 195 DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------L 245
G V+ WG++ YGQ+ + ++ Q +TP Q G++ + +A+GG+ T+ L
Sbjct: 211 SDGTVWAWGDNGYGQLGDGTKAQRTTP---VQVLGLAGVTALAAGGNGTTVAISAHSLAL 267
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G V++WG G LG G R+ P + G + V +L AG A
Sbjct: 268 RSDGTVWAWGDNSAGQLGDGTTTERAT-----PVQVLG------LTSVTALAAGAFHSLA 316
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G ++ WG N GQLG GT +P P++V
Sbjct: 317 LRDDGTVWAWGNNSSGQLGDGTTTARPTPVQV 348
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 30/273 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T I LA G H++ + ++ + +G+N FGQ G G V + G
Sbjct: 561 TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP--------VQVSGLSA 612
Query: 128 MDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
M AV G H++ + +G V+ G GQ G G + ++ P V G + G + ++
Sbjct: 613 MRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG-LTG--VTAVAVG 669
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTML 245
V LA+ + G ++ WG + GQ+ I STP +Q G++ ++ +A+G L
Sbjct: 670 VYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTP---AQVPGLTGVIALAAGNGHSLAL 726
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G V+ WG +G LG G RS PT +P + V +L AG A
Sbjct: 727 RTDGTVWGWGANSFGQLGDGTTTPRS-TPTQVPG----------LTNVIALNAGAFYTVA 775
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + ++ WG GQLG GTV + P++V+
Sbjct: 776 LRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVS 808
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 27/269 (10%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHT 137
HT+ + + + +G N GQ G G + + G +M + H+
Sbjct: 155 HTLALRRDGTVWAWGFNGSGQLGNGTATDR--------ATPVQVPGLTSVMAVAASEAHS 206
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV------L 191
L L G V++ G GQ G G + TP V G + G + V L
Sbjct: 207 LALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLG-LAGVTALAAGGNGTTVAISAHSL 265
Query: 192 AVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+ G V+ WG++ GQ+ + + + +TP Q G++ + +A+G L D+G
Sbjct: 266 ALRSDGTVWAWGDNSAGQLGDGTTTERATP---VQVLGLTSVTALAAGAFHSLALRDDGT 322
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-IAGPCTFGAITNF 306
V++WG G LG G +R P +P L +SL + G + A+ +
Sbjct: 323 VWAWGNNSSGQLGDGTTTARP-TPVQVPG-LTSVIAVAAGGGDDSLGMRGDHSL-ALKSD 379
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++ WG N Q G G + P++V+
Sbjct: 380 GTVWAWGYNLSRQFGDGMPATRTTPVQVS 408
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
+S+A D LA+ G V+ WG + GQ+ + +TP Q G++ ++ VA+ +
Sbjct: 148 AVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATP---VQVPGLTSVMAVAASEA 204
Query: 241 ACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V++W GYG LG G K R+ ++ L G ++
Sbjct: 205 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVL--GLAGVTALAAGGNGTTVAISA 262
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ A+ + G ++ WG N GQLG GT ++ P++V
Sbjct: 263 HSL-ALRSDGTVWAWGDNSAGQLGDGTTTERATPVQV 298
>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
Length = 1914
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 35/300 (11%)
Query: 53 VMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
M+ I LP K +I+ +A G H +V+ +T+G S GQ G G D G
Sbjct: 629 AMTLTPIELPAK---IKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHG-----DLLG 680
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+ + L+G+ I+ A CG ++F++++G V +CG G++G G G + P L+
Sbjct: 681 RSKPEMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIE 740
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG---------QISESEMQISTPRVL 223
+ + + +S V+AV G+VF WG ++G S E+QIS P +
Sbjct: 741 PLLSVD-VRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFI 799
Query: 224 SQCK-GVSRIVDVASGGSACTMLNDE----GLVYSWGY----GLLGQGPKVSRSMKPTLI 274
+ K GV + + GS N+E GL + G+ L Q +V PT++
Sbjct: 800 REVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVV 859
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ H + + GP + G +Y +G+N GQLG G + + P++V
Sbjct: 860 RA--LTNH------RAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEV 911
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVAS 237
+I +++ ++ ++ V+ + V+ WG GQ+ ++ S P ++ KG S IV
Sbjct: 642 KIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKS-IVRACC 700
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G ++D G+V + G G LG G +S S +P LI L V ++
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSAS-RPRLIEPLL--------SVDVRAIS 751
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
GP A+ + G ++ WG+ ++G LGLG ED P +V +
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQI 793
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + I+CG VVA S + ++F G LG D +P E V+I
Sbjct: 745 VDVRAISCG-PHHVVAVGS---DGEVFAWGRGKHGCLGLGDEEDHFSPQE-----VQISE 795
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-----------RGIVQEEDY 110
PV I+ + G T+ +TD GNN + G + ++Q+ +
Sbjct: 796 PVF-----IREVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEV 850
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
G+ + L + +D G HT L E GKVY+ G +GQ G GH ++ P
Sbjct: 851 PGRKVPTVVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPME 910
Query: 171 VRGEIEGERIVKLSSAVDCVLAV--SDKGDVFGWG 203
V+ ++ V + + D AV + + +F WG
Sbjct: 911 VKDLSISDKTVTMLACGDMFTAVGINSENALFFWG 945
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTIVI 83
KL+ CG ++ +LG D P IP ++ IK +A +G H + +
Sbjct: 3307 KLYACGEGTNGRLGLGDDSNVCEP-------KLIPFLSQY---MIKKVAVHSGGKHALAL 3356
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
T + F++G G+ G G D I L+ ++I D CG H+ +T S
Sbjct: 3357 TQDGKIFSWGEGEDGKLGHGNSVSLDKP-----RLIESLKSKRIRDIACGSGHSAAITSS 3411
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFG 201
G++Y+ G G G+ G G Q P LV+ + G+R+++++ S +A++ G V+
Sbjct: 3412 GELYTWGLGEYGRLGHGDTATQMKPKLVQSLV-GQRVIQVACGSRDAQTMALTADGSVYS 3470
Query: 202 WGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG+ ++G++ TP ++ + G+ +V + G L G V++WG Y
Sbjct: 3471 WGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTWGKGDYF 3529
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G KPTL+ L G+ KV + G A+T+ G +Y WG N +
Sbjct: 3530 RLGHGND-HHVRKPTLVEG-LRGK-------KVVHVAVGALHCLAVTDTGQVYAWGDNDH 3580
Query: 318 GQLGLGT 324
GQ G G+
Sbjct: 3581 GQQGNGS 3587
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 43/283 (15%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--IAD 121
+ P T I + G H + +T + +++GN G+ G G W+ +
Sbjct: 494 EKPVTMIASHSDG-THYLALTQDSSVYSWGNGDGGRLGHG-------DRVWYDEPKLVEA 545
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L + I CG ++ L+ +G++Y+ G G G+ G G+ +N P LV + G +V
Sbjct: 546 LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA-LNGHMVV 604
Query: 182 KLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASG 238
++ S L V+ G VF WG+ YG++ S TP+++ + ++ + V G
Sbjct: 605 YVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDIN-VAKVYCG 663
Query: 239 GSACTMLNDEGLVYSWGYG---LLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKS 288
G L G VY+WG G LG G PKV +KP
Sbjct: 664 GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKP----------------K 707
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQL--GLGTVEDQP 329
KV+ L G A+T +Y WG+N YGQ+ LGT+ +P
Sbjct: 708 KVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTIVPEP 750
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
+ G TLF+ ++ GK+Y+CG G +G+ GLG +N P L+ + ++K + S
Sbjct: 3292 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLI--PFLSQYMIKKVAVHSG 3349
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G +F WG E G++ + + + PR++ K RI D+A G +
Sbjct: 3350 GKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKS-KRIRDIACGSGHSAAI 3408
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTF 300
G +Y+WG YG LG G ++ MKP L+ S L GQ +V + G
Sbjct: 3409 TSSGELYTWGLGEYGRLGHGDTATQ-MKPKLVQS-LVGQ-------RVIQVACGSRDAQT 3459
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG +G+LG G
Sbjct: 3460 MALTADGSVYSWGDGDFGKLGRG 3482
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + T S + L+ GL +LG+ D + P +LV S V
Sbjct: 3394 RIRDIACGSGHSAAITSSGE----LYTWGLGEYGRLGHGDTATQMKP-KLVQSLV----- 3443
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
++ +A G A T+ +T + +++G+ FG+ GRG G C+
Sbjct: 3444 ----GQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG--------GSDGCYTPL 3491
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
I L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3492 LIDRLNGLGVVQIECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-L 3548
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G+++V ++ LAV+D G V+ WG++++GQ
Sbjct: 3549 RGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3582
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I +L
Sbjct: 4341 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKL-----IEEL 4395
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G +Q TP LV ++ +++
Sbjct: 4396 LGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA-LQDYKVID 4454
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ ++ V G
Sbjct: 4455 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VIKVECGS 4513
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G +Y+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4514 QFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4564
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A T+ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4565 SLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKK 4609
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 41/267 (15%)
Query: 85 DNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
D GA + +G+N GQ G ++ + C +++ L ++ G+ L +T
Sbjct: 4256 DGSGAIYGWGHNHRGQLGG--LEGAKVKLPVLCESLSALRPVQLTG---GEQTLLAVTAD 4310
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GKVY+ G+GA G+ G+G ++ P L+ + +++ S C LA+S +G V+
Sbjct: 4311 GKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHC-LALSSEGHVYS 4369
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG + G++ + + P+++ + G + IVD+A GG + G +Y+WG YG
Sbjct: 4370 WGEGDDGKLGHGNRLMYDRPKLIEELLG-TEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4428
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-----IAGPCTFG-----AITNFG 307
LG G + Q PK VE+L I C G +T+
Sbjct: 4429 RLGHGD----------------SEDQLTPK-LVEALQDYKVIDVACGSGDAQTLCVTDDD 4471
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ WG YG+LG G + P+K+
Sbjct: 4472 NVWSWGDGDYGKLGRGGSDGCKIPMKI 4498
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ VYS G G G+ G G + P LV ++ + I ++ +S
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSS 566
Query: 196 KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + + P +++ G +V VA SG S + G+V+
Sbjct: 567 NGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNG-HMVVYVACGSGDSQTLCVTASGIVF 625
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T +G +
Sbjct: 626 SWGDGNYGKLGRG-GCDGSKTPKIVDKLL--------DINVAKVYCGGQFSAALTAYGEV 676
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WGK + +LG G E +P + V
Sbjct: 677 YTWGKGEGYRLGHGNEEHIRYPKVIEV 703
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G ++ V++ N +T+G ++G+ G G + + L G ++
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHG-----NSDNVLIPTLVTALNGHMVVY 605
Query: 130 AVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG TL +T SG V+S G G G+ G G + +TP +V ++ + K+
Sbjct: 606 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIV-DKLLDINVAKVYCGG 664
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
A++ G+V+ WG E ++ +E I P+V+ K ++ ++ G L
Sbjct: 665 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKP-KKVKELCVGNFHVLALT 723
Query: 247 DEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQH 282
++ LVY WG GQ P + + +PTL P TL G++
Sbjct: 724 EDQLVYGWGRNDYGQIDPALGTIVPEPTLCP-TLSGKN 760
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + V E+ + + + ++ + VS +G ++ G G+
Sbjct: 3259 WGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGR 3318
Query: 210 ISE-SEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPK 264
+ + + P+++ + + + V V SGG L +G ++SWG G LG G
Sbjct: 3319 LGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNS 3378
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
VS KP LI S ++ + G AIT+ G LY WG +YG+LG G
Sbjct: 3379 VSLD-KPRLIESL--------KSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGD 3429
Query: 325 VEDQPFP-LKVAVGGQK 340
Q P L ++ GQ+
Sbjct: 3430 TATQMKPKLVQSLVGQR 3446
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
D L+ G ++GWG++ GQ+ E ++ P VL + R V + G +
Sbjct: 4250 DWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLLAVT 4308
Query: 247 DEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G VY+ GYG LG G S M PTL+ S QH F K V S G A+
Sbjct: 4309 ADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESI---QHVFVKKVAVNS---GGKHCLAL 4361
Query: 304 TNFGHLYMWGKNQYGQLGLGT--VEDQPFPLKVAVGGQ 339
++ GH+Y WG+ G+LG G + D+P ++ +G +
Sbjct: 4362 SSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTE 4399
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT IACG ++ V + N +L+ G + +LG+ GN +++ + L
Sbjct: 551 ITFIACGSTYSAVLSS----NGELYTWGRGNYGRLGH------GNSDNVLIPTLVTALN- 599
Query: 64 KHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++A +G + T+ +T + F++G+ ++G+ GRG + + + D
Sbjct: 600 ---GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC--DGSKTPKIVDKLLD 654
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ K+ CG + LT G+VY+ G G + G G+ + P ++ ++ +++
Sbjct: 655 INVAKVY---CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIE-VLKPKKVK 710
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+L VLA+++ V+GWG ++YGQI
Sbjct: 711 ELCVGNFHVLALTEDQLVYGWGRNDYGQI 739
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D +IP+
Sbjct: 4451 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKIPMK 4497
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4498 IESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4552
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + T+ G+V++ G +GQ G G + + P LV ++G++I
Sbjct: 4553 LQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA-LQGKKIT 4611
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4612 RVACGSAHTLAWS 4624
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 237 SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
S G+ L + VYSWG G LG G +V +P L+ + + K +
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYD-EPKLVEALV---------DKNITF 553
Query: 294 IAGPCTFGAI-TNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQ 339
IA T+ A+ ++ G LY WG+ YG+LG G ++ P L A+ G
Sbjct: 554 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGH 601
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E++ + LE + V G ++L + + GK+++
Sbjct: 8 IAWGSGEDGQLGLGTDEEKE-----LASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTW 62
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + TP LV+ + +IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPPETKTESTPSLVK-SLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQISESEMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
YGQ E + T R + +C + VA+GG+ +L EG V++WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
P +K IP + G V + G A+ G L+ WG N+YGQ
Sbjct: 177 ---PWPPGDIKQISIPVRVQGLE------NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227
Query: 320 LGLGTVEDQPFPLKV 334
LG G + + FP+ V
Sbjct: 228 LGTGDTQPRSFPIPV 242
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 28/317 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G N LG+ K + LV S S +I A G H + + D
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLA---------SVKIVQAAIGGWHCLAVDD 108
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG----EKIMDAVCGQDHTLFLT 141
A+ +G N +GQCG +D G+ +I + + G H++ LT
Sbjct: 109 QGRAYAWGGNEYGQCGE--EPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLT 166
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V++ WG G + P V+G +E R++ + + + LA+ + G ++
Sbjct: 167 REGYVWT--WGQPWPPG--DIKQISIPVRVQG-LENVRLIAVGAFHN--LALKEDGTLWA 219
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
WGN+EYGQ+ + Q + + Q +VD+A+GG T L +EG VY WG G G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + + + G A+T G ++ +G+ +G+LG
Sbjct: 280 LGFGDNDKSSKMLPQKV----NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Query: 322 LG--TVEDQPFPLKVAV 336
G QP L + +
Sbjct: 336 YGRKVTTGQPLELPIDI 352
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 23/249 (9%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+G++ GQ G G + ++ + C +G + + CG H+LFL G VY+CG
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCC----VFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-- 209
+ GQ LGH P LV G ++ ++I +S LAV+++G VF WG + GQ
Sbjct: 61 NSCGQ--LGHDKGGSRPELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLG 117
Query: 210 ISESEMQISTPRVLSQ-CKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ +E + PR++ + C+ RI V G C L+ +G ++ WG G LG G
Sbjct: 118 LGTAEEAVRVPRLIKKLCE--HRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGE 175
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
++ P + S L G P +++ + G +F A++ G ++ WGKN GQLGL
Sbjct: 176 PSTLSPQPLKS-LCGI----PLTQISA--GGDHSF-ALSFSGAVFGWGKNSAGQLGLNDE 227
Query: 326 EDQPFPLKV 334
+D+ P +
Sbjct: 228 QDRAVPCHI 236
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 24/271 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + + +T G+NS GQ G +G + L+ +KI
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHD-------KGGSRPELVGALDAQKISG 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CGQ H+L + E G+V++ G G GQ GLG P L++ E RI ++
Sbjct: 89 VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNH 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+S G +F WG + GQ+ + + ST P+ L G+ + +++GG L+
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIP-LTQISAGGDHSFALS 206
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G V+ WG G LG + R+ +P + +F KV + G A+
Sbjct: 207 FSGAVFGWGKNSAGQLGLNDEQDRA-----VPCHI----KFLRSQKVVYISCGEEHTAAL 257
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T G L+ +G GQLG + ++P P +V
Sbjct: 258 TKEGGLFTFGNGSKGQLGHDSTRNEPLPRRV 288
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 143/333 (42%), Gaps = 27/333 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG ++ ++ CG NS QLG HD K G+ ELV +
Sbjct: 36 LKEVACGNQHSLFLLHDGS----VYTCGSNSCGQLG-HD--KGGSRPELVGAL------- 81
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +I ++ G+AH++ + + F +G GQ G G +E + I L
Sbjct: 82 --DAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRL----IKKLC 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+I +CG H + L++ G+++ G + GQ GLG + G + ++
Sbjct: 136 EHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S+ D A+S G VFGWG + GQ+ ++ Q + ++V ++ G
Sbjct: 196 SAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTA 255
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TFGA 302
L EG ++++G G GQ S +P +P + ++V + G T
Sbjct: 256 ALTKEGGLFTFGNGSKGQLGHDSTRNEP--LPRRVMELM----GTEVSQIACGRNHTLAF 309
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + G +Y +G N GQLG G P+ V+
Sbjct: 310 VPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVS 342
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 32/257 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +G+ S GQ G G +++E Q W D E++ CG HTLFLT +GK
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTPSQIPW----TPDTAVEQV---ACGHRHTLFLTANGK 60
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+C G++ + LGH + P L+ E++ I+++S LA+SD G V WG++
Sbjct: 61 VYAC--GSNDHSQLGHDLPTKRPLLI-PELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 206 EYGQI---SESEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ GQ+ ++ E+ + P+V+ Q VS+ +V +A G + L G +YSWG + GQ
Sbjct: 118 DCGQLGHATDKEI-MQLPKVVRQL--VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 262 ----GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
PK L +TL G + ++ G I+ G ++ WG+N
Sbjct: 175 LGVNSPKDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 318 GQLGLGTVEDQPFPLKV 334
GQLGL ++ +P ++
Sbjct: 228 GQLGLNDETNRAYPTQL 244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T N + G+N Q G + + I +L+
Sbjct: 38 PDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLL-------IPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I+ CG H+L L++ G+V S WG + LGH ++E P +VR ++ + +V+
Sbjct: 91 VIIQISCGSRHSLALSDWGQVLS--WGDNDCGQLGHATDKEIMQLPKVVR-QLVSKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P+ L+ C R+
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPKDLTHCNYPLRLTTLLGIPLAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +R+ L G V
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 146/345 (42%), Gaps = 46/345 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG+ T+ T N K++ CG N SQLG+ P K+ P+
Sbjct: 42 VEQVACGHRHTLFLTA----NGKVYACGSNDHSQLGHDLPTKR---------------PL 82
Query: 64 KHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P Q I ++ G H++ ++D ++G+N GQ G D + +
Sbjct: 83 LIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT----DKEIMQLPKVVR 138
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC---LVRGEIEG 177
L + ++ CG +H+L LT G++YS G GQ G+ + T C L + G
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-THCNYPLRLTTLLG 197
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+ ++ + +S G VFGWG + GQ+ E + P L + + + VA
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVA 256
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G L +EG V++ G YG LG G S M P ++ L G S + +
Sbjct: 257 CGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS-SNEMLPRMV-MELMG-------STITQV 307
Query: 294 IAG-PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T + + G +Y +G GQLG + + P +V +G
Sbjct: 308 ACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVIG 351
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 60 PLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+PV+ + + +A GR H++ + + + +GNN +GQ G G + ED N
Sbjct: 238 PVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNG--KSEDSYDPVQVKN 295
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ--ETPCLVRGEIE 176
+ D ++ G++H+L L + G +++ G G L N E C+
Sbjct: 296 LKD-----VVAIAAGENHSLALKKDGTIWAWG-----DNEWGQLGNSISEKLCVPVQFKS 345
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
+ +V +++ + LA+ G V+ WGN+ YGQ+ S V Q +G+ +V +A
Sbjct: 346 LKDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPV--QVRGLKDVVAIA 403
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+G + L +G V++WG +G LG G + K + +P + G V ++
Sbjct: 404 TGNAHSLALKKDGTVWAWGNNEFGQLGNG-----TNKSSFVPVQVKGLKD------VVAI 452
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
AG A G ++ WG N++GQLG G+
Sbjct: 453 AAGSDHSLAFKKDGTVWAWGNNEFGQLGNGS 483
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V+ + +ATG AH++ + + + +GNN FGQ G G + F
Sbjct: 389 VPVQVRGLKDVVA-IATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSS------FVP- 440
Query: 119 IADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGL---GHLNNQETPCLVRGE 174
++G K + A+ G DH+L + G V++ G GQ G G+ P V+G
Sbjct: 441 -VQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGL 499
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
+ +V +++ LA+ G ++ WG++ +G + I V Q KG+ +V
Sbjct: 500 ---KDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGN---DIERSFVPVQVKGLKDVVA 553
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+G + +L +G V++WG + LL + ++ S P Q V
Sbjct: 554 IAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPV----------QIKGLKDVV 603
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++ AG + G ++ WG N +GQLG
Sbjct: 604 AIAAGEHHSLGLKKDGTVWAWGDNFFGQLG 633
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 120/267 (44%), Gaps = 25/267 (9%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ VK + +A G H++ + + +GNN FGQ G G G+++
Sbjct: 439 VPVQVKGLKDVVA-IAAGSDHSLAFKKDGTVWAWGNNEFGQLGNG----SGGYGQYYAVP 493
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEG 177
+ + ++ G H+L L + G +++ WG++ LG+ + P V+G
Sbjct: 494 VQVKGLKDVVAVAAGSVHSLALKKDGTIWA--WGSNYHGLLGNDIERSFVPVQVKGL--- 548
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +V +++ + L + G V+ WG + ++E+ + + V Q KG+ +V +A+
Sbjct: 549 KDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSS-VPVQIKGLKDVVAIAA 607
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G L +G V++WG +G LG P+ S+ P Q + ++
Sbjct: 608 GEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPV----------QVKGLKDILAIA 657
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI G ++ WG+N GQLG
Sbjct: 658 TGEWHSLAIKKDGTVWAWGENSTGQLG 684
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 122 LEGEKIMDAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+EG K + A+ G+ H+L L + G V++ G GQ G G + P V+ + +
Sbjct: 243 VEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNL---KDV 299
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGG 239
V +++ + LA+ G ++ WG++E+GQ+ S ++ P Q K + +V +A+G
Sbjct: 300 VAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVP---VQFKSLKDVVAIAAGC 356
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L +G V+SWG YG LG G + + +P + G V ++ G
Sbjct: 357 EHSLALKKDGTVWSWGNNYYGQLGNGNSID-----SYVPVQVRGLKD------VVAIATG 405
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N++GQLG GT + P++V
Sbjct: 406 NAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQV 443
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 33/314 (10%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ ++ G N D QLG D + + +P+ VK + +A G +++
Sbjct: 111 KDGTVWAWGSNKDGQLGNRDAGE----------YSIVPVQVKGLKDVVA-IAAGDGYSLG 159
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ + + +G N Q G +D+ + + D ++ G+D++L L +
Sbjct: 160 LKKDGTVWCWGLNESIQVIDG--SNKDFSVPFQIKGLKD-----VVAIAAGKDYSLALKK 212
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER-IVKLSSAVDCVLAVSDKGDVFG 201
G V+ + + L ++ +P V ++EG + +V +++ LA+ G V+
Sbjct: 213 DGTVWMWEYKYNYYEQLRRGADEYSPVPV--QVEGLKDVVAIAAGRYHSLALKKDGTVWA 270
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
WGN+ YGQ+ + + S V Q K + +V +A+G + L +G +++WG GQ
Sbjct: 271 WGNNYYGQLGNGKSEDSYDPV--QVKNLKDVVAIAAGENHSLALKKDGTIWAWGDNEWGQ 328
Query: 262 -GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G +S + +P QF V ++ AG A+ G ++ WG N YGQL
Sbjct: 329 LGNSISEKL---CVPV------QFKSLKDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQL 379
Query: 321 GLGTVEDQPFPLKV 334
G G D P++V
Sbjct: 380 GNGNSIDSYVPVQV 393
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 37/276 (13%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
I +A G H++ + + + +G N +GQCG EE +I ++ + +
Sbjct: 46 NNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGT----EES--------SIIPVKVKGL 93
Query: 128 MDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIEGERIV 181
D V G+ H+L L + G V++ G DGQ LG+ + E P V+G + +V
Sbjct: 94 KDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQ--LGNRDAGEYSIVPVQVKGL---KDVV 148
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
+++ L + G V+ WG +E Q+ + S S P Q KG+ +V +A+G
Sbjct: 149 AIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPF---QIKGLKDVVAIAAGKD 205
Query: 241 ACTMLNDEGLVYSW--GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L +G V+ W Y Q + + P + Q V ++ AG
Sbjct: 206 YSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPV--------QVEGLKDVVAIAAGRY 257
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG N YGQLG G ED P++V
Sbjct: 258 HSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQV 293
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 FVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+ +P+ VK + +A G H++ + + + +G+N G G I + F
Sbjct: 489 YYAVPVQVKGLKDVVA-VAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIERS-------F 540
Query: 116 CHNIADLEGEKIMDAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
++G K + A+ G +H+L L + G V++ G + L + N++ V +
Sbjct: 541 VP--VQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWG---EVWFDLLNENSRLVYSSVPVQ 595
Query: 175 IEGER-IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
I+G + +V +++ L + G V+ WG++ +GQ+ S + V Q KG+ I+
Sbjct: 596 IKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPRE-KYSLVPVQVKGLKDIL 654
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+A+G + +G V++WG GQ G + S K + +P + G V +
Sbjct: 655 AIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKD------VLA 708
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ AG A+ G ++ WG N GQLG G
Sbjct: 709 ISAGSYHSLALKKDGTVWGWGANARGQLGNG 739
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ ++ G N QLG + PR+K + +P+ VK I +ATG H++
Sbjct: 617 KDGTVWAWGDNFFGQLG-NSPREK---------YSLVPVQVKGLK-DILAIATGEWHSLA 665
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLT 141
I + + +G NS GQ G ++ Y + ++G K + A+ G H+L L
Sbjct: 666 IKKDGTVWAWGENSTGQLGNETSGKDKY-----SYVPVQVKGIKDVLAISAGSYHSLALK 720
Query: 142 ESGKVYSCGWGADGQTGLGH 161
+ G V+ GWGA+ + LG+
Sbjct: 721 KDGTVW--GWGANARGQLGN 738
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 25/275 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ ++ G H++V T + G +FG S G + D + + + L G +I+
Sbjct: 110 RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIV 169
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G H+L L++ G V+S G G DG G G Q P L+ ++ E++V +++
Sbjct: 170 KVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLI-SSLQREKVVDIAAGSA 228
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSR-IVDVASGGSACTMLN 246
L V++ GDV+ +G G + + +S P+ + V R V VA+GGS +L+
Sbjct: 229 HSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHF--VQRPAVKVAAGGSHSLVLS 286
Query: 247 ------DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
EG V S+G YG LG G P Q ++ + AG
Sbjct: 287 KLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPA----------QVQVEAAAVEIEAGA 336
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFP 331
+TN G +Y +G Q+GQLG G + D P P
Sbjct: 337 HHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEP 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 34/284 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I +A G ++V S N+ FG G+ D LG+ D ++ P +L+ S R
Sbjct: 166 VRIVKVAAGAHHSLVL--SDQGNVFSFGVGI--DGSLGHGDQARQLVP-KLISSLQR--- 217
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G AH++V+ ++ ++FG S G G G D I
Sbjct: 218 ------EKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-----DTDMSLVPKKIEH 266
Query: 122 LEGEKIMDAVCGQDHTLFLT------ESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGE 174
+ G H+L L+ + G+V S G + GQ GLGH + +P V+ E
Sbjct: 267 FVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVE 326
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIV 233
V++ + L +++ G V+ +G +++GQ+ ++++ + L Q RIV
Sbjct: 327 AAA---VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIV 383
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
DVA+G + +L+ EG V+S+G G LG+G + S + +PT++
Sbjct: 384 DVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDE-SNATQPTVV 426
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGA-----DGQTGLGHLN 163
D+ K + L E++ D G H+L T+ G + S G+G+ DG+ G G
Sbjct: 93 DHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQR 152
Query: 164 NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRV 222
Q P V + G RIVK+++ L +SD+G+VF +G G + + + P++
Sbjct: 153 TQMIPRPVL-SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKL 211
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLF 279
+S + ++VD+A+G + ++ + G VYS+G G LG G +L+P +
Sbjct: 212 ISSLQ-REKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-----DTDMSLVPKKI- 264
Query: 280 GQHQFNPKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYGQLGLG 323
F + V+ G + + G + +G+N YGQLGLG
Sbjct: 265 --EHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLG 311
>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 775
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
+ ++ G N + QLG R++ +P+PV S+ + +A GR H++
Sbjct: 439 SDATVWAWGRNYEGQLGDGTTRRR-----------EVPVPVPKLSSVVA-VAAGRYHSLA 486
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ + + +G+N +GQ G G + + +L G + A G++H+L L
Sbjct: 487 VRFDGTVWAWGDNEYGQVGDGTETSRKAPVR-----VPNLGGGVAVAA--GENHSLVLRS 539
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V++ G GQ G G ++ P V+G G V +++ LAV G V+ W
Sbjct: 540 DGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGG---VAVAAGQYYSLAVRSDGTVWAW 596
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLL 259
G + GQ+ + S V Q G+S V VA+G S ++ +G V++WG G +
Sbjct: 597 GLNFEGQLGDGTASDSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQV 656
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G+G R + P Q S+ ++ AG A+ + G ++ WG N G
Sbjct: 657 GEGAPRRRVLMPV----------QVQGLSEGMAVAAGYNHSLAVRSDGSVWAWGGNTAGV 706
Query: 320 LGLGTVEDQPFPLK 333
LG GT + + P++
Sbjct: 707 LGDGTTDRRTVPVQ 720
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 43/299 (14%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
+ + + +P+ V S + +A +H + + + + +G N +GQ G G E
Sbjct: 356 DTIETMSTVPVQVPGLSGGVTVVAA-SSHALAVRSDGTVWAWGGNHYGQLGDGTTSE--- 411
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
+ + L G +M Q+H+L + V++ G +GQ G G +E P
Sbjct: 412 --RLVAVPVQGLSG--VMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVPVP 467
Query: 171 VRGEIEGERIVKLSSAVDCV------LAVSDKGDVFGWGNSEYGQISE-SEMQISTP-RV 222
V KLSS V LAV G V+ WG++EYGQ+ + +E P RV
Sbjct: 468 VP---------KLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRV 518
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLF 279
+ GV+ VA+G + +L +G V++WG YG LG G S S P
Sbjct: 519 PNLGGGVA----VAAGENHSLVLRSDGTVWAWGGNHYGQLGNG-ITSDSPVPV------- 566
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
Q S ++ AG A+ + G ++ WG N GQLG GT D P P++V V G
Sbjct: 567 ---QVQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPG 622
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P PV S + +A G H++ + + + +G+N GQ G G +
Sbjct: 162 VPAPVPGLSGGVA-VAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNVSLVPVR----- 215
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G ++ G+ H+L + G V++ G+ G G G ++++ P V+G G
Sbjct: 216 VKKLTG--VVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVPVQVQGLSGG- 272
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP--RVL--SQCKGVSRIVD 234
V ++ V LAV G V+GWG + GQ+ + TP RVL Q +G+S +
Sbjct: 273 --VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGD-----GTPMRRVLVPVQAQGLSGVEA 325
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA+G S + +G V++WG YG LG + S P +P G
Sbjct: 326 VAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSGG----------V 375
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++A A+ + G ++ WG N YGQLG GT ++ + V
Sbjct: 376 TVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLVAVPV 418
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 119/310 (38%), Gaps = 61/310 (19%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE----DYQG-------------- 112
+ATG H+ + + + G N FGQ G G E QG
Sbjct: 74 ARIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQGLSGVVAVAVGAYHS 133
Query: 113 --------KWFCHNIADLEGEKI----------------MDAVCGQDHTLFLTESGKVYS 148
W A G+ + G H+L L G V++
Sbjct: 134 LALRSDGTVWAVGRAACQGGDGTASDCTVPAPVPGLSGGVAVAAGGLHSLALRSDGTVWA 193
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G +GQ G G N P V+ ++ G +V +++ LAV G V+ WG + YG
Sbjct: 194 WGSNFEGQLGDGTTNVSLVPVRVK-KLTG--VVAVAAGEKHSLAVRSDGTVWTWGFNGYG 250
Query: 209 QISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW---GYGLLGQGPKV 265
+ + S+ +V Q +G+S V VA G + +G V+ W G G LG G +
Sbjct: 251 ALGDGT--TSSRKVPVQVQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPM 308
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
R + P Q S VE++ AG A+ G ++ WG N YG LG T+
Sbjct: 309 RRVLVPV----------QAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTI 358
Query: 326 ED-QPFPLKV 334
E P++V
Sbjct: 359 ETMSTVPVQV 368
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V+ S + +A G+ +++ + + + +G N GQ G G +
Sbjct: 564 VPVQVQGLSGGVA-VAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVP---VRVQ 619
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEG 177
+ L G + A G H L + G V++ G DGQ G G + P V+G EG
Sbjct: 620 VPGLSGGVAVAA--GTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG 677
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +++ + LAV G V+ WG + G + + T V Q +G++ VA+
Sbjct: 678 ---MAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRT--VPVQAQGLTGARAVAA 732
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ 261
G S +L +G ++ G GQ
Sbjct: 733 GESHSLVLRSDGTGWAMGSNASGQ 756
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 33/285 (11%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQG 112
+ V P P++ ++ +A G HT +ITD+ +TFG+ G+CGR G EED
Sbjct: 1234 VRMVSFPPPLR----RVVQIACGYRHTALITDDRHLYTFGH---GECGRLGHGTEEDCTD 1286
Query: 113 K----WFCHNIAD--LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE 166
+F IA +E ++D CG++HT+ +T +G +Y GWG G+ G G +
Sbjct: 1287 PIPVGYFTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSL 1346
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQ 225
P ++ I ++ + LA++ KG VF +G G++ SE P ++
Sbjct: 1347 YP----SRVDLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEG 1402
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLI------PS 276
+ S IV +A+G L+ +G V +WG+ G LG G + + PTL+ P+
Sbjct: 1403 LEEYS-IVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTR-DNCLIPTLVDGPWTNPN 1460
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
H S V S+ G A TN G LY WG GQLG
Sbjct: 1461 VETLIHDI---SVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLG 1502
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 142/339 (41%), Gaps = 33/339 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRI 59
++ IACGY T + T D++L FG CG +LG+ +P+ V F +
Sbjct: 1245 RVVQIACGYRHTALITD--DRHLYTFGHGECG-----RLGHGTEEDCTDPIP-VGYFTSL 1296
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ ++ GR HT+V+T N + FG G+ G G Y + NI
Sbjct: 1297 IAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLRNI 1356
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
A + CG++HTL LT G+V++ G G G+ G G ++E P LV G +E
Sbjct: 1357 AAV--------ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEG-LEEYS 1407
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQIST--------PRVLSQCKG 228
IV +++ A+S G+V WG G + + I T P V +
Sbjct: 1408 IVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHD 1467
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+S + VA G ++G++Y WG GQ S + ++ S + + S
Sbjct: 1468 ISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSP--KEIRLPTSS 1525
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
+ + G T + G L+MWG G VED
Sbjct: 1526 GIRGIACGTFTSAVCSTQGQLFMWGSPAAGNGAPLDVED 1564
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-------LVRGE-IE 176
+++ CG HT +T+ +Y+ G G G+ G G + P L+ E +E
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVE 1303
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVD 234
+V +S + + V+ GD++G+G E G++ E + RV + I
Sbjct: 1304 FGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRV-----DLRNIAA 1358
Query: 235 VASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G L +G V+++G G LG G + + P + G +++ +
Sbjct: 1359 VACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEEL-----PFLVEGLEEYS----IV 1409
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ AG C A++ G + WG G LG GT ++ P V
Sbjct: 1410 AIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLV 1452
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 22/260 (8%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
++IT ++ + G+N+ G G G D ++ + L G+ I G+ H L
Sbjct: 37 LIITRDKIVYALGSNTSGCLGTG-----DACNTFYPKKVEALCGKNIKTFAYGKGPHVLA 91
Query: 140 LTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LTE GKVYS WG + LG+ + N P V + E IV ++ LA++++G
Sbjct: 92 LTEEGKVYS--WGHNSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGK 149
Query: 199 VFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
V+ WG + GQ+ +S + +TP ++ ++ ++ G S+ + D G VY WG
Sbjct: 150 VYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGCN 209
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G V++ + P + + ++ ++ G A++N G LY+WG
Sbjct: 210 DVGQLGIGNYVNQ-VDPCEVTMLV--------DVVIKKIVCGYAHVLALSNKGALYVWGG 260
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
N YGQLGLG + P+++
Sbjct: 261 NNYGQLGLGMKMNMCNPVQL 280
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-----ADL 122
IK A G+ H + +T+ +++G+NS G+ G H I +L
Sbjct: 77 NIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTN----------HMIPMPVTKNL 126
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E I+D CG H+L LT GKVY+ G GQ G N+ TP V + G+ ++
Sbjct: 127 NDEFIVDIACGSHHSLALTNEGKVYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVIC 186
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+S + V+D G V+GWG ++ GQ+ + + C+ V+ +VDV C
Sbjct: 187 ISCGQSSSMTVTDTGKVYGWGCNDVGQLGIG----NYVNQVDPCE-VTMLVDVVIKKIVC 241
Query: 243 -----TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQ 281
L+++G +Y WG YG LG G K++ P + + G+
Sbjct: 242 GYAHVLALSNKGALYVWGGNNYGQLGLGMKMNMC-NPVQLKQEMMGR 287
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAV 193
+ L +T VY+ G G G G N P V + G+ I + VLA+
Sbjct: 34 NEALIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEA-LCGKNIKTFAYGKGPHVLAL 92
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+++G V+ WG++ +G++ P +++ IVD+A G L +EG VY+
Sbjct: 93 TEEGKVYSWGHNSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYA 152
Query: 254 WGYGLLGQ-GPKVS-RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
WG GQ G V+ P + STL G+ V + G + +T+ G +Y
Sbjct: 153 WGENTCGQVGKSVNINENTPMKVNSTLAGK-------TVICISCGQSSSMTVTDTGKVYG 205
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVAV 336
WG N GQLG+G +Q P +V +
Sbjct: 206 WGCNDVGQLGIGNYVNQVDPCEVTM 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I DIACG ++ T K++ G N+ Q+G + P+++ +
Sbjct: 131 IVDIACGSHHSLALTNEG----KVYAWGENTCGQVGKSVNINENTPMKVNSTL------- 179
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ++ G++ ++ +TD + +G N GQ G G +Y + + L
Sbjct: 180 --AGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIG-----NYVNQVDPCEVTMLV 232
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
I VCG H L L+ G +Y G GQ GLG N P ++ E+ G +
Sbjct: 233 DVVIKKIVCGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNMCNPVQLKQEMMGRVLDVA 292
Query: 184 SSAVDCV-LAVSDKGDVFGWG 203
+S + + +A+++ +F WG
Sbjct: 293 TSHYNHISIAMAEGNRIFMWG 313
>gi|328791212|ref|XP_391873.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 508
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 27/263 (10%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+++T ++ + G+N+ G G G D + + +L G+ I G+ H L
Sbjct: 13 LIVTKDKMVYAIGSNTSGCLGTG-----DTYNTLYPRRVEELCGKDIKTFAYGKGPHVLA 67
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
LTE GKVYS WG + LG+++ + P LV + E I+ ++ LA++ +G
Sbjct: 68 LTEDGKVYS--WGHNSHCELGNISASQGLIPMLVTKNLCNEFIIDIACGSHHSLALTIEG 125
Query: 198 DVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+ WG + Q+ S + TP ++ R+V ++ G S+ ++ D G +YSWG
Sbjct: 126 KVYAWGENTSRQVGSSVNVNEGTPMKVNSTLTDKRVVCISCGQSSSMVVTDNGEIYSWGC 185
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G + + P I + +E ++ G A++N G LY+WG
Sbjct: 186 NEVGQLGIGNYANHA-NPCKITTL------------IEKVVCGYAHVLALSNTGVLYVWG 232
Query: 314 KNQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG + P+++ V
Sbjct: 233 GNYCGQLGLGMKTNICNPVQLIV 255
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK A G+ H + +T++ +++G+NS C G + QG +L E I+
Sbjct: 54 IKTFAYGKGPHVLALTEDGKVYSWGHNS--HCELGNISAS--QGLIPMLVTKNLCNEFII 109
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
D CG H+L LT GKVY+ G Q G N+ TP V + +R+V +S
Sbjct: 110 DIACGSHHSLALTIEGKVYAWGENTSRQVGSSVNVNEGTPMKVNSTLTDKRVVCISCGQS 169
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+ V+D G+++ WG +E GQ+ + + CK + I V G + L++
Sbjct: 170 SSMVVTDNGEIYSWGCNEVGQLGIG----NYANHANPCKITTLIEKVVCGYAHVLALSNT 225
Query: 249 GLVYSWGYGLLGQ 261
G++Y WG GQ
Sbjct: 226 GVLYVWGGNYCGQ 238
>gi|375306445|ref|ZP_09771742.1| regulator of chromosome condensation RCC1 [Paenibacillus sp.
Aloe-11]
gi|375081481|gb|EHS59692.1| regulator of chromosome condensation RCC1 [Paenibacillus sp.
Aloe-11]
Length = 1307
Score = 90.9 bits (224), Expect = 8e-16, Method: Composition-based stats.
Identities = 83/287 (28%), Positives = 130/287 (45%), Gaps = 28/287 (9%)
Query: 56 FVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTF---GNNSFGQCGRGIVQEEDYQG 112
+V+ P + + +K + +G +HT+V+TDN G GNN+FGQ G + Y
Sbjct: 370 YVQSPQAISSVAGTVKKVVSGNSHTLVMTDNNGIIELYGTGNNTFGQLSDGTTNNK-YS- 427
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
F A L I D G + + L +SG V+S G A GQ GLG + T +
Sbjct: 428 --FFRIGAGLF--NIKDIAAGDNASYVLDQSGNVWSSGDNAKGQLGLGDFTPRSTFTQMP 483
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI 232
++ G + + + A +A+ G V+ GN GQ+ S V Q G++
Sbjct: 484 -DLSGIQAISANGAT--FIALKSDGTVYTVGNGAEGQLGNGTNANSNTPV--QVNGIADA 538
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
V +A+G +L G + ++G YG LG G +++ +P+T+ G
Sbjct: 539 VRIAAGYEHNLVLKANGKIVAFGLNNYGQLGDGTNENKN-----VPTTVSG------IGS 587
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ + AG GAI G+ +WG+N YGQLG + PL V V
Sbjct: 588 AQDIFAGYLNSGAIDRSGNTMLWGRNVYGQLGNNSFISSNTPLNVNV 634
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 45/324 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T IA GY T + G N++ QLG + S+ R P+PV
Sbjct: 189 VTKIAFGYYSTFFIGSGTT-----YAAGYNANGQLG-----------DGSTSYARTPVPV 232
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY-QGKWFCHNIADL 122
A+G H+I + + G N +GQ I Q + W N D
Sbjct: 233 G----DFMDAASGSVHSIAVKRDGAVVGTGANFYGQ----INQSSPWGSTDWKLFNNIDN 284
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
E + G+ +++ LT GKV GW GQ +G +LN ++G +
Sbjct: 285 AKE----VISGESYSVILTSDGKVIGSGWNGYGQLAIGTNLNTSFFSTTIKGFVH----- 335
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+S ++ V ++++G++ WG++ GQ+ + + +P+ +S G + V V+
Sbjct: 336 SISMGLNHVNEINERGELLNWGSNLIGQLGNGGVYVQSPQAISSVAGTVKKV-VSGNSHT 394
Query: 242 CTMLNDEGLVYSWGYG--LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
M ++ G++ +G G GQ + + K + G FN ++ + AG
Sbjct: 395 LVMTDNNGIIELYGTGNNTFGQLSDGTTNNKYSFFR---IGAGLFN----IKDIAAGDNA 447
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ G+++ G N GQLGLG
Sbjct: 448 SYVLDQSGNVWSSGDNAKGQLGLG 471
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 83/196 (42%), Gaps = 23/196 (11%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
++ F SG Y+ G+ A+GQ G G + TP V G+ + S +V + AV
Sbjct: 197 YSTFFIGSGTTYAAGYNANGQLGDGSTSYARTPVPV-----GDFMDAASGSVHSI-AVKR 250
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS-- 253
G V G G + YGQI++S ST L + +V SG S +L +G V
Sbjct: 251 DGAVVGTGANFYGQINQSSPWGSTDWKLFN--NIDNAKEVISGESYSVILTSDGKVIGSG 308
Query: 254 W-GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
W GYG L G ++ S T I K V S+ G I G L W
Sbjct: 309 WNGYGQLAIGTNLNTSFFSTTI------------KGFVHSISMGLNHVNEINERGELLNW 356
Query: 313 GKNQYGQLGLGTVEDQ 328
G N GQLG G V Q
Sbjct: 357 GSNLIGQLGNGGVYVQ 372
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 56/270 (20%)
Query: 83 ITDNEGAFTFGNNSFGQCG------RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
+T++ + GNN FGQ G R I D+ ++I + G +
Sbjct: 3 LTESGKVYAAGNNEFGQLGLRDTRMREIAVRVDHP-------------QEIREISAGGNQ 49
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+ F+ + +Y G ++GQ GLG N+ + V G I ++ D +LA+
Sbjct: 50 SAFVDAANDLYVTGANSEGQLGLGDTINKSSFMKVSGL---PPIKNVAVGRDHILALDVD 106
Query: 197 GDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
G+V+ G+++ GQ+ S + + LS GV+ I A ++ +L D V
Sbjct: 107 GNVWASGSNDAGQLGLGNFSSRLNFTK---LSSLNGVASI--FAGNKTSAAILADR-TVM 160
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF--- 306
WG G LG G V+R+ PT P + +K+ FG + F
Sbjct: 161 IWGSNWAGQLGLGDNVTRN-SPTASP--------IHNVTKI--------AFGYYSTFFIG 203
Query: 307 -GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G Y G N GQLG G+ P+ V
Sbjct: 204 SGTTYAAGYNANGQLGDGSTSYARTPVPVG 233
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 77/344 (22%), Positives = 123/344 (35%), Gaps = 65/344 (18%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K++ G N QLG D R + I + V HP +I+ ++ G + +
Sbjct: 8 KVYAAGNNEFGQLGLRDTRMR-----------EIAVRVDHPQ-EIREISAGGNQSAFVDA 55
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ G NS GQ G G D K ++ L I + G+DH L L G
Sbjct: 56 ANDLYVTGANSEGQLGLG-----DTINKSSFMKVSGLP--PIKNVAVGRDHILALDVDGN 108
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ G GQ GLG+ +++ + + G + + + A+ V WG++
Sbjct: 109 VWASGSNDAGQLGLGNFSSRLNFTKL-SSLNG--VASIFAGNKTSAAILADRTVMIWGSN 165
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKV 265
GQ+ + S V++I + G T G Y+ GY GQ
Sbjct: 166 WAGQLGLGDNVTRNSPTASPIHNVTKI----AFGYYSTFFIGSGTTYAAGYNANGQLGDG 221
Query: 266 SRSMKPTLIP---------------------------STLFGQ------------HQFNP 286
S S T +P + +GQ FN
Sbjct: 222 STSYARTPVPVGDFMDAASGSVHSIAVKRDGAVVGTGANFYGQINQSSPWGSTDWKLFNN 281
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
+ +I+G +T+ G + G N YGQL +GT + F
Sbjct: 282 IDNAKEVISGESYSVILTSDGKVIGSGWNGYGQLAIGTNLNTSF 325
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
++LTESGKVY+ G GQ GL +E V + I ++S+ + V
Sbjct: 1 MYLTESGKVYAAGNNEFGQLGLRDTRMREIAVRVD---HPQEIREISAGGNQSAFVDAAN 57
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY- 256
D++ G + GQ+ + + + G+ I +VA G L+ +G V++ G
Sbjct: 58 DLYVTGANSEGQLGLGDTINKSS--FMKVSGLPPIKNVAVGRDHILALDVDGNVWASGSN 115
Query: 257 --GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G SR L S+L G V S+ AG T AI + +WG
Sbjct: 116 DAGQLGLGNFSSRLNFTKL--SSLNG---------VASIFAGNKTSAAILADRTVMIWGS 164
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 165 NWAGQLGLG 173
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 133/313 (42%), Gaps = 72/313 (23%)
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
HP KH++ G H+ VIT+N FG N++GQ G I ++ L+
Sbjct: 37 HP----KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRI-----KPSARKPTSVKALKS 87
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
EK+ A CG+DHT+ T G VYS G DGQ GLGH + L+R + I LS
Sbjct: 88 EKVKLAACGRDHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLS 147
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS--------------------------------- 211
+ + A+++ G +F WG++ GQI+
Sbjct: 148 AGCNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYKHSAFVT 207
Query: 212 ---------ES--------EMQISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYS 253
ES + Q++ RV Q +GV + V GG +L ++ VY+
Sbjct: 208 VYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLGHVTRVCCGGEHTVVLTEKN-VYT 266
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
+G YG LG G + P + QH N SKV + G +T+ G LY
Sbjct: 267 FGRGQYGQLGHGTFLFEVHLPKAL------QHFCN--SKVRHIACGENHTAVVTDSGLLY 318
Query: 311 MWGKNQYGQLGLG 323
+G ++G+LGLG
Sbjct: 319 TFGDGRHGKLGLG 331
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CGY + T +L+ G +++ +LG + ++ R+P V+
Sbjct: 196 VSCGYKHSAFVTVYG----RLYTFGESANGRLGLQKEQ---------LANHRVPQQVQGV 242
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK---WFCHNIADLE 123
+ + G HT+V+T+ + +TFG +GQ G G E + K FC++
Sbjct: 243 LGHVTRVCCGGEHTVVLTE-KNVYTFGRGQYGQLGHGTFLFEVHLPKALQHFCNS----- 296
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
K+ CG++HT +T+SG +Y+ G G G+ GLG N NQ +P L
Sbjct: 297 --KVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTL 343
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G +LG+ D P +LV + L K Q+ H+A G ++ IT
Sbjct: 515 ELFSWGCGDGGRLGHGDTVSLEEP-KLVSA-----LSGKQTGKQVIHIACGSTYSAAITA 568
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG--QDHTLFLTES 143
+ +T+G ++G+ G G ED + L+G K++D CG TL +TE+
Sbjct: 569 DGELYTWGRGNYGRLGHG--SSEDQTVPML---VTGLKGLKVVDVSCGSGDAQTLSVTEN 623
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+V+S G G G+ G G + +TP L+ +++ IVK+ +A++ G V+ WG
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIAITKDGQVYSWG 682
Query: 204 NSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG 262
+ ++ +E + P++++ +G ++VDVA G + C L + G VYSWG Q
Sbjct: 683 KGDNQRLGHGTEEHVRYPKIMNGLQG-KKVVDVAVGSTHCLALTESGEVYSWGSNDQCQH 741
Query: 263 PKVSRSMKPTLIPSTLFG 280
R KP +PS L G
Sbjct: 742 FDTLRIAKP--VPSVLPG 757
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4052 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGTEV 4106
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G++Y+ G G G+ G G +Q P LV ++G R++ ++ S
Sbjct: 4107 VDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGS 4165
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + GV + V G
Sbjct: 4166 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VTKVECGSQFSVA 4224
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4225 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4275
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4276 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4315
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3956 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4010
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4011 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4070
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G ++V + AG IT
Sbjct: 4071 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------TEVVDIAAGGAHSACITA 4121
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG G EDQ P
Sbjct: 4122 AGELYTWGKGRYGRLGHGDSEDQLKP 4147
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G++++ CG ++ +T G++Y+ G G G+ G G +Q P LV G ++G ++V +
Sbjct: 550 GKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTG-LKGLKVVDV 608
Query: 184 S--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGS 240
S S L+V++ G V+ WG+ +YG++ TP+++ + + + IV V G
Sbjct: 609 SCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-IVKVRCGSQ 667
Query: 241 ACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ +G VYSWG G LG G ++ I + L G+ KV + G
Sbjct: 668 FSIAITKDGQVYSWGKGDNQRLGHG--TEEHVRYPKIMNGLQGK-------KVVDVAVGS 718
Query: 298 CTFGAITNFGHLYMWGKNQYGQ 319
A+T G +Y WG N Q
Sbjct: 719 THCLALTESGEVYSWGSNDQCQ 740
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3001 VAGGSKSLFAVTAEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3118
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3170
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3171 -ALTDEGLVFSWGDGDFGKLGRGGSE 3195
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 125/252 (49%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3968 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4021
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4022 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4080
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G + +VD+A+GG+ + G +Y+WG YG LG G
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRG-TEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHG 4139
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 4140 DSEDQ-LKPKLVEA-LQGYRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4192
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4193 GGSDGCKVPMKI 4204
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L+ + +++S G G G+ G G + E P LV G+ G++++ ++ A
Sbjct: 506 HYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ G+++ WG YG++ + T P +++ KG+ ++VDV+ G G A T+ + + G
Sbjct: 566 ITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGL-KVVDVSCGSGDAQTLSVTENG 624
Query: 250 LVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
V+SWG YG LG+G PK+ ++ I G QF+
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGS-QFSI------------- 670
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
AIT G +Y WGK +LG GT E +P
Sbjct: 671 --AITKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 95/172 (55%), Gaps = 11/172 (6%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +TD++ +++G+ +G+ GRG G I L G + CG
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDSLTGVGVTKVECGS 4219
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS-AVDCVLAV 193
++ LT+SG VY+ G G + G G ++ P V+G ++G++++ +++ ++ CV
Sbjct: 4220 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCT 4278
Query: 194 SDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
D G+V+ WG+++ GQ+ + + I PR+++ +G + ++ + GSA T+
Sbjct: 4279 ED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKINRVACGSAHTL 4327
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 53/337 (15%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P + + +K +A +G H
Sbjct: 3016 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3063
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3064 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3115
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3116 AAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3174
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + + G L G+V++W
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQA-VCQIECGAQFSLALTKSGVVWTW 3233
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF-------- 306
++ + F K V ++ G T F
Sbjct: 3234 ---------XXTKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIV 3284
Query: 307 --GHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+Y WG N +GQ G GT P V + GQK
Sbjct: 3285 ISKKVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQK 3321
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + E + +V+++ + AV+ +G V+ G + G+
Sbjct: 2968 WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGR 3027
Query: 210 ISE--SEMQISTPRVLSQCKG-VSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
+ S + PR ++ V + V V SGG T L +G V+SWG G G+ S
Sbjct: 3028 LGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3087
Query: 267 RSM--KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG- 323
R KP LI + ++ + G AIT+ G LY WG +YG+LG G
Sbjct: 3088 RMNCDKPRLIEAL--------KTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 324 -TVEDQPFPLKVAVG 337
T + +P +KV +G
Sbjct: 3140 NTTQLKPKMVKVLLG 3154
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 180 IVKLSSAVDCVLAVSDKGDVF--GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +++ A C L +S G ++ + N+ G P+ L Q IV +A+
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNNTLG-----------PQ-LVQGLASRNIVKIAA 500
Query: 238 --GGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G L+ ++SWG G LG G VS +P L+ S L G+ +V
Sbjct: 501 HPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLE-EPKLV-SALSGKQT---GKQVIH 555
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G AIT G LY WG+ YG+LG G+ EDQ P+ V
Sbjct: 556 IACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLV 597
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ + G ++ +T + +T+G + + G G +D+ + + L+G+K++
Sbjct: 4212 VTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIA 4266
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H + TE G+VY+ G +GQ G G N + P LV ++G++I +++
Sbjct: 4267 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKINRVACGSAH 4325
Query: 190 VLAVS 194
LA S
Sbjct: 4326 TLAWS 4330
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 21/143 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ +T + CG F+V TKS ++ G +LG+ VR P
Sbjct: 4210 VGVTKVECGSQFSVALTKSG----AVYTWGKGDYHRLGHGSD-----------DHVRRPR 4254
Query: 62 PVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
V+ ++ +ATG H + T++ +T+G+N GQ G G +A
Sbjct: 4255 QVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-----RLVA 4309
Query: 121 DLEGEKIMDAVCGQDHTLFLTES 143
L+G+KI CG HTL + S
Sbjct: 4310 ALQGKKINRVACGSAHTLAWSTS 4332
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 23/257 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
LA G HT V+T N + FG+N++GQ G G E K C I L+ EK+ C
Sbjct: 40 LACGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SESPVSKPTC--IKALKPEKVKFVAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ HT+ TE GKVY+ G ++GQ GLG ++ T ++ +I +LS+ A
Sbjct: 95 GRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAA 154
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI + + P ++ K +S V+ G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISW---VSCGYYHSAFITTEGEL 211
Query: 252 YSWG---YGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
Y++G G LG K+ + + P L+P P+ ++ G T N
Sbjct: 212 YTFGEPESGKLGLPSKLLINHRIPQLVPGI--------PEKVIQVACGGGHTVVLTEN-- 261
Query: 308 HLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 262 AVYTFGLGQFGQLGLGT 278
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 144/322 (44%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG T V T N KL+ G N+ QLG P + ++ P K
Sbjct: 40 LACGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSESPVSKP-----TCIKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K +A GR HTIV T+ + G NS GQ G G D + + H I +
Sbjct: 89 ---VKFVACGRTHTIVATEGGKVYATGGNSEGQLGLG-----DDEDRNTFHRIKFFTSQH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + LTE G+++ G ++GQ GL +++N C+ G+ I +S
Sbjct: 141 KIKQLSAGSSSSAALTEDGELFMWGDNSEGQIGLKNIDNV---CVPHQVTIGKPISWVSC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
++ +G+++ +G E G++ + R+ G+ +++ VA GG +
Sbjct: 198 GYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPEKVIQVACGGGHTVV 257
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L E VY++G +G LG G + + +PT+I + K+ + G
Sbjct: 258 LT-ENAVYTFGLGQFGQLGLGTFIFETSEPTVI--------EHIKDQKISYISCGENHTA 308
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 309 LITDTGLIYTFGDGRHGKLGLG 330
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 28/263 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG T+VAT+ K++ G NS+ QLG D + +F RI
Sbjct: 88 KVKFVACGRTHTIVATEGG----KVYATGGNSEGQLGLGDDEDRN-------TFHRIKFF 136
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+IK L+ G + + +T++ F +G+NS GQ G ++ H +
Sbjct: 137 TSQ--HKIKQLSAGSSSSAALTEDGELFMWGDNSEGQIGL-----KNIDNVCVPHQVTI- 188
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERI 180
G+ I CG H+ F+T G++Y+ G G+ GL L N P LV G E++
Sbjct: 189 -GKPISWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPG--IPEKV 245
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQCKGVSRIVDVASG 238
++++ + +++ V+ +G ++GQ+ + S P V+ K +I ++ G
Sbjct: 246 IQVACGGGHTVVLTENA-VYTFGLGQFGQLGLGTFIFETSEPTVIEHIKD-QKISYISCG 303
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ 261
+ ++ D GL+Y++G G G+
Sbjct: 304 ENHTALITDTGLIYTFGDGRHGK 326
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ ++CGY + T + L+ G +LG P +L+++ RIP V
Sbjct: 192 ISWVSCGYYHSAFITTEGE----LYTFGEPESGKLGL--------PSKLLINH-RIPQLV 238
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+N +TFG FGQ G G E + H ++
Sbjct: 239 PGIPEKVIQVACGGGHTVVLTEN-AVYTFGLGQFGQLGLGTFIFETSEPTVIEH----IK 293
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
+KI CG++HT +T++G +Y+ G G G+ GLG + NQ P L
Sbjct: 294 DQKISYISCGENHTALITDTGLIYTFGDGRHGKLGLGLENFTNQFVPTL 342
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
V+ ++ +G++ +GQ+ SE +S P + K ++ VA G + + + G V
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKP-EKVKFVACGRTHTIVATEGGKV 108
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+ G G LG G R+ T F + K++ L AG + A+T G
Sbjct: 109 YATGGNSEGQLGLGDDEDRN--------TFHRIKFFTSQHKIKQLSAGSSSSAALTEDGE 160
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL +++ P +V +G
Sbjct: 161 LFMWGDNSEGQIGLKNIDNVCVPHQVTIG 189
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 24/253 (9%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---RQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++ + LGH + P L+ E++ I+++S LA+SD G V WG+++ GQ
Sbjct: 65 --GSNDYSQLGHDLPTKRPQLI-PELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQ 121
Query: 210 I---SESEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ---- 261
+ +E E+ + P+V+ Q VS+ +V +A G + L G +YSWG + GQ
Sbjct: 122 LGHATEKEI-VQLPKVVRQL--VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 178
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
P L +TL G + ++ G I+ G ++ WG+N GQLG
Sbjct: 179 SPNDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Query: 322 LGTVEDQPFPLKV 334
L ++ +P ++
Sbjct: 232 LNDETNRAYPTQL 244
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T + G+N + Q G + + I +L+
Sbjct: 38 PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRP-------QLIPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I+ CG H+L L++ G+V S WG + LGH +E P +VR ++ + +V+
Sbjct: 91 VIIQISCGSRHSLALSDWGQVLS--WGDNDCGQLGHATEKEIVQLPKVVR-QLVSKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P L+ C R+
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPNDLTHCNYPLRLTTLLGIPLAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +R+ L G V
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 65/326 (19%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK----------------- 46
+ +ACG+ T+ T + K++ CG N SQLG+ P K+
Sbjct: 42 VQQVACGHRHTLFLTATG----KVYACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQISC 97
Query: 47 GNPLELVMS-----------------------FVRIPLPVKH-PSTQIKHLATGRAHTIV 82
G+ L +S V++P V+ S + +A G H++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T +++G+N +GQ G + D + + L G + CG +H+ +++
Sbjct: 158 LTSCGELYSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 143 SGKVYSCGWGAD--GQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDV 199
SG V+ GWG + GQ GL N+ P ++ G R V L +++G V
Sbjct: 216 SGAVF--GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL--TNEGGV 271
Query: 200 FGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASGGS-ACTMLNDEGLVYSW 254
F G YGQ+ S +EM PR++ + G S I VA G ++ G VY++
Sbjct: 272 FTCGAGAYGQLGHGFSSNEM---LPRMVMELMG-STITQVACGNRHTLALVPSRGKVYAF 327
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFG 280
G G GQ +RS K ++P + G
Sbjct: 328 GLGSSGQLG--TRSTKSLMLPQVVIG 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I + IACG + + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 198 IPLAAIACGGNHSFLISKSG----AVFGWGRNNCGQLGLNDETNRAYPTQL--KTLR--- 248
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++ +A G ++ +T+ G FT G ++GQ G G E + +
Sbjct: 249 -----TLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-----MLPRMVME 298
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G I CG HTL L S GKVY+ G G+ GQ G + P +V G
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
>gi|269793990|ref|YP_003313445.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096175|gb|ACZ20611.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 900
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 126/311 (40%), Gaps = 37/311 (11%)
Query: 50 LELVMSFVRIPLPVKHPSTQI-----------------KHLATGRAHTIVITDNEGAFTF 92
L LV S +P P++Q + +A G H++++ + +
Sbjct: 13 LSLVASAAPAQVPGADPASQTHRDQGDAPTAGGDHGSQQRVAAGWNHSLLVDYHGRVHAW 72
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG 152
G N+ GQ G G L G +++ G +H+L L + G VY+ G G
Sbjct: 73 GANASGQLGDGTTGRSLVPVPVAVDGA--LAGVRVVQVAAGPEHSLALADDGAVYAWGSG 130
Query: 153 ADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA----VDCVLAVSDKGDVFGWGNSEYG 208
GQ G G + P V G+++G R+V++ +A LAV D G V+ WG + G
Sbjct: 131 TSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDASTSLAVVDDGTVYTWGRNLGG 190
Query: 209 QISES--EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
+ + ++ ++ P L+ R V VA+G L +G ++WG G +G G
Sbjct: 191 RAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALTADGRAFAWGSRVNGAVGDGL 250
Query: 264 KVSRSMKPTLI--PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+ PT + L G + S + I + G Y WG +G LG
Sbjct: 251 TSGVQLGPTPVVGGGALSGARLVDAGSGLRR-------TAVIDDDGRAYGWGAGDHGALG 303
Query: 322 LGTVEDQPFPL 332
G + P P+
Sbjct: 304 TGGTANAPTPV 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 52/340 (15%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+A G+ +++ D + ++ G N+ QLG + S V +P+ V
Sbjct: 53 VAAGWNHSLLV----DYHGRVHAWGANASGQLGDGTTGR---------SLVPVPVAVDGA 99
Query: 67 --STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA-DLE 123
++ +A G H++ + D+ + +G+ + GQ G G V +G +A DL+
Sbjct: 100 LAGVRVVQVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSV-----EGSTVPVRVAGDLD 154
Query: 124 GEKIMDA-VCGQDH---TLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGE 178
G +++ G D +L + + G VY+ G G+ G + T P + G +EG
Sbjct: 155 GRRVVQVEAAGTDDASTSLAVVDDGTVYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGH 214
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE---SEMQIS-TPRVLSQCKGVSRIVD 234
R V++++ +A++ G F WG+ G + + S +Q+ TP V +R+VD
Sbjct: 215 RAVRVAAGHVTGVALTADGRAFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVD 274
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
SG +++D+G Y WG +G LG G + PT + + + Q +
Sbjct: 275 AGSGLRRTAVIDDDGRAYGWGAGDHGALGTG---GTANAPTPVLADMEALDQLGIR---- 327
Query: 292 SLIAGPCTFGAITNF-------GHLYMWGKNQYGQLGLGT 324
P + NF G L WG GQLG G
Sbjct: 328 -----PVQITSGQNFSVVLGADGRLAAWGNGTGGQLGNGA 362
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 69 QIKHLATGRAHT-IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
Q++ T A T + + D+ +T+G N G+ G + ED LEG +
Sbjct: 160 QVEAAGTDDASTSLAVVDDGTVYTWGRNLGGRAGHAV---EDLVLTEPTALAGALEGHRA 216
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIEGERIVKLS 184
+ G + LT G+ ++ G +G G G + + TP + G + G R+V
Sbjct: 217 VRVAAGHVTGVALTADGRAFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAG 276
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS----RIVDVASGGS 240
S + + D G +GWG ++G + + VL+ + + R V + SG +
Sbjct: 277 SGLRRTAVIDDDGRAYGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQITSGQN 336
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L +G + +WG G GQ + T + G +V + AG
Sbjct: 337 FSVVLGADGRLAAWGNGTGGQ---LGNGASATSWHAVAVGTDGVLDGVEVVHVSAGQRHT 393
Query: 301 GAITNFGHLYMWGKNQYGQLGLGT 324
A+ G +Y WG+ G+LG GT
Sbjct: 394 VALGRDGQVYAWGQGLSGELGNGT 417
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA+G + +++ G V++WG G LG G RS+ P +P + G +V
Sbjct: 53 VAAGWNHSLLVDYHGRVHAWGANASGQLGDG-TTGRSLVP--VPVAVDGALA---GVRVV 106
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ AGP A+ + G +Y WG GQLG G+VE P++VA
Sbjct: 107 QVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVA 150
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 90/234 (38%), Gaps = 46/234 (19%)
Query: 112 GKWFC---HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC--GWGADGQTG-LGHLNNQ 165
G+W H +A G++ + A G D + TE G V WGA G LG L +
Sbjct: 477 GRWLLRVPHVLA--LGDRAITASQGSDGSAATTEVGVVGHALTAWGAGADEGVLGELEDL 534
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ 225
+V+ + K + VD +A++ G V G +GQ++ P L
Sbjct: 535 RDRRVVQ-------VAKNAVNVDFEVALTGDGAVLARGTDTHGQVA-------VPPDLD- 579
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP-------------- 271
+ +V VA+G + L EG V SWG L P +
Sbjct: 580 ----AGVVQVAAGETFALALTGEGTVVSWGDPSLAVPPALGGRRAVQVAAAARTAYALLD 635
Query: 272 --TLIPSTLFGQHQFNPKSKVESLI--AGPCTFGA-ITNFGHLYMWGKNQYGQL 320
T++ G Q VES++ AG F A +T G + WG + GQL
Sbjct: 636 DGTVVAWGEDGDGQARVPDGVESVVQVAGGGRFAAAVTAGGLVRAWGAGEAGQL 689
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 31/309 (10%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEG-A 89
G D QLG+ D + P V+S P I + G HT +++E
Sbjct: 39 GRGEDGQLGHGDAEDRLVPT--VISGFDAP--------GITSVICGADHTTAYSEDEHQV 88
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G + + + L+G KI CG H L +T +G+V S
Sbjct: 89 YSWGWGDFGRLGHG-----NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSW 143
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ EG + +++ + AV++ GD++GWG YG
Sbjct: 144 GRNQNGQLGLGTTEDSLLPQTIQA-FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGN 202
Query: 210 ISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + P +S +G ++V VA G ++ G +Y++G YG LG G
Sbjct: 203 LGLGDRNDRFVPEKVSSVEG-DKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHG--- 258
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ L+P + + S + G A+T+ G LY WG N++GQ+G G
Sbjct: 259 --DFEDHLVPHKV----EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312
Query: 326 EDQPFPLKV 334
D P +V
Sbjct: 313 ADHCSPAQV 321
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G +H++ + T+G GQ G G D + + I+ + I +C
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHG-----DAEDRLVPTVISGFDAPGITSVIC 73
Query: 133 GQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G DHT +E +VYS GWG G+ G G+ + TP V+ ++G +I +L+ L
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA-LQGIKIKQLACGDSHCL 132
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV+ G+V WG ++ GQ+ + S P+ + +G+S + +A+G + ++G
Sbjct: 133 AVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS-VKMIAAGAEHTAAVTEDGD 191
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE--SLIAGPCTFG---A 302
+Y WG YG LG G + R +P + S VE ++ C +
Sbjct: 192 IYGWGWGRYGNLGLGDRNDR-----FVPEKV---------SSVEGDKMVLVACGWRHTIT 237
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G ED P KV
Sbjct: 238 VSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKV 269
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG + T + + + G N + QLG P + + +F I
Sbjct: 119 IKIKQLACGDSHCLAVTMAGE----VLSWGRNQNGQLGLGTTEDSLLP-QTIQAFEGI-- 171
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +A G HT +T++ + +G +G G G D ++ ++
Sbjct: 172 -------SVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLG-----DRNDRFVPEKVSS 219
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+EG+K++ CG HT+ ++ SG +Y+ GW GQ G G + P V ++
Sbjct: 220 VEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTS 278
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
++S +A++ G ++GWG +++GQ+
Sbjct: 279 QISGGWRHTMALTSDGKLYGWGWNKFGQV 307
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+AD ++ G H++ L + + G G DGQ G G ++ P ++ G +
Sbjct: 8 VADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISG-FDAP 66
Query: 179 RIVKLSSAVDCVLAVS-DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA 236
I + D A S D+ V+ WG ++G++ + + TP+ + +G+ +I +A
Sbjct: 67 GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLA 125
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G S C + G V SWG G LG G + + +L+P T+ Q V+ +
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLG-----TTEDSLLPQTI----QAFEGISVKMI 176
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AG A+T G +Y WG +YG LGLG D+ P KV+
Sbjct: 177 AAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVS 218
>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
Length = 985
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G + CG+ HT+FLT+ K++S G DGQ G G + G I
Sbjct: 6 DADGTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGI 65
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V++++ LAV+D G VF WG++E+GQ+ E I+ + + ++ +V VASG
Sbjct: 66 VQIAAGRAHSLAVADDGRVFAWGSNEHGQLG-MENTITWQEMPKRINQLNEVVQVASGSD 124
Query: 241 ACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
C L ++G VY WG G+ P++ + P +VE AG
Sbjct: 125 HCIALTEDGRVYVWGEQADGRCIHHPELVEHLNAI-------------PIVRVE---AGA 168
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
AI+ G ++ WG+N G+LG+ Q
Sbjct: 169 RHCVAISASGAVFTWGQNNSGELGMDDFRPQ 199
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 61/313 (19%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T +K +A G HTI +T + ++ G+N GQ GRG E G + + ++ G I
Sbjct: 10 TAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSE----GSFSIYPVSLTSGVGI 65
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETP------------------ 168
+ G+ H+L + + G+V++ G GQ G+ + + QE P
Sbjct: 66 VQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEVVQVASGSDH 125
Query: 169 CLVRGE-----IEGER-------------------IVKLSSAVDCVLAVSDKGDVFGWGN 204
C+ E + GE+ IV++ + +A+S G VF WG
Sbjct: 126 CIALTEDGRVYVWGEQADGRCIHHPELVEHLNAIPIVRVEAGARHCVAISASGAVFTWGQ 185
Query: 205 SEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-- 261
+ G++ + + T ++Q G+ +V+ A G + +L G +S+G LGQ
Sbjct: 186 NNSGELGMDDFRPQTSVHHVTQMDGLG-VVEAACGDNHTILLTHCGRTFSFGSDALGQCG 244
Query: 262 -GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G K+ + PT + S L G H V + AG C AI G Y +G N GQL
Sbjct: 245 FGKKLEKRPNPTAV-SDLIGSH-------VTRIAAGACHTIAIIR-GSPYPFGLNSSGQL 295
Query: 321 GLGTVEDQPFPLK 333
G G + Q P K
Sbjct: 296 GNGKIMTQSTPRK 308
>gi|118362896|ref|XP_001014642.1| myosin [Tetrahymena thermophila]
gi|89296440|gb|EAR94428.1| myosin [Tetrahymena thermophila SB210]
Length = 1927
Score = 90.9 bits (224), Expect = 9e-16, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED-------YQGKWFCHNIADL 122
I+H++ G H++ + + T+G N FGQ G IV E+D Y G
Sbjct: 1111 IQHISIGDTHSLTCSLSSKIHTWGWNDFGQLGVPIVDEDDPNQEQNVYTGTSIYSMNVPP 1170
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-RIV 181
+ ++I G +H+L L G+++S G GQ GL H N ETP + + +
Sbjct: 1171 QIKRIAQISSGSNHSLLLDHRGQIWSWGCNNRGQLGLNHYENMETPQKITYLMNPKTEFC 1230
Query: 182 KLSSAVDCVLAVSDKGDVFGWGN-SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ D A++ G +F W G+ +++ P++ I DV+ G
Sbjct: 1231 KVECRDDENYAITKSGQLFHWPTLGMQGECVNYPLEVVIPKI--------TIKDVSCGHK 1282
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L++ GL++S+G G LG G + P IP+ ++ + K+ + G
Sbjct: 1283 FVMILSNSGLLFSYGENKEGQLGLG-----DLNPRKIPTLVYCLR--DAGEKISQIDCGF 1335
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T+ G +Y WG GQLG GT ++ +P
Sbjct: 1336 KHTICKTSLGKVYTWGWGGRGQLGHGTTNNEIYP 1369
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
V PL V P IK ++ G ++++++ F++G N GQ G G + +C
Sbjct: 1261 VNYPLEVVIPKITIKDVSCGHKFVMILSNSGLLFSYGENKEGQLGLGDLNPRKIPTLVYC 1320
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
A GEKI CG HT+ T GKVY+ GWG GQ G G NN+ P
Sbjct: 1321 LRDA---GEKISQIDCGFKHTICKTSLGKVYTWGWGGRGQLGHGTTNNEIYP 1369
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSS 185
I D CG + L+ SG ++S G +GQ GLG LN ++ P LV GE+I ++
Sbjct: 1274 IKDVSCGHKFVMILSNSGLLFSYGENKEGQLGLGDLNPRKIPTLVYCLRDAGEKISQIDC 1333
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLS 224
+ + G V+ WG GQ+ PR+LS
Sbjct: 1334 GFKHTICKTSLGKVYTWGWGGRGQLGHGTTNNEIYPRILS 1373
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLN----NQETPCLVRGEI-------EGERIV 181
G H+L + S K+++ GW GQ G+ ++ NQE I + +RI
Sbjct: 1117 GDTHSLTCSLSSKIHTWGWNDFGQLGVPIVDEDDPNQEQNVYTGTSIYSMNVPPQIKRIA 1176
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKG-VSRIVDVASGG 239
++SS + L + +G ++ WG + GQ+ + + + TP+ ++ + V
Sbjct: 1177 QISSGSNHSLLLDHRGQIWSWGCNNRGQLGLNHYENMETPQKITYLMNPKTEFCKVECRD 1236
Query: 240 SACTMLNDEGLVYSWGYGLLG-QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ G ++ W LG QG V+ ++ + PK ++ + G
Sbjct: 1237 DENYAITKSGQLFHWP--TLGMQGECVNYPLEVVI------------PKITIKDVSCGHK 1282
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++N G L+ +G+N+ GQLGLG + + P V
Sbjct: 1283 FVMILSNSGLLFSYGENKEGQLGLGDLNPRKIPTLV 1318
>gi|283132464|dbj|BAI63634.1| myosin10 [Tetrahymena thermophila]
Length = 1918
Score = 90.9 bits (224), Expect = 9e-16, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED-------YQGKWFCHNIADL 122
I+H++ G H++ + + T+G N FGQ G IV E+D Y G
Sbjct: 1119 IQHISIGDTHSLTCSLSSKIHTWGWNDFGQLGVPIVDEDDPNQEQNVYTGTSIYSMNVPP 1178
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-RIV 181
+ ++I G +H+L L G+++S G GQ GL H N ETP + + +
Sbjct: 1179 QIKRIAQISSGSNHSLLLDHRGQIWSWGCNNRGQLGLNHYENMETPQKITYLMNPKTEFC 1238
Query: 182 KLSSAVDCVLAVSDKGDVFGWGN-SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ D A++ G +F W G+ +++ P++ I DV+ G
Sbjct: 1239 KVECRDDENYAITKSGQLFHWPTLGMQGECVNYPLEVVIPKI--------TIKDVSCGHK 1290
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L++ GL++S+G G LG G + P IP+ ++ + K+ + G
Sbjct: 1291 FVMILSNSGLLFSYGENKEGQLGLG-----DLNPRKIPTLVYCLR--DAGEKISQIDCGF 1343
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
T+ G +Y WG GQLG GT ++ +P
Sbjct: 1344 KHTICKTSLGKVYTWGWGGRGQLGHGTTNNEIYP 1377
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
V PL V P IK ++ G ++++++ F++G N GQ G G + +C
Sbjct: 1269 VNYPLEVVIPKITIKDVSCGHKFVMILSNSGLLFSYGENKEGQLGLGDLNPRKIPTLVYC 1328
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
A GEKI CG HT+ T GKVY+ GWG GQ G G NN+ P
Sbjct: 1329 LRDA---GEKISQIDCGFKHTICKTSLGKVYTWGWGGRGQLGHGTTNNEIYP 1377
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSS 185
I D CG + L+ SG ++S G +GQ GLG LN ++ P LV GE+I ++
Sbjct: 1282 IKDVSCGHKFVMILSNSGLLFSYGENKEGQLGLGDLNPRKIPTLVYCLRDAGEKISQIDC 1341
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLS 224
+ + G V+ WG GQ+ PR+LS
Sbjct: 1342 GFKHTICKTSLGKVYTWGWGGRGQLGHGTTNNEIYPRILS 1381
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLN----NQETPCLVRGEI-------EGERIV 181
G H+L + S K+++ GW GQ G+ ++ NQE I + +RI
Sbjct: 1125 GDTHSLTCSLSSKIHTWGWNDFGQLGVPIVDEDDPNQEQNVYTGTSIYSMNVPPQIKRIA 1184
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKG-VSRIVDVASGG 239
++SS + L + +G ++ WG + GQ+ + + + TP+ ++ + V
Sbjct: 1185 QISSGSNHSLLLDHRGQIWSWGCNNRGQLGLNHYENMETPQKITYLMNPKTEFCKVECRD 1244
Query: 240 SACTMLNDEGLVYSWGYGLLG-QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ G ++ W LG QG V+ ++ + PK ++ + G
Sbjct: 1245 DENYAITKSGQLFHWP--TLGMQGECVNYPLEVVI------------PKITIKDVSCGHK 1290
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++N G L+ +G+N+ GQLGLG + + P V
Sbjct: 1291 FVMILSNSGLLFSYGENKEGQLGLGDLNPRKIPTLV 1326
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 120/259 (46%), Gaps = 39/259 (15%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG--EKIMDAVC--GQD 135
I +T ++ F FGNN G G V K +EG +K M A+
Sbjct: 38 AIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRK--------IEGLCKKGMFALAFGSGP 89
Query: 136 HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + TE+G++YS WG +G Q G G N P + G + +I +++ L +
Sbjct: 90 HVVAATENGEIYS--WGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVL 147
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+D+G+VF WG + GQ+ S + ISTPR + G R+V +A G ++ + D G VY
Sbjct: 148 TDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVY 207
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-----AIT 304
WGY G LG G V++ PS S + LI G A++
Sbjct: 208 GWGYNGNGQLGLGNNVNQ-------PSPC-------KVSSLNGLIISQAACGYAHSMALS 253
Query: 305 NFGHLYMWGKNQYGQLGLG 323
+ G++Y WG N YGQLG G
Sbjct: 254 DEGNIYTWGANSYGQLGTG 272
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 19/241 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + T+N +++G+N + Q G G QG +L KI CG H+L
Sbjct: 90 HVVAATENGEIYSWGHNGYCQLGNGTTN----QGLLPHRITGNLGSCKISQIACGSHHSL 145
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT+ G+V++ G+ GQ G G N TP V + G+R+V ++ LAV D G+
Sbjct: 146 VLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGE 205
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWG- 255
V+GWG + GQ+ + + +P +S G+ I+ A+ G A +M L+DEG +Y+WG
Sbjct: 206 VYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGL--IISQAACGYAHSMALSDEGNIYTWGA 263
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
YG LG G K + + S G+ + + A A+T G +YMWG
Sbjct: 264 NSYGQLGTGNKANLCGAAKIGES--IGRFIDIAATHYAHISA------AMTQTGKVYMWG 315
Query: 314 K 314
+
Sbjct: 316 Q 316
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S +I +A G H++V+TD F +G N+ GQ G G K ++ L G++
Sbjct: 131 SCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKV----VSVLGGKR 186
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CGQ +L + +SG+VY G+ +GQ GLG+ NQ +PC V + G I + +
Sbjct: 187 VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKV-SSLNGLIISQAACG 245
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA--CTM 244
+A+SD+G+++ WG + YGQ+ + + + + R +D+A+ A
Sbjct: 246 YAHSMALSDEGNIYTWGANSYGQLGTGN-KANLCGAAKIGESIGRFIDIAATHYAHISAA 304
Query: 245 LNDEGLVYSWG 255
+ G VY WG
Sbjct: 305 MTQTGKVYMWG 315
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
+ +++T+ +V++ G + GLG + + TP + G + + V+A +
Sbjct: 36 NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAAT 95
Query: 195 DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G+++ WG++ Y Q+ + Q P ++ G +I +A G +L D G V++
Sbjct: 96 ENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFA 155
Query: 254 WGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WGY G +G G + S P + S L G+ +V S+ G + A+ + G +Y
Sbjct: 156 WGYNNCGQVGSGATANIS-TPRKVVSVLGGK-------RVVSIACGQTSSLAVVDSGEVY 207
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKVA 335
WG N GQLGLG +QP P KV+
Sbjct: 208 GWGYNGNGQLGLGNNVNQPSPCKVS 232
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 23/282 (8%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
IP+ VK + ++ G H++ + + + +G+ ++GQ + ++ F
Sbjct: 84 IPVRVKGLK-DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRD-------FTTP 135
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ E + I+ G D +L + G V++ G G+ G+G L P V+G +
Sbjct: 136 VKVKELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGL---K 192
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+V +S+ + LA+ G V+ WG +E G++ + T V + KG+S ++ +++G
Sbjct: 193 DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAG 252
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G LN +G V+ WG G++ + K+ S P I +KV ++ AG
Sbjct: 253 GFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWL----------NKVVAIAAGYR 302
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
A+ + G +++WG N YG LG V + F L V V G K
Sbjct: 303 HSIALKDDGTVWVWGHNSYGVLG-SNVGEHSFLL-VQVKGLK 342
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 117 HNIADLEGE--KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
N +L+GE K++ + G HTL + + G V++ G+ GQ G G + P V+G
Sbjct: 32 ENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGL 91
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIV 233
+ +V +S+ LA+ G V+ WG++ YGQ S+ +TP + K + IV
Sbjct: 92 ---KDVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTP---VKVKELKNIV 145
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+A+G + +G V++WG +G LG G S+KP+ +P + G V
Sbjct: 146 AIAAGWDFSLAVGSDGSVWAWGINNHGELGIG-----SLKPSAVPVKVKGLKD------V 194
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
++ AG A+ G ++ WG N+ G+LG ED + V V G
Sbjct: 195 VAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKG 242
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 122/314 (38%), Gaps = 72/314 (22%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIADLEGEKIMD 129
+A GR H++ +T N + +GNN+FGQ GR Y+ KW + ++
Sbjct: 347 VAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL---------DNVVA 397
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG---------------- 173
G HTL + G V+S G GQ G G + P V+G
Sbjct: 398 IATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEAGSQHSLA 457
Query: 174 --------------EIEGER------------------IVKLSSAVDCVLAVSDKGDVFG 201
+ E+ I +++ +D +L + G+++G
Sbjct: 458 VDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWG 517
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
GN Y + ++ +S+ L + + + +A+G + +G V+SWG L
Sbjct: 518 CGNDFYFR-KFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDN 576
Query: 262 GPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
K ++ S KP I S V + AG A+ G ++ WG N YGQL
Sbjct: 577 KKKYLNFSEKPVKIKGL----------SGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQL 626
Query: 321 GLGTVEDQPFPLKV 334
G GT E P++V
Sbjct: 627 GNGTRETSFVPVRV 640
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 135/328 (41%), Gaps = 35/328 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA G+ F++ ++ G+N+ +LG + +P+ V
Sbjct: 144 IVAIAAGWDFSLAVGSDGS----VWAWGINNHGELGIGSLKPSA-----------VPVKV 188
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + ++ G H++ + + +++G N G+ G ++ ++D
Sbjct: 189 KGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-- 245
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++ G H++ L + G V+ WG G ++N P +R ++V +
Sbjct: 246 ---VIAISAGGFHSIALNKDGAVWI--WGGGIIEKNGKIDNSYIPVRIRWL---NKVVAI 297
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
++ +A+ D G V+ WG++ YG + + + S +L Q KG+ +V VA+G
Sbjct: 298 AAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSF--LLVQVKGLKNVVAVAAGRLHSV 355
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
L G +++WG GQ + + S L ++ V ++ G AI
Sbjct: 356 ALTKNGTIWAWGNNAFGQLGRENNSFSLNL-------PYKVKWLDNVVAIATGGSHTLAI 408
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G ++ WG N GQLG GT + P
Sbjct: 409 KRDGTVWSWGANNKGQLGNGTYKSSYIP 436
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 148/381 (38%), Gaps = 84/381 (22%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +A G +V TK N ++ G N+ QLG ++ N L +P V
Sbjct: 344 VVAVAAGRLHSVALTK----NGTIWAWGNNAFGQLG-----RENNSFSL-----NLPYKV 389
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE--------------- 108
K + +ATG +HT+ I + +++G N+ GQ G G +
Sbjct: 390 KWLDNVVA-IATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLV 448
Query: 109 ----------DYQGK-WFCHNIADLEGEK------------------IMDAVCGQDHTLF 139
D G W I + EK I + G D+ L
Sbjct: 449 EAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILV 508
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
L + G ++ CG + + T + I+ R +++ LAV G V
Sbjct: 509 LRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVR--SIAAGYFHSLAVRTDGTV 566
Query: 200 FGWGNS------EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ WG++ +Y SE ++I KG+S +V VA+G L +G V+S
Sbjct: 567 WSWGDTNLDNKKKYLNFSEKPVKI---------KGLSGVVKVAAGKYHSLALKKDGTVWS 617
Query: 254 WGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
WGY GQ +R + + +P + G + V ++ AG A+ G +++WG
Sbjct: 618 WGYNAYGQLGNGTR--ETSFVPVRVKGLNN------VVAIAAGDYHSMALKKDGTVWVWG 669
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N GQLG +E PLKV
Sbjct: 670 SNIRGQLGRRNIEFSTVPLKV 690
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 30/253 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
IT+IA G + +V KD N+ +GCG + ++ + + + V +R+ +
Sbjct: 496 ITEIAGGLDYILVL--RKDGNI--WGCGND------FYFRKFTDSSVSSVTKLIRLD-NI 544
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K+ ++ +A G H++ + + +++G+ + ++ Y F ++
Sbjct: 545 KN----VRSIAAGYFHSLAVRTDGTVWSWGDTNLDN-------KKKYLN--FSEKPVKIK 591
Query: 124 G-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G ++ G+ H+L L + G V+S G+ A GQ G G P V+G +V
Sbjct: 592 GLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVA 648
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ +A+ G V+ WG++ GQ+ ++ ST V + + + +V +A+G +
Sbjct: 649 IAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFST--VPLKVEKLDNVVAIAAGDTHS 706
Query: 243 TMLNDEGLVYSWG 255
L +G V+ WG
Sbjct: 707 VALKKDGTVWVWG 719
>gi|301786789|ref|XP_002928812.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Ailuropoda melanoleuca]
Length = 468
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 32/266 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I+ + G H+ V+TD+ G F G N GQ G G ++ Y C ++ D I
Sbjct: 56 IRRITGGGGHSAVVTDDGGLFVCGLNKDGQLGLGHTEDVLYFTA--CRSLLDC---PIQQ 110
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAV 187
CG D T+ LTESG+V SCG + GQ G+ H + C+V IE E++V +++ +
Sbjct: 111 VACGWDFTIILTESGQVLSCGSNSFGQLGVPHGPRR---CMVPQAIELLSEKVVCIAAGL 167
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS---QCKGVSRIVDVASGGSACTM 244
LA + G VF WG ++ S ++ + L K SR+ + + + C +
Sbjct: 168 RHALAATASGIVFQWGTG----LASSGRRLCPGQTLPPFLTAKEPSRVTGLENSKATCVL 223
Query: 245 --------LNDEGLVYSWGYGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIA 295
L D G +Y WG GQ ++ + P I + F KV S+ +
Sbjct: 224 AGSDHSASLTDAGELYVWGSNKHGQLASLAAFLPMPQKIEAHCF------QNEKVTSVWS 277
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLG 321
G A T G ++ WG+ YGQLG
Sbjct: 278 GWTHLVAQTETGKVFTWGRADYGQLG 303
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 22/271 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL-EGEKIMDA 130
HL A D EG FG NS+GQ G G +ED + + D + E I
Sbjct: 6 HLGVLAAQYSYEIDREGQ-KFGANSYGQLGLG--HKEDV---FLPQQLNDFCKPECIRRI 59
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G H+ +T+ G ++ CG DGQ GLGH + R ++ I +++ D
Sbjct: 60 TGGGGHSAVVTDDGGLFVCGLNKDGQLGLGHTEDVLYFTACRSLLDCP-IQQVACGWDFT 118
Query: 191 LAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+ +++ G V G++ +GQ + + P+ + ++V +A+G
Sbjct: 119 IILTESGQVLSCGSNSFGQLGVPHGPRRCMVPQAIELLS--EKVVCIAAGLRHALAATAS 176
Query: 249 GLVYSWGYGLLGQGPKVS--RSMKPTLI---PSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G+V+ WG GL G ++ +++ P L PS + G SK ++AG ++
Sbjct: 177 GIVFQWGTGLASSGRRLCPGQTLPPFLTAKEPSRVTGLE----NSKATCVLAGSDHSASL 232
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ G LY+WG N++GQL P P K+
Sbjct: 233 TDAGELYVWGSNKHGQLA-SLAAFLPMPQKI 262
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 151/357 (42%), Gaps = 53/357 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I G G + V T LF CGLN D QLG E V+ F +
Sbjct: 56 IRRITGGGGHSAVVTDDGG----LFVCGLNKDGQLGL-------GHTEDVLYFTACRSLL 104
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG------RGIVQEEDYQGKWFCH 117
P I+ +A G TI++T++ + G+NSFGQ G R +V +
Sbjct: 105 DCP---IQQVACGWDFTIILTESGQVLSCGSNSFGQLGVPHGPRRCMVPQ---------- 151
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+L EK++ G H L T SG V+ G G +G Q P + + E
Sbjct: 152 -AIELLSEKVVCIAAGLRHALAATASGIVFQWGTGL-ASSGRRLCPGQTLPPFLTAK-EP 208
Query: 178 ERIVKL-SSAVDCVLA-------VSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKG 228
R+ L +S CVLA ++D G+++ WG++++GQ++ + P ++ + C
Sbjct: 209 SRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLASLAAFLPMPQKIEAHCFQ 268
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMK-PTLIPSTLFGQHQF 284
++ V SG + + G V++WG YG LG+ + K PS Q
Sbjct: 269 NEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLESHEDWKLQNQDPSRPCSGPQK 328
Query: 285 NPKSKVESLI-AGPCTFGAITNF----GHLYMWGKNQYGQLGLGTVED--QPFPLKV 334
+ S + L A + G+ N G Y WG N++G G G+ D P P++
Sbjct: 329 SMPSSLHCLTGAAEVSCGSEHNLAVIGGTCYSWGWNEHGMCGDGSEADIWAPKPVQA 385
>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
Length = 484
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 50/291 (17%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
MS VR+ + P++ H+I+IT++ A ++G N GQ G G + D
Sbjct: 108 MSGVRVRSVISGPTS---------VHSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTV 158
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
I L G I++A CG++HTL LT+ GKV++ G GQ GLG+ N P +
Sbjct: 159 -----IESLAGFNIVEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGN-ENAAVPSPTQI 212
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVS 230
G +VK++ + + + +G ++ +G EYGQ+ ++ + +++ ++ C+ V
Sbjct: 213 VYTGPPVVKVACGAEFSMVIDCRGALYSFGCPEYGQLGNNTDGQYFVTSNKMAYDCELVP 272
Query: 231 R---------------------IVDVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVS 266
R +VD+ G + L+ + V++W GYG LG +
Sbjct: 273 RRISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLGHSEQKD 332
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CTFGAITNFGHLYMWGKNQ 316
+ P L+ + P ++ AG + G + N G LY+WG+ +
Sbjct: 333 EHV-PRLVKMFDY------PGRGARTIYAGAFYSMGIMDNGGQLYLWGQTK 376
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 173 GEIEGERIVKLSSAVDCV--LAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGV 229
G + G R+ + S V + +++ G WG ++ GQ+ + ++ P V+ G
Sbjct: 106 GSMSGVRVRSVISGPTSVHSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGF 165
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+ IV+ A G + L D+G V+++G +GQ + + +PS + P K
Sbjct: 166 N-IVEAACGRNHTLCLTDDGKVFAFGENKMGQ---LGLGNENAAVPSPTQIVYTGPPVVK 221
Query: 290 VESLIAGPCTFGAITN-FGHLYMWGKNQYGQLGLGT 324
V A F + + G LY +G +YGQLG T
Sbjct: 222 V----ACGAEFSMVIDCRGALYSFGCPEYGQLGNNT 253
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 27/260 (10%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
+LA G HT +IT N + FG+N++GQ G G K C + L+ EK+ A
Sbjct: 84 YLACGDEHTAIITGNNKLYMFGSNNWGQLGLG---SRSTVSKPTC--VKALKPEKVKFAA 138
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL LTE GKVY+ G +GQ GLG ++ T + ++ +LS+ +
Sbjct: 139 CGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSA 198
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G++F WG++ GQI + + P ++ K ++ I + G + EG
Sbjct: 199 ALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWI---SCGYYHSAFVTMEGE 255
Query: 251 VYSWGY---GLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG--AIT 304
+Y++G G LG ++ + K P L+P E +I C G +
Sbjct: 256 LYTFGETECGKLGLPRQLLMNHKVPQLVPGI------------PEKVIQVACGGGHTVVL 303
Query: 305 NFGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 304 TEKAVYTFGLGQFGQLGLGT 323
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 36/324 (11%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T +ACG T + T N KL+ G N+ QLG P + V+ P K
Sbjct: 83 TYLACGDEHTAIITG----NNKLYMFGSNNWGQLGLGSRSTVSKP-----TCVKALKPEK 133
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V+T+ + G N+ GQ G G D + + H I
Sbjct: 134 -----VKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLG-----DTEDRNTFHPICFFTS 183
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ ++ G + + LT G ++ G ++GQ GL ++ N C+ G+ I +
Sbjct: 184 QHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNV---CVPHQVTVGKPIAWI 240
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSAC 242
S V+ +G+++ +G +E G++ + +V G+ +++ VA GG
Sbjct: 241 SCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPEKVIQVACGGGHT 300
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L E VY++G +G LG G + + +P ++ K+ + G
Sbjct: 301 VVLT-EKAVYTFGLGQFGQLGLGTFIFETAEPKILEPI--------KDQKIIYISCGENH 351
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 352 TALITDVGLMYTFGDGRHGKLGLG 375
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 28/263 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ACG T+V T+ K++ G N++ QLG D + N + F
Sbjct: 133 KVKFAACGRNHTLVLTEEG----KVYAAGGNNEGQLGLGDTEDR-NTFHPICFFTS---- 183
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+H Q+K L+ G + +T + F +G+NS GQ G V C
Sbjct: 184 -QH---QLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPN-------VCVPHQVT 232
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERI 180
G+ I CG H+ F+T G++Y+ G G+ GL L N + P LV G E++
Sbjct: 233 VGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGI--PEKV 290
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASG 238
++++ + +++K V+ +G ++GQ+ + + P++L K +I+ ++ G
Sbjct: 291 IQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFIFETAEPKILEPIKD-QKIIYISCG 348
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ 261
+ ++ D GL+Y++G G G+
Sbjct: 349 ENHTALITDVGLMYTFGDGRHGK 371
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 26/169 (15%)
Query: 7 IACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+CGY + T + L FG CG K G P +L+M+ ++P V
Sbjct: 240 ISCGYYHSAFVTMEGE--LYTFGETECG-------------KLGLPRQLLMNH-KVPQLV 283
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + +TFG FGQ G G E + K + ++
Sbjct: 284 PGIPEKVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFIFETAEPKI----LEPIK 338
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI+ CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 339 DQKIIYISCGENHTALITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTL 387
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 199 VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
++ +G++ +GQ+ S +S P + K ++ A G + +L +EG VY+ G
Sbjct: 101 LYMFGSNNWGQLGLGSRSTVSKPTCVKALKP-EKVKFAACGRNHTLVLTEEGKVYAAGGN 159
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLF-GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G LG G R+ T P F QHQ ++ L AG T A+T G+L+MWG
Sbjct: 160 NEGQLGLGDTEDRN---TFHPICFFTSQHQ------LKQLSAGSNTSAALTVDGNLFMWG 210
Query: 314 KNQYGQLGLGTVEDQPFPLKVAVG 337
N GQ+GL V + P +V VG
Sbjct: 211 DNSEGQIGLKNVPNVCVPHQVTVG 234
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 140/309 (45%), Gaps = 38/309 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRK--KGNPLELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTI 81
KL+ CG ++ +LG D + P+ + FV IK +A +G H +
Sbjct: 3014 KLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFV------------IKKVAVHSGGKHAL 3061
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D I L+ ++I D CG H+ +
Sbjct: 3062 ALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKL-----IETLKSKRIRDIACGSGHSAAIA 3116
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
+G++Y+ G G G+ G G Q P LV+ + G R+V+++ S +A++ G V
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLV-GHRVVQVACGSRDAQTMALTTDGCV 3175
Query: 200 FGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
+ WG+ ++G++ TP V+ + G+ +V V G L G V++WG
Sbjct: 3176 YSWGDGDFGKLGRGGSDGCYTPLVVERLNGLG-VVQVECGAQFSLALTKYGEVWTWGKGD 3234
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Y LG G KPTL+ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3235 YFRLGHGND-HHVRKPTLVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYAWGDN 3285
Query: 316 QYGQLGLGT 324
+GQ G GT
Sbjct: 3286 DHGQQGNGT 3294
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI--VKLSSAV 187
+ G + TLF +T GKVYS G+GA G+ G+G ++ P L+ I+ I V +SS
Sbjct: 3981 LAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLES-IQHVFIKKVAVSSGG 4039
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+S +G V+ WG + G++ ++M P+++ GV I+D+A GG +
Sbjct: 4040 KHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGV-EIIDIACGGHHSAAIT 4098
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G +Y+WG YG LG G PKV +++ + G +G
Sbjct: 4099 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG--------------SG 4144
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ +++ WG YG+LG G + PLK+
Sbjct: 4145 DAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4182
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG NN + P L + I+ V + S
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKK---VAVHS 3055
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + M + P+++ K RI D+A G
Sbjct: 3056 GGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKS-KRIRDIACGSGHSAA 3114
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G V+++ +P L+ TL G +V + G
Sbjct: 3115 IASNGELYTWGLGEYGRLGHGDTVTQA-RPKLV-QTLVGH-------RVVQVACGSRDAQ 3165
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G +Y WG +G+LG G + PL V
Sbjct: 3166 TMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVV 3200
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 38/266 (14%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + +T + +++GN G+ G G D I L + I+ CG ++
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKL-----IEALLEKNIVFIACGSTYSA 574
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDK 196
L+ SG++Y+ G G G+ G G+ ++ P LV ++G +V ++ S L V+
Sbjct: 575 ALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLV-TTLKGHTVVHVACGSGDSQTLCVTAS 633
Query: 197 GDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G VF WG+ +YG++ S TP+++ + ++ +V V G L G VY+WG
Sbjct: 634 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN-VVKVFCGSQFSAALTAHGEVYTWG 692
Query: 256 YG---LLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G LG G PK+ S++ K++ L G +T
Sbjct: 693 KGDTYRLGHGSEEHVRYPKIIESLR----------------DKKIKDLSVGATHILVLTE 736
Query: 306 FGHLYMWGKNQYGQLG--LGTVEDQP 329
+Y WG+N YGQ+ LG+V +P
Sbjct: 737 DQFVYGWGRNDYGQIDPTLGSVISEP 762
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 28/212 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + N +L+ GL +LG+ D + P +LV + V
Sbjct: 3101 RIRDIACGSGHSAAIAS----NGELYTWGLGEYGRLGHGDTVTQARP-KLVQTLV----- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---I 119
H Q+ + A T+ +T + +++G+ FG+ GRG G C+ +
Sbjct: 3151 -GHRVVQVA-CGSRDAQTMALTTDGCVYSWGDGDFGKLGRG--------GSDGCYTPLVV 3200
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEG 177
L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G + G
Sbjct: 3201 ERLNGLGVVQVECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-LRG 3257
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
++IV ++ LAV+D G V+ WG++++GQ
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3289
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + +++G H + ++ +++G G+ G G D I DL
Sbjct: 4025 IQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKL-----IEDL 4079
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G ++Q P +V ++ +++
Sbjct: 4080 LGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA-LQDYKVID 4138
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ ++ V G
Sbjct: 4139 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VIKVECGS 4197
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4198 QFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4248
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A ++ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4249 SLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKK 4293
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 14/227 (6%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
MS+ R L +I +A G H+ IT +T+G +G+ G G D +
Sbjct: 4068 MSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG-----DSDDQ 4122
Query: 114 WFCHNIADLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ L+ K++D C G TL +T+ V+S G G G+ G G + + P +
Sbjct: 4123 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4182
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVS 230
+ G ++K+ +A++ G V+ WG +Y ++ ++ + PR ++ +G
Sbjct: 4183 -DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-K 4240
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+I+ +A+G C +D+G V++WG G LG G S +P L+
Sbjct: 4241 KIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG-TTSALHRPRLV 4286
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ G VYS G G G+ G G + + P L+ +E + IV ++ A+S
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLE-KNIVFIACGSTYSAALSV 578
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + P +++ KG + +V VA SG S + G+V+
Sbjct: 579 SGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHT-VVHVACGSGDSQTLCVTASGIVF 637
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T G +
Sbjct: 638 SWGDGDYGKLGRG-GTDGSKTPKIVDKLL--------DINVVKVFCGSQFSAALTAHGEV 688
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
Y WGK +LG G+ E +P
Sbjct: 689 YTWGKGDTYRLGHGSEEHVRYP 710
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ H+A +G + T+ +T + F++G+ +G+ GRG G + L +
Sbjct: 615 VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG-----GTDGSKTPKIVDKLLDINV 669
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG + LT G+VY+ G G + G G + P ++ + ++I LS
Sbjct: 670 VKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIES-LRDKKIKDLSVGA 728
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+L +++ V+GWG ++YGQI + + + L ++ +ASG
Sbjct: 729 THILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASG 779
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ G ++GWG++ GQ+ E ++ P + C+ +S R + +A G
Sbjct: 3934 DWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLP---APCESLSALRPIQLAGGEQTLFA 3990
Query: 245 LNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ +G VYS GYG LG G S M PTL+ S QH F K V S G
Sbjct: 3991 VTADGKVYSTGYGAAGRLGIGGTDS-VMIPTLLESI---QHVFIKKVAVSS---GGKHCL 4043
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
A+++ GH+Y WG+ G+LG G
Sbjct: 4044 ALSSEGHVYSWGEGDDGKLGHG 4065
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 237 SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
S G L +G VYSWG G LG G VS +P LI + L + + +
Sbjct: 516 SDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYD-EPKLIEALL--------EKNIVFI 566
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A++ G LY WG+ YG+LG G +D P V
Sbjct: 567 ACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLV 607
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 32/229 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D ++PL
Sbjct: 4135 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKVPLK 4181
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4182 IDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4236
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + ++ G+V++ G +GQ G G + P LV ++G++I
Sbjct: 4237 LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA-LQGKKIT 4295
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
+++ LA W ++ Q S M STP K +S
Sbjct: 4296 RVACGSAHTLA---------WSTAKATQ---SRMPASTPMEYDLVKDLS 4332
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ G+ G G ++EE + + + A CG HTL LT+ GK+Y+C
Sbjct: 4 YCWGSTVHGELGLGGIEEEQVMTP---REMDWSQAANVQQAACGGSHTLLLTKDGKLYTC 60
Query: 150 GWGADGQTGLGHLNN---QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G GQ LGH N + P + +E + ++S + LA+++ G +F WG++
Sbjct: 61 GNNDHGQ--LGHDTNNLPNKRPQFISA-LENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117
Query: 207 YGQISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ +S PR++ +V ++ G S C L + G +++WG YG LG
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGL 176
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--------GAITNFGHLYMWG 313
G + TL V+SL P F A++ G ++ WG
Sbjct: 177 GTTGKKVPTATL----------------VKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG 220
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
KN +GQLGL ++ + +P ++
Sbjct: 221 KNTFGQLGLNDLDSRCYPTQL 241
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ ++ A G +HT+++T + +T GNN GQ G + + ++ I+ LE
Sbjct: 35 AANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQF----ISALENYI 90
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKL 183
+ CG H+L LT G+++S WG++ LGH + + P +++ I + +V++
Sbjct: 91 VTQVSCGLSHSLALTNWGQLFS--WGSNATGQLGHDLDMVSYPAPRMIKS-IATKTVVQI 147
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S LA+++ G++F WG +EYGQ + + ++ T ++ G+ I +A GG+
Sbjct: 148 SCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIP-IAFIACGGNH 206
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
++ G ++ WG +G LG SR L G V + G
Sbjct: 207 SFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG---------VRYISCGDD 257
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G +GQLG GT ++ P V
Sbjct: 258 FSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV 293
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVRI 59
+ ACG T++ TK KL+ CG N QLG HD P K+ + + +++
Sbjct: 38 VQQAACGGSHTLLLTKDG----KLYTCGNNDHGQLG-HDTNNLPNKRPQFISALENYI-- 90
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ ++ G +H++ +T+ F++G+N+ GQ G + D I
Sbjct: 91 ----------VTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL----DMVSYPAPRMI 136
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ + ++ CG H L LT SG++++ G GQ GLG + + + G
Sbjct: 137 KSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIP 196
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-------QISTPRVLSQCKGVSRI 232
I ++ + AVS G +FGWG + +GQ+ +++ Q+ T R L GV I
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSL----GVRYI 252
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ G L EG V++ G G GQ
Sbjct: 253 ---SCGDDFSVFLTQEGGVFTCGLGTFGQ 278
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 195 IPIAFIACGGNHSFAVSKSG----AIFGWGKNTFGQLGLNDLDSRCYPTQL--KTLR--- 245
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +++++ G ++ +T G FT G +FGQ G G + + + +
Sbjct: 246 -----SLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT-----HGNEILPRMVFE 295
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G KI CG+ HTL F+ GKVY G G GQ G+G + TP +VRG
Sbjct: 296 LMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVRG 348
>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 32/288 (11%)
Query: 57 VRIPLPV---KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--------V 105
+ IP V KH K++A G H IT + +T+GN G+ G
Sbjct: 100 INIPTLVECLKH--LDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSR 157
Query: 106 QEEDYQGKWFCHNIADLE--GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN 163
++ +YQ + +L K+ G TL L++ G VYS G G G N
Sbjct: 158 EKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILGYETKN 217
Query: 164 NQETPCLVRGEIEG-ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPR 221
+E L +I + I+++ S D +A+ G++F WG++ +GQ+ + S I TP+
Sbjct: 218 AEE---LSFKQISNLKNIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQ 274
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
Q KG+ +I + G L+ +G++Y+WG+G GQ S+ PT
Sbjct: 275 ---QIKGLPKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQDIPT--------P 323
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
H+ + ++ + G G I+N LYM G+ + GQLG G+ + P
Sbjct: 324 HKISFDHNIDKVSCGQAHVGIISN-NKLYMHGRGKEGQLGRGSETESP 370
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 140/350 (40%), Gaps = 48/350 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI I FT S+++ L+ G N+ QLG + + +P +LV
Sbjct: 10 LKIAFIGSSITFTSSFVFSQEQ---LYAWGWNNFGQLGIGNSISQYSP-QLV-------- 57
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P + +A + + I + +T+G + FG G G V+ + C D
Sbjct: 58 ----PIQNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLD 113
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER-- 179
+ CG H +T G++Y+ WG LGH + R + E ++
Sbjct: 114 FK-----YVACGNYHMAAITRDGQLYT--WGNQDHGKLGHSFDNLAKLPSREKYEYQKNL 166
Query: 180 -------IVKLSSAVDCV-------LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ 225
+VKL+ V V L +SD G+V+ G ++ G I E + + Q
Sbjct: 167 GSAKLPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKG-ILGYETKNAEELSFKQ 225
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+ I+ + SG L+ +G +++WG GQ T PS + Q
Sbjct: 226 ISNLKNIIQIDSGTDFSVALDSDGNMFAWGSNYFGQ--------LGTPSPSVIQTPQQIK 277
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
K++ G GA++ G LY WG GQLG + +D P P K++
Sbjct: 278 GLPKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQDIPTPHKIS 327
>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
Length = 392
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 32/292 (10%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
E S + P VK S +K + G T+ + ++ + FG N GQ G G +
Sbjct: 118 EKAKSTEKTPHHVKWLS-DVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETR-- 174
Query: 111 QGKWFCHNIADLEGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
+ ++ + D V G++ +L L+E G V++ G + GQ G G
Sbjct: 175 --------VKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQ 226
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
P V E ++ +S+ AV+ GDV+GWG ++ G++ + + VL
Sbjct: 227 PVQVS---ELTDVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTNKSRNSPVL--ID 280
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPT--LIPSTLFGQH 282
G+ ++ V SG L ++G V++WG +G LG G V+ SM P + ST
Sbjct: 281 GIYDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLEST----- 335
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
P +++ ++ AG AI G ++ WG N G+LGLG + Q +P K+
Sbjct: 336 --EPLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 30/287 (10%)
Query: 56 FVRIPLPVK---HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
F + PV S HL + + + +G+ +G G G++ +G
Sbjct: 15 FASLFSPVASHAQDSFNYDHLLSADNNRTFMVKKDGSVIYGT---GSDANGVLGSSSVKG 71
Query: 113 KWFCH-NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCL 170
K + DL ++D G HT+ L + G V++ GW A G+ G + E TP
Sbjct: 72 KTTSPVPVDDLSDVLMVD--TGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHH 129
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
V+ + + ++ + + LA+ + G V+ +G + GQ+ + + V Q G++
Sbjct: 130 VKWLSD---VKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPV--QVSGLT 184
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
IV + +G L+++G V++WG G LG G + ++++P Q +
Sbjct: 185 DIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTR-EKALQPV----------QVSEL 233
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ V ++ G A+T+ G +Y WG NQ G+LG GT + + P+ +
Sbjct: 234 TDVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTNKSRNSPVLI 279
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 134 QDHTLFLTESGKV-YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
+ T + + G V Y G A+G G + + T + ++ ++ + + +A
Sbjct: 40 NNRTFMVKKDGSVIYGTGSDANGVLGSSSVKGKTTSPVPVDDLS--DVLMVDTGTSHTVA 97
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G V+ WG S YG++ +E ST + K +S + V +G + L ++G V+
Sbjct: 98 LQKDGTVWTWGWSAYGELG-NEKAKSTEKTPHHVKWLSDVKQVRAGENFTLALKEDGTVW 156
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
++G G LG G +R +KP Q + + + ++ AG A++ G +
Sbjct: 157 AFGKNRSGQLGDGTTETR-VKPV----------QVSGLTDIVAIDAGEEFSLALSEDGTV 205
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ WG N GQLG GT E P++V+
Sbjct: 206 WAWGNNSVGQLGNGTREKALQPVQVS 231
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 38/270 (14%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ---- 134
H + +T +++GN G+ G G C+ +G+K++ V
Sbjct: 202 HYMALTSEGEVYSWGNGDGGRLGHGDTN--------VCY-----KGQKVLVIVYPYHPEG 248
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVL 191
H + LT G+VYS G G G+ G G N++E P LVR G+ G +V +
Sbjct: 249 KHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSA 308
Query: 192 AVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDV--ASGGSACTMLND 247
A++ G++F WG YG++ SE Q+ TP ++ KG R++D+ SG + + D
Sbjct: 309 AITADGELFTWGRGNYGRLGHGSSEDQL-TPTLVVSLKG-RRVIDICCGSGDAQTLAVTD 366
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V+SWG YG LG+G S K I L GQ + + G A+T
Sbjct: 367 DGTVWSWGDGDYGKLGRGG--SDGCKTPKIIDRLQGQ-------DIVRVCCGAQFSLALT 417
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
GH++ WGK +LG GT E FP ++
Sbjct: 418 KTGHIWTWGKGDSQRLGHGTEEHIRFPKQL 447
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 18/255 (7%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ G +LG+ D + P + VR L K + H+ G ++ IT
Sbjct: 259 EVYSWGNGDGGRLGHGDTNSREEP-----TLVR-GLSGKQLGRHVVHIVCGSTYSAAITA 312
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG--QDHTLFLTES 143
+ FT+G ++G+ G G ED + L+G +++D CG TL +T+
Sbjct: 313 DGELFTWGRGNYGRLGHG--SSEDQLTPTL---VVSLKGRRVIDICCGSGDAQTLAVTDD 367
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G V+S G G G+ G G + +TP ++ ++G+ IV++ LA++ G ++ WG
Sbjct: 368 GTVWSWGDGDYGKLGRGGSDGCKTPKII-DRLQGQDIVRVCCGAQFSLALTKTGHIWTWG 426
Query: 204 NSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG 262
+ ++ +E I P+ L +G ++VDVA G C ++ +EG VY WG GQ
Sbjct: 427 KGDSQRLGHGTEEHIRFPKQLEGLRG-KKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQL 485
Query: 263 PKVSRSMK--PTLIP 275
S S K PTL+P
Sbjct: 486 GDSSFSTKSDPTLMP 500
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 20/268 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-GEKIMDAVCGQDHT 137
H + +T +++GN G+ G G + ++ + G ++ VCG ++
Sbjct: 250 HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPT--LVRGLSGKQLGRHVVHIVCGSTYS 307
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL--SSAVDCVLAVSD 195
+T G++++ G G G+ G G +Q TP LV ++G R++ + S LAV+D
Sbjct: 308 AAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVV-SLKGRRVIDICCGSGDAQTLAVTD 366
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ WG+ +YG++ TP+++ + +G IV V G L G +++W
Sbjct: 367 DGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQG-QDIVRVCCGAQFSLALTKTGHIWTW 425
Query: 255 GYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G + + P L G KV + G +T G +Y
Sbjct: 426 GKGDSQRLGHGTE-----EHIRFPKQLEGLR----GKKVVDVAVGSMHCLVMTEEGEVYG 476
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
WG+N GQLG + + P + + G+
Sbjct: 477 WGRNDQGQLGDSSFSTKSDPTLMPLDGK 504
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 38/226 (16%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ C + + LT++G+VY C + ++ Q P L+ + E ++K+++
Sbjct: 149 VLQLACAERCLIALTKTGRVYMCFYSSESQG----------PQLMESLADKE-VLKVAAH 197
Query: 187 VD--CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV---ASGGSA 241
+ +A++ +G+V+ WGN + G++ + + KG +V V G
Sbjct: 198 PEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCY-------KGQKVLVIVYPYHPEGKH 250
Query: 242 CTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLI---PSTLFGQHQFNPKSKVESLIA 295
L EG VYSWG G LG G SR +PTL+ G+H V ++
Sbjct: 251 YMALTSEGEVYSWGNGDGGRLGHGDTNSRE-EPTLVRGLSGKQLGRH-------VVHIVC 302
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G AIT G L+ WG+ YG+LG G+ EDQ P L V++ G++
Sbjct: 303 GSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRR 348
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + G ++ +T +T+G + G G EE + F + L G+K++D
Sbjct: 403 IVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGT--EEHIR---FPKQLEGLRGKKVVD 457
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H L +TE G+VY G GQ G + + P L+ ++G+ I S + C
Sbjct: 458 VAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLM--PLDGKSI----SGIAC 511
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
A S F W ++ + + + P V+ C G + +D
Sbjct: 512 GPAQS-----FCWTSTGHWSVG-----LRVPFVVDVCHGTFQHLD 546
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 34/342 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+A G TV+ + + ++ G N + Q G ++ G R+P+
Sbjct: 265 EVVDVAAGNEHTVLLCSTGE----VYTAGYNDNGQCGQGTTQRVG-------VLTRVPID 313
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ Q+ H G HT+V+ D+ +FG N GQ G+G E + L
Sbjct: 314 GGRKAVQV-HAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKP-----VRGL 367
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G ++ A C H++ ++G+VY+ G GQ G G + +++ PCLV + G+RI
Sbjct: 368 NGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVES-LRGQRITT 426
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGS 240
L+ + + + V G ++YGQ+ +E Q V + G +++ V G
Sbjct: 427 LACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFVAVKGKLDG-AQVRHVRCGYY 485
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L E V+ +G YG LG G R PT+I + + V + AG
Sbjct: 486 HTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTII--------EGAQEKHVYRISAGC 537
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLKVAVG 337
I G L+++G+N +GQLG G ++ PFP+ +G
Sbjct: 538 YHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLG 579
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 143/321 (44%), Gaps = 31/321 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CG NS +LG+ D + LV F ++ +A G HT+++
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHC-LVKPF---------EGREVVDVAAGNEHTVLLCS 281
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD--AVCGQDHTLFLTES 143
+T G N GQCG+G Q + + G K + A G +HTL + +
Sbjct: 282 TGEVYTAGYNDNGQCGQGTTQRVGVLTR-----VPIDGGRKAVQVHAYNGCEHTLVVLDD 336
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G++ S G+ GQ G G+ +++ P VRG + G R+ + S + + D G+V+ +G
Sbjct: 337 GQMMSFGYNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYHSVIACDNGEVYTFG 395
Query: 204 NSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+++GQ+ + + P ++ +G RI +A G + E V S G YG L
Sbjct: 396 RNDFGQLGSGDVIDRKLPCLVESLRG-QRITTLACGQYHTVVSTLEIGVQSCGKNDYGQL 454
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G S+ K + L G ++V + G +T H++ +G+N YGQ
Sbjct: 455 GLESTESQR-KFVAVKGKLDG-------AQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQ 506
Query: 320 LGLGTVEDQPFPLKVAVGGQK 340
LGLG + F + G Q+
Sbjct: 507 LGLGHTTQRVFGPTIIEGAQE 527
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++T +C Y +V+A N +++ G N QLG D + P LV S
Sbjct: 370 IRVTQASCSYYHSVIACD----NGEVYTFGRNDFGQLGSGDVIDRKLPC-LVESLR---- 420
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+I LA G+ HT+V T G + G N +GQ G ++ + Q K F
Sbjct: 421 -----GQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLG---LESTESQRK-FVAVKGK 471
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERI 180
L+G ++ CG HT+ LT V+ G GQ GLGH + P ++ G E + +
Sbjct: 472 LDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQE-KHV 530
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASG 238
++S+ + + G +F +G + +GQ+ + + +P +S G RI VA+G
Sbjct: 531 YRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLG-KRIAKVAAG 588
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 37/266 (13%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLG---SKSAVSKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T V +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC--------KGVSRIVDVASGGSACT 243
A+++ G +F WG++ SE QI P +L+ C K VS I + G
Sbjct: 154 ALTEDGRLFMWGDN-------SEGQIGLPNILNACVPHQVTIGKPVSWI---SCGYYHSA 203
Query: 244 MLNDEGLVYSWGYGLLGQ----GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ +G +Y +G G+ +S P L+P P+ ++ G
Sbjct: 204 FVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEI--------PEKVIQVACGG--E 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTV 325
+ +Y +G Q+GQLGLGT+
Sbjct: 254 HSVVLTEDAVYTFGLGQFGQLGLGTL 279
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 145/323 (44%), Gaps = 38/323 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYVFGSNNWGQLGLGSKSAVSKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N GQ G G D + + H ++ +
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLG-----DTEERTTFHRVSFFTSQH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL ++ N C+ G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILN---ACVPHQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ G+++ +G SE G++ +S R+ + +++ VA GG +
Sbjct: 198 GYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKVIQVACGGEHSVV 257
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPCTF 300
L ++ VY++G +G LG G + + +P ++ N +K S I+ G
Sbjct: 258 LTEDA-VYTFGLGQFGQLGLGTLLFETSEPKVVE---------NIGNKTISYISCGENHA 307
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
+T+ G +Y +G ++G+LGLG
Sbjct: 308 ALLTDNGLMYTFGDGRHGKLGLG 330
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P EL +S RIP V
Sbjct: 195 ISCGYYHSAFVTT--DGELYIFGESENG----------KLGLPNEL-LSNHRIPQLVPEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G H++V+T++ +TFG FGQ G G + E + K NI G K
Sbjct: 242 PEKVIQVACGGEHSVVLTED-AVYTFGLGQFGQLGLGTLLFETSEPK-VVENI----GNK 295
Query: 127 IMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
+ + CG++H LT++G +Y+ G G G+ GLG + NQ TP L
Sbjct: 296 TISYISCGENHAALLTDNGLMYTFGDGRHGKLGLGLENFTNQFTPTL 342
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ +S P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNDEGQLGLGDTEERT--------TFHRVSFFTSQHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL + + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTIG 189
>gi|340054463|emb|CCC48760.1| putative regulator of chromosome condensation [Trypanosoma vivax
Y486]
Length = 1182
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 36/303 (11%)
Query: 30 CGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGA 89
C + S S L H+P NP + R P+ ++ ++ G+ T+++T+N A
Sbjct: 720 CLMRSVSVLATHNP----NPFPRKDN--RCPMDEIVAQHGVRMVSGGKGFTVLLTENNQA 773
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ G GQ G G V E I+ + + ++ CG + + ++ G VYS
Sbjct: 774 YAAGQAGMGQLGLGSVTAEHVSS---FAEISLPKEDGVVTVSCGHNFVIAISTLGTVYSW 830
Query: 150 GWGADGQTGLGHL----NNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
G + GQ GLG +P + ++IV+++ +A+S G V+ WG +
Sbjct: 831 GSNSHGQLGLGDAVPVGECASSPQEIEAFNSTKQIVQVACGGTFAIALSLDGKVYSWGEA 890
Query: 206 EYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPK 264
Y +E P V+S + I+ VASG L+ ++++WG G LG G
Sbjct: 891 RYCSRGSAEKNCFPMPEVVSS---LENIICVASGAEHAVALSSNNVLHAWGRGPLGDGGA 947
Query: 265 VSR-SMKPTLI----PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
S + P ++ P G +FN TF AITN G L++WG N+ GQ
Sbjct: 948 ASDFAASPVVVTFAPPIRQIGCGEFN-------------TF-AITNIGDLFVWGSNENGQ 993
Query: 320 LGL 322
G+
Sbjct: 994 CGV 996
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 101/264 (38%), Gaps = 38/264 (14%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + + G H++V+T F FG N GQ G + G F A +
Sbjct: 606 IVNASCGNYHSVVLTREGDIFAFGENKCGQLGLPTASPRLFPGHVFLPKPA-------VA 658
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG++HT L E G V CG LG+ N P R ++ + L+S
Sbjct: 659 LSCGREHTCLLLEDGDVMVCGSLQSSGMELGYGNRFTIP---RRTMQSYIALSLAS---- 711
Query: 190 VLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRI----VDVASGGSACT 243
G++ G +S + PR ++C + V + SGG T
Sbjct: 712 -------GEMHGMATCLMRSVSVLATHNPNPFPRKDNRCPMDEIVAQHGVRMVSGGKGFT 764
Query: 244 -MLNDEGLVYS---WGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L + Y+ G G LG G + + + F + + V ++ G
Sbjct: 765 VLLTENNQAYAAGQAGMGQLGLGSVTAEHV-------SSFAEISLPKEDGVVTVSCGHNF 817
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
AI+ G +Y WG N +GQLGLG
Sbjct: 818 VIAISTLGTVYSWGSNSHGQLGLG 841
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG------------ER 179
CG FLT VYSCG GQ G+G + ++ P E + ++
Sbjct: 379 CGSFSCYFLTLDNGVYSCGNNDFGQLGIG-VRSKSDPTAGSNEKDSRSGLHRVYFPSDDK 437
Query: 180 IVKLSSAVDCVLAVSDKG-DVFGWGNSEYGQ-ISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +L + +A++ G ++ WG + GQ +S + + P ++ I+ A
Sbjct: 438 VCRLEAGSSFAIALTTGGKSMYVWGQNAVGQCLSSTSSIVKAPELIDVSDRGGTIMSGAC 497
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVS-RSMKPTLIPSTLFGQHQFN---PKS-KVES 292
G S ++ G + +WG L G +S ++ P FN P S ++ +
Sbjct: 498 GQSFAALVFSCGSICTWG-SLKMLGVTISPEGIRDVDAPDDYKCSKSFNVFKPISERIVA 556
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
L AG AIT+ G +Y WG + G+LGLG V
Sbjct: 557 LRAGEWHCLAITSRGSVYSWGVDHCGRLGLGEV 589
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 120/302 (39%), Gaps = 37/302 (12%)
Query: 52 LVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED-- 109
+S V++ PV P I+ G +T + G ++ GNN FGQ G G+ + D
Sbjct: 361 FALSHVKLFTPV--PVVTIR---CGSFSCYFLTLDNGVYSCGNNDFGQLGIGVRSKSDPT 415
Query: 110 -----YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK-VYSCGWGADGQTGLGHLN 163
+ H + +K+ G + LT GK +Y G A GQ +
Sbjct: 416 AGSNEKDSRSGLHRVYFPSDDKVCRLEAGSSFAIALTTGGKSMYVWGQNAVGQCLSSTSS 475
Query: 164 NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTP 220
+ P L+ G I+ + V G + WG+ + ++ E + P
Sbjct: 476 IVKAPELIDVSDRGGTIMSGACGQSFAALVFSCGSICTWGSLKMLGVTISPEGIRDVDAP 535
Query: 221 ------RVLSQCKGVS-RIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMK 270
+ + K +S RIV + +G C + G VYSWG G LG G +V K
Sbjct: 536 DDYKCSKSFNVFKPISERIVALRAGEWHCLAITSRGSVYSWGVDHCGRLGLG-EVGYVEK 594
Query: 271 PTLIPSTLFGQHQFNPKS-KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
I + L G N S++ +T G ++ +G+N+ GQLGL T +
Sbjct: 595 MRRIEA-LDGHFIVNASCGNYHSVV--------LTREGDIFAFGENKCGQLGLPTASPRL 645
Query: 330 FP 331
FP
Sbjct: 646 FP 647
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 23/258 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G HT+++T N + FG+N++GQ G ++ K C + L+ EK++ A
Sbjct: 41 HISCGDEHTVLVTGNGKLYVFGSNNWGQLG---LEAGSAISKPTC--VKALKSEKVVFAS 95
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE GK+YS G ++GQ GLG + + + + +I +LS+ +
Sbjct: 96 CGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G +F WG++ GQ+ E E STP+ + K +S I + G + +G
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI---SCGYYHSAFVTQDGE 212
Query: 251 VYSWGY---GLLG-QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+Y++G G LG K+ + KP + S L G KV+ + G A+T
Sbjct: 213 LYTFGEPENGKLGLPSDKLKKHKKPQRV-SGLSG--------KVKIVSCGGEHTIAVTE- 262
Query: 307 GHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLG GT
Sbjct: 263 KEVYTFGLGQFGQLGHGT 280
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 36/326 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K I+CG TV+ T N KL+ G N+ QLG S + P
Sbjct: 38 KPAHISCGDEHTVLVTG----NGKLYVFGSNNWGQLGLE-----------AGSAISKPTC 82
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
VK S ++ + GR HT++ T+ ++ G NS GQ G G D G+ I+
Sbjct: 83 VKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLG-----DTSGRTSFQEISF 137
Query: 122 LEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ KI G + + LT GK++ G ++GQ GL TP + +I G+ I
Sbjct: 138 FNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKI--DI-GKPI 194
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+S V+ G+++ +G E G++ ++ + + G+S V + S G
Sbjct: 195 SWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGG 254
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+ E VY++G +G LG G + + P + K + + G
Sbjct: 255 EHTIAVTEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLT--------KKTILYVTCGE 306
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G LY +G ++G+LGLG
Sbjct: 307 NHTAVITDKGLLYTFGDGRHGKLGLG 332
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T+ + L+ G + +LG + K + + P V
Sbjct: 194 ISWISCGYYHSAFVTQDGE----LYTFGEPENGKLGLPSDKLKKH---------KKPQRV 240
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S ++K ++ G HTI +T+ E +TFG FGQ G G E K + L
Sbjct: 241 SGLSGKVKIVSCGGEHTIAVTEKE-VYTFGLGQFGQLGHGTFIFETQLPKA----VDVLT 295
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+ I+ CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 296 KKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPIL 344
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++ ++ +S + + V+ G ++ +G++ +GQ+ E+ IS P + K ++V
Sbjct: 34 LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKS-EKVV 92
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ G + + ++G +YS G G LG G R T F FN + K+
Sbjct: 93 FASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGR----TSFQEISF----FNTQYKI 144
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ L AG T A+T G L+MWG N GQLGL P K+ +G
Sbjct: 145 KQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIG 191
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ D+ FTFG + F E+ K++ L+ +K CG +HT+ +T
Sbjct: 10 VPDSGALFTFGKSKFA---------ENIPSKFW------LKNDKPAHISCGDEHTVLVTG 54
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
+GK+Y G GQ GL + P V+ ++ E++V S + L +++G ++
Sbjct: 55 NGKLYVFGSNNWGQLGLEAGSAISKPTCVKA-LKSEKVVFASCGRNHTLLYTEQGKLYSS 113
Query: 203 GNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ + T + +S +I +++G + L +G ++ WG GQ
Sbjct: 114 GGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQ 173
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++ I ST + + + + G +T G LY +G+ + G+LG
Sbjct: 174 -----LGLEKEAIYST---PQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG 225
Query: 322 L 322
L
Sbjct: 226 L 226
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 25/254 (9%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
G ++ G G RGIV E C ++D + + CG DH +FL E G+VY
Sbjct: 5 GYWSLGQPGIGTHLRGIVAEPQA-----CGFVSD---RSVKEVACGGDHCVFLLEDGEVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 57 TCGLNTKGQ--LGHEREGNQPEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ P + S + P ++V AG A++ G ++ WG N GQLGL
Sbjct: 173 KEFPSQTSPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 323 GTVEDQPFPLKVAV 336
+D+ P V +
Sbjct: 225 SDEKDRESPCHVKL 238
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGDHCVFLLEDGE----VYTCGLNTKGQLGH---EREGNQPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDQGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 36/258 (13%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +G+ G+ G G +++E+ + + +E + CG+++T+ +T+ GKVYSC
Sbjct: 2 FCWGSTIHGELGLGGIEDENI---FMPREVDFIEASNVEQIACGENYTVAITKEGKVYSC 58
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ LGH ++ L+ G ++ K++ LAV++ G +F WG + GQ
Sbjct: 59 GNNDYGQ--LGHEKARKRLQLIPG-LDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115
Query: 210 ISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPK 264
+ + + + PR++ + G + IV +A G L ++G +Y+WG G LG G
Sbjct: 116 LGLNSVDCTERVPRMI-KVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSY 174
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA--------ITNFGHLYMWGKNQ 316
+ +KP ++ +L A P F A I+ G ++ WG+N
Sbjct: 175 TTTEIKP----------------KRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNT 218
Query: 317 YGQLGLGTVEDQPFPLKV 334
+GQLGL V+ + P ++
Sbjct: 219 FGQLGLNDVQQRNLPCQL 236
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 21/222 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IACG ++ T + L+ G N + QLG + + + +P
Sbjct: 139 IVQIACGTEHSIALTNDGE----LYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVP--- 191
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I +A G HTIVI+ + F++G N+FGQ G VQ+ + + + L
Sbjct: 192 ------IAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQ-----LRTLR 240
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
K+ A CG++ ++FLT G V++CG G GQ G G+ N+ P V E+ G + ++
Sbjct: 241 NAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVM-ELMGSTVTQI 299
Query: 184 SSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVL 223
S LA V +G V+ WG GQ+ + + +TP+V+
Sbjct: 300 SCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 139/330 (42%), Gaps = 49/330 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG +TV TK K++ CG N QLG+ RK+ + + +FV
Sbjct: 36 VEQIACGENYTVAITKEG----KVYSCGNNDYGQLGHEKARKRLQLIPGLDAFV------ 85
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +A G HT+ + + F++G N GQ G V + + I L
Sbjct: 86 ------FRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRM----IKVLG 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
I+ CG +H++ LT G++Y+ G +GQ GLG EI+ +RI L
Sbjct: 136 TNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTT--------EIKPKRISTL 187
Query: 184 SSA----VDC----VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
++ + C + +S G VF WG + +GQ+ +++Q + +++
Sbjct: 188 AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYA 247
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G L +G V++ G YG LG G + + ++ L G S V
Sbjct: 248 TCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVME--LMG-------STVTQ 298
Query: 293 LIAGP-CTFGAITNFGHLYMWGKNQYGQLG 321
+ G T + + G +Y WG GQLG
Sbjct: 299 ISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 24/274 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ ++ +A G +T+ IT ++ GNN +GQ G + + I L+
Sbjct: 33 ASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHE-------KARKRLQLIPGLDAFV 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
CG HTL + E G+++S G +GQ GL ++ E + + IV+++
Sbjct: 86 FRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ +A+++ G+++ WG++ GQ+ S + +I P+ +S V I +A GG
Sbjct: 146 TEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIK-PKRISTLAAVP-IAFIACGGYHTI 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+++ G V+SWG +G LG R++ L TL +KV G
Sbjct: 204 VISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQL--RTL-------RNAKVCYATCGEEFS 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G ++ P +V
Sbjct: 255 VFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQV 288
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I IACG T+V +KS +F G N+ QLG +D +++ P +L +R
Sbjct: 190 VPIAFIACGGYHTIVISKSG----AVFSWGRNTFGQLGLNDVQQRNLPCQL--RTLR--- 240
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++ + G ++ +T + G FT G +GQ G G E + +
Sbjct: 241 -----NAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNE-----ILPRQVME 290
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLV 171
L G + CG+ HTL L S G+VY+ G G GQ G + TP +V
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 23/258 (8%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G HT+++T N + FG+N++GQ G ++ K C + L+ EK++ A
Sbjct: 41 HISCGDEHTVLVTGNGKLYVFGSNNWGQLG---LEAGSAISKPTC--VKALKSEKVVFAS 95
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE GK+YS G ++GQ GLG + + + + +I +LS+ +
Sbjct: 96 CGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A++ G +F WG++ GQ+ E E STP+ + K +S I + G + +G
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI---SCGYYHSAFVTQDGE 212
Query: 251 VYSWGY---GLLG-QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+Y++G G LG K+ + KP + S L G KV+ + G A+T
Sbjct: 213 LYTFGEPENGKLGLPSDKLKKHKKPQRV-SGLSG--------KVKIVSCGGEHTIAVTE- 262
Query: 307 GHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLG GT
Sbjct: 263 KEVYTFGLGQFGQLGHGT 280
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 138/322 (42%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH- 65
I+CG TV+ T N KL+ G N+ QLG S + P VK
Sbjct: 42 ISCGDEHTVLVTG----NGKLYVFGSNNWGQLGLE-----------AGSAISKPTCVKAL 86
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
S ++ + GR HT++ T+ ++ G NS GQ G G D G+ I+ +
Sbjct: 87 KSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLG-----DTSGRTSFQEISFFNTQ 141
Query: 126 -KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
KI G + + LT GK++ G ++GQ GL TP + +I G+ I +S
Sbjct: 142 YKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKI--DI-GKPISWIS 198
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
V+ G+++ +G E G++ ++ + + G+S V + S G T+
Sbjct: 199 CGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTI 258
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
E VY++G +G LG G + + P + K + + G
Sbjct: 259 AVTEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLT--------KKTILYVTCGENHTA 310
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
IT+ G LY +G ++G+LGLG
Sbjct: 311 VITDKGLLYTFGDGRHGKLGLG 332
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T+ + L+ G + +LG + K + + P V
Sbjct: 194 ISWISCGYYHSAFVTQDGE----LYTFGEPENGKLGLPSDKLKKH---------KKPQRV 240
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S ++K ++ G HTI +T+ E +TFG FGQ G G E K + L
Sbjct: 241 SGLSGKVKIVSCGGEHTIAVTEKE-VYTFGLGQFGQLGHGTFIFETQLPKA----VDVLT 295
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+ I+ CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 296 KKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPIL 344
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++ +R +S + + V+ G ++ +G++ +GQ+ E+ IS P + K ++V
Sbjct: 34 LKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKS-EKVV 92
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ G + + ++G +YS G G LG G R T F FN + K+
Sbjct: 93 FASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGR----TSFQEISF----FNTQYKI 144
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ L AG T A+T G L+MWG N GQLGL P K+ +G
Sbjct: 145 KQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIG 191
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ D+ FTFG + F E+ K++ L+ ++ CG +HT+ +T
Sbjct: 10 VPDSGALFTFGKSKFA---------ENIPSKFW------LKNDRPAHISCGDEHTVLVTG 54
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
+GK+Y G GQ GL + P V+ ++ E++V S + L +++G ++
Sbjct: 55 NGKLYVFGSNNWGQLGLEAGSAISKPTCVKA-LKSEKVVFASCGRNHTLLYTEQGKLYSS 113
Query: 203 GNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ + T + +S +I +++G + L +G ++ WG GQ
Sbjct: 114 GGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQ 173
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++ I ST + + + + G +T G LY +G+ + G+LG
Sbjct: 174 -----LGLEKEAIYST---PQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG 225
Query: 322 L 322
L
Sbjct: 226 L 226
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI + + P+ ++ VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT-----FHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGNPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGN 190
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP-- 60
KI ++ G + T+ +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTEDG----RLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ + +P + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VTIGNP---VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP 242
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 ----EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTI 297
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 298 SYISCGENHTALITDIGLMYTFGDGRHGKL 327
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 42/350 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+IT I+ G +A S+D KL+ CG N+ QLG+ P LV +
Sbjct: 124 IRITHISSANGCENLAIISQDG--KLYTCGYNNYGQLGHGTQSNLSTPT-LVQAL----- 175
Query: 62 PVKHPSTQIKHLATGRAHTIVITDN--------EGAFTFGNNSFGQCGRGIVQEEDYQGK 113
TQ+ +++ H++++T + ++ G N GQ G+ +
Sbjct: 176 ----KDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQ----------E 221
Query: 114 WFCHNIA-----DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
CH I L +++ CG H++F+T G+V+SCG+ +GQ G ++ P
Sbjct: 222 HTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQP 281
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQC 226
L+ ++ + IV+ + L D G+++ +G ++ GQ I + + P+ + +
Sbjct: 282 VLIES-LKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEF 340
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
VS I SGG+ + + + LG+ + + + + + Q Q+
Sbjct: 341 LTVSNIQH--SGGNQNQLHSGQEHNQPSSQS-LGESGAIMQGLAESNNLNNQQPQVQYLS 397
Query: 287 KSKVESLIAGPCTFG-AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
K S IA C A+ G L+ +G+ +GQLG G EDQ P +VA
Sbjct: 398 KKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVA 447
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 46/315 (14%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F G NS +LG D +++ P S VR + +A G H V+T N
Sbjct: 41 VFVFGQNSYGELGLGDVQERSIP-----SQVRF-----FDEMNVTQIAAGNEHIAVLTRN 90
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI--MDAVCGQDHTLFLTESG 144
T G N GQ G G + K I L+ +I + + G ++ +++ G
Sbjct: 91 GDVLTVGFNGSGQLGHGNNKSISTPKK-----IESLKNIRITHISSANGCENLAIISQDG 145
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV--------DCVLAVSDK 196
K+Y+CG+ GQ G G +N TP LV+ ++ ++ +S + D A + +
Sbjct: 146 KLYTCGYNNYGQLGHGTQSNLSTPTLVQA-LKDTQVTNVSCSYYHSLIVTQDMRQASNQQ 204
Query: 197 GDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
V+ G ++ GQ+ E TP+++ +++ A G + G V+S G
Sbjct: 205 TTVYSVGRNDNGQLGQEHTCHEITPKIIRSL-NTRQVIQTACGLHHSVFVTVHGEVFSCG 263
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI---TNFGHL 309
+ G LG SR+ +P LI S K + ++ C + + G +
Sbjct: 264 FNDNGQLGHNDTKSRN-QPVLIESL-----------KNKFIVQAACGYYHTLVRRDTGEI 311
Query: 310 YMWGKNQYGQLGLGT 324
Y +G+N GQLG+ T
Sbjct: 312 YAFGRNDKGQLGIET 326
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 29/271 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD---LEGEKIMD 129
++ G H I +T++ T G + +GQ G G D G N+ D G K +
Sbjct: 277 ISLGEYHAIALTNDGRVVTLGRDDYGQLGDG---PGDSSGTHTAPNLRDNILPAGIKAVA 333
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGEIEGERIVKLSSAVD 188
G+ H+L LT G VY+ G GQ GLG + QE+P L+ G + ++ L++ D
Sbjct: 334 VQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSD---VIALAAGDD 390
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA+ G V+ WG++ G++ ++ S P +S GV I A+GG+ L
Sbjct: 391 HTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVKAI---AAGGNHSVALLA 447
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V +WGY G LG G + ++ +P T + V + AG A+
Sbjct: 448 DGTVRTWGYNNHGQLGNGSNTNSNVP---VPVTGL--------TDVVGIAAGYEFTLAVL 496
Query: 305 NFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
+ G + WG + QLG G T DQ P+ V
Sbjct: 497 SNGSVKAWGHDDSFQLGNGATTGDQTTPVDV 527
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 29/263 (11%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A GR H++ +T + +G N GQ G G + + ++D +
Sbjct: 329 IKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQ-ESPALIPGLSD-----V 382
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G DHTL L G V++ G +G+ G G + P V + G + +++
Sbjct: 383 IALAAGDDHTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAVS-NLPGVK--AIAAGG 439
Query: 188 DCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ +A+ G V WG + +GQ+ S + + P G++ +V +A+G
Sbjct: 440 NHSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVP-----VTGLTDVVGIAAGYEFTLA 494
Query: 245 LNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ G V +WG+ LG G P + G+ V L AG
Sbjct: 495 VLSNGSVKAWGHDDSFQLGNGATTGDQTTPVDVQGIPTGR-------SVRGLTAGIFHAL 547
Query: 302 AITNFGHLYMWGKNQYGQLGLGT 324
A+ + G + WG N GQLG GT
Sbjct: 548 ALLDDGSMVAWGSNVQGQLGDGT 570
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 24/145 (16%)
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A+ G V+ WG++ YGQ+ + S TP +Q ++ V ++ G L ++G
Sbjct: 235 AIKPNGQVWSWGDNTYGQLGRATTSPSDSTP---TQASLINDAVSISLGEYHAIALTNDG 291
Query: 250 LVYSWG---YGLLGQGP------KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
V + G YG LG GP + +++ ++P+ + K ++ AG
Sbjct: 292 RVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGI----------KAVAVQAGRYHS 341
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTV 325
A+T+ G +Y WG+N GQLGLGT+
Sbjct: 342 LALTSEGTVYAWGRNDVGQLGLGTI 366
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + + T+G N+ GQ G G + + D+ G
Sbjct: 432 VKAIAAGGNHSVALLADGTVRTWGYNNHGQLGNG--SNTNSNVPVPVTGLTDVVG----- 484
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSA 186
G + TL + +G V + WG D LG+ +Q TP V+G G + L++
Sbjct: 485 IAAGYEFTLAVLSNGSVKA--WGHDDSFQLGNGATTGDQTTPVDVQGIPTGRSVRGLTAG 542
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
+ LA+ D G + WG++ GQ+ + TP K VS
Sbjct: 543 IFHALALLDDGSMVAWGSNVQGQLGD-----GTPNSSDTAKPVS 581
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 144/320 (45%), Gaps = 34/320 (10%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVIT 84
+LF G N LG H P K P VK + +I A G H + +
Sbjct: 60 QLFTWGWNQRGTLG-HPPESKTE---------STPTQVKALENVKIVQAAIGGWHCLAVD 109
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG----EKIMDAVCGQDHTLFL 140
D A+ +G N +GQCG ++ED K +IA + ++ G H++ L
Sbjct: 110 DQGQAYAWGGNEYGQCGEEPERKEDGS-KVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVL 168
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T +G V++ WG G + TP V+G +E +++ + + + LA+ ++G+V+
Sbjct: 169 THNGHVWT--WGQPWPPG--DIKQISTPVRVQG-LENVQLIAVGAFHN--LALLEEGEVW 221
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WGN+EYGQ+ + Q + V Q + D+A+GG T L + VY+WG +G
Sbjct: 222 AWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHG 281
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G S M P + L G+ + + G A T G ++ +G+ +
Sbjct: 282 RLGFGDDKSSKMVPQKV-HLLAGE-------TIAQVSCGGTHSVARTADGRIFSYGRADH 333
Query: 318 GQLGLGTVEDQPFPLKVAVG 337
G+LG G P++V +G
Sbjct: 334 GRLGYGRKVTTGHPMEVPIG 353
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL--EGEKIMDAVCGQDHTLFL 140
+ + +G+ GQ G G ++++D W C +I L G++++ V G ++L +
Sbjct: 1 MESDHAVLAWGSGEDGQLGVGNMEDKD----WVC-SIQALASHGKRVVSVVAGSRNSLAI 55
Query: 141 TESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
E G++++ GW G LGH + TP V+ +E +IV+ + LAV D+G
Sbjct: 56 CEDGQLFTWGWNQRGT--LGHPPESKTESTPTQVKA-LENVKIVQAAIGGWHCLAVDDQG 112
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEG 249
+ WG +EYGQ E E + +VL +C R+ VA+GG+ +L G
Sbjct: 113 QAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNG 172
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
V++WG P +K P + G V+ + G A+ G +
Sbjct: 173 HVWTWGQ------PWPPGDIKQISTPVRVQG------LENVQLIAVGAFHNLALLEEGEV 220
Query: 310 YMWGKNQYGQLGLGTVE--DQPFPLK 333
+ WG N+YGQLG G + QP P++
Sbjct: 221 WAWGNNEYGQLGTGDTQPRSQPVPVQ 246
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 25/276 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S+ ++ A G +HT+++T + F+ GNN GQ G + + ++ I+ LE
Sbjct: 35 SSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQF----ISSLENYI 90
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKL 183
+ CG H+L LT G+V+S WG++ LGH L TP +++ I + +V++
Sbjct: 91 VTHVSCGTTHSLALTNWGQVFS--WGSNSIGQLGHDTDLQTYTTPRMIKT-IATKTVVQI 147
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+S LA+++ G++F WG + YGQ + + ++ TP ++ G+ I +A GG+
Sbjct: 148 ASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIP-IAFIACGGNH 206
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
++ G ++ WG +G LG VSR L G V + G
Sbjct: 207 SFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLG---------VRYISCGDD 257
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G +GQLG GT ++ P V
Sbjct: 258 FSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMV 293
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 124/266 (46%), Gaps = 41/266 (15%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVRIPLPV 63
ACG T++ TK KLF CG N QLG HD P K+ + + +++
Sbjct: 42 ACGTSHTLLLTKDG----KLFSCGNNDHGQLG-HDTDCLPNKRPQFISSLENYI------ 90
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ H++ G H++ +T+ F++G+NS GQ G + D Q I +
Sbjct: 91 ------VTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG----HDTDLQTYTTPRMIKTIA 140
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVK 182
+ ++ GQ H+L LT SG+++S G GQ GLG + TP LV+ + G I
Sbjct: 141 TKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKS-LAGIPIAF 199
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-------QISTPRVLSQCKGVSRIVDV 235
++ + AVS G +FGWG + +GQ+ +++ Q+ T R L GV I
Sbjct: 200 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNL----GVRYI--- 252
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ G L EG V++ G G GQ
Sbjct: 253 SCGDDFSAFLTQEGGVFTCGAGTFGQ 278
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 195 IPIAFIACGGNHSFAVSKSG----AIFGWGKNTFGQLGLNDLVSRCFPQQL--KTLR--- 245
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +++++ G + +T G FT G +FGQ G G E F +
Sbjct: 246 -----NLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVF-----E 295
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G KI CG+ HTL F+ GK+Y G G GQ G+G ++N TP +VRG
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVISNYNTPQIVRG 348
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G H++ +TD F +G NS GQ G G +D + H L +
Sbjct: 130 VVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLPRQVTGH----LLNRFVRS 185
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
VCGQ+ T+ LT+ G+V++ G+ +GQ G G+L+NQ +P LV G + I +++
Sbjct: 186 VVCGQNSTMALTDGGEVFAWGFNGNGQLGAGNLSNQHSPALVIG-LHNVVIEQIACGFAH 244
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM---LN 246
LA++D+G +F WG++ GQ+ + + + + + RI++VA+ AC + +N
Sbjct: 245 SLALTDEGQLFAWGSNTCGQLCANLPRSNQTSPVLVASALGRIIEVAA-VHACNITVAVN 303
Query: 247 DEGLVYSWG 255
G VY WG
Sbjct: 304 QSGKVYMWG 312
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 110/248 (44%), Gaps = 19/248 (7%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DH 136
+ I++T + G NS G QG I L G I+ G H
Sbjct: 32 SEAILVTKEGELYAIGTNSCSCLG-----TNRSQGTLEPSRIDTLSGRAIVSLAYGSGPH 86
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
L L+++G+V+S G A GQ GLG P LV + G +V+++ +AV+D+
Sbjct: 87 VLALSQNGEVFSWGHNAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTDR 146
Query: 197 GDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G++F WG + GQ+ S + PR ++ + V G ++ L D G V++WG
Sbjct: 147 GEIFAWGRNSCGQVGIGSNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTDGGEVFAWG 206
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
+ G LG G +S P L+ G H +E + G A+T+ G L+ W
Sbjct: 207 FNGNGQLGAG-NLSNQHSPALV----IGLHNV----VIEQIACGFAHSLALTDEGQLFAW 257
Query: 313 GKNQYGQL 320
G N GQL
Sbjct: 258 GSNTCGQL 265
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 32/248 (12%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQ---EEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
H + ++ N F++G+N+FGQ G G G L G ++ CG
Sbjct: 86 HVLALSQNGEVFSWGHNAFGQLGLGSTTVGIAPSLVGD-------TLSGHNVVQIACGSH 138
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H++ +T+ G++++ G + GQ G+G NQ+ P V G + + + + +A++D
Sbjct: 139 HSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTD 198
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIV--DVASGGSACTMLNDEGLV 251
G+VF WG + GQ+ + Q S V+ G+ +V +A G + L DEG +
Sbjct: 199 GGEVFAWGFNGNGQLGAGNLSNQHSPALVI----GLHNVVIEQIACGFAHSLALTDEGQL 254
Query: 252 YSWGYGLLGQ----GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-AITNF 306
++WG GQ P+ S P L+ S L +E C A+
Sbjct: 255 FAWGSNTCGQLCANLPR-SNQTSPVLVASAL--------GRIIEVAAVHACNITVAVNQS 305
Query: 307 GHLYMWGK 314
G +YMWG+
Sbjct: 306 GKVYMWGQ 313
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAVSD 195
+ +T+ G++Y+ G + G P + + G IV L+ VLA+S
Sbjct: 34 AILVTKEGELYAIGTNSCSCLGTNRSQGTLEPSRI-DTLSGRAIVSLAYGSGPHVLALSQ 92
Query: 196 KGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G+VF WG++ +GQ+ + P ++ +V +A G + D G +++W
Sbjct: 93 NGEVFSWGHNAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTDRGEIFAW 152
Query: 255 GYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G GQ G V++ + P + L + V S++ G + A+T+ G ++
Sbjct: 153 GRNSCGQVGIGSNVNQDL-PRQVTGHLLNRF-------VRSVVCGQNSTMALTDGGEVFA 204
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
WG N GQLG G + +Q P V
Sbjct: 205 WGFNGNGQLGAGNLSNQHSPALV 227
>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
purpuratus]
Length = 861
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 138/320 (43%), Gaps = 34/320 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ I+CG T V T + + G + QLG D +P L +
Sbjct: 67 RVKHISCGSSHTAVVTGQDE----VLTWGNGNSGQLGCGDKATHTSPQRLRLG------- 115
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H S Q+ +A G HT+V +N A++ GNN + Q G + + + H + +
Sbjct: 116 -PHDS-QVAGVACGSRHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPI 173
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
K++ CG+ TLFL ESG+V CG GQ G G +P + E +++
Sbjct: 174 MHRKVVQVSCGEKFTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPLDNP---ENVIR 230
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSA 241
+++ LAV+ G+++ WG G+ S + TP+ + + S +V VA G
Sbjct: 231 IAAGSCHSLAVTATGELYAWG---MGRACGSRRDDLLTPQRKTTRR--SNVVGVAGGSGH 285
Query: 242 CTMLNDEGLVYSWGYGL---LGQGPKVSRSMKP-TLIPSTLFGQHQFNPKSKVESLIAGP 297
L G VYSWG G+ LG G V +P L L G +V + G
Sbjct: 286 SLALTANGTVYSWGGGVDGQLGHGEDVQYLAQPEALADGALPG--------RVAQVACGD 337
Query: 298 CTFGAITNFGHLYMWGKNQY 317
A+ G LYMWGK+ +
Sbjct: 338 SYSAALLGDGSLYMWGKSSH 357
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 28/265 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQ--CGRGIVQEEDYQGKWFCHNIADLEG 124
S ++KH++ G +HT V+T + T+GN + GQ CG + + H+
Sbjct: 65 SHRVKHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHD------ 118
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-----GHLNNQETPCLVRGEIEGER 179
++ CG HT+ E+G+ YSCG Q G + NQ P +R I +
Sbjct: 119 SQVAGVACGSRHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLR-PIMHRK 177
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+V++S L + + G V G G + +GQ+ + ++ +P+ L + V RI A+G
Sbjct: 178 VVQVSCGEKFTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPLDNPENVIRI---AAG 234
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ G +Y+WG G + S + L L Q + +S V + G
Sbjct: 235 SCHSLAVTATGELYAWGMG------RACGSRRDDL----LTPQRKTTRRSNVVGVAGGSG 284
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG GQLG G
Sbjct: 285 HSLALTANGTVYSWGGGVDGQLGHG 309
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 89/236 (37%), Gaps = 26/236 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEE-DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
++G FGQ G G E +G H + + ++ CG HT +T +V +
Sbjct: 30 LSWGCGEFGQHGHGGSGENVSSEGALVDHGDSLVRSHRVKHISCGSSHTAVVTGQDEVLT 89
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G G GQ G G +P +R ++ ++ + + G + GN+ Y
Sbjct: 90 WGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACGSRHTVVWLENGRAYSCGNNFYV 149
Query: 209 QI-------SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
Q+ + E Q+ P L ++V V+ G L + G V G +G
Sbjct: 150 QLGYDFRVKNYKENQV-LPHFLRPIMH-RKVVQVSCGEKFTLFLFESGQVAGCGANNFGQ 207
Query: 259 LGQGPKVSR-SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
LG G + S KP P + + AG C A+T G LY WG
Sbjct: 208 LGNGTRAEMVSPKPLDNPENVI------------RIAAGSCHSLAVTATGELYAWG 251
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 128/309 (41%), Gaps = 37/309 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N QLG ++ P+++V S+ + +A G HT IT G
Sbjct: 285 GANWSGQLGDGTTDERSTPVDVV-----------GLSSGVTAIAAGNDHTCAITTGGGVS 333
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G N + Q G G ++ + + + G HT +T G V G
Sbjct: 334 CWGVNQYSQLGDGTTTQQSTP------VVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWG 387
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
GQ G G + TP V G G + + C L S +G V WGN+E GQ+
Sbjct: 388 RNWSGQLGDGTTTQRRTPMQVEGLSSGVADITAGDSHTCAL--STEGGVTCWGNNESGQL 445
Query: 211 SE-SEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSW---GYGLLGQGPKV 265
+ + +Q STP Q +G+S +V + +G S L+ EG V W G G LG G
Sbjct: 446 GDGTTIQRSTPV---QVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTT 502
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
RS P + G S V ++ AG A+T G + WG N YGQLG GT
Sbjct: 503 QRST-----PVQVEGL-----SSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTT 552
Query: 326 EDQPFPLKV 334
+ P+ V
Sbjct: 553 TQRNMPVNV 561
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 119/281 (42%), Gaps = 24/281 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V+ S+ + + G +HT +T G +G N +GQ G G + + N+
Sbjct: 507 PVQVEGLSSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMP-----VNV 561
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L + G HT L+ G V GW Q G G N TP V G G
Sbjct: 562 VGLS-SGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSGVA 620
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ A C L S G+V WG + YGQ+ + + Q TP V++ S + + +G
Sbjct: 621 AIAAGYAHTCALITS--GEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS--SEVAAIVAG 676
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+ L+ G V WG Y LG G RS IP + G S V +L A
Sbjct: 677 YAHTCALSTGGGVTCWGWNKYYQLGNGTISQRS-----IPMDVDGL-----SSGVAALAA 726
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G ++ G + WG + YGQLG+GT+ + P+ V V
Sbjct: 727 GDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTV 767
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 119/284 (41%), Gaps = 30/284 (10%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R P+ V+ S+ + + G +HT ++ G +GNN GQ G G +
Sbjct: 403 RTPMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTP------ 456
Query: 118 NIADLEG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+EG ++ G HT L+ G V G GQ G G + TP V G
Sbjct: 457 --VQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLS 514
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTP-RVLSQCKGVSRIV 233
G + + C L + G V WG + YGQ+ + + Q + P V+ GV+ I
Sbjct: 515 SGVMAITAGDSHTCAL--TTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAAI- 571
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
A+GGS L+ EG V WG Y LG G + + + P + G S V
Sbjct: 572 --AAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNT-----PVQVEGL-----SSGV 619
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ AG A+ G + WG N YGQLG GT + P+ V
Sbjct: 620 AAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVV 663
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
P+ V S+ + +A G AHT +T + G +GNN GQ G GI + +
Sbjct: 97 NTPVAVNGLSSGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQ---- 152
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEI 175
+A L + G+ HT LT G V +C WG++ GQ G G + TP V G
Sbjct: 153 -VAGLS-SGVAAIAAGEYHTCALTTDGAV-TC-WGSNGYGQLGDGTTTQRSTPVQVAGLS 208
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTP-RVLSQCKGVSRIV 233
G + + C L + G V WG + GQ+ + + Q STP VL S +
Sbjct: 209 SGVTAITAGGSHTCAL--TTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLS---SEVA 263
Query: 234 DVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ +G L G V WG G LG G RS P + G S V
Sbjct: 264 AITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERST-----PVDVVGL-----SSGV 313
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ AG AIT G + WG NQY QLG GT Q P+ V
Sbjct: 314 TAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVV 357
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 130/336 (38%), Gaps = 41/336 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IA GY T T S + G N QLG ++ R P+ V
Sbjct: 109 VVAIAAGYAHTCALTTSGGVSCW----GNNESGQLGNGITIQR-----------RTPVQV 153
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S+ + +A G HT +T + +G+N +GQ G G + + +A L
Sbjct: 154 AGLSSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQ-----VAGLS 208
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ G HT LT G V G +GQ G G + TP V G +
Sbjct: 209 -SGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSSEVAAITA 267
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTP-RVLSQCKGVSRIVDVASGGSA 241
C L + G V WG + GQ+ + + STP V+ GV+ I A+G
Sbjct: 268 GDVYTCAL--TTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGVTAI---AAGNDH 322
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ G V WG Y LG G +S P ++ S+ ++ AG
Sbjct: 323 TCAITTGGGVSCWGVNQYSQLGDGTTTQQS-TPVVVNGL---------SSRAAAIAAGDG 372
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G + WG+N GQLG GT + P++V
Sbjct: 373 HTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQV 408
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+ A C L + V WGN+E+GQ+ + + +Q +TP ++ S +V +A+G
Sbjct: 61 IAAGDAYTCALTTNSA--VICWGNNEFGQLGDGTTIQRNTPVAVNGLS--SGVVAIAAGY 116
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L G V WG G LG G + R P + G S V ++ AG
Sbjct: 117 AHTCALTTSGGVSCWGNNESGQLGNGITIQRRT-----PVQVAGL-----SSGVAAIAAG 166
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+T G + WG N YGQLG GT + P++VA
Sbjct: 167 EYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVA 205
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 24/253 (9%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---RQIPWTPDTAVQQVSCGHRHTLFLTATGKVYAC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++ + LGH + P L+ E++ I+++S LA+SD G V WG+++ GQ
Sbjct: 65 --GSNDYSQLGHDLPTKRPQLI-PELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQ 121
Query: 210 I---SESEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ---- 261
+ +E E+ + P+V+ Q VS+ +V +A G + L G +YSWG + GQ
Sbjct: 122 LGHATEKEI-VQLPKVVRQL--VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 178
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
P L +TL G + ++ G I+ G ++ WG+N GQLG
Sbjct: 179 SPNDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Query: 322 LGTVEDQPFPLKV 334
L ++ +P ++
Sbjct: 232 LNDETNRAYPTQL 244
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ ++ G HT+ +T + G+N + Q G + + I +L+
Sbjct: 38 PDTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRP-------QLIPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I+ CG H+L L++ G+V S WG + LGH +E P +VR ++ + +V+
Sbjct: 91 VIIQISCGSRHSLALSDWGQVLS--WGDNDCGQLGHATEKEIVQLPKVVR-QLVSKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P L+ C R+
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPNDLTHCNYPLRLTTLLGIPLAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +R+ L G V
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN---PLELVMSFVRIP 60
+ IACG ++ T + L+ G N QLG + P + PL L + + IP
Sbjct: 145 VVQIACGNNHSLALTSCGE----LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIP 199
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L +A G H+ +I+ + F +G N+ GQ G D + + +
Sbjct: 200 LAA---------IACGGNHSFLISKSGAVFGWGRNNCGQLGLN-----DETNRAYPTQLK 245
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L + A CG + ++FLT G V++CG GA GQ G G +N+ P +V E+ G I
Sbjct: 246 TLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMGSTI 304
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVL 223
+++ LA V +G V+ +G GQ+ + S + P+V+
Sbjct: 305 TQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 135/326 (41%), Gaps = 65/326 (19%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK----------------- 46
+ ++CG+ T+ T + K++ CG N SQLG+ P K+
Sbjct: 42 VQQVSCGHRHTLFLTATG----KVYACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQISC 97
Query: 47 GNPLELVMS-----------------------FVRIPLPVKH-PSTQIKHLATGRAHTIV 82
G+ L +S V++P V+ S + +A G H++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T +++G+N +GQ G + D + + L G + CG +H+ +++
Sbjct: 158 LTSCGELYSWGSNIYGQLG--VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 143 SGKVYSCGWGAD--GQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDV 199
SG V+ GWG + GQ GL N+ P ++ G R L +++G V
Sbjct: 216 SGAVF--GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFL--TNEGGV 271
Query: 200 FGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASGGS-ACTMLNDEGLVYSW 254
F G YGQ+ S +EM PR++ + G S I VA G + G VY++
Sbjct: 272 FTCGAGAYGQLGHGFSSNEM---LPRMVMELMG-STITQVACGNRHTLAFVPSRGKVYAF 327
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFG 280
G G GQ +RS K ++P + G
Sbjct: 328 GLGSSGQLG--TRSTKSLMLPQVVIG 351
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I + IACG + + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 198 IPLAAIACGGNHSFLISKSG----AVFGWGRNNCGQLGLNDETNRAYPTQL--KTLR--- 248
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++ A G ++ +T+ G FT G ++GQ G G E + +
Sbjct: 249 -----TLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE-----MLPRMVME 298
Query: 122 LEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G I CG HTL F+ GKVY+ G G+ GQ G + P +V G
Sbjct: 299 LMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 24/268 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G +HT+ + ++G GQ G G D + ++ +G+ I+ C
Sbjct: 17 ISAGASHTVALLTGNVVCSWGRGEDGQLGHG-----DTDDRLLPTKLSAFDGQDIVSVTC 71
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC-V 190
G D+T+ ++SGK VYS GWG G+ G G ++ P +R ++G RI ++S DC
Sbjct: 72 GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCG-DCHC 129
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LAV+ + V WG ++ G++ + S P+ + +G+ RI VA+G + ++G
Sbjct: 130 LAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDG 188
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+Y WG YG LG G R LIP + K+ + G +I++
Sbjct: 189 DLYGWGWGRYGNLGLGDTNDR-----LIPEKVN-----IDGDKIVMVSCGWRHTISISSS 238
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G LY G ++YGQLG G ED P KV
Sbjct: 239 GGLYTHGWSKYGQLGHGDFEDCLVPRKV 266
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 4 ITDIACGYGFTVVATKS-KDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
I + CG +TV +KS KD ++ G +LG+ DP S + IP P
Sbjct: 66 IVSVTCGADYTVARSKSGKD----VYSWGWGDFGRLGHGDP-----------SDLFIPHP 110
Query: 63 VKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +IK ++ G H + +T ++G N G+ G G ++ K I
Sbjct: 111 IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQK-----ILA 165
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
EG +I G +H++ +TE G +Y GWG G GLG N++ P V I+G++IV
Sbjct: 166 FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIV 223
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ 216
+S +++S G ++ G S+YGQ+ + +
Sbjct: 224 MVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFE 258
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G HT+ L V S G G DGQ G G +++ P + +G+ IV ++ D +A
Sbjct: 20 GASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVA 78
Query: 193 VSDKG-DVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
S G DV+ WG ++G++ + + P + +G+ RI ++ G C + E
Sbjct: 79 RSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDCHCLAVTMENK 137
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V SWG G LG G + K + +P + +++ + AG AIT G
Sbjct: 138 VLSWGRNQNGELGLG-----TTKDSHVPQKILAFEGI----RIKMVAAGAEHSVAITEDG 188
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
LY WG +YG LGLG D+ P KV + G K
Sbjct: 189 DLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK 221
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++I I+CG + T K+ G N + +LG + P + +++F I
Sbjct: 117 LRIKQISCGDCHCLAVTMEN----KVLSWGRNQNGELGLGTTKDSHVP-QKILAFEGI-- 169
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+IK +A G H++ IT++ + +G +G G G + K +
Sbjct: 170 -------RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEK------VN 216
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++G+KI+ CG HT+ ++ SG +Y+ GW GQ G G + CLV +++
Sbjct: 217 IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFED----CLVPRKVQ 267
>gi|403350728|gb|EJY74833.1| hypothetical protein OXYTRI_03788 [Oxytricha trifallax]
Length = 1271
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ G++H+L LT G V+S G G G G Q P +++ + +RIV+++
Sbjct: 449 LLSVSSGRNHSLHLTRDGDVFSYGSGTFSAVGHGGSKGQLNPTVLK-PLRDKRIVQIACG 507
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ L ++DK DVF WG GQ+ S+S STP+ + G + +A+G
Sbjct: 508 ENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIKSFYG-KPVSYIAAGSQYSLA 566
Query: 245 LNDEGLVYSWGYGLLGQ-GPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G V+ WG LGQ G R ++ PT I FG + N K+ ++ AG A
Sbjct: 567 ITKDGSVWGWGEAKLGQLGMGKQREVRLPTKIS---FGDDE-NAKNFIQ-CSAGYGHSAA 621
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T GHLY WG N +GQLG E Q P KV
Sbjct: 622 LTQEGHLYTWGFNNFGQLGQNNFETQWTPSKV 653
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+++GR H++ +T + F++G+ +F G G +G+ + L ++I+ C
Sbjct: 452 VSSGRNHSLHLTRDGDVFSYGSGTFSAVGHG-----GSKGQLNPTVLKPLRDKRIVQIAC 506
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G++H+L LT+ V++ G G +GQ GL + TP ++ G+ + +++ L
Sbjct: 507 GENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIKS-FYGKPVSYIAAGSQYSL 565
Query: 192 AVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
A++ G V+GWG ++ GQ+ + E+++ T + + ++G L E
Sbjct: 566 AITKDGSVWGWGEAKLGQLGMGKQREVRLPTKISFGDDENAKNFIQCSAGYGHSAALTQE 625
Query: 249 GLVYSWGYGLLGQ 261
G +Y+WG+ GQ
Sbjct: 626 GHLYTWGFNNFGQ 638
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVAS 237
++ +SS + L ++ GDVF +G+ + + S+ Q++ P VL + RIV +A
Sbjct: 449 LLSVSSGRNHSLHLTRDGDVFSYGSGTFSAVGHGGSKGQLN-PTVLKPLRD-KRIVQIAC 506
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G + +L D+ V++WG G GQ + + P I S +G+ V +
Sbjct: 507 GENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIKS-FYGK-------PVSYIA 558
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
AG AIT G ++ WG+ + GQLG+G + P K++ G
Sbjct: 559 AGSQYSLAITKDGSVWGWGEAKLGQLGMGKQREVRLPTKISFG 601
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 17/170 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG ++V T D +F G + QLG + + + + SF P
Sbjct: 500 RIVQIACGENHSLVLTDKAD----VFAWGRGFEGQLGLSKSIEIASTPQYIKSFYGKP-- 553
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ ++A G +++ IT + + +G GQ G G +E K + D
Sbjct: 554 -------VSYIAAGSQYSLAITKDGSVWGWGEAKLGQLGMGKQREVRLPTKI---SFGDD 603
Query: 123 EGEK-IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
E K + G H+ LT+ G +Y+ G+ GQ G + Q TP V
Sbjct: 604 ENAKNFIQCSAGYGHSAALTQEGHLYTWGFNNFGQLGQNNFETQWTPSKV 653
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 142/328 (43%), Gaps = 80/328 (24%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQGKWFCH 117
LPV+ + + +A G H++ + + A+ +G+N+ GQ G G + E Q
Sbjct: 140 LPVQAQGLSGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPEPVQ------ 193
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L G ++ G H+L + G V++ G A GQ G G ++ P V+G + G
Sbjct: 194 -VQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQG-LSG 249
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+V +++ LAV + G V+GWG ++ Q+ + M++ P +Q +G+S +V VA+
Sbjct: 250 --VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVP---AQVQGLSAVVAVAA 304
Query: 238 G----------------------------------------GSACTMLND--------EG 249
G G ND +G
Sbjct: 305 GDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDG 364
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WGY G LG G +R L+P Q + S+V S++AG A+ +
Sbjct: 365 TVWAWGYNSTGQLGDGTTTTR-----LVPV------QVSGLSEVVSVVAGGYHSLAVRSD 413
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G + WG N YGQLG G+ P P++V
Sbjct: 414 GSAWDWGSNAYGQLGDGSTTYLPVPVRV 441
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 38/305 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK-HPSTQIKHLATGRAHTIVIT 84
++ G NS QLG + ++ +P+PV+ +++ + G +H++ +
Sbjct: 16 TVWAWGANSSGQLG-----------DGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVR 64
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ + +G+N+ GQ G +E + + L G ++ G H L L G
Sbjct: 65 SDGTVWAWGSNASGQLG-----DETTISRSTPVQVLGLSG--VLFVAAGSSHVLALRYDG 117
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G + GQ G G NN+ P +G + G ++ +++ + LAV G + WG+
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALPVQAQG-LSG--VMAVAAGDNHSLAVRSDGSAWAWGS 174
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
+ GQ+ E V Q +G+S +V VA+G + + +G V++WG G LG
Sbjct: 175 NASGQLGEGTTSNRPEPV--QVQGLSGVVAVAAGSAHSLAVRSDGTVWAWGANASGQLGD 232
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G R L+P Q S V ++ AG A+ N G ++ WG+N QLG
Sbjct: 233 GTTTDR-----LVPV------QVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG 281
Query: 322 LGTVE 326
G++
Sbjct: 282 KGSMR 286
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 41/316 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++ G N+ QLG + P++ V+ + + +A G +H + +
Sbjct: 68 TVWAWGSNASGQLGDETTISRSTPVQ-VLGL-----------SGVLFVAAGSSHVLALRY 115
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ + +G+NS GQ G G L G +M G +H+L + G
Sbjct: 116 DGTVWAWGSNSSGQRGDGTTNNRA-----LPVQAQGLSG--VMAVAAGDNHSLAVRSDGS 168
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
++ G A GQ G G +N+ P V+G + G +V +++ LAV G V+ WG +
Sbjct: 169 AWAWGSNASGQLGEGTTSNRPEPVQVQG-LSG--VVAVAAGSAHSLAVRSDGTVWAWGAN 225
Query: 206 EYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
GQ+ + +T R++ Q +G+S +V VA+G + ++G V+ WG LG+
Sbjct: 226 ASGQLGDGT---TTDRLVPVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGK 282
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G SM+ L+P+ Q S V ++ AG A+ + G ++ G N GQLG
Sbjct: 283 G-----SMR-LLVPA------QVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLG 330
Query: 322 LGTVEDQPFPLKVAVG 337
GT + P+ V G
Sbjct: 331 DGTTTYRLVPVPVLSG 346
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAVDCV 190
G H+L L G V++ WGA+ LG +P V +++G +V + +
Sbjct: 3 AGSSHSLALRSDGTVWA--WGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LAV G V+ WG++ GQ+ E+ + STP Q G+S ++ VA+G S L +G
Sbjct: 61 LAVRSDGTVWAWGSNASGQLGDETTISRSTPV---QVLGLSGVLFVAAGSSHVLALRYDG 117
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WG G G G +R++ Q S V ++ AG A+ +
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALPV-----------QAQGLSGVMAVAAGDNHSLAVRSD 166
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G + WG N GQLG GT ++P P++V
Sbjct: 167 GSAWAWGSNASGQLGEGTTSNRPEPVQV 194
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 35/258 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++G G N +QLG R + +P V+ S + +A G H++ +
Sbjct: 268 TVWGWGRNDSNQLGKGSMR------------LLVPAQVQGLSAVVA-VAAGDTHSLAVGS 314
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ + G+N+ GQ G G + L G ++ H+L + G
Sbjct: 315 DGTVWAVGSNNNGQLGDGTTTYR-------LVPVPVLSG--VVSVAANDYHSLAVRSDGT 365
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
V++ G+ + GQ G G + P V G E +V + + LAV G + WG++
Sbjct: 366 VWAWGYNSTGQLGDGTTTTRLVPVQVSGLSE---VVSVVAGGYHSLAVRSDGSAWDWGSN 422
Query: 206 EYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
YGQ+ + S + P + Q GV VASG S L +G V++WGY G LG
Sbjct: 423 AYGQLGDGSTTYLPVPVRVQQLSGVGA---VASGSSHSLALRSDGTVWTWGYNSFGQLGN 479
Query: 262 GPKVSRSMKPTLIPSTLF 279
GP ++ + T+I S L+
Sbjct: 480 GPPLNTA---TVIRSLLY 494
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V+ S + +A G H++ + ++ + +G N Q G+G ++
Sbjct: 240 VPVQVQGLSGVVA-VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMR---------LLV 289
Query: 119 IADLEGEKIMDAVCGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
A ++G + AV D H+L + G V++ G +GQ G G + P V + G
Sbjct: 290 PAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPV---LSG 346
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+V +++ LAV G V+ WG + GQ+ + +T V Q G+S +V V +
Sbjct: 347 --VVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTT--TTRLVPVQVSGLSEVVSVVA 402
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
GG + +G + WG YG LG G T +P + + S V ++
Sbjct: 403 GGYHSLAVRSDGSAWDWGSNAYGQLGDG-------STTYLPVPV----RVQQLSGVGAVA 451
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+ + G ++ WG N +GQLG G
Sbjct: 452 SGSSHSLALRSDGTVWTWGYNSFGQLGNG 480
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
+A+G S L +G V++WG GQ + + P +P Q S+V ++
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPV------QVQGLSEVVAVD 54
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ + G ++ WG N GQLG T + P++V
Sbjct: 55 AGSSHSLAVRSDGTVWAWGSNASGQLGDETTISRSTPVQV 94
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 83 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 134
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 135 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 191
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 192 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 250
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 251 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 302
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 303 LSDEEDRESPCHVKL 317
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 115 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 161
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 162 ---DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 214
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 215 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 273
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 274 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 333
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 334 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 385
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 386 LAFVPSSGLIYAFGCGARGQLGTG 409
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIVH 167
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 168 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 226
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 227 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 284
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V+ WG GQ + + L KV + G +T
Sbjct: 285 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ------KVVYISCGEEHTAVLTK 338
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 339 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 367
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 338
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 339 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 393
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 394 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 422
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 145/335 (43%), Gaps = 42/335 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+ D+A G+G +V N ++ G + LGY + + +P
Sbjct: 42 SVVDVAEGHGLSVALLD----NGTVWTWGHSWHGGLGYESVQDQ-------------YVP 84
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ P + + + A + D+ +T+G N +GQ G G + HN +
Sbjct: 85 KRVPIYNVTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMD---------HNTPGM 135
Query: 123 EG--EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
G + G H L L G V++ G GQ G G + TP V G RI
Sbjct: 136 VGGLGNVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGL---PRI 192
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V +S+ + LA+ D G+V+ WG ++ GQ+ + IS+P + KG++ + VA G S
Sbjct: 193 VAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGT-NISSPNP-KKVKGLANVTAVAGGSS 250
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L D+G +++WG + QG + K +P + G + V + AG T
Sbjct: 251 FSLALKDDGTIWAWGSNV--QGELGVGTTKDCPLPVKVQGL------TNVIRIAAGGETS 302
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
AITN G L++WG N+ G+ G ED P + +
Sbjct: 303 AAITNDGSLWVWGHNEQGKYISGG-EDASSPRRAS 336
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 43/292 (14%)
Query: 53 VMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG 112
+++ + PS + +A G ++ + DN +T+G++ G G VQ++
Sbjct: 28 LVAMAGVRCAASQPS--VVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPK 85
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
+ +N+ + + +V L + G V++ GW GQ G G + TP +V
Sbjct: 86 RVPIYNVTSV--DSCFASVAA------LKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVG 137
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSR 231
G + ++ + +LA+ + G V+ WG + GQ+ + + + TP +S G+ R
Sbjct: 138 GL---GNVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVS---GLPR 191
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
IV +++G + ++D G V++WG G LG G +S NPK
Sbjct: 192 IVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSP----------------NPK- 234
Query: 289 KVESL-----IAGPCTFG-AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
KV+ L +AG +F A+ + G ++ WG N G+LG+GT +D P P+KV
Sbjct: 235 KVKGLANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKV 286
>gi|156341397|ref|XP_001620745.1| hypothetical protein NEMVEDRAFT_v1g222753 [Nematostella vectensis]
gi|156206042|gb|EDO28645.1| predicted protein [Nematostella vectensis]
Length = 125
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCH-NIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
F G NS GQCG G V + + K F H + D G I+ VCG DH+L L+ GKV+S
Sbjct: 1 FVIGGNSQGQCGFGGVTD---KVKSFQHLPLPDATGA-IVKVVCGMDHSLLLSCDGKVFS 56
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
CGWGADGQTGLG ++ + GE+ G +I +SSAVDC LAVS
Sbjct: 57 CGWGADGQTGLGFFDDAVKVSQLEGELSGVKIKDISSAVDCCLAVS 102
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 24/270 (8%)
Query: 70 IKHLAT---GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
I LAT G HT+ + D+ F++G+ +G+ G G + + + I L+ E
Sbjct: 373 IIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQ-----IIALQAEH 427
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ A CG H+ LT+ GKV++ G G G G G + Q+TP L+ ++ E I +++
Sbjct: 428 VVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILS-LKNEHISQIACG 486
Query: 187 VDCVLAVSDKG-DVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
D LA+++ G ++ WG+ E+G++ + S P ++ + V + +A G +
Sbjct: 487 KDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVC-LKKIACGSKFSIV 545
Query: 245 LNDEGLVYSWGY-GLLGQG-PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF-G 301
L G +Y++G+ LG + + P ++ S + P ++ IA C +
Sbjct: 546 LATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLM-------PHPIID--IAVGCNYIL 596
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+ N G+++ WG N+ GQLG+GT P
Sbjct: 597 ALDNSGNIWGWGTNEEGQLGIGTTNPHYLP 626
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ + VCGQ+ T L +G V++CG G G+ G G +++ + + E++G I++L+
Sbjct: 319 KQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPIT-ELQGYCIIQLA 377
Query: 185 SAV---DCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ LAV+D G+VF WG+ +YG++ SE Q ++++ +V + G
Sbjct: 378 TSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIAL--QAEHVVQASCGF 435
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+L +G V+++G YG+LG G S P LI S L +H + + G
Sbjct: 436 KHSAVLTKDGKVFTFGQGQYGILGDGGN-SPQKTPQLILS-LKNEH-------ISQIACG 486
Query: 297 PCTFGAITNFG-HLYMWGKNQYGQLGLGTVEDQPFP 331
A+ N G LY WG ++G+LGLG+ + P
Sbjct: 487 KDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIP 522
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ IACG T+ A + K L +G G LG R N LV S+ + L
Sbjct: 480 ISQIACGKDHTL-ALANNGKKLYAWGDGEFGKLGLGSTSVRSIPN---LVDSYRNVCL-- 533
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K +A G +IV+ N +TFG+ F GI E D ++ L
Sbjct: 534 -------KKIACGSKFSIVLATNGYLYTFGHKDF----LGIA-ETDLLDNTIPQIVSSLM 581
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
I+D G ++ L L SG ++ G +GQ G+G N P LV G I +L
Sbjct: 582 PHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLV-CTFSGTNITRL 640
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
S+ A W NS+ S +++QI TP +
Sbjct: 641 SAGTTHCAA---------WSNSQSPS-SNTQLQIGTPNAI 670
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACT-MLNDEGL 250
+S V+ WG++ +G++ + + P ++S K V IV G CT +L G
Sbjct: 284 ISAPITVYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVREIV----CGQNCTFLLQTNGS 339
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V++ G YG LGQG + + +L+P T + Q ++ + + G A+ + G
Sbjct: 340 VFACGEGTYGRLGQG---TSDDEHSLVPIT---ELQGYCIIQLATSLGGDGHTLAVADSG 393
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG YG+LG G E Q P ++
Sbjct: 394 EVFSWGDGDYGKLGHGNSERQRKPKQI 420
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 28/316 (8%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F G N LG H P K E + S V+ VK I A G H + + D
Sbjct: 59 MFTWGWNQRGTLG-HQPETK---TENIPSRVKALANVK-----ITQAAIGGWHCLAVDDQ 109
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE----GEKIMDAVCGQDHTLFLTE 142
A+ +G N +GQCG +++E G+ +I + + G H++ LT
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKDE--MGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTR 167
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V++ WG G + P V+G +E R++ + + + LA+ + G + W
Sbjct: 168 EGHVWT--WGQPWPPG--DIKQISVPVRVQG-LENVRLIAVGAFHN--LALEEDGRLLAW 220
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG 262
GN+EYGQ+ + Q ++ V Q +VD+A+GG T L D+G VY WG G G+
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRL 280
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
++P + + + + G A+T G ++ +G+ +G+LG
Sbjct: 281 GLGDNDKSSKMVPQKV----NLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336
Query: 323 G--TVEDQPFPLKVAV 336
G QP L + +
Sbjct: 337 GRKVTTGQPLELPIKI 352
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ + G G DGQ G+G +E C+V +E + + S LA+ D G +F WG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEA-LEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 206 EYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ G + + + T + S+ K ++ +I A GG C ++D+G Y+WG YG G
Sbjct: 66 QRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
+ P +P + + + PK V + AG +T GH++ WG+
Sbjct: 125 EEPLKDEMGRP--VRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 128/320 (40%), Gaps = 32/320 (10%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
S+D + + G N D +LG P + + LP T I +A G H
Sbjct: 67 SRDASDTVLAWGDNKDGELGDGTTTDSSTP-------IAVDLPAG---TTITAIAAGHDH 116
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA-DL-EGEKIMDAVCGQDHT 137
++ +T A +GNN FGQ G G + IA DL G + G DH+
Sbjct: 117 SLAVTSAGTALAWGNNLFGQLGDGSTTDSSTP-------IAVDLPAGTTVTAIAAGDDHS 169
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L +T +G + G G+ G G ++TP V G + +++ + LA++ G
Sbjct: 170 LAVTSAGTALAWGDNDRGELGDGTTTRRDTPVDVD-LPAGTTVTAIAAGIGHSLALTSAG 228
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY- 256
V WG + GQ+ + S+ + + + +A+G + G + +WG
Sbjct: 229 TVLTWGLNSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNN 288
Query: 257 --GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G + S P + + + ++ G A+T+ G WG
Sbjct: 289 SDGQLGDG-TTTNSSTPIAV--------NLPASTTITAIDGGRDHSLAVTSAGSALAWGD 339
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
N GQLG GT + P+ V
Sbjct: 340 NDDGQLGDGTTTNSSTPIAV 359
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 21/280 (7%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+ V P+ T + +A G H++ +T A +G+N G+ G G D
Sbjct: 148 PIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTPVD----- 202
Query: 119 IADL-EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
DL G + G H+L LT +G V + G +DGQ G G + TP V G
Sbjct: 203 -VDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTDSSTPIAVD-LPAG 260
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +++ LAV+ G + WGN+ GQ+ + S+ + + I +
Sbjct: 261 TTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDG 320
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G + G +WG G LG G + S P + + SL
Sbjct: 321 GRDHSLAVTSAGSALAWGDNDDGQLGDG-TTTNSSTPIAVNLPADTTVTATTAGSLHSL- 378
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G + WG N G+LG GT + P+ V
Sbjct: 379 -------AVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAV 411
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 20/269 (7%)
Query: 6 DIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
D+ G T +A D +L + G + L + D +G + + P+ V
Sbjct: 152 DLPAGTTVTAIA-AGDDHSLAVTSAG----TALAWGD-NDRGELGDGTTTRRDTPVDVDL 205
Query: 66 PS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA-DL- 122
P+ T + +A G H++ +T T+G NS GQ G G + IA DL
Sbjct: 206 PAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTDSSTP-------IAVDLP 258
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G + G H+L +T +G + + G +DGQ G G N TP V I
Sbjct: 259 AGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPAS-TTITA 317
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ D LAV+ G WG+++ GQ+ + S+ + + + +G
Sbjct: 318 IDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPADTTVTATTAGSLHS 377
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRS 268
+ G + +WG G LG G + S
Sbjct: 378 LAVTTAGTILAWGNNSDGRLGDGTTTNSS 406
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 27/264 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ H++ G HT ++ + FTFG+N++GQ G G + + I L+ EK+
Sbjct: 26 KVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTR-----IKSLKAEKVH 80
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSA 186
CG+ HTL TESGK+YS G D Q GLG L++++ +P +++G +E + LS+
Sbjct: 81 QVACGRSHTLLATESGKIYSFGCNNDRQLGLG-LDDEKVCSPTVIKG-LESHAVKMLSAG 138
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ ++DKG V+ WG E GQ+ E + TP L +V +A G +
Sbjct: 139 MYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDV---DDEVVCIACGYYHTAL 195
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ G + ++G G LG+G + P ++ + V S+ G
Sbjct: 196 VTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI---------EGHVVSVACGGAHTV 246
Query: 302 AITNFGHLYMWGKNQYGQLGLGTV 325
AIT + +Y +G GQLG G +
Sbjct: 247 AITGW-LVYTFGNGSSGQLGHGNM 269
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+K++ CG +HT L G+V++ G A GQ GLGH P ++ ++ E++ +++
Sbjct: 25 DKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIK-SLKAEKVHQVA 83
Query: 185 SAVDCVLAVSDKGDVFGWG--NSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGG-- 239
L ++ G ++ +G N + + ++ +P V+ KG+ S V + S G
Sbjct: 84 CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVI---KGLESHAVKMLSAGMY 140
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+C +L D+G VY WG G LG G V++ P + + +V + G
Sbjct: 141 HSC-VLTDKGSVYLWGGGEEGQLGFGEDVTKHETP----------ERLDVDDEVVCIACG 189
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+T G L +G+ G+LG G+
Sbjct: 190 YYHTALVTAGGKLLTFGETDEGKLGRGS 217
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IACGY T + T KL G + +LG +P V
Sbjct: 186 IACGYYHTALVTAGG----KLLTFGETDEGKLGRGSDTGDNC----------LPKVVDGI 231
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG-IVQEEDYQGKWFCHNIADLEGE 125
+ +A G AHT+ IT +TFGN S GQ G G ++ + D H I +
Sbjct: 232 EGHVVSVACGGAHTVAIT-GWLVYTFGNGSSGQLGHGNMLLQADTP-----HKIVWQKPT 285
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPC 169
K+ A CG++HT +T+ G++++CG G G+ LG N NQ PC
Sbjct: 286 KVRSASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPC 331
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 134/329 (40%), Gaps = 50/329 (15%)
Query: 26 KLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
KL+ CG N +LG +K P+EL+ IK +A G HT+
Sbjct: 137 KLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIF------------IKQVACGDYHTL 184
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++ + +G + + G QE K+ + G+KI CG H+L L
Sbjct: 185 ALSKEGQVYVWGGSLHNKRG-DRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALD 243
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
++G +YS G G G+ G G +QETP ++ +G+ I ++ + LA++ V+
Sbjct: 244 DNGTLYSWGVGEKGECGHGKFEDQETPQRIKF-FDGKIITQIEAGNHHTLAITADNQVYA 302
Query: 202 WGNSEYGQISESEMQ-------ISTP---------------RVLSQCKGVSRIVDVASGG 239
WG+ YGQ E + ++ P +L K +I +A+G
Sbjct: 303 WGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGE 362
Query: 240 SACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L G ++S+GY GQ V +P L+ L K + AG
Sbjct: 363 MHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGML--------NHKTVQVAAGR 414
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+TN +Y G NQYGQ GL E
Sbjct: 415 NHSLCLTNKNDVYACGNNQYGQCGLPDRE 443
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 44/297 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN----PLELVMSFV 57
I I +ACG T+ SK+ + ++G L++ + G +K N P+ L+ SF
Sbjct: 171 IFIKQVACGDYHTLAL--SKEGQVYVWGGSLHN--KRGDRSQERKDNAKYKPV-LLQSFA 225
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+IK + G H++ + DN +++G G+CG G ++++ +
Sbjct: 226 ---------GKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQR---- 272
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
I +G+ I G HTL +T +VY+ G G GQ G G N P LV +G
Sbjct: 273 -IKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQG 331
Query: 178 ERIVKLSSAVD---------------------CVLAVSDKGDVFGWGNSEYGQISESEMQ 216
L +V L ++ G +F +G ++ GQ+ + +
Sbjct: 332 NNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVD 391
Query: 217 ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
L + + V VA+G + L ++ VY+ G GQ R M+ T
Sbjct: 392 NYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTF 448
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 113/296 (38%), Gaps = 32/296 (10%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
E +M + P K+ QIK + H V ++FG N+ G+ G G Y
Sbjct: 60 EDLMEKCMMSWPNKYSLDQIK-----KYHAYV-------WSFGQNTKGELGTG-----HY 102
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
+ L K++ G H+ +TE GK++ CG + GL +
Sbjct: 103 NEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTF 162
Query: 171 VRGEIEGERIVKLSSAVDC-VLAVSDKGDVFGWGNSEYG----QISESEMQISTPRVLSQ 225
E+ + +K + D LA+S +G V+ WG S + + E + VL Q
Sbjct: 163 KPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQ 222
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQ 283
+I + G L+D G +YSWG G G+ K P I +
Sbjct: 223 SFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQRI--------K 274
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F + + AG AIT +Y WG +YGQ G G E+ P V Q
Sbjct: 275 FFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQ 330
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 24/253 (9%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---SQIPWTPDTAVQQVACGHRHTLFLTANGKVYAC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++ + LGH + P L+ E++ ++++S LA+S+ G V WG+++ GQ
Sbjct: 65 --GSNDHSQLGHELPTKRPLLI-PELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQ 121
Query: 210 I---SESEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ---- 261
+ ++ E+ + P+V+ Q VS+ +V +A G + L G +YSWG + GQ
Sbjct: 122 LGHATDKEI-VQLPKVVRQL--VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 178
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
PK L +TL G + ++ G I+ G ++ WG+N GQLG
Sbjct: 179 SPKDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Query: 322 LGTVEDQPFPLKV 334
L ++ +P ++
Sbjct: 232 LNDEANRAYPTQL 244
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T N + G+N Q G + + I +L+
Sbjct: 38 PDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLL-------IPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
++ CG H+L L+E G+V S WG + LGH ++E P +VR ++ + +V+
Sbjct: 91 VVIQISCGSRHSLALSEWGQVLS--WGDNDCGQLGHATDKEIVQLPKVVR-QLVSKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P+ L+ C R+
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPKDLTHCNYPLRLTTLLGIPLAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +R+ L G V
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 147/345 (42%), Gaps = 46/345 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG+ T+ T N K++ CG N SQLG+ P K+ P+
Sbjct: 42 VQQVACGHRHTLFLTA----NGKVYACGSNDHSQLGHELPTKR---------------PL 82
Query: 64 KHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P Q + ++ G H++ +++ ++G+N GQ G +E K +
Sbjct: 83 LIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPK----VVR 138
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC---LVRGEIEG 177
L + ++ CG +H+L LT G++YS G GQ G+ + T C L + G
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-THCNYPLRLTTLLG 197
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+ ++ + +S G VFGWG + GQ+ E + P L + + + VA
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLG-VRFVA 256
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G L +EG V++ G YG LG G S M P ++ L G S + +
Sbjct: 257 CGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS-SNEMLPRMV-MELMG-------STITQV 307
Query: 294 IAG-PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T + + G +Y +G GQLG + + P +V +G
Sbjct: 308 ACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVIG 351
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 148/318 (46%), Gaps = 25/318 (7%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG + +LG +D R + +F PL ++K LA G H ++++
Sbjct: 6 VYSCGHGAGGRLGLNDERAR-------TAFTG-PLGTLQ-DVEVKSLACGGKHNLLLSRA 56
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+++G N Q G G+ D++ +W I LE K++ G+DH++ LT+ +V
Sbjct: 57 GKVYSWGYNDSRQTGHGVEDLSDWEPRW----IRALETVKVVQIAAGEDHSVALTDRSEV 112
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G G GQ G G +++ P LV+G ++G+ I + + A++ G V G+G++
Sbjct: 113 FTWGRGLHGQLGHGDVSDVWFPFLVKG-LQGKGIKSIGCGYENTFAITGTGKVLGFGSAA 171
Query: 207 YGQISESEM------QISTPRVLSQCKGVSRIVDV-ASGGSACTM-LNDEGLVYSWGYGL 258
G++ ++ + P Q K +++ + A+GG +M L+ G +YS GY
Sbjct: 172 SGKLGNGDVDGGIGGNVYLP---VQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAA 228
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ ++ +P T Q + V+ + G A++ G +Y WG
Sbjct: 229 NGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINW 288
Query: 319 QLGLGTVEDQPFPLKVAV 336
LG G ED P VA+
Sbjct: 289 ALGHGGTEDTFTPKMVAM 306
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 57/331 (17%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSF 97
GY+D R+ G+ +E + + P ++ T ++ +A G H++ +TD FT+G
Sbjct: 63 GYNDSRQTGHGVEDLSDWE--PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLH 120
Query: 98 GQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
GQ G G V + WF + L+G+ I CG ++T +T +GKV G A G+
Sbjct: 121 GQLGHGDVSD-----VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKL 175
Query: 158 GLGHLN-----NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS- 211
G G ++ N P ++ + I++ + + + +S G ++ G + GQ+
Sbjct: 176 GNGDVDGGIGGNVYLPVQLK-SLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234
Query: 212 --ESEMQISTPRVLS----QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQG 262
E ++ P + KGV + V+ G S L+++G+VYSWG G+ LG G
Sbjct: 235 PFEEVESLNLPYTGTMQEVSHKGV-FVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHG 293
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--------GAITNFGHLYMWGK 314
+ F PK V L A PC A++ G +Y WG+
Sbjct: 294 GT----------------EDTFTPK-MVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGR 336
Query: 315 NQYGQLGLG-TVED------QPFPLKVAVGG 338
N GQLG G ++D Q P +V + G
Sbjct: 337 NFVGQLGTGQNIDDHSADHVQRLPTRVILKG 367
>gi|118363796|ref|XP_001015122.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89296889|gb|EAR94877.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1387
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 39/270 (14%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + +G H I +T+ F++G N+ GQ G L +KI++
Sbjct: 187 ITKVVSGAYHNIALTNENQLFSWGRNNEGQLG--------------------LVDKKIVN 226
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G +H+ F+T+ ++YS G G GQ G G N TP V + ++I+K++
Sbjct: 227 VFSGWNHSFFITKQNELYSFGSGLYGQLGQGKCENSITPDKVLYHEKDQKIIKIACGETH 286
Query: 190 VLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCK--GVSRIVDVASGGSACTML 245
L +S++G VF G ++ GQ + ++ + P+ LS I+D+A G + +
Sbjct: 287 SLLLSEQGQVFACGENQRGQLGLGRNKKVVLQPQYLSNENLFASESIIDIACGRFSVAIT 346
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF-------GQHQFNPKSKVESLIAGPC 298
+Y+W G P P +F G+ Q ++++ G
Sbjct: 347 QKTQSLYAW-------GQFCDTDSNPIYTPQLVFSFNSQKEGKEQPEKNLVKKAVVGGDS 399
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
+ N G LY WGKNQ+G+ G G E++
Sbjct: 400 CIILMKN-GDLYSWGKNQFGECGQGDFENK 428
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 46/253 (18%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC------HNIADLEGEKIMDAVCGQD 135
V+ NE F FG+N +GQ G E GK FC NI CG
Sbjct: 93 VVKYNE-IFVFGSNKYGQIGL----SEKNAGKNFCIPRFCHFNIV------FTSVSCGSH 141
Query: 136 HTLFLTESGKVYSCGWGADGQTG--LGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H++ LT+ G YS G GQ G +N TP L++ +++ I K+ S +A+
Sbjct: 142 HSILLTQDGYAYSIGSNIYGQLGADTNQINYSYTPTLIQ-KLQDYIITKVVSGAYHNIAL 200
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+++ +F WG + GQ+ + +IV+V SG + + + +YS
Sbjct: 201 TNENQLFSWGRNNEGQLGLVD---------------KKIVNVFSGWNHSFFITKQNELYS 245
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
+G YG LGQG K S+ P + L+ + K+ + G ++ G ++
Sbjct: 246 FGSGLYGQLGQG-KCENSITPDKV---LYHEKD----QKIIKIACGETHSLLLSEQGQVF 297
Query: 311 MWGKNQYGQLGLG 323
G+NQ GQLGLG
Sbjct: 298 ACGENQRGQLGLG 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 54/255 (21%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G N++ QLG D + I ++ +G H+ IT
Sbjct: 205 QLFSWGRNNEGQLGLVDKK-------------------------IVNVFSGWNHSFFITK 239
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
++FG+ +GQ G+G + K H + +KI+ CG+ H+L L+E G+
Sbjct: 240 QNELYSFGSGLYGQLGQGKCENSITPDKVLYHE----KDQKIIKIACGETHSLLLSEQGQ 295
Query: 146 VYSCGWGADGQTGLGHLNNQET---PCLVRGE--IEGERIVKLSSAVDCVLAVSDKGDVF 200
V++CG GQ GLG N++ P + E E I+ ++ V ++
Sbjct: 296 VFACGENQRGQLGLGR--NKKVVLQPQYLSNENLFASESIIDIACGRFSVAITQKTQSLY 353
Query: 201 GWGNSEYGQISESEMQ-ISTPRVL----SQCKGVSR-----IVDVASGGSACTMLNDEGL 250
W GQ +++ I TP+++ SQ +G + + GG +C +L G
Sbjct: 354 AW-----GQFCDTDSNPIYTPQLVFSFNSQKEGKEQPEKNLVKKAVVGGDSCIILMKNGD 408
Query: 251 VYSWG---YGLLGQG 262
+YSWG +G GQG
Sbjct: 409 LYSWGKNQFGECGQG 423
Score = 42.0 bits (97), Expect = 0.40, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 25/193 (12%)
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+++ G GQ GL N + C+ R +S + ++ G + G+
Sbjct: 98 EIFVFGSNKYGQIGLSEKNAGKNFCIPRFCHFNIVFTSVSCGSHHSILLTQDGYAYSIGS 157
Query: 205 SEYGQISESEMQIS---TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ YGQ+ QI+ TP ++ + + I V SG L +E ++SWG GQ
Sbjct: 158 NIYGQLGADTNQINYSYTPTLIQKLQDYI-ITKVVSGAYHNIALTNENQLFSWGRNNEGQ 216
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
V + K+ ++ +G IT LY +G YGQLG
Sbjct: 217 LGLVDK---------------------KIVNVFSGWNHSFFITKQNELYSFGSGLYGQLG 255
Query: 322 LGTVEDQPFPLKV 334
G E+ P KV
Sbjct: 256 QGKCENSITPDKV 268
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 22/251 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +G+ G+ G G +++E+ + + +I CG+++T+ +T+ G++YSC
Sbjct: 29 FCWGSTIHGELGLGGIEDENI---LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSC 85
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ LGH ++ L+ G ++ K + LA+++ G +F WG++ GQ
Sbjct: 86 GNNDYGQ--LGHEKGRKRLQLIPG-LDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQ 142
Query: 210 I---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
+ S++ M+ S+PR++ G S +V +A G L + G +YSWG G LG G
Sbjct: 143 LGLNSKNFME-SSPRMVKTL-GTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGT 200
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ +KP I S G + + G AI+ G ++ WGKN +GQLGL
Sbjct: 201 DIKYEIKPKFI-SAFIG-------IPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLN 252
Query: 324 TVEDQPFPLKV 334
+D+ P ++
Sbjct: 253 DTQDRNLPCQL 263
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG T N +L+ G NS+ QLG K + + +F+ IP
Sbjct: 166 VVQIACGMKHAFALTN----NGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIP--- 218
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I +A G H+I I+ + F +G N+FGQ G D Q + + L+
Sbjct: 219 ------IAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLN-----DTQDRNLPCQLQTLQ 267
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
KI A CG++ ++FLT G V++CG G GQ G G +N+ P V E+ G + ++
Sbjct: 268 NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-ELMGSTVTQI 326
Query: 184 SSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVL 223
S LA V +G V+ WG GQ+ + S ++TP+V+
Sbjct: 327 SCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 140/324 (43%), Gaps = 35/324 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG +TVV T+ + ++ CG N QLG+ RK+ + + +FV
Sbjct: 62 EIQQIACGENYTVVITQIGE----IYSCGNNDYGQLGHEKGRKRLQLIPGLDAFV----- 112
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K A G HT+ I + F++G+N+ GQ G + + + L
Sbjct: 113 -------FKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRM----VKTL 161
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
++ CG H LT +G++YS G ++GQ GLG + + P + I G I
Sbjct: 162 GTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFI-GIPIA 220
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ +A+S G VFGWG + +GQ+ ++ Q Q ++I A G
Sbjct: 221 FIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEF 280
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP- 297
L +G V++ G YG LG G S + P + L G S V + G
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSN-SNEILPRQV-MELMG-------STVTQISCGKR 331
Query: 298 CTFGAITNFGHLYMWGKNQYGQLG 321
T + + G +Y WG GQLG
Sbjct: 332 HTLALVPSRGRVYAWGLGGAGQLG 355
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 24/274 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I+ +A G +T+VIT ++ GNN +GQ G +G+ I L+
Sbjct: 60 AAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHE-------KGRKRLQLIPGLDAFV 112
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
A CG HTL + E G+++S G +GQ GL N E+ + + +V+++
Sbjct: 113 FKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ A+++ G+++ WG++ GQ+ ++ + +I P+ +S G+ I +A GG
Sbjct: 173 MKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIK-PKFISAFIGIP-IAFIACGGYHSI 230
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
++ G V+ WG +G LG R++ Q Q +K+ G
Sbjct: 231 AISKSGAVFGWGKNTFGQLGLNDTQDRNLP---------CQLQTLQNAKICYAACGEEFS 281
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G+ ++ P +V
Sbjct: 282 VFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQV 315
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG ++ +KS +FG G N+ QLG +D + + P +L
Sbjct: 217 IPIAFIACGGYHSIAISKSG----AVFGWGKNTFGQLGLNDTQDRNLPCQLQTL------ 266
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +I + A G ++ +T + G FT G +GQ G G E + +
Sbjct: 267 ----QNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNE-----ILPRQVME 317
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL L S G+VY+ G G GQ G + TP +V G
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHG 370
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 182 KLSSAVDCVLAVS----DKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIV 233
K A + V+AV K D+F WG++ +G++ E E I PR L K + I
Sbjct: 7 KRRLASEPVIAVEYPLHKKKDMFCWGSTIHGELGLGGIEDE-NILIPRELD-FKKAAEIQ 64
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+A G + ++ G +YS G GQ + LIP G F K
Sbjct: 65 QIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAA--- 117
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
G AI +G L+ WG N GQLGL +
Sbjct: 118 -CGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147
>gi|290986924|ref|XP_002676173.1| predicted protein [Naegleria gruberi]
gi|284089774|gb|EFC43429.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 144/342 (42%), Gaps = 32/342 (9%)
Query: 4 ITDIACG-YGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
I IA G Y F + D+N KL+ G N QLG P K P+++ M +
Sbjct: 69 IAQIASGPYNFYAI-----DENGKLYSWGKNDFGQLGDRTPIDKWRPVDVFMKGALL--- 120
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ + + G HT+V+ +N ++FG+NS GQ G G V KW I
Sbjct: 121 ----NQTVTRVCGGLTHTLVLANNGMLYSFGDNSKGQLGIG-VSSSVIAKKWEPVLINFP 175
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERI 180
+ I D CG +H L L G +Y+ G GQ G + P V I +RI
Sbjct: 176 FNDTIADIQCGDNHNLVLLTGGAMYAWGLNDYGQLGDNTTTTRTKPTKVNTLSAIGPKRI 235
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR-VLSQCKGV---SRIVDVA 236
++ + + + G + WG + GQ+ + + I PR V KG+ ++ V
Sbjct: 236 EQIGAGGYTFYVIDENGKAYAWGRNNRGQLGD-KTTIDKPRPVDVYMKGILLNQTVIRVC 294
Query: 237 SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G S +L + + G YG LG G M+PT + +FN + +
Sbjct: 295 GGESHTLLLTSNNELAAMGDNTYGQLGVGTSGGYKMEPTRV------NIKFN--GTIMDI 346
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G +T+ G +Y WG+N GQLG G D+ P ++
Sbjct: 347 QCGENYNLVLTSKGLVYGWGRNDVGQLGSGDKLDKLEPTLIS 388
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 20/290 (6%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+ LPV+ + I +++ D + +++G N +G G K F
Sbjct: 4 LDLPVELKNVTILQFTNSYYGNLLLAD-DAVYSWGKNDYGVDADGTTVNHYQPRKVFSW- 61
Query: 119 IADLEGEKIMDAVCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPC--LVRGEI 175
DL+G K + + + + + E+GK+YS G GQ G ++ P ++G +
Sbjct: 62 --DLQGPKGIAQIASGPYNFYAIDENGKLYSWGKNDFGQLGDRTPIDKWRPVDVFMKGAL 119
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQCKGVSR 231
+ + ++ + L +++ G ++ +G++ GQ +S S + VL
Sbjct: 120 LNQTVTRVCGGLTHTLVLANNGMLYSFGDNSKGQLGIGVSSSVIAKKWEPVLINFPFNDT 179
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I D+ G + +L G +Y+WG YG LG +R+ + + G PK
Sbjct: 180 IADIQCGDNHNLVLLTGGAMYAWGLNDYGQLGDNTTTTRTKPTKVNTLSAIG-----PK- 233
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
++E + AG TF I G Y WG+N GQLG T D+P P+ V + G
Sbjct: 234 RIEQIGAGGYTFYVIDENGKAYAWGRNNRGQLGDKTTIDKPRPVDVYMKG 283
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
A GY F V+ D+N K + G N+ QLG K P+++ M + + +
Sbjct: 240 AGGYTFYVI-----DENGKAYAWGRNNRGQLGDKTTIDKPRPVDVYMKGILL-------N 287
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ + G +HT+++T N G+N++GQ G G Y+ + NI G I
Sbjct: 288 QTVIRVCGGESHTLLLTSNNELAAMGDNTYGQLGVGT--SGGYKMEPTRVNIK-FNGT-I 343
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
MD CG+++ L LT G VY GWG + GQ G G ++ P L+ ++ +VK+ +
Sbjct: 344 MDIQCGENYNLVLTSKGLVY--GWGRNDVGQLGSGDKLDKLEPTLIS-YLKNSTVVKIYA 400
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI 210
A++++ ++ WGN+ Q+
Sbjct: 401 RFSTSFALTNESFLYAWGNNNQYQL 425
>gi|301625970|ref|XP_002942173.1| PREDICTED: protein RCC2 homolog [Xenopus (Silurana) tropicalis]
Length = 456
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 40/274 (14%)
Query: 68 TQIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
Q++ +A G AH+++IT +++G N GQ G G V+ D I L+GE
Sbjct: 139 VQVRTVAAGPCAAHSLLITVEGKLWSWGRNDKGQLGHGDVKRIDVP-----KLIESLKGE 193
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ CG++HTL LTE+G VY+ G GQ GLG+ P + G+ I K++
Sbjct: 194 VFVHGACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVAC 252
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR----------- 231
+ + + KG+++ +G EYGQ+ S+ + R+ C+ ++R
Sbjct: 253 GAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKD 312
Query: 232 ----------IVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSR-SMKPTLIPSTLF 279
+ D+A G + +L+ + V+SWG+G G+ G R M P L+ LF
Sbjct: 313 GQVLPVPNVVVRDIACGINHSLVLDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLV--KLF 370
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 371 ---DFPGRGASQIYAGATCSF-AVSEMGGLFFWG 400
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 41/268 (15%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
ACG T+ T+ N ++ G N QLG GN + V S P + +
Sbjct: 199 ACGRNHTLALTE----NGSVYAFGENKMGQLGL------GNKTDAVPS----PAQILYNG 244
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFCHNIA 120
I +A G ++++ ++FG +GQ G Q +Y + IA
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 121 D-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+E K + D CG +H+L L +V+S G+G G+ G ++ P
Sbjct: 305 IFIEKTKDGQVLPVPNVVVRDIACGINHSLVLDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
Query: 169 CLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
LV+ + G ++ + C AVS+ G +F WG + + +S M T + L K
Sbjct: 365 RLVKLFDFPGRGASQIYAGATCSFAVSEMGGLFFWGATNTSR--DSTMYPKTVQDLCGWK 422
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG 255
+ ++A G S+ + DE + SWG
Sbjct: 423 ----VRNLACGKSSIILAADESTI-SWG 445
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVAS 237
R V L ++ +G ++ WG ++ GQ+ ++ +I P+++ KG V A
Sbjct: 142 RTVAAGPCAAHSLLITVEGKLWSWGRNDKGQLGHGDVKRIDVPKLIESLKG-EVFVHGAC 200
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G + L + G VY++G +GQ + K +PS + P +KV A
Sbjct: 201 GRNHTLALTENGSVYAFGENKMGQ---LGLGNKTDAVPSPAQILYNGQPITKV----ACG 253
Query: 298 CTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLG 278
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C ++ VA+G A
Sbjct: 94 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLTGVQVRTVAAGPCAAHS 153
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G V R P LI S K E + G C
Sbjct: 154 LLITVEGKLWSWGRNDKGQLGHG-DVKRIDVPKLIESL-----------KGEVFVHGACG 201
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G +Y +G+N+ GQLGLG D P P ++ GQ
Sbjct: 202 RNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQ 245
>gi|296189260|ref|XP_002742707.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Callithrix
jacchus]
Length = 547
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 120/287 (41%), Gaps = 35/287 (12%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGD----------------VFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVA 236
+ G+ VF WG + GQ+ S S TPR ++ C + R+V +A
Sbjct: 144 AADGEFRVAGGHSLSGSSGYQVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIA 203
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G ++ + D G VY WGY G LG G ++ L P + H V +
Sbjct: 204 CGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQI 254
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+ G A+T+ G LY WG N YGQLG G + P + V ++
Sbjct: 255 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKER 301
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 144/332 (43%), Gaps = 52/332 (15%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLCG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGVAPIQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESG----------------KVYSCGWGADGQTGLGHLNNQETPCL 170
+++ CG H++ L G +V++ G+ GQ G G NQ TP
Sbjct: 130 VVEVACGSHHSMALAADGEFRVAGGHSLSGSSGYQVFAWGYNNCGQVGSGSTANQPTPRK 189
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCK 227
V + +R+V ++ +AV D G+V+GWG + GQ + + Q++ RV +
Sbjct: 190 VTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSV 249
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
V++IV G + L DEGL+Y+WG YG LG G K + + P H
Sbjct: 250 CVNQIV---CGYAHTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIM 296
Query: 285 NPKSKVESLIA--GPCTFGAITNFGHLYMWGK 314
K +V + A T A T GH+YMWG+
Sbjct: 297 VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 328
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ G G N+ G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQLGHGREGNKPEQI---GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKDFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 224 LSDEEDRESPCHVKL 238
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---GREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+Y+ G GA GQ G GH N + P V+G R +LS+ D +F G+
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHR-GQLSATAD-RFKYHIVKQIFSGGD 372
Query: 205 SEYGQISESEMQISTP----RVLSQCKGVSRIVD 234
+ S+ E S+P R+++Q S I D
Sbjct: 373 QTFVLCSKYEN--SSPAVDFRIMNQAHYTSLIND 404
>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 541
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 25/254 (9%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+++T+++ + G+N+ G G G Q Y K I +L G+ I G+ H L
Sbjct: 37 LIVTNDKMVYAVGSNTSGCLGTGDTQSTLYPKK-----IKELCGKDIKTFAYGKGPHVLA 91
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
LT+ GKVYS WG + LG+ + TP ++ + E IV ++ LA+++ G
Sbjct: 92 LTKEGKVYS--WGQNCHYELGNTFGSQALTPAIITN-LCNEFIVDVACGSHHSLALTNDG 148
Query: 198 DVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+V+ WG + GQ+ ++ PR L+ +++ ++ G S ++ + G VYSW
Sbjct: 149 EVYAWGQNTSGQVGCHDITTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSW 208
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG + P I + K +E ++ G A+++ G LY+
Sbjct: 209 GRNDVGQLGIENNNNDQFHPCRITAL--------TKVVIEKVVCGSIHTLALSDEGVLYV 260
Query: 312 WGKNQYGQLGLGTV 325
WG N YGQLGL TV
Sbjct: 261 WGANNYGQLGLTTV 274
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK A G+ H + +T +++G N + G + I +L E I+
Sbjct: 78 IKTFAYGKGPHVLALTKEGKVYSWGQNCHYELGNTFGSQALTPAI-----ITNLCNEFIV 132
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN--QETPCLVRGEIEGERIVKLSSA 186
D CG H+L LT G+VY+ G GQ G + Q+ P + + G++++ +S
Sbjct: 133 DVACGSHHSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKLNFTLTGKKVICISCG 192
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ V++ G+V+ WG ++ GQ+ + + Q R+ + K V I V G
Sbjct: 193 DSFSVVVTNNGEVYSWGRNDVGQLGIENNNNDQFHPCRITALTKVV--IEKVVCGSIHTL 250
Query: 244 MLNDEGLVYSWG---YGLLG 260
L+DEG++Y WG YG LG
Sbjct: 251 ALSDEGVLYVWGANNYGQLG 270
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 41/225 (18%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL------- 122
I +A G H++ +T++ + +G N+ GQ G CH+I L
Sbjct: 131 IVDVACGSHHSLALTNDGEVYAWGQNTSGQVG--------------CHDITTLVQDIPRK 176
Query: 123 -----EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGEIE 176
G+K++ CG ++ +T +G+VYS G GQ G+ + NN Q PC + +
Sbjct: 177 LNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGRNDVGQLGIENNNNDQFHPCRITA-LT 235
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST----PRVLSQCKGVSRI 232
I K+ LA+SD+G ++ WG + YGQ+ + + ++T P L + + R+
Sbjct: 236 KVVIEKVVCGSIHTLALSDEGVLYVWGANNYGQLGLTTVLLNTNIWKPTKL-EVPEMRRV 294
Query: 233 VDVASG--GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP 275
+D+A+ L + ++ WG LGQ KV PTL P
Sbjct: 295 LDIATSYYNYISIALCEGNRIFMWG-QCLGQNVKV-----PTLTP 333
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV-DCVLAV 193
+ L +T VY+ G G G G + P ++ E+ G+ I + VLA+
Sbjct: 34 NEALIVTNDKMVYAVGSNTSGCLGTGDTQSTLYPKKIK-ELCGKDIKTFAYGKGPHVLAL 92
Query: 194 SDKGDVFGWG-NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ +G V+ WG N Y + Q TP +++ IVDVA G L ++G VY
Sbjct: 93 TKEGKVYSWGQNCHYELGNTFGSQALTPAIITNLCN-EFIVDVACGSHHSLALTNDGEVY 151
Query: 253 SWGYGLLGQ--GPKVSRSMK--PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+WG GQ ++ ++ P + TL G+ KV + G +TN G
Sbjct: 152 AWGQNTSGQVGCHDITTLVQDIPRKLNFTLTGK-------KVICISCGDSFSVVVTNNGE 204
Query: 309 LYMWGKNQYGQLGL-GTVEDQPFPLKVA 335
+Y WG+N GQLG+ DQ P ++
Sbjct: 205 VYSWGRNDVGQLGIENNNNDQFHPCRIT 232
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 140/337 (41%), Gaps = 39/337 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +++CG+ T K ++ CG N QLG + + +F
Sbjct: 37 VREVSCGWNHTAFLCKDG----TVYTCGSNEFGQLGQEKSHTNPESVHAIETFT------ 86
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I + G+AHT+ ++D F +G+NS+GQ G G +E Q + L
Sbjct: 87 ------ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQT--IPKMLKGLA 138
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
++ CG +H++ LT SG ++ G + GQ G+G ++ + + G + +
Sbjct: 139 KMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLI 198
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
S+ A+S G +FGWG +EYGQ+ + L + + V+ G
Sbjct: 199 SAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTA 258
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK-------SKVESLIAG 296
+L +G V+++G G GQ S H++ P+ S V + G
Sbjct: 259 VLTSDGGVFTFGCGTSGQLGHNS-------------NHHEYTPRKVFELMGSVVTQIACG 305
Query: 297 PC-TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
T + + G +Y +G+ GQLGLG + P+
Sbjct: 306 RAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPM 342
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LFG G N QLG HD + PL ++ +R S + +++ G HT V+T +
Sbjct: 214 LFGWGKNEYGQLGVHDTTDR--PLPTLLKSLR--------SQGVCYVSCGEKHTAVLTSD 263
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT-ESGK 145
G FTFG + GQ G E K F +L G + CG+ HTL L SG+
Sbjct: 264 GGVFTFGCGTSGQLGHNSNHHEYTPRKVF-----ELMGSVVTQIACGRAHTLALVPSSGR 318
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG-------------EIEGERIVKLSSAVD---- 188
VY+ G G DGQ GLG NN +P +G E +G+ +V +D
Sbjct: 319 VYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYTVRRIDAGGD 378
Query: 189 -CVLAVSDKGD-VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
C S GD G + + S+S + +S P + K + D++
Sbjct: 379 HCFAMASSYGDETDGPEDMRLPRPSQSILHLSVPVTMDLVKRATIASDLS 428
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 28/277 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S+ ++ ++ G HT + + +T G+N FGQ G QE+ + H I E
Sbjct: 34 SSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLG----QEKSHTNPESVHAI---ETFT 86
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL---NNQETPCLVRGEIEGERIVKL 183
I CG+ HT+ +++ G V++ G + GQ GLG Q P +++G + +V++
Sbjct: 87 ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKG-LAKMSVVQI 145
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ + +A++ G +F WG++ GQ I ++ +S P + GV ++ +++GG+
Sbjct: 146 ACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFML-ISAGGAH 204
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK-VESLIAGP 297
L+ G ++ WG YG LG R + PTL+ S +S+ V + G
Sbjct: 205 SFALSSSGALFGWGKNEYGQLGVHDTTDRPL-PTLLKSL---------RSQGVCYVSCGE 254
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ G ++ +G GQLG + + P KV
Sbjct: 255 KHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKV 291
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 199 VFGWGNSEYGQ--ISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
+F WG GQ + E+E + ISTPR+L + S + +V+ G + L +G VY+ G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
+G LGQ K P ++ F + + G A+++ G ++ W
Sbjct: 61 SNEFGQLGQE-------KSHTNPESVHAIETFT----ITKVTCGKAHTVAVSDQGLVFAW 109
Query: 313 GKNQYGQLGLGT 324
G N YGQ+GLG+
Sbjct: 110 GDNSYGQIGLGS 121
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 33/266 (12%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKW------FCHNIADLEGEKIMDAVCGQDHTLFLTE 142
A + GN G+ G G +E + G W + H + + + G H++FL
Sbjct: 27 ALSAGNGDHGRLGHG-SPDEAHDG-WSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVA 84
Query: 143 SGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
G V++CG ADGQ LGH L P LVR ++E +V +++ L V G V
Sbjct: 85 GGHVFTCGLNADGQ--LGHSAGLPFSPEPMLVRLDVE---VVSVAAGNGHTLCVDVDGCV 139
Query: 200 FGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY--- 256
+ +G + GQ+ + + PR + +R+ VA G + D+G VYSWG
Sbjct: 140 WAFGKNTAGQLGTGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTD 199
Query: 257 GLLGQGPKV------SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
G+LG G + R+ + L P + + KV ++ AG I + G+LY
Sbjct: 200 GVLGHGSETWNDGWFYRTARAELAPRLV----RSLEDKKVVAVAAGHMHSACIDDRGNLY 255
Query: 311 MWGKNQYGQLGLGTV----EDQPFPL 332
WG+ ++ QLGL E P P+
Sbjct: 256 TWGQGRFNQLGLSAKPSDHETTPSPV 281
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 139/340 (40%), Gaps = 55/340 (16%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F CGLN+D QLG+ G P VR+ + ++ +A G HT+ + +
Sbjct: 88 VFTCGLNADGQLGH----SAGLPFSPEPMLVRLDV-------EVVSVAAGNGHTLCVDVD 136
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-KIMDAVCGQDHTLFLTESGK 145
+ FG N+ GQ G G V I L E ++ CG +H+L + + G+
Sbjct: 137 GCVWAFGKNTAGQLGTGNVDGT------IPRKIGALAKEARVAQVACGAEHSLAVADDGR 190
Query: 146 VYSCGWGADGQTGLGH-----------LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
VYS G DG G G + P LVR +E +++V +++ +
Sbjct: 191 VYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVR-SLEDKKVVAVAAGHMHSACID 249
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
D+G+++ WG + Q+ S S + + ++A GG ++ N V SW
Sbjct: 250 DRGNLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGG-LHSLANTNAGVVSW 308
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G +G LG G +K + G ++ L AG I N G L+
Sbjct: 309 GANQHGELGHGHH--SDIKSAVPKPIKMGSRGWS------KLAAGWKHSAGIAN-GKLFA 359
Query: 312 WG------------KNQYGQLGLGTVEDQPFPLKVAVGGQ 339
WG + GQLGLG D P +V+V G+
Sbjct: 360 WGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVSVPGE 399
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 45/289 (15%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR--GIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G AH++ + FT G N+ GQ G G+ + + L+ E
Sbjct: 68 DVRAVAAGGAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPM-------LVRLDVE- 119
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ G HTL + G V++ G GQ G G+++ P + + R+ +++
Sbjct: 120 VVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGT-IPRKIGALAKEARVAQVACG 178
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQIS------------TPRVLSQCKGVSRIVD 234
+ LAV+D G V+ WG+S G + + PR++ + ++V
Sbjct: 179 AEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLED-KKVVA 237
Query: 235 VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK----- 289
VA+G ++D G +Y+WG G Q + S KP+ H+ P
Sbjct: 238 VAAGHMHSACIDDRGNLYTWGQGRFNQ---LGLSAKPS--------DHETTPSPVMSLRF 286
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED----QPFPLKV 334
V + G A TN G + WG NQ+G+LG G D P P+K+
Sbjct: 287 VHEIACGGLHSLANTNAG-VVSWGANQHGELGHGHHSDIKSAVPKPIKM 334
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E++ + LE + V G ++L + + GK+++
Sbjct: 8 IAWGSGEDGQLGLGTDEEKE-----LASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTW 62
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + TP LV+ + +IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPPETKTESTPSLVK-SLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQISESEMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
YGQ E + T R + +C + VA+GG+ +L EG V++WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
P +K +P + G V + G A+ G L+ WG N+YGQ
Sbjct: 177 ---PWPPGDIKQISVPVRVQGL------ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQ 227
Query: 320 LGLGTVEDQPFPLKV 334
LG G + + +P+ V
Sbjct: 228 LGTGDTQPRSYPIPV 242
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 28/317 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G N LG+ K + LV S + +I A G H + + D
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANV---------KIVQAAIGGWHCLAVDD 108
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD----LEGEKIMDAVCGQDHTLFLT 141
A+ +G N +GQCG ++E G+ +I + + G H++ LT
Sbjct: 109 QGRAYAWGGNEYGQCGEEPSKDE--TGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V++ WG G + P V+G +E R++ + + + LA+ + G ++
Sbjct: 167 REGYVWT--WGQPWPPG--DIKQISVPVRVQG-LENVRLIAVGAFHN--LALKEDGTLWA 219
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
WGN+EYGQ+ + Q + + Q +VD+A+GG T L +EG VY WG G G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + + + G A+T G ++ +G+ +G+LG
Sbjct: 280 LGFGDNDKSSKMLPQKV----NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Query: 322 LG--TVEDQPFPLKVAV 336
G QP L + +
Sbjct: 336 YGRKVTTGQPLELPIHI 352
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 114/242 (47%), Gaps = 20/242 (8%)
Query: 95 NSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD 154
NS+GQ G G V++ G C + A L+ + + G HT +TE G+V+ CG
Sbjct: 3 NSYGQLGHGGVEDRPVPG--LC-DAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHR 59
Query: 155 GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE 214
GQ GLGHL + T L R + + ++ D L ++D G V G++ +GQ+ +
Sbjct: 60 GQLGLGHLTDIST--LQRCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQ 117
Query: 215 MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLI 274
T V + +V VA+G + D G VY WG GL+ Q R++ P+ +
Sbjct: 118 KPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQWGIGLMSQ---AKRTLSPSPV 174
Query: 275 PSTLFGQHQ-----FNPK-SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
PS L N K S+V + AG +T G L++WG N++ QL + +
Sbjct: 175 PSHLSSVLPSLVPGLNQKMSRV--VAAGSMHCVCLTENGDLFLWGSNKHSQL----LSSE 228
Query: 329 PF 330
PF
Sbjct: 229 PF 230
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 37/268 (13%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G HT VIT++ F G N GQ G G D C + + + +
Sbjct: 32 VRVVTGGGGHTAVITEDGEVFVCGQNHRGQLGLG--HLTDISTLQRCLGLT----QTVTN 85
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG D TLFLT+SG+V SCG A GQ G+G + ++ +V +++ +
Sbjct: 86 VTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKPAYTADVQIVESLKAA-VVSVAAGLRH 144
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV------------SRIVDVAS 237
LAV+D G V+ WG G +S+++ +S V S V SR+ VA+
Sbjct: 145 SLAVTDSGCVYQWG---IGLMSQAKRTLSPSPVPSHLSSVLPSLVPGLNQKMSRV--VAA 199
Query: 238 GGSACTMLNDEGLVYSWGYG----LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G C L + G ++ WG LL P +S PT + +L G V +
Sbjct: 200 GSMHCVCLTENGDLFLWGSNKHSQLLSSEPFLS---SPTPVERSLLG------GETVLRV 250
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+G A T G ++ WG+ YGQLG
Sbjct: 251 WSGWTHIVAQTETGRVFTWGRGNYGQLG 278
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 52/301 (17%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T++ CG+ FT+ T S ++ CG N+ QLG +++V S
Sbjct: 83 VTNVTCGWDFTLFLTDSG----RVLSCGSNAFGQLGIGQKPAYTADVQIVESL------- 131
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCHNIAD 121
+ +A G H++ +TD+ + +G Q R + + +
Sbjct: 132 ---KAAVVSVAAGLRHSLAVTDSGCVYQWGIGLMSQAKRTLSPSPVPSHLSSVLPSLVPG 188
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ---ETPCLV-RGEIEG 177
L + G H + LTE+G ++ WG++ + L L+++ +P V R + G
Sbjct: 189 LNQKMSRVVAAGSMHCVCLTENGDLFL--WGSNKHSQL--LSSEPFLSSPTPVERSLLGG 244
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--------------SEMQISTPRVL 223
E ++++ S ++A ++ G VF WG YGQ+ + ++ P +
Sbjct: 245 ETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTTEDQEVRLPEEV 304
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQG-------PKVSRSMKPTL 273
+G ++I + GS + G + SWG+ G+ G G P++ +++P L
Sbjct: 305 PALQGATQI----TCGSEHNLAILGGRLLSWGWNEHGMCGDGSHADVFQPQLVPALRPLL 360
Query: 274 I 274
I
Sbjct: 361 I 361
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 224 LSDEEDRESPCHVKL 238
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V+ WG GQ + + L KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 22/252 (8%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
+H + +T +++GN FG+ G G D I +L G+ +++ CG H+
Sbjct: 488 SHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSP-----MLINELHGKSVVNVACGSHHS 542
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++++ G G+ G+ GLG + TP LV G + G +V ++ S +A++D
Sbjct: 543 AAITASGELFTWGRGSFGRLGLGSTEDILTPALVSG-LLGVTVVDVACGSGDAQTIALAD 601
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ WG+ EYG++ + P+++ + +G+ + V G + G V++W
Sbjct: 602 TGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLD-VTRVYCGPQYSAAVCKNGAVFTW 660
Query: 255 GYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G + + TL G+H V SL G A T G L
Sbjct: 661 GNGEGYKLGHGTEEHVRFPRQV--ETLAGKH-------VTSLSLGSHHCLATTEEGELLS 711
Query: 312 WGKNQYGQLGLG 323
WG+N GQLG G
Sbjct: 712 WGRNDKGQLGEG 723
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 45/313 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
KLF CG ++ +LG L +S +P P + S IK +A +G H
Sbjct: 2967 KLFACGEATNGRLG------------LGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHA 3014
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ +T + F++G G+ G + + C I L +++ D CG H+
Sbjct: 3015 MALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALRSKRVRDIACGGSHS 3066
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK--LSSAVDCVLAVSD 195
+ +G +Y+ G G G+ G G Q P LV+ +EG+R+++ L S LA++D
Sbjct: 3067 AAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKA-LEGQRVIQVALGSRDAQTLALTD 3125
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ WG+ ++G++ + S P + + GV + + G L G V++W
Sbjct: 3126 SGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVG-VCQIECGAQFSLALTKSGQVWTW 3184
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G + KP L+ TL G+ KV + G ++ + G +Y
Sbjct: 3185 GKGDYFRLGHGTD-AHVRKPQLV-ETLKGK-------KVTHVAVGALHCLSVLDNGQVYA 3235
Query: 312 WGKNQYGQLGLGT 324
WG N +GQ G T
Sbjct: 3236 WGDNDHGQQGNST 3248
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 27/287 (9%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I L
Sbjct: 4018 IQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRP-----RAIESL 4072
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G++++D G H+ +T +G++YS G G G+ G G +Q P LV ++G R+
Sbjct: 4073 RGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDA-LKGYRVTD 4131
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L ++D V+ WG+ +YG++ P + +G+ ++ V G
Sbjct: 4132 VACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLG-VIKVECGS 4190
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPK--VSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
L G VY+WG Y LG G + + R + T TL G+ K+ S+
Sbjct: 4191 QFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCT----TLQGK-------KIVSIA 4239
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G A T+ G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4240 CGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4286
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 117 HNIADLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
H I+ L +I+ + H L LT G VYS G G G+ G G ++P L+ E
Sbjct: 468 HEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLI-NE 526
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIV 233
+ G+ +V ++ A++ G++F WG +G++ S I TP ++S GV+ +V
Sbjct: 527 LHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVT-VV 585
Query: 234 DVA--SGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
DVA SG + L D G VYSWG YG LG+G S K + L G
Sbjct: 586 DVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGG--SEGCKAPKLVDKLQGL------- 636
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V + GP A+ G ++ WG + +LG GT E FP +V
Sbjct: 637 DVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQV 682
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
+ G +LF +T+ GK+++CG +G+ GLG ++ P + + ++K + S
Sbjct: 2952 IVGGSKSLFCVTQDGKLFACGEATNGRLGLG-ISAGNVPQPRQLTSLSQYVIKKVAVHSG 3010
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ + R+ D+A GGS +
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRS-KRVRDIACGGSHSAAI 3069
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ ++P L+ + L GQ +L + A
Sbjct: 3070 ISNGDLYTWGLGEYGRLGHGDNTTQ-LRPKLVKA-LEGQRVIQV-----ALGSRDAQTLA 3122
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVE--DQPFPLK 333
+T+ G +Y WG +G+LG G E P P++
Sbjct: 3123 LTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIE 3155
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 22/240 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ DIACG + + D L+ GL +LG+ D + P +LV +
Sbjct: 3055 RVRDIACGGSHSAAIISNGD----LYTWGLGEYGRLGHGDNTTQLRP-KLVKAL------ 3103
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +TD+ +++G+ FG+ GRG +G H I
Sbjct: 3104 ---EGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRG-----GSEGCSVPHPIE 3155
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G + CG +L LT+SG+V++ G G + G G + P LV ++G+++
Sbjct: 3156 RLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVE-TLKGKKV 3214
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ L+V D G V+ WG++++GQ S ++ L Q +I VA G S
Sbjct: 3215 THVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSS 3274
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 105/257 (40%), Gaps = 31/257 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ ++A G H+ IT + FT+G SFG+ G G ED ++ L G ++D
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLG--STEDILTPAL---VSGLLGVTVVD 586
Query: 130 AVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
C G T+ L ++G VYS G G G+ G G + P LV +++G + ++
Sbjct: 587 VACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLV-DKLQGLDVTRVYCGP 645
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
AV G VF WGN E ++ +E + PR + G + ++ G C
Sbjct: 646 QYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAG-KHVTSLSLGSHHCLATT 704
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+EG + SWG G LG+G +P S L G C G
Sbjct: 705 EEGELLSWGRNDKGQLGEG-HTGLKAEPAFAASLL-----------------GKCIIGIT 746
Query: 304 TNFGHLYMWGKNQYGQL 320
+ + W + G +
Sbjct: 747 CSSAQTFAWSRPSRGTM 763
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 132/325 (40%), Gaps = 38/325 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP-LELVMSFVRIPLPVKH 65
+ CG G KD ++F GLN QLG K P + +S ++
Sbjct: 2903 VKCGSGV-------KDIQTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKC------ 2949
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ G +T + F G + G+ G GI Q + +++ +
Sbjct: 2950 -----VQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLT-SLSQYVIK 3003
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
K+ G H + LT GKV+S G G DG+ G N + P L+ + +R+ ++
Sbjct: 3004 KVA-VHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LRSKRVRDIAC 3061
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG--SAC 242
A+ GD++ WG EYG++ + P+++ +G R++ VA G +
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEG-QRVIQVALGSRDAQT 3120
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L D G VYSWG +G LG+G S+ + G Q G
Sbjct: 3121 LALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIE---------CGAQF 3171
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGT 324
A+T G ++ WGK Y +LG GT
Sbjct: 3172 SLALTKSGQVWTWGKGDYFRLGHGT 3196
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYSCG 150
+G+N GQ G V+ + C +A + +++ G + TLF +T GKV + G
Sbjct: 3941 WGHNHRGQLGG--VEGAKVKLPVSCETLATMRPVQLI----GGEQTLFSITGDGKVCATG 3994
Query: 151 WGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
+GA G+ G+G ++ TP L+ + R V ++S LA+S +G+V+ WG E G+
Sbjct: 3995 YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGK 4054
Query: 210 ISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
+ + PR + +G +VD+A+GG+ + G +YSWG YG LG G
Sbjct: 4055 LGHGNRSPCDRPRAIESLRG-KEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSE 4113
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
++ KP L+ L G + +G IT+ ++ WG YG+LG G
Sbjct: 4114 DQT-KPKLV-DALKGYRVTDVACG-----SGDAQTLCITDDDSVWSWGDGDYGKLGRGGS 4166
Query: 326 EDQPFPLKV 334
+ P+K+
Sbjct: 4167 DGCKVPMKI 4175
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 116 CHNIADL-----EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
CHN + + I+ C + L L +G+VY A+ Q+ E L
Sbjct: 420 CHNTPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQS------MHEISTL 473
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV 229
+IE ++ S C LA++ +GDV+ WGN ++G++ + + +P ++++ G
Sbjct: 474 --ADIEIIKLAAHSEGSHC-LALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGK 530
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
S +V+VA G + G +++WG +G LG G + P L+ S L G +
Sbjct: 531 S-VVNVACGSHHSAAITASGELFTWGRGSFGRLGLG-STEDILTPALV-SGLLGVTVVDV 587
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+G A+ + G +Y WG +YG+LG G E
Sbjct: 588 ACG-----SGDAQTIALADTGSVYSWGDGEYGKLGRGGSE 622
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG+++ GWG + + LG + + V E + R V+L + ++
Sbjct: 3927 DWTLSWGGSGQIW--GWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSI 3984
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLV 251
+ G V G G++ ++TP ++ + V R V + SGG C L+ EG V
Sbjct: 3985 TGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEV 4044
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P I S L G+ +V + AG IT+ G
Sbjct: 4045 YSWGEGEDGKLGHGNR-SPCDRPRAIES-LRGK-------EVVDIAAGGAHSACITSTGE 4095
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
LY WGK +YG+LG G EDQ P
Sbjct: 4096 LYSWGKGRYGRLGHGDSEDQTKP 4118
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC 226
TP + + + I++++ + + +L + G V+ NS Q S +IST +
Sbjct: 423 TPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQ---SMHEISTLADIEII 479
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
K + S GS C L EG VYSWG +G LG G V+ P LI + L G+
Sbjct: 480 K-----LAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCD-SPMLI-NELHGKSV 532
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
N + G AIT G L+ WG+ +G+LGLG+ ED P V+
Sbjct: 533 VN-------VACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVS 577
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVL-SQCKGVSRIVDVASGGSACTMLN 246
+ V+ G +F G + G++ S + PR L S + V + V V SGG L
Sbjct: 2959 LFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALT 3018
Query: 247 DEGLVYSWGYGLLGQGPKVSRSM--KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V+SWG G G+ SR KP LI + +V + G AI
Sbjct: 3019 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALR--------SKRVRDIACGGSHSAAII 3070
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G LY WG +YG+LG G Q P L A+ GQ+
Sbjct: 3071 SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQR 3107
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++TD+ACG G + D ++ +G G G D K +P
Sbjct: 4128 RVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCK---------------VP 4172
Query: 63 VKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+K + Q + + G ++ +T + +T+G + + G G ED+ +
Sbjct: 4173 MKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGT---EDHIRR--PRRC 4227
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L+G+KI+ CG H + T++G+VY+ G +GQ G G N + P LV ++G++
Sbjct: 4228 TTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKK 4286
Query: 180 IVKLS 184
I +++
Sbjct: 4287 INRVA 4291
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 21/159 (13%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ + G ++ + N FT+GN + G G EE + F + L G+ +
Sbjct: 638 VTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGT--EEHVR---FPRQVETLAGKHVTS 692
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H L TE G++ S G GQ G GH + P + G+ C
Sbjct: 693 LSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFA-ASLLGK----------C 741
Query: 190 VLAVS-DKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
++ ++ F W G + + + P V+ C+
Sbjct: 742 IIGITCSSAQTFAWSRPSRGTM----IPMRIPFVVDVCR 776
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 143/345 (41%), Gaps = 37/345 (10%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFV 57
+ ++ IACGY T + T D++L FG CG +LG+ + P+ V F
Sbjct: 1742 LRRVVQIACGYRHTALITD--DRHLYTFGHGECG-----RLGHGNQEDCTEPVS-VGYFT 1793
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ + ++ GR HT+ +T + F FG G+ G G Y +
Sbjct: 1794 SLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTR---- 1849
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ DL+ I CG++HTL LT G+V++ G G G+ G G ++E P V+G +E
Sbjct: 1850 -VTDLQN--IAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQG-LED 1905
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVL------------- 223
RI + + A+S +GDV WG G + + PR +
Sbjct: 1906 YRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEE 1965
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
+Q S + +A G +G +Y WG GQ V P ++ L Q
Sbjct: 1966 NQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQ-LSVEYITAPEMV--VLTPQRI 2022
Query: 284 FNP-KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
P S + S+ G T TN GHL++WG G V+D
Sbjct: 2023 RVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDD 2067
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 19/272 (6%)
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCHNI--A 120
P ++ +A G HT +ITD+ +TFG+ G+ G G ++ E +F I
Sbjct: 1740 RPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAE 1799
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
++ +++ CG++HT+ +T SG ++ GWG G+ G G + P V + + I
Sbjct: 1800 GVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRV---TDLQNI 1856
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
++ + LA++ KG VF +G G++ SE P + + RI + +G
Sbjct: 1857 AAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDY-RIAAIDAGE 1915
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFG------QHQFNPKSKV 290
L+ EG V +WG+ G LG G + ++P I G ++Q + S V
Sbjct: 1916 CHSCALSTEGDVLTWGFGSSGALGHGDR-DNCLEPRRIEGPWTGNAIDGEENQASETSVV 1974
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
++ G A T+ G LY WG GQL +
Sbjct: 1975 SAIACGSYHTLAATSDGALYGWGDAAAGQLSV 2006
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 56/356 (15%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M+ +T+I+ G + TK + +F G S +LG+ +P ++V S
Sbjct: 304 MLDVTNISLGRKHAALITKRGE----VFCWGEGSRGKLGHKVDMDVSSP-KMVESL---- 354
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+K +A G T +TD+ + +G N +G + EE + +W I+
Sbjct: 355 -----DGVHVKSVACGEYQTCALTDSGELYAWGENKYGA---NLGCEERSRSQWLPRRIS 406
Query: 121 -DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G I++ CG HT ++ SG++++ G G+ G G G+L + P E+E +
Sbjct: 407 GPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQP----KEVESLK 462
Query: 180 IVKLSSAVDC--------VLAVSDK-------GDVFGWGNSEYGQISESEMQISTPRVLS 224
+ L +V C V + D+ G +F WG+ + G++ ++++ ++L
Sbjct: 463 GL-LVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLE---KKLLP 518
Query: 225 QCKGVSRIVD-----VASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTL 278
C V+++V+ V+ G L + G VY+ G + GQ G ++ ++ L
Sbjct: 519 TC--VAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKL 576
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ +F V+ + +G A+T+ G LY WGK GQLGLG VED+ FP V
Sbjct: 577 --KEEF-----VKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLV 625
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 24/231 (10%)
Query: 122 LEGEKIMDAV---CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
LE ++D G+ H +T+ G+V+ G G+ G+ G + +P +V ++G
Sbjct: 299 LESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVES-LDGV 357
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQCKGVSRIVD 234
+ ++ A++D G+++ WG ++YG S Q R+ GV I++
Sbjct: 358 HVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVC-ILN 416
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQF 284
VA G +++ G ++++G +G+LG G PK S+K L+ S G
Sbjct: 417 VACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWH- 475
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + +I F + G L+ WG G+LG +E + P VA
Sbjct: 476 --TAAIVDIIVDRFKFNGVG--GKLFTWGDGDKGRLGHADLEKKLLPTCVA 522
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 140/336 (41%), Gaps = 33/336 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ +ACG G V+A S K +F G S QLG+ D +++ L
Sbjct: 50 ISMLACG-GAHVIALTSGGK---VFTWGRGSSGQLGHGD----------ILNITLPKLVS 95
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ I A G +H+ ++D+ FT GN SFGQ G G K ++
Sbjct: 96 FFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAK-----VSHFN 150
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIV 181
+ + CG H+L L +V G G GQ G + + PC+V G ++ +V
Sbjct: 151 NDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSG-LKDVEVV 209
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++S+ D A+S G F WG G Q S P LS +VA G +
Sbjct: 210 RISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQ-SLPSPLS-------FREVAVGWNH 261
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+L +G V+ G L Q K + + LF + KV + AG
Sbjct: 262 ALLLTVDGEVFKLGSTLNKQPEKQQLQIDSS---EALFEKVPDFDGVKVMQIAAGAEHSA 318
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
A+T G + WG ++GQLGLG DQ P V++G
Sbjct: 319 AVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLG 354
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
V+ WG GQ+ +++Q L + I +A GG+ L G V++WG
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGS 76
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G ++ ++ P L+ F S + AG G +++ G ++ G
Sbjct: 77 SGQLGHGDILNITL-PKLV--------SFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 316 QYGQLGLGTVEDQPFPLKVA 335
+GQLG G P KV+
Sbjct: 128 SFGQLGHGDTLSLSTPAKVS 147
>gi|348512897|ref|XP_003443979.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oreochromis niloticus]
Length = 393
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 28/240 (11%)
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG 152
G NS+GQ +G V++ Q NIA L+ + G H++ +TESG+V+ CG
Sbjct: 3 GANSYGQLSQGHVED---QASPRLSNIAALQNRPVRAISGGGGHSVVITESGEVFVCGQN 59
Query: 153 ADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
GQ GLGH + T L I +R+ ++ D L ++D G + G++ +GQ+
Sbjct: 60 NRGQLGLGHSADIST--LQHCPILNQRVTDIACGWDFTLLLTDGGQLLACGSNVFGQLGV 117
Query: 213 SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPT 272
+ + +L + +V VA+G + G VY WG GL R++ P
Sbjct: 118 GQTVTHSADLLVVESLMEPVVSVAAGLRHSLAVTGSGCVYQWGTGLF---SYAKRALSPH 174
Query: 273 LIPSTLFGQHQFNPKSKVESLI------------AGPCTFGAITNFGHLYMWGKNQYGQL 320
+PS FN SKV L+ AG +T G L++WG N++GQL
Sbjct: 175 AVPS------HFN--SKVPCLVPGLDQRISHRVTAGSAHCVCLTGDGDLFLWGSNKHGQL 226
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 21/260 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G H++VIT++ F G N+ GQ G G D C + +++ D
Sbjct: 34 VRAISGGGGHSVVITESGEVFVCGQNNRGQLGLG--HSADISTLQHC----PILNQRVTD 87
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG D TL LT+ G++ +CG GQ G+G LV + E +V +++ +
Sbjct: 88 IACGWDFTLLLTDGGQLLACGSNVFGQLGVGQTVTHSADLLVVESLM-EPVVSVAAGLRH 146
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTP-----RVLSQCKGVSRIVD--VASGGSAC 242
LAV+ G V+ WG + + + P +V G+ + + V +G + C
Sbjct: 147 SLAVTGSGCVYQWGTGLFSYAKRALSPHAVPSHFNSKVPCLVPGLDQRISHRVTAGSAHC 206
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G ++ WG GQ + PTL+ +L KV ++ +G
Sbjct: 207 VCLTGDGDLFLWGSNKHGQLTTTESFLSSPTLLKRSLL------DGEKVINVWSGWTHIV 260
Query: 302 AITNFGHLYMWGKNQYGQLG 321
A T G ++ WG+ YGQLG
Sbjct: 261 AQTESGRVFTWGRGNYGQLG 280
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 61/309 (19%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++TDIACG+ FT++ T +L CG N QLG L +V S +
Sbjct: 84 RVTDIACGWDFTLLLTDGG----QLLACGSNVFGQLGVGQTVTHSADLLVVESLME---- 135
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE---EDYQGKWFCHNI 119
+ +A G H++ +T + + +G F R + + K C +
Sbjct: 136 ------PVVSVAAGLRHSLAVTGSGCVYQWGTGLFSYAKRALSPHAVPSHFNSKVPCL-V 188
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET----PCLV-RGE 174
L+ G H + LT G ++ WG++ G L E+ P L+ R
Sbjct: 189 PGLDQRISHRVTAGSAHCVCLTGDGDLFL--WGSNKH---GQLTTTESFLSSPTLLKRSL 243
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG----QISESE---------------M 215
++GE+++ + S ++A ++ G VF WG YG QIS SE
Sbjct: 244 LDGEKVINVWSGWTHIVAQTESGRVFTWGRGNYGQLGRQISASEDTEQQPAGPVAQGGTQ 303
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQG-------PKV 265
++ P + +G ++I GS + + G + SWG+ G+ G G P++
Sbjct: 304 EVGLPAEVENLRGATQICC----GSEHNLASVGGSLLSWGWNEHGMCGDGSQANVFLPQL 359
Query: 266 SRSMKPTLI 274
++P LI
Sbjct: 360 VPGLRPVLI 368
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEYPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 224 LSDEEDRESPCHVKL 238
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGAKGQLGTG 330
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V+ WG GQ + + L KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI E + + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTMDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD----T 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 230 ISWISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 332 DQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 227
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 224 LSDEEDRESPCHVKL 238
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V+ WG GQ + + L KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ------KVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
K++ CG ++ +LG L +S IP+P + + +K +A +G H
Sbjct: 2783 KIYACGEATNGRLG------------LGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHA 2830
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ +T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 2831 MALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKAKRIRDIACGSSHS 2882
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++YS G G G+ G G Q P LV+ + G R+++++ S LA++D
Sbjct: 2883 AAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTD 2941
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 2942 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3000
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3001 GKGDYFRLGHGTDV-HVRKPQMVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYA 3051
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3081
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT + +T+G ++G+ G G ED + L+
Sbjct: 510 KQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHG--SSEDQTTPML---VTALK 564
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP LV +++ IV
Sbjct: 565 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE-KLQDLDIV 623
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ ++ + P++L +G ++VDVA G +
Sbjct: 624 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQG-KKVVDVAVGST 682
Query: 241 ACTMLNDEGLVYSWG 255
C L D+G V+SWG
Sbjct: 683 HCLALTDDGEVHSWG 697
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 2871 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NTTQLRPKLVKVLL- 2920
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 2921 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 2973
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2974 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVH 3032
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3033 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3090
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 38/249 (15%)
Query: 103 GIVQEEDYQ----GKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
G V ++Y+ H+++ + K+ GQ H L L+ +G+V+S G G G+ G
Sbjct: 433 GAVYTQNYKSTTLAPMLIHSLSSRKMVKLAAHPDGQ-HYLALSSNGEVFSWGCGDGGRLG 491
Query: 159 LGHLNNQETPCLV---RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SE 214
G E P ++ G+ G+ +V ++ A++ G+++ WG YG++ S
Sbjct: 492 HGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSS 551
Query: 215 MQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEGLVYSWG---YGLLGQG------- 262
+TP +++ KG+ ++VDVA G G A T+ + + G V+SWG YG LG+G
Sbjct: 552 EDQTTPMLVTALKGL-KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 610
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
PK+ ++ I G QF+ A+T G +Y WGK +LG
Sbjct: 611 PKLVEKLQDLDIVKVCCGS-QFSV---------------ALTKDGQVYTWGKGDNQRLGH 654
Query: 323 GTVEDQPFP 331
GT E FP
Sbjct: 655 GTDEHVRFP 663
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 3852 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSAC 3910
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
++ G++F WG YG++ +SE Q+ P+++ +G R++DVA G G A T+ L D+
Sbjct: 3911 ITASGELFTWGKGRYGRLGHGDSEDQLK-PKLVDALQG-HRVIDVACGSGDAQTLCLTDD 3968
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 3969 DMVWSWGDGDYGKLGRGG--SDGCKTPMKIDSLTGLGVI----KVE---CGSQFSVALTK 4019
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4020 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4048
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GK+Y+CG +G+ GLG L++ P + +VK + S
Sbjct: 2768 VAGGSKSLFAVTVEGKIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSG 2826
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKA-KRIRDIACGSSHSAAI 2885
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +YSWG YG LG G ++ ++P L+ L G Q S+ +
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLV-KVLLGHRVIQVACGSRDAQTL------ 2937
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2938 -ALTDEGLVFSWGDGDFGKLGRGGSE 2962
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQ--EEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + ++ N F++G G+ G G EE F A G+ ++ CG +
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQA---GKHVVHIACGSTY 525
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVS 194
+ +T G++Y+ G G G+ G G +Q TP LV ++G ++V ++ S LAV+
Sbjct: 526 SAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAVT 584
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + IV V G L +G VY+
Sbjct: 585 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLD-IVKVCCGSQFSVALTKDGQVYT 643
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G P L+ TL G+ KV + G A+T+ G ++
Sbjct: 644 WGKGDNQRLGHGTD-EHVRFPKLL-DTLQGK-------KVVDVAVGSTHCLALTDDGEVH 694
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 695 SWGSNDKLQ 703
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 52/276 (18%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G AH+ IT + FT+G +G+ G G D + + + L+G +++
Sbjct: 3897 EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHG-----DSEDQLKPKLVDALQGHRVI 3951
Query: 129 DAVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D CG TL LT+ V+S G G G+ G G + +TP + + G ++K+
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKI-DSLTGLGVIKVECG 4010
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 4011 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCC 4069
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
++G + + +GL P+ S
Sbjct: 4070 TEDGRIKVFQWGL----PRWS-------------------------------------LG 4088
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4089 LGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4124
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD 188
+ G + TLF +T GK+Y+ G+GA G+ G+G + TP L+ + R V ++S
Sbjct: 3795 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGK 3854
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA+S +G+V+ WG +E G++ + PRV+ +GV +VD+A+GG+ +
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGV-EVVDIAAGGAHSACITA 3913
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G +++WG YG LG G + +KP L+ L G + +G +T
Sbjct: 3914 SGELFTWGKGRYGRLGHGDSEDQ-LKPKLV-DALQGHRVIDVACG-----SGDAQTLCLT 3966
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ ++ WG YG+LG G + P+K+
Sbjct: 3967 DDDMVWSWGDGDYGKLGRGGSDGCKTPMKI 3996
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R V+L + AV
Sbjct: 3748 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV 3805
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLV 251
+ G ++ G G++ + +STP +L + V R V V SGG C L+ EG V
Sbjct: 3806 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3865
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P +I S L G +V + AG IT G
Sbjct: 3866 YSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------VEVVDIAAGGAHSACITASGE 3916
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
L+ WGK +YG+LG G EDQ P
Sbjct: 3917 LFTWGKGRYGRLGHGDSEDQLKP 3939
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 38/261 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ DIA G + T S + LF G +LG+ D + P +LV +
Sbjct: 3896 VEVVDIAAGGAHSACITASGE----LFTWGKGRYGRLGHGDSEDQLKP-KLVDALQ---- 3946
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 3947 --GHRVIDVA-CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----GSDGCKTPMKIDS 3998
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 3999 LTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4057
Query: 182 KLSS-AVDCVLAVSD----------------KGDVFGWGNSEYGQISE-SEMQISTPRVL 223
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR++
Sbjct: 4058 AIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4117
Query: 224 SQCKGVSRIVDVASGGSACTM 244
+ +G + ++ + GSA T+
Sbjct: 4118 AALQG--KKINRVACGSAHTL 4136
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +T+N +++G+ +G+ GRG + + + DL+ I+ CG
Sbjct: 575 SGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLD---IVKVCCGS 629
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
++ LT+ G+VY+ G G + + G G + P L+ ++G+++V ++ LA++
Sbjct: 630 QFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLL-DTLQGKKVVDVAVGSTHCLALT 688
Query: 195 DKGDVFGWGNSEYGQ 209
D G+V WG+++ Q
Sbjct: 689 DDGEVHSWGSNDKLQ 703
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 245 LNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK---VESLIAGPC 298
L+ G V+SWG G LG G + +PT+I + FN K V + G
Sbjct: 473 LSSNGEVFSWGCGDGGRLGHG-DTTYLEEPTMIAA-------FNGKQAGKHVVHIACGST 524
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AIT G LY WG+ YG+LG G+ EDQ P+ V
Sbjct: 525 YSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLV 560
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3029 KIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3083
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3084 RVACGSSHSVAWT 3096
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI E + + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTMDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD----T 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 230 ISWISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 332 DQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 227
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 124/256 (48%), Gaps = 15/256 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ L+ G HT +T N + G+N++GQ G G + K C + L+ EK+
Sbjct: 123 LAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLG---SKTTVNKPTC--VKALKPEKVKF 177
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A CG++HTL TE G VY+ G +DGQ GLG + T + +I +LS+ +
Sbjct: 178 AACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNT 237
Query: 190 VLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
A+++ G+++ WG++ GQI SE + P + K VS V+ G ++ +
Sbjct: 238 SAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSW---VSCGYYHSALVTTD 294
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G +Y++G G+ S +K IP + G KV + G A+T
Sbjct: 295 GELYTFGEPENGKLGLSSEQLKNHRIPQLVPG-----ISGKVNQVACGGGHTVALTE-ED 348
Query: 309 LYMWGKNQYGQLGLGT 324
+Y +G ++GQLGLGT
Sbjct: 349 VYTFGLGEFGQLGLGT 364
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 36/325 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++CG T T N KL+ G N+ QLG P + V+ P
Sbjct: 123 LAQLSCGDEHTAFVTG----NSKLYMLGSNNWGQLGLGSKTTVNKP-----TCVKALKPE 173
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K +K A GR HT+V T+ + G NS GQ G G D + + H I+
Sbjct: 174 K-----VKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLG-----DTEERTTFHQISFFT 223
Query: 124 GE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
KI G + + LTE G++Y G ++GQ GL +N PC V + G+ +
Sbjct: 224 SRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV---VIGKPVSW 280
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSA 241
+S V+ G+++ +G E G++ S Q+ R+ G+S ++ VA GG
Sbjct: 281 VSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGKVNQVACGGGH 340
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L +E VY++G +G LG G + + P ++ + K K+ + G
Sbjct: 341 TVALTEED-VYTFGLGEFGQLGLGTCIFETSVPKVV--------EHLRKQKIHYVACGEN 391
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
I++ G +Y +G ++G+LGLG
Sbjct: 392 HTALISDTGLMYTFGDGRHGKLGLG 416
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CGY + + T + L+ G + +LG + K + RIP V
Sbjct: 281 VSCGYYHSALVTTDGE----LYTFGEPENGKLGLSSEQLKNH---------RIPQLVPGI 327
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++ +A G HT+ +T+ E +TFG FGQ G G E K H L +K
Sbjct: 328 SGKVNQVACGGGHTVALTE-EDVYTFGLGEFGQLGLGTCIFETSVPKVVEH----LRKQK 382
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT ++++G +Y+ G G G+ GLG N NQ P L
Sbjct: 383 IHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTL 428
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 94/251 (37%), Gaps = 75/251 (29%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
FTFG + F E+ K++ N + + CG +HT F+T + K+Y
Sbjct: 99 AVFTFGKSKFA---------ENIPSKFWLRN------DTLAQLSCGDEHTAFVTGNSKLY 143
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G GQ GLG P V+ ++ E++ + + L ++ G+V+
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKA-LKPEKVKFAACGRNHTLVCTEGGNVY------- 195
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
A+GG++ G LG G R
Sbjct: 196 ----------------------------AAGGNS--------------DGQLGLGDTEER 213
Query: 268 SMKPTLIPSTLFGQHQF-NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
T F Q F + K++ L AG T A+T G LYMWG N GQ+GL +
Sbjct: 214 ---------TTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASES 264
Query: 327 DQPFPLKVAVG 337
+ P +V +G
Sbjct: 265 NVCVPCRVVIG 275
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH+ P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHVREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---VREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G V+E + + I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--VREGNKPEQ-----IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G YGQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S+GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSYGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 17/220 (7%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ I + CG +H++FL E G+VY+CG GQ LGH P + G + + IV
Sbjct: 32 ISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQ--LGHEREGNKPEQI-GALADQHIV 88
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ LA+SD+G +F WG GQ+ + +E ++ PR++ + I+ V+ G
Sbjct: 89 HVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSCGN 147
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
C L +G ++WG +G LG G + P + S + P ++V AG
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL-----EGIPLAQVA---AG 199
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A++ G ++ WG+N GQLGL D+ P V +
Sbjct: 200 GAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKL 239
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 28/273 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G H+I + ++ +T G+N+ GQ G + Q I L + I+
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQ-------IGALADQHIVH 89
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAV 187
CG+ H+L L++ G+++S G G+DGQ LGH +++ + R ++ + I+++S
Sbjct: 90 VACGESHSLALSDQGQLFSWGAGSDGQ--LGHTTTEDSVAIPRLIKKLNQQMILQVSCGN 147
Query: 188 DCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKS-LEGIP-LAQVAAGGAHSFA 205
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L+ G V+ WG G LG + R P + + KV + G
Sbjct: 206 LSLSGAVFGWGRNNAGQLGLSDETDRQ-SPCHV--------KLLRTQKVVYISCGEEHTA 256
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ +G +GQLG ++ D+ P +V
Sbjct: 257 VLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRV 289
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++ACG ++ + + ++ CG N+ QLG+ ++GN E + +
Sbjct: 37 IKEVACGGNHSIFLLEDGE----VYTCGSNTKGQLGH---EREGNKPEQIGALA------ 83
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G ++ + I L
Sbjct: 84 ---DQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRL----IKKLN 136
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H + L G+ ++ G GQ GLG +Q +P V+ +EG + +
Sbjct: 137 QQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVK-SLEGIPLAQ 195
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + ++V ++ G
Sbjct: 196 VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 256 AVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 307
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 308 LAFVPSSGLIYAFGCGARGQLGTG 331
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 260
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG SFGQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 SGGVFTFGAGSFGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 315
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+Y+ G GA GQ G GH N + P V+G +LSS D K +F G+
Sbjct: 316 LIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHN-GQLSSRADSFKYHIVK-HIFSGGD 373
Query: 205 SEYGQISESEMQISTP----RVLSQCKGVSRIVD 234
+ S+ E S+P R+++Q + S I D
Sbjct: 374 QTFVLCSKYEN--SSPADDFRIMNQAQYTSLIND 405
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP---LELVMSFVRI 59
K+ I+CG T V TKS +F G S QLG+ + NP LEL+ S
Sbjct: 244 KVVYISCGEEHTAVLTKSGG----VFTFGAGSFGQLGHDSMNDEVNPRRVLELMGS---- 295
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRG----IVQEEDYQGKW 114
++ +A GR HT+ + G + FG + GQ G G + +G W
Sbjct: 296 ---------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHW 346
Query: 115 FCHN 118
HN
Sbjct: 347 AAHN 350
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 30/257 (11%)
Query: 90 FTFGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+G S GQ G +GIV E C I+D + + CG +H++FL E G
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDG 53
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+VY+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 54 EVYTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGA 110
Query: 205 SEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
GQ+ +E ++ PR++ + I+ V+ G C L +G ++WG +G L
Sbjct: 111 GSDGQLGLMTTEDSVAVPRLIQKLN-QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G + P + S + P ++V + G +F A++ G ++ WG N GQ
Sbjct: 170 GLGKEFPSQASPQRVRSL-----EGIPLAQVAA--GGAHSF-ALSLSGAVFGWGMNNAGQ 221
Query: 320 LGLGTVEDQPFPLKVAV 336
LGL +D+ P V +
Sbjct: 222 LGLSDEKDRESPCHVKL 238
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 35/336 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
+ + G +Y +G GQLG G + P P+K
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V+ WG GQ + + L KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL------RTQKVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 27/280 (9%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P V+ S + +A G+ H++ + + + +G+N +GQ G G ++ +W
Sbjct: 240 VPWRVEDVSGVVA-VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNS---RWLPKQ 295
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G ++ G H+L + G V++ G A GQ G G + +P V G + G
Sbjct: 296 VPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVLG-VSGA 352
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVAS 237
V +++ L V+ G ++ WG++ GQ + + + TP + G+S +V VA+
Sbjct: 353 --VAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTP---GRVPGLSGVVSVAA 407
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
GG L +G V++WG G LG G + SR + P +P S V ++
Sbjct: 408 GGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWV-PRQVPEL----------SGVVAVA 456
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ G ++ WG N YGQLG G+ + PL V
Sbjct: 457 AGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHV 496
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R P+ V+ S + +A G H++ + + + +GNN++GQ G ++ +
Sbjct: 89 RTPVQVQGLS-GVAAVAAGHGHSLALRYDGTVWAWGNNAYGQLG-----DDTRDNRTVPV 142
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ L G ++ V G H+L + G V++ G GQ G G +++ P V G + G
Sbjct: 143 QVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVPVQVTG-LSG 199
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVA 236
+V +++ + LAV G V+ WGN+ GQ+ + E P + + VS +V VA
Sbjct: 200 --VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPW---RVEDVSGVVAVA 254
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK-----SKVE 291
+G + +G V++WG L GQ L L G ++ PK V
Sbjct: 255 AGQYHSLAVRYDGTVWAWGDNLYGQ-----------LGDGKLEGNSRWLPKQVPGLGGVV 303
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ AG + + G ++ WG N YGQLG G+ P++V
Sbjct: 304 AVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQV 346
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 149/373 (39%), Gaps = 73/373 (19%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+A GY ++V + + L+ G N D Q R G + R P P + P
Sbjct: 355 VAAGYRHSLVV----NSDGTLWAWGSNLDGQ------RGDG-------TLTRYPTPGRVP 397
Query: 67 S-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + +A G H + + + + +G+N+ GQ G G +W + +L G
Sbjct: 398 GLSGVVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHS-----RWVPRQVPELSG- 451
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G +L + G V+S G A GQ G G + P VR E +V +++
Sbjct: 452 -VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVR---ELSEVVAVAA 507
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTM 244
LAV G V+GWG ++YGQ+ + IS R Q G+S +V VA+
Sbjct: 508 GSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGMVSVAADFGHSLA 567
Query: 245 LNDEGLVYSWGYGL---LGQGPKVSRSMKPTLI--PSTL--------------------- 278
+ +G V++WG LG G +R + P + P T+
Sbjct: 568 VRADGTVWAWGNNTDSELGDG-TTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWA 626
Query: 279 --------FGQHQFNPKS---------KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G ++ + +L AG A+ + G L+ WG N GQLG
Sbjct: 627 WGTNFAGQLGDGSTTSRAVPVRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLG 686
Query: 322 LGTVEDQPFPLKV 334
GT+ P++V
Sbjct: 687 DGTLTHHALPVRV 699
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 25/279 (8%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ V S + +A G H++ + + + +G N+ GQ G G +
Sbjct: 140 VPVQVTGLSGVVSVVA-GDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRA-----VPVQ 193
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G ++ G +H+L + G V++ G A GQ G P V ++ G
Sbjct: 194 VTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPWRVE-DVSG- 249
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+V +++ LAV G V+ WG++ YGQ+ + +++ ++ + Q G+ +V V++G
Sbjct: 250 -VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGLGGVVAVSAG 308
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
++ +G V++WG YG LG G + + + P Q S ++ A
Sbjct: 309 FYHSLVVRSDGTVWAWGNNAYGQLGGGSR-AHAASPV----------QVLGVSGAVAVAA 357
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G + + G L+ WG N GQ G GT+ P P +V
Sbjct: 358 GYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRV 396
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHT 137
H++ + + +T G N GQ G G ++G + AV G H+
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSR--------RTPVQVQGLSGVAAVAAGHGHS 110
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L L G V++ G A GQ G +N+ P V G + G +V + + LAV G
Sbjct: 111 LALRYDGTVWAWGNNAYGQLGDDTRDNRTVPVQVTG-LSG--VVSVVAGDTHSLAVRSDG 167
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
V+ WG + GQ+ + V Q G+S +V VA+GG+ + +G V++WG
Sbjct: 168 SVWAWGRNTSGQLGDGTRDDRAVPV--QVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNN 225
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ + P +P + S V ++ AG A+ G ++ WG N Y
Sbjct: 226 ASGQLGGAPEAAYP--VP------WRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLY 277
Query: 318 GQLGLGTVE 326
GQLG G +E
Sbjct: 278 GQLGDGKLE 286
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 32/270 (11%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+PL V+ S ++ +A G H + + + + +G N +GQ G G E ++
Sbjct: 492 VPLHVRELS-EVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGF--EGISARRYSPVQ 548
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L G + A G H+L + G V++ G D + G G + P V
Sbjct: 549 VPGLSGMVSVAADFG--HSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAP---G 603
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVAS 237
+ LS+ + +A+ G ++ WG + GQ+ + +T R + + +G R +A+
Sbjct: 604 TVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGS---TTSRAVPVRVQGPVRASTLAA 660
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G S + +G +++WG+ G LG G ++ P +P + ++
Sbjct: 661 GQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHAL-PVRVPG-------------MSGVV 706
Query: 295 AGPCTFG---AITNFGHLYMWGKNQYGQLG 321
A T A+ + G L+ WG N GQLG
Sbjct: 707 AVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 191 LAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LAV G V+ G + +GQ+ + + + TP Q +G+S + VA+G L +G
Sbjct: 61 LAVRPDGTVWTTGGNGHGQLGDGTTLSRRTP---VQVQGLSGVAAVAAGHGHSLALRYDG 117
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V++WG YG LG + +R++ Q S V S++AG A+ +
Sbjct: 118 TVWAWGNNAYGQLGDDTRDNRTVPV-----------QVTGLSGVVSVVAGDTHSLAVRSD 166
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG+N GQLG GT +D+ P++V
Sbjct: 167 GSVWAWGRNTSGQLGDGTRDDRAVPVQV 194
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 24/201 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N+DS+LG ++ +PL V P T + L+ G +++ + +
Sbjct: 574 VWAWGNNTDSELGDGTTTRR-----------LVPLRVNAPGT-VALLSAGYNYSMAMRAD 621
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-KIMDAVCGQDHTLFLTESGK 145
+ +G N GQ G G + ++G + GQ H++ + G
Sbjct: 622 GSLWAWGTNFAGQLGDGSTTSRAVPVR--------VQGPVRASTLAAGQSHSMAVGSDGF 673
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+++ G+ +GQ G G L + P V G +V + ++ LAV G ++ WGN+
Sbjct: 674 LWAWGFNFEGQLGDGTLTHHALPVRVPGM---SGVVAVDVTLNLSLAVRSDGSLWAWGNN 730
Query: 206 EYGQISESEMQISTPRVLSQC 226
+ GQ+ T V S
Sbjct: 731 DVGQLGTQPSTYVTTAVRSSL 751
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 102/241 (42%), Gaps = 13/241 (5%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG 98
G++D + G+ E + + P+ V S + +A H++ + + + +GNN+
Sbjct: 525 GFNDYGQLGDGFEGISARRYSPVQVPGLSGMVS-VAADFGHSLAVRADGTVWAWGNNTDS 583
Query: 99 QCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
+ G G + G + + G ++++ + G +++ G GQ G
Sbjct: 584 ELGDGTTTRR------LVPLRVNAPGTVALLS-AGYNYSMAMRADGSLWAWGTNFAGQLG 636
Query: 159 LGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS 218
G ++ P V+G + R L++ +AV G ++ WG + GQ+ + +
Sbjct: 637 DGSTTSRAVPVRVQGPV---RASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHH 693
Query: 219 TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTL 278
V + G+S +V V + + +G +++WG +GQ + T + S+L
Sbjct: 694 ALPV--RVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLGTQPSTYVTTAVRSSL 751
Query: 279 F 279
+
Sbjct: 752 Y 752
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI E + + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTMDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD----T 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ G L ++ C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIG---LEDKSNVCIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 230 ISWISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 332 DQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 21/222 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G NS+ Q+G D P E+ + I ++ G H+ +T
Sbjct: 198 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVG------------KPISWISCGYYHSAFVTM 245
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +TFG G+ G +++ I E+++ CG HT+ LTE
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIP----ERVIQVACGGGHTVVLTEK-V 300
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+ G G GQ GLG + + + I+ ++I +S + +++ G ++ +G+
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGSACTML 245
+G++ + + C R +A GG C ML
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG--CHML 400
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 227
>gi|383319323|ref|YP_005380164.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379320693|gb|AFC99645.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 476
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 29/276 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G HT+ + D+ + +G+N++G+CG G +D K N LEG K D
Sbjct: 31 VKKVAVGLFHTVALADDGTVWAWGSNTYGECGEG--SSDDILLKPVMIN--GLEGVK--D 84
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAVD 188
G + ++ L G V++ G GQ G+G ++ P V ++ G ++ +S+
Sbjct: 85 VAVGNNFSMALKSDGTVWTWGDNRYGQLGIGTADDGRHPEPV--QVPGLTNVIAISADFQ 142
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQ------------CKGVSRIVDV 235
+A+ D G V+ WG++ YGQ+ + + + I P S+ G+ +V +
Sbjct: 143 LAMALKDDGTVWAWGSNSYGQLGDGKPIDIPPPLTYSKEWDMQNKPSPVMVSGLDHVVSI 202
Query: 236 ASGGSACTMLNDEGLVYSWGYG--LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+ G + D+G V+ WG LG+ K + + T P + G ++
Sbjct: 203 DASGWQAFAVKDDGTVWGWGQNTCTLGEWSKNNENSLYTSTPVQIVGLTDVK-----KAC 257
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
G + A+ G ++ WG+++YG LG G V+ P
Sbjct: 258 CLGGLSAVALKKDGTVWAWGEDRYGVLGNGEVKSYP 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 51/307 (16%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQG 112
R P PV+ P T + ++ + + D+ + +G+NS+GQ G G I Y
Sbjct: 121 RHPEPVQVPGLTNVIAISADFQLAMALKDDGTVWAWGSNSYGQLGDGKPIDIPPPLTYSK 180
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESG-KVYSC-------GWGADGQT-GLGHLN 163
+W D++ + V G DH + + SG + ++ GWG + T G N
Sbjct: 181 EW------DMQNKPSPVMVSGLDHVVSIDASGWQAFAVKDDGTVWGWGQNTCTLGEWSKN 234
Query: 164 NQ-----ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS 218
N+ TP + G + ++ L +A+ G V+ WG YG + E++ S
Sbjct: 235 NENSLYTSTPVQIVGLTDVKKACCLGGL--SAVALKKDGTVWAWGEDRYGVLGNGEVK-S 291
Query: 219 TPRVLS-----QCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMK 270
P V Q G++ IVD++ GG+ L D+G V++WG G LG SR
Sbjct: 292 YPDVDKVYNPIQVIGLTDIVDISCGGAHSLALKDDGTVWAWGKNYAGQLGDSTNESRG-T 350
Query: 271 PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG---LGTVED 327
P +P P +K S AG + AI +++ WG + YGQLG G +
Sbjct: 351 PCRVPI---------PAAKAIS--AGYYSNVAIDKDDNVWAWGMDDYGQLGDGEHGEMLY 399
Query: 328 QPFPLKV 334
+P P KV
Sbjct: 400 RPTPKKV 406
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 56/303 (18%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE----EDYQGKWFCHNIADLEGE 125
+K +A G ++ + + +T+G+N +GQ G G + E Q + IA
Sbjct: 82 VKDVAVGNNFSMALKSDGTVWTWGDNRYGQLGIGTADDGRHPEPVQVPGLTNVIAISADF 141
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---------------LNNQETPCL 170
++ + L + G V++ G + GQ G G + N+ +P +
Sbjct: 142 QL---------AMALKDDGTVWAWGSNSYGQLGDGKPIDIPPPLTYSKEWDMQNKPSPVM 192
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS-----EYGQISESEMQISTPRVLSQ 225
V G + +V + ++ AV D G V+GWG + E+ + +E+ + STP +
Sbjct: 193 VSGL---DHVVSIDASGWQAFAVKDDGTVWGWGQNTCTLGEWSKNNENSLYTSTPVQIVG 249
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG-----PKVSRSMKPTLIPST 277
V + + GG + L +G V++WG YG+LG G P V + P
Sbjct: 250 LTDVKKACCL--GGLSAVALKKDGTVWAWGEDRYGVLGNGEVKSYPDVDKVYNPI----- 302
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
Q + + + G A+ + G ++ WGKN GQLG T E + P +V +
Sbjct: 303 -----QVIGLTDIVDISCGGAHSLALKDDGTVWAWGKNYAGQLGDSTNESRGTPCRVPIP 357
Query: 338 GQK 340
K
Sbjct: 358 AAK 360
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G L D+G V++WG YG G+G +KP +I N V+
Sbjct: 34 VAVGLFHTVALADDGTVWAWGSNTYGECGEGSSDDILLKPVMI----------NGLEGVK 83
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+ G A+ + G ++ WG N+YGQLG+GT +D P V V G
Sbjct: 84 DVAVGNNFSMALKSDGTVWTWGDNRYGQLGIGTADDGRHPEPVQVPG 130
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
K++ CG ++ +LG L +S IP+P + + IK +A +G H
Sbjct: 3009 KIYACGEATNGRLG------------LGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHA 3056
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ +T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3057 MALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3108
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++YS G G G+ G G Q P LV+ + G R+++++ S LA++D
Sbjct: 3109 AAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTD 3167
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3168 EGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3226
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3227 GKGDYFRLGHGTDV-HVRKPQMVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYA 3277
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3307
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3097 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NTTQLRPKLVKVLL- 3146
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3147 -GHRVIQVA-CGSRDAQTLALTDEGFVFSWGDGDFGKLGRG-----GSEGCNVPQNIERL 3199
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3200 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVH 3258
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3259 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3316
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 35/228 (15%)
Query: 122 LEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV---RGEIE 176
L KI+ D H L L+ +G+V+S G G G+ G G E P ++ G+
Sbjct: 481 LSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQA 540
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDV 235
G+ +V ++ A++ G+++ WG YG++ S +TP V++ KG+ ++VDV
Sbjct: 541 GKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGL-KVVDV 599
Query: 236 ASG-GSACTM-LNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQ 283
A G G A T+ + + G V+SWG YG LG+G PK+ ++ I G Q
Sbjct: 600 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGS-Q 658
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
F+ A+T G +Y WGK +LG GT E +P
Sbjct: 659 FSV---------------ALTKDGQVYTWGKGDNQRLGHGTDEHVRYP 691
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GK+Y+CG +G+ GLG L++ P + ++K + S
Sbjct: 2994 VAGGSKSLFAVTVEGKIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSG 3052
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3053 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3111
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +YSWG YG LG G ++ ++P L+ L G Q S+ +
Sbjct: 3112 TSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLV-KVLLGHRVIQVACGSRDAQTL------ 3163
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3164 -ALTDEGFVFSWGDGDFGKLGRGGSE 3188
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I L
Sbjct: 4033 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESL 4087
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +++D G H+ +T SG++++ G G G+ G G +Q P LV ++G R++
Sbjct: 4088 RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA-LQGHRVID 4146
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4147 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VVKVECGS 4205
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4206 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATG 4256
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4257 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD 188
+ G + TLF +T GK+Y+ G+GA G+ G+G + TP L+ + R V ++S
Sbjct: 3989 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGK 4048
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA+S +G+V+ WG +E G++ + PRV+ +GV +VD+A+GG+ +
Sbjct: 4049 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGV-EVVDIAAGGAHSACITA 4107
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G +++WG YG LG G + +KP L+ L G + +G +T
Sbjct: 4108 SGELFTWGKGRYGRLGHGDSEDQ-LKPKLV-DALQGHRVIDVACG-----SGDAQTLCLT 4160
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ ++ WG YG+LG G + P+K+
Sbjct: 4161 DDDMVWSWGDGDYGKLGRGGSDGCKIPMKI 4190
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 53 VMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG---IVQEED 109
V+S +I HP Q H + ++ N F++G G+ G G ++E
Sbjct: 480 VLSSRKIVKLAAHPDGQ---------HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPK 530
Query: 110 YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
G + G+ ++ CG ++ +T G++Y+ G G G+ G G +Q TP
Sbjct: 531 MIGTFNGKQ----AGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM 586
Query: 170 LVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQC 226
+V +G ++V ++ S LAV++ G V+ WG+ +YG++ TP+++ +
Sbjct: 587 VVTA-FKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 645
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQ 283
+ + IV V G L +G VY+WG G LG G P L+ S L G+
Sbjct: 646 QDLD-IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDS-LQGK-- 700
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
KV + G A+T+ G + WG N Q
Sbjct: 701 -----KVVDVAVGSTHCLALTDDGEVLSWGSNDKLQ 731
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R V+L + AV
Sbjct: 3942 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAV 3999
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLV 251
+ G ++ G G++ + +STP +L + V R V V SGG C L+ EG V
Sbjct: 4000 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4059
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P +I S L G +V + AG IT G
Sbjct: 4060 YSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------VEVVDIAAGGAHSACITASGE 4110
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
L+ WGK +YG+LG G EDQ P
Sbjct: 4111 LFTWGKGRYGRLGHGDSEDQLKP 4133
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ DIA G + T S + LF G +LG+ D + P +LV +
Sbjct: 4090 VEVVDIAAGGAHSACITASGE----LFTWGKGRYGRLGHGDSEDQLKP-KLVDALQ---- 4140
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4141 --GHRVIDVA-CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----GSDGCKIPMKIDS 4192
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4193 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4251
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + ++ + G
Sbjct: 4252 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKINRVACG 4308
Query: 240 SACTM 244
SA T+
Sbjct: 4309 SAHTL 4313
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG ++ T + L+ G + +LG+ + P+ +V +F +
Sbjct: 544 VVHVACGSTYSAAITADGE----LYTWGRGNYGRLGHGSSEDQTTPM-VVTAFKGL---- 594
Query: 64 KHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A +G A T+ +T+N +++G+ +G+ GRG + + + D
Sbjct: 595 -----KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQD 647
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ I+ CG ++ LT+ G+VY+ G G + + G G + P L+ ++G+++V
Sbjct: 648 LD---IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL-DSLQGKKVV 703
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
++ LA++D G+V WG+++ Q
Sbjct: 704 DVAVGSTHCLALTDDGEVLSWGSNDKLQ 731
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ VC + L L+ SG VYS + + T L P L+ + +IVKL++
Sbjct: 444 VTQIVCSEKGFLILSSSGAVYSQNYKS---TTLA-------PMLIH-VLSSRKIVKLAAH 492
Query: 187 VD--CVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV---SRIVDVASGGS 240
D LA+S G+VF WG + G++ + + P+++ G +V VA G +
Sbjct: 493 PDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGST 552
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI-AG 296
+ +G +Y+WG YG LG G ++ P ++ + F V+ +G
Sbjct: 553 YSAAITADGELYTWGRGNYGRLGHGSSEDQTT-PMVVTA-------FKGLKVVDVACGSG 604
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLG 323
A+T G ++ WG YG+LG G
Sbjct: 605 DAQTLAVTENGQVWSWGDGDYGKLGRG 631
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 16/112 (14%)
Query: 231 RIVDVAS--GGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+IV +A+ G L+ G V+SWG G LG G + +P +I + FN
Sbjct: 485 KIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEEPKMIGT-------FN 536
Query: 286 PKSKVESLIAGPC--TF-GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K + ++ C T+ AIT G LY WG+ YG+LG G+ EDQ P+ V
Sbjct: 537 GKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVV 588
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4204 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4258
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G++I +++ LA S
Sbjct: 4259 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKINRVACGSAHTLAWS 4316
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3255 KIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3309
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3310 RVACGSSHSVAWT 3322
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCHNIADLEGEKIM 128
L+ G HT ++T N + FG+N++GQ G G I+ K C I L+ EK+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-------KPTC--IKALKPEKVK 90
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A CG++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ +
Sbjct: 91 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN 150
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+++ G +F WG++ GQI E + + P ++ K +S I + G +
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTM 207
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG 301
+G +Y++G G LG +PS L H+ +P+ + E +I C G
Sbjct: 208 DGELYTFGEPENGKLG-------------LPSELLMNHR-SPQRVLGIPERVIQVACGGG 253
Query: 302 AITNFGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 254 HTVVLTEKVVYAFGLGQFGQLGLGT 278
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 147/335 (43%), Gaps = 44/335 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 40 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 89 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT---- 141
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 198
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTP-RVLSQCKGV-SRIVDVASGGSA 241
V+ G+++ +G E G++ SE M +P RVL G+ R++ VA GG
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPSELLMNHRSPQRVL----GIPERVIQVACGGGH 254
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 255 TVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 306 HTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFP 340
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 195 ISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPSELLMNH-RSPQRVLGI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++ +K
Sbjct: 242 PERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQK 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 297 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 342
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN-DEGL 250
V+ ++ +G++ +GQ+ S+ I P + K V +A+ G T+++ D G
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRNHTLVSTDTGG 107
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R ++ F P ++ L AG T A+T G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGANTSAALTEDG 159
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL + P +V VG
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 189
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG TV+ TK + +F CG N QLG+ P K+ + + +F+
Sbjct: 63 VEQIACGETHTVLITKDGE----VFSCGNNDSGQLGHEKPTKRLQMIPGLDAFI------ 112
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K A G +H++ + + F +G+N+ GQ G G + + + L
Sbjct: 113 ------FKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRM----VKALG 162
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVK 182
++ CG+ HTL LT +G++Y+ G +DGQ GLG ET P L+ G + I
Sbjct: 163 TSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITG-LATIPIAF 221
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ + VS G VFGWG + +GQ+ +++ L + +++ VA G
Sbjct: 222 IACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFS 281
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
L +G V++ G G+ GQ
Sbjct: 282 VFLTMDGGVFTCGAGMYGQ 300
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 22/273 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+T ++ +A G HT++IT + F+ GNN GQ G + I L+
Sbjct: 60 ATAVEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKR-------LQMIPGLDAFI 112
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSS 185
A CG H++ + G+++ G ADGQ GLG L TP +V+ + +V+++
Sbjct: 113 FKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKA-LGTSIVVQIAC 171
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQIST-PRVLSQCKGVSRIVDVASGGSACT 243
LA+++ G+++ WG++ GQ+ +++I T P++++ + I +A GG
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIP-IAFIACGGYHSI 230
Query: 244 MLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+++ G V+ WG GQ +S P L+ + +KV+ + G
Sbjct: 231 VVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTL--------RNAKVKYVACGEEFSV 282
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G ++ P ++
Sbjct: 283 FLTMDGGVFTCGAGMYGQLGHGANSNEILPRQI 315
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG ++V +KS +FG G N+ QLG +D K P ++ +R
Sbjct: 217 IPIAFIACGGYHSIVVSKSG----AVFGWGRNTFGQLGMNDISDKYVPC--LLKTLR--- 267
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++K++A G ++ +T + G FT G +GQ G G E I +
Sbjct: 268 -----NAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNE-----ILPRQIIE 317
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G + CG+ HTL L S GKVY+ G G GQ G + TP +V G +
Sbjct: 318 LMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVLGPWSSKN- 376
Query: 181 VKLSSAVDCVLAVSDK---GDVFGWGNSEYGQISESEMQI 217
L+ VD + S+ +F G+ + +++ E I
Sbjct: 377 RSLAMEVDSASSTSEDCVVKHIFSGGDHCFATVTQKEDNI 416
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 120/280 (42%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V ++ + +A G AHT + + G +G+N GQ G G + +
Sbjct: 110 PVAVSGLTSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTP-----VAV 164
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G DHT T SG V G GQ G G ++ TP V G G
Sbjct: 165 SGLA-SGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVT 223
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ + C L S G V+ WG++ GQ+ + + STP +S S + +A+G
Sbjct: 224 AIAAGGSHTCALMSS--GGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLA--SGVTAIAAG 279
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G G V WG G LG G +RS P + G S V ++ A
Sbjct: 280 GFHTCARTSSGGVMCWGANWSGQLGDGTTTARS-----TPVAVSGL-----ASGVTAIAA 329
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T+ G ++ WG N +GQLG GT D+ P+ V+
Sbjct: 330 GDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVS 369
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 117/283 (41%), Gaps = 24/283 (8%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
R+ P + +A G AHT +T + G +G N FGQ G G +
Sbjct: 56 TRLHTSSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTP----- 110
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ L + G HT L SG V G GQ G G ++ TP V G
Sbjct: 111 VAVSGLT-SGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLAS 169
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDV 235
G + +++ D A + G V WG++ GQ+ + + STP +S S + +
Sbjct: 170 G--VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLG--SGVTAI 225
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A+GGS L G V+ WG G LG G RS P + G S V +
Sbjct: 226 AAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRS-----TPVAVSGL-----ASGVTA 275
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ AG A T+ G + WG N GQLG GT + P+ V+
Sbjct: 276 IAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTPVAVS 318
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 35/309 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N D QLG + P+ V + + +A G HT T + G
Sbjct: 398 GRNKDGQLGDGTTTTR-----------STPVAVSGLVSGVTAIAAGDDHTCARTSSGGVM 446
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G+N GQ G G + ++ L G + G HT L SG V+ G
Sbjct: 447 CWGDNWSGQLGDGTTTDRSTP-----VAVSGL-GSGVTAIAAGGSHTCALMSSGGVWCWG 500
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+ GQ G G ++ TP V G + ++S A++ G V WG + GQ+
Sbjct: 501 RNSSGQLGDGTTTDRGTPVAVSGLP--SEVTAIASGGVHTCALTSSGGVMCWGANWSGQL 558
Query: 211 SESEMQI-STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVS 266
+ STP +S S ++ +A+G L G V+ WG G LG G +
Sbjct: 559 GDGTTTARSTPVAVSGLP--SGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTA 616
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
RS P + G S V ++ AG A+T+ G ++ WG N GQLG G+
Sbjct: 617 RS-----TPVAVSGL-----PSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYT 666
Query: 327 DQPFPLKVA 335
D P+ V+
Sbjct: 667 DSSTPVAVS 675
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V ++ + +A G HT T + G +G N GQ G G +
Sbjct: 263 PVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTP-----VAV 317
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G HT LT SG V+ G+ GQ G G ++ TP V G G
Sbjct: 318 SGLA-SGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVT 376
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASG 238
+ C L S G V WG ++ GQ+ + STP +S VS + +A+G
Sbjct: 377 AIAAGDFHTCALMSS--GGVRCWGRNKDGQLGDGTTTTRSTPVAVSGL--VSGVTAIAAG 432
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G V WG G LG G RS P + G S V ++ A
Sbjct: 433 DDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRS-----TPVAVSGL-----GSGVTAIAA 482
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+ + G ++ WG+N GQLG GT D+ P+ V+
Sbjct: 483 GGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVS 522
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 119/297 (40%), Gaps = 35/297 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G NS QLG +G P+ + LP +++ +A+G HT +T + G
Sbjct: 500 GRNSSGQLGDGTTTDRGTPVAVS------GLP-----SEVTAIASGGVHTCALTSSGGVM 548
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G N GQ G G ++ L +M G HT LT SG V+ G
Sbjct: 549 CWGANWSGQLGDGTTTARSTP-----VAVSGLP-SGVMAIAAGDLHTCALTSSGGVWCWG 602
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+ GQ G G + TP V G G + S C L + G V+ WG + GQ+
Sbjct: 603 ANSSGQLGDGTTTARSTPVAVSGLPSGVTAIAAGSFHTCAL--TSSGGVWCWGANWSGQL 660
Query: 211 SE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVS 266
+ S STP +S S + +A+G G V+ W YG LG G +
Sbjct: 661 GDGSYTDSSTPVAVSGLP--SGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDG-SYT 717
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
S P + + G V ++ AG A T+ G + WG N GQLG G
Sbjct: 718 DSSTPVAVSGLVSG---------VTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDG 765
>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
Length = 426
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 135/313 (43%), Gaps = 62/313 (19%)
Query: 31 GLNSDSQLGYHDPRKKGNP--LELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEG 88
G N QLG+ D ++ P +E++ + V I A GR HT+ +TD
Sbjct: 33 GRNEKGQLGHGDTKRVEAPKLIEVLSNEV------------IVSAACGRNHTLALTD--- 77
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
G N GQ G G D + I L E I+ A CG++HTL LTE+G V++
Sbjct: 78 ---LGRNEKGQLGHG-----DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFA 129
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G GQ GLG+ + P + G+ I K++ + + + KG+++ +G EYG
Sbjct: 130 FGENKMGQLGLGNQTDA-IPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYG 188
Query: 209 QI---SESEMQISTPRVLSQCKGVSRIV---------------------DVASGGSACTM 244
Q+ S+ + R+ C+ V R V DVA G + +
Sbjct: 189 QLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLV 248
Query: 245 LNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTF 300
L+ + V+SW GYG LG + M P L+ F P + AG C+F
Sbjct: 249 LDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGAAHIYAGYTCSF 301
Query: 301 GAITNFGHLYMWG 313
A++ G L+ WG
Sbjct: 302 -AVSEIGGLFFWG 313
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ G G E P L+ + E IV + + LA++D G +E GQ
Sbjct: 33 GRNEKGQLGHGDTKRVEAPKLIE-VLSNEVIVSAACGRNHTLALTD------LGRNEKGQ 85
Query: 210 ISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
+ + ++ P+++ + IV A G + L + G V+++G +GQ +
Sbjct: 86 LGHGDTKRVEAPKLI-EVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQ---LGLG 141
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF-GHLYMWGKNQYGQLG 321
+ IPS + P +K +A F I + G+LY +G +YGQLG
Sbjct: 142 NQTDAIPSPAQIMYNGQPITK----MACGAEFSMIMDCKGNLYSFGCPEYGQLG 191
>gi|298714248|emb|CBJ27384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 635
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 41/331 (12%)
Query: 27 LFGCGLNSDSQLGYHD--PRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
++ G+NS QLG D PR + E+V + + +A G + +T
Sbjct: 102 VYVAGVNSSGQLGLGDWAPRDR---FEVVR---------ETRGAGVSFVAAGYDISFAVT 149
Query: 85 DNEGAFTFGNNSFG----QCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
++ ++G G + G G ++D I DL GE+I G H L
Sbjct: 150 EDHDVLSWGAKGIGATGHRLGTGAFDDDDEDLYMEPRPIRDLVGEEICQVQAGSSHCLAG 209
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
+ G +Y G G GQ GLG +++ P L G EG + +++ + L ++ G V+
Sbjct: 210 SMGGDLYVWGRGESGQLGLGDRESKQIPVLNAGFPEGTEVSQVAVGENHSLVLTKAGGVY 269
Query: 201 GWGNSEYGQ----------ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
WG+ + G+ + +SE I +L + V+ G S C +
Sbjct: 270 SWGHGDRGRLGVGACWRVGVPQSEKNIFPTPMLLHTFSKEVVRQVSCGPSFCLAVTAAN- 328
Query: 251 VYSWGYG---LLGQGPKVSRSMKPTLIPS---TLFGQHQFNPKSKVESLIAGPCTFGAIT 304
V+SWG G +LG G ++R P I + ++ Q + ++ PC G
Sbjct: 329 VWSWGAGEGCVLGHGDTLTRET-PVQIEAFKGSVVLQAECGTWHCAALVLVPPCKDG--- 384
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G+LY WG +GQL LGT + QP P VA
Sbjct: 385 --GYLYTWGSGYHGQLALGTRQVQPTPAIVA 413
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 118/282 (41%), Gaps = 33/282 (11%)
Query: 60 PLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CH 117
P P++ +I + G +H + + + +G GQ G G D + K
Sbjct: 185 PRPIRDLVGEEICQVQAGSSHCLAGSMGGDLYVWGRGESGQLGLG-----DRESKQIPVL 239
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG----------HLNNQET 167
N EG ++ G++H+L LT++G VYS G G G+ G+G N T
Sbjct: 240 NAGFPEGTEVSQVAVGENHSLVLTKAGGVYSWGHGDRGRLGVGACWRVGVPQSEKNIFPT 299
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQC 226
P L+ E + ++S LAV+ +V+ WG E + + + TP +
Sbjct: 300 PMLLH-TFSKEVVRQVSCGPSFCLAVT-AANVWSWGAGEGCVLGHGDTLTRETPVQIEAF 357
Query: 227 KGVSRIVDVASGGSACTML------NDEGLVYSWGYGLLGQGPKVSRSMKPT-LIPSTLF 279
KG S ++ G C L D G +Y+WG G GQ +R ++PT I + L
Sbjct: 358 KG-SVVLQAECGTWHCAALVLVPPCKDGGYLYTWGSGYHGQLALGTRQVQPTPAIVAKLL 416
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
Q + + G A+T G LY WG N+ G LG
Sbjct: 417 ATQQL-----LRKVWCGSHHCAAVTTDGELYTWGSNRTGCLG 453
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 78/195 (40%), Gaps = 17/195 (8%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
L E G VY G + GQ GLG ++ +VR E G + +++ D AV++ DV
Sbjct: 96 LEERGAVYVAGVNSSGQLGLGDWAPRDRFEVVR-ETRGAGVSFVAAGYDISFAVTEDHDV 154
Query: 200 FGWGNSEYGQI----------SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
WG G + E PR + G I V +G S C + G
Sbjct: 155 LSWGAKGIGATGHRLGTGAFDDDDEDLYMEPRPIRDLVG-EEICQVQAGSSHCLAGSMGG 213
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+Y WG G GQ R K IP G F ++V + G +T G +
Sbjct: 214 DLYVWGRGESGQLGLGDRESKQ--IPVLNAG---FPEGTEVSQVAVGENHSLVLTKAGGV 268
Query: 310 YMWGKNQYGQLGLGT 324
Y WG G+LG+G
Sbjct: 269 YSWGHGDRGRLGVGA 283
>gi|157137551|ref|XP_001664004.1| Bj1 protein, putative [Aedes aegypti]
gi|108869687|gb|EAT33912.1| AAEL013819-PA [Aedes aegypti]
Length = 484
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 34/263 (12%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT + A FG N GQ G+ ++ ++ + + D+ K++ A CG++HT
Sbjct: 125 AHSVLITMDRKALAFGRNQHGQLGQSDLRT--FEKPTPVNGLKDV---KVVQAACGRNHT 179
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
LFLT++G VY+CG GQ G+GH N R + G IVK++ + + + G
Sbjct: 180 LFLTDNGVVYACGDNRHGQCGVGHTNPTVLKA-TRLKYTGPPIVKVACGAEFSMILDING 238
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR---------------------IV 233
++ +G E+GQ+ ++ + I+ R+ + V R I+
Sbjct: 239 RLYSFGLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDVQIL 298
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
D A G + ++ + +SWG+G G G S + +P ++ K KV +
Sbjct: 299 DFACGNNHTVAIDSKNRAFSWGFG--GYGRLGHASPQDEWVPR--LNKYFDIQKRKVLRV 354
Query: 294 IAGPCTFGAITNFGHLYMWGKNQ 316
G AIT+ G ++++G+N+
Sbjct: 355 FCGTAFSVAITDVGCVHLFGRNR 377
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 57/304 (18%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ ACG T+ T N ++ CG N Q G G+ V+ R+
Sbjct: 167 VKVVQAACGRNHTLFLTD----NGVVYACGDNRHGQCGV------GHTNPTVLKATRL-- 214
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF--CHNI 119
K+ I +A G ++++ N ++FG GQ G + GK+F + +
Sbjct: 215 --KYTGPPIVKVACGAEFSMILDINGRLYSFGLPEHGQLG------HNTDGKYFITANRL 266
Query: 120 A-----------------------DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
A +E +I+D CG +HT+ + + +S G+G G+
Sbjct: 267 AYHYETVPRQIVTYVEKTNEGRTIPIEDVQILDFACGNNHTVAIDSKNRAFSWGFGGYGR 326
Query: 157 TGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM 215
G ++ P L + +I+ +++++ +A++D G V +G + +++ M
Sbjct: 327 LGHASPQDEWVPRLNKYFDIQKRKVLRVFCGTAFSVAITDVGCVHLFGRNRVN--ADANM 384
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKP 271
P+ + G ++ + +G S+ + D+ L+ +WG YG LG G V + KP
Sbjct: 385 Y---PKPVQDLTGW-KVTSIGAGYSSILISADDSLI-AWGASPTYGELGLGDVVKSTSKP 439
Query: 272 TLIP 275
L+P
Sbjct: 440 KLVP 443
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
VL D+ +G +++GQ+ +S+++ P ++ K V ++V A G + L D
Sbjct: 128 VLITMDR-KALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDV-KVVQAACGRNHTLFLTDN 185
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G+VY+ G +G G G PT++ +T ++ P KV A F I +
Sbjct: 186 GVVYACGDNRHGQCGVG-----HTNPTVLKATRL-KYTGPPIVKV----ACGAEFSMILD 235
Query: 306 F-GHLYMWGKNQYGQLGLGT 324
G LY +G ++GQLG T
Sbjct: 236 INGRLYSFGLPEHGQLGHNT 255
>gi|157137553|ref|XP_001664005.1| Bj1 protein, putative [Aedes aegypti]
gi|108869688|gb|EAT33913.1| AAEL013820-PA [Aedes aegypti]
Length = 484
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 40/266 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT + A FG N GQ G+ ++ ++ + + D+ K++ A CG++HT
Sbjct: 125 AHSVLITMDRKALAFGRNQHGQLGQSDLRT--FEKPTPVNGLKDV---KVVQAACGRNHT 179
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV---RGEIEGERIVKLSSAVDCVLAVS 194
LFLT++G VY+CG GQ G+GH N P ++ R + G IVK++ + + +
Sbjct: 180 LFLTDNGVVYACGDNRHGQCGVGHTN----PTVLKATRLKYTGPPIVKVACGAEFSMILD 235
Query: 195 DKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR-------------------- 231
G ++ +G E+GQ+ ++ + I+ R+ + V R
Sbjct: 236 INGRLYSFGLPEHGQLGHNTDGKYFITANRLAYHYETVPRQIVTYVEKTNEGRTIPIEDV 295
Query: 232 -IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
I+D A G + ++ + +SWG+G G G S + +P ++ K KV
Sbjct: 296 QILDFACGNNHTVAIDSKNRAFSWGFG--GYGRLGHASPQDEWVPR--LNKYFDIQKRKV 351
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQ 316
+ G AIT+ G ++++G+N+
Sbjct: 352 LRVFCGTAFSVAITDVGCVHLFGRNR 377
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 130/304 (42%), Gaps = 57/304 (18%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ ACG T+ T N ++ CG N Q G G+ V+ R+
Sbjct: 167 VKVVQAACGRNHTLFLTD----NGVVYACGDNRHGQCGV------GHTNPTVLKATRL-- 214
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF--CHNI 119
K+ I +A G ++++ N ++FG GQ G + GK+F + +
Sbjct: 215 --KYTGPPIVKVACGAEFSMILDINGRLYSFGLPEHGQLG------HNTDGKYFITANRL 266
Query: 120 A-----------------------DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
A +E +I+D CG +HT+ + + +S G+G G+
Sbjct: 267 AYHYETVPRQIVTYVEKTNEGRTIPIEDVQILDFACGNNHTVAIDSKNRAFSWGFGGYGR 326
Query: 157 TGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM 215
G ++ P L + +I+ +++++ +A++D G V +G + +++ M
Sbjct: 327 LGHASPQDEWVPRLNKYFDIQKRKVLRVFCGTAFSVAITDVGCVHLFGRNRVN--ADANM 384
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKP 271
P+ + G ++ + +G S+ + D+ L+ +WG YG LG G +V S KP
Sbjct: 385 Y---PKPVQDLTGW-KVTSIGAGYSSILISADDSLI-AWGASPTYGELGLGDEVKSSSKP 439
Query: 272 TLIP 275
L+P
Sbjct: 440 KLVP 443
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
VL D+ +G +++GQ+ +S+++ P ++ K V ++V A G + L D
Sbjct: 128 VLITMDR-KALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDV-KVVQAACGRNHTLFLTDN 185
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G+VY+ G +G G G PT++ +T ++ P KV A F I +
Sbjct: 186 GVVYACGDNRHGQCGVG-----HTNPTVLKATRL-KYTGPPIVKV----ACGAEFSMILD 235
Query: 306 F-GHLYMWGKNQYGQLGLGT 324
G LY +G ++GQLG T
Sbjct: 236 INGRLYSFGLPEHGQLGHNT 255
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 41/334 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ACG F++V + N+ L G G N QLG S VR LP + P
Sbjct: 354 LACGNAFSLVG---RGDNVTL-GWGANGSGQLGNGS------------SSVR-ALPGRVP 396
Query: 67 S-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
S T LA G H + + + +G+N++GQ G G + + + L
Sbjct: 397 SLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRL----SSTLTSV 452
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ + A H+L L G V++ G A GQ G + +P V G + G ++++
Sbjct: 453 RALSA--SSYHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPG-VAGA--TEIAA 507
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA+ G V+ WG++ YGQ+ PR + G++ I VA+G L
Sbjct: 508 GTYHSLALRSDGTVWTWGDNSYGQLGAGATP-RGPRAPAVVPGLAVITHVAAGLFHSLAL 566
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ G V++WG YG LG G SR+ +P + G + +++++AGP A
Sbjct: 567 DSSGQVWAWGDNVYGQLGDGSTTSRN-----VPGRVSGL-----PAGIQAIVAGPSYSVA 616
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ G ++ WG+N GQLG GT +P P +V++
Sbjct: 617 LGADGSVWTWGENSNGQLGDGTTTARPVPARVSL 650
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 33/283 (11%)
Query: 60 PLPVK---HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
P+PV+ +P T LA+G H + ++ + F+FG+NS GQ G Y+G
Sbjct: 743 PVPVQAVGYPRTV--PLASGAQHVLAVSSDGSVFSFGSNSRGQLG--------YEGSATQ 792
Query: 117 HNIADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
+ L G + ++AV G +L L+ G V++ G GQ G G + + P V G
Sbjct: 793 TSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGL- 851
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
+V +++ D LAV G V+ WG + GQ+ + ++ V Q K + +V V
Sbjct: 852 --AHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDG--TTTSRAVPMQVKELVDVVAV 907
Query: 236 ASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A G + +G V++W G G LG G SR++ P + STL G V++
Sbjct: 908 AGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTL-PVFV-STLSG---------VQA 956
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ +G A+ G ++ WG N GQLG GT + P++V+
Sbjct: 957 IASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVS 999
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 85/311 (27%), Positives = 130/311 (41%), Gaps = 45/311 (14%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F G NS QLGY + +P L I+ +A G ++ ++ +
Sbjct: 773 VFSFGSNSRGQLGYEGSATQTSPRWLT------------GPECIEAVAAGALFSLALSCD 820
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGK--WFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
G + +G+N GQ G G V + H +A G DH L + G
Sbjct: 821 GGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVA---------IAAGSDHALAVRADG 871
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G GQ G G ++ P V+ ++ +V ++ LAV G V+ WG
Sbjct: 872 TVWAWGANGSGQLGDGTTTSRAVPMQVKELVD---VVAVAGGSGHSLAVRADGTVWAWGA 928
Query: 205 SEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ GQ+ + T P +S GV I ASG L + G+V++WG G LG
Sbjct: 929 NGSGQLGDGTTTSRTLPVFVSTLSGVQAI---ASGAQHSLALAEGGVVWAWGANGSGQLG 985
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G SR+ +P Q + S V+ L+AG +F G ++ WG N GQL
Sbjct: 986 DGTTTSRT-RPV----------QVSGLSGVQGLVAG-ASFSLALTPGKVWSWGNNSAGQL 1033
Query: 321 GLGTVEDQPFP 331
G GT+ + P
Sbjct: 1034 GDGTLNSRSQP 1044
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 30/286 (10%)
Query: 58 RIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
R P P + P +A G H++ + + +T+G+NS+GQ G G
Sbjct: 489 RRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGP------- 541
Query: 117 HNIADLEGEKIMDAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
A + G ++ V G H+L L SG+V++ G GQ G G ++ P V G
Sbjct: 542 RAPAVVPGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLP 601
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR-VLSQCKGVSRIVD 234
G I + + +A+ G V+ WG + GQ+ + +T R V ++ + +V
Sbjct: 602 AG--IQAIVAGPSYSVALGADGSVWTWGENSNGQLGDG---TTTARPVPARVSLPATLVA 656
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+++ GS L+ G++++WG G LG G VS S P +PS ++V+
Sbjct: 657 LSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSEST-PRRVPSF----------ARVQ 705
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+G T A+ G ++ WG N GQLG G P P++ AVG
Sbjct: 706 GFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVPVQ-AVG 750
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H+L++T +G V++ G A GQ G G TP V G + G + +++ +A
Sbjct: 56 GLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVG-LTG--VTAVAAGNTHSMA 112
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG-SACTMLNDEGLV 251
+ ++G V+ WG + GQ+ + Q S P +Q G++ + +A+G + ++N G V
Sbjct: 113 LREEGTVWTWGTNTDGQLGDGVSQRSVP---AQVAGLTGVTAIAAGNLHSLALIN--GAV 167
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WG G LG G SRS P+ + G ++V ++ AG A+ G
Sbjct: 168 WAWGNNTTGQLGDGSSTSRST-----PAKVAGL------TEVVAIAAGDFHSLALKRDGT 216
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ WG N GQLG GT++ + P++V+
Sbjct: 217 VWAWGGNYSGQLGDGTLDSRSTPVRVS 243
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 78/266 (29%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
LA G H++ +T + +G N+ GQ G G + + + L G +
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQ-----VVGLTG--VTAVAA 105
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H++ L E G V++ G DGQ G G ++ + P V G + G + + L
Sbjct: 106 GNTHSMALREEGTVWTWGTNTDGQLGDG-VSQRSVPAQVAG-LTGVTAIAAGNLHSLALI 163
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
G V+ WGN+ GQ+ + S STP ++ G++ +V +A+G L +G V
Sbjct: 164 ---NGAVWAWGNNTTGQLGDGSSTSRSTP---AKVAGLTEVVAIAAGDFHSLALKRDGTV 217
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WG G LG G SRS P + S L G S+ A T G G
Sbjct: 218 WAWGGNYSGQLGDGTLDSRS-TPVRV-SGLTGIVALAGGGS-HSVAASSTTLG-----GK 269
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N YGQLG G PL+V
Sbjct: 270 VWAWGDNTYGQLGNGGDVSSLLPLEV 295
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 62/315 (19%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + +A G H++ + N + +GNN+ GQ G G K +A L ++
Sbjct: 147 TGVTAIAAGNLHSLALI-NGAVWAWGNNTTGQLGDGSSTSRSTPAK-----VAGLT--EV 198
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G H+L L G V++ G GQ G G L+++ TP V G + G IV L+
Sbjct: 199 VAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSG-LTG--IVALAGGG 255
Query: 188 DCVLAVSDK---GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A S G V+ WG++ YGQ+ +S+ L + G++++V +ASG S
Sbjct: 256 SHSVAASSTTLGGKVWAWGDNTYGQLGNGG-DVSSLLPL-EVPGLTQVVALASGTSHSLA 313
Query: 245 LNDEGLVYSWG-----------------------------------YGLLGQGPKVSRSM 269
L + V++WG + L+G+G V+
Sbjct: 314 LRGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGW 373
Query: 270 KPTLIPSTLFGQHQFNPKS---KVESLIAGPCTFGAITNF------GHLYMWGKNQYGQL 320
S G + ++ +V SL AG + G ++ WG N YGQL
Sbjct: 374 GAN--GSGQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQL 431
Query: 321 GLGTVEDQPFPLKVA 335
G GT+ +P P++++
Sbjct: 432 GDGTLVSRPAPVRLS 446
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
R +L++ ++ L V+ G V+ WG + GQ+ E S +Q STP +Q G++ + VA+
Sbjct: 49 RPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTP---TQVVGLTGVTAVAA 105
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G + L +EG V++WG GQ G VS+ P Q + V ++ AG
Sbjct: 106 GNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSVPA----------QVAGLTGVTAIAAG 155
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ N G ++ WG N GQLG G+ + P KVA
Sbjct: 156 NLHSLALIN-GAVWAWGNNTTGQLGDGSSTSRSTPAKVA 193
Score = 45.4 bits (106), Expect = 0.034, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P+ VK + +A G H++ + + + +G N GQ G G +
Sbjct: 894 VPMQVKE-LVDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTS-----RTLPVF 947
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
++ L G + + + G H+L L E G V++ G GQ G G ++ P V G + G
Sbjct: 948 VSTLSGVQAIAS--GAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG-LSG- 1003
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVAS 237
+ L + LA++ G V+ WGN+ GQ+ + + S P +S V +++
Sbjct: 1004 -VQGLVAGASFSLALT-PGKVWSWGNNSAGQLGDGTLNSRSQP---GAGPTLSSFVALSA 1058
Query: 238 GGSACTMLNDEGLVYSWG 255
G +L + SWG
Sbjct: 1059 GAQHTVVLRSDDSFLSWG 1076
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 37/318 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHL--ATGRAHTIVIT 84
+ CGLN Q G+ GN E VM I H ++K++ + G H I IT
Sbjct: 402 VLTCGLNKSGQCGH------GNFDERVMLLRPIQALRSH---RVKYINASNGCEHLIAIT 452
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
D A+++G N GQ G V + Y K I ++ +K+ A H+ ++ SG
Sbjct: 453 DTGLAYSWGYNDRGQLGHENVGTKLYLPKL----IESIKEKKMKSAAVSYHHSALVSVSG 508
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++Y+ G GQ GL H +Q TP LV+ + G + +S + ++ + G+VF G
Sbjct: 509 ELYTFGMNDCGQLGLDHTQHQSTPQLVKALL-GHHVSMVSCGLYHMVLCTISGEVFTCGK 567
Query: 205 SEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+++GQ+ ++++ T VL + VA G T + GL YS+G YG
Sbjct: 568 NDHGQLGLGHNKQVKVPTQVVLPN----ELVCFVACGYYHATAITSTGLTYSFGRNDYGQ 623
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G K+ +++ L S+ +++ G +++ G ++++G+N G
Sbjct: 624 LGIGSKIHQNIPIALTISS---------NTRMVHAACGCYHTLLMSDSGQVFVFGRNNKG 674
Query: 319 QLGLGTVEDQ--PFPLKV 334
QLG D P PLKV
Sbjct: 675 QLGNRGNTDSLLPVPLKV 692
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 136/329 (41%), Gaps = 38/329 (11%)
Query: 26 KLFGCGLNSDSQL--GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
++F CG N+ +L G+ +P N LE F I+ +A G +V+
Sbjct: 3134 EIFSCGQNNYGELCLGHCNP---TNKLERASFF---------SYKSIQSIAGGNEVLVVL 3181
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI--MDAVCGQDHTLFLT 141
+ FT G N GQCG G E I L G I + A G +H L ++
Sbjct: 3182 MKDGAVFTCGLNKSGQCGIGNFDERLIVPS----PIPALSGIPITMVAASNGCEHMLAIS 3237
Query: 142 ESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
G VYS G+ GQ GLG ++ TP ++ E I + + VS+ GD+
Sbjct: 3238 HDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLL 3297
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
+G ++ GQ+ Q L + ++ VA G + D+G VYS+G YG
Sbjct: 3298 TFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYG 3357
Query: 258 LLG----QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
LG Q KV +K P T + +K + G I G + WG
Sbjct: 3358 QLGLSHTQNTKVPMLVKIPPAPRTPM----LDAVNKAVQVYCGYYHTVTILECGKVVTWG 3413
Query: 314 KNQYGQLGLGTVEDQ------PFPLKVAV 336
+N YGQLG+G+ E + P PL V
Sbjct: 3414 RNDYGQLGIGSKEHKSIAQFVPLPLTSRV 3442
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 46/321 (14%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K+ +F CGLN Q G GN E ++ IP P T + + G H +
Sbjct: 3183 KDGAVFTCGLNKSGQCGI------GNFDERLIVPSPIPALSGIPITMVA-ASNGCEHMLA 3235
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK--IMDAVCGQDHTLFL 140
I+ + +++G N GQ G G + + + + + EK I A H+ +
Sbjct: 3236 ISHDGAVYSWGYNDRGQLGLGTTVSKSHTPR-----VIESLREKYFITFAAVSYHHSAVV 3290
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
+ +G + + G GQ GL H +Q TP LV + +++ +++ + +A+ D GDV+
Sbjct: 3291 SNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVET-LSSQKVGRVACGLYHTVAIVDDGDVY 3349
Query: 201 GWGNSEYGQISESEMQIS----------TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+G +EYGQ+ S Q + PR V++ V V G + + G
Sbjct: 3350 SFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRT-PMLDAVNKAVQVYCGYYHTVTILECGK 3408
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC----TFGAI 303
V +WG YG LG G K +S+ QF P + C T +
Sbjct: 3409 VVTWGRNDYGQLGIGSKEHKSIA------------QFVPLPLTSRVKRASCGCYHTLLLL 3456
Query: 304 TNFGHLYMWGKNQYGQLGLGT 324
N G ++G+N GQLG+ +
Sbjct: 3457 VN-GRPMVFGRNNKGQLGVAS 3476
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 37/322 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ CG NS +LG D ++ +PL I+ + +G ++T
Sbjct: 349 ELYSCGQNSYGELGLGDDIERHQ-------LTSVPLC---GWDHIRQVVSGNEILAILTS 398
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI--MDAVCGQDHTLFLTES 143
+ T G N GQCG G E I L ++ ++A G +H + +T++
Sbjct: 399 DGVVLTCGLNKSGQCGHGNFDER----VMLLRPIQALRSHRVKYINASNGCEHLIAITDT 454
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV---LAVSDKGDVF 200
G YS G+ GQ LGH N T + IE + K+ SA VS G+++
Sbjct: 455 GLAYSWGYNDRGQ--LGH-ENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELY 511
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
+G ++ GQ+ Q STP+++ G + V+ G + G V++ G +
Sbjct: 512 TFGMNDCGQLGLDHTQHQSTPQLVKALLG-HHVSMVSCGLYHMVLCTISGEVFTCGKNDH 570
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
G LG G K +P+ + P V + G AIT+ G Y +G+N
Sbjct: 571 GQLGLGHN-----KQVKVPTQVVL-----PNELVCFVACGYYHATAITSTGLTYSFGRND 620
Query: 317 YGQLGLGTVEDQPFPLKVAVGG 338
YGQLG+G+ Q P+ + +
Sbjct: 621 YGQLGIGSKIHQNIPIALTISS 642
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 54/247 (21%)
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK-GDVF 200
E +++SCG G+ LGH N T L R + ++ + + VL V K G VF
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCN--PTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVF 3188
Query: 201 GWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWGY- 256
G ++ GQ I + ++ P + G+ + AS G + ++ +G VYSWGY
Sbjct: 3189 TCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYN 3248
Query: 257 --GLLGQGPKVSRSMKPTLIPS--------------------------TLFG-------- 280
G LG G VS+S P +I S FG
Sbjct: 3249 DRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLG 3308
Query: 281 ----QHQFNPK-------SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
QHQ P+ KV + G AI + G +Y +GKN+YGQLGL ++
Sbjct: 3309 LDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTK 3368
Query: 330 FPLKVAV 336
P+ V +
Sbjct: 3369 VPMLVKI 3375
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 21/197 (10%)
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAVDCVLAVSDKGDVFGW 202
G++YSCG + G+ GLG ++ E L + G + I ++ S + + ++ G V
Sbjct: 348 GELYSCGQNSYGELGLG--DDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTC 405
Query: 203 GNSEYGQ-----ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY- 256
G ++ GQ E M + + L + + ++ ++G + D GL YSWGY
Sbjct: 406 GLNKSGQCGHGNFDERVMLLRPIQALRSHR--VKYINASNGCEHLIAITDTGLAYSWGYN 463
Query: 257 --GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG ++ P LI S + K++S ++ G LY +G
Sbjct: 464 DRGQLGHENVGTKLYLPKLIESI--------KEKKMKSAAVSYHHSALVSVSGELYTFGM 515
Query: 315 NQYGQLGLGTVEDQPFP 331
N GQLGL + Q P
Sbjct: 516 NDCGQLGLDHTQHQSTP 532
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI E + + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTMDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD----T 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 230 ISWISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 332 DQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G NS+ Q+G D P E+ V P I ++ G H+ +T
Sbjct: 198 KLFMWGDNSEGQIGLEDKSNVCIPHEVT---------VGKP---ISWISCGYYHSAFVTM 245
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +TFG G+ G +++ I E+++ CG HT+ LTE
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIP----ERVIQVACGGGHTVVLTEK-V 300
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+ G G GQ GLG + + + I+ ++I +S + +++ G ++ +G+
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 360
Query: 206 EYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGSACTML 245
+G++ + + C R +A GG C ML
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG--CHML 400
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 227
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 138/333 (41%), Gaps = 51/333 (15%)
Query: 13 FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS-TQIK 71
FT+ T DK +K +G NS QLG GN + V P P T +K
Sbjct: 79 FTLART---DKTVKAWGH--NSAGQLG-----NGGNTNQAV--------PTTVPRLTNVK 120
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
+A G H + + + +++G+NS+GQ G + + + + K + A
Sbjct: 121 DIAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDS----RTVPDRVQGMPKAKQISAG 176
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
C D +L L E+GKVY+ G G GQ G G+ P V G E IVK+ + L
Sbjct: 177 C--DFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGL---EDIVKIDAGCYHAL 231
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ V WG + YGQ+ S + ST V ++ + D+ +G + + V
Sbjct: 232 AITADNTVKSWGYNLYGQLGNSATKSSTVPV--DVDWLTDVSDIEAGAWHNYAMTSDSHV 289
Query: 252 YSWGYGLLGQ--------GPKVSRSMK--PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
Y WG GQ G +SR+ + P IP QH +A G
Sbjct: 290 YGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRLEGVQH-----------LAAGARHG 338
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N GQLG GT + +K+
Sbjct: 339 VAVTADDVFTWGNNSEGQLGNGTTVSRFDSVKI 371
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 30/257 (11%)
Query: 90 FTFGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+G S GQ G +GIV E C I+D + + CG +H++FL E G
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDG 53
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+VY+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 54 EVYTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGA 110
Query: 205 SEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
GQ+ +E ++ PR++ + I+ V+ G C L +G ++WG +G L
Sbjct: 111 GSDGQLGLMTTEDSVAVPRLIQKLN-QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G + P + S + P ++V + G +F A++ G ++ WG N GQ
Sbjct: 170 GLGKEFPSQASPQRVRSL-----EGIPLAQVAA--GGAHSF-ALSLSGAVFGWGMNNAGQ 221
Query: 320 LGLGTVEDQPFPLKVAV 336
LGL +D+ P V +
Sbjct: 222 LGLSDEKDRESPCHVKL 238
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 35/336 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
+ + G +Y +G GQLG G + P P+K
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+ G V+ WG GQ + + L KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL------RTQKVVYISCGEEHTAVLTK 259
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 40/361 (11%)
Query: 6 DIACGYGFTVVATK-SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMS--------- 55
+++CG + V K ++ K++ GL + +LGY P+ K + +
Sbjct: 106 EVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--PKNKADGVAGYQGDFSGDGQED 163
Query: 56 ----FVRIPLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
F P V+ +I ++ G HT+ ++D + +G S+G G+G +
Sbjct: 164 GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYT 223
Query: 111 QGKWFCHN------------IADLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQ 156
+ + + + + + ++ C G H++ T G +++ G G +G+
Sbjct: 224 PVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGR 283
Query: 157 TGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM- 215
GLGH +P +V I IV +++ + +G ++ WG+ +G++ +
Sbjct: 284 LGLGHNRGSLSPAVVD-YILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLI 274
+I PR + GV ++ VA G L +G V++WG GL LG G S +
Sbjct: 343 EIPVPRKVEGFGGVP-VLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAV 401
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
P +H + ++ V ++ AGP A+T G L +WG +LG G ++QPFP V
Sbjct: 402 P-----KHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456
Query: 335 A 335
A
Sbjct: 457 A 457
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG+ HT+ LT +G V+ G DGQ GLG ++ V+ E I +++ L
Sbjct: 507 CGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCL 566
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG--SAC-TML-- 245
AV+ GDVF WG ++ GQ+ ++ S P ++ + + VDV G SAC T L
Sbjct: 567 AVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR---QAVDVFCGDDYSACITSLGG 623
Query: 246 ---------NDEGLVYSWGY---GLLGQGPKVSRS--MKPTLIPSTL------FGQHQFN 285
+ G +++WG G LG G V+ + P + ++ +
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683
Query: 286 PKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
+V + P G AIT G Y WG YG+LG+GT + P +
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTR 736
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 143/370 (38%), Gaps = 65/370 (17%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG T+ T + ++ G N D QLG E V P+ +
Sbjct: 502 LQSLECGESHTIALTGAG----AVWVWGSNDDGQLGLG---------EDVEEDQYEPVKL 548
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ST I+ +A G H + + F +G N GQ G G+V+ A
Sbjct: 549 ECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS-------FEPAAVTA 601
Query: 124 GEKIMDAVCGQDHTLFLT--------------ESGKVYSCGWGADGQTGLGH-------L 162
+ +D CG D++ +T E G +++ G G+ GLG L
Sbjct: 602 LRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSIL 661
Query: 163 NNQET-------PC-LVRGEIEGERIV------KLSSAVDCVLAVSDKGDVFGWGNSEYG 208
Q+ C L E++ + V L S LA++ +G+ + WG YG
Sbjct: 662 TPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYG 721
Query: 209 QIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
++ + TP KGV R+ VA+G L+ +G ++ WG +
Sbjct: 722 RLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDLWFWGR--REDTCSTTN 778
Query: 268 SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
M P + L GQ KV+S+ A A+T G ++ WG N+ Q G G +
Sbjct: 779 YMSPRIF-MQLEGQGGV---PKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQA 834
Query: 328 QPF--PLKVA 335
+ P +VA
Sbjct: 835 ERLDRPERVA 844
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 113/316 (35%), Gaps = 73/316 (23%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + G +H+ I +T+G+ FG+ G G E K + G ++
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRK-----VEGFGGVPVLQ 360
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV----RGEIEGERIVKLSS 185
CG HTL LT G V++ WGA G G + + +IE ++ +++
Sbjct: 361 VACGTFHTLALTHKGTVFA--WGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAA 417
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCK------------GVSR- 231
AV+ GD+ WG ++ + Q P+ ++ + GVSR
Sbjct: 418 GPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRL 477
Query: 232 --------IVDVAS----------------GGSACTMLNDEGLVYSWGY---GLLGQGPK 264
++DV G S L G V+ WG G LG G
Sbjct: 478 KREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED 537
Query: 265 VSRSMKPTLIPSTLFGQHQFNP------KSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
V + Q+ P + + + G A+ +G ++ WG N G
Sbjct: 538 VE--------------EDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNG 583
Query: 319 QLGLGTVEDQPFPLKV 334
QLGLG V P V
Sbjct: 584 QLGLGVVRPSFEPAAV 599
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+F K K+ + G A+++ G LY WG YG LG G D P++V +G +
Sbjct: 176 RFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSE 232
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4152
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4153 VVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTDGS 4211
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4212 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4270
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P +P L G +E + G AIT+ G +Y WG
Sbjct: 4271 DRLIGLPEGRARNHNRPQQVP-VLAG-------VVIEDVAVGAEHTLAITSTGDVYAWGS 4322
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P + V
Sbjct: 4323 NSEGQLGLGHTNHVREPTLITV 4344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLVEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P L+ +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLVEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P LV E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLVE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S GV+ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4246 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQVPVLAGVVIED 4300
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL +T +G VY+ G ++GQ GLGH N+ P L+ ++G+ I ++S+
Sbjct: 4301 VAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLI-TVLQGKNIRQISA 4355
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 4001 KCDVYLWGAGRHGQLAEAGRNVMIP---AGAPSFSQAQQVICGQNCTFVIQANGTVLACG 4057
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4058 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4108
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4109 FSWGDGDYGKLGHGNSDRQRRPRQI 4133
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 22/243 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D + P +LV + V
Sbjct: 2346 RIRDIACGSSHSAAVTSSGE----LYTWGLGEYGRLGHGDSTTQLRP-KLVKALV----- 2395
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +TD +++G+ FG+ GRG +G HN+
Sbjct: 2396 ----GKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG-----GSEGCSVPHNVE 2446
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G+ ++ CG +L LT++G+V++ G G + G G ++ P + G ++G++I
Sbjct: 2447 RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEG-LKGKKI 2505
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ ++ LAV+D G VF WG++++GQ + ++ L Q RI VA G S
Sbjct: 2506 IHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSS 2565
Query: 241 ACT 243
T
Sbjct: 2566 HST 2568
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 30/218 (13%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI--VKLSSAV 187
+ G + TLF +T GK+Y+ G+GA G+ G+G ++ TP L+ I+ I V ++S
Sbjct: 3219 IVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLES-IQHVHIKKVAVNSGG 3277
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+S +G+V+ WG E G++ + Q PRV+ +G ++D+A GG+ +
Sbjct: 3278 KHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRG-KEVIDIACGGAHSACVT 3336
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G +Y+WG YG LG G PK++ ++K + G +G
Sbjct: 3337 SSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACG--------------SG 3382
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
I++ +++ WG YG+LG G + P KV
Sbjct: 3383 DSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKV 3420
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 36/314 (11%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
S++ K+F GLN QLG PR ++ F+ S ++ A G
Sbjct: 2201 SREIQTKVFVWGLNDKDQLG--GPRGSKIKTPVLNEFLS--------SLKVVCCAGGSKS 2250
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
V+T + G + G+ G G Q D + + ++ +K+ G H +
Sbjct: 2251 LFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQ--VNGLSQYVVKKVA-VHSGGRHAMA 2307
Query: 140 LTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
LT GKV+S G G DG+ LGHL+ N E P L+ ++ +RI ++ AV+ G
Sbjct: 2308 LTVDGKVFSWGEGDDGK--LGHLSRMNCEKPRLLEA-LKTKRIRDIACGSSHSAAVTSSG 2364
Query: 198 DVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGG--SACTMLNDEGLVYS 253
+++ WG EYG++ +S Q+ P+++ G R++ VA G + L DEG+VYS
Sbjct: 2365 ELYTWGLGEYGRLGHGDSTTQLR-PKLVKALVG-KRVIQVACGSRDAQTLTLTDEGMVYS 2422
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG +G LG+G S+ + L GQ V + G A+T G ++
Sbjct: 2423 WGDGDFGKLGRGGSEGCSVPHNV--ERLNGQ-------GVIQIECGAQFSLALTKAGQVW 2473
Query: 311 MWGKNQYGQLGLGT 324
WGK Y +LG GT
Sbjct: 2474 TWGKGDYFRLGHGT 2487
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 44/318 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG + V IP V S + K +A +G H +
Sbjct: 2259 KVYACGEGTNGRLGLGSSQN-----------VDIPKQVNGLSQYVVKKVAVHSGGRHAMA 2307
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C + L+ ++I D CG H+
Sbjct: 2308 LTVDGKVFSWGEGDDGKLG--------HLSRMNCEKPRLLEALKTKRIRDIACGSSHSAA 2359
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
+T SG++Y+ G G G+ G G Q P LV+ + G+R+++++ S L ++D+G
Sbjct: 2360 VTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALV-GKRVIQVACGSRDAQTLTLTDEG 2418
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+ WG+ ++G++ + S P + + G ++ + G L G V++WG
Sbjct: 2419 MVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQG-VIQIECGAQFSLALTKAGQVWTWGK 2477
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G S KP + L G+ K+ + G A+T+ G ++ WG
Sbjct: 2478 GDYFRLGHGTD-SHVRKPQ-VAEGLKGK-------KIIHVAVGALHCLAVTDTGQVFAWG 2528
Query: 314 KNQYGQLGLG--TVEDQP 329
N +GQ G G TV +P
Sbjct: 2529 DNDHGQQGDGSTTVNKKP 2546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-RI 180
L K++ G +T GKVY+CG G +G+ GLG N + P V G + +
Sbjct: 2236 LSSLKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKK 2295
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V + S +A++ G VF WG + G++ S M PR+L K RI D+A G
Sbjct: 2296 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALK-TKRIRDIACGS 2354
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
S + G +Y+WG YG LG G ++ ++P L+ + L G+ + S A
Sbjct: 2355 SHSAAVTSSGELYTWGLGEYGRLGHGDSTTQ-LRPKLVKA-LVGKRVI--QVACGSRDAQ 2410
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T +T+ G +Y WG +G+LG G E P V
Sbjct: 2411 TLT---LTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNV 2445
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 22/269 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G + D I L
Sbjct: 3263 IQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRP-----RVIESL 3317
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G++++D CG H+ +T SG++Y+ G G G+ G G +Q P + ++G R++
Sbjct: 3318 RGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADA-LKGYRVID 3376
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L +SD +V+ WG+ +YG++ P+ + + + V G
Sbjct: 3377 VACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIG-VCKVECGS 3435
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 3436 QFSIALTKSGCVYTWGKGDYHRLGHGSD-DHVRRPRKV-AALQGK-------KIISIATG 3486
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
A ++ G +Y WG N GQLG GT
Sbjct: 3487 SLHCVACSDQGEVYTWGDNDEGQLGDGTT 3515
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R +++ + AV
Sbjct: 3172 DWTLSWGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAV 3229
Query: 194 SDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
+ G ++ G G++ ++S +STP +L + V + V V SGG L+ E
Sbjct: 3230 TADGKLYATGYGASGRLGIGGTDS---VSTPTLLESIQHVHIKKVAVNSGGKHALALSVE 3286
Query: 249 GLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + ++ +P +I S L G+ +V + G +T+
Sbjct: 3287 GEVYSWGEGEDGKLGHGNR-TQCDRPRVIES-LRGK-------EVIDIACGGAHSACVTS 3337
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG G EDQ P
Sbjct: 3338 SGELYTWGKGRYGRLGHGDSEDQLRP 3363
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 72 HLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
H+A G T+ +TD F+FGN +G+ GRG G + L+G+ +
Sbjct: 21 HIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRG-----GSDGCKLPKLVDKLQGQHAVI 75
Query: 130 AVCGQDHTLFLTESGKVYSC---GWGADGQTGLG 160
A CG ++ LT++G VY+C W + +G
Sbjct: 76 ACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSVG 109
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ACG G + S D N+ +G G G D K ++ + S
Sbjct: 3373 RVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSI------ 3426
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ + G +I +T + +T+G + + G G +D+ + +A L
Sbjct: 3427 ------GVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHG---SDDHVRR--PRKVAAL 3475
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+G+KI+ G H + ++ G+VY+ G +GQ G G N + P +V
Sbjct: 3476 QGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIV 3524
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G H+ ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 40 LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLG---SKAAVNKPTC--IKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ HT+ TE G VY+ G +GQ GLG + ++T L+ +I +LS+ + A
Sbjct: 95 GRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI ++ + P ++ K +S I + G + +G +
Sbjct: 155 LTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWI---SCGYYHSAFVTIDGEL 211
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK---SKVESLIAGPCTFG--AI 303
Y++G G LG +PS L H+ P+ S + +I C G +
Sbjct: 212 YTFGESESGKLG-------------LPSQLLTNHRI-PQLVSSIPDKVIQVACGGGHTLV 257
Query: 304 TNFGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 258 LTEESVYAFGLGQFGQLGLGT 278
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 36/322 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + + T N KL+ G N+ QLG P + ++ P K
Sbjct: 40 LSCGDEHSAIVTG----NNKLYMFGSNNWGQLGLGSKAAVNKP-----TCIKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HTI+ T+ + G N+ GQ G G E D H I+ +
Sbjct: 89 ---VKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDT-----FHLISFFTSQH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL + N C+ G+ I +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNV---CVPHQVTIGKPISWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ G+++ +G SE G++ ++ R+ + +++ VA GG +
Sbjct: 198 GYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQVACGGGHTLV 257
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +E VY++G +G LG G + + +P ++ ++ K+ S+ G
Sbjct: 258 LTEES-VYAFGLGQFGQLGLGTFIFETSEPKVL--------EYVKGEKIISISCGENHTA 308
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 309 MITDTGGIYTFGDGRHGKLGLG 330
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG +S+ G K G P +L+ + RIP V
Sbjct: 192 ISWISCGYYHSAFVTI--DGELYTFG-----ESESG-----KLGLPSQLLTNH-RIPQLV 238
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ E + FG FGQ G G E + K + ++
Sbjct: 239 SSIPDKVIQVACGGGHTLVLTE-ESVYAFGLGQFGQLGLGTFIFETSEPKVLEY----VK 293
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQ--ETPCLV 171
GEKI+ CG++HT +T++G +Y+ G G G+ GLG + N+ TPC V
Sbjct: 294 GEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSV 345
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + +LF G NS+ Q+G D P ++ +
Sbjct: 141 KIKQLSAGSNTSAALTE----DGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIG------- 189
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
I ++ G H+ +T + +TFG + G+ G +++ +I D
Sbjct: 190 -----KPISWISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPD- 243
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
K++ CG HTL LTE VY+ G G GQ GLG + + V ++GE+I+
Sbjct: 244 ---KVIQVACGGGHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIIS 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTAMITDTGGIYTFGDGRHGKL 327
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG-L 250
V+ ++ +G++ +GQ+ S+ ++ P + K V A+ G T+++ EG
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALK--PEKVKFAACGRTHTIISTEGGN 107
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R T F + K++ L AG T A+T G
Sbjct: 108 VYATGGNNEGQLGLGDTDERD--------TFHLISFFTSQHKIKQLSAGSNTSAALTEDG 159
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL V + P +V +G
Sbjct: 160 QLFMWGDNSEGQIGLKDVTNVCVPHQVTIG 189
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 141/323 (43%), Gaps = 38/323 (11%)
Query: 18 TKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVR-IPLPVKHPSTQIKHLATG 76
T ++ ++ L+ G N LG + P+++ +S VR + + K +
Sbjct: 407 TLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMA 466
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
+ HT+ F +G+N+ G+ G G + I G G H
Sbjct: 467 QVHTL--------FAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAG--------GSAH 510
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
++ L G V++ G+ A GQ G G TP + G ++ +++ V+ +A+S
Sbjct: 511 SVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGM---SGVIDVAAGVNHTVALSAD 567
Query: 197 GDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V WG + YGQ+ + TP+ + + GV+ I ++G + L +G V++WG
Sbjct: 568 GTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI---SAGSTHTVALKADGTVWAWG 624
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LG G RS P +PS V S+ AG A+ G L++W
Sbjct: 625 SNLYGQLGDGTFTHRS-SPVQVPSL----------ENVVSIAAGHFHTVAVKGDGTLWVW 673
Query: 313 GKNQYGQLGLGTVEDQPFPLKVA 335
G GQLGLGT +Q P++V+
Sbjct: 674 GYGPQGQLGLGTTTNQSVPVQVS 696
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
HTL + G +++ G GQ G G + P VRG ++V S+ + +AV++
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL---NQVVSASAGAEHSVAVTE 212
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+ WG++ YGQ+ + + V Q G+S +V VA+ GS L +G V++WG
Sbjct: 213 DGSVWTWGSNAYGQLGDGTNTLRAVPV--QVPGMSDVVAVAAAGSRTVALKADGTVWTWG 270
Query: 256 Y---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
G LG G + S+ P +P+ S V ++ AG A+ G + W
Sbjct: 271 INSSGELGDG-TTTHSLLPIQVPNL----------SGVTNIAAGLWHTLAVKKDGSAWSW 319
Query: 313 GKNQYGQLGLGTVEDQPFPLKVA 335
G N YGQLG GT ++ P+ VA
Sbjct: 320 GNNAYGQLGDGTTLNRLRPVLVA 342
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 144/341 (42%), Gaps = 51/341 (14%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M + D+A G TV S D + +G N+ QLG + P +
Sbjct: 548 MSGVIDVAAGVNHTVA--LSADGTVAAWG--YNAYGQLGNGTTANQLTPQSV-------- 595
Query: 61 LPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P + ++ G HT+ + + + +G+N +GQ G G F H
Sbjct: 596 -----PELDGVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGT----------FTHRS 640
Query: 120 ADLEG---EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ ++ E ++ G HT+ + G ++ G+G GQ GLG NQ P V G
Sbjct: 641 SPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGL-- 698
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
V +++ +A+ G V+ WG + GQ+ ++ + VL G++ ++ +A
Sbjct: 699 -GHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVL--VPGLTNVIALA 755
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+GG +L +G V+++GY G LG G SRS PT +TL + V L
Sbjct: 756 AGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRS-SPT---ATLM--------NSVVDL 803
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+G + + G N GQLG GT +P P++V
Sbjct: 804 SSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQV 844
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G HT+ + + +GNN GQ G G + + + N +++ A
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN-------QVVSASA 202
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H++ +TE G V++ G A GQ G G + P V G + +V +++A +A
Sbjct: 203 GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD---VVAVAAAGSRTVA 259
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G V+ WG + G++ + S + Q +S + ++A+G + +G +
Sbjct: 260 LKADGTVWTWGINSSGELGDGTTTHSLLPI--QVPNLSGVTNIAAGLWHTLAVKKDGSAW 317
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG G ++R ++P L+ + V +L G A+ G
Sbjct: 318 SWGNNAYGQLGDGTTLNR-LRPVLVAGL----------TGVRALSGGVVHTVALKWDGTA 366
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ WG N GQLG GT + P++VA
Sbjct: 367 WGWGYNSAGQLGNGTTTNSSIPVQVA 392
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+PV+ P + + +A + T+ + + +T+G NS G+ G G +
Sbjct: 237 VPVQVPGMSDVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTHSL-----LPIQV 291
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+L G + + G HTL + + G +S G A GQ G G N+ P LV G + G R
Sbjct: 292 PNLSG--VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAG-LTGVR 348
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
LS V +A+ G +GWG + GQ+ S+ V Q +++ V++ +GG
Sbjct: 349 --ALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPV--QVAALTQAVEIDAGG 404
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPST---LFGQHQFNPKSKVESL 293
+G +Y+WG YG LG G S S+ P +P + FG + ++ + +
Sbjct: 405 YHTLARRQDGTLYAWGDNFYGALGTGNTTSSSV-PVQVPLSGVRWFGAGYYYSVAERKKV 463
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+ L+ WG N G+LG GT + P V V G
Sbjct: 464 --------NMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSG 500
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 46/322 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
L+ G N QLG ++ P + Q+ + G H++ +T+
Sbjct: 165 SLWAWGNNPSGQLGNGQRTQRNAPTRV------------RGLNQVVSASAGAEHSVAVTE 212
Query: 86 NEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
+ +T+G+N++GQ G G ++ Q ++D ++ T+ L
Sbjct: 213 DGSVWTWGSNAYGQLGDGTNTLRAVPVQ----VPGMSD-----VVAVAAAGSRTVALKAD 263
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G V++ G + G+ G G + P V + G + +++ + LAV G + WG
Sbjct: 264 GTVWTWGINSSGELGDGTTTHSLLPIQVP-NLSG--VTNIAAGLWHTLAVKKDGSAWSWG 320
Query: 204 NSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWGY---GL 258
N+ YGQ+ + + + P +++ GV + SGG T+ L +G + WGY G
Sbjct: 321 NNAYGQLGDGTTLNRLRPVLVAGLTGVRAL----SGGVVHTVALKWDGTAWGWGYNSAGQ 376
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + S IP Q ++ + AG A G LY WG N YG
Sbjct: 377 LGNGTTTNSS-----IPV------QVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYG 425
Query: 319 QLGLGTVEDQPFPLKVAVGGQK 340
LG G P++V + G +
Sbjct: 426 ALGTGNTTSSSVPVQVPLSGVR 447
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%)
Query: 55 SFVRIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQ 111
+F PV+ PS + + +A G HT+ + + + +G GQ G G Q Q
Sbjct: 635 TFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQ 694
Query: 112 GKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
H +A G HT+ L +G+V++ G+ + GQ G + + +P LV
Sbjct: 695 VSGLGHAVA---------IAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLV 745
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR 231
G ++ L++ + G V+ +G + GQ+ + +T R ++
Sbjct: 746 PGLTN---VIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGT---TTSRSSPTATLMNS 799
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPST 277
+VD++SG + L + V + GY GQ + + +PT + T
Sbjct: 800 VVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQVT 845
>gi|363734309|ref|XP_421009.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Gallus gallus]
Length = 394
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 57 VRIPLPVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
V +P +K S + IK +A G H+ VIT F G+N GQ G+ ED
Sbjct: 18 VLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQ--LGLNHTEDVLCF 75
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
C L G + + CG D T+ L +G V SCG A GQ G+ ++ PCL+
Sbjct: 76 TLC---TALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISG---PCLIPQ 129
Query: 174 EIE---GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-----Q 225
+I+ E+ V +++ + LA ++ G VF WG + + P + +
Sbjct: 130 KIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCE 189
Query: 226 CKGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM---KPTLIPSTLFG 280
KG+ ++ VA+G C L EG +Y WG GQ VS+ + +P I +
Sbjct: 190 IKGLEDVKVKRVAAGSYHCVSLTGEGHLYVWGSNKHGQ--LVSKEVFLVEPKKIDT---- 243
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
QF K+ ++ +G A T G ++ WG+ YGQLG V
Sbjct: 244 --QFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAV 286
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 10/232 (4%)
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG 152
G NS+GQ G G +ED +++ + + I G H+ +T +G+++ CG
Sbjct: 3 GANSYGQLGLG--HKEDVLVPQLLKDVS-CKCQDIKSIAGGGGHSAVITGAGELFVCGHN 59
Query: 153 ADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
GQ GL H + L + G + +++ D + + G V G++ +GQ+
Sbjct: 60 KAGQLGLNHTEDVLCFTLCTA-LSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGV 118
Query: 213 SEMQISTPRVLSQCKGVS---RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM 269
QIS P ++ Q S + V +A+G + GLV+ WG G+ + +V +
Sbjct: 119 P--QISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGK 176
Query: 270 K-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
P + + + KV+ + AG ++T GHLY+WG N++GQL
Sbjct: 177 TLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSLTGEGHLYVWGSNKHGQL 228
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG+ FT++ ++ + CG N+ QLG P+ G L IP +
Sbjct: 86 VQEVACGWDFTIILGRAG----LVLSCGSNAFGQLGV--PQISGPCL--------IPQKI 131
Query: 64 KHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNI 119
K + +A G H + T++ F +G + R G + K C I
Sbjct: 132 KQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPC-EI 190
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
LE K+ G H + LT G +Y WG++ G L ++E + +I+
Sbjct: 191 KGLEDVKVKRVAAGSYHCVSLTGEGHLYV--WGSNKH---GQLVSKEVFLVEPKKIDTQF 245
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E+I + S ++A ++ G VF WG ++YGQ+
Sbjct: 246 FSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQL 281
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 22/251 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +G+ G+ G G +++E+ + + +I CG+++T+ +T+ G++YSC
Sbjct: 29 FCWGSTIHGELGLGGIEDENI---LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSC 85
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ LGH ++ L+ G ++ K + LA+++ G +F WG++ GQ
Sbjct: 86 GNNDYGQ--LGHEKGRKRLQLIPG-LDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQ 142
Query: 210 I---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGP 263
+ S++ M+ S+PR++ G S +V +A G L + G +YSWG G LG G
Sbjct: 143 LGLNSKNFME-SSPRMVKTL-GTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGT 200
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+KP I S G + + G AI+ G ++ WGKN +GQLGL
Sbjct: 201 DTKYEIKPKFI-SAFIG-------IPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLN 252
Query: 324 TVEDQPFPLKV 334
+D+ P ++
Sbjct: 253 DTQDRNLPCQL 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG T N +L+ G NS+ QLG K + + +F+ IP
Sbjct: 166 VVQIACGMKHAFALTN----NGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIP--- 218
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I +A G H+I I+ + F +G N+FGQ G D Q + + L+
Sbjct: 219 ------IAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLN-----DTQDRNLPCQLQTLQ 267
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
KI A CG++ ++FLT G V++CG G GQ G G +N+ P V E+ G + ++
Sbjct: 268 NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-ELMGSTVTQI 326
Query: 184 SSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVL 223
S LA V +G V+ WG GQ+ + S ++TP+V+
Sbjct: 327 SCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 136/323 (42%), Gaps = 33/323 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I IACG +TVV T+ + ++ CG N QLG+ RK+ + + +FV
Sbjct: 62 EIQQIACGENYTVVITQIGE----IYSCGNNDYGQLGHEKGRKRLQLIPGLDAFV----- 112
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K A G HT+ I + F++G+N+ GQ G + + + L
Sbjct: 113 -------FKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRM----VKTL 161
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
++ CG H LT +G++YS G ++GQ GLG E G I
Sbjct: 162 GTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAF 221
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ +A+S G VFGWG + +GQ+ ++ Q Q ++I A G
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFS 281
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-C 298
L +G V++ G YG LG G S + P + L G S V + G
Sbjct: 282 VFLTVDGGVFTCGAGMYGQLGHGSN-SNEILPRQV-MELMG-------STVTQISCGKRH 332
Query: 299 TFGAITNFGHLYMWGKNQYGQLG 321
T + + G +Y WG GQLG
Sbjct: 333 TLALVPSRGRVYAWGLGGAGQLG 355
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I+ +A G +T+VIT ++ GNN +GQ G +G+ I L+
Sbjct: 60 AAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHE-------KGRKRLQLIPGLDAFV 112
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
A CG HTL + E G+++S G +GQ GL N E+ + + +V+++
Sbjct: 113 FKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ A+++ G+++ WG++ GQ+ ++++ +I P+ +S G+ I +A GG
Sbjct: 173 MKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIK-PKFISAFIGIP-IAFIACGGYHSI 230
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
++ G V+ WG +G LG R++ Q Q +K+ G
Sbjct: 231 AISKSGAVFGWGKNTFGQLGLNDTQDRNLP---------CQLQTLQNAKICYAACGEEFS 281
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ G YGQLG G+ ++ P +V
Sbjct: 282 VFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQV 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I IACG ++ +KS +FG G N+ QLG +D + + P +L
Sbjct: 217 IPIAFIACGGYHSIAISKSG----AVFGWGKNTFGQLGLNDTQDRNLPCQLQTL------ 266
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ +I + A G ++ +T + G FT G +GQ G G E + +
Sbjct: 267 ----QNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNE-----ILPRQVME 317
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HTL L S G+VY+ G G GQ G + TP +V G
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHG 370
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 196 KGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
K D+F WG++ +G++ E E I PR L K + I +A G + ++ G +
Sbjct: 25 KKDMFCWGSTIHGELGLGGIEDE-NILIPRELD-FKKAAEIQQIACGENYTVVITQIGEI 82
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
YS G GQ + LIP G F K G AI +G L+
Sbjct: 83 YSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAA----CGAYHTLAINEWGQLFS 134
Query: 312 WGKNQYGQLGLGT 324
WG N GQLGL +
Sbjct: 135 WGSNTEGQLGLNS 147
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 40/361 (11%)
Query: 6 DIACGYGFTVVATK-SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMS--------- 55
+++CG + V K ++ K++ GL + +LGY P+ K + +
Sbjct: 106 EVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--PKNKADGVAGYQGDFSGDGQED 163
Query: 56 ----FVRIPLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
F P V+ +I ++ G HT+ ++D + +G S+G G+G +
Sbjct: 164 GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYT 223
Query: 111 QGKWFCHN------------IADLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQ 156
+ + + + + + ++ C G H++ T G +++ G G +G+
Sbjct: 224 PVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGR 283
Query: 157 TGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM- 215
GLGH +P +V I IV +++ + +G ++ WG+ +G++ +
Sbjct: 284 LGLGHNRGSLSPAVVD-YILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLI 274
+I PR + GV ++ VA G L +G V++WG GL LG G S +
Sbjct: 343 EIPVPRKVEGFGGVP-VLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAV 401
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
P +H + ++ V ++ AGP A+T G L +WG +LG G ++QPFP V
Sbjct: 402 P-----KHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456
Query: 335 A 335
A
Sbjct: 457 A 457
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG+ HT+ LT +G V+ G DGQ GLG ++ V+ E I +++ L
Sbjct: 507 CGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCL 566
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG--SAC-TML-- 245
AV+ GDVF WG ++ GQ+ ++ S P ++ + + VDV G SAC T L
Sbjct: 567 AVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR---QAVDVFCGDDYSACITSLGG 623
Query: 246 ---------NDEGLVYSWGY---GLLGQGPKVSRS--MKPTLIPSTL------FGQHQFN 285
+ G +++WG G LG G V+ + P + ++ +
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683
Query: 286 PKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
+V + P G AIT G Y WG YG+LG+GT + P +
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTR 736
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 143/370 (38%), Gaps = 65/370 (17%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG T+ T + ++ G N D QLG E V P+ +
Sbjct: 502 LQSLECGESHTIALTGAG----AVWVWGSNDDGQLGLG---------EDVEEDQYEPVKL 548
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ ST I+ +A G H + + F +G N GQ G G+V+ A
Sbjct: 549 ECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS-------FEPAAVTA 601
Query: 124 GEKIMDAVCGQDHTLFLT--------------ESGKVYSCGWGADGQTGLGH-------L 162
+ +D CG D++ +T E G +++ G G+ GLG L
Sbjct: 602 LRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSIL 661
Query: 163 NNQET-------PC-LVRGEIEGERIV------KLSSAVDCVLAVSDKGDVFGWGNSEYG 208
Q+ C L E++ + V L S LA++ +G+ + WG YG
Sbjct: 662 TPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYG 721
Query: 209 QIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
++ + TP KGV R+ VA+G L+ +G ++ WG +
Sbjct: 722 RLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDLWFWGR--REDTCSTTN 778
Query: 268 SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
M P + L GQ KV+S+ A A+T G ++ WG N+ Q G G +
Sbjct: 779 YMSPRIF-MQLEGQGGV---PKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQA 834
Query: 328 QPF--PLKVA 335
+ P +VA
Sbjct: 835 ERLDRPERVA 844
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 113/316 (35%), Gaps = 73/316 (23%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I + G +H+ I +T+G+ FG+ G G E K + G ++
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRK-----VEGFGGVPVLQ 360
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV----RGEIEGERIVKLSS 185
CG HTL LT G V++ WGA G G + + +IE ++ +++
Sbjct: 361 VACGTFHTLALTHKGTVFA--WGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAA 417
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCK------------GVSR- 231
AV+ GD+ WG ++ + Q P+ ++ + GVSR
Sbjct: 418 GPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRL 477
Query: 232 --------IVDVAS----------------GGSACTMLNDEGLVYSWGY---GLLGQGPK 264
++DV G S L G V+ WG G LG G
Sbjct: 478 KREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED 537
Query: 265 VSRSMKPTLIPSTLFGQHQFNP------KSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
V + Q+ P + + + G A+ +G ++ WG N G
Sbjct: 538 VE--------------EDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNG 583
Query: 319 QLGLGTVEDQPFPLKV 334
QLGLG V P V
Sbjct: 584 QLGLGVVRPSFEPAAV 599
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+F K K+ + G A+++ G LY WG YG LG G D P++V +G +
Sbjct: 176 RFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSE 232
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 146/335 (43%), Gaps = 32/335 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ I+CG + V +S +LF G N QLG P S V++ P
Sbjct: 27 VISISCGDEHSAVICQSG----RLFVFGSNDWGQLGLGHKNHISKP-----SCVKVLKPE 77
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A GRAHT++ T E F G++ GQ GRGI D +
Sbjct: 78 K-----VTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYDSGPT 132
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN---NQETPCLVRGEIEGERI 180
G KI+ V G H+L LT G V++ G +GQ GL ++ N+ T + E +
Sbjct: 133 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHI-----PEPV 187
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ + +++ G V+ G SE G++ ++ ST V Q + S ++ VA GG
Sbjct: 188 KQINTGYYHSIFLTENGLVYVCGESESGKLG-IDINFSTQIVPKQMQLPSPVIHVACGGH 246
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L ++ +Y G G LG G V+ P L+P K+ + G
Sbjct: 247 HTVILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNE------KISHISCGE 300
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
+T G LY G ++G+LGL E+ L
Sbjct: 301 SHTAILTESGKLYTCGDGRHGKLGLEENENNVHEL 335
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 115 FCHNIAD---LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
F N+A + + ++ CG +H+ + +SG+++ G GQ GLGH N+ P V
Sbjct: 12 FADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCV 71
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI----STPRVLSQCK 227
+ ++ E++ ++ L + +F G+ + GQ+ I S P ++
Sbjct: 72 KV-LKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYDSG 130
Query: 228 GV-SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSM-KPTLIPSTLFGQHQ 283
S+IV + +G L +G V++WG L GQ P +S + KPT + H
Sbjct: 131 PTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKV-------HI 183
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
P V+ + G +T G +Y+ G+++ G+LG+
Sbjct: 184 PEP---VKQINTGYYHSIFLTENGLVYVCGESESGKLGI 219
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 121/271 (44%), Gaps = 29/271 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G AHT + + FT+G N GQ G QE Q E +
Sbjct: 45 VACGGAHTAAVAVDGSVFTWGLNDHGQLGHYTHQEFSMQ-----EPQEVFLPEAAVQVAM 99
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVDCVL 191
G HTLFLTES V++ G GQ GL QE P V+ ++ G +I+ +++ L
Sbjct: 100 GHSHTLFLTESSSVWAVGSNMHGQLGLRRRGGQEWVPRRVQ-DLVGTKIIGIAAGAQHSL 158
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI------STPRVLSQCKGVSRIVDVASGG---SAC 242
AVS G++F WG G + S PR++ + KG+ +V A+GG S C
Sbjct: 159 AVSADGELFTWGGDTRGCLGHGRSSFAATQDESAPRLVKKLKGI--MVQSAAGGLMNSGC 216
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
N G Y WG L Q P ++++ P L G V+ L G A
Sbjct: 217 VDAN--GAAYFWGP-YLRQSP-LTKAATEANEPEVLSGVQ------NVKQLALGGRHLVA 266
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
+T+ G + +G ++YG LGLG+ D P P +
Sbjct: 267 LTHGGRVATYGTSEYGLLGLGS-SDPPSPFQ 296
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 197 GDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V WGN +YG++ + ++ P ++ + + VA GG+ + +G V++WG
Sbjct: 7 GKVACWGNGDYGRLGHDCAKSLAVPSLVPALIN-QKFLSVACGGAHTAAVAVDGSVFTWG 65
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
+G LG SM+ Q F P++ V+ + T +T ++
Sbjct: 66 LNDHGQLGHYTHQEFSMQEP--------QEVFLPEAAVQVAMGHSHTL-FLTESSSVWAV 116
Query: 313 GKNQYGQLGL 322
G N +GQLGL
Sbjct: 117 GSNMHGQLGL 126
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 17/251 (6%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+A G+ T+ T+S ++ G N QLG R++G E V V+ +
Sbjct: 97 VAMGHSHTLFLTESS----SVWAVGSNMHGQLGL---RRRGGQ-EWVPRRVQDLV----- 143
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
T+I +A G H++ ++ + FT+G ++ G G G Q + + L+G
Sbjct: 144 GTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGHGRSSFAATQDESAPRLVKKLKGIM 203
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ A G ++ + +G Y G P ++ G + + +L+
Sbjct: 204 VQSAAGGLMNSGCVDANGAAYFWGPYLRQSPLTKAATEANEPEVLSGV---QNVKQLALG 260
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
++A++ G V +G SEYG + +P + VS + VA+G +
Sbjct: 261 GRHLVALTHGGRVATYGTSEYGLLGLGSSDPPSPFQPTLIPDVS-LEQVAAGWQHSAGVT 319
Query: 247 DEGLVYSWGYG 257
+G + +WG+G
Sbjct: 320 SDGQLLTWGWG 330
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 88.6 bits (218), Expect = 4e-15, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+ATG H++ + + + +G+NS GQ G G D + L G+ ++
Sbjct: 236 IATGYEHSLALASDGIVYAWGDNSEGQLGDG--STTDSKVPMAVDRTGVLTGKTVVAIAA 293
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVL 191
G++H+L + G VY+ G Q G G L + P V E+ G+ + ++ L
Sbjct: 294 GRNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSL 353
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS----RIVDVASGGSACTMLND 247
A + G V+ WG++ GQ+ ++ + P +S G + IV VA+GG L
Sbjct: 354 AQASDGTVYAWGDNTNGQMGDTIAHLK-PAPVSVTGGSALAGKTIVAVAAGGYHNLALAS 412
Query: 248 EGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+G V +WGY GQ G S + + + +P + + P + ++ AG A+ +
Sbjct: 413 DGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAV-NSYGALPGKTIVAVGAGVSHSLALASD 471
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
G L WG N GQLG + ++ P+ V+ GG
Sbjct: 472 GALCTWGFNSQGQLGDNSTTNRTVPVTVSAGG 503
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 14/272 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--VQEEDYQGKWFCHNIADLEGEKIMDA 130
LAT H++ + + + +G N+ GQ G G + + + L G+ I+
Sbjct: 177 LATSYRHSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAI 236
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV--RGEIEGERIVKLSSAVD 188
G +H+L L G VY+ G ++GQ G G + + P V G + G+ +V +++ +
Sbjct: 237 ATGYEHSLALASDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRN 296
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQCKGVSRIVDVASGGSACTML 245
LAV+ G V+ WG++ Y Q+ + + + P L++ G S + DVA G
Sbjct: 297 HSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKS-VADVAGGDRHSLAQ 355
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
+G VY+WG GQ +KP P ++ G K+ V ++ AG A+ +
Sbjct: 356 ASDGTVYAWGDNTNGQMGDTIAHLKPA--PVSVTGGSALAGKTIV-AVAAGGYHNLALAS 412
Query: 306 FGHLYMWGKNQYGQLG---LGTVEDQPFPLKV 334
G + WG N GQLG G E P+ V
Sbjct: 413 DGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAV 444
Score = 71.6 bits (174), Expect = 5e-10, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 25/265 (9%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD----LEGEKIMDAVCGQDHTLFLTESG 144
++ +G+NS GQ G G K AD L G+ ++ H+L L G
Sbjct: 134 SYAWGDNSKGQLGNG--TGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASDG 191
Query: 145 KVYSCGWGADGQTGLG----HLNNQETPCLV--RGEIEGERIVKLSSAVDCVLAVSDKGD 198
VY+ G+ A+GQ G G + + P V G + G+ I+ +++ + LA++ G
Sbjct: 192 TVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASDGI 251
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGV---SRIVDVASGGSACTMLNDEGLVYSWG 255
V+ WG++ GQ+ + S + GV +V +A+G + + +G VY+WG
Sbjct: 252 VYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYAWG 311
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y LG G S+ + + L G+ V + G A + G +Y W
Sbjct: 312 DNYYAQLGDGSLTDSSVPVPVDLTELAGK-------SVADVAGGDRHSLAQASDGTVYAW 364
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAVG 337
G N GQ+G +P P+ V G
Sbjct: 365 GDNTNGQMGDTIAHLKPAPVSVTGG 389
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 59 IPLPV---KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+P+PV + + +A G H++ + + +G+N+ GQ G I +
Sbjct: 328 VPVPVDLTELAGKSVADVAGGDRHSLAQASDGTVYAWGDNTNGQMGDTIAHLK--PAPVS 385
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG---LGHLNNQETPCLVR 172
+ L G+ I+ G H L L G V + G+ +GQ G G P V
Sbjct: 386 VTGGSALAGKTIVAVAAGGYHNLALASDGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVN 445
Query: 173 --GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
G + G+ IV + + V LA++ G + WG + GQ+ ++
Sbjct: 446 SYGALPGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDN 488
>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 732
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 32/287 (11%)
Query: 50 LELVMSFVRIPLPV------------KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSF 97
L ++++ +P+P+ P+ LA G + + + +G+NS
Sbjct: 14 LIMIIASTIVPVPLLGGPTPVLASTDARPAAASSQLAAGANFGLAVDAQGNVWAWGDNSE 73
Query: 98 GQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
GQ G+G+ + DL ++ G H L L G V++ G Q
Sbjct: 74 GQLGQGVADTNPVATP---IQVKDL--TNVISVSAGGVHALALKADGTVWAWGNNETDQL 128
Query: 158 GLGHLNNQETPCLVRGEIEG-ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESE 214
G+ +Q +P + ++EG + IV +++ ++ LA+S G V+ WG +EY QI+
Sbjct: 129 GV----DQASPIAIPRQVEGLQNIVAIAAGLEFSLALSSDGKVWAWGANEYKQINYFSDA 184
Query: 215 MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLI 274
++I+TP++++ GV V +A+G + C L ++G V++WG + G +
Sbjct: 185 IKIATPQIVNNLSGV---VKIAAGSAWCLALKNDGTVWTWGAQKVPMGNDDQDGEVTNIT 241
Query: 275 PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
T Q N S V S+ AG A+ G ++ WG N+ QLG
Sbjct: 242 NLT-----QINGISDVISVSAGYSHSLALKGDGTVWGWGSNELLQLG 283
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 139/358 (38%), Gaps = 79/358 (22%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D ++ G NS+ QLG NP V P+ VK T + ++ G H +
Sbjct: 60 DAQGNVWAWGDNSEGQLGQG--VADTNP-------VATPIQVKD-LTNVISVSAGGVHAL 109
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA---DLEG-EKIMDAVCGQDHT 137
+ + + +GNN Q G V + IA +EG + I+ G + +
Sbjct: 110 ALKADGTVWAWGNNETDQLG---VDQ--------ASPIAIPRQVEGLQNIVAIAAGLEFS 158
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQ---ETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
L L+ GKV++ WGA+ + + ++ TP +V + G +VK+++ LA+
Sbjct: 159 LALSSDGKVWA--WGANEYKQINYFSDAIKIATPQIVN-NLSG--VVKIAAGSAWCLALK 213
Query: 195 DKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG + ++ + +++ L+Q G+S ++ V++G S L +G V+
Sbjct: 214 NDGTVWTWGAQKVPMGNDDQDGEVTNITNLTQINGISDVISVSAGYSHSLALKGDGTVWG 273
Query: 254 WGYGLLGQ----------GPKVSRSMKPTLIPST--------------------LFGQHQ 283
WG L Q P +K S ++GQ
Sbjct: 274 WGSNELLQLGSHDQQWFDSPVQISPLKNVTTVSAGAYLTMALTNDGTVWTLGGNIYGQLG 333
Query: 284 FNPKSKVESLIAGPCTFGAITN---------------FGHLYMWGKNQYGQLGLGTVE 326
K+ + A P IT G ++ WG N GQLG G V
Sbjct: 334 NGIKADSLPITAYPVKASNITQATSISAGYGFALGRALGSVWGWGDNSKGQLGAGIVN 391
>gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 36/261 (13%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + +AD E ++ A CG++HT
Sbjct: 134 AHSLLITTEGKLWSWGRNEKGQLGHGDTKR--LEAPKLIEALAD---EVVVAAACGRNHT 188
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
L LTE G YS G GQ G G+ + +P L+ + G+ +VK++ + + V K
Sbjct: 189 LALTEGGTAYSFGENKLGQLGQGNQTDAVLSPALI--QYNGQPLVKVACGAEFSMVVDCK 246
Query: 197 GDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV-------------------- 233
G+++ +G EYGQ+ S+ + R+ C+ ++R V
Sbjct: 247 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVV 306
Query: 234 -DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
DVA GG+ +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 307 RDVACGGNHTLILDSQKRVFSWGFG--GYGRLGHTEQKDEMVPR-LVKLFDFPGRGASQI 363
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
C+F A+ G L+ WG
Sbjct: 364 YTGYQCSF-AVNEMGGLFFWG 383
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ACG T+ T+ + G N QLG +GN + V+S P +
Sbjct: 178 VVAAACGRNHTLALTEGG----TAYSFGENKLGQLG------QGNQTDAVLS----PALI 223
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIA 120
++ + +A G ++V+ ++FG +GQ G G + ++ C IA
Sbjct: 224 QYNGQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIA 283
Query: 121 D-----LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
+E K + D CG +HTL L +V+S G+G G+ G +
Sbjct: 284 RRVAIFIEKSKDGQVTPVPNVVVRDVACGGNHTLILDSQKRVFSWGFGGYGRLGHTEQKD 343
Query: 165 QETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ P LV+ + G ++ + C AV++ G +F WG + + ES M P+ +
Sbjct: 344 EMVPRLVKLFDFPGRGASQIYTGYQCSFAVNEMGGLFFWGVTNTSR--ESTM---YPKAV 398
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRS 268
G ++ +A G S+ + D+ + SWG +G LG G ++S
Sbjct: 399 QDLCGW-KVRSLACGKSSIVIAADDSTI-SWGPSPTFGELGYGDNKAKS 445
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG +E GQ+ + + L + +V A G + L + G
Sbjct: 137 LLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGT 196
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF- 306
YS+G G LGQG + + P LI Q+N + V+ +A F + +
Sbjct: 197 AYSFGENKLGQLGQGNQTDAVLSPALI--------QYNGQPLVK--VACGAEFSMVVDCK 246
Query: 307 GHLYMWGKNQYGQLG 321
G+LY +G +YGQLG
Sbjct: 247 GNLYSFGCPEYGQLG 261
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 33/257 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G GQ G GI +E++ W C + LE K+ V G ++L + + GK+++
Sbjct: 8 IAWGAGEDGQLGIGINEEKE----WVC-VVNALEPYKVRSVVAGSRNSLAICDDGKLFTW 62
Query: 150 GWGADGQTGLGHLNNQET---PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH +T P V+ + IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPAETKTENIPSQVKA-LNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + T + L +C + VA+GG+ +L EG V++WG
Sbjct: 120 YGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ-- 177
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P +K +P + G KV+ + G A+ G L+ WG N+YG
Sbjct: 178 ----PWPPGDIKQISVPVRVQGL------EKVKLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 319 QLGLGTVE--DQPFPLK 333
QLG G + QP P++
Sbjct: 228 QLGTGDTQPRSQPIPVQ 244
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 27/314 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVIT 84
KLF G N LG+ K N IP VK + I A G H + +
Sbjct: 58 KLFTWGWNQRGTLGHPAETKTEN----------IPSQVKALNNVNIVQAAIGGWHCLAVD 107
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--GEKIM--DAVCGQDHTLFL 140
D A+ +G N +GQCG +++D GK +I + K++ G H++ L
Sbjct: 108 DQGRAYAWGGNEYGQCGEEPERKDD-TGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVL 166
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G V++ WG G + P V+G +E +++ + + + LA+ + G ++
Sbjct: 167 TREGHVWT--WGQPWPPG--DIKQISVPVRVQG-LEKVKLIAVGAFHN--LALQEDGTLW 219
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WGN+EYGQ+ + Q + + Q +VD+A+GG T L D+G VY WG G G
Sbjct: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHG 279
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+ ++P + + L G A+T G ++ +G+ +G+L
Sbjct: 280 RLGFGDNDKSSKMVPQKV----NLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRL 335
Query: 321 GLGTVEDQPFPLKV 334
G G P++V
Sbjct: 336 GYGKKVTTGQPVEV 349
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 17/220 (7%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ I + CG +H++FL E G+VY+CG GQ LGH P + G + + I+
Sbjct: 32 ISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQ--LGHEREGNKPEQI-GALADQHII 88
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ LA+SD+G +F WG GQ+ + +E ++ PR++ + I+ V+ G
Sbjct: 89 HVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSCGN 147
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
C L +G ++WG +G LG G + P + S + P ++V AG
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL-----EGIPLAQVA---AG 199
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A++ G ++ WG+N GQLGL D+ P V +
Sbjct: 200 GAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKL 239
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G H+I + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 89
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAV 187
CG+ H+L L++ G+++S G G+DGQ LGH +++ + R ++ + I+++S
Sbjct: 90 VACGESHSLALSDQGQLFSWGAGSDGQ--LGHTTTEDSVAIPRLIKKLNQQMILQVSCGN 147
Query: 188 DCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKS-LEGIP-LAQVAAGGAHSFA 205
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L+ G V+ WG G LG + R P + + KV + G
Sbjct: 206 LSLSGAVFGWGRNNAGQLGLSDETDRQ-SPCHV--------KLLRTQKVVYISCGEEHTA 256
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ +G +GQLG ++ D+ P +V
Sbjct: 257 VLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRV 289
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 142/324 (43%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++ACG ++ + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 37 IKEVACGGNHSIFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 83
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G ++ + I L
Sbjct: 84 ---DQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRL----IKKLN 136
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H + L G+ ++ G GQ GLG +Q +P V+ +EG + +
Sbjct: 137 QQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKS-LEGIPLAQ 195
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + ++V ++ G
Sbjct: 196 VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 256 AVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 307
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 308 LAFVPSSGLIYAFGCGARGQLGTG 331
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 260
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG SFGQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 SGGVFTFGAGSFGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 315
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+Y+ G GA GQ G GH N + P V+G +LSS D +F G+
Sbjct: 316 LIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHN-GQLSSRADS-FKYHIVKHIFSGGD 373
Query: 205 SEYGQISESEMQISTP----RVLSQCKGVSRIVD 234
+ S+ E S+P R+++Q + S I D
Sbjct: 374 QTFVLCSKYEN--SSPADDFRIMNQAQYTSLIND 405
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP---LELVMSFVRI 59
K+ I+CG T V TKS +F G S QLG+ + NP LEL+
Sbjct: 244 KVVYISCGEEHTAVLTKSGG----VFTFGAGSFGQLGHDSMNDEVNPRRVLELM------ 293
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRG----IVQEEDYQGKW 114
+++ +A GR HT+ + G + FG + GQ G G + +G W
Sbjct: 294 -------GSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHW 346
Query: 115 FCHN 118
HN
Sbjct: 347 AAHN 350
>gi|296470595|tpg|DAA12710.1| TPA: retinitis pigmentosa GTPase regulator [Bos taurus]
Length = 308
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 10/208 (4%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT + T N F FG+N++GQ G G + K C I L+ EK+ C
Sbjct: 85 LSCGDEHTAITTGNNKLFMFGSNNWGQLGLG---SKATVNKPTC--IKALKPEKVKFVAC 139
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL LT G+VY+ G +GQ GLG + + L+ +I +LS+ + A
Sbjct: 140 GRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAA 199
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLV 251
++ +G+++ +G E G++ + +V G+S +++ VA GG +L ++ V
Sbjct: 200 LTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-V 258
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPS 276
Y++G +G LG G + +P +I S
Sbjct: 259 YTFGLGQFGQLGLGTFTFETSEPKVIES 286
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 37/251 (14%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFL 140
++ D+ FTFG F E+ K WF +I + CG +HT
Sbjct: 52 MVPDSGAVFTFGKTKFA---------ENMPSKFWFKRDIP-------ISLSCGDEHTAIT 95
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T + K++ G GQ GLG P ++ ++ E++ ++ + L ++ G V+
Sbjct: 96 TGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKA-LKPEKVKFVACGRNHTLILTGGGQVY 154
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---Y 256
G + GQ+ + + S ++S +I +++G + L EG +Y++G
Sbjct: 155 ATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPES 214
Query: 257 GLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG--AITNFGHLYMWG 313
G LG PK+ + K P L+P E +I C G + +Y +G
Sbjct: 215 GKLGLPPKLLVNHKVPQLVPGI------------SEKVIQVACGGGHTVVLTEKAVYTFG 262
Query: 314 KNQYGQLGLGT 324
Q+GQLGLGT
Sbjct: 263 LGQFGQLGLGT 273
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
Query: 6 DIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
++CG T + T N KLF G N+ QLG P + ++ P K
Sbjct: 84 SLSCGDEHTAITTG----NNKLFMFGSNNWGQLGLGSKATVNKP-----TCIKALKPEK- 133
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+K +A GR HT+++T + G N+ GQ G G E H I+ +
Sbjct: 134 ----VKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSA-----FHLISFFTSQ 184
Query: 126 -KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIVK 182
KI G + + LT G++Y+ G G+ GL L N + P LV G E++++
Sbjct: 185 HKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPG--ISEKVIQ 242
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ + +++K V+ +G ++GQ + + S P+V+ K +I V G +
Sbjct: 243 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKD-KKISHVCCGEN 300
Query: 241 ACTMLND 247
++ +
Sbjct: 301 HTALITE 307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 12 GFTVVATKSKDKNLKLFGCGLNSDSQL---------GYHDPRKKGNPLELVMSFVRIPLP 62
F +++ + +K G N+ + L G + K G P +L+++ ++P
Sbjct: 174 AFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNH-KVPQL 232
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V S ++ +A G HT+V+T+ + +TFG FGQ G G E + K I +
Sbjct: 233 VPGISEKVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFTFETSEPKV----IESV 287
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
+ +KI CG++HT +TES
Sbjct: 288 KDKKISHVCCGENHTALITES 308
>gi|111220790|ref|YP_711584.1| hypothetical protein FRAAL1334 [Frankia alni ACN14a]
gi|111148322|emb|CAJ59994.1| hypothetical protein; putative signal peptide [Frankia alni ACN14a]
Length = 408
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L + SG +S G+ GQ G G + N P V G +V +++ AV G
Sbjct: 40 LAVAGSGTEWSWGYNGLGQLGNGTITNSAVPVRVSGLTGLTDVVGVAAGRYAAYAVRRDG 99
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY- 256
+ WG + YGQ+ + ST V + G++R+V +A G L +G V++WGY
Sbjct: 100 TAWSWGYNAYGQLGNGRITNSTVPV--RVSGLTRVVALAGGAVNGYALRQDGTVWAWGYN 157
Query: 257 --GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G ++ + +P + G S+V ++ G T A+ G ++ WG
Sbjct: 158 NYGQLGNG-----TITNSRVPVRVLGL------SRVVAIAGGGTTAYAVRQDGTVWAWGD 206
Query: 315 NQYGQLGLGTVEDQPFPLKV 334
N GQLG GT + PFP++V
Sbjct: 207 NDEGQLGNGTTANSPFPVRV 226
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 107/246 (43%), Gaps = 19/246 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLTESGKVYS 148
+++G N GQ G G + + ++ L G ++ G+ + G +S
Sbjct: 49 WSWGYNGLGQLGNGTITNSAVPVR-----VSGLTGLTDVVGVAAGRYAAYAVRRDGTAWS 103
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G+ A GQ G G + N P V G R+V L+ A+ G V+ WG + YG
Sbjct: 104 WGYNAYGQLGNGRITNSTVPVRVSGL---TRVVALAGGAVNGYALRQDGTVWAWGYNNYG 160
Query: 209 QISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
Q+ I+ RV + G+SR+V +A GG+ + +G V++WG GQ + +
Sbjct: 161 QLGNGT--ITNSRVPVRVLGLSRVVAIAGGGTTAYAVRQDGTVWAWGDNDEGQLGNGTTA 218
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
P P + G S V ++ G T A+ G ++ WG N GQLG GT
Sbjct: 219 NSP--FPVRVTGL------SAVIAIAGGQETGYALRRDGTVWAWGANDEGQLGNGTTVSS 270
Query: 329 PFPLKV 334
P+ +
Sbjct: 271 TVPVAI 276
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 31/318 (9%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS--TQIKHLATGRAHT 80
++L + G G ++ GY+ + GN ++ +P+ V + T + +A GR
Sbjct: 38 QHLAVAGSG--TEWSWGYNGLGQLGNG---TITNSAVPVRVSGLTGLTDVVGVAAGRYAA 92
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
+ + A+++G N++GQ G G + + ++ L +++ G + L
Sbjct: 93 YAVRRDGTAWSWGYNAYGQLGNGRITNSTVPVR-----VSGLT--RVVALAGGAVNGYAL 145
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
+ G V++ G+ GQ G G + N P V G R+V ++ AV G V+
Sbjct: 146 RQDGTVWAWGYNNYGQLGNGTITNSRVPVRVLGL---SRVVAIAGGGTTAYAVRQDGTVW 202
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---G 257
WG+++ GQ+ S V + G+S ++ +A G L +G V++WG G
Sbjct: 203 AWGDNDEGQLGNGTTANSPFPV--RVTGLSAVIAIAGGQETGYALRRDGTVWAWGANDEG 260
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G VS S P I + L G S+ S A + G + WG N
Sbjct: 261 QLGNGTTVS-STVPVAIRN-LTGVTAIAASSEGNSGYA-------LRGDGTAWAWGLNNT 311
Query: 318 GQLGLGTVEDQPFPLKVA 335
GQLG GT + P++V+
Sbjct: 312 GQLGNGTDDTSLVPVQVS 329
>gi|366163660|ref|ZP_09463415.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
Length = 2438
Score = 88.2 bits (217), Expect = 5e-15, Method: Composition-based stats.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 48/323 (14%)
Query: 47 GNPLELVMSFVRIPLP-VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV 105
G +EL + P V +T + G T+ + ++ +GNN +GQ G G
Sbjct: 588 GKSIELARIYEEYEQPQVFDATTNPAQIEAGGKFTLALANDGSVKVWGNNDYGQLGLGNT 647
Query: 106 QEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ 165
E Y+ I DL K +DA G DH + L G V G GQ GLG L+ +
Sbjct: 648 LE--YKK---IATIPDLRYIKQLDA--GTDHAVALLNDGTVKVWGKNDYGQLGLGDLDKR 700
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQI-STPRVL 223
+P V G + G + ++++ D L + + G V GWG+++YGQ+ + S+++I TP L
Sbjct: 701 TSPTKVEG-LSG--VKQIAAGQDFTLVLMEDGTVKGWGSNDYGQLCKPSDVKIVKTPIDL 757
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFG 280
Q +S + ++A GG+ + + G V +WG YG LG G K+ RS + +
Sbjct: 758 PQ---LSDVKEIAVGGNCAFAILNNGTVKAWGDNDYGQLGLGDKLERSTPTQVTGLSSVK 814
Query: 281 QHQFNPKSKVESLIAG-------------PCTFGAITNF----------------GHLYM 311
+ + + L G P + G + N G +
Sbjct: 815 KISVCWSNAIALLNDGTVKVWGHINNYTLPTSVGELKNVKQVGVGVYNYFVLLQDGSVKG 874
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
WG N G LG+G E + P K+
Sbjct: 875 WGSNTLGSLGVGDTEQRTLPTKI 897
>gi|428170480|gb|EKX39405.1| hypothetical protein GUITHDRAFT_59944, partial [Guillardia theta
CCMP2712]
Length = 234
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 27/254 (10%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
G H++++ N +G+NS GQ G D G H + L I+ G
Sbjct: 3 AGGEHSLLLFSNGSVLAWGSNSDGQLGL-PPSCSDAAG----HLLQGLP--AIVSVAAGH 55
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H+L LT G VY+ G GQ G G L + P V ER+V++++ +A+
Sbjct: 56 RHSLALTADGSVYAWGANVPGQLGDGSLESTWRPTCVLSSRGSERVVRVAAGRAHSMALL 115
Query: 195 DKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
G V WG +GQ+ + E Q + PR ++ +GV R+ +A+GG L+++G V+
Sbjct: 116 SNGTVMAWGWDAFGQLGQEEPQGAALRPRAVALPQGV-RVCQIAAGGVHSLALDEKGQVW 174
Query: 253 SW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
W G G +G+G +VS S +P ++ + S+ AG A+ G L
Sbjct: 175 GWGGNGCGQVGEG-RVSYSSRPVVV------------LEEASSIAAGASHSLAVAR-GGL 220
Query: 310 YMWGKNQYGQLGLG 323
Y WG N G+LG G
Sbjct: 221 YGWGSNANGELGDG 234
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
+ G +H+L L +G V + G +DGQ GL + L++G IV +++
Sbjct: 2 IAGGEHSLLLFSNGSVLAWGSNSDGQLGLPPSCSDAAGHLLQGL---PAIVSVAAGHRHS 58
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LA++ G V+ WG + GQ+ + ++ + P + +G R+V VA+G + L G
Sbjct: 59 LALTADGSVYAWGANVPGQLGDGSLESTWRPTCVLSSRGSERVVRVAAGRAHSMALLSNG 118
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V +WG+ G LGQ +++P + +V + AG A+
Sbjct: 119 TVMAWGWDAFGQLGQEEPQGAALRPRAV--------ALPQGVRVCQIAAGGVHSLALDEK 170
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N GQ+G G V P+ V
Sbjct: 171 GQVWGWGGNGCGQVGEGRVSYSSRPVVV 198
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +A G+ ++ T ++ G N QLG P ++ S
Sbjct: 45 LPAIVSVAAGHRHSLALTADG----SVYAWGANVPGQLGDGSLESTWRPTCVLSS----- 95
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
S ++ +A GRAH++ + N +G ++FGQ G QEE +A
Sbjct: 96 ----RGSERVVRVAAGRAHSMALLSNGTVMAWGWDAFGQLG----QEEPQGAALRPRAVA 147
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGE 178
+G ++ G H+L L E G+V+ GWG + GQ G G ++ P +V E
Sbjct: 148 LPQGVRVCQIAAGGVHSLALDEKGQVW--GWGGNGCGQVGEGRVSYSSRPVVVL-----E 200
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
+++ LAV+ +G ++GWG++ G++ +
Sbjct: 201 EASSIAAGASHSLAVA-RGGLYGWGSNANGELGD 233
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 27/303 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIVIT 84
KLF G N LG+ K N +P VK S +I A G H + +
Sbjct: 58 KLFTWGWNQRGTLGHPAGTKSEN----------VPSQVKALSNVKIVQAAIGGWHCLAVD 107
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--GEKIM--DAVCGQDHTLFL 140
D A+ +G N +GQCG +++D G+ +IA + K++ G H++ L
Sbjct: 108 DQGRAYAWGGNEYGQCGE-EPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVL 166
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G V++ WG G + P V+G ++ R++ + + + LA+ + G ++
Sbjct: 167 TREGHVWT--WGQPWPPG--DITQISVPVRVQG-LDMVRLIAVGAFHN--LALQEDGTLW 219
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WGN+EYGQ+ + Q + + Q +VD+A+GG T L D G VY WG G G
Sbjct: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHG 279
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+ ++P + Q ++ + G A+T+ G ++ +G+ +G+L
Sbjct: 280 RLGFGDNDKSSKMVPQKV----QLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRL 335
Query: 321 GLG 323
G G
Sbjct: 336 GYG 338
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E + W C I LE + + V G ++L +TE GK+++
Sbjct: 8 IAWGSGEDGQLGLGNNEERE----WVC-AIKALESQNVCSVVAGSRNSLAITEDGKLFTW 62
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH ++ P V+ + +IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPAGTKSENVPSQVKA-LSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQI-SESEMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + +T R + +C + VA+GG+ +L EG V++WG
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P + +P + G V + G A+ G L+ WG N+YG
Sbjct: 178 ----PWPPGDITQISVPVRVQG------LDMVRLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 319 QLGLGTVE--DQPFPLK 333
QLG G + QP P++
Sbjct: 228 QLGTGDTQPRSQPIPVQ 244
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ + G G DGQ GLG+ +E C ++ +E + + + + LA+++ G +F WG +
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKA-LESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65
Query: 206 EYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ G + + V SQ K +S +IV A GG C ++D+G Y+WG YG G
Sbjct: 66 QRGTLGHP-AGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 261 QGP-KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
+ P K + +P + + PK V + AG +T GH++ WG+
Sbjct: 125 EEPEKKDNTGRPPRRDIAI--PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 177
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S + + G +++ IT++ FT+G N G G + + + L K
Sbjct: 37 SQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSEN----VPSQVKALSNVK 92
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER------- 179
I+ A G H L + + G+ Y+ G GQ G T R +I +
Sbjct: 93 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI 152
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNS-EYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+ ++++ + ++ +G V+ WG G I+ QIS P + +G+ + +A G
Sbjct: 153 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIT----QISVP---VRVQGLDMVRLIAVG 205
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
L ++G +++WG YG LG G RS P + G + + A
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ-----PIPVQGLSGLT----LVDIAA 256
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G A+T+ G +Y WG+ ++G+LG G
Sbjct: 257 GGWHSTALTDNGEVYGWGRGEHGRLGFG 284
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 30/305 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ CG ++ +LG D P IP ++ ++ + +G H + +T
Sbjct: 3004 KLYACGEGTNGRLGLGDDYNMCEP-------KLIPFLSQYVIKKVA-VHSGGKHALALTQ 3055
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F++G G+ G G D I L+ ++I D CG H+ + +G+
Sbjct: 3056 DGKVFSWGEGEDGKLGHGNCTTLDKP-----RLIESLKSKRIRDIACGSGHSAAIASNGE 3110
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWG 203
+Y+ G G G+ G G Q P LV+ + G+R+V+++ S ++++ G V+ WG
Sbjct: 3111 LYTWGLGEYGRLGHGDTATQMKPKLVQA-LSGQRVVQVACGSRDAQTMSLTADGCVYTWG 3169
Query: 204 NSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+ ++G++ TP ++ + G+ +V V G L G V++WG Y L
Sbjct: 3170 DGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3228
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G KPTL+ L G+ K+ + G A+T+ G +Y WG N +GQ
Sbjct: 3229 GHGND-HHVRKPTLVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279
Query: 320 LGLGT 324
G GT
Sbjct: 3280 QGNGT 3284
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T I + G+ H + +T + +++GN G+ G G D I L +
Sbjct: 508 PVTMIASHSDGK-HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKL-----IETLLEK 561
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS- 184
I+ CG ++ L+ SG++Y+ G G G+ G G ++ P LV ++G +V ++
Sbjct: 562 NIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLV-TTLKGHMVVHVAC 620
Query: 185 -SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
S L V+ G VF WG+ +YG++ S TP+++ + ++ +V V GG
Sbjct: 621 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDIN-VVRVFCGGQFS 679
Query: 243 TMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L G VY+WG G LG G + P LI S K++ L G
Sbjct: 680 AALTARGEVYTWGKGDAYRLGHGNE-EHVRYPKLIESL--------RDKKIKDLSVGGTH 730
Query: 300 FGAITNFGHLYMWGKNQYGQLG--LGTVEDQP 329
A+T +Y WG+N YGQ+ LG V +P
Sbjct: 731 ILALTEDQFVYGWGRNDYGQIDPTLGPVVSEP 762
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAV 187
+ G + TLF +T GKVYS G+GA G+ G+G ++ P L+ + +++ S
Sbjct: 3970 LAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGK 4029
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C LA+S +G V+ WG + G++ + + P+++ G+ IVD+A GG +
Sbjct: 4030 HC-LALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGI-EIVDIACGGHHSAAIT 4087
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G +Y+WG YG LG G PKV +++ + G +G
Sbjct: 4088 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG--------------SG 4133
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ +++ WG YG+LG G + PLK+
Sbjct: 4134 DAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4171
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
+ G TLF+ ++ GK+Y+CG G +G+ GLG N P L+ + ++K + S
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLI--PFLSQYVIKKVAVHSG 3046
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G VF WG E G++ + PR++ K RI D+A G +
Sbjct: 3047 GKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKS-KRIRDIACGSGHSAAI 3105
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTF 300
G +Y+WG YG LG G ++ MKP L+ L GQ +V + G
Sbjct: 3106 ASNGELYTWGLGEYGRLGHGDTATQ-MKPKLV-QALSGQ-------RVVQVACGSRDAQT 3156
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
++T G +Y WG +G+LG G
Sbjct: 3157 MSLTADGCVYTWGDGDFGKLGRG 3179
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D + DL G +I
Sbjct: 4019 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKL-----VEDLLGIEI 4073
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D CG H+ +T +G +Y+ G G G+ G G ++Q P +V ++ +++ ++ S
Sbjct: 4074 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGS 4132
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L V+D +V+ WG+ +YG++ P + G+ ++ V G
Sbjct: 4133 GDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VIKVECGSQFSVA 4191
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4192 LTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATGSLHCV 4242
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A ++ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4243 ACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKK 4282
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 32/214 (14%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + N +L+ GL +LG+ D + P +LV +
Sbjct: 3091 RIRDIACGSGHSAAIAS----NGELYTWGLGEYGRLGHGDTATQMKP-KLVQAL------ 3139
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
++ +A G A T+ +T + +T+G+ FG+ GRG G C+
Sbjct: 3140 ---SGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRG--------GSDGCYTPL 3188
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
+ L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3189 LVDRLNGLGVVQVECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-L 3245
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++IV ++ LAV+D G V+ WG++++GQ
Sbjct: 3246 RGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 14/227 (6%)
Query: 54 MSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+S+ R L +I +A G H+ IT +T+G +G+ G G D +
Sbjct: 4057 LSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG-----DSDDQ 4111
Query: 114 WFCHNIADLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ L+ K++D C G TL +T+ V+S G G G+ G G + + P +
Sbjct: 4112 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4171
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVS 230
+ G ++K+ +A++ G V+ WG +Y ++ ++ + PR ++ +G
Sbjct: 4172 -DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQG-K 4229
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+I+ +A+G C +D+G V++WG G LG G S +P L+
Sbjct: 4230 KIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG-TTSALQRPRLV 4275
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ G VYS G G G+ G G + + P L+ +E + I+ ++ A+S
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLE-KNIIFIACGSTYSAALSA 578
Query: 196 KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ S ++ P +++ KG +V VA SG S + G+V+
Sbjct: 579 SGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKG-HMVVHVACGSGDSQTLCVTASGIVF 637
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T G +
Sbjct: 638 SWGDGDYGKLGRGGS-DGSKTPKIVDKLL--------DINVVRVFCGGQFSAALTARGEV 688
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
Y WGK +LG G E +P
Sbjct: 689 YTWGKGDAYRLGHGNEEHVRYP 710
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ H+A +G + T+ +T + F++G+ +G+ GRG G + L +
Sbjct: 615 VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG-----GSDGSKTPKIVDKLLDINV 669
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSS 185
+ CG + LT G+VY+ WG LGH N + P L+ + ++I LS
Sbjct: 670 VRVFCGGQFSAALTARGEVYT--WGKGDAYRLGHGNEEHVRYPKLIES-LRDKKIKDLSV 726
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+LA+++ V+GWG ++YGQI + + + L ++ +ASG
Sbjct: 727 GGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASG 779
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ G ++GWG++ GQ+ E +I P + C+ +S R + +A G
Sbjct: 3923 DWTLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLP---APCESLSALRPIQLAGGEQTLFA 3979
Query: 245 LNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ +G VYS GYG LG G S M PTL+ S QH F K V S G
Sbjct: 3980 VTADGKVYSTGYGAAGRLGIGGTDS-VMVPTLLESI---QHVFIKKVAVNS---GGKHCL 4032
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
A+++ GH+Y WG+ G+LG G
Sbjct: 4033 ALSSEGHVYSWGEGDDGKLGHG 4054
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 237 SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
S G L +G VYSWG G LG G +S +P LI + L + + +
Sbjct: 516 SDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHD-EPKLIETLL--------EKNIIFI 566
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A++ G LY WG+ YG+LG G+ +D P V
Sbjct: 567 ACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLV 607
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D ++PL
Sbjct: 4124 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKVPLK 4170
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4171 IDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4225
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + ++ G+V++ G +GQ G G + + P LV ++G++I
Sbjct: 4226 LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA-LQGKKIT 4284
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4285 RVACGSAHTLAWS 4297
>gi|444911273|ref|ZP_21231448.1| hypothetical protein D187_02792 [Cystobacter fuscus DSM 2262]
gi|444718031|gb|ELW58847.1| hypothetical protein D187_02792 [Cystobacter fuscus DSM 2262]
Length = 476
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 36/336 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLK---LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ ++ +G ++ A S L+ LF G N QLG D +PL P
Sbjct: 115 VAEVRFRWGTSLAAGLSHSAALRDGQLFTWGGNDAGQLGRPDAGNTPHPL---------P 165
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+P P ++ + G + T+V+ + GA+ ++G RG+V
Sbjct: 166 VPGLAP---VRAVVAGPSSTLVLLEEGGAW-----AWGTLPRGLVPARKEP-----STPT 212
Query: 121 DLEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+E ++D G H L L G V + G GQ GLG E P V G +
Sbjct: 213 RVESPGPVVDVALGASHALLLLADGTVLAVGSNTKGQLGLGSTAPVEAPTRVPGLSD--- 269
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
IV+++ +A+ G VF WG++ GQ+ E+ + + + ++VD+A+G
Sbjct: 270 IVRVAVGTAHSVALRRDGTVFTWGDNGDGQLGNGELDATPHPEPLEVAHLGQVVDIATGR 329
Query: 240 SACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L +G V +WG G+ GQ G S + P + S + ++
Sbjct: 330 GHVLALGADGRVRAWGLGMSGQLGHGKSGMLGSRAQPVDVLDVTDAVAVSALNNV----- 384
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
F A++ G L+ WG+N QLG G++ ++P P++V
Sbjct: 385 GF-ALSASGTLWAWGQNSNAQLGDGSLAERPRPIQV 419
>gi|375013355|ref|YP_004990343.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Owenweeksia hongkongensis DSM 17368]
gi|359349279|gb|AEV33698.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Owenweeksia hongkongensis DSM 17368]
Length = 460
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 30/272 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G HT+ + + +G+NS+GQ + + Y + H +A +KI+
Sbjct: 69 ITDVAAGAEHTLALDTGGNVWAWGDNSYGQ-----LCDSSYVNRIMPHRVAG--ADKILS 121
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV---RGEIEGERIVKLSSA 186
G +L+L E V++ G +GQ G Q P V R ++ +S+
Sbjct: 122 ISAGWRFSLYLREDSTVWAGGENTNGQVG-----TQSPPYSVNYLRQISNLSDVIAISAG 176
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ L + G V+ WG + YGQ+ + S V Q +G++ IV + +G S +
Sbjct: 177 FNHCLVLEADGSVWSWGFNSYGQLGDGTTNTSIIPV--QVQGLNSIVAIEAGWSVSYAIK 234
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-A 302
++G ++SWG +G LG G +L+ S + Q S+I F A
Sbjct: 235 NDGTLWSWGANYHGQLGTG---------SLMGSGVTSSPQLVVGLDSVSMIRSDVDFTLA 285
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G L+ WGKN +GQLG T D+ P KV
Sbjct: 286 LKEKGSLWAWGKNFHGQLGDSTKADRNIPTKV 317
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 44/285 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI I+ G+ F++ + ++ G N++ Q+G P N L + +
Sbjct: 118 KILSISAGWRFSLYLREDS----TVWAGGENTNGQVGTQSPPYSVNYLRQISNL------ 167
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE----DYQGKWFCHN 118
+ + ++ G H +V+ + +++G NS+GQ G G QG ++
Sbjct: 168 -----SDVIAISAGFNHCLVLEADGSVWSWGFNSYGQLGDGTTNTSIIPVQVQG---LNS 219
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQ---ETPCLVRG 173
I +E + D TL+ WGA+ GQ G G L +P LV G
Sbjct: 220 IVAIEAGWSVSYAIKNDGTLW----------SWGANYHGQLGTGSLMGSGVTSSPQLVVG 269
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
+ + + S VD LA+ +KG ++ WG + +GQ+ +S + + ++ K + +V
Sbjct: 270 L---DSVSMIRSDVDFTLALKEKGSLWAWGKNFHGQLGDSTK--ADRNIPTKVKNLGSVV 324
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTL 278
DV G + +N G +YSWG G +G S ++ L PS++
Sbjct: 325 DVGVGSAVGYAINSVGEIYSWGAGP--EGALASDTITQKLTPSSI 367
>gi|209155120|gb|ACI33792.1| RCC2 homolog [Salmo salar]
Length = 569
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 36/261 (13%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + +AD E ++ A CG++HT
Sbjct: 207 AHSLLITTEGKLWSWGRNEKGQLGHGDTKR--LEAPKLIEPLAD---EVVVAAACGRNHT 261
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
L LTE G YS G GQ G G+ + +P L+ + G+ +VK++ + + V K
Sbjct: 262 LALTEGGTAYSFGENKLGQLGQGNQTDAVLSPALI--QYNGQPLVKVACGAEFSMVVDCK 319
Query: 197 GDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV-------------------- 233
G+++ +G EYGQ+ S+ + R+ C+ ++R V
Sbjct: 320 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVV 379
Query: 234 -DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
DVA GG+ +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 380 RDVACGGNHTLILDSQKRVFSWGFG--GYGRLGHTEQKDEMVPR-LVKLFDFPGRGASQI 436
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
C+F A+ G L+ WG
Sbjct: 437 YTGYQCSF-AVNEMGGLFFWG 456
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ACG T+ T+ + G N QLG +GN + V+S P +
Sbjct: 251 VVAAACGRNHTLALTEGGTA----YSFGENKLGQLG------QGNQTDAVLS----PALI 296
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIA 120
++ + +A G ++V+ ++FG +GQ G G + ++ C IA
Sbjct: 297 QYNGQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIA 356
Query: 121 D-----LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
+E K + D CG +HTL L +V+S G+G G+ G +
Sbjct: 357 RRVAIFIEKSKDGQVTPVPNVVVRDVACGGNHTLILDSQKRVFSWGFGGYGRLGHTEQKD 416
Query: 165 QETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ P LV+ + G ++ + C AV++ G +F WG + + ES M P+ +
Sbjct: 417 EMVPRLVKLFDFPGRGASQIYTGYQCSFAVNEMGGLFFWGVTNTSR--ESTMY---PKAV 471
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRS 268
G ++ +A G S+ + D+ + SWG +G LG G ++S
Sbjct: 472 QDLCGW-KVRSLACGKSSIVIAADDSTI-SWGPSPTFGELGYGDNKAKS 518
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
L ++ +G ++ WG +E GQ+ + ++ P+++ +V A G + L + G
Sbjct: 210 LLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEPLAD-EVVVAAACGRNHTLALTEGG 268
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
YS+G G LGQG + + P LI Q+N + V+ +A F + +
Sbjct: 269 TAYSFGENKLGQLGQGNQTDAVLSPALI--------QYNGQPLVK--VACGAEFSMVVDC 318
Query: 307 -GHLYMWGKNQYGQLG 321
G+LY +G +YGQLG
Sbjct: 319 KGNLYSFGCPEYGQLG 334
>gi|443686928|gb|ELT90046.1| hypothetical protein CAPTEDRAFT_159495 [Capitella teleta]
Length = 446
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 129/289 (44%), Gaps = 42/289 (14%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +A G HT +T + FTFG N G GR +EED F ++ DL+ KI+
Sbjct: 97 EIVQIAAGGMHTACLTKDGKVFTFGCNDEGALGRSTPEEEDC----FEPSVVDLKA-KIV 151
Query: 129 DAVCGQDHTLFLTESGKVYSCGWG----ADGQTGLGHLNNQE-TPCLVRGEIEGERIVKL 183
G HT L + G++Y GWG A+G GL + TP ++ + G+R++K+
Sbjct: 152 QISAGDSHTAALADDGELY--GWGTFRDANGSIGLQTPKTRSPTPIVL---LSGQRVIKV 206
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS------------TPRVLSQCK-GVS 230
+S D +L +++ G +F GN++ GQ+ S TP + CK +
Sbjct: 207 ASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRGGRKGLSLLLTPAAV-HCKLRKA 265
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ DV +GG D G +YSWG Y +G V+R +P F
Sbjct: 266 KFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFDDMVNR-----YVPDRC---KSFKTD 317
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG--TVEDQPFPLKV 334
+ + G A+ G +Y G+ YG LGLG E++ P V
Sbjct: 318 LDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEKSEPTAV 366
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 27/271 (9%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L + R+H V+ T G GQ G G ED + + ++GE I+
Sbjct: 53 LVSHRSHGHVVGQT---LTIGTGDTGQLGLG----EDIMDRAR-PALVKIDGE-IVQIAA 103
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAVDCVL 191
G HT LT+ GKV++ +G + + LG +E C ++ +IV++S+
Sbjct: 104 GGMHTACLTKDGKVFT--FGCNDEGALGRSTPEEEDCFEPSVVDLKAKIVQISAGDSHTA 161
Query: 192 AVSDKGDVFGWG--NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
A++D G+++GWG G I + +P + G R++ VASG L + G
Sbjct: 162 ALADDGELYGWGTFRDANGSIGLQTPKTRSPTPIVLLSG-QRVIKVASGDDHILCLTENG 220
Query: 250 LVYSWGYGLLGQGPKVS---------RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
++S G GQ +V+ + + L P+ + H K+K + G T
Sbjct: 221 QIFSMGNADQGQLGRVAECFSTRGGRKGLSLLLTPAAV---HCKLRKAKFTDVWTGGWTS 277
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A T+ G +Y WG N Y Q+G + ++ P
Sbjct: 278 FAKTDTGDIYSWGLNNYFQIGFDDMVNRYVP 308
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K TD+ G + T + D ++ GLN+ Q+G+ D +V +V P
Sbjct: 266 KFTDVWTGGWTSFAKTDTGD----IYSWGLNNYFQIGFDD---------MVNRYV--PDR 310
Query: 63 VKHPSTQI--KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI-VQEEDYQGKWFCHNI 119
K T + K ++ G+ HTI + N +T G +G G G V EE + +
Sbjct: 311 CKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEKSEPT----AV 366
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
L+ K CG +L + E+G VY+ G G + Q G ++ P +
Sbjct: 367 TSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQQLGQAEDDDLYEPTQI 418
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 54 MSFVRIPLPV--KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ 111
+S + P V K + + TG + TD +++G N++ Q G +D
Sbjct: 249 LSLLLTPAAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGF-----DDMV 303
Query: 112 GKWF---CHNI-ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQE 166
++ C + DL+ + I GQ HT+ L +G+VY+ G G GLG ++ ++
Sbjct: 304 NRYVPDRCKSFKTDLDWKDISG---GQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEK 360
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG---NSEYGQISESEMQISTPRVL 223
+ ++ + ++ LAV++ G V+ WG N + GQ + ++ T +
Sbjct: 361 SEPTAVTSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQQLGQAEDDDLYEPTQIIS 420
Query: 224 SQCKGVSRIVDVASGGSACTML 245
Q + I+ V++GG +L
Sbjct: 421 KQMETRDGIM-VSAGGQHTVIL 441
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 27/303 (8%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIVIT 84
KLF G N LG+ K N +P VK S +I A G H + +
Sbjct: 58 KLFTWGWNQRGTLGHPAGTKSEN----------VPSQVKALSNVKIVQAAIGGWHCLAVD 107
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--GEKIM--DAVCGQDHTLFL 140
D A+ +G N +GQCG +++D G+ +IA + K++ G H++ L
Sbjct: 108 DQGRAYAWGGNEYGQCGE-EPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVL 166
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T G V++ WG G + P V+G ++ R++ + + + LA+ + G ++
Sbjct: 167 TREGHVWT--WGQPWPPG--DITQISVPVRVQG-LDMVRLIAVGAFHN--LALQEDGTLW 219
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WGN+EYGQ+ + Q + + Q +VD+A+GG T L D G VY WG G G
Sbjct: 220 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHG 279
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+ ++P + Q ++ + G A+T+ G ++ +G+ +G+L
Sbjct: 280 RLGFGDNDKSSKMVPQKV----QLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRL 335
Query: 321 GLG 323
G G
Sbjct: 336 GYG 338
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E + W C I LE + + V G ++L +TE GK+++
Sbjct: 8 IAWGSGEDGQLGLGNNEERE----WVC-AIKALESQNVCSVVAGSRNSLAITEDGKLFTW 62
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH ++ P V+ + +IV+ + LAV D+G + WG +E
Sbjct: 63 GWNQRGT--LGHPAGTKSENVPSQVKA-LSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 207 YGQISES-EMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + +T R + +C + VA+GG+ +L EG V++WG
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P + +P + G V + G A+ G L+ WG N+YG
Sbjct: 178 ----PWPPGDITQISVPVRVQG------LDMVRLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 319 QLGLGTVE--DQPFPLK 333
QLG G + QP P++
Sbjct: 228 QLGTGDTQPRSQPIPVQ 244
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ + G G DGQ GLG+ +E C ++ +E + + + + LA+++ G +F WG +
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKA-LESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65
Query: 206 EYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ G + + V SQ K +S +IV A GG C ++D+G Y+WG YG G
Sbjct: 66 QRGTLGHP-AGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 261 QGP-KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
+ P K + +P + + PK V + AG +T GH++ WG+
Sbjct: 125 EEPEKKDNTGRPPRRDIAI--PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 177
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S + + G +++ IT++ FT+G N G G + + + L K
Sbjct: 37 SQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSEN----VPSQVKALSNVK 92
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER------- 179
I+ A G H L + + G+ Y+ G GQ G T R +I +
Sbjct: 93 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI 152
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNS-EYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+ ++++ + ++ +G V+ WG G I+ QIS P + +G+ + +A G
Sbjct: 153 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIT----QISVP---VRVQGLDMVRLIAVG 205
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
L ++G +++WG YG LG G RS P + G + + A
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ-----PIPVQGLSGLT----LVDIAA 256
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G A+T+ G +Y WG+ ++G+LG G
Sbjct: 257 GGWHSTALTDNGEVYGWGRGEHGRLGFG 284
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 27/263 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ A+G H++++ N + G+NS GQ GR VQ +++ + I L+ ++
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKR-----IRTLDNLRVD 78
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG++H+L + G+V++ G G++GQ G+G + G +I+++S
Sbjct: 79 LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHY 138
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA+S+ G VF WG++ +GQ+ E Q S RV S G+ + VA+GG+ L
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRS-LDGIP-LTQVAAGGAHSFAL 196
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS----KVESLIAGPCTF- 300
+ G + WG GQ +++ +P P+S K +I C +
Sbjct: 197 SLSGASFGWGSNNAGQ-----LALRQNNVPV-----QSHKPRSIGALKNLGVIYISCGYE 246
Query: 301 --GAITNFGHLYMWGKNQYGQLG 321
+T G ++ +G N YGQLG
Sbjct: 247 HTAVLTQTGKVFTFGGNSYGQLG 269
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLEL-VMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
N +L CG NS QLG ++ +P + + +R+ L ++ G+ H++
Sbjct: 41 NGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDL-----------VSCGKEHSLA 89
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ F +G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 90 VCYKGRVFAWGAGSEGQLGVGEFKEINL----IPTKIKTLTGIKIIQVSCGHYHSLALSE 145
Query: 143 SGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G + GQ GLG +Q +P VR ++G + ++++ A+S G FG
Sbjct: 146 GGQVFSWGSNSHGQLGLGKECPSQASPQRVRS-LDGIPLTQVAAGGAHSFALSLSGASFG 204
Query: 202 WGNSEYGQISESE----MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
WG++ GQ++ + +Q PR + K + ++ ++ G +L G V+++G
Sbjct: 205 WGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG-VIYISCGYEHTAVLTQTGKVFTFGGN 263
Query: 256 -YGLLGQGPKVSR 267
YG LG P +
Sbjct: 264 SYGQLGHSPTAEK 276
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L +G+++SCG + GQ G + E P +R ++ R+ +
Sbjct: 22 GAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRT-LDNLRVDLV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG GQ+ E + P + G+ +I+ V+ G
Sbjct: 81 SCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGI-KIIQVSCGHYH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L++ G V+SWG +G LG G + P + S L G P ++V AG
Sbjct: 140 SLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRS-LDGI----PLTQVA---AGGA 191
Query: 299 TFGAITNFGHLYMWGKNQYGQLGL 322
A++ G + WG N GQL L
Sbjct: 192 HSFALSLSGASFGWGSNNAGQLAL 215
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ ++ ++F G NS QLG + V S IPL
Sbjct: 128 IKIIQVSCGHYHSLALSEGG----QVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPL 183
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQEEDYQGKWFCHNI 119
TQ+ A G AH+ ++ + +F +G+N+ GQ + V + ++ + +I
Sbjct: 184 ------TQV---AAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPR----SI 230
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L+ ++ CG +HT LT++GKV++ G + GQ G +E P LV G I+G
Sbjct: 231 GALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG-IDG-- 287
Query: 180 IVKLSSAVDC 189
L S +DC
Sbjct: 288 ---LVSQIDC 294
>gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 38/272 (13%)
Query: 69 QIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
Q+ + +G AH+++IT +++G N GQ G G + + +AD E
Sbjct: 123 QVSSVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKR--LEAPKLIEALAD---EV 177
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSS 185
++ A CG++HTL LTE G YS G GQ G G+ + +P L+ + G+ +VK++
Sbjct: 178 VVAAACGRNHTLALTEGGTAYSFGENKLGQLGQGNQTDAVLSPALI--QYNGQPLVKVAC 235
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------- 233
+ + V KG+++ +G EYGQ+ S+ + R+ C+ ++R V
Sbjct: 236 GAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVTIFIEKSKD 295
Query: 234 ------------DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
DVA GG+ +L+ + V+SWG+G G G K ++P L
Sbjct: 296 GQVTPVPNVVVRDVACGGNHTLILDSQKRVFSWGFG--GYGRLGHTEQKDEMVPR-LVKL 352
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A+ G L+ WG
Sbjct: 353 FDFPGRGASQIYTGYQCSF-AVNEMGGLFFWG 383
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ACG T+ T+ + G N QLG +GN + V+S P +
Sbjct: 178 VVAAACGRNHTLALTEGG----TAYSFGENKLGQLG------QGNQTDAVLS----PALI 223
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIA 120
++ + +A G ++V+ ++FG +GQ G G + ++ C IA
Sbjct: 224 QYNGQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIA 283
Query: 121 D-----LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
+E K + D CG +HTL L +V+S G+G G+ G +
Sbjct: 284 RRVTIFIEKSKDGQVTPVPNVVVRDVACGGNHTLILDSQKRVFSWGFGGYGRLGHTEQKD 343
Query: 165 QETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ P LV+ + G ++ + C AV++ G +F WG + + ES M P+ +
Sbjct: 344 EMVPRLVKLFDFPGRGASQIYTGYQCSFAVNEMGGLFFWGVTNTSR--ESTM---YPKAV 398
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRS 268
G ++ +A G S+ + D+ + SWG +G LG G ++S
Sbjct: 399 QDLCGW-KVRSLACGKSSIVIAADDSTI-SWGPSPTFGELGYGDNKAKS 445
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG +E GQ+ + + L + +V A G + L + G
Sbjct: 137 LLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGT 196
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF- 306
YS+G G LGQG + + P LI Q+N + V+ +A F + +
Sbjct: 197 AYSFGENKLGQLGQGNQTDAVLSPALI--------QYNGQPLVK--VACGAEFSMVVDCK 246
Query: 307 GHLYMWGKNQYGQLG 321
G+LY +G +YGQLG
Sbjct: 247 GNLYSFGCPEYGQLG 261
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 278 LFGQHQFN--PKSKVESLIAGPCTFGA--ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
L+G H++ +V S+++GPC + IT G L+ WG+N+ GQLG G + P
Sbjct: 110 LWGPHRYGCLNDVQVSSVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAP 167
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 45/314 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 2716 KVYACGEATNGRLG------------LGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHA 2763
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 2764 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 2815
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 2816 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 2874
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 2875 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2933
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 2934 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDAGQVYA 2984
Query: 312 WGKNQYGQLGLGTV 325
WG N +GQ G GT
Sbjct: 2985 WGDNDHGQQGNGTT 2998
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G L +T++G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWG 255
C L ++ V+SWG
Sbjct: 721 HCLALTEDSEVHSWG 735
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 2804 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 2853
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 2854 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNVPQNIERL 2906
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2907 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 2965
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 2966 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3023
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 113/251 (45%), Gaps = 46/251 (18%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P +V + G +V +++
Sbjct: 3726 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES-LRGTEVVDIAAGGAHSAC 3784
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 3785 VTSAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 3842
Query: 249 GLVYSWG---YGLLGQG-----------PKVSRSMKPTLIPSTL---------------- 278
V+SWG YG LG+G P R +P+ P +
Sbjct: 3843 DTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGH 3902
Query: 279 -FGQHQFNPK-------SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
H P+ KV ++ G T G +Y WG N GQLG GT
Sbjct: 3903 GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQR 3962
Query: 331 P-LKVAVGGQK 340
P L A+ G+K
Sbjct: 3963 PRLVAALQGRK 3973
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2701 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-MSSGTVPIPRQVTALSSYVVKKVAVHSG 2759
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 2760 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 2818
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 2819 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 2870
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2871 -ALTDEGLVFSWGDGDFGKLGRGGSE 2895
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 34/222 (15%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA SG + + D G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQPLAVTDNG 625
Query: 250 LVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSV------------- 671
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
A+T G +Y WGK +LG GT E +P L A+ G+K
Sbjct: 672 --ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKK 711
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3622 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3676
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +S P +L + V R V V SGG C L+ E
Sbjct: 3677 FAVTADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE 3736
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P ++ S L G ++V + AG +T+
Sbjct: 3737 GEVYSWGEAEDGKLGHGNR-SPCDRPRVVES-LRG-------TEVVDIAAGGAHSACVTS 3787
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 3788 AGDLYTWGKGRYGRLGHSDSEDQLKP 3813
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 20/253 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3634 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 3687
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G+GA G+ G+G + P L+ + R V ++S LA+S +G+V+ WG +E
Sbjct: 3688 TGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3747
Query: 208 GQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
G++ + PRV+ +G + +VD+A+GG+ + G +Y+WG YG LG
Sbjct: 3748 GKLGHGNRSPCDRPRVVESLRG-TEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD 3806
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ +KP L+ L G + +G +T+ ++ WG YG+LG G
Sbjct: 3807 SEDQ-LKPKLV-EALQGHRVVDVACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3859
Query: 324 TVEDQPFPLKVAV 336
+ P+KV +
Sbjct: 3860 GSDGCKVPMKVPL 3872
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ C + L L+ +G+VY+ + +D P LV+G + IVK+++
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQG-LASRNIVKIAAH 502
Query: 187 VD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV---SRIVDVASGGS 240
D LA++ G+V+ WG + G++ + + + P+V+S G +V +A G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ EG +Y+WG YG LG G S + IP + G +I
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGLK-------VIDVA 610
Query: 298 CTFG-----AITNFGHLYMWGKNQYGQLGLG 323
C G A+T+ G ++ WG YG+LG G
Sbjct: 611 CGSGDAQPLAVTDNGQVWSWGDGDYGKLGRG 641
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T++ +A G AH+ +T +T+G +G+ G D + + + L+G ++
Sbjct: 3770 TEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLG-----HSDSEDQLKPKLVEALQGHRV 3824
Query: 128 MDAVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+D CG TL LT+ V+S G G G+ G G + + P V + R+ + S+
Sbjct: 3825 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSL---RVGRPST 3881
Query: 186 AVDC--VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
L V KGD G+ S+ + PR + +G +++ +A+G C
Sbjct: 3882 PPPSWPRLDVGGKGDYHRLGHG-------SDDHVRRPRQVQGLQG-KKVIAIATGSLHCV 3933
Query: 244 MLNDEGLVYSWG---YGLLGQG 262
+EG VY+WG G LG G
Sbjct: 3934 CCTEEGEVYTWGDNDEGQLGDG 3955
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 52/231 (22%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ DIA G + T + D L+ G +LG+ D + P +LV +
Sbjct: 3771 EVVDIAAGGAHSACVTSAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ----- 3820
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG------------------- 103
H + +G A T+ +TD++ +++G+ +G+ GRG
Sbjct: 3821 -GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGR 3878
Query: 104 ------IVQEEDYQGKWFCHNIAD--------------LEGEKIMDAVCGQDHTLFLTES 143
D GK H + L+G+K++ G H + TE
Sbjct: 3879 PSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEE 3938
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
G+VY+ G +GQ G G N + P LV ++G ++ +++ LA S
Sbjct: 3939 GEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGRKVNRVACGSAHTLAWS 3988
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 2962 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3016
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3017 RVACGSSHSVAWT 3029
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +ATG H + T+ +T+G+N GQ G G +A L+G K+
Sbjct: 3921 KVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRP-----RLVAALQGRKVN 3975
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
CG HTL + S + A HL QE P +
Sbjct: 3976 RVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL--QELPVVA 4016
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 87.8 bits (216), Expect = 6e-15, Method: Composition-based stats.
Identities = 90/359 (25%), Positives = 150/359 (41%), Gaps = 42/359 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+ + +T V + + + K + G N+ QLG + P + VR P
Sbjct: 556 IRFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDATTNSRSTP-----NIVRKPT 610
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V T ++ ++ G+ H++ + + + +G+N GQ G + + A+
Sbjct: 611 GVPTDFTYVQ-VSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVR--VRDPAN 667
Query: 122 L----EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-- 175
+G K + G +H+L L +G VY+ GW +G+ G + P VR
Sbjct: 668 PTDPNKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASP 727
Query: 176 ----EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ------ 225
+G + V++S+ LAV G + WG + YGQ+ S S+ V +
Sbjct: 728 TDPSKGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPN 787
Query: 226 --CKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFG 280
KG+ + V V++G S + +G Y+WG YG LG V ++ + T
Sbjct: 788 DANKGL-KAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPT--- 843
Query: 281 QHQFNPKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+PK + L A G A+ N G+ Y WG N Y QLG GT + P+ V
Sbjct: 844 ----SPKDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPV 898
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 84/335 (25%), Positives = 136/335 (40%), Gaps = 41/335 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIK--HLATGRAHTIVIT 84
++ G N QLG + P+ VR P P+ +K ++ G H++ +
Sbjct: 637 VYAWGSNQHGQLGNNTKTNSSVPVR-----VRDPANPTDPNKGLKAIQVSAGDEHSLALD 691
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDY--QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
N + +G N G+ G + + + +G K + G H+L +
Sbjct: 692 SNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVGS 751
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRG------EIEGERIVKLSSAVDCVLAVSDK 196
G Y+ G GQ G N+ P VR +G + V++S+ LAV
Sbjct: 752 DGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSD 811
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQ--------CKGVSRIVDVASGGSACTMLNDE 248
G + WG + YGQ+ S ST V + KG+ + + +GG + +
Sbjct: 812 GYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGL-KATAINAGGEHSLAVGNN 870
Query: 249 GLVYSWGYGL---LGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFG--- 301
G Y+WG+ L LG G + S+ P P++ P + L A + G
Sbjct: 871 GYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTS--------PADASKGLQATRFSVGDHH 922
Query: 302 --AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G+ Y WG+N YGQLG GT +D P+ V
Sbjct: 923 SLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 42/328 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L ++IP + S + K +A +G H +
Sbjct: 2974 KIYACGEATNGRLG----------LGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMA 3023
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3024 LTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3075
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
+T SG++YS G G G+ G G Q P LV+ + G R+++++ S LA++D+G
Sbjct: 3076 ITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEG 3134
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
VF WG+ ++G++ + + P+ + + G + + G L G+V++WG
Sbjct: 3135 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGK 3193
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G V KP ++ L G+ K+ + G A+T+ G +Y WG
Sbjct: 3194 GDYFRLGHGTDV-HVRKPQIV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYAWG 3244
Query: 314 KNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
N +GQ G GT P V + GQK
Sbjct: 3245 DNDHGQQGNGTTTVNRKPTLVQGLEGQK 3272
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 103/195 (52%), Gaps = 10/195 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K Q+ +A G ++ +T + +T+G ++G+ G G ED + L+
Sbjct: 498 KQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHG--SSEDVTTPML---VTALK 552
Query: 124 GEKIMDAVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G+K++D CG TL +TE+G+V+S G G G+ G G + +TP LV +++ IV
Sbjct: 553 GQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE-KLQDLDIV 611
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ ++ + P++L +G ++VD+A G +
Sbjct: 612 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQG-KKVVDIAVGST 670
Query: 241 ACTMLNDEGLVYSWG 255
C L DEG V+SWG
Sbjct: 671 HCLALTDEGEVHSWG 685
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3062 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NTTQLRPKLVKVLL- 3111
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3112 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3164
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3165 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEG-LRGKKIVH 3223
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3224 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3281
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 35/231 (15%)
Query: 119 IADLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV---RG 173
I L KI+ D H L L+ SG+VYS G G G+ G G E P L+ G
Sbjct: 438 IHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSG 497
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRI 232
+ G+++V+++ AV+ G+++ WG YG++ S ++TP +++ KG ++
Sbjct: 498 KQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKG-QKV 556
Query: 233 VDVASG-GSACTM-LNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFG 280
VDVA G G A T+ + + G V+SWG YG LG+G PK+ ++ I G
Sbjct: 557 VDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCG 616
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
QF+ A+T G +Y WGK +LG GT E +P
Sbjct: 617 S-QFSV---------------ALTKDGQVYTWGKGDNQRLGHGTDEHVRYP 651
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3982 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGVEV 4036
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T SG++++ G G G+ G G +Q P LV ++G R++ ++ S
Sbjct: 4037 VDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA-LQGHRVIDVACGS 4095
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4096 GDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4154
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4155 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4205
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4206 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4245
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER-IVKLSSAV- 187
V G +LF +T GK+Y+CG +G+ GLG L G I+ R I LS+ V
Sbjct: 2959 VAGGSKSLFAVTVEGKIYACGEATNGRLGLG---------LSSGTIQIPRQISALSNYVV 3009
Query: 188 ---------DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+A++ G VF WG + G++ S M PR++ K RI D+A
Sbjct: 3010 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3068
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVES 292
G S + G +YSWG YG LG G ++ ++P L+ L G Q S+
Sbjct: 3069 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLV-KVLLGHRVIQVACGSRDAQ 3126
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ A+T+ G ++ WG +G+LG G E
Sbjct: 3127 TL-------ALTDEGLVFSWGDGDFGKLGRGGSE 3153
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G++++ CG ++ +T G++Y+ G G G+ G G + TP LV ++G+++V +
Sbjct: 501 GKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTA-LKGQKVVDV 559
Query: 184 S--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGS 240
+ S LAV++ G V+ WG+ +YG++ TP+++ + + + IV V G
Sbjct: 560 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLD-IVKVCCGSQ 618
Query: 241 ACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G VY+WG G LG G P L+ S L G+ KV + G
Sbjct: 619 FSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDS-LQGK-------KVVDIAVGS 669
Query: 298 CTFGAITNFGHLYMWGKNQYGQ 319
A+T+ G ++ WG N Q
Sbjct: 670 THCLALTDEGEVHSWGSNDKLQ 691
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAV 187
+ G + TLF +T GK+Y+ G+GA G+ G+G + TP L+ + +++ S
Sbjct: 3933 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 3992
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C LA+S +G+V+ WG +E G++ + PRV+ +GV +VD+A+GG+ +
Sbjct: 3993 HC-LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGV-EVVDIAAGGAHSACIT 4050
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G +++WG YG LG G + +KP L+ L G + +G +
Sbjct: 4051 ASGELFTWGKGRYGRLGHGDSEDQ-LKPKLV-DALQGHRVIDVACG-----SGDAQTLCL 4103
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ ++ WG YG+LG G + P+K+
Sbjct: 4104 TDDDMVWSWGDGDYGKLGRGGSDGCKVPMKI 4134
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ DIA G + T S + LF G +LG+ D + P +LV +
Sbjct: 4034 VEVVDIAAGGAHSACITASGE----LFTWGKGRYGRLGHGDSEDQLKP-KLVDALQ---- 4084
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4085 --GHRVIDVA-CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4136
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4137 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4195
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + ++ + G
Sbjct: 4196 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKINRVACG 4252
Query: 240 SACTM 244
SA T+
Sbjct: 4253 SAHTL 4257
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R V+L + AV
Sbjct: 3886 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV 3943
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLV 251
+ G ++ G G++ + +STP +L + V + V V SGG C L+ EG V
Sbjct: 3944 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4003
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P +I S L G +V + AG IT G
Sbjct: 4004 YSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------VEVVDIAAGGAHSACITASGE 4054
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
L+ WGK +YG+LG G EDQ P
Sbjct: 4055 LFTWGKGRYGRLGHGDSEDQLKP 4077
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +T+N +++G+ +G+ GRG + + + DL+ I+ CG
Sbjct: 563 SGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLD---IVKVCCGS 617
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
++ LT+ G+VY+ G G + + G G + P L+ ++G+++V ++ LA++
Sbjct: 618 QFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL-DSLQGKKVVDIAVGSTHCLALT 676
Query: 195 DKGDVFGWGNSEYGQ 209
D+G+V WG+++ Q
Sbjct: 677 DEGEVHSWGSNDKLQ 691
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 231 RIVDVAS--GGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+IV +A+ G L+ G VYSWG G LG G + +P LI T F Q
Sbjct: 445 KIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHG-DATYLEEPALI--TTFSGKQTG 501
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+V + G A+T G LY WG+ YG+LG G+ ED P+ V A+ GQK
Sbjct: 502 --KQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQK 555
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4148 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4202
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G++I +++ LA S
Sbjct: 4203 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKINRVACGSAHTLAWS 4260
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3220 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3274
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3275 RVACGSSHSVAWT 3287
>gi|300706758|ref|XP_002995620.1| hypothetical protein NCER_101430 [Nosema ceranae BRL01]
gi|239604795|gb|EEQ81949.1| hypothetical protein NCER_101430 [Nosema ceranae BRL01]
Length = 362
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 19/256 (7%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+ FG+N+ Q G G EDY I + KI CG HTL LTE K++S
Sbjct: 3 VYVFGSNAISQFGLG----EDYTSTHIPQQIPFFDNIKIKKVKCGTIHTLVLTEDNKLFS 58
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG----- 203
WG + + LG ++ P V I E+ + ++ +++K +VF WG
Sbjct: 59 --WGCNDEYALGRSGDEFYPQEV---ILPEKPIDIACGTSISACITEKNNVFVWGTFRNF 113
Query: 204 NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
N YG +++Q TP+ ++ + + G + +L+ +++++G + LG
Sbjct: 114 NGVYGFDKNTKIQ-KTPKKITTKFEKFKFTSIECGSNFVCLLDKNKIIWTFGSNDFNELG 172
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+ + RS +L P +F + N K + G AI +Y WG N YGQL
Sbjct: 173 RRSSL-RSKDSSLFPGQIFSSRKKNENHKFRLVRCGRNHALAINTDNEVYAWGSNIYGQL 231
Query: 321 GLGTVEDQPFPLKVAV 336
G+G + K+ +
Sbjct: 232 GIGNDHETKNKHKINI 247
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP-RKKGNPLELVMSFVRIP 60
K T I CG F + DKN ++ G N ++LG R K + L F
Sbjct: 139 FKFTSIECGSNFVCLL----DKNKIIWTFGSNDFNELGRRSSLRSKDSSLFPGQIFSSRK 194
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K+ + + + + GR H + I + + +G+N +GQ G G D++ K N
Sbjct: 195 ---KNENHKFRLVRCGRNHALAINTDNEVYAWGSNIYGQLGIG----NDHETK----NKH 243
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ +MDA G H+LFLT GK+Y G GQ G+ NN +P L+ E +
Sbjct: 244 KINISNVMDAAGGLHHSLFLTFDGKLYGAGNNDQGQLGILGKNNCHSPELII-----ENV 298
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
K+ S + + D +F +G S G E++I TPR
Sbjct: 299 KKVKSYENYSICQID-NSLFSFGISFLGGTGFEEVEILTPR 338
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
K DIACG ++ A ++ N+ ++G N + G+ K + P ++ F +
Sbjct: 84 KPIDIACGT--SISACITEKNNVFVWGTFRNFNGVYGFDKNTKIQKTPKKITTKFEKF-- 139
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-RGIVQEED---YQGKWFCH 117
+ + G ++ N+ +TFG+N F + G R ++ +D + G+ F
Sbjct: 140 -------KFTSIECGSNFVCLLDKNKIIWTFGSNDFNELGRRSSLRSKDSSLFPGQIFSS 192
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ E K CG++H L + +VY+ G GQ G+G N+ ET + +I
Sbjct: 193 RKKN-ENHKFRLVRCGRNHALAINTDNEVYAWGSNIYGQLGIG--NDHETKN--KHKINI 247
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
++ + + L ++ G ++G GN++ GQ+
Sbjct: 248 SNVMDAAGGLHHSLFLTFDGKLYGAGNNDQGQL 280
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 108/276 (39%), Gaps = 47/276 (17%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +IK + G HT+V+T++ F++G N GR +E Y + + EK
Sbjct: 34 NIKIKKVKCGTIHTLVLTEDNKLFSWGCNDEYALGRS--GDEFYPQEV-------ILPEK 84
Query: 127 IMDAVCGQDHTLFLTESGKVYSCG--------WGADGQTGLGHLNNQETPCLVRGEIEGE 178
+D CG + +TE V+ G +G D T + Q+TP + + E
Sbjct: 85 PIDIACGTSISACITEKNNVFVWGTFRNFNGVYGFDKNTKI-----QKTPKKITTKFEKF 139
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-------- 230
+ + + V + ++ +G++++ ++ S L + S
Sbjct: 140 KFTSIECGSNFVCLLDKNKIIWTFGSNDFNELGRRSSLRSKDSSLFPGQIFSSRKKNENH 199
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ V G + +N + VY+WG YG LG G K H+ N
Sbjct: 200 KFRLVRCGRNHALAINTDNEVYAWGSNIYGQLGIGNDHETKNK-----------HKINIS 248
Query: 288 SKVESLIAGPCTFGAITNF-GHLYMWGKNQYGQLGL 322
+ +++ AG F G LY G N GQLG+
Sbjct: 249 NVMDA--AGGLHHSLFLTFDGKLYGAGNNDQGQLGI 282
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 30/256 (11%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +GN S GQ G G ++EE I + CG HTLFLT SGKVY+C
Sbjct: 4 YCWGNASHGQLGLGGIEEEQILTP---SRIPWKPDSAVNQIACGHRHTLFLTASGKVYAC 60
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++ + LGH + P + E++ I +++ +A+S+ G VF WG++E GQ
Sbjct: 61 --GSNDYSQLGHELPTKRPLQI-PELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQ 117
Query: 210 ISESEMQ--ISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
+ + Q + P+++ VS+ +V +A G + L G +YSWG L GQ S
Sbjct: 118 LGHASDQDIVKLPKIVRNL--VSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSS 175
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA--------ITNFGHLYMWGKNQYG 318
P+ L Q N ++ +L+ P + A I+ ++ WG+N G
Sbjct: 176 --------PNDL---QQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCG 224
Query: 319 QLGLGTVEDQPFPLKV 334
QLGL ++ +P ++
Sbjct: 225 QLGLNDETNRAYPTQL 240
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 33/294 (11%)
Query: 51 ELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
E +++ RIP P + + +A G HT+ +T + + G+N + Q G + +
Sbjct: 22 EQILTPSRIPW---KPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPL 78
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--- 167
Q I +L+ I CG H++ L+E G+V+S WG + LGH ++Q+
Sbjct: 79 Q-------IPELQDYVITQIACGSRHSMALSEWGQVFS--WGDNECGQLGHASDQDIVKL 129
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQIS-TPRVL 223
P +VR + + +V+++ + LA++ G+++ WG++ YGQ+ S +++Q S TP L
Sbjct: 130 PKIVRNLV-SKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRL 188
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFG 280
+ G+ + +A GG+ +++ V+ WG G LG + +R+ L G
Sbjct: 189 TTLLGIP-VSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 247
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V + G +T G ++ G YGQLG G ++ P V
Sbjct: 248 ---------VRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 292
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP---RKKGNPLELVMSFVRIP 60
+ IACG ++ T + L+ G N QLG P ++ P+ L + + IP
Sbjct: 141 VVQIACGSNHSLALTCCGE----LYSWGSNLYGQLGVSSPNDLQQSNTPMRLT-TLLGIP 195
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ +A G H+ +I+ + F +G N+ GQ G D + + +
Sbjct: 196 ---------VSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLN-----DETNRAYPTQLK 241
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L + CG + ++FLT G V++CG GA GQ G G +N+ P +V E+ G I
Sbjct: 242 TLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMGSTI 300
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ LA V +G ++G+G GQ+
Sbjct: 301 SQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I ++ IACG + + +KS +FG G N+ QLG +D + P +L +R
Sbjct: 194 IPVSAIACGGNHSFLISKSS----AVFGWGRNNCGQLGLNDETNRAYPTQL--KTLR--- 244
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ ++ +A G ++ +T G FT G ++GQ G G E + +
Sbjct: 245 -----TLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNE-----MLPRMVME 294
Query: 122 LEGEKIMDAVCGQDHTLFLTES-GKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G I CG HTL L S G++Y G G+ GQ G + + P LV G
Sbjct: 295 LMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQLVIG 347
>gi|440905239|gb|ELR55645.1| Secretion-regulating guanine nucleotide exchange factor, partial
[Bos grunniens mutus]
Length = 338
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG E V+S ++ K S IK + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGLGHK-------EDVLSAQQLSDFCK--SGCIKRITGGGGHSAVVTDE 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G +E Y L G I CG D T+ LTE+G+V
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLY-----FTPCKSLLGCAIQQVACGWDFTIILTENGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C++ IE E++V +++ + LA + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGT 179
Query: 205 SEY--------GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
GQ + P ++ + S+ V V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLEN-SQAVCVLAGSDHSASLTDAGELYVWGS 238
Query: 257 GLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
GQ + + + P I + F K+ ++ +G A T G ++ WG+
Sbjct: 239 NKHGQLASQAAFLLLPQRIEARCF------QNEKIAAVWSGWTHLVAQTVTGKVFTWGRA 292
Query: 316 QYGQLGLGTVEDQ 328
YGQLG TVE +
Sbjct: 293 DYGQLGR-TVETR 304
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ N ++ CG NS QLG H PR+ IP
Sbjct: 103 IQQVACGWDFTIILTE----NGQVLSCGSNSFGQLGVPHGPRR-----------CVIPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ ++ +A G H + T + F +G GR + + + +
Sbjct: 148 IELLREKVVSIAAGLRHALAATASGTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTV 206
Query: 123 EGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
G + AVC G DH+ LT++G++Y WG++ G L +Q L+ IE
Sbjct: 207 TGLENSQAVCVLAGSDHSASLTDAGELYV--WGSNKH---GQLASQAAFLLLPQRIEARC 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
E+I + S ++A + G VF WG ++YGQ+ +
Sbjct: 262 FQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRT 300
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 30/250 (12%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT---GRAHTIVITD 85
CG NS QLG +KG P R P + P+ + H+A G+ H++ +
Sbjct: 46 SCGDNSRGQLG-----RKGTP--------RGEQPERIPALETLHVALVSCGKEHSLAVCH 92
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G S GQ G G +E + K I L G KI+ CG H++ L+E G+
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPK----KIKTLAGIKIIQVACGHYHSVALSEDGQ 148
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FGWG+
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207
Query: 205 SEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
+ GQ++ S +Q P + K + +V ++ G +L +G V+++G YG
Sbjct: 208 NNAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVFTFGDNSYG 266
Query: 258 LLGQGPKVSR 267
LG P +
Sbjct: 267 QLGHDPTAEK 276
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 37/263 (14%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
A+G H++++ + + G+NS GQ GR G + E + I LE + C
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE------RIPALETLHVALVSC 82
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCV 190
G++H+L + G+V++ G ++GQ G+G +ET + + + G +I++++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEF--KETTFIPKKIKTLAGIKIIQVACGHYHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+A+S+ G VF WG + +GQ+ E Q S RV S +G+ + VA+GG L+
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGHHSFALSL 198
Query: 248 EGLVYSWG------YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
G + WG L G V R KP I + K +++ C +
Sbjct: 199 SGTSFGWGSNNAGQLALSGNNAPVQR-YKPVSIGAL-----------KTLGVVSISCGYK 246
Query: 301 --GAITNFGHLYMWGKNQYGQLG 321
+T G ++ +G N YGQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L G V SCG + GQ G E P + +E + +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPA-LETLHVALV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG + GQ+ E + +T P+ + G+ +I+ VA G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG +G LG G + P + S + P ++V + G
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL-----EGIPLAQVAA--GGHH 192
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
+F A++ G + WG N GQL L
Sbjct: 193 SF-ALSLSGTSFGWGSNNAGQLALS 216
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG+ +V ++ ++F G NS QLG + V S IPL
Sbjct: 128 IKIIQVACGHYHSVALSEDG----QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCH 117
+A G H+ ++ + +F +G+N+ GQ VQ ++
Sbjct: 184 A---------QVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQ------RYKPV 228
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+I L+ ++ CG HT LT+ GKV++ G + GQ G + P LV
Sbjct: 229 SIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV------ 282
Query: 178 ERIVKLSSAVDC 189
ERI L S +DC
Sbjct: 283 ERIEGLVSQIDC 294
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 3 KITDIAC--GYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
K+ ++C G +V T + +++ CG N+ QLG K L LV S
Sbjct: 135 KVVQVSCFNGAEHVLVVTSAG----QVYSCGCNNHGQLGL-GSTKMSPSLLLVESL---- 185
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
KH ++ + H++V++ + AF+FG N GQ G G + H +
Sbjct: 186 ---KH--VRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGT-----RPNQLLPHRVE 235
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ A CGQ HT+FLTE G V+SCG +GQ GLG ++ P L+ E
Sbjct: 236 LPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQE---- 291
Query: 181 VKLSSAVDC----VLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDV 235
+ +S + C V + G +F +G + GQ+ +S+P + + V ++V +
Sbjct: 292 -RPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNV-KVVKI 349
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
+ G +L++ G ++S+G +G LG G R + P L+PS
Sbjct: 350 SCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDR-LVPVLVPS 392
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 148/366 (40%), Gaps = 75/366 (20%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F CG N +LG H ++ + LV S R +I +A G + +T+
Sbjct: 42 VFACGQNRKGELG-HSTFREQVEMSLVQSLRR---------KRIVKVAAGSETSYFLTEE 91
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE----KIMDAVC--GQDHTLFL 140
+ G NS GQ R Q + K + +I +EG K++ C G +H L +
Sbjct: 92 GKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVV 151
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDV 199
T +G+VYSCG GQ GLG + + +P L+ E ++ R++ S + + VS G
Sbjct: 152 TSAGQVYSCGCNNHGQLGLG--STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSA 209
Query: 200 FGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
F +G ++ GQ I Q+ RV + R+ A G L +EG+V+S G
Sbjct: 210 FSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLA--ACGQYHTIFLTEEGMVFSCGKN 267
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC---------TFG------- 301
L GQ SRS T +P TL Q P S + + C TFG
Sbjct: 268 LNGQLGLGSRS--STNVP-TLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQL 324
Query: 302 ---------------------------------AITNFGHLYMWGKNQYGQLGLGTVEDQ 328
++ G L+ +G N +GQLGLG D+
Sbjct: 325 GLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDR 384
Query: 329 PFPLKV 334
P+ V
Sbjct: 385 LVPVLV 390
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ +C Y +VV + F GLN QLG P +L+ V +P
Sbjct: 188 VRVLSASCSYHHSVVVSSDGSA----FSFGLNDCGQLGI-----GTRPNQLLPHRVELPS 238
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P ++ A G+ HTI +T+ F+ G N GQ G G + IA
Sbjct: 239 P-----HLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTL-----IAA 288
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ CG HT + E GK+++ G+ GQ GLGH ++ +P V + ++V
Sbjct: 289 LQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVE-TLRNVKVV 347
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
K+S +S+ G+++ +G + +GQ+
Sbjct: 348 KISCGTHFTCVLSESGELWSFGCNCHGQL 376
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 119/309 (38%), Gaps = 73/309 (23%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
G F G N G+ G +E+ + L ++I+ G + + FLTE GKVY
Sbjct: 41 GVFACGQNRKGELGHSTFREQVEMSL-----VQSLRRKRIVKVAAGSETSYFLTEEGKVY 95
Query: 148 SCGWGADGQ----TGLGHLNNQETPC----LVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
CG + GQ T G N + L+ G ++V++S + + VL V+ G
Sbjct: 96 CCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAG 155
Query: 198 DVFGWGNSEYGQISESEMQISTP----------RVLSQCKGVSRIVDVASGGSACT---- 243
V+ G + +GQ+ ++S RVLS V V+S GSA +
Sbjct: 156 QVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLN 215
Query: 244 --------------------------------------MLNDEGLVYSWGYGLLGQGPKV 265
L +EG+V+S G L GQ
Sbjct: 216 DCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLG 275
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
SRS T +P TL Q P S + + C + G L+ +G N GQLGLG
Sbjct: 276 SRS--STNVP-TLIAALQERPASMIACGYSHTCV---VLEDGKLFTFGYNHQGQLGLGHT 329
Query: 326 EDQPFPLKV 334
+ P++V
Sbjct: 330 DSVSSPMQV 338
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCHNIADLEGEKIM 128
L+ G HT ++T N + FG+N++GQ G G I+ K C I L+ EK+
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-------KPTC--IKALKPEKVK 128
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A CG++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ +
Sbjct: 129 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN 188
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+++ G +F WG++ GQI E + + P ++ K +S I + G +
Sbjct: 189 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTM 245
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG 301
+G +Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 246 DGELYTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGG 291
Query: 302 AITNFGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 292 HTVVLTEKVVYAFGLGQFGQLGLGT 316
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT---- 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 230 ISWISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 332 DQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 227
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 58 RIPLPVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
R P+PV+ P T + +A H++ +T +G NSFGQ G G
Sbjct: 77 RTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQLGDGTTASSRTPVP--- 133
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ G + G H+L +T +G V++ G A GQ G G + P VR +
Sbjct: 134 --VRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPV- 190
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDV 235
G + ++ + LAV+ G WG++ +GQ+ + + STP + Q V+ V
Sbjct: 191 GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQLPTVTA---V 247
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
A+G L G VY+WG +G LG G S S P + + + +
Sbjct: 248 AAGDVHSLALTSTGTVYAWGANSFGQLGDG-STSDSSTPIAV--------RVPAGTTATA 298
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+++G A+T G WG N GQLG G P+ V V G
Sbjct: 299 VVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPG 344
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 22/251 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKVYS 148
+G+NSFGQ G G L + A+ G D H+L LT G V +
Sbjct: 58 LAWGDNSFGQFGNGTTASSRTPVP------VRLPVGTTVTAIAGSDTHSLALTSVGTVLA 111
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G + GQ G G + TP VR + G + +++ LA++ G VF WG++ G
Sbjct: 112 WGGNSFGQLGDGTTASSRTPVPVRLPV-GTTVTAIAAGTSHSLAITATGAVFAWGDNAVG 170
Query: 209 QISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
Q+ + S+ V + + + +A G + G +WG +G LG G
Sbjct: 171 QLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDG-TT 229
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ S P +P Q V ++ AG A+T+ G +Y WG N +GQLG G+
Sbjct: 230 TGSSTPITVP-------QL---PTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGST 279
Query: 326 EDQPFPLKVAV 336
D P+ V V
Sbjct: 280 SDSSTPIAVRV 290
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 111/291 (38%), Gaps = 37/291 (12%)
Query: 58 RIPLPVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
R P+PV+ P T + +A G +H++ IT F +G+N+ GQ G G +
Sbjct: 129 RTPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVP--- 185
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ G + G H+L + +G + G A GQ G G TP V +
Sbjct: 186 --VRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVP---Q 240
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
+ +++ LA++ G V+ WG + +GQ+ + S+ + + + V
Sbjct: 241 LPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVV 300
Query: 237 SGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMK--------PTLIPSTLFGQHQFN 285
SG L G +W G G LG G V S TL + H
Sbjct: 301 SGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPGGATLTAVAIHRDHAV- 359
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T+ W +N GQLG GT D P+ V++
Sbjct: 360 ----------------AVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSL 394
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+R + A D +LA WG++ +GQ S V + + + +A
Sbjct: 45 QRTPTAAVATDTILA---------WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAG 95
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKV-SRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+ L G V +WG +G LG G SR+ P +P + V ++
Sbjct: 96 SDTHSLALTSVGTVLAWGGNSFGQLGDGTTASSRTPVPVRLPV----------GTTVTAI 145
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLKVAVG 337
AG AIT G ++ WG N GQLG GT D P P+++ VG
Sbjct: 146 AAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVG 191
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 98/290 (33%), Gaps = 78/290 (26%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+T IA G ++ T + +F G N+ QLG + + +P+P
Sbjct: 141 TVTAIAAGTSHSLAITATG----AVFAWGDNAVGQLG-----------DGTTTDSSLPVP 185
Query: 63 VKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V+ P T + +A G H++ + +G+N+FGQ G G I
Sbjct: 186 VRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTP-------ITV 238
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVR------- 172
+ + G H+L LT +G VY+ WGA+ GQ G G ++ TP VR
Sbjct: 239 PQLPTVTAVAAGDVHSLALTSTGTVYA--WGANSFGQLGDGSTSDSSTPIAVRVPAGTTA 296
Query: 173 ---------------------------GEIEGERIVKLSSAV-----------------D 188
G++ V S+ V D
Sbjct: 297 TAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPGGATLTAVAIHRD 356
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+AV+ W + GQ+ S+ V + I VA G
Sbjct: 357 HAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSLPAGTAITAVAVG 406
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 22/254 (8%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T IACG+ TV T++ L G + QLG+ GN ++ V P V
Sbjct: 89 VTHIACGFKHTVAVTETG----ALASWGGDEYGQLGF----DSGNIVDGVQ-----PRIV 135
Query: 64 K-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K +A G HT+ +T + ++FG+ S G G G + G + L
Sbjct: 136 KGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHG-----NLDGCSTPSLVKSL 190
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G + CG++H+ LT GKV++ G G GQ G G N + P V+ ++ + +++
Sbjct: 191 WGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHD-VIQ 249
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ D LA++ G +F WG+ +GQ ++ + +P+ + Q +G +V V++G
Sbjct: 250 IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEG-RVLVQVSAGARH 308
Query: 242 CTMLNDEGLVYSWG 255
+L D G VY WG
Sbjct: 309 TVVLLDRGEVYGWG 322
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 22/271 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I H+A HT +TD +T G+N GQ G ++E+ + +A L+ +
Sbjct: 37 IVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIR-----VAALDTHMVTH 91
Query: 130 AVCGQDHTLFLTESGKVYSCGWGAD--GQTGL--GHLNNQETPCLVRGEIEGERIVKLSS 185
CG HT+ +TE+G + S WG D GQ G G++ + P +V+G + ++++
Sbjct: 92 IACGFKHTVAVTETGALAS--WGGDEYGQLGFDSGNIVDGVQPRIVKGSRD-LHFSRVAA 148
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ GDV+ +G+ G + + STP ++ G+ + +A G +
Sbjct: 149 GGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLG-VTQIACGENHSAA 207
Query: 245 LNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
L +G V++WG G GQ G ++++K + L ++ G T AI
Sbjct: 208 LTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALV------DHDVIQIACGGDHTL-AI 260
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ G L+ WG +GQ G GT ED P +V
Sbjct: 261 TSDGRLFSWGHGLWGQTGHGTKEDVLSPKQV 291
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 22/251 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ G GQ G G DY +++ L G+ I+ HT FLT+ G+VY+
Sbjct: 5 YALGRGDLGQLGIG-----DYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTT 59
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ G+ + Q P V ++ + ++ +AV++ G + WG EYGQ
Sbjct: 60 GSNDAGQLGVRGMEEQVVPIRV-AALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118
Query: 210 ISESEMQIST---PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
+ I PR++ + + VA+GG L G VYS+G G LG G
Sbjct: 119 LGFDSGNIVDGVQPRIVKGSRDL-HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHG- 176
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P+L+ S L+G V + G A+T G ++ WG+ +YGQLG G
Sbjct: 177 NLDGCSTPSLVKS-LWGL-------GVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 324 TVEDQPFPLKV 334
+ ++ P+ V
Sbjct: 229 STQNIKLPVAV 239
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G H+ +T + FT+G +GQ G G Q + L ++
Sbjct: 195 VTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVA-----VKALVDHDVIQ 249
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG DHTL +T G+++S G G GQTG G + +P V ++EG +V++S+
Sbjct: 250 IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH-QLEGRVLVQVSAGARH 308
Query: 190 VLAVSDKGDVFGWGNSEYGQI 210
+ + D+G+V+GWG+ E Q+
Sbjct: 309 TVVLLDRGEVYGWGDCEQRQL 329
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCHNIADLEGEKIM 128
L+ G HT ++T N + FG+N++GQ G G I+ K C I L+ EK+
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-------KPTC--IKALKPEKVK 128
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A CG++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ +
Sbjct: 129 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN 188
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+++ G +F WG++ GQI E + + P ++ K +S I + G +
Sbjct: 189 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTM 245
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG 301
+G +Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 246 DGELYTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGG 291
Query: 302 AITNFGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 292 HTVVLTEKVVYAFGLGQFGQLGLGT 316
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT---- 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 233 ISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRVLGI 279
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++ +K
Sbjct: 280 PERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQK 334
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 335 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 227
>gi|374723895|gb|EHR75975.1| putative regulator of chromosome condensation RCC1 [uncultured
marine group II euryarchaeote]
Length = 2189
Score = 87.8 bits (216), Expect = 7e-15, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 125/309 (40%), Gaps = 35/309 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N QLG + +G + + R P+ V G+ HT V+ DN +
Sbjct: 701 GWNGQGQLGLGNTTNQGAATFVDLGTGRSPIKV----------TLGQLHTCVLLDNNSVY 750
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL-EGEKIMDAVCGQDHTLFLTESGKVYSC 149
G+N++GQ G G +++ D G +D G HT L ++G V
Sbjct: 751 CMGDNTYGQVGDGTTVDKNSP------TFVDFGNGRYAVDIESGDVHTCALLDNGSVSCW 804
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+ A GQ GLGH TP V + G + L++ D GDV G ++
Sbjct: 805 GYNAYGQLGLGHTT---TPVSVPTYVPLALGRHVASLATGQHHTCFAYDNGDVACTGRNQ 861
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW---GYGLLGQGP 263
GQ+ T +Q G + VA +C +LN+ G V W GYG LG
Sbjct: 862 QGQLGIGNTAQKTTLTATQSLGNPALKVVAGSYFSCALLNN-GSVRCWGDNGYGQLGINT 920
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ + + QF S +I+G A + G + WG+N GQLG+G
Sbjct: 921 NIDSTSPAASV--------QFESGSYAIDVISGLEHLCARLSNGSMTCWGRNHVGQLGIG 972
Query: 324 TVEDQPFPL 332
+ +Q P+
Sbjct: 973 NILNQDEPV 981
Score = 74.3 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 79/276 (28%), Positives = 106/276 (38%), Gaps = 18/276 (6%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+ L V +T I H H I DN +G N GQ G G +
Sbjct: 667 VDLGVGRTATSIAHGGVASYHGCAILDNNSLSCWGWNGQGQLGLGNTTNQG------AAT 720
Query: 119 IADL-EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
DL G + GQ HT L ++ VY G GQ G G ++ +P V G
Sbjct: 721 FVDLGTGRSPIKVTLGQLHTCVLLDNNSVYCMGDNTYGQVGDGTTVDKNSPTFVDFG-NG 779
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDV 235
V + S A+ D G V WG + YGQ + + +S P + G + +
Sbjct: 780 RYAVDIESGDVHTCALLDNGSVSCWGYNAYGQLGLGHTTTPVSVPTYVPLALG-RHVASL 838
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A+G D G V G GQ + + K TL + G NP KV +A
Sbjct: 839 ATGQHHTCFAYDNGDVACTGRNQQGQLGIGNTAQKTTLTATQSLG----NPALKV---VA 891
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G A+ N G + WG N YGQLG+ T D P
Sbjct: 892 GSYFSCALLNNGSVRCWGDNGYGQLGINTNIDSTSP 927
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 48 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 95
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 96 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 147
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 148 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 206
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 207 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 265
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 266 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 316
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 317 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 346
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 136 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 186 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 238
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 239 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 297
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 298 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 355
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 33 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 91
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 92 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 150
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 151 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 202
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T+ G ++ WG +G+LG G E P +
Sbjct: 203 -ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 235
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 1076 IKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRP-----RVIESLRGIEV 1130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 1131 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 1189
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 1190 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 1248
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 1249 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 1299
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 1300 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 1339
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 1128 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 1178
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 1179 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 1230
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 1231 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 1289
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 1290 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 1346
Query: 240 SACTM 244
SA T+
Sbjct: 1347 SAHTL 1351
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 992 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 1045
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG ++
Sbjct: 1046 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAK 1104
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 1105 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 1163
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 1164 DSEDQ-LKPKLVEA-LQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 1216
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 1217 GGSDGCKVPMKI 1228
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 980 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 1034
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 1035 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 1094
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 1095 GEVYSWGEAKDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 1145
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 1146 AGDLYTWGKGRYGRLGHSDSEDQLKP 1171
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 1242 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 1296
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 1297 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 1354
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 294 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 348
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 349 RVACGSSHSVAWT 361
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 45/313 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +PLP S +K +A +G H
Sbjct: 1317 KVYACGEATNGRLG------------LGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHA 1364
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 1365 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 1416
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+V+++ S LA++D
Sbjct: 1417 AALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVK-VLLGHRVVQVACGSRDAQTLALTD 1475
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 1476 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 1534
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 1535 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 1585
Query: 312 WGKNQYGQLGLGT 324
WG N +GQ G GT
Sbjct: 1586 WGDNDHGQQGNGT 1598
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D + P V++ L
Sbjct: 1405 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGDTTTQLKP-----KMVKVLL- 1454
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 1455 -GHRVVQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 1507
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 1508 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 1566
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 1567 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 1624
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 101 GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG 160
GR +EED L ++ G +T GKVY+CG +G+ GLG
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332
Query: 161 HLNNQETPCLVRGEIEGERIVK---LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQ 216
L++ P + +VK + S A++ G VF WG + G++ S M
Sbjct: 1333 -LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 1391
Query: 217 ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL 273
PR++ K RI D+A G S L G +Y+WG YG LG G ++ +KP +
Sbjct: 1392 CDKPRLIEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQ-LKPKM 1449
Query: 274 IPSTLFGQH--QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ L G Q S+ + A+T+ G ++ WG +G+LG G E
Sbjct: 1450 V-KVLLGHRVVQVACGSRDAQTL-------ALTDEGLVFSWGDGDFGKLGRGGSE 1496
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 2347 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRP-----RVIESLRGIEV 2401
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 2402 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVGIACGS 2460
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 2461 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVRVECGSQFSVA 2519
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q K ++ G
Sbjct: 2520 LTKAGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKAIAIATGSLHCV 2570
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 2571 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 2610
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 2263 YGWGHNHRGQLGG--IEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAVTADGKLYA 2316
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 2317 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 2375
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ S PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 2376 DGKLGHGSRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 2434
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G +G +T+ ++ WG YG+LG
Sbjct: 2435 DSEDQ-LKPKLV-EALQGHRVVGIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 2487
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 2488 GGSDGCKVPMKI 2499
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 2251 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTL 2305
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 2306 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 2365
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 2366 GEVYSWGEAEDGKLGHGSR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 2416
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 2417 AGDLYTWGKGRYGRLGHSDSEDQLKP 2442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 2399 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 2449
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 2450 --GHRVVGIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 2501
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT++G VY+ G G + G G ++ P V+G ++G++ +
Sbjct: 2502 LTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKAI 2560
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 2561 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 2617
Query: 240 SACTM 244
SA T+
Sbjct: 2618 SAHTL 2622
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 1563 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 1617
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 1618 RVACGSSHSVAWT 1630
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEGGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ ++ +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLTTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEGGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G ++ + I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRL----IQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
N G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 NGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + + +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G YGQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S+GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSYGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4144
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4145 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSSDGS 4203
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4204 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4262
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4263 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4314
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4315 NSEGQLGLGHTNHVREPTLVTV 4336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P I+ +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIRKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIR--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4014 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4068
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4069 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4127
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4128 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4184
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4185 IGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4237
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4238 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4284
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4238 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4292
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4293 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4347
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + R V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3993 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4049
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4050 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4100
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4101 FSWGDGDYGKLGHGNSDRQRRPRQI 4125
>gi|115496664|ref|NP_001069489.1| secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
gi|117940126|sp|Q3MHW0.1|SRGEF_BOVIN RecName: Full=Secretion-regulating guanine nucleotide exchange
factor
gi|75773727|gb|AAI04611.1| Secretion regulating guanine nucleotide exchange factor [Bos
taurus]
gi|296480129|tpg|DAA22244.1| TPA: secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
Length = 464
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG E V+S ++ K S IK + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGLGHK-------EDVLSAQQLSDFCK--SGCIKRITGGGGHSAVVTDE 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G +E Y L G I CG D T+ LTE+G+V
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTP-----CKSLLGCAIQQVACGWDFTIILTENGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C++ IE E++V +++ + LA + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGT 179
Query: 205 SEY--------GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
GQ + P ++ + S+ V V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLEN-SQAVCVLAGSDHSASLTDAGELYVWGS 238
Query: 257 GLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
GQ + + + P I + F K+ ++ +G A T G ++ WG+
Sbjct: 239 NKHGQLASQAAFLLLPQRIEARCF------QNEKIAAVWSGWTHLVAQTVTGKVFTWGRA 292
Query: 316 QYGQLGLGTVEDQ 328
YGQLG TVE +
Sbjct: 293 DYGQLGR-TVETR 304
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 127/307 (41%), Gaps = 57/307 (18%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ N ++ CG NS QLG H PR+ IP
Sbjct: 103 IQQVACGWDFTIILTE----NGQVLSCGSNSFGQLGVPHGPRR-----------CVIPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ ++ +A G H + T + F +G GR + + + +
Sbjct: 148 IELLREKVVSIAAGLRHALAATASGTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTV 206
Query: 123 EGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
G + AVC G DH+ LT++G++Y WG++ G L +Q L+ IE
Sbjct: 207 TGLENSQAVCVLAGSDHSASLTDAGELYV--WGSNKH---GQLASQAAFLLLPQRIEARC 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS---------ESEM---------- 215
E+I + S ++A + G VF WG ++YGQ+ ESE
Sbjct: 262 FQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGP 321
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPT 272
Q TP L G + I S GS + G+ +SWG+ G+ G G + P
Sbjct: 322 QKGTPSCLPCLTGATEI----SCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEAD-VWAPK 376
Query: 273 LIPSTLF 279
+P F
Sbjct: 377 PVPGLRF 383
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
K++ CG ++ +LG L +S IP+P + + +K +A +G H
Sbjct: 2998 KIYACGEATNGRLG------------LGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHA 3045
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ +T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3046 MALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3097
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++YS G G G+ G G Q P LV+ + G R+++++ S LA++D
Sbjct: 3098 AAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTD 3156
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3157 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3215
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3216 GKGDYFRLGHGTDV-HVRKPQMVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYA 3266
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3296
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ VIT + +T+G ++G+ G G ED + L+
Sbjct: 533 KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHG--SSEDQTTPML---VTALK 587
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP LV +++ IV
Sbjct: 588 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE-KLQDLDIV 646
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ ++ + P++L +G ++VDVA G +
Sbjct: 647 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQG-KKVVDVAVGST 705
Query: 241 ACTMLNDEGLVYSWGYG-LLGQGPKVSRSMKPTLIP 275
C L D+G V+SWG L +S +P +P
Sbjct: 706 HCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKALP 741
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3086 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NATQLRPKLVKVLL- 3135
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3136 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3188
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3189 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVH 3247
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3248 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3305
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 119 IADLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV---RG 173
I L KI+ D H L L+ +G+V+S G G G+ G G E P ++ G
Sbjct: 473 IHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNG 532
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRI 232
+ G+ +V ++ ++ G+++ WG YG++ S +TP +++ KG+ ++
Sbjct: 533 KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGL-KV 591
Query: 233 VDVASG-GSACTM-LNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFG 280
VDVA G G A T+ + + G V+SWG YG LG+G PK+ ++ I G
Sbjct: 592 VDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCG 651
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
QF+ A+T G +Y WGK +LG GT E FP
Sbjct: 652 S-QFSV---------------ALTKDGQVYTWGKGDNQRLGHGTDEHVRFP 686
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GK+Y+CG +G+ GLG L++ P + +VK + S
Sbjct: 2983 VAGGSKSLFAVTVEGKIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSG 3041
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3042 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3100
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +YSWG YG LG G ++ ++P L+ L G Q S+ +
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGDNATQ-LRPKLV-KVLLGHRVIQVACGSRDAQTL------ 3152
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3153 -ALTDEGLVFSWGDGDFGKLGRGGSE 3177
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQ--EEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + ++ N F++G G+ G G EE F A G+ ++ CG +
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQA---GKHVVHIACGSTY 548
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVS 194
+ +T G++Y+ G G G+ G G +Q TP LV ++G ++V ++ S LAV+
Sbjct: 549 SAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAVT 607
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + IV V G L +G VY+
Sbjct: 608 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLD-IVKVCCGSQFSVALTKDGQVYT 666
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G P L+ TL G+ KV + G A+T+ G ++
Sbjct: 667 WGKGDNQRLGHGTDEHVRF-PKLL-DTLQGK-------KVVDVAVGSTHCLALTDDGEVH 717
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 718 SWGSNDKLQ 726
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD 188
+ G + TLF +T GK+Y+ G+GA G+ G+G + TP L+ + R V ++S
Sbjct: 3978 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGK 4037
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA+S +G+V+ WG +E G++ + PRV+ +GV +VD+A+GG+ +
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGV-EVVDIAAGGAHSACITA 4096
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G +++WG YG LG G + +KP L+ L G + +G +T
Sbjct: 4097 SGELFTWGKGRYGRLGHGDSEDQ-LKPKLV-DALQGHRVIDVACG-----SGDAQTLCLT 4149
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ ++ WG YG+LG G + P+K+
Sbjct: 4150 DDDMVWSWGDGDYGKLGRGGSDGCKIPMKI 4179
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I L
Sbjct: 4022 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESL 4076
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +++D G H+ +T SG++++ G G G+ G G +Q P LV ++G R++
Sbjct: 4077 RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA-LQGHRVID 4135
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L ++D V+ WG+ +YG++ P + G+ + V G
Sbjct: 4136 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VTKVECGS 4194
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4195 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATG 4245
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4246 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4290
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R V+L + AV
Sbjct: 3931 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV 3988
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLV 251
+ G ++ G G++ + +STP +L + V R V V SGG C L+ EG V
Sbjct: 3989 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4048
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P +I S L G +V + AG IT G
Sbjct: 4049 YSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------VEVVDIAAGGAHSACITASGE 4099
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
L+ WGK +YG+LG G EDQ P
Sbjct: 4100 LFTWGKGRYGRLGHGDSEDQLKP 4122
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ DIA G + T S + LF G +LG+ D + P +LV +
Sbjct: 4079 VEVVDIAAGGAHSACITASGE----LFTWGKGRYGRLGHGDSEDQLKP-KLVDALQ---- 4129
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4130 --GHRVIDVA-CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----GSDGCKIPMKIDS 4181
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G + CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4182 LTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4240
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + ++ + G
Sbjct: 4241 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKINRVACG 4297
Query: 240 SACTM 244
SA T+
Sbjct: 4298 SAHTL 4302
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IACG ++ V T + L+ G + +LG+ + P+ LV + +
Sbjct: 539 VVHIACGSTYSAVITIDGE----LYTWGRGNYGRLGHGSSEDQTTPM-LVTALKGL---- 589
Query: 64 KHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A +G A T+ +T+N +++G+ +G+ GRG + + + D
Sbjct: 590 -----KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQD 642
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ I+ CG ++ LT+ G+VY+ G G + + G G + P L+ ++G+++V
Sbjct: 643 LD---IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLL-DTLQGKKVV 698
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
++ LA++D G+V WG+++ Q ++ P+ L G+ IV ++ G
Sbjct: 699 DVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKAL---PGLKHIVGISCG 752
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 109 DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+ G C +++ L +I VC + L L+ SG VY+ + + T L P
Sbjct: 424 NVSGPIHCKSLSSLGVTQI---VCSEKGFLILSSSGAVYTQNYKS---TTLA-------P 470
Query: 169 CLVRGEIEGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQ 225
L+ + +IVKL++ D LA+S G+VF WG + G++ + + P +++
Sbjct: 471 MLIHS-LSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAA 529
Query: 226 CKGV---SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLF 279
G +V +A G + ++ +G +Y+WG YG LG G ++ P L+ + L
Sbjct: 530 FNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTT-PMLV-TALK 587
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G + +G A+T G ++ WG YG+LG G
Sbjct: 588 GLKVVDVACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 626
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 231 RIVDVAS--GGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
+IV +A+ G L+ G V+SWG G LG G + +PT+I + FN
Sbjct: 480 KIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG-DATYLEEPTMIAA-------FN 531
Query: 286 PKSKVESLIAGPC--TFGA-ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
K + ++ C T+ A IT G LY WG+ YG+LG G+ EDQ P+ V A+ G K
Sbjct: 532 GKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 590
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ + G ++ +T + +T+G + + G G +D+ + + L+G+K++
Sbjct: 4187 VTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIA 4241
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H + TE G+VY+ G +GQ G G N + P LV ++G++I +++
Sbjct: 4242 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKINRVACGSAH 4300
Query: 190 VLAVS 194
LA S
Sbjct: 4301 TLAWS 4305
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3244 KIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3298
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3299 RVACGSSHSVAWT 3311
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 150/342 (43%), Gaps = 45/342 (13%)
Query: 11 YGFTVVATKSKDK-----NLKLFGCGLNSDSQLGYHDPRKKGN----PLELVMSFVRIPL 61
Y T V S++ + +LF G N LG H P K P++ + F
Sbjct: 41 YAVTAVVAGSRNSLAICDDGRLFTWGWNQRGTLG-HPPETKTESSPGPVDALAGF----- 94
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+I A G H + + D A+ +G N +GQCG ++ED + +I
Sbjct: 95 -------KIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGT-RALRRDIPI 146
Query: 122 LE----GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ K+ G H++ LT+ G V++ WG G + TP V+G +E
Sbjct: 147 PQRCALKLKVRQVAAGGTHSVVLTQEGHVWT--WGQPWPP--GDIKQISTPVRVQG-LEK 201
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
R++ + + + LA+++ ++ WGN+EYGQ+ + Q + + + +VD+A+
Sbjct: 202 VRVIAVGAFHN--LALTEDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 259
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
GG T L +G VY+WG +G LG G S M P + L G+ + +
Sbjct: 260 GGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHMVPLKV-ELLAGE-------DIVQVS 311
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G A+ G ++ +G+ +G+LG G P+++ +
Sbjct: 312 CGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPI 353
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 31/256 (12%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G +E+D+ H + L + V G ++L + + G++++
Sbjct: 11 LAWGSGEDGQLGMGGNEEKDWP-----HFVEALGPYAVTAVVAGSRNSLAICDDGRLFTW 65
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + +P V + G +IV+ + LAV DKG + WG +E
Sbjct: 66 GWNQRGT--LGHPPETKTESSPGPVDA-LAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNE 122
Query: 207 YGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + R L +C ++ VA+GG+ +L EG V++WG
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQ-- 180
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
P +K P + G KV + G A+T L+ WG N+YG
Sbjct: 181 ----PWPPGDIKQISTPVRVQGL------EKVRVIAVGAFHNLALTEDVILWAWGNNEYG 230
Query: 319 QLGLGTVEDQPFPLKV 334
QLG G + + P++V
Sbjct: 231 QLGTGDTQPRSQPIRV 246
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 26/163 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELV----MSFVR 58
K+ IA G + T+ ++ L+ G N QLG D + + P+ + +S V
Sbjct: 201 KVRVIAVGAFHNLALTE----DVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVD 256
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
I A G H+ +T + + +G G+ G G +D
Sbjct: 257 I--------------AAGGWHSTALTIDGEVYAWGRGEHGRLGFG----DDKSSHMVPLK 298
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH 161
+ L GE I+ CG H++ L G+++S G G G+ G G
Sbjct: 299 VELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGR 341
>gi|392944589|ref|ZP_10310231.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Frankia
sp. QA3]
gi|392287883|gb|EIV93907.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Frankia
sp. QA3]
Length = 408
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 19/246 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLTESGKVYS 148
+++G N G G G + + L G +++ G+ + G ++
Sbjct: 49 WSWGYNGLGHLGNGTTTNSAVPVR-----VTGLTGLTQVVGIAAGRYAGYAVHRDGTAWA 103
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G+ A GQ G G + N P V G R+V L+ A+ G V+ WG + YG
Sbjct: 104 WGYNAYGQLGNGTITNSAVPVRVSGL---TRVVALAGGSVNGYALRQDGTVWSWGYNNYG 160
Query: 209 QISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
Q+ S RV + G+ R++ +ASGG+ L +G V++WGY GQ + +
Sbjct: 161 QLGNGTTTNS--RVPVRVVGLDRVIAIASGGTTGYALRQDGTVWAWGYNDEGQLGNGTTA 218
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
P +P + G H V ++ G T A+ G ++ WG N +GQLG GTV
Sbjct: 219 NSP--LPVRVLGLH------GVRAIAGGQETGYALRRDGTVWAWGHNNHGQLGNGTVVSS 270
Query: 329 PFPLKV 334
P+ +
Sbjct: 271 TIPVAI 276
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 24/270 (8%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
TQ+ +A GR + + A+ +G N++GQ G G + + ++ L ++
Sbjct: 80 TQVVGIAAGRYAGYAVHRDGTAWAWGYNAYGQLGNGTITNSAVPVR-----VSGLT--RV 132
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G + L + G V+S G+ GQ G G N P V G +R++ ++S
Sbjct: 133 VALAGGSVNGYALRQDGTVWSWGYNNYGQLGNGTTTNSRVPVRVVGL---DRVIAIASGG 189
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+ G V+ WG ++ GQ+ S V + G+ + +A G L
Sbjct: 190 TTGYALRQDGTVWAWGYNDEGQLGNGTTANSPLPV--RVLGLHGVRAIAGGQETGYALRR 247
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WG+ G LG G VS ++ P I + + + + G + A+
Sbjct: 248 DGTVWAWGHNNHGQLGNGTVVSSTI-PVAI-------RNLSEVTAIAASSEGNSGY-ALR 298
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G + WG N GQLG GT + P++V
Sbjct: 299 GDGTAWAWGLNNTGQLGNGTDDTSLVPVQV 328
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 25/278 (8%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+PV+ T++ LA G + + + +++G N++GQ G G + +
Sbjct: 122 VPVRVSGLTRVVALAGGSVNGYALRQDGTVWSWGYNNYGQLGNGTTTNSRVPVR-----V 176
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L+ +++ G L + G V++ G+ +GQ G G N P V G + G R
Sbjct: 177 VGLD--RVIAIASGGTTGYALRQDGTVWAWGYNDEGQLGNGTTANSPLPVRVLG-LHGVR 233
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG 238
++ + A+ G V+ WG++ +GQ+ + ST P + V+ I + G
Sbjct: 234 --AIAGGQETGYALRRDGTVWAWGHNNHGQLGNGTVVSSTIPVAIRNLSEVTAIAASSEG 291
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
S + D G ++WG G LG G +L+P + G V ++ A
Sbjct: 292 NSGYALRGD-GTAWAWGLNNTGQLGNGTD-----DTSLVPVQVTGSTGL---VGVTAISA 342
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
G + A+ G ++ WG N +GQLG GT F L+
Sbjct: 343 GSFSGYAVRRDGTVWAWGSNFFGQLGNGTTTPS-FSLR 379
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 12/210 (5%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSF 97
GY+D + GN + PLPV+ ++ +A G+ + + + +G+N+
Sbjct: 205 GYNDEGQLGNG-----TTANSPLPVRVLGLHGVRAIAGGQETGYALRRDGTVWAWGHNNH 259
Query: 98 GQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
GQ G G V I +L + A + L G ++ G GQ
Sbjct: 260 GQLGNGTVVSST-----IPVAIRNLSEVTAIAASSEGNSGYALRGDGTAWAWGLNNTGQL 314
Query: 158 GLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
G G + P V G + +S+ AV G V+ WG++ +GQ+
Sbjct: 315 GNGTDDTSLVPVQVTGSTGLVGVTAISAGSFSGYAVRRDGTVWAWGSNFFGQLGNGTTTP 374
Query: 218 STPRVLSQCKGVSRIVDVASGG-SACTMLN 246
S + GV+R +A GG S T++N
Sbjct: 375 SFSLRPVRVSGVARAEAIAGGGFSGYTLVN 404
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+SWGY G LG G + + +P + G ++V + AG A+ G
Sbjct: 49 WSWGYNGLGHLGNGTTTNSA-----VPVRVTG---LTGLTQVVGIAAGRYAGYAVHRDGT 100
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ WG N YGQLG GT+ + P++V+
Sbjct: 101 AWAWGYNAYGQLGNGTITNSAVPVRVS 127
>gi|170067991|ref|XP_001868696.1| NIMA-family kinase NERCC1 [Culex quinquefasciatus]
gi|167864123|gb|EDS27506.1| NIMA-family kinase NERCC1 [Culex quinquefasciatus]
Length = 738
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 22/277 (7%)
Query: 62 PVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P++ P T +I+ LAT H +V+ + +T+G + GQ G ++ + + I
Sbjct: 402 PLQLPPTGKIRQLATQGTHFVVVMYDGSVYTWGEGNKGQLGHNALE----TWRHYPTKIE 457
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ ++ A G TL T+ G V SCG +G G G+ + P +V ++ RI
Sbjct: 458 SIRRYNVVGAATGNGFTLLWTDLGVVLSCGDNTEGCLGHGNTISLLIPKIVH-KLTNMRI 516
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASG 238
V+++ V+A+SD+GD+F WG S G + + +S+ PR L + + I ++ G
Sbjct: 517 VQIACGEHHVVALSDEGDLFTWGTSNEGALGLGKHMLSSNEPRRLIVSQMIQNIRQISCG 576
Query: 239 GSACTMLNDEGLVY---SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
+L D G Y S G+ LG G K+S+ L G + + ++ ++
Sbjct: 577 PDCTVVLTDGGFCYCCGSNGFNKLGFGAKLSQ----------LHGLQKVSFITQKVLAVS 626
Query: 296 GPCTFGA-ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
TF A + G++ G N GQLGLG +Q P
Sbjct: 627 VAETFAAFLIEGGYVVTAGDNSSGQLGLGHTNEQLEP 663
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 24/205 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN-PLELVMSFVRIP 60
++I IACG V + D LF G +++ LG N P L++S
Sbjct: 514 MRIVQIACGEHHVVALSDEGD----LFTWGTSNEGALGLGKHMLSSNEPRRLIVS----- 564
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHN 118
I+ ++ G T+V+TD + G+N F + G G + Q Q F
Sbjct: 565 ----QMIQNIRQISCGPDCTVVLTDGGFCYCCGSNGFNKLGFGAKLSQLHGLQKVSFI-- 618
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+K++ + FL E G V + G + GQ GLGH N Q P L++ +
Sbjct: 619 -----TQKVLAVSVAETFAAFLIEGGYVVTAGDNSSGQLGLGHTNEQLEPTLLKS-LMPR 672
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWG 203
+ K+ +A +D V WG
Sbjct: 673 FVTKIRCQSSYTIATTDDNCVVFWG 697
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +A G H++ + ++ + +G N+ GQ G I + + ++L G+K+
Sbjct: 183 RIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVN----SNLAGKKVA 238
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CGQ T+ L E+G+VY G+ GQ G+G+ NQ TPC + G + G IVK++
Sbjct: 239 QIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQMTPCRI-GTLLGTVIVKVACGYV 297
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS--GGSACTMLN 246
LA++D+G ++ WG + YGQ+ S + VL + + R+ D+A+ +
Sbjct: 298 HTLALTDEGQLYVWGGNSYGQLGISNKTNACNPVLVK-HEMGRVSDIAALHYNHTSVAVG 356
Query: 247 DEGLVYSWGY 256
+ G VY WG+
Sbjct: 357 EGGRVYMWGH 366
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 70 IKHLATGRAHTIVITDNEG--------AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
IK A G ++ EG +++G+N + + G G + Y + +
Sbjct: 124 IKMFAYGSGPHVLALTKEGEVRLYLRKVYSWGHNGYCELGNGTCNQGLYPTQ-----VNS 178
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L ++I+D CG H++ L E G++Y+ G GQ G NQ P V + G+++
Sbjct: 179 LGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVNSNLAGKKVA 238
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ +A+ + G+V+GWG + GQ I Q++ R+ + V IV VA G
Sbjct: 239 QIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQMTPCRIGTLLGTV--IVKVACGY 296
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L DEG +Y WG YG LG K + + P L+ +H+ S + +L
Sbjct: 297 VHTLALTDEGQLYVWGGNSYGQLGISNK-TNACNPVLV------KHEMGRVSDIAALHYN 349
Query: 297 PCTFGAITNFGHLYMWG 313
T A+ G +YMWG
Sbjct: 350 H-TSVAVGEGGRVYMWG 365
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 51/290 (17%)
Query: 70 IKHLATGRA--HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
I HL TG +++T ++ + G+N G G G Y K
Sbjct: 70 ILHLGTGNLGNEALIVTRDKMVYALGSNIAGCLGTGDAHSTLYPKK-------------- 115
Query: 128 MDAVCGQD----------HTLFLTESG-------KVYSCGWGADGQTGLGH--LNNQETP 168
+DA+C +D H L LT+ G KVYS WG +G LG+ N P
Sbjct: 116 VDALCEKDIKMFAYGSGPHVLALTKEGEVRLYLRKVYS--WGHNGYCELGNGTCNQGLYP 173
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCK 227
V + +RIV ++ +A+++ G+++ WG + GQ S PR ++
Sbjct: 174 TQVN-SLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVNSNL 232
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++ +A G ++ L + G VY WGY G LG G V++ M P I TL G
Sbjct: 233 AGKKVAQIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQ-MTPCRI-GTLLG---- 286
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + + G A+T+ G LY+WG N YGQLG+ + P+ V
Sbjct: 287 ---TVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISNKTNACNPVLV 333
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 138/268 (51%), Gaps = 24/268 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+I+ CG H+
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEIIQMACGFKHSA 3333
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
++ GK+++ G G G+ GLG+ +N++ P V +EG+ + ++ ++ LAVS G+
Sbjct: 3334 VVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSADGN 3392
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + STP+ + G+ + V G L +G V+++G
Sbjct: 3393 TVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIG-VKKVCCGTQFSVALTKDGRVFTFGQ 3451
Query: 257 -GLLGQGPKVSRSM-KPTLIPS--TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
L+GQ SR+ +P +P+ F VE ++ G A+T+ G ++ W
Sbjct: 3452 ERLIGQPESRSRNHNRPQQVPALEAFF----------VEDVVVGAEHSLALTSTGEVWAW 3501
Query: 313 GKNQYGQLGLGTVEDQPFP-LKVAVGGQ 339
G N GQLG+G + P L A+ G+
Sbjct: 3502 GSNGDGQLGIGDTNARREPCLVTALQGK 3529
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC- 189
+CGQ+ T + +G V +CG G+ G+ G G+ ++ ++ ++G + +L ++
Sbjct: 3219 ICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISA-LQGFVVTQLVTSCGSD 3277
Query: 190 --VLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A+++ G+VF WG+ +YG++ S+ Q PR + +G I+ +A G ++
Sbjct: 3278 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQG-EEIIQMACGFKHSAVV 3335
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC---- 298
+ +G ++++G YG LG G ++ IP + + +E + G
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKK-----IPERV---------TALEGQMVGQVGCGL 3381
Query: 299 --TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T + ++ +G YG+LGLG + P +V
Sbjct: 3382 NHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRV 3419
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN----IADLEGE 125
+K + G ++ +T + FTFG R I Q E HN + LE
Sbjct: 3427 VKKVCCGTQFSVALTKDGRVFTFGQE------RLIGQPESRSRN---HNRPQQVPALEAF 3477
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ D V G +H+L LT +G+V++ G DGQ G+G N + PCLV
Sbjct: 3478 FVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPCLV 3523
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYSWG- 255
+ + WG +GQ++E+ + TP V +I+ G CT ++ G V + G
Sbjct: 3184 EAYMWGGGRHGQLAETGRSLLTPTVTPSFSQAQQII----CGQNCTFVIQANGTVQACGE 3239
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHLY 310
YG LGQG S + I S L G V L+ + G A+T G ++
Sbjct: 3240 GSYGRLGQG--NSDDLHQLTIISALQG-------FVVTQLVTSCGSDGHSMALTESGEVF 3290
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKV 334
WG YG+LG G + Q P ++
Sbjct: 3291 SWGDGDYGKLGHGNSDRQRRPRQI 3314
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI +++ + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTTDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + + +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNQLLINHR-SPQRVLGIPDKVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 38/332 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D H I
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT-----FHQIGFFTPSD 178
Query: 127 IMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I+ + G + + LTE GK++ G ++GQ G L N+ C+ G+ I +S
Sbjct: 179 IIKQLSAGANTSAALTEDGKLFMWGDNSEGQIG---LKNKSNVCIPHEVTVGKPISWISC 235
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ G+++ +G E G++ + R + G+ +++ VA GG +
Sbjct: 236 GYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQVACGGGHTVV 295
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 296 LT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRI--------KDQKISHISCGENHTA 346
Query: 302 AITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T+ G +Y +G ++G+LGLG +Q FP
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P +L+++ R P V
Sbjct: 230 ISWISCGYYHSAFVTT--DGELYTFGEPENG----------KLGLPNQLLINH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPDKVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IDRIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
+KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 332 DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R T F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD--------TFHQIGFFTPSDIIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVG 227
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG S +I
Sbjct: 282 KVIQVACGGGHTVVLTEK-----VVYAFGLGQFGQLGL-------GTFLFETSEPKIIDR 329
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF---CHNI 119
+K +I H++ G HT ++TD +TFG+ G+ G G+ E++ ++F C N
Sbjct: 330 IK--DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGM---ENFTNQFFPTLCSNF 384
Query: 120 ADLEGEKIMDAVCGQDHTLFL 140
+ I CG H L
Sbjct: 385 LKFTVQLI---ACGGCHMLVF 402
>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
Length = 464
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 68 TQIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
Q++ + +G AH+++IT +++G N GQ G G + + I L E
Sbjct: 90 VQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAP-----KLIEVLGSE 144
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I+ A CG++HTL LTE+G VY+ G GQ GLG+ P + G+ I K++
Sbjct: 145 AIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGN-QTDAVPSPTQIMYNGQPITKMAC 203
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------- 233
+ + + KG+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 204 GAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKD 263
Query: 234 ------------DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
DVA G + +L+ + V+SWG+G G G K ++P L
Sbjct: 264 GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKL 320
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 321 FDFPGRGAAQIYAGYTCSF-AVSETGGLFFWG 351
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 122/294 (41%), Gaps = 48/294 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ACG T+ T++ ++ G N QLG GN + V S P +
Sbjct: 146 IVLAACGRNHTLALTETGS----VYAFGENKMGQLGL------GNQTDAVPS----PTQI 191
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFC 116
+ I +A G ++++ ++FG +GQ G Q +Y +
Sbjct: 192 MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVP 251
Query: 117 HNIAD-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
+A +E K + D CG +HTL L +V+S G+G G+ G +
Sbjct: 252 RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 311
Query: 165 QETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ P LV+ + G ++ + C AVS+ G +F WG + + ES M P+ +
Sbjct: 312 EMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGATNTSR--ESTMY---PKAV 366
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQG---PKVSRSMK 270
G +I +A G S+ + DE + SWG +G LG G PK S + +
Sbjct: 367 QDLCGW-KIRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQ 418
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG +E GQ+ + + L + G IV A G + L + G
Sbjct: 105 LLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTETGS 164
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF-GHL 309
VY++G +GQ + + +PS + P +K +A F I + G+L
Sbjct: 165 VYAFGENKMGQ---LGLGNQTDAVPSPTQIMYNGQPITK----MACGAEFSMIMDCKGNL 217
Query: 310 YMWGKNQYGQLG 321
Y +G +YGQLG
Sbjct: 218 YSFGCPEYGQLG 229
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 278 LFGQHQFNPKS--KVESLIAGPCTFGA--ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
L+G H++ S +V S+++GPC + IT G L+ WG+N+ GQLG G + P
Sbjct: 78 LWGPHRYGCLSGVQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKL 137
Query: 334 VAVGGQK 340
+ V G +
Sbjct: 138 IEVLGSE 144
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 226 CKGVSRIVDVASGGSAC--TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFG 280
C ++ V SG A ++ EG ++SWG G LG G R P LI + G
Sbjct: 86 CLSGVQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHG-DTKRVEAPKLI--EVLG 142
Query: 281 QHQFNPKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAV 336
E+++ C A+T G +Y +G+N+ GQLGLG D P P ++
Sbjct: 143 S---------EAIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQTDAVPSPTQIMY 193
Query: 337 GGQ 339
GQ
Sbjct: 194 NGQ 196
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 132/292 (45%), Gaps = 40/292 (13%)
Query: 61 LPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE----DYQGKWF 115
LP +P+ I+ A G H++ ++ FT+G FG G + E +G W
Sbjct: 132 LPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSW- 190
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG---ADGQTGLGHL--NNQETPCL 170
KI HT +TESG++Y+ WG DG+ GLG N+
Sbjct: 191 --------NAKIRHIATAGTHTAAITESGELYT--WGRDQGDGRLGLGPNCGPNEGGGLS 240
Query: 171 VRGEIEGERIVKLSSAVDC----VLAVSDKGDVFGWG-NSEYGQISESEMQISTPRVLSQ 225
+ +++ + +AV C + ++ +G ++ WG NS Y ++ P+ +
Sbjct: 241 IPSKVKALPVPV--AAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS 298
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQ 283
+ V RI+ +ASGG L D+G V SWGYG GQ + PT+I L +H
Sbjct: 299 LQDV-RIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVI-EALADEH- 355
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GTVEDQPFPLKV 334
V + G + AIT+ G LYMWG + QLG+ G E QP P++V
Sbjct: 356 ------VIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEV 401
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+ IP VK + ++ G T+V+T + +G NS + GRG D G W
Sbjct: 239 LSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRG-----DKVGGWKP 293
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
I L+ +I+ G H+L LT+ GKV S G+G GQ G + NQ+ P ++ +
Sbjct: 294 QPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEA-LA 352
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E ++ ++ A++D G ++ WGN++ Q+
Sbjct: 353 DEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQL 386
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
+L+ G HT V+T N + FG+N++GQ G G + D + K C + L+ EK+ A
Sbjct: 39 YLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG--SKSDVK-KPTC--VKALKPEKVQFAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL LT G VY+ G +GQ GLG + T + I +LS+ +
Sbjct: 94 CGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-------------------- 230
A+S+ G +F WG++ GQI ++ + + P ++ K +S
Sbjct: 154 ALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYT 213
Query: 231 ------------------------------RIVDVASGGSACTMLNDEGLVYSWG---YG 257
+++ VA GG +L E VY++G +G
Sbjct: 214 FGEPESGKLGLPKELLINHRTPQLVAGIPEKVIQVACGGGHTVVLT-EKAVYTFGLGQFG 272
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G +++P +I K+ + G I++ G +Y +G ++
Sbjct: 273 QLGLGTFCFETLEPKVIEQI--------KNQKITYISCGENHTALISDIGLMYTFGDGRH 324
Query: 318 GQLGLG--TVEDQPFPL 332
G+LGLG +Q FP+
Sbjct: 325 GKLGLGLENFSNQFFPI 341
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPR--KKGNPLELVMSFVRIPL 61
I+ I+CGY + T D L FG +P K G P EL+++ R P
Sbjct: 192 ISWISCGYYHSAFVTM--DGELYTFG------------EPESGKLGLPKELLINH-RTPQ 236
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
V ++ +A G HT+V+T+ + +TFG FGQ G G E + K I
Sbjct: 237 LVAGIPEKVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFCFETLEPKV----IEQ 291
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCL 170
++ +KI CG++HT +++ G +Y+ G G G+ GLG + +NQ P L
Sbjct: 292 IKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPIL 342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G NS+ Q+G +D V+S V +P V + I ++ G H+ +T
Sbjct: 160 RLFMWGDNSEGQIGLND----------VIS-VCVPHQV-NIGKPISWISCGYYHSAFVTM 207
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +TFG G+ G +++ I EK++ CG HT+ LTE
Sbjct: 208 DGELYTFGEPESGKLGLPKELLINHRTPQLVAGIP----EKVIQVACGGGHTVVLTEKA- 262
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY+ G G GQ GLG + V +I+ ++I +S + +SD G ++ +G+
Sbjct: 263 VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFGDG 322
Query: 206 EYGQI 210
+G++
Sbjct: 323 RHGKL 327
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ + P + K ++ A G +
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKP-EKVQFAACGRNH 98
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G VY+ G G LG G R+ T F + ++ L AG
Sbjct: 99 TLILTVVGNVYAAGGNNEGQLGLGDTEERN--------TFHRISFFTSEHNIKQLSAGSN 150
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A++ G L+MWG N GQ+GL V P +V +G
Sbjct: 151 TSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIG 189
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI +++ + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTTDGEL 249
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + + +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNQLLINHR-SPQRVLGIPDKVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 38/332 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D H I
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT-----FHQIGFFTPSD 178
Query: 127 IMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I+ + G + + LTE GK++ G ++GQ G L N+ C+ G+ I +S
Sbjct: 179 IIKQLSAGANTSAALTEDGKLFMWGDNSEGQIG---LKNKSNVCIPHEVTVGKPISWISC 235
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTM 244
V+ G+++ +G E G++ + R + G+ +++ VA GG +
Sbjct: 236 GYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQVACGGGHTVV 295
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 296 LT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRI--------KDQKISHISCGENHTA 346
Query: 302 AITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T+ G +Y +G ++G+LGLG +Q FP
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 32/239 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I+ I+CGY + T D L FG N K G P +L+++ R P V
Sbjct: 230 ISWISCGYYHSAFVTT--DGELYTFGEPENG----------KLGLPNQLLINH-RSPQRV 276
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++
Sbjct: 277 LGIPDKVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IDRIK 331
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIV 181
+KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L + + V
Sbjct: 332 DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFL--KFTV 389
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+L + C + V + G I E+E + +S G I D++ G S
Sbjct: 390 QLIACGGCHMLV--------FATPRLGTIDETEFEEVYEPYMS--TGSLSINDLSPGSS 438
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALK--PEKVKLAACGRN 135
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R T F P ++ L AG
Sbjct: 136 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD--------TFHQIGFFTPSDIIKQLSAGA 187
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVG 227
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG S +I
Sbjct: 282 KVIQVACGGGHTVVLTEK-----VVYAFGLGQFGQLGL-------GTFLFETSEPKIIDR 329
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF---CHNI 119
+K +I H++ G HT ++TD +TFG+ G+ G G+ E++ ++F C N
Sbjct: 330 IK--DQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGM---ENFTNQFFPTLCSNF 384
Query: 120 ADLEGEKIMDAVCGQDHTLFL 140
+ I CG H L
Sbjct: 385 LKFTVQLI---ACGGCHMLVF 402
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 139/323 (43%), Gaps = 37/323 (11%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +I+CG + + K N ++F G NS QLG P + V+ P
Sbjct: 36 VIEISCGEEHSGIVCK----NGRVFCFGKNSFGQLGLGHTENVYKP-----NCVKSLKPD 86
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K +KH+A GR+HTIV T+N + FG+NS GQ G+ + D +
Sbjct: 87 K-----VKHIACGRSHTIVSTENNIVYGFGDNSDGQLGQSVA---DVTHSDVPIEVTRFN 138
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN----NQETPCLVRGEIEGER 179
+ I+ G HT L E+G VY G +D Q GL ++ N P +V +
Sbjct: 139 DKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPIALP--- 195
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ +S V+ GD++ G+ EYG++ LS+ +IV V+ G
Sbjct: 196 VLYVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWS------LSRVDTTEKIVKVSCGA 249
Query: 240 SACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ LND G V+ G GQ + + + L P + + + ++ G
Sbjct: 250 NHTIALNDAGKVFVCGNNDCGQIGLRNVTSQGHLYPCPITNE-------PIVQIVCGQSH 302
Query: 300 FGAITNFGHLYMWGKNQYGQLGL 322
IT G L+M G +YG+LG+
Sbjct: 303 SAFITASGKLFMCGDGKYGKLGI 325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 38/274 (13%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ ++ N F FG NSFGQ G G E Y+ + L+ +K+ C
Sbjct: 39 ISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHT-ENVYKPNC----VKSLKPDKVKHIAC 93
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTG--LGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G+ HT+ TE+ VY G +DGQ G + + + + P V + I++LS+
Sbjct: 94 GRSHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVT-RFNDKNIIQLSAGSYHT 152
Query: 191 LAVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A+ + GDV+ WG++ Q+ + + +S P ++ V + V+ G + +
Sbjct: 153 AALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPIALPV---LYVSCGHTHTAFV 209
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+ G YG LG G L+ + + K+ + G A
Sbjct: 210 TRIGDLYTCGDREYGKLGHG---------------LWSLSRVDTTEKIVKVSCGANHTIA 254
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQ----PFPL 332
+ + G +++ G N GQ+GL V Q P P+
Sbjct: 255 LNDAGKVFVCGNNDCGQIGLRNVTSQGHLYPCPI 288
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 34/278 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG--YHDPRKKGNPLELVMSFVRIP 60
K+ IACG T+V+T +N ++G G NSD QLG D P+E+
Sbjct: 87 KVKHIACGRSHTIVST----ENNIVYGFGDNSDGQLGQSVADVTHSDVPIEV-------- 134
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ I L+ G HT + +N + +G+NS Q G+ +D I
Sbjct: 135 --TRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQL--GLNSMDDDSVNVSVPTIV 190
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGE 178
+ ++ CG HT F+T G +Y+CG G+ G G L+ +T E
Sbjct: 191 PI-ALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWSLSRVDTT---------E 240
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR-IVDVAS 237
+IVK+S + +A++D G VF GN++ GQI +++ L C + IV +
Sbjct: 241 KIVKVSCGANHTIALNDAGKVFVCGNNDCGQIGLR--NVTSQGHLYPCPITNEPIVQIVC 298
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLI 274
G S + G ++ G G G+ G V++ PTL+
Sbjct: 299 GQSHSAFITASGKLFMCGDGKYGKLGIDVNQITTPTLV 336
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 34/250 (13%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
VI + FT+G +SF ++ +F N + +++ CG++H+ +
Sbjct: 6 VIPETGAVFTYGKSSFA---------DNIPSHFFIRN------DPVIEISCGEEHSGIVC 50
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
++G+V+ G + GQ GLGH N P V+ ++ +++ ++ + ++ V+G
Sbjct: 51 KNGRVFCFGKNSFGQLGLGHTENVYKPNCVKS-LKPDKVKHIACGRSHTIVSTENNIVYG 109
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG---- 255
+G++ GQ+ +S ++ V + + I+ +++G L + G VY WG
Sbjct: 110 FGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSD 169
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
GL PT++P L V + G +T G LY G
Sbjct: 170 RQLGLNSMDDDSVNVSVPTIVPIAL----------PVLYVSCGHTHTAFVTRIGDLYTCG 219
Query: 314 KNQYGQLGLG 323
+YG+LG G
Sbjct: 220 DREYGKLGHG 229
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIV 233
I + ++++S + V G VF +G + +GQ+ + + P + K ++
Sbjct: 31 IRNDPVIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKP-DKVK 89
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+A G S + + +VY +G GQ + + + +P + +FN K+ ++ L
Sbjct: 90 HIACGRSHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVT---RFNDKNIIQ-L 145
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ G +Y+WG N QLGL +++D + V
Sbjct: 146 SAGSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSV 186
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQV---TAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
N G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 NGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + V +GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVTAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4128
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG I +++ ++ LAVS G
Sbjct: 4129 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSADGS 4187
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4188 LVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4246
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P L+P L G ++ + G A++ G +Y WG
Sbjct: 4247 DRLIGLPEGRARNHNRPQLVP-VLLGIF-------IDDIAVGAEHTLALSASGEVYAWGS 4298
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4299 NSEGQLGLG 4307
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P +V ++G K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFTRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGT--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMF-TRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+ G+ T VI+ + G S+G+ G G + K ++ K+ +
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVSSSKG 465
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
HTL T G+V+S G G G+ G G+ + Q+ P L++G ++G+ +V +S+ A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAA 525
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG-LV 251
V++ G+++ WG ++G++ + ++ + + K +S + +V+ G S L+ +G V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+S+G G LG G +R KP ++ + Q F K + AG + A+T+ G
Sbjct: 584 WSFGGGDNGKLGHG-DTNRVYKPKVVEAL---QGMFTRK-----VCAGSQSSLALTSTGQ 634
Query: 309 LYMWG 313
+Y WG
Sbjct: 635 VYAWG 639
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 28/279 (10%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+Q + + G+ T VI N G S+G+ G+G +D I+ L+G +
Sbjct: 4008 SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLTVISALQGFVV 4062
Query: 128 MDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
V CG D H++ LTESG+V+S G G G+ G G+ + Q P + ++GE +V++S
Sbjct: 4063 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMS 4121
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
V+ G +F +GN +YG++ + S ++ P ++ +G+ I VA G +
Sbjct: 4122 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGL-HIGQVACGLNH 4178
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
++ +G LV+++G YG LG G ++S + G ++ + G
Sbjct: 4179 TLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG---------IKKVACGT 4229
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T GH+Y +G+++ L G + P V V
Sbjct: 4230 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPV 4268
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
+ L+G G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S GV+ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4222 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QLVPVLLGIFIDD 4276
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L+ SG+VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4277 IAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTA-LQGKNIRQISA 4331
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI TL G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGTLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DVF WG +GQ++E+ + P S S+ V G + ++ G V + G
Sbjct: 3977 KCDVFLWGAGRHGQLAEAGRNVMIP---SGAGSFSQAQQVICGQNCTFVIQANGTVLACG 4033
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4034 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4084
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4085 FSWGDGDYGKLGHGNSDRQRRPRQI 4109
>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
Length = 427
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 65 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHETIVSAACGRNHT 119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 120 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 178
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 291
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 292 SQIYAGYTCSF-AVSEVGGLFFWG 314
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 56 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHETIVSA 112
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 113 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 165
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 166 CGAEFSMIMDCKGNLYSFGCPEYGQLG 192
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 8 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 67
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI E++++ C
Sbjct: 68 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGLSH-----------ETIVSAACG 115
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 116 RNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 159
>gi|340502738|gb|EGR29393.1| rcc1 family hect domain protein, putative [Ichthyophthirius
multifiliis]
Length = 879
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+I VCG+ HT+F+TE GK+YS G G G G G L + P + + ++I++++
Sbjct: 97 QIKKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLIYSDIPKNII-KFNQKKIIQITC 155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS---------QCKGVSRIVD-V 235
LA++D D++ WG GQ+ + S P +S K +IV +
Sbjct: 156 GEFHTLALTDTYDLYSWGRGFEGQLGTGKDCASFPCYVSIFYQKYDYENKKDQKKIVKYI 215
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESL 293
A G ++D+G++Y+WG LGQ G S+S K P ++ FG + + +
Sbjct: 216 ACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSEKYPKIVN---FGNNLKEENILEDKI 272
Query: 294 IAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
I +G A+ G LY WG N GQLG G+++ FP KV
Sbjct: 273 ICVSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQKVV 317
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG------------IVQEEDY 110
+K +I + G HT+ +TD +++G GQ G G Q+ DY
Sbjct: 143 IKFNQKKIIQITCGEFHTLALTDTYDLYSWGRGFEGQLGTGKDCASFPCYVSIFYQKYDY 202
Query: 111 QGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC 169
+ K + +KI+ + CG H+L +++ G +Y+ G GQTG G +++ P
Sbjct: 203 ENK--------KDQKKIVKYIACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSEKYPK 254
Query: 170 LV-------RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS--TP 220
+V I ++I+ +S AV + G+++ WG + GQ+ ++ S
Sbjct: 255 IVNFGNNLKEENILEDKIICVSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQ 314
Query: 221 RVLSQCKG--VSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+V+ G + V G + ++ G ++SWG G LG
Sbjct: 315 KVVKDILGNNIPLFKTVQCGYNNTFAIDINGQLWSWGGGNLGH 357
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCHNIADLEGEKIM 128
L+ G HT ++T N + FG+N++GQ G G I+ K C I L+ EK+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-------KPTC--IKALKPEKVK 90
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A CG++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ +
Sbjct: 91 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN 150
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+++ G +F WG++ GQI E + + P ++ K +S I + G +
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTM 207
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG 301
+G +Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 208 DGELYTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGG 253
Query: 302 AITNFGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 254 HTVVLTEKVVYAFGLGQFGQLGLGT 278
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 40 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 89 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT---- 141
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 198
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 259 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 340
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 195 ISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRVLGI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++ +K
Sbjct: 242 PERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQK 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 297 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 342
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN-DEGL 250
V+ ++ +G++ +GQ+ S+ I P + K V +A+ G T+++ D G
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRNHTLVSTDTGG 107
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R ++ F P ++ L AG T A+T G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGANTSAALTEDG 159
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL + P +V VG
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 189
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCHNIADLEGEKIM 128
L+ G HT ++T N + FG+N++GQ G G I+ K C I L+ EK+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-------KPTC--IKALKPEKVK 90
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A CG++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ +
Sbjct: 91 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN 150
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+++ G +F WG++ GQI E + + P ++ K +S I + G +
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTM 207
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG 301
+G +Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 208 DGELYTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGG 253
Query: 302 AITNFGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 254 HTVVLTEKVVYAFGLGQFGQLGLGT 278
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 40 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 89 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT---- 141
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 198
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 259 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 340
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 195 ISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRVLGI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++ +K
Sbjct: 242 PERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQK 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 297 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 342
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN-DEGL 250
V+ ++ +G++ +GQ+ S+ I P + K V +A+ G T+++ D G
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRNHTLVSTDTGG 107
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R ++ F P ++ L AG T A+T G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGANTSAALTEDG 159
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL + P +V VG
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 189
>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
Length = 1116
Score = 87.4 bits (215), Expect = 9e-15, Method: Composition-based stats.
Identities = 90/326 (27%), Positives = 130/326 (39%), Gaps = 85/326 (26%)
Query: 90 FTFGNNSFGQCGRG------IVQEEDYQGKWFCHNIADLEGE---------------KIM 128
+ +GN+ +GQ G G QE+D Q K H+I + KI
Sbjct: 16 YVWGNDEYGQLGLGHRYNQTSKQEQDLQNK--NHSIISASYDETRKLNIPKSCTFQTKIK 73
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-----------QETPCLVRGEIEG 177
+ CG+DH+ LT G VYS G + G+ +LN TP LV +
Sbjct: 74 EVACGEDHSCLLTLQGHVYSMGSNQFNKLGVKNLNTFQTSPKNGFEYSNTPKLVELLVNY 133
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVS--- 230
E ++ +S + VS G F WG EYGQ+ S+ + + V Q S
Sbjct: 134 E-VISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNESSVFQQGIFPSIVE 192
Query: 231 -------RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK-VSRSMKPTLIPST-- 277
+IV+VA GG L+ G VYS G +G LG G + + PT +PS
Sbjct: 193 FFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDIQYKDIPTRVPSLSN 252
Query: 278 -------------------------LFGQHQFNPKSKVESLI----AGPCTFGAITNFGH 308
+FG + PK ++S I G C A+ G
Sbjct: 253 ITKISSGHHSAALSSSGQLFFWGTGVFGSF-YEPKGVIDSDIIDVSVGGCFGAALDRDGL 311
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N G+LG+G E +P+P V
Sbjct: 312 IWTWGSNSKGELGVGDFEPRPYPYPV 337
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 44/280 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD----PRKKGNPLELVMSFVR 58
KI ++ACG + + T ++ G N ++LG + N E +
Sbjct: 71 KIKEVACGEDHSCLLTLQG----HVYSMGSNQFNKLGVKNLNTFQTSPKNGFEYSNTPKL 126
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQGKWFC 116
+ L V + ++ ++ G HT ++ + +FT+G +GQ G G + Q+ + F
Sbjct: 127 VELLVNY---EVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNESSVFQ 183
Query: 117 HNIADLEGE-------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ--ET 167
I E KI++ CG HTLFL+ +G+VYS G + GQ G+G + Q +
Sbjct: 184 QGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDIQYKDI 243
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
P V I K+SS A+S G +F WG +G E K
Sbjct: 244 PTRVPSL---SNITKISSGHHSA-ALSSSGQLFFWGTGVFGSFYEP-------------K 286
Query: 228 GV--SRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQG 262
GV S I+DV+ GG L+ +GL+++WG G LG G
Sbjct: 287 GVIDSDIIDVSVGGCFGAALDRDGLIWTWGSNSKGELGVG 326
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 198 DVFGWGNSEYGQI-----------SESEMQISTPRVLS-------------QCKGVSRIV 233
+++ WGN EYGQ+ E ++Q ++S C ++I
Sbjct: 14 EIYVWGNDEYGQLGLGHRYNQTSKQEQDLQNKNHSIISASYDETRKLNIPKSCTFQTKIK 73
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPK----- 287
+VA G +L +G VYS G + G K + + + P F ++ PK
Sbjct: 74 EVACGEDHSCLLTLQGHVYSMGSNQFNKLGVKNLNTFQTS--PKNGF-EYSNTPKLVELL 130
Query: 288 --SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
+V S+ G ++ G + WG+ +YGQLGLG + Q
Sbjct: 131 VNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQ 173
>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
Length = 596
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 160/386 (41%), Gaps = 83/386 (21%)
Query: 27 LFGCGLNSDSQLGYH--DPRKKGNPLELVMSFVRIPLPVKHPS-TQIKHLATGRAHTIVI 83
++ G QLG D +++ + V V++PL P + ++ G +H+ I
Sbjct: 177 MYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPLYQGAPDDIHLAVVSAGSSHSASI 236
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
+ +T+G S G+ G G + I L+ +I+ CG +HTL ++E+
Sbjct: 237 SRRGELYTWGLASSGELGHGGWTPIEVSCPRM---ITSLQRTRIVSVSCGANHTLAISET 293
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+++SCG G GQ G GH +++ LV I ER+V +++ +A++ G +F WG
Sbjct: 294 GQLWSCGRGRHGQLGHGHFHDEGLLMLV-DTIRHERVVSVAAGRAHSVALAADGKIFTWG 352
Query: 204 NSEYGQISESE----MQISTPRVLS-------------QCKGVSRIVDVASGGSACTMLN 246
++ GQ+ ++ MQ P+ LS + K +R+ +A+GG +
Sbjct: 353 DASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVT 412
Query: 247 DEGLVYSW-----GYGLLGQGPKVSRSMKPTLIPSTL----------------------- 278
G + ++ G LG G + R M PT +P L
Sbjct: 413 VAGALLAFGSNKHGQARLGTGDTLDR-MIPTEVPLALESEGGQLVRAMQVHCGAQHTLAL 471
Query: 279 -------------------------FGQHQFN--PKSKVESLI---AGPCTFGAITNFGH 308
+H+F+ P K +S++ G AI G
Sbjct: 472 VQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGR 531
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
LY+WG+ GQLGLG ++ P ++
Sbjct: 532 LYVWGRGDCGQLGLGDDRNRWAPKQL 557
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-LVRGEIEGERIVKLSSAVDCV 190
G H+ ++ G++Y+ G + G+ G G E C + ++ RIV +S +
Sbjct: 228 AGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQRTRIVSVSCGANHT 287
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
LA+S+ G ++ G +GQ+ +L R+V VA+G + L +G
Sbjct: 288 LAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAHSVALAADGK 347
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTL-FGQH-------QFNPKSKVESLIAGPCT 299
+++WG G LG + P P ++ F Q + P ++V ++ AG
Sbjct: 348 IFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGGDH 407
Query: 300 FGAITNFGHLYMWGKNQYGQ--LGLGTVEDQPFPLKVAV 336
A+T G L +G N++GQ LG G D+ P +V +
Sbjct: 408 SMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPL 446
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 33/213 (15%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV--DCVLAV---------- 193
+Y+ G G GQ GL +NQE P V G +E + V L D LAV
Sbjct: 177 MYAMGRGFHGQLGLEQFDNQEQPQRV-GAVERDVKVPLYQGAPDDIHLAVVSAGSSHSAS 235
Query: 194 -SDKGDVFGWGNSEYGQISE---SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
S +G+++ WG + G++ + +++S PR+++ + +RIV V+ G + +++ G
Sbjct: 236 ISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQ-RTRIVSVSCGANHTLAISETG 294
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
++S G +G LG G + ++ T+ +H+ +V S+ AG A+
Sbjct: 295 QLWSCGRGRHGQLGHGHFHDEGL--LMLVDTI--RHE-----RVVSVAAGRAHSVALAAD 345
Query: 307 GHLYMWGKNQYGQLG---LGTVEDQPFPLKVAV 336
G ++ WG GQLG L V P P +++
Sbjct: 346 GKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSI 378
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++T IA G ++ T + L FG + ++LG D + P E +PL
Sbjct: 397 RVTAIAAGGDHSMAVTVAG--ALLAFGSNKHGQARLGTGDTLDRMIPTE-------VPLA 447
Query: 63 VKHPSTQI---KHLATGRAHTIVITDNEG---AFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
++ Q+ + G HT+ + +G + G NS+G+ G G D +
Sbjct: 448 LESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLG-----DRLERHRF 502
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
H I L+G+ I+ G H + + G++Y G G GQ GLG N+ P
Sbjct: 503 HPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAP 554
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---SQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++ + LGH + P L+ E++ I+++ LA+SD G V WG+++ GQ
Sbjct: 65 --GSNDYSQLGHDLPTKRPLLI-PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQ 121
Query: 210 I---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ----G 262
+ ++ E+ + P+V+ Q +V +A G + L G +YSWG + GQ
Sbjct: 122 LGHATDKEI-VQLPKVVRQLV-TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
P L +TL G + ++ G I+ G ++ WG+N GQLGL
Sbjct: 180 PNDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Query: 323 GTVEDQPFPLKV 334
++ +P ++
Sbjct: 233 NDETNRSYPTQL 244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T + G+N + Q G + + I +L+
Sbjct: 38 PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL-------IPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I+ CG H+L L++ G+V S WG + LGH ++E P +VR ++ + +V+
Sbjct: 91 VIIQICCGSRHSLALSDWGQVLS--WGDNDCGQLGHATDKEIVQLPKVVR-QLVTKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P L+ C R+
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPNDLTHCNYPLRLTTLLGIPLAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +RS L G V
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 37/299 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN---PLELVMSFVRIP 60
+ IACG ++ T + L+ G N QLG + P + PL L + + IP
Sbjct: 145 VVQIACGNNHSLALTSCGE----LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIP 199
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L +A G H+ +I+ + F +G N+ GQ G D + + +
Sbjct: 200 LAA---------IACGGNHSFLISKSGAVFGWGRNNCGQLGLN-----DETNRSYPTQLK 245
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L + CG + ++FLT G V++CG GA GQ G G +N+ P +V E+ G I
Sbjct: 246 TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMGSTI 304
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASG 238
+++ LA V +G V+ +G GQ+ + S + P+V+ V+
Sbjct: 305 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPW-------VSPS 357
Query: 239 GSACTMLNDE--GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
GSA ND LV + G V+ ++ +P F +NPKS++ +L A
Sbjct: 358 GSALLQSNDSQVSLVIRQIFS-GGDQSIVTTTLFVDKVPPEDF--RNYNPKSQILTLTA 413
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 52/313 (16%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L+ G+N Q+G + + P +++ V + L G ++ IT +
Sbjct: 760 LYMWGVNDFGQIGDGTTKNRYKPTKILDHVVSVSL--------------GDYYSGAITQD 805
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +G+N +GQ G G ++ K H IA G H+ +T+ G +
Sbjct: 806 GSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIA---------VSLGYCHSGAITQDGSL 856
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y G GQ G G ++ P + + ++ +S V A++ G ++ WG++
Sbjct: 857 YMWGSNDSGQIGDGTTEDRYKPTKIL-----DHVIAVSLGVSHSGAITQDGSLYMWGSNS 911
Query: 207 YGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
G I + +E++ ++L VS + +G S + +G +Y WG YG +G
Sbjct: 912 RGGIGDGTTEVRYKPTKILDHVIAVS----LQTGNSGA--ITQDGSLYMWGSNVYGEIGD 965
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + R KPT I V ++ G GAIT G LYMWG+N YG++G
Sbjct: 966 GTEEDR-YKPTKILD------------HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIG 1012
Query: 322 LGTVEDQPFPLKV 334
GT ED+ P K+
Sbjct: 1013 DGTEEDRYKPTKI 1025
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
++ G ++ WG +++GQI + +T K + +V V+ G + +G +Y
Sbjct: 754 IAQDGSLYMWGVNDFGQIGDG----TTKNRYKPTKILDHVVSVSLGDYYSGAITQDGSLY 809
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WG YG +G G R KPT I V ++ G C GAIT G L
Sbjct: 810 MWGSNVYGQIGDGTTEDR-YKPTKILD------------HVIAVSLGYCHSGAITQDGSL 856
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
YMWG N GQ+G GT ED+ P K+
Sbjct: 857 YMWGSNDSGQIGDGTTEDRYKPTKI 881
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 213 SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSM 269
SE QI+T R S+++ + G ++ +G +Y WG +G +G G +R
Sbjct: 724 SENQINTIRPDVGINSYSQVLSL--GDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNR-Y 780
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
KPT I V S+ G GAIT G LYMWG N YGQ+G GT ED+
Sbjct: 781 KPTKILD------------HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDGTTEDRY 828
Query: 330 FPLKV 334
P K+
Sbjct: 829 KPTKI 833
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 126/310 (40%), Gaps = 20/310 (6%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
+ G N+D +LG + G+ + L++S +P V I + G H++ + N
Sbjct: 123 YAWGRNTDGRLG--NGTSTGSSVPLLVSAGAVPSGVT-----ISQVMAGGFHSLAVGSNG 175
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+++G N GQ G G K + G G H+L + +GK Y
Sbjct: 176 DIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP--AGVTFSQVSAGDRHSLAIGSNGKTY 233
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+ G GQ G+G ++ P LV G ++S+ LAV G + WGN++
Sbjct: 234 AWGEARGGQLGIGSISRTPAPALVSAP-AGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDS 292
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKV 265
GQ+ + S VL G + V++G + +G Y+WG + GQ +
Sbjct: 293 GQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTI 352
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ S P ++ + + SL A + Y WG N +GQLG GT
Sbjct: 353 TTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDE--------NTYTWGANSFGQLGNGTS 404
Query: 326 EDQPFPLKVA 335
+ P+ ++
Sbjct: 405 DGSLVPVAIS 414
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 13/220 (5%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G G +H+L + G +Y+ G+ + GQ G + N P LV +G
Sbjct: 46 LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVS-TPDGVTFT 104
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR---IVDVASG 238
++S+ D LAV G+ + WG + G++ S+ +L V I V +G
Sbjct: 105 QVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAG 164
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G + G +YSWGY G LG G ++ S+ + + F+ S A
Sbjct: 165 GFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVS------A 218
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G AI + G Y WG+ + GQLG+G++ P P V+
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVS 258
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 112/279 (40%), Gaps = 24/279 (8%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ G H++ + + + +G NS GQ G + ++ +G
Sbjct: 47 PGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVL-----VSTPDGV 101
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEI-EGERIVKL 183
G DH+L + G Y+ G DG+ G G P LV G + G I ++
Sbjct: 102 TFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQV 161
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCK---GVSRIVDVASGG 239
+ LAV GD++ WG + GQ+ + + + S P +S GV+ V++G
Sbjct: 162 MAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVT-FSQVSAGD 220
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G Y+WG G LG G +SR+ P L+ + + SL
Sbjct: 221 RHSLAIGSNGKTYAWGEARGGQLGIG-SISRTPAPALVSAPAGVSFTQVSAGDLHSL--- 276
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ + G Y WG N GQLG T P+ V+
Sbjct: 277 -----AVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVS 310
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGV 229
V G + G ++S+ ++ LA+ G+++ WG + GQ+ + S + S P ++S GV
Sbjct: 42 VSGVLPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV 101
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+ V++G + +G Y+WG G LG G S+ P L+ +
Sbjct: 102 T-FTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSV-PLLVSA-----GAVPS 154
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ ++AG A+ + G +Y WG N+ GQLG GT PLKV+ G
Sbjct: 155 GVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAG 205
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +G+V E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISPNLQGVVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGANTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V +AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQV---VAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CG N+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGANTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G ++ ED I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG--LMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ + A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQ-------IGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + V +GG+ L
Sbjct: 148 HCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVVAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
Length = 488
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 126 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 180
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 181 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 239
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 240 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 299
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 300 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 352
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 353 SQIYAGYTCSF-AVSEVGGLFFWG 375
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 117 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 173
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 174 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 226
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 227 CGAEFSMIMDCKGNLYSFGCPEYGQLG 253
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 69 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 128
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 129 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 179
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 180 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 220
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 23/283 (8%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+IKI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 692 IIKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 743
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 744 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVA 795
Query: 121 DLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 796 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 854
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 913
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
G + C L ++ V+SWG Q R KP PS L G
Sbjct: 914 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 954
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 703 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 762
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 763 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 821
Query: 250 LVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 822 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI------------- 867
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 868 --ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 897
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L + C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 642 CEGLANL---GVTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQG-L 687
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
I+K+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 688 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 747
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 748 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 800
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 801 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 837
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
I+ +A S G L G VYSWG G LG G V P P +
Sbjct: 692 IIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 746
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 747 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 795
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 302
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 303 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 361
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 362 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 420
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 421 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 472
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 473 NSEGQLGLGHTNHVREPTLVTV 494
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 29/287 (10%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+P PS +Q + + G+ T VI N G S+G+ G+G +D I
Sbjct: 174 VPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLTVI 228
Query: 120 ADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P + ++
Sbjct: 229 SALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQ 287
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV 233
GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +I
Sbjct: 288 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-QIG 344
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 345 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG--------- 395
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 396 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 442
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 396 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 450
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 451 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT-VLQGKNIRQISA 505
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 151 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 207
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 208 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 258
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 259 FSWGDGDYGKLGHGNSDRQRRPRQI 283
>gi|393202066|ref|YP_006463908.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
gi|327441397|dbj|BAK17762.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
Length = 797
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA---VC 132
G+ H IV+ ++ + +G++S+GQ G I +G ++++
Sbjct: 43 GKNHFIVLKEDGSVWGWGDHSYGQLGANGSNTSS------PIPIQKADGNRLLNIKAIAA 96
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGEIEGERIVKLSSAVDCVL 191
G +HT+ L +G+V++ G GQ G N+ P V G +I+ +S+ L
Sbjct: 97 GSNHTVALDRNGEVWTWGRNNQGQLGYTTANSFSNLPAKVTGITS--KIIAISAGEYHTL 154
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
AV + G V+ WG ++YGQI ++ + V Q GVS I+ VA+G + L +G V
Sbjct: 155 AVDENGQVWAWGRNDYGQIG-TDCNPALAHV--QVCGVSGIIAVAAGDNHSVALKSDGTV 211
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TFGAITNFG 307
++WG G LG G + PT +P S + + AG T +
Sbjct: 212 WAWGRNTVGQLGNGETTDINTNPTAVPGL----------SNIVDISAGANHTLALKQDST 261
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+Y WG N GQLG G +E + P++V
Sbjct: 262 SIYAWGFNSSGQLGDGGLESKLRPIQV 288
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 29/257 (11%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++ I IA G TV + D+N +++ G N+ QLGY SF +P
Sbjct: 88 LLNIKAIAAGSNHTV----ALDRNGEVWTWGRNNQGQLGYTTAN----------SFSNLP 133
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
V +++I ++ G HT+ + +N + +G N +GQ G D +
Sbjct: 134 AKVTGITSKIIAISAGEYHTLAVDENGQVWAWGRNDYGQIGT------DCNPALAHVQVC 187
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGER 179
+ G I+ G +H++ L G V++ G GQ G G + T P V G
Sbjct: 188 GVSG--IIAVAAGDNHSVALKSDGTVWAWGRNTVGQLGNGETTDINTNPTAVPGL---SN 242
Query: 180 IVKLSSAVDCVLAVS-DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
IV +S+ + LA+ D ++ WG + GQ+ + ++ S R + Q +G++++ +A+G
Sbjct: 243 IVDISAGANHTLALKQDSTSIYAWGFNSSGQLGDGGLE-SKLRPI-QVEGMNKVKTIAAG 300
Query: 239 GSACTMLNDEGLVYSWG 255
+ + ++G V++WG
Sbjct: 301 NNHSIAIKEDGTVWTWG 317
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 68 TQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-E 125
+ I ++ G HT+ + D+ + +G NS GQ G G ++ + +EG
Sbjct: 241 SNIVDISAGANHTLALKQDSTSIYAWGFNSSGQLGDGGLESK--------LRPIQVEGMN 292
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
K+ G +H++ + E G V++ G G + +N+ TP V+G I
Sbjct: 293 KVKTIAAGNNHSIAIKEDGTVWTWGRHTSGTS-----SNRSTPIQVKGLSSAIAIGGGGD 347
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
+ +LAV + G V+ W + S+S ++ + Q G+ ++
Sbjct: 348 SDSYILAVKEDGTVWQWDKAS----SDSTTKLP---IFKQVSGIDEVM 388
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4317
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4318 NSEGQLGLGHTNHVREPTLVTV 4339
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P +V ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP ++ + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4240
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4241 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
+ L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4350
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3996 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4052
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4053 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4103
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQI 4128
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---SQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G++ + LGH + P L+ E++ I+++ LA+SD G V WG+++ GQ
Sbjct: 65 --GSNDYSQLGHDLPTKRPLLI-PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQ 121
Query: 210 I---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ----G 262
+ ++ E+ + P+V+ Q +V +A G + L G +YSWG + GQ
Sbjct: 122 LGHATDKEI-VQLPKVVRQLV-TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
P L +TL G + ++ G I+ G ++ WG+N GQLGL
Sbjct: 180 PNDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Query: 323 GTVEDQPFPLKV 334
++ +P ++
Sbjct: 233 NDETNRSYPTQL 244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T + G+N + Q G + + I +L+
Sbjct: 38 PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL-------IPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I+ CG H+L L++ G+V S WG + LGH ++E P +VR ++ + +V+
Sbjct: 91 VIIQICCGSRHSLALSDWGQVLS--WGDNDCGQLGHATDKEIVQLPKVVR-QLVTKTVVQ 147
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P L+ C R+
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPNDLTHCNYPLRLTTLLGIPLAA 202
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +RS L G V
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG---------VR 253
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 254 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 37/299 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN---PLELVMSFVRIP 60
+ IACG ++ T + L+ G N QLG + P + PL L + + IP
Sbjct: 145 VVQIACGNNHSLALTSCGE----LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIP 199
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L +A G H+ +I+ + F +G N+ GQ G D + + +
Sbjct: 200 LAA---------IACGGNHSFLISKSGAVFGWGRNNCGQLGLN-----DETNRSYPTQLK 245
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L + CG + ++FLT G V++CG GA GQ G G +N+ P +V E+ G I
Sbjct: 246 TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMGSTI 304
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASG 238
+++ LA V +G V+ +G GQ+ + S + P+V+ V+
Sbjct: 305 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPW-------VSPS 357
Query: 239 GSACTMLNDE--GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
GSA ND LV + G V+ ++ +P F +NPKS++ +L A
Sbjct: 358 GSALLQSNDSQVSLVIRQIFS-GGDQSIVTTTLFVDKVPPEDF--RNYNPKSQILTLTA 413
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 135/317 (42%), Gaps = 31/317 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L+ G + +LG R EL+ F + I+ +A G HT+V+ ++
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVF---------ENCAIQQVACGGGHTLVLLED 62
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+FG N +GQ G G + +I+ L K++ CG+ H+ L +G V
Sbjct: 63 GCLHSFGYNQYGQLGNGTKVDSPLDAS---RDISSLS-NKLIAVACGRYHSAALDVNGTV 118
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G G +G+ G + PC + R K+ A++D G ++ WG E
Sbjct: 119 FTWGGGKNGRLGHNDEQTRTIPCRI---THLPRAHKIFCGYHITAAITDDG-LYTWGWGE 174
Query: 207 YGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
+GQ+ + ++ S P+ + I +A G C + + G VY+WG +G LG G
Sbjct: 175 HGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIG 234
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
P L+ S L G V + AG A+TN G L+ WG GQ G
Sbjct: 235 RYNEIYSSPVLLTS-LAGM-------MVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGH 286
Query: 323 GTVE--DQPFPLKVAVG 337
G D PF ++ VG
Sbjct: 287 GDYNDCDMPFLVESLVG 303
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 143/344 (41%), Gaps = 52/344 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +ACG G T+V + D L FG N QLG + K +PL+ +
Sbjct: 46 IQQVACGGGHTLVLLE--DGCLHSFG--YNQYGQLG--NGTKVDSPLD-------ASRDI 92
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL- 122
S ++ +A GR H+ + N FT+G G+ G D Q + I L
Sbjct: 93 SSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLG-----HNDEQTRTIPCRITHLP 147
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
KI CG T +T+ G +Y+ GWG GQ G G L + P V + I +
Sbjct: 148 RAHKIF---CGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQ 203
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
L+ L ++ GDV+ WG++E+GQ I S+P +L+ G+ + VA+G
Sbjct: 204 LACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGM-MVTFVAAGDR 262
Query: 241 ACTMLNDEGLVYSWGYGLLGQG----------PKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ + G +++WG G GQ P + S+ I G H F
Sbjct: 263 HSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCG-HNFTV---- 317
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A++ +Y++G N YGQLG G+ P K+
Sbjct: 318 -----------ALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKL 350
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG + + D N +F G + +LG++D + + P + LP
Sbjct: 98 KLIAVACGR----YHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITH------LP 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H + G T ITD +G +T+G GQ G+G + E+ Y K + A+L
Sbjct: 148 RAHK------IFCGYHITAAITD-DGLYTWGWGEHGQLGQGSL-EDSYGPKKVIFDDANL 199
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
I CG H L TESG VY+ G GQ G+G N + ++ + G +
Sbjct: 200 ---AISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTF 256
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSA 241
+++ AV++ G +F WG GQ + P ++ GV I+ V G +
Sbjct: 257 VAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVF-ILKVFCGHNF 315
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IPSTL 278
L+ + +Y +G YG LG G K S L IP T+
Sbjct: 316 TVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTI 358
>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Bos taurus]
Length = 425
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 25/233 (10%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+N + Q G G QG +L +++++ CG H++ L G+V++
Sbjct: 4 YAWGHNGYSQLGNGTTN----QGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAW 59
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G+ GQ G G NQ TP V + +R+V ++ +AV D G+V+GWG + GQ
Sbjct: 60 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 119
Query: 210 --ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
+ + Q++ RV + V++IV G + L DEGL+Y+WG YG LG G
Sbjct: 120 LGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTLALTDEGLLYAWGANTYGQLGTGN 176
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYMWGK 314
K L P+ H K +V + A T A T GH+YMWG+
Sbjct: 177 K-----NNLLSPA-----HIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 219
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G VY+ G Q G G N P V + +++V+++ +A++ G+VF WG
Sbjct: 1 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 60
Query: 204 NSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLL 259
+ GQ+ S S TPR ++ C + R+V +A G ++ + D G VY WGY G L
Sbjct: 61 YNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 120
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G ++ L P + H V ++ G A+T+ G LY WG N YGQ
Sbjct: 121 GLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLLYAWGANTYGQ 171
Query: 320 LGLGTVEDQPFPLKVAVGGQK 340
LG G + P + V ++
Sbjct: 172 LGTGNKNNLLSPAHIMVEKER 192
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 22/164 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ IACG ++ N +++G G N + QLG + + P+ +
Sbjct: 89 RVVGIACGQTSSMAVLD----NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH------ 138
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
S + + G AHT+ +TD + +G N++GQ G G + +
Sbjct: 139 ----SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG------NKNNLLSPAHIMV 188
Query: 123 EGEKIMD-AVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNN 164
E E++++ A C HT T+ G VY G L HL +
Sbjct: 189 EKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTH 232
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 1758
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 1759 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 1817
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 1818 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 1876
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 1877 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 1928
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 1929 NSEGQLGLGHTNHVREPTLVTV 1950
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 29/287 (10%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+P PS +Q + + G+ T VI N G S+G+ G+G +D I
Sbjct: 1630 VPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLTVI 1684
Query: 120 ADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P + ++
Sbjct: 1685 SALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQ 1743
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV 233
GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +I
Sbjct: 1744 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-QIG 1800
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 1801 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG--------- 1851
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 1852 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 1898
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 1852 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 1906
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 1907 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT-VLQGKNVRQISA 1961
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 1607 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 1663
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 1664 EGSYGRLGQG--NSDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 1714
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 1715 FSWGDGDYGKLGHGNSDRQRRPRQI 1739
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 8 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 59
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 60 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 116
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 117 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 175
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 176 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 227
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 228 LSDEKDRESPCHVKL 242
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 40 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 86
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 87 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 139
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 140 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 198
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 199 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 258
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 259 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 310
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 311 LAFVPSSGLIYAFGCGARGQLGTG 334
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 40 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 92
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 93 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 151
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 152 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 209
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 210 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 262
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 292
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 215 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 263
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 264 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 318
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 319 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 347
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 16/239 (6%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+NSF Q G + + C A L G++I+ A CG+ H+L L G V+SC
Sbjct: 3 YCWGDNSFRQLGINAGRRASPRVVR-CREGASLGGQQIVQAACGERHSLLLLADGTVWSC 61
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G + GQ G ++ + P ++ +E + +V +S + LA+ G ++ WG+ GQ
Sbjct: 62 GNNSYGQLGRKNIKKSKRPAPIQA-LETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQ 120
Query: 210 --ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
I E + Q S P+ ++ +I+ V+ G L +G V+SWG +G LG G
Sbjct: 121 LGIKEVKDQCSIPKNIAAL-SRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGTN 179
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
P + ++L G P ++V AG A++ G Y WG+N+ GQL L
Sbjct: 180 FPSQASPQRV-NSLDGI----PLAQVA---AGGSHSFALSLSGTSYGWGRNKEGQLALS 230
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
QI A G H++++ + ++ GNNS+GQ GR +++ I LE + ++
Sbjct: 38 QIVQAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPAP-----IQALETQVVV 92
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG++H+L + ++G++YS G G+ GQ G+ + +Q + + ++I+++S
Sbjct: 93 SVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHY 152
Query: 189 CVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A++ G VF WG++++GQ + + ++P+ ++ G+ + VA+GGS L+
Sbjct: 153 HSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIP-LAQVAAGGSHSFALS 211
Query: 247 DEGLVYSWGYGLLGQ 261
G Y WG GQ
Sbjct: 212 LSGTSYGWGRNKEGQ 226
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 18/189 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIK-HLATGRAHTIVITD 85
++ CG NS QLG + +K + P P++ TQ+ ++ G+ H++ I
Sbjct: 58 VWSCGNNSYGQLGRKNIKKS-----------KRPAPIQALETQVVVSVSCGKEHSLAICK 106
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+++G+ S GQ G V+++ K NIA L +KI+ CG H++ LT+ GK
Sbjct: 107 TGRIYSWGSGSRGQLGIKEVKDQCSIPK----NIAALSRDKIIQVSCGHYHSIALTQDGK 162
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G GQ GLG + +Q +P V ++G + ++++ A+S G +GWG
Sbjct: 163 VFSWGDNDHGQLGLGTNFPSQASPQRV-NSLDGIPLAQVAAGGSHSFALSLSGTSYGWGR 221
Query: 205 SEYGQISES 213
++ GQ++ S
Sbjct: 222 NKEGQLALS 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVR----GEIEGERIVKLSSAVDCVLAVSDKGDVF 200
+Y C WG + LG + + +P +VR + G++IV+ + L + G V+
Sbjct: 1 MYYC-WGDNSFRQLGINAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVW 59
Query: 201 GWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
GN+ YGQ+ ++ S Q +V V+ G + G +YSWG G G
Sbjct: 60 SCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRG 119
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
Q + IP + + K+ + G A+T G ++ WG N +GQL
Sbjct: 120 Q-LGIKEVKDQCSIPKNIAAL----SRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQL 174
Query: 321 GLGT 324
GLGT
Sbjct: 175 GLGT 178
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 200 FGWGNSEYGQISESEMQISTPRVLSQCKGVS----RIVDVASGGSACTMLNDEGLVYSWG 255
+ WG++ + Q+ + + ++PRV+ +G S +IV A G +L +G V+S G
Sbjct: 3 YCWGDNSFRQLGINAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCG 62
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LG+ + +S +P I Q V S+ G AI G +Y W
Sbjct: 63 NNSYGQLGRK-NIKKSKRPAPI--------QALETQVVVSVSCGKEHSLAICKTGRIYSW 113
Query: 313 GKNQYGQLGLGTVEDQ 328
G GQLG+ V+DQ
Sbjct: 114 GSGSRGQLGIKEVKDQ 129
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++CG ++ K+ +++ G S QLG + + + + + + + R
Sbjct: 91 VVSVSCGKEHSLAICKTG----RIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSR----- 141
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+I ++ G H+I +T + F++G+N GQ G G ++ + + L+
Sbjct: 142 ----DKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGT----NFPSQASPQRVNSLD 193
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG 160
G + G H+ L+ SG Y G +GQ L
Sbjct: 194 GIPLAQVAAGGSHSFALSLSGTSYGWGRNKEGQLALS 230
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4132
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4133 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4191
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4192 VVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4250
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4251 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4302
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4303 NSEGQLGLGHTNHVREPTLVTV 4324
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 SLTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLSLTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4002 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4056
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4057 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4115
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4116 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4172
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4173 IGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4225
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4226 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4272
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + ++T+ G +Y WG
Sbjct: 619 VCAGSQSSLSLTSTGQVYAWG 639
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4226 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4280
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4281 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4335
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3981 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4037
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4038 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4088
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4089 FSWGDGDYGKLGHGNSDRQRRPRQI 4113
>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
Length = 507
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 145 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 199
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 200 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 258
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 259 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 318
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 319 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 371
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 372 SQIYAGYTCSF-AVSEVGGLFFWG 394
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 136 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 192
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 193 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 245
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 246 CGAEFSMIMDCKGNLYSFGCPEYGQLG 272
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 88 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 147
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 148 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 198
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 199 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 239
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4145
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4204
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4263
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4315
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTV 4337
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4015 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4069
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4128
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4185
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4186 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4293
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4294 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4348
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3994 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4050
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4051 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQI 4126
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4156
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4157 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4215
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4216 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4274
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4275 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4326
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4327 NSEGQLGLGHTNHVREPTLVTV 4348
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P +V ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP ++ + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4026 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4080
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4081 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4139
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4140 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4196
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4197 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4249
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4250 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4296
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
+ L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4250 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4304
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4305 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4359
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 4005 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4061
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4062 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4112
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4113 FSWGDGDYGKLGHGNSDRQRRPRQI 4137
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 2793
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 2794 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 2852
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 2853 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 2911
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 2912 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 2963
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 2964 NSEGQLGLGHTNHVREPTLVTV 2985
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 2663 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 2717
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 2718 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 2776
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 2777 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 2833
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 2834 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 2886
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 2887 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 2933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 2887 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 2941
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 2942 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 2996
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 2642 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 2698
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 2699 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 2749
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 2750 FSWGDGDYGKLGHGNSDRQRRPRQI 2774
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4317
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4318 NSEGQLGLGHTNHVREPTLVTV 4339
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P +V ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP ++ + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4240
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4241 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
+ L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4350
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3996 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4052
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4053 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4103
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQI 4128
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4142
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4143 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4201
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4202 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4260
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4261 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4312
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4313 NSEGQLGLGHTNHVREPTLVTV 4334
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4012 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4066
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4067 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4125
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4126 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4182
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4183 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4235
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4236 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4282
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4236 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4290
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4291 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4345
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3991 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4047
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4048 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4098
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4099 FSWGDGDYGKLGHGNSDRQRRPRQI 4123
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 26/260 (10%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
M + ++CG+ V +N L+ G++S LG + +P +LV + +
Sbjct: 357 MPDLHHLSCGFEHAAVV-----RNSCLYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDL- 410
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG-IVQEEDYQGKWFCHNI 119
++ ++ GR HT+ +TD G + +G+N++GQ G G ++QE Y I
Sbjct: 411 ------KVKVLSVSCGRKHTLALTD-YGVYAWGSNTYGQLGLGPLIQESPYP-----QII 458
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+L +K++ GQ HT+ L+ SG+VY+ GWG GQ G G +N P L+ + +
Sbjct: 459 TNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIYYPKLLPFQ---HK 515
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDV 235
+V++++ L ++ +G +FG+G++ +GQ+ +S +L + I +
Sbjct: 516 VVQVAAGHAHSLILTREGKLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKI 575
Query: 236 ASGGSACTMLNDEGLVYSWG 255
A+G + + VY+WG
Sbjct: 576 ATGYFHNIAVRADQEVYTWG 595
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-LVRGEIEGE-RIVKLSSAVDC 189
CG +H + S +Y+ G + G GLG L Q +P LV+ + + +++ +S
Sbjct: 365 CGFEHAAVVRNSC-LYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKH 423
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA++D G V+ WG++ YGQ+ + + P++++ ++V V++G L+
Sbjct: 424 TLALTDYG-VYAWGSNTYGQLGLGPLIQESPYPQIITNL-AFKKMVQVSAGQYHTIALSS 481
Query: 248 EGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VY+WG+G+ GQ P L+P QH KV + AG +T
Sbjct: 482 SGEVYTWGWGIHGQLGHGDCDNIYYPKLLP----FQH------KVVQVAAGHAHSLILTR 531
Query: 306 FGHLYMWGKNQYGQL 320
G L+ +G N +GQL
Sbjct: 532 EGKLFGFGSNVFGQL 546
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
G LG GP +++S P L+ Q F+ K KV S+ G A+T++G +Y WG N
Sbjct: 387 GCLGLGPLLTQSSPPKLV------QTLFDLKVKVLSVSCGRKHTLALTDYG-VYAWGSNT 439
Query: 317 YGQLGLG-TVEDQPFP 331
YGQLGLG +++ P+P
Sbjct: 440 YGQLGLGPLIQESPYP 455
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+++ V+ G L D G VY+WG YG LG GP + S P +I + F
Sbjct: 413 KVLSVSCGRKHTLALTDYG-VYAWGSNTYGQLGLGPLIQESPYPQIITNLAF-------- 463
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
K+ + AG A+++ G +Y WG +GQLG G ++ +P
Sbjct: 464 KKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIYYP 507
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4136
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4137 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4195
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4196 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4254
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4255 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4306
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4307 NSEGQLGLGHTNHVREPTLVTV 4328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4006 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4060
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4061 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4119
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4120 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4176
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4177 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4229
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4230 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4276
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4230 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4284
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4285 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4339
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3985 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4041
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4042 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4092
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4093 FSWGDGDYGKLGHGNSDRQRRPRQI 4117
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4317
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4318 NSEGQLGLGHTNHVREPTLVTV 4339
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P +V ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSXCLALRHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+ + +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSXCLALRHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+ G+ T VI+ + G S+G+ G G + K ++ K+ +
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVSSSKG 465
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
HTL T G+V+S G G G+ G G+ + Q+ P L++G ++G+ +V +S+ A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG-LV 251
V++ G+++ WG ++G++ + ++ + + K +S + +V+ G S L+ +G V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+S+G G LG G +R KP ++ + Q F + + AG + A+T+ G
Sbjct: 584 WSFGGGDNGKLGHG-DTNRVYKPKVVEAL---QGMF-----IRKVCAGSQSSLALTSTGQ 634
Query: 309 LYMWG 313
+Y WG
Sbjct: 635 VYAWG 639
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4240
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4241 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
+ L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+ +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4296 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4350
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3996 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4052
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4053 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4103
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQI 4128
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 148/341 (43%), Gaps = 34/341 (9%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ + ++A G GF +A S K L+ G NS SQLG R
Sbjct: 511 LTDVKNVAAG-GFHSLALGSDGK---LWSWGSNSLSQLGVSRDTLGS----------RAS 556
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ + + +A G H++V+ N +G N +GQ G G + +C +
Sbjct: 557 PALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTF----YCSSPT 612
Query: 121 DLEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ I+ GQ+H+L L G V++ G GQ G G L ++ P V R
Sbjct: 613 EPTNLFSILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQV---ARLNR 669
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+V + + + LA+ G V+ WG++ GQ+ + V Q G+S +V VA+GG
Sbjct: 670 VVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPV--QVPGLSGVVAVAAGG 727
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L +G V++WGY G +G G S +P+ + + F+ + V + AG
Sbjct: 728 RHSLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPV------KVLFSSQDVVMGVAAG 781
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVE-DQPFPLKVAV 336
A+ + G + WG+N GQLG T D+ P +V +
Sbjct: 782 DTHSVAVLSGGRVRTWGQNDSGQLGYATNNTDRSTPGEVTL 822
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 114/268 (42%), Gaps = 18/268 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ A G A+T++ D+ +T+G NS GQ G G D ++
Sbjct: 38 ETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYR------LASAPVDFSNGMVV 91
Query: 129 DAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
V G H L + +++ G DGQ G+G + +P V G E + +S
Sbjct: 92 KRVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTF 151
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ +SD G V WG + YGQ+ S S+P +S +S I V+ G L
Sbjct: 152 NSAAVLSD-GKVLTWGYNAYGQLGNGSTTDQSSPVEVSA---LSDIKGVSVGKYHMLALR 207
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G V++WG+ GQ S S P Q V S+ AG A+
Sbjct: 208 SGGTVWAWGFNGSGQLGLGSGSNTQYNTP------QQAAVLKGVASVSAGDSHSLALRWD 261
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG+N GQLG+G+ D+P P++V
Sbjct: 262 GTVWAWGQNNQGQLGIGSFTDRPSPVQV 289
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 44/313 (14%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L+ G N D QLG +P V++P ++ +A ++ + +
Sbjct: 110 LWAWGRNGDGQLGVGSTTSSFSP-------VKVP---GRTGVEVVAMAASTFNSAAVLSD 159
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
T+G N++GQ G G ++ + ++D++G + G+ H L L G V
Sbjct: 160 GKVLTWGYNAYGQLGNGSTTDQSSPVE--VSALSDIKGVSV-----GKYHMLALRSGGTV 212
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G+ GQ GLG +N + + + + + +S+ LA+ G V+ WG +
Sbjct: 213 WAWGFNGSGQLGLGSGSNTQYNTPQQAAVL-KGVASVSAGDSHSLALRWDGTVWAWGQNN 271
Query: 207 YGQI-----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GL 258
GQ+ ++ + PR+ + +V+VA+G L +G V++WG+ G
Sbjct: 272 QGQLGIGSFTDRPSPVQVPRL-------TGVVEVAAGQFHALALRLDGTVWAWGFNGSGQ 324
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G +SRS P +P + V S+ AG A+ + G +Y WG+N G
Sbjct: 325 LGDGTTLSRS-SPVQVPGL----------TGVVSVAAGDGHSVAVLSDGRVYTWGRNSAG 373
Query: 319 QLGLGTVEDQPFP 331
QLG G+ + P P
Sbjct: 374 QLGDGSQDALPHP 386
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 26/270 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G +H + + ++ + +G N GQ G G K + G +++
Sbjct: 91 VKRVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVK-----VPGRTGVEVVA 145
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAV 187
++ + GKV + G+ A GQ G G +Q +P V +I+G + K
Sbjct: 146 MAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYH--- 202
Query: 188 DCVLAVSDKGDVFGWG---NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+LA+ G V+ WG + + G S S Q +TP+ + KGV+ V++G S
Sbjct: 203 --MLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVA---SVSAGDSHSLA 257
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
L +G V++WG GQ S + +P+ + Q + V + AG A+
Sbjct: 258 LRWDGTVWAWGQNNQGQLGIGSFTDRPSPV--------QVPRLTGVVEVAAGQFHALALR 309
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N GQLG GT + P++V
Sbjct: 310 LDGTVWAWGFNGSGQLGDGTTLSRSSPVQV 339
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ L G T+ ++ + +G+N GQ G ++ + +++ +
Sbjct: 461 ETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLG-----DDSTVNRLTPVSVSTASLTDVK 515
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLG----HLNNQETPCLVRGEIEGERIVKLS 184
+ G H+L L GK++S WG++ + LG L ++ +P LV G +
Sbjct: 516 NVAAGGFHSLALGSDGKLWS--WGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGE 573
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSAC 242
+ VL+ G V WG + YGQI + + T S + + I+ VA+G +
Sbjct: 574 THSLVVLS---NGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQNHS 630
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L +G V++WG G LG G V R+ +P Q ++V S++AG
Sbjct: 631 LALRSDGTVWAWGRNNSGQLGDGSLVDRT-RPV----------QVARLNRVVSVVAGLYH 679
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G ++ WG N GQLG GT Q P++V
Sbjct: 680 SLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQV 714
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 24/151 (15%)
Query: 195 DKGDVFGWGNSEYGQISESEMQ---ISTPRVLSQCKGVSRIVDVASGGS-ACTMLNDEGL 250
D G V+ WG + GQ+ + S P S V R VA+GGS A +L+D+ L
Sbjct: 54 DDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKR---VAAGGSHALAVLSDKTL 110
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--GAITN 305
++WG G LG G S S P +P ++ VE + TF A+ +
Sbjct: 111 -WAWGRNGDGQLGVGSTTS-SFSPVKVPG----------RTGVEVVAMAASTFNSAAVLS 158
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G + WG N YGQLG G+ DQ P++V+
Sbjct: 159 DGKVLTWGYNAYGQLGNGSTTDQSSPVEVSA 189
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C + LE ++ V G TLF GK+++ G GQ G N+ TP V
Sbjct: 454 CSFVCRLETPRL---VAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVS-TA 509
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
+ +++ LA+ G ++ WG++ Q+ S + + + GVS +V V
Sbjct: 510 SLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAV 569
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ-----GPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
A+G + ++ G V +WGY GQ P + P+ LF +
Sbjct: 570 AAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLF---------SI 620
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ AG A+ + G ++ WG+N GQLG G++ D+ P++VA
Sbjct: 621 LGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVA 665
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 30/270 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A GR H + + N + +G N GQ G ++ + +F E ++
Sbjct: 346 VVAVAAGRTHALAMRANNSIWAWGGNVNGQRG------DESRSVYFSPRTILNE---VVT 396
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
DH+L + G +++ G +GQ G G N+ P V G + V +++
Sbjct: 397 MAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLGNV-----VSVAAGRRH 451
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LAV D G ++ WG++ GQ+ + S+ + Q G+S I VA+G L +
Sbjct: 452 SLAVRDDGSLWAWGSNTVGQLGDGTG--SSRTIPMQVPGISGIASVAAGSDYSVALRYDR 509
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+++WG YG LG G V+R +P+ + G S + ++ G A+ +
Sbjct: 510 TLWAWGENSYGQLGDGTTVNRH-----VPTRVQG------LSGIVAIATGNGHMLAVRSN 558
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G ++ WG N GQLG GT ++ P++V V
Sbjct: 559 GTVWAWGDNSSGQLGDGTTINRATPVQVQV 588
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCG 133
+G ++ + + + +G N GQ G G + + ++G + G
Sbjct: 101 SGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRG--------DPVQVQGLSGVTTVALG 152
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H+L L G V++ G GQ G G + TP +V G E +V +++ + LAV
Sbjct: 153 ATHSLALCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQE---VVAVAAGANHSLAV 209
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
G V+ WG + GQ+ + T RV +G+S IV VASG S L +G V++
Sbjct: 210 LSDGTVWAWGENYDGQLGDGTT--VTRRVPVPIQGLSGIVAVASGTSHSLALRYDGNVWA 267
Query: 254 WGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G +SRS P Q S + S+ GP A+ G ++
Sbjct: 268 WGSNYSGQLGDGSSLSRS-SPV----------QVTELSGIVSVEGGPDYSMAVRYDGTVW 316
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKVA 335
WG N YGQLG GT + P++ +
Sbjct: 317 TWGINTYGQLGDGTTIARSVPVQTS 341
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G H++ + + + +G N GQ G G I L G I+
Sbjct: 195 EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRR-----VPVPIQGLSG--IV 247
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G H+L L G V++ G GQ G G ++ +P V E+ G IV + D
Sbjct: 248 AVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVT-ELSG--IVSVEGGPD 304
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+AV G V+ WG + YGQ+ + + + S P Q G+S +V VA+G + +
Sbjct: 305 YSMAVRYDGTVWTWGINTYGQLGDGTTIARSVP---VQTSGLSGVVAVAAGRTHALAMRA 361
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AIT 304
+++WG + GQ SRS+ F+P++ + ++ T A+
Sbjct: 362 NNSIWAWGGNVNGQRGDESRSVY-------------FSPRTILNEVVTMAATNDHSLAVR 408
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G L+ WG N GQLG GT +++ P +V
Sbjct: 409 SDGGLWAWGANNEGQLGDGTTKNRWAPAEV 438
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 46/314 (14%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L+ G N++ QLG + + P E++ + V + A GR H++ + D+
Sbjct: 413 LWAWGANNEGQLGDGTTKNRWAPAEVLGNVVSV--------------AAGRRHSLAVRDD 458
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +G+N+ GQ G G + + G I G D+++ L +
Sbjct: 459 GSLWAWGSNTVGQLGDGTGSSRT-----IPMQVPGISG--IASVAAGSDYSVALRYDRTL 511
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G + GQ G G N+ P V+G + G IV +++ +LAV G V+ WG++
Sbjct: 512 WAWGENSYGQLGDGTTVNRHVPTRVQG-LSG--IVAIATGNGHMLAVRSNGTVWAWGDNS 568
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQG 262
GQ+ + + + +TP Q + +S IV VA+G + + +G +++WG LG G
Sbjct: 569 SGQLGDGTTINRATP---VQVQVLSGIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDG 625
Query: 263 PKVSRSMKPTLIPSTL--FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
+ P L+P+ + G +K SL A+ G L+ WG N YGQL
Sbjct: 626 TGI-----PRLVPTQVQGIGSAVAVSAAKHHSL--------AVLADGTLWDWGANNYGQL 672
Query: 321 GLGTVEDQPFPLKV 334
G P P KV
Sbjct: 673 GRNQDNTNPTPSKV 686
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 145/354 (40%), Gaps = 78/354 (22%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ G N D QLG + R+P+P++ S I +A+G +H++ + +
Sbjct: 215 VWAWGENYDGQLGDGTTVTR-----------RVPVPIQGLS-GIVAVASGTSHSLALRYD 262
Query: 87 EGAFTFGNNSFGQCG----------------RGIVQEE---DYQ---------GKWFCHN 118
+ +G+N GQ G GIV E DY W +
Sbjct: 263 GNVWAWGSNYSGQLGDGSSLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGINT 322
Query: 119 IADL-EGEKIMDAV--------------CGQDHTLFLTESGKVYSCGWGADGQTGLGHLN 163
L +G I +V G+ H L + + +++ G +GQ G +
Sbjct: 323 YGQLGDGTTIARSVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRS 382
Query: 164 NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+P + E+ V +++ D LAV G ++ WG + GQ+ + +T
Sbjct: 383 VYFSPRTILNEV-----VTMAATNDHSLAVRSDGGLWAWGANNEGQLGDG----TTKNRW 433
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFG 280
+ + + +V VA+G + D+G +++WG G LG G SR++ P +P
Sbjct: 434 APAEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTI-PMQVPGI--- 489
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
S + S+ AG A+ L+ WG+N YGQLG GT ++ P +V
Sbjct: 490 -------SGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRV 536
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+V + S D +AV G V+ WG ++ GQ+ + + V Q +G+S + VA G
Sbjct: 96 MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPV--QVQGLSGVTTVALGA 153
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L +G V++WG +G LG G ++R P + G + V ++ AG
Sbjct: 154 THSLALCYDGSVWAWGANDHGQLGDGTSIARR-----TPQMVAGLQE------VVAVAAG 202
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G ++ WG+N GQLG GT + P+ +
Sbjct: 203 ANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPI 240
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 34/268 (12%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+++ A+G H++++ N ++G+NS GQ GR VQ ++ + I LE ++
Sbjct: 23 AELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKR-----IPALETLRV 77
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG++H+L + G+V++ G G++GQ G+G N + +I+++S
Sbjct: 78 DLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGH 137
Query: 188 DCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S+ G +F WG++ +GQ+ E Q S RV G+ + VA+GG+
Sbjct: 138 HHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRV-QFLDGIP-LTQVAAGGAHSFA 195
Query: 245 LNDEGLVYSWG------YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL--IAG 296
L+ G + WG L + V +S KP + + +E+L +
Sbjct: 196 LSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDA-------------LENLGVVYI 242
Query: 297 PCTF---GAITNFGHLYMWGKNQYGQLG 321
C + +T G ++ +G N YGQLG
Sbjct: 243 SCGYEHTAVLTQTGKVFTFGGNSYGQLG 270
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L +G+++S G + GQ G + QE P + +E R+ +
Sbjct: 22 GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPA-LETLRVDLV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QIS-TPRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG GQ+ E +I+ PR + + +I+ V+ G
Sbjct: 81 SCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDI-KIIQVSCGHHH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G +++WG +G LG G + P + QF + + AG
Sbjct: 140 SLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRV--------QFLDGIPLTQVAAGGA 191
Query: 299 TFGAITNFGHLYMWGKNQYGQLGL 322
A++ G + WG N GQL L
Sbjct: 192 HSFALSLSGASFGWGSNSEGQLAL 215
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 20/188 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ ++ +LF G NS QLG G S R+
Sbjct: 128 IKIIQVSCGHHHSLALSEDG----RLFTWGSNSHGQLGL------GKECPSQASPQRVQF 177
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P TQ+ A G AH+ ++ + +F +G+NS GQ Q C ++
Sbjct: 178 LDGIPLTQV---AAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPC-SVDA 233
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
LE ++ CG +HT LT++GKV++ G + GQ G +E P LV G I+G
Sbjct: 234 LENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG-IDG---- 288
Query: 182 KLSSAVDC 189
L S +DC
Sbjct: 289 -LVSQIDC 295
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
L + G++ +G++ +GQ+ ++Q P+ + + + R+ V+ G + +G
Sbjct: 36 LLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETL-RVDLVSCGKEHSLAVCYKG 94
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
V++WG G GQ + + LIP + + K+ + G A++ G L
Sbjct: 95 RVFAWGAGSEGQL-GIGEFNEINLIPRKI----KTLTDIKIIQVSCGHHHSLALSEDGRL 149
Query: 310 YMWGKNQYGQLGLG 323
+ WG N +GQLGLG
Sbjct: 150 FTWGSNSHGQLGLG 163
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4145
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4204
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4263
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4315
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTV 4337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLSLSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G ++++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4069
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4128
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4185
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4186 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S L++S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4293
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4294 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4348
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3994 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 4050
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4051 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQI 4126
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 38/311 (12%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP--LPVKHPSTQIKHLA--TGRA 78
+N K++ CG ++ +LG V V +P LPV H +K +A +G
Sbjct: 3145 QNGKVYACGEGTNGRLGLG-----------VTHNVPLPHQLPVLHQYV-VKKVAVHSGGK 3192
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + +T + F++G G+ G G D + L +KI D CG H+
Sbjct: 3193 HALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-----RLVETLRSKKIRDVACGSSHSA 3247
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDK 196
++ G++Y+ G G G+ G G + Q P LV + G R+++++ S LA+++
Sbjct: 3248 AISSQGELYTWGLGEYGRLGHGDNSTQLKPKLV-AALAGRRVIQVACGSRDAQTLALTED 3306
Query: 197 GDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G VF WG+ ++G++ + S TP + + G+ ++ + G L G V++WG
Sbjct: 3307 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWG 3365
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y LG G KP I + L G+ +V + G A+T+ G +Y W
Sbjct: 3366 KGDYYRLGHGGD-QHVRKPQPI-AGLRGR-------RVIHVAVGALHCLAVTDAGQVYAW 3416
Query: 313 GKNQYGQLGLG 323
G N +GQ G G
Sbjct: 3417 GDNDHGQQGSG 3427
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 20/264 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHT 137
H + I N A+++GN + G G D + I L+ + + AV CG ++
Sbjct: 631 HFMAIDINRNAYSWGNGEDHRLGHG-----DTHARAVPTKITLLD--RCVKAVFCGCSYS 683
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDCVLAVSDK 196
+T SG +Y+ G G + G G+ ++Q P +V E E I V L S L ++ +
Sbjct: 684 AAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSE 743
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
G V+ WG+++YG++ + S VL + + ++ V +G L +G +YSWG
Sbjct: 744 GHVYAWGDADYGKLGNGNLNGSMSPVL--VESLPKVQRVFAGAQFSMALTTDGQLYSWGK 801
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
V RS + +P + G QH+ ++ + G A+++ G ++ WG+N
Sbjct: 802 ASCLGHQLVERSAQWCSVPRLISGLQHK-----RIVDVAVGVAHCLALSSCGEVFGWGRN 856
Query: 316 QYGQLGLGTVEDQPF---PLKVAV 336
Q+ +V +P P+ VA+
Sbjct: 857 DSQQICPSSVSSEPLLRVPILVAL 880
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + +G G+ G G D + K H L G + D CG
Sbjct: 4330 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMNVADIACGS 4384
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 4385 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALL-GYRAIDIACGSGDAQTLC 4443
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ ++ V G L G V
Sbjct: 4444 INDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGAV 4502
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+WG G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 4503 YTWGKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDSGE 4553
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+Y WG N GQLG GTV P VA
Sbjct: 4554 VYTWGDNDEGQLGDGTVTAIQRPRLVAA 4581
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 3235 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNSTQLKP-KLVAALA----- 3284
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 3285 ----GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 3335
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 3336 RLSGIGVIQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPIAG-LRGR 3392
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3393 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3423
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFLT-ESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++GKVY+CG G +G+ GLG +N + P L + ++ V + S
Sbjct: 3133 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKK---VAVHS 3189
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I DVA G S
Sbjct: 3190 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRS-KKIRDVACGSSHSAA 3248
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCT 299
++ +G +Y+WG YG LG G S +KP L+ + L G+ Q S+ +
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGDN-STQLKPKLV-AALAGRRVIQVACGSRDAQTL----- 3301
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 3302 --ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3334
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 25/257 (9%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G D +LG+ D + P ++ + +K + G +++
Sbjct: 636 DINRNAYSWGNGEDHRLGHGDTHARAVPTKITLL-----------DRCVKAVFCGCSYSA 684
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ--DHTLF 139
IT + +T+G ++ + G G ++ + L +I+D G H+L
Sbjct: 685 AITCSGNLYTWGRGTYARLGHGNSDDQPLPTV-----VMALTEHEIIDVALGSGDAHSLC 739
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G VY+ G G+ G G+LN +P LV + +R+ + +A++ G +
Sbjct: 740 LTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQRVF---AGAQFSMALTTDGQL 796
Query: 200 FGWGNSE---YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + + + S S PR++S + RIVDVA G + C L+ G V+ WG
Sbjct: 797 YSWGKASCLGHQLVERSAQWCSVPRLISGLQH-KRIVDVAVGVAHCLALSSCGEVFGWGR 855
Query: 257 GLLGQGPKVSRSMKPTL 273
Q S S +P L
Sbjct: 856 NDSQQICPSSVSSEPLL 872
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 4240 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 4296
Query: 206 EYGQISESEMQI-STPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
G++ + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 4297 SGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4356
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ L G + V + G AIT GH+ WGK +YG+L
Sbjct: 4357 HGNRMSYD-RPKLV-EHLNGMN-------VADIACGSAHSAAITASGHVLTWGKGRYGRL 4407
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 4408 GHGDSEDQLRP 4418
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 78/195 (40%), Gaps = 32/195 (16%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
C H + + + YS G G D + G G + + P +I L V V
Sbjct: 627 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPT---------KITLLDRCVKAVF 677
Query: 192 -------AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA--SGGSAC 242
A++ G+++ WG Y ++ + I+DVA SG +
Sbjct: 678 CGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHS 737
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L EG VY+WG YG LG G ++ SM P L+ S KV+ + AG
Sbjct: 738 LCLTSEGHVYAWGDADYGKLGNG-NLNGSMSPVLVESL----------PKVQRVFAGAQF 786
Query: 300 FGAITNFGHLYMWGK 314
A+T G LY WGK
Sbjct: 787 SMALTTDGQLYSWGK 801
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 33/246 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG ++ T S + L+ G + ++LG+ + + P +VM+
Sbjct: 673 VKAVFCGCSYSAAITCSGN----LYTWGRGTYARLGHGNSDDQPLP-TVVMALT------ 721
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+H + L +G AH++ +T + +G+ +G+ G G + G + L
Sbjct: 722 EHEIIDVA-LGSGDAHSLCLTSEGHVYAWGDADYGKLGNG-----NLNGSMSPVLVESLP 775
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET------PCLVRGEIEG 177
K+ G ++ LT G++YS WG + LGH + + P L+ G ++
Sbjct: 776 --KVQRVFAGAQFSMALTTDGQLYS--WGK--ASCLGHQLVERSAQWCSVPRLISG-LQH 828
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+RIV ++ V LA+S G+VFGWG ++ QI S + S P L + + + + +
Sbjct: 829 KRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPSSVS-SEP--LLRVPILVALPTLPA 885
Query: 238 GGSACT 243
G ACT
Sbjct: 886 SGVACT 891
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G F + G G V K +A L+G+KI+ G
Sbjct: 4489 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK-----VAALQGKKIISIATGSL 4543
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + ++SG+VY+ G +GQ G G + + P LV ++G+ IVK++ LA+S
Sbjct: 4544 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV-AALQGKHIVKVTCGSAHTLALS 4601
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 36/203 (17%)
Query: 145 KVYSCGW--------GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
+VY+ GW G + + L ++ + L+ + + ++IV S VL +S+
Sbjct: 538 RVYALGWPSLSKEQHGFNAEPALSWSSDPSSLPLLNCKFQVQQIVCSES---IVLILSED 594
Query: 197 GDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG--GSACTMLNDEGLVYSW 254
G ++ W ++ + E + P++L + + IV +AS G ++ YSW
Sbjct: 595 GKLYNW------RMFKPETE---PQLLEEIAHET-IVSIASHCEGRHFMAIDINRNAYSW 644
Query: 255 GYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G +R++ PT I TL + V+++ G AIT G+LY
Sbjct: 645 GNGEDHRLGHGDTHARAV-PTKI--TLLDR-------CVKAVFCGCSYSAAITCSGNLYT 694
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
WG+ Y +LG G +DQP P V
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVV 717
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ VC + L L+E GK+Y+ W + ET + EI E IV ++S
Sbjct: 577 QVQQIVCSESIVLILSEDGKLYN--W---------RMFKPETEPQLLEEIAHETIVSIAS 625
Query: 186 AVD--CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-VASGGSAC 242
+ +A+ + + WGN E ++ + V ++ + R V V G S
Sbjct: 626 HCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARA--VPTKITLLDRCVKAVFCGCSYS 683
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ G +Y+WG Y LG G + + PT++ + +H+ + L +G
Sbjct: 684 AAITCSGNLYTWGRGTYARLGHGNSDDQPL-PTVVMA--LTEHEIIDVA----LGSGDAH 736
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ GH+Y WG YG+LG G + P+ V
Sbjct: 737 SLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLV 771
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + + I R + ++ + V G V+ G G+
Sbjct: 3100 WGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGR 3159
Query: 210 ISESEMQ-ISTPRVLSQC-KGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPK 264
+ + P L + V + V V SGG L +G V+SWG G LG G +
Sbjct: 3160 LGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR 3219
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ KP L+ TL + K+ + G AI++ G LY WG +YG+LG G
Sbjct: 3220 TTLD-KPRLV-ETLRSK-------KIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD 3270
Query: 325 VEDQPFP-LKVAVGGQK 340
Q P L A+ G++
Sbjct: 3271 NSTQLKPKLVAALAGRR 3287
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG F+V TKS ++ G +LG+ + VR P V
Sbjct: 4483 VIKVECGSQFSVALTKSG----AVYTWGKGDFHRLGHGS-----------VDHVRRPKKV 4527
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+I +ATG H + +D+ +T+G+N GQ G G V +A L
Sbjct: 4528 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP-----RLVAAL 4582
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
+G+ I+ CG HTL L+ S
Sbjct: 4583 QGKHIVKVTCGSAHTLALSTS 4603
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 4227 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 4283
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 4284 VTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 4337
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 4338 LTTEGEVYAWGEGEDGKLGHG 4358
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVIQMSCGFKHSA 4076
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4077 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4135
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4136 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4194
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4195 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDIAVGAEHTLALASTGDVYAWGS 4246
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4247 NSEGQLGLG 4255
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 3946 VMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4000
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4001 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4059
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE ++++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4060 LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4116
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4117 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4169
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4170 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4216
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S GV+ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4170 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4224
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P L+ ++G+ I ++S+
Sbjct: 4225 IAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLI-TILQGKNIRQISA 4279
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
Length = 655
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 293 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 347
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 348 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 406
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 407 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 466
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 467 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 519
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 520 SQIYAGYTCSF-AVSEVGGLFFWG 542
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 284 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 340
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 341 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 393
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 394 CGAEFSMIMDCKGNLYSFGCPEYGQLG 420
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 236 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 295
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 296 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 346
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 347 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 387
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4139
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4140 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4198
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4199 VVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4257
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4258 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4309
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4310 NSEGQLGLGHTNHVREPTLVTV 4331
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 SLTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLSLTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4009 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4063
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4064 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4122
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4123 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4179
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4180 IGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4232
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4233 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + ++T+ G +Y WG
Sbjct: 619 VCAGSQSSLSLTSTGQVYAWG 639
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4233 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4287
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4288 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3988 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4044
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4045 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4095
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4096 FSWGDGDYGKLGHGNSDRQRRPRQI 4120
>gi|345788246|ref|XP_003433049.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
nucleotide exchange factor [Canis lupus familiaris]
Length = 461
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I+ + G H+ V+TD F G N GQ G G ++ Y + L G I
Sbjct: 49 IRRITGGGGHSAVVTDGGSLFVCGLNKDGQLGLGHTEDVLY-----FTSCRSLLGCPIQQ 103
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAV 187
CG D T+ LTESG+V SCG + GQ G+ + C+V IE ER+V +++ +
Sbjct: 104 VACGWDFTIILTESGQVLSCGSNSFGQLGVPQGPRR---CVVPQAIELLRERVVCVAAGL 160
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS---QCKGVSRIVDVASGGSACTM 244
LA + G VF WG ++ S ++ + L K SR+ + + + C +
Sbjct: 161 RHALAATASGTVFQWGTG----LASSGRRLCPGQTLPPFLTAKEPSRVTGLENSKATCVL 216
Query: 245 --------LNDEGLVYSWGYGLLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIA 295
L D G +Y WG GQ ++ + KP I + F KV S+ +
Sbjct: 217 AGSDHSASLTDAGELYVWGSNKHGQLASLAAFLPKPQKIEAHCF------QNEKVTSVWS 270
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLG 321
G A T G ++ WG+ YGQLG
Sbjct: 271 GWTHLVAQTETGKVFTWGRADYGQLG 296
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 144/341 (42%), Gaps = 43/341 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I G G + V T LF CGLN D QLG E V+ F +
Sbjct: 49 IRRITGGGGHSAVVTDGGS----LFVCGLNKDGQLGL-------GHTEDVLYFTSCRSLL 97
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC--HNIAD 121
P I+ +A G TI++T++ + G+NSFGQ G QG C +
Sbjct: 98 GCP---IQQVACGWDFTIILTESGQVLSCGSNSFGQLGV-------PQGPRRCVVPQAIE 147
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L E+++ G H L T SG V+ G G +G Q P + + E R+
Sbjct: 148 LLRERVVCVAAGLRHALAATASGTVFQWGTGL-ASSGRRLCPGQTLPPFLTAK-EPSRVT 205
Query: 182 KL-SSAVDCVLA-------VSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRI 232
L +S CVLA ++D G+++ WG++++GQ++ + P ++ + C ++
Sbjct: 206 GLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLASLAAFLPKPQKIEAHCFQNEKV 265
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTL--FGQHQFNPK 287
V SG + + G V++WG YG LG+ + K S+ G + P
Sbjct: 266 TSVWSGWTHLVAQTETGKVFTWGRADYGQLGRQLESHEDWKARNQDSSFPCSGPQKSMPS 325
Query: 288 SKVESLIAGPCTFGAITNF----GHLYMWGKNQYGQLGLGT 324
S A + G+ N G Y WG N++G G G+
Sbjct: 326 SLRCLTGAAEVSCGSEHNLAVIGGTCYSWGWNEHGMCGDGS 366
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ + +G H + T+ FT+G +GQ GR + ED++ + + +K M
Sbjct: 264 KVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRQLESHEDWKARNQDSSFPCSGPQKSM 323
Query: 129 -----------DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+ CG +H L + G YS GW G G G N P
Sbjct: 324 PSSLRCLTGAAEVSCGSEHNLAVI-GGTCYSWGWNEHGMCGDGSEANVWAP 373
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 40/309 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
++F CG ++ +LG L +++ +PLP + P +K +A +G H
Sbjct: 3127 RVFACGEGTNGRLG------------LGVTY-NVPLPHQLPVLHQYVVKKVAVHSGGKHA 3173
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
+ +T + F++G G+ G G D + L +KI D CG H+ +
Sbjct: 3174 LALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-----RQVEALRAKKIRDVACGSSHSAAI 3228
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGD 198
+ G++Y+ G G G+ G G Q P LV + G R+V+++ S LA+++ G
Sbjct: 3229 SSQGELYTWGLGEYGRLGHGDNATQLKPKLV-AALAGRRVVQVACGSRDAQTLALTEDGA 3287
Query: 199 VFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
VF WG+ ++G++ + S TP + + G+ ++ + G L G V++WG
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGKG 3346
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
Y LG G KP I L G+ +V + G A+T+ G +Y WG
Sbjct: 3347 DYYRLGHGGD-QHVRKPQPI-GGLRGR-------RVIHVAVGALHCLAVTDSGQVYAWGD 3397
Query: 315 NQYGQLGLG 323
N +GQ G G
Sbjct: 3398 NDHGQQGSG 3406
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 22/257 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + +G G+ G G D + K H L G + D CG
Sbjct: 4318 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYD-RPKLVEH----LHGMSVADIACGS 4372
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG+V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 4373 AHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEA-LLGYRAIDIACGSGDAQTLC 4431
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ ++ V G L G V
Sbjct: 4432 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGAV 4490
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+WG G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 4491 YTWGKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDSGE 4541
Query: 309 LYMWGKNQYGQLGLGTV 325
+Y WG N GQLG GTV
Sbjct: 4542 VYTWGDNDEGQLGDGTV 4558
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 17/263 (6%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + I N A+++G + G G D + IA LE + CG ++
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHG-----DTHARAVPTKIAALEQHCVQSVFCGCTYSA 696
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDCVLAVSDKG 197
+T G + + G G + G G+ +++ P LV E + V L S LA++ +G
Sbjct: 697 VITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEG 756
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
VF WG+ +YG++ S +L + + R+ + +G L+ EG VY+WG
Sbjct: 757 LVFAWGDGDYGKLGNGNCNGSLQPIL--VESLPRVQRIFAGSQYSVALSSEGQVYTWGKA 814
Query: 258 LLGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
V RS++ +P + QH+ ++ + G A+++ G ++ WG+N
Sbjct: 815 TCLGHQLVERSVQGCSVPRLVSSLQHK-----RIVDMAVGVAHCLALSSSGEVFGWGRND 869
Query: 317 YGQLGLGTVEDQPF---PLKVAV 336
Q+ +V +P P+ VA+
Sbjct: 870 CQQVCPSSVSSEPLLRSPILVAL 892
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 3214 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNATQLKP-KLVAALA----- 3263
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 3264 ----GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 3314
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 3315 RLSGIGVIQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPI-GGLRGR 3371
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3372 RVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3402
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L LT G+VY+ G G DG+ G G+ + + P LV + G + ++ A
Sbjct: 4319 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVE-HLHGMSVADIACGSAHSAA 4377
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
++ G V WG YG++ +SE Q+ P+++ G R +D+A G G A T+ + D+
Sbjct: 4378 ITASGQVLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY-RAIDIACGSGDAQTLCITDD 4435
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-----IAGPC-- 298
V+SWG YG LG+G G K+ESL I C
Sbjct: 4436 DNVWSWGDGDYGKLGRG-----------------GSDGCKLPYKIESLAGLGVIKVECGS 4478
Query: 299 TFG-AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
F A+T G +Y WGK + +LG G+V+ P KVA
Sbjct: 4479 QFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAA 4517
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++ G+V++CG G +G+ GLG N + P L + + + V + S
Sbjct: 3112 IAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVV---KKVAVHS 3168
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR + + +I DVA G S
Sbjct: 3169 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRA-KKIRDVACGSSHSAA 3227
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ Q S+ +A
Sbjct: 3228 ISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLV-AALAGRRVVQVACGSRDAQTLA---- 3281
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ WG +G+LG G E P ++
Sbjct: 3282 ---LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3313
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 40/268 (14%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H+A G +++ F G + G+ G G+ H + L +
Sbjct: 3111 HIAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVP-----LPHQLPVLHQYVVKKVA 3165
Query: 132 C--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G H L LT GKV+S G G DG+ G G+ + P V + ++I ++
Sbjct: 3166 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEA-LRAKKIRDVACGSSH 3224
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG--SACTMLN 246
A+S +G+++ WG EYG++ + P++++ G R+V VA G + L
Sbjct: 3225 SAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAG-RRVVQVACGSRDAQTLALT 3283
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL-------IAG 296
++G V+SWG +G LG+G G + ++E L I
Sbjct: 3284 EDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIERLSGIGVIQIEC 3326
Query: 297 PCTFG-AITNFGHLYMWGKNQYGQLGLG 323
F A+T G ++ WGK Y +LG G
Sbjct: 3327 GAQFSLALTRAGEVWTWGKGDYYRLGHG 3354
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 24/257 (9%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G D +LG+ D + P +I +H ++ + G ++
Sbjct: 647 DSNHNAYSWGAGEDHRLGHGDTHARAVP-------TKIAALEQH---CVQSVFCGCTYSA 696
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ--DHTLF 139
VIT T+G ++ + G G + + +A L ++D G H+L
Sbjct: 697 VITCGGNLLTWGRGTYARLGHG-----NSDDRCLPTLVAALAEHTVVDVALGSGDAHSLA 751
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G V++ G G G+ G G+ N P LV R+ ++ + +A+S +G V
Sbjct: 752 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL---PRVQRIFAGSQYSVALSSEGQV 808
Query: 200 FGWGNSEY--GQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + Q+ E +Q S PR++S + RIVD+A G + C L+ G V+ WG
Sbjct: 809 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQH-KRIVDMAVGVAHCLALSSSGEVFGWGR 867
Query: 257 GLLGQGPKVSRSMKPTL 273
Q S S +P L
Sbjct: 868 NDCQQVCPSSVSSEPLL 884
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 4228 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 4284
Query: 206 EYGQISESEMQI-STPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
G++ + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 4285 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4344
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G +VS +P L+ L G V + G AIT G + WGK +YG+L
Sbjct: 4345 HGNRVSYD-RPKLV-EHLHGM-------SVADIACGSAHSAAITASGQVLTWGKGRYGRL 4395
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 4396 GHGDSEDQLRP 4406
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L +G AH++ +T F +G+ +G+ G G + G + L ++
Sbjct: 742 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLP--RVQRIFA 794
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH------LNNQETPCLVRGEIEGERIVKLSSA 186
G +++ L+ G+VY+ WG T LGH + P LV ++ +RIV ++
Sbjct: 795 GSQYSVALSSEGQVYT--WGK--ATCLGHQLVERSVQGCSVPRLV-SSLQHKRIVDMAVG 849
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
V LA+S G+VFGWG ++ Q+ S + S P + S + + + + G ACT
Sbjct: 850 VAHCLALSSSGEVFGWGRNDCQQVCPSSVS-SEPLLRSPI--LVALPTLPASGIACT 903
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G F + G G V K +A L+G+KI+ G
Sbjct: 4477 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK-----VAALQGKKIISIATGSL 4531
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + ++SG+VY+ G +GQ G G + + P LV ++G+ IVK++ LA+S
Sbjct: 4532 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSA-LQGKHIVKVTCGSAHTLALS 4589
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + + I R + ++ + VS +G VF G G+
Sbjct: 3079 WGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGTNGR 3138
Query: 210 ISES-EMQISTPRVLSQC-KGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPK 264
+ + P L + V + V V SGG L +G V+SWG G LG G +
Sbjct: 3139 LGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR 3198
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ KP + + K+ + G AI++ G LY WG +YG+LG G
Sbjct: 3199 TTLD-KPRQVEALR--------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD 3249
Query: 325 VEDQPFP-LKVAVGGQK 340
Q P L A+ G++
Sbjct: 3250 NATQLKPKLVAALAGRR 3266
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG F+V TKS ++ G +LG+ + VR P V
Sbjct: 4471 VIKVECGSQFSVALTKSG----AVYTWGKGDFHRLGHGS-----------VDHVRRPKKV 4515
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+I +ATG H + +D+ +T+G+N GQ G G V ++ L
Sbjct: 4516 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP-----RLVSAL 4570
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
+G+ I+ CG HTL L+ S
Sbjct: 4571 QGKHIVKVTCGSAHTLALSTS 4591
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG--GSACTMLND 247
VL +S +G + W ++S+ E + P+ L + G + +A G ++
Sbjct: 599 VLLLSQEGKLHAW------RLSKPEAE---PQPLEEA-GHETFISIAGHCEGRHFMAIDS 648
Query: 248 EGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA-I 303
YSWG G LG G +R++ PT I + QH V+S+ G CT+ A I
Sbjct: 649 NHNAYSWGAGEDHRLGHGDTHARAV-PTKIAA--LEQH------CVQSVFCG-CTYSAVI 698
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
T G+L WG+ Y +LG G +D+ P VA
Sbjct: 699 TCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAA 731
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 4215 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 4271
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 4272 VTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 4325
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 4326 LTTEGEVYAWGEGEDGKLGHG 4346
>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
Length = 457
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 95 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 149
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 150 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 208
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 209 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 268
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 269 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 321
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 322 SRIYAGYTCSF-AVSEVGGLFFWG 344
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 86 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 142
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 143 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 195
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 196 CGAEFSMIMDCKGNLYSFGCPEYGQLG 222
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 38 KGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 97
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 98 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 148
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 149 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 189
>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 143/324 (44%), Gaps = 51/324 (15%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF CG +LG+ D + P L++ ++ + +ATG HT+ + D
Sbjct: 68 QLFICGSALHGKLGFEDANQPSYPKFLLVQAMK--------GLFVTQVATGDYHTLCLLD 119
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
N + +G + G GK I L+ + I+ CG H+ L+ +G
Sbjct: 120 NGQVYAWGGTLHKKLGSKA-------GK--PARIETLK-QTIVQIGCGDFHSAALSANGD 169
Query: 146 VYSCGWGAD----GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
+Y+ G G GQ G GHLN+ ETP +V+ + IVK S ++A+ G+++
Sbjct: 170 LYTWGGGGRDYNRGQLGHGHLNDVETPQIVK-----DNIVKFSCGGYHMMALDKDGELWS 224
Query: 202 WGNSEYGQISESEMQ----------------ISTPRVLSQCKGVSRIVDVASGGSACTML 245
WG+ YG+ + E Q I + Q K S I +++ GG +L
Sbjct: 225 WGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLL 284
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+++G+VY+ GY GQ G K + + + + G+ + + AG +T
Sbjct: 285 SNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGK-------TIVQIAAGWNHSIVLT 337
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQ 328
+ +Y G NQ GQLG+G E +
Sbjct: 338 SHSDVYTCGHNQAGQLGVGDYESR 361
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP-CLVRGEIEGERI 180
L+ + + G +H+ +T+ G+++ CG G+ G N P L+ ++G +
Sbjct: 45 LKNQTVQLISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFV 104
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++++ L + D G V+ WG + + ++ + + L Q IV + G
Sbjct: 105 TQVATGDYHTLCLLDNGQVYAWGGTLHKKLGSKAGKPARIETLKQT-----IVQIGCGDF 159
Query: 241 ACTMLNDEGLVYSWG-------YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
L+ G +Y+WG G LG G ++ P ++ K +
Sbjct: 160 HSAALSANGDLYTWGGGGRDYNRGQLGHG-HLNDVETPQIV------------KDNIVKF 206
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G A+ G L+ WG YG+ G G +D P KV +
Sbjct: 207 SCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKI 249
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE-------- 108
V P VK I + G H + + + +++G+ +G+ G+G Q+
Sbjct: 193 VETPQIVK---DNIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKI 249
Query: 109 DYQGKWFCHN---IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ 165
++ K + + + + I + G H+L L+ G VY+CG+ GQ G+ NQ
Sbjct: 250 NFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQ 309
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPR 221
LV G I G+ IV++++ + + ++ DV+ G+++ GQ+ ES Q +
Sbjct: 310 NKFQLVIG-ISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRIN 368
Query: 222 VLSQCKGVSRIVDVASGGSACTMLND 247
L Q RI + +GG+ L D
Sbjct: 369 FLEQ----RRIKQLFAGGNHSWALID 390
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG-YHD---PRK-KGNPLELVMSFVR 58
I +CG G+ ++A KD L +G G+ ++ G + D P+K K N + +
Sbjct: 203 IVKFSCG-GYHMMAL-DKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDD 260
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
I + K ST IK ++ G H++++++ + G GQ G ++ + Q K+
Sbjct: 261 IFVQNKQEST-IKEISLGGHHSLLLSNKGIVYACGYAQHGQLG---IKATENQNKFQL-- 314
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ + G+ I+ G +H++ LT VY+CG GQ G+G ++ + +E
Sbjct: 315 VIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINF-LEQR 373
Query: 179 RIVKLSSAVDCVLAVSD 195
RI +L + + A+ D
Sbjct: 374 RIKQLFAGGNHSWALID 390
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4145
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4204
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4263
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4315
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTV 4337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLSLSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G ++++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4069
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4128
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4185
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4186 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S L++S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4293
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4294 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4348
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3994 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 4050
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4051 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQI 4126
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4145
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4204
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4263
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4315
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTV 4337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLSLSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G ++++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4069
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4128
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4185
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4186 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S L++S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4293
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4294 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4348
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3994 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 4050
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4051 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQI 4126
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 127/313 (40%), Gaps = 32/313 (10%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG-RAHTIVITDN 86
G N+ QLG + P V + LP T I +A G H++ +T
Sbjct: 63 LAWGFNALGQLGDGTTTNRNTP-------VTVDLPAD---TTITAIAAGVNGHSLAVTSA 112
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL-EGEKIMDAVCGQDHTLFLTESGK 145
+G N++GQ G G + DL G I G+ H+L +T +G
Sbjct: 113 STMLAWGFNTWGQLGDGTTTNRNTPVA------VDLPTGTTITAIAAGKSHSLAVTSAGT 166
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ + G + GQ G G N+ TP V G I +++ LA++ G + WG +
Sbjct: 167 MLAWGLNSAGQLGDGTTTNRNTPVAVD-LPTGTTITAIAAGNGHSLALTSAGTMLAWGEN 225
Query: 206 EYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
+GQ+ + + +TP + G + I +A GG + G + +WG+ G LG
Sbjct: 226 TWGQLGDGTTTNRNTPVTVDLPTGTT-ITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGD 284
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G +R+ + T SL A T+ G + WG N +GQLG
Sbjct: 285 GTTTNRNTPVAVDLPTGTTITAIAGGGGGHSLAA--------TSTGTMLAWGLNSFGQLG 336
Query: 322 LGTVEDQPFPLKV 334
GT ++ P+ V
Sbjct: 337 DGTTSNRSTPVTV 349
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 134/339 (39%), Gaps = 36/339 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
IT IA G +A S + G N+ QLG + P V + LP
Sbjct: 94 TITAIAAGVNGHSLAVTSAST---MLAWGFNTWGQLGDGTTTNRNTP-------VAVDLP 143
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
T I +A G++H++ +T +G NS GQ G G + DL
Sbjct: 144 TG---TTITAIAAGKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTNRNTPVA------VDL 194
Query: 123 -EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G I G H+L LT +G + + G GQ G G N+ TP V G I
Sbjct: 195 PTGTTITAIAAGNGHSLALTSAGTMLAWGENTWGQLGDGTTTNRNTPVTVD-LPTGTTIT 253
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
L+ LAV+ G + WG + +GQ+ + + +TP + G + GG
Sbjct: 254 ALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGG 313
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G + +WG +G LG G +RS T+ + + ++ AG
Sbjct: 314 HSLAATSTGTMLAWGLNSFGQLGDGTTSNRSTPVTV---------DLPAGTTITAIAAGG 364
Query: 298 CTFG--AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ A T+ G + WG N GQLG GT ++ P+ V
Sbjct: 365 GSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTPVTV 403
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 97/242 (40%), Gaps = 27/242 (11%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
IT IA G G ++ T + + G N+ QLG + P V + LP
Sbjct: 199 TITAIAAGNGHSLALTSAG----TMLAWGENTWGQLGDGTTTNRNTP-------VTVDLP 247
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
T I LA G H++ +T +G N +GQ G G + DL
Sbjct: 248 TG---TTITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVA------VDL 298
Query: 123 EGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ A+ G H+L T +G + + G + GQ G G +N+ TP V G I
Sbjct: 299 PTGTTITAIAGGGGGHSLAATSTGTMLAWGLNSFGQLGDGTTSNRSTPVTVD-LPAGTTI 357
Query: 181 VKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+++ LA + G + WG + GQ+ + + STP + G + I V +
Sbjct: 358 TAIAAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTPVTVDLPAGTT-ITAVTA 416
Query: 238 GG 239
GG
Sbjct: 417 GG 418
>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
Length = 427
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 65 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 120 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 178
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 291
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 292 SQIYAGYTCSF-AVSEVGGLFFWG 314
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 56 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 112
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 113 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 165
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 166 CGAEFSMIMDCKGNLYSFGCPEYGQLG 192
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 8 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 67
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 68 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 118
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 119 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 159
>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
Length = 564
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 202 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 256
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 257 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 315
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 316 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 375
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 376 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 428
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 429 SQIYAGYTCSF-AVSEVGGLFFWG 451
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 193 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 249
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 250 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 302
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 303 CGAEFSMIMDCKGNLYSFGCPEYGQLG 329
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 145 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 204
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 205 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 255
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 256 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 296
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4146
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTDGS 4205
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4264
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4265 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASNGDVYAWGS 4316
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4317 NSEGQLGLGHTNHVREPTLVTV 4338
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLVEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P L+ +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLVEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4016 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4070
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4071 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4129
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4130 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4186
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4187 IGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4240 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4286
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P LV E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLVE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4240 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4294
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4295 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4349
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3995 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4051
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4052 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4102
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4103 FSWGDGDYGKLGHGNSDRQRRPRQI 4127
>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
Length = 448
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 86 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 140
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 141 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 199
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 200 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 259
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 260 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 312
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 313 SQIYAGYTCSF-AVSEVGGLFFWG 335
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 77 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 133
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 134 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 186
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 187 CGAEFSMIMDCKGNLYSFGCPEYGQLG 213
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 29 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 88
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 89 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 139
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 140 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 180
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4156
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4157 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4215
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4216 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4274
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4275 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4326
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4327 NSEGQLGLGHTNHVREPTLVTV 4348
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLSLSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G ++++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4026 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4080
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4081 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4139
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4140 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4196
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4197 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4249
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4250 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4296
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S L++S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4250 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4304
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4305 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4359
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 4005 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 4061
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4062 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4112
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4113 FSWGDGDYGKLGHGNSDRQRRPRQI 4137
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4145
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4204
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4263
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4315
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTV 4337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLSLSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G ++++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4069
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4128
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4185
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4186 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S L++S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4293
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4294 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4348
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3994 KCDVYLWGAGRHGQLAEAGRNVMVP---ATAPSFSQAQQVICGQNCTFVIQANGTVLACG 4050
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4051 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQI 4126
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 131/258 (50%), Gaps = 21/258 (8%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +L+ +F
Sbjct: 496 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KLISAFCG-- 547
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K ++ H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 548 ---KQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVA 599
Query: 121 DLEGEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D C G TL +TE+G+V+S G G G+ G G + +TP LV +++
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE-KLQDL 658
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 717
Query: 238 GGSACTMLNDEGLVYSWG 255
G + C L ++ V+SWG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P L+ G+ G+R+V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 625
Query: 250 LVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGS-QFSV------------- 671
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 --ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +I C + L L+ SG+VY+ + +D P LV+G +
Sbjct: 446 CAGLASLGVSQI---ACAEKRFLILSRSGRVYTQAYSSDAL----------APQLVQGLV 492
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+++S G
Sbjct: 493 S-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
R+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 QRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 229 VSR-IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQH 282
VSR IV +A S G L G VYSWG G LG G V +P LI S G+
Sbjct: 492 VSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKLI-SAFCGKQ 549
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 A---GQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
Length = 427
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 65 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 120 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 178
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 291
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 292 SQIYAGYTCSF-AVSEVGGLFFWG 314
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 56 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 112
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 113 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 165
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 166 CGAEFSMIMDCKGNLYSFGCPEYGQLG 192
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 8 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 67
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 68 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 118
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 119 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 159
>gi|330791573|ref|XP_003283867.1| hypothetical protein DICPUDRAFT_147589 [Dictyostelium purpureum]
gi|325086253|gb|EGC39646.1| hypothetical protein DICPUDRAFT_147589 [Dictyostelium purpureum]
Length = 454
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 48/326 (14%)
Query: 44 RKKGNPLELVMSFVRIPLPVK-HPSTQIKHLATGRAHTIVITD-----NEG-AFTFGNNS 96
K GN + L R P V ++ + GR++++V+T NEG FG N+
Sbjct: 117 NKSGN-MALPSDHYRFPTLVDILKEANVEKVVGGRSYSLVLTSKHYYFNEGKVLGFGENN 175
Query: 97 FGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ 156
FGQ G G D K + +L+ +++D G DH+L +T SG V+ G+ +GQ
Sbjct: 176 FGQIGTG-----DIHNKTVPTLVENLDQFRVIDVDVGLDHSLVVTSSGHVFGWGYNVEGQ 230
Query: 157 TGL------------------GHLNNQ-------ETPCLVRGEIEGERIVKLSSAVDCVL 191
G L Q +P LV G +E +I K+ D
Sbjct: 231 IGQKVVEYTRVQSSTDQLPGEDSLEGQMVADVEYSSPTLVPG-LEKVKISKVFCGYDSSF 289
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+S +G+V+ +G++E G + I ++ K +I ++SG S L + G V
Sbjct: 290 LLSARGNVYAFGSNEVGSLGLGGDHIGRVVTPTKVKLPEKIQQISSGSSHTLFLGNSGNV 349
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y G+ G LG G S +P L+ F + ++ + AG A+ + G+
Sbjct: 350 YGCGWGSEGRLGLGDNTSNRNEPVLL--NYFKDNNI----RIIKVSAGGSHSLALDDQGN 403
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
+Y WG G+LG G +D P K+
Sbjct: 404 VYSWGNGSNGKLGHGDEKDCHLPTKI 429
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH-----------DPRKKGNPL 50
++ D+ G ++V T S +FG G N + Q+G D + L
Sbjct: 199 FRVIDVDVGLDHSLVVTSSG----HVFGWGYNVEGQIGQKVVEYTRVQSSTDQLPGEDSL 254
Query: 51 E-LVMSFVRIPLPVKHP---STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ 106
E +++ V P P +I + G + +++ + FG+N G G G
Sbjct: 255 EGQMVADVEYSSPTLVPGLEKVKISKVFCGYDSSFLLSARGNVYAFGSNEVGSLGLG--- 311
Query: 107 EEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQ 165
D+ G+ L EKI G HTLFL SG VY CGWG++G+ GLG + +N+
Sbjct: 312 -GDHIGRVVTPTKVKLP-EKIQQISSGSSHTLFLGNSGNVYGCGWGSEGRLGLGDNTSNR 369
Query: 166 ETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
P L+ + RI+K+S+ LA+ D+G+V+ WGN G++
Sbjct: 370 NEPVLLNYFKDNNIRIIKVSAGGSHSLALDDQGNVYSWGNGSNGKL 415
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 47/302 (15%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+K+ +T I H+ + + + F+FG SF G+ ED K + I L
Sbjct: 16 IKNKNTIINHILNKKFYCTNNKEKNLLFSFG--SFDNLKLGLPGNED---KLYPQQITHL 70
Query: 123 EG-EKIMDAVCGQDHTLFLTE----------------SGKVYSCGWGADGQTGLGHLNNQ 165
KI ++ LT+ S KVY G G L ++
Sbjct: 71 PPFLKIKQIGTSWLNSFLLTDESSTSTSLTTTTNKPVSNKVYMWGTNKSGNMALPS-DHY 129
Query: 166 ETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP 220
P LV E E++V S + ++G V G+G + +GQI ++ T
Sbjct: 130 RFPTLVDILKEANVEKVVGGRSYSLVLTSKHYYFNEGKVLGFGENNFGQIGTGDIHNKTV 189
Query: 221 RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKV-------------- 265
L + R++DV G ++ G V+ WGY + GQ G KV
Sbjct: 190 PTLVENLDQFRVIDVDVGLDHSLVVTSSGHVFGWGYNVEGQIGQKVVEYTRVQSSTDQLP 249
Query: 266 -SRSMKPTLIPSTLFGQHQFNP---KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
S++ ++ + P K K+ + G + ++ G++Y +G N+ G LG
Sbjct: 250 GEDSLEGQMVADVEYSSPTLVPGLEKVKISKVFCGYDSSFLLSARGNVYAFGSNEVGSLG 309
Query: 322 LG 323
LG
Sbjct: 310 LG 311
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4056 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4110
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4111 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4169
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4170 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4228
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4229 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4280
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4281 NSEGQLGLG 4289
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 3980 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4034
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4035 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4093
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4094 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4150
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4151 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4201
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4202 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4250
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4204 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4258
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4259 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4313
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 2546 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 2600
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 2601 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 2659
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 2660 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 2718
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 2719 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 2770
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 2771 NSEGQLGLG 2779
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 2470 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 2524
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 2525 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 2583
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 2584 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 2640
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 2641 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 2691
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 2692 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 2740
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 2694 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 2748
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 2749 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 2803
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 2650 KVYACGEATNGRLG------------LGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHA 2697
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 2698 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 2749
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 2750 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 2808
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 2809 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2867
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 2868 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 2918
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2948
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 236 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 290
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 291 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 349
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 350 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 408
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 409 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 446
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 2738 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 2787
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 2788 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNVPQNIERL 2840
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2841 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 2899
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 2900 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2957
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G + + P ++ + G +V +++
Sbjct: 3685 GGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES-LRGIEVVDVAAGGAHSAC 3743
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VD+A G G A T+ L D+
Sbjct: 3744 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDIACGSGDAQTLCLTDD 3801
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI--------AGP 297
V+SWG YG LG+G G +K++SL G
Sbjct: 3802 DTVWSWGDGDYGKLGRG-----------------GSDGCKVPTKIDSLTGLGVVKVECGS 3844
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G +Y WGK Y +LG G+ + P +V
Sbjct: 3845 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3881
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3677 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRP-----RVIESLRGIEV 3731
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 3732 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 3790
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 3791 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLG-VVKVECGSQFSVA 3849
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 3850 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 3900
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 3901 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 3940
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 2635 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSG 2693
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 2694 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 2752
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 2753 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 2804
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2805 -ALTDEGLVFSWGDGDFGKLGRGGSE 2829
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 3729 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 3779
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 3780 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPTKIDS 3831
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 3832 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 3890
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 3891 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 3947
Query: 240 SACTM 244
SA T+
Sbjct: 3948 SAHTL 3952
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P + G+ G+ +V ++ A
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAA 254
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 255 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 310
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 311 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 359
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 360 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 389
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3581 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3635
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +S+P +L + V + V V SGG C L+ E
Sbjct: 3636 FAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3695
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 3696 GEVYSWGEAEDGKLGHGSR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 3746
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 3747 AGDLYTWGKGRYGRLGHSDSEDQLKP 3772
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ SG+VY+ + +D P LV+G +
Sbjct: 134 CEGLANLGVTQI---ACAEKRFLILSRSGRVYTQAYNSDTL----------APQLVQG-L 179
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+ +S G
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAG 239
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 240 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 292
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 293 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 329
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 184 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKAISAFSGKQA 238
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 239 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 287
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 3843 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 3897
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 3898 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 3955
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 2896 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 2950
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 2951 RVACGSSHSVAWT 2963
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T+ G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI +++ + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTVDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG--AI 303
Y++G G LG +P+ L H+ +P+ + E +I C G +
Sbjct: 250 YTFGEPENGKLG-------------LPNQLLINHR-SPQRVLGIPEKVIQVACGGGHTVV 295
Query: 304 TNFGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTDKVVYAFGLGQFGQLGLGT 316
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 38/323 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED--YQGKWFCHNIADLEG 124
+K A GR HT+V TD + G N+ GQ G G + D +Q +F
Sbjct: 127 ---VKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPK------ 177
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+ I G + + LTE GK++ G ++GQ G L N+ C+ G+ I +S
Sbjct: 178 DNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIG---LKNKSNVCIPHEVTVGKPISWIS 234
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACT 243
V+ G+++ +G E G++ + R + G+ +++ VA GG
Sbjct: 235 CGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVIQVACGGGHTV 294
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L D+ +VY++G +G LG G + + +P +I K+ + G
Sbjct: 295 VLTDK-VVYAFGLGQFGQLGLGTFLFETSEPKVIERI--------KDQKISYISCGENHT 345
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
+T+ G +Y +G ++G+LGLG
Sbjct: 346 ALMTDIGLMYTFGDGRHGKLGLG 368
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P +L+++ R P V
Sbjct: 233 ISCGYYHSAFVTV--DGELYTFGEPENG----------KLGLPNQLLINH-RSPQRVLGI 279
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+TD + + FG FGQ G G E + K I ++ +K
Sbjct: 280 PEKVIQVACGGGHTVVLTD-KVVYAFGLGQFGQLGLGTFLFETSEPKV----IERIKDQK 334
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 335 ISYISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN-DEGL 250
V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G T+++ D+G
Sbjct: 88 VTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALK--PEKVKLAACGRNHTLVSTDKGS 145
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R T F PK ++ L AG T A+T G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRD--------TFHQIGFFTPKDNIKQLSAGANTSAALTEDG 197
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL + P +V VG
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVG 227
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP PS L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 758
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3013 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 4049 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSAC 4107
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 4165
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4166 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4216
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4245
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGTEV 4095
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4154
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4214 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4265 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4304
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3945 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTL 3999
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G ++V + AG +T
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------TEVVDVAAGGAHSACVTA 4110
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKP 4136
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4094 EVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ----- 4143
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H + +G A T+ +TD++ +++G+ +G+ GRG G I L
Sbjct: 4144 -GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDSL 4196
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4197 TGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIA 4255
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ + S+ G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + GSA
Sbjct: 4256 IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACGSA 4313
Query: 242 CTM 244
T+
Sbjct: 4314 HTL 4316
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4261
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + +E G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4262 HCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4319
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|319943960|ref|ZP_08018240.1| RCC1 repeat domain protein [Lautropia mirabilis ATCC 51599]
gi|319742721|gb|EFV95128.1| RCC1 repeat domain protein [Lautropia mirabilis ATCC 51599]
Length = 461
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 135/317 (42%), Gaps = 49/317 (15%)
Query: 33 NSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST----QIKHLATGRAHTIVITDNEG 88
N+ + + PR PL MS + I P++ + LA R +V+ +
Sbjct: 105 NTSASVRSMSPR----PLLATMSALEI-TPLREIPLGLVGDVAGLAQARDFMLVLGADGR 159
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+ G N+ GQ G GI Q + ++ L G G H L L G ++
Sbjct: 160 LWARGLNTRGQLGVGIAQAQ-------VNDFLPLPGHDYQAVAVGGAHALALDRQGNLW- 211
Query: 149 CGWGAD--GQTGLGHLNN--QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
GWG D GQ G G +N+ Q+ P + IV +++ LAV G + WG
Sbjct: 212 -GWGDDRHGQLGRGRVNHTPQDRPTRI-----ARDIVAIAAGDRHSLAVRKDGALLAWGE 265
Query: 205 SEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
+ +G++ S+ I+ P V+ Q VA+G ++ +G +++WG G LG
Sbjct: 266 NRWGEVGNGSQETITDPVVIGQG-----FRSVAAGAGYSLAIDRQGRLWAWGRGESGRLG 320
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G + +S +P LI S S+ A AI G L+ WG N GQL
Sbjct: 321 TGNEDDQS-RPVLI------------GSGYRSVTASTAQSFAIGQDGTLWAWGSNLLGQL 367
Query: 321 GLGTVEDQPFPLKVAVG 337
G GT ED+ P+K+ G
Sbjct: 368 GDGTHEDRLSPVKIGSG 384
>gi|410973279|ref|XP_003993081.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
nucleotide exchange factor [Felis catus]
Length = 462
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 41/319 (12%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
A+++ + LF G NS QLG P +L F + ++ + G
Sbjct: 7 ASEAAHEAAVLFAWGANSYGQLGLGHKEDVLLPQQL-NDFCKPEC--------VRRITGG 57
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H+ ++TD G F G N GQ G G ++ Y L G + CG D
Sbjct: 58 GGHSAIVTDEGGLFVCGLNKDGQLGLGHTEDVLY-----FTTCRSLLGCPVQQVACGWDF 112
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVS 194
T+ LTE+G+V SCG + GQ G+ H + C+V IE E++V +++ + LA +
Sbjct: 113 TIILTENGQVLSCGSNSFGQLGVPHGPRR---CVVPQAIELLKEKVVCIAAGLRHALAAT 169
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLS---QCKGVSRIVDVASGGSACTM------- 244
G VF WG ++ S ++ + L K SR+ + + + C +
Sbjct: 170 ASGIVFQWGTG----LASSGRRLCPGQTLPLFLTAKEPSRVTGLENSKATCVLAGSDHSA 225
Query: 245 -LNDEGLVYSWGYGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L D G +Y WG GQ ++ + P I + F KV S+ +G A
Sbjct: 226 SLTDAGELYVWGSNKHGQLASLAAFLPLPQKIEAHCF------QNEKVTSVWSGWTHLVA 279
Query: 303 ITNFGHLYMWGKNQYGQLG 321
T G ++ WG+ YGQLG
Sbjct: 280 QTETGRVFTWGRADYGQLG 298
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 122/306 (39%), Gaps = 61/306 (19%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
+ +ACG+ FT++ T +N ++ CG NS QLG H PR+ +P
Sbjct: 103 VQQVACGWDFTIILT----ENGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + T + F +G GR + + + +
Sbjct: 148 IELLKEKVVCIAAGLRHALAATASGIVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL-------NNQETPCLVR 172
LE K + G DH+ LT++G++Y WG++ L L E C
Sbjct: 207 TGLENSKATCVLAGSDHSASLTDAGELYV--WGSNKHGQLASLAAFLPLPQKIEAHCF-- 262
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-------------------S 213
+ E++ + S ++A ++ G VF WG ++YGQ+ S
Sbjct: 263 ---QNEKVTSVWSGWTHLVAQTETGRVFTWGRADYGQLGRKLESREGWKLQSHDSSLPCS 319
Query: 214 EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMK 270
Q S P L G + + S GS + G YSWG+ G+ G G + +
Sbjct: 320 GPQKSMPSCLHCLTGAAEV----SCGSEHNLAVIGGTCYSWGWNEHGMCGDGSE-ANIWA 374
Query: 271 PTLIPS 276
P +PS
Sbjct: 375 PKPVPS 380
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V + ++ +A G HT + + G +G+N GQ G G +
Sbjct: 351 PVAVSGLPSGVETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTP-----VAV 405
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G+ HT T SG V+ G +DGQ G G + TP V G G
Sbjct: 406 SGLP-SGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVE 464
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ C L + G V+ WG + GQ+ + S + TP +S S + +A+G
Sbjct: 465 TIAAGGWHTCAL--TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLP--SGVTAIAAG 520
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G L G V+ WG G LG G RS P + G S V ++ A
Sbjct: 521 GVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRST-----PVAVSGL-----PSGVTAIAA 570
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T G ++ WG N +GQLG GT ++ P+ V+
Sbjct: 571 GDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVS 610
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 139/337 (41%), Gaps = 42/337 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T IA G T T S ++ G NSD QLG + + P+ V
Sbjct: 412 VTAIAAGRLHTCARTSSG----GVWCWGDNSDGQLG-----------DGSFTDSSTPVAV 456
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ ++ +A G HT +T + G + +G N+ GQ G G ++I +
Sbjct: 457 SGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGST----------IYHITPVA 506
Query: 124 GEKIMDAV----CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ V G HT LT SG V+ G GQ G G ++ TP V G G
Sbjct: 507 VSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSGVT 566
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ C L + G V+ WG +++GQ+ + + STP +S S + +A+G
Sbjct: 567 AIAAGDIHTCAL--TGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLP--SGVTAIAAG 622
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L G V+ WGY L GQ + S + S L S V ++ AG
Sbjct: 623 LRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGL--------PSGVTAIAAGGW 674
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A T+ G + WG N GQLG GT + P+ V+
Sbjct: 675 YTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVS 711
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V + + +A G AHT +T + + +G+N +GQ G G Y + +
Sbjct: 96 PVAVSGLPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDG-----SYTTRSTPVAV 150
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G HT T SG V+ G GQ G G ++ TP V G
Sbjct: 151 SGLP-SGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVT 209
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+ A C A G+V+ WG + YGQ+ + S STP +S S + +A+G
Sbjct: 210 AIAAGDAHTC--ARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLP--SGVTAIAAG 265
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G L G V WG G LG G RS P + G S V ++ A
Sbjct: 266 GVHTCALTGSGGVRCWGANYSGQLGNGLTFGRST-----PGAVSGL-----PSGVTAIAA 315
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T G ++ WG N GQLG GT + P+ V+
Sbjct: 316 GDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVS 355
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 118/280 (42%), Gaps = 27/280 (9%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V + + +A G HT +T + G + +G N GQ G G + +
Sbjct: 504 PVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTP-----VAV 558
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEG 177
+ L + G HT LT SG V+ WG + GQ G G N+ TP V G G
Sbjct: 559 SGLP-SGVTAIAAGDIHTCALTGSGGVWC--WGGNDFGQLGDGTTTNRSTPVAVSGLPSG 615
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+ +++ + A++ G V+ WG + GQ+ + STP +S S + +A+
Sbjct: 616 --VTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGLP--SGVTAIAA 671
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
GG G V WG G LG G RS P + G S V ++
Sbjct: 672 GGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRST-----PVAVSGL-----PSGVTAIA 721
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ + G ++ WG+N GQLG G + P+ V
Sbjct: 722 AGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVDV 761
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+ V + + +A G HT +T + G +G N GQ G G+ G +
Sbjct: 249 PVAVSGLPSGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGA-----V 303
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L + G HT LT SG V+ G GQ G G + TP V G G
Sbjct: 304 SGLP-SGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSGVE 362
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASG 238
+ C L S G V WG+++ GQ+ + STP +S S + +A+G
Sbjct: 363 TIAAGDYHTCALMSS--GGVRCWGHNDRGQLGDGTTTARSTPVAVSGLP--SGVTAIAAG 418
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G V+ WG G LG G S + P + G S VE++ A
Sbjct: 419 RLHTCARTSSGGVWCWGDNSDGQLGDG-----SFTDSSTPVAVSGL-----ASGVETIAA 468
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G A+T G ++ WG+N GQLG G+ P+ V+
Sbjct: 469 GGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVS 508
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEI 175
+ + L+G + A G HT T SG V+ WG + G+ G G + TP V G
Sbjct: 48 SFSPLQGVTAIAA--GGGHTCARTSSGGVWC--WGGNDFGRLGDGSYTDSSTPVAVSGLP 103
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVD 234
G + A C L + G+V+ WG++ YGQ+ + S STP +S S +
Sbjct: 104 SGVTAIAAGGAHTCAL--TSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLP--SGVTA 159
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A+GG G V+ WG G LG G RS P + G S+V
Sbjct: 160 IAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRST-----PVAVSGL-----PSEVT 209
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ AG A + G ++ WG N YGQLG G+ D P+ V+
Sbjct: 210 AIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVS 253
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 112/276 (40%), Gaps = 28/276 (10%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + +A G HT T + G + +G N FG+ G G + ++ L
Sbjct: 51 PLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTP-----VAVSGLP-S 104
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ G HT LT SG+V+ WG++ GQ G G + TP V G G +
Sbjct: 105 GVTAIAAGGAHTCALTSSGEVWC--WGSNFYGQLGDGSYTTRSTPVAVSGLPSGVTAIAA 162
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
C A + G V+ WG + GQ+ + + STP +S S + +A+G +
Sbjct: 163 GGWHTC--ARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLP--SEVTAIAAGDAHT 218
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
G V+ WG YG LG G S P + G S V ++ AG
Sbjct: 219 CARMSSGEVWCWGGNNYGQLGDGSYTDSST-----PVAVSGL-----PSGVTAIAAGGVH 268
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+T G + WG N GQLG G + P V+
Sbjct: 269 TCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVS 304
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4139
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4140 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4198
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4199 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4257
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4258 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4309
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4310 NSEGQLGLG 4318
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4009 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4063
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4064 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4122
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4123 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4179
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4180 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4230
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4231 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4279
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4233 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4287
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4288 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4342
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 48/291 (16%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV- 131
LA G AHT+V+T+ + G N +GQ G + H++ LE E + D
Sbjct: 47 LACGGAHTLVLTEEGRVYASGLNDWGQLGLPLST---------GHSMEFLEVEGLPDEAK 97
Query: 132 -----CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSS 185
G H+ ++E G+VY G GQ GLG + E ++ RI L+
Sbjct: 98 FTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALAL 157
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-------------TPRVLSQCKGVSRI 232
+ LA+S++G+V WG S G++ E S TPR++ + V ++
Sbjct: 158 GAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDV-KV 216
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGL-----LGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
VA+G + L+++G ++++G G LG +S + +IP
Sbjct: 217 SKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIP------------ 264
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
VE + G GAI+ G LYMWG N+YG LG G L + V G
Sbjct: 265 -PVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEG 314
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 61/360 (16%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP-LPVKH 65
+ACG T+V T+ +++ GLN QLG P G+ +E F+ + LP
Sbjct: 47 LACGGAHTLVLTEEG----RVYASGLNDWGQLGL--PLSTGHSME----FLEVEGLP--- 93
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ H+A G H+ I+++ + +G N+ GQ G G + + ++ D
Sbjct: 94 DEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDF--- 150
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG------------HLNNQETPCLVRG 173
+I G +H+L L+E G+V S G +G+ G G +++ TP LV+G
Sbjct: 151 RIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKG 210
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI- 232
++ K+++ + + ++G +F +G+ E ++ + R +S+ K V I
Sbjct: 211 -FRDVKVSKVAAGLTHSACLDEQGSLF-----TFGKGRECQLGLGGDRDISEPKRVPVIP 264
Query: 233 --VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNP 286
++A GG ++ G +Y WG YG LG G K + P L+ L
Sbjct: 265 PVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGAL-------E 317
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMW------------GKNQYGQLGLGTVEDQPFPLKV 334
+V + G A+T G ++ W G + GQLGLG D P +V
Sbjct: 318 SLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNENDFLEPTQV 377
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 202 WGNSEYGQISESEMQ-ISTPRVLSQCKGVSRI--VDVASGGSACTMLNDEGLVYSWG--- 255
WGN +YG++ ++ + P V CK + + + +A GG+ +L +EG VY+ G
Sbjct: 14 WGNGDYGRLGQASGESFWEPTV---CKSMQHLQPIALACGGAHTLVLTEEGRVYASGLND 70
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
+G LG SM+ + ++K + AG AI+ G +YMWG+N
Sbjct: 71 WGQLGLPLSTGHSMEFLEVEG-------LPDEAKFTHIAAGDFHSAAISEDGRVYMWGRN 123
Query: 316 QYGQLGLG 323
GQLGLG
Sbjct: 124 TQGQLGLG 131
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 30/183 (16%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K++ +A G + + D+ LF G + QLG R P +
Sbjct: 214 VKVSKVAAG----LTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRV--------- 260
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
PV P ++ +A G HT I+ N + +G+N +G G G +
Sbjct: 261 PVIPP---VEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGA-- 315
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD------------GQTGLGHLNNQETPC 169
LE ++ CG HT+ LT G V++ GWG GQ GLG+ N+ P
Sbjct: 316 LESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNENDFLEPT 375
Query: 170 LVR 172
V+
Sbjct: 376 QVK 378
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4132
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4133 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4191
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4192 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4250
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4251 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4302
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4303 NSEGQLGLG 4311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4002 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4056
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4057 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4115
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4116 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4172
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4173 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4223
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4224 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4272
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4226 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4280
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4281 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4335
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ CG +HTL LT K++S G+ GQ G+ ++ + P V ++ ++K+
Sbjct: 74 RRVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGIENVVDSAVPLPV-DTLQKCNVIKIK 132
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ----------ISTPRVLSQCKGVS---- 230
+ + A++DKGD++ WG S +GQ+ +M I P + Q K
Sbjct: 133 AGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQN 192
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+ +V G ++ G ++SWG YG LG G ++ L+P + +FN
Sbjct: 193 IQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTK-----LVPVPV----RFNR 243
Query: 287 KSK--VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
S V + +G +T G +Y+WG NQYGQLG G D P KV
Sbjct: 244 HSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKKV 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 32/276 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ ++ G HT+++T F+ G N GQ G E+ + L+ ++
Sbjct: 75 RVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGI-----ENVVDSAVPLPVDTLQKCNVI 129
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN---NQETPCLVR----GEIEGERIV 181
G + + +T+ G +Y G + GQ G G +N NQ P + E E + +
Sbjct: 130 KIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPI 189
Query: 182 KLSSAVDCV-------LAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV 233
+ V +AVS G +F WG+++YGQ+ P + + +RIV
Sbjct: 190 YQNIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIV 249
Query: 234 -DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
D+ASG ++L EG VY WG YG LGQG + + +P + G +F K
Sbjct: 250 VDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLN-----VPKKVKGSIEF---KK 301
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ + G +T +Y +G N++ QLG G++
Sbjct: 302 INRMALGNNHTILLTKDQDVYTFGNNEFYQLGHGSM 337
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE--DYQGKWFCHNIADLEGEK 126
Q ++ G HTI ++ F++G+N +GQ G G + ++ H+
Sbjct: 194 QYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHST-----RI 248
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++D G H+ LT G VY G GQ G G + P V+G IE ++I +++
Sbjct: 249 VVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKKVKGSIEFKKINRMALG 308
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEM----------QISTPRVLSQCKGVSRIVDVA 236
+ + ++ DV+ +GN+E+ Q+ M I PR+L VS I A
Sbjct: 309 NNHTILLTKDQDVYTFGNNEFYQLGHGSMGGKNKIYFPTLIQKPRLL-----VSDI--FA 361
Query: 237 SGGSACTMLNDEG 249
+G S+ + DE
Sbjct: 362 AGDSSAYFVIDES 374
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 59 IPLPVK---HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+P+PV+ H + + +A+G H+ ++T + +G+N +GQ G+G + + K
Sbjct: 235 VPVPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKKV- 293
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL 162
+E +KI G +HT+ LT+ VY+ G Q G G +
Sbjct: 294 ---KGSIEFKKINRMALGNNHTILLTKDQDVYTFGNNEFYQLGHGSM 337
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVP-----MLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP PS L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 758
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 42/328 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L + V IP V S+ + K +A +G H
Sbjct: 3016 KVYACGEATNGRLG----------LGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATA 3065
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3066 LTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D+G
Sbjct: 3118 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEG 3176
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
VF WG+ ++G++ + + P+ + + G + + G L G+V++WG
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G V KP ++ L G+ K+ + G A+T+ G +Y WG
Sbjct: 3236 GDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYAWG 3286
Query: 314 KNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
N +GQ G GT P V + GQK
Sbjct: 3287 DNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3104 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3153
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3154 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3206
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3207 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3265
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3266 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3001 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQVTALSSYVVKKVAVHSG 3059
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3118
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3170
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3171 -ALTDEGLVFSWGDGDFGKLGRGGSE 3195
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4045 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEL 4099
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4100 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4158
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4159 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4217
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4218 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4268
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
T G +Y WG N GQLG GT P V A+ G+K
Sbjct: 4269 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKK 4308
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4097 IELVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4147
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4148 --GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4199
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4200 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4258
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR++ +G + V+ + G
Sbjct: 4259 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQG--KKVNRVACG 4315
Query: 240 SACTM 244
SA T+
Sbjct: 4316 SAHTL 4320
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AVPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3961 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4014
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4015 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4073
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLRGI-ELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4132
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4133 DSEDQ-LKPKLV-EALQGHRVVDVACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4185
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4186 GGSDGCKVPMKI 4197
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3949 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4003
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4004 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4063
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G + + AG +T
Sbjct: 4064 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRGIELVD-------VAAGGAHSACVTA 4114
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4115 AGDLYTWGKGRYGRLGHSDSEDQLKP 4140
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + +P + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAVPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVA 599
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4211 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4265
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4266 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPA-LQGKKVNRVACGSAHTLAWS 4323
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3262 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3316
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3317 RVACGSSHSVAWT 3329
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ I ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNIRQISA 4350
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 149/365 (40%), Gaps = 69/365 (18%)
Query: 21 KDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHT 80
+++ +++ G +D QLG + + L ++S +P I LA G AH
Sbjct: 11 EEEEQQVWSWGAGTDGQLGT--AKLQDELLPQLLSLTSLP--------SISMLACGGAHV 60
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
I +T + FT+G S GQ G G D ++ +G I A G H+ F+
Sbjct: 61 IALTSDGKVFTWGRGSSGQLGHG-----DILNITLPKLVSFFDGYVITQAAAGWSHSGFV 115
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
++SG +++CG G+ GQ G G + TP V E + ++ + L + V
Sbjct: 116 SDSGCLFTCGNGSFGQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLLAGNQVC 174
Query: 201 GWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
G+G+ + GQ+ S+ ++ P V+S K V + +++ G ++ +G +SWG G
Sbjct: 175 GFGSGKRGQLGFTSDGTKSVNLPCVVSGLKDV-EVTRISANGDHSAAISADGQFFSWGRG 233
Query: 258 LLGQGPKVSRSMKPTLIPSTLF---------------------------------GQHQF 284
GP V P +PS+L Q Q
Sbjct: 234 FCA-GPDV---QTPQCLPSSLSFRKVAVGWNHALLLTVDGEVFKLGNTLNKQPEKQQLQI 289
Query: 285 NPKS------------KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
+ KV + AG A+T G + WG ++GQLGLG DQ P
Sbjct: 290 DSSEALLAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQ 349
Query: 333 KVAVG 337
V+VG
Sbjct: 350 LVSVG 354
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 20/276 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + ++G GQ G G D + F ++ L
Sbjct: 9 VAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHG-----DTDDRLFPTKLSAL 63
Query: 123 EGEKIMDAVCGQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G+ I+ CG DHT+ +ESG+ VYS GWG G+ G G ++ P ++ ++G I
Sbjct: 64 DGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKA-LQGLMIQ 122
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ LAV+ V WG ++ G++ + S Q I VA+G
Sbjct: 123 QIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEH 182
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ +G +Y WG YG LG G + R L+P + K+ + G
Sbjct: 183 SVAITKDGNLYGWGWGRYGNLGLGDRNDR-----LLPEKVTVD-----GDKMAMVACGWR 232
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY G +YGQLG G ED P KV
Sbjct: 233 HTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKV 268
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ G H++ L V S G G DGQ G G +++ P + ++G+ I+ ++
Sbjct: 14 RRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSA-LDGQDIICVT 72
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S+ G DV+ WG ++G++ + + P + +G+ I +A G S C
Sbjct: 73 CGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGL-MIQQIACGDSHC 131
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ + V SWG G LG G + + +L+P + Q + ++ + AG
Sbjct: 132 LAVTMDSQVLSWGRNQNGELGLG-----TAEDSLLPQKI----QIFEEIPIKMVAAGAEH 182
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
AIT G+LY WG +YG LGLG D+ P KV V G K
Sbjct: 183 SVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDK 223
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 39/285 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I IACG + T ++ G N + +LG P ++ + F IP
Sbjct: 119 LMIQQIACGDSHCLAVTMDS----QVLSWGRNQNGELGLGTAEDSLLPQKIQI-FEEIP- 172
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
IK +A G H++ IT + + +G +G G G D + +
Sbjct: 173 --------IKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLG-----DRNDRLLPEKVT- 218
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
++G+K+ CG HT+ ++ SG +Y+ GWG GQ G G + P V+ + + I
Sbjct: 219 VDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQA-LSDKFIS 277
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-------SEMQISTPRVLSQCKGVSRIVD 234
++S +A++ G + GWG +++GQI S MQ++ P ++
Sbjct: 278 QVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPH-------DQKVQM 330
Query: 235 VASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPS 276
++ G + + VYSWG G LG G + R++ PT+I +
Sbjct: 331 ISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNV-PTIIEA 374
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 36/330 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH- 65
+ CG T+ ++S ++ G +LG+ D S + IP P+K
Sbjct: 71 VTCGADHTMARSES---GRDVYSWGWGDFGRLGHGD-----------HSDLLIPHPIKAL 116
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
I+ +A G +H + +T + ++G N G+ G G ++ K I E
Sbjct: 117 QGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQK-----IQIFEEI 171
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I G +H++ +T+ G +Y GWG G GLG N++ P V ++G+++ ++
Sbjct: 172 PIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV--TVDGDKMAMVAC 229
Query: 186 AVDCVLAVSDKGDVF--GWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
+ VS G ++ GWG +YGQ+ + + PR + + + SGG
Sbjct: 230 GWRHTICVSSSGGLYTNGWG--KYGQLGHGDFEDHLVPRKVQALS--DKFISQVSGGWRH 285
Query: 243 TM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+M L G + WG+ GQ V + P Q F KV+ + G
Sbjct: 286 SMALTSSGQLLGWGWNKFGQ-IGVGNNFD-CCSPM----QVNFPHDQKVQMISCGWRHTI 339
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T ++Y WG+ GQLG G D+ P
Sbjct: 340 AVTERENVYSWGRGANGQLGNGETIDRNVP 369
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 36/311 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN-EGA 89
G D QLG+ D + P +L I + G HT+ +++
Sbjct: 39 GRGEDGQLGHGDTDDRLFPTKLSAL----------DGQDIICVTCGADHTMARSESGRDV 88
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G D+ H I L+G I CG H L +T +V S
Sbjct: 89 YSWGWGDFGRLGHG-----DHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSW 143
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA-VDCVLAVSDKGDVFGWGNSEYG 208
G +G+ GLG + P + +I E +K+ +A + +A++ G+++GWG YG
Sbjct: 144 GRNQNGELGLGTAEDSLLPQKI--QIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYG 201
Query: 209 QISESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYS--WG-YGLLGQGP 263
+ + R+L + V ++ VA G ++ G +Y+ WG YG LG G
Sbjct: 202 NLGLGD---RNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHG- 257
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ L+P + Q + + G A+T+ G L WG N++GQ+G+G
Sbjct: 258 ----DFEDHLVPRKV----QALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVG 309
Query: 324 TVEDQPFPLKV 334
D P++V
Sbjct: 310 NNFDCCSPMQV 320
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 38/311 (12%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP--LPVKHPSTQIKHLA--TGRA 78
+N K++ CG ++ +LG V V +P LPV H +K +A +G
Sbjct: 1882 QNGKVYACGEGTNGRLGLG-----------VTHNVPLPHQLPVLHQYV-VKKVAVHSGGK 1929
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + +T + F++G G+ G G D + L +KI D CG H+
Sbjct: 1930 HALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-----RLVETLRSKKIRDVACGSSHSA 1984
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDK 196
++ G++Y+ G G G+ G G Q P LV + G R+++++ S LA+++
Sbjct: 1985 AISSQGELYTWGLGEYGRLGHGDNATQLKPKLV-AALAGRRVIQVACGSRDAQTLALTED 2043
Query: 197 GDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G VF WG+ ++G++ + S TP + + G+ ++ + G L G V++WG
Sbjct: 2044 GSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWG 2102
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
Y LG G KP I L G+ +V + G A+T+ G +Y W
Sbjct: 2103 KGDYYRLGHGGD-QHVRKPQPI-GGLRGR-------RVIHVAVGALHCLAVTDAGQVYAW 2153
Query: 313 GKNQYGQLGLG 323
G N +GQ G G
Sbjct: 2154 GDNDHGQQGSG 2164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 114/268 (42%), Gaps = 22/268 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + +G G+ G G D + K H L G + D CG
Sbjct: 3071 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMNVADIACGS 3125
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 3126 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALL-GYRAIDIACGSGDAQTLC 3184
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ ++ V G L G V
Sbjct: 3185 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGAV 3243
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+W G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 3244 YTWSKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDSGE 3294
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+Y WG N GQLG GTV P VA
Sbjct: 3295 VYTWGDNDEGQLGDGTVTAIQRPRLVAA 3322
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 1972 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNATQLKP-KLVAALA----- 2021
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 2022 ----GRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 2072
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 2073 RLSGIGVIQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPI-GGLRGR 2129
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 2130 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2160
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFLT-ESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++GKVY+CG G +G+ GLG +N + P L + + + V + S
Sbjct: 1870 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVV---KKVAVHS 1926
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I DVA G S
Sbjct: 1927 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRS-KKIRDVACGSSHSAA 1985
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ Q S+ +
Sbjct: 1986 ISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLV-AALAGRRVIQVACGSRDAQTL----- 2038
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 2039 --ALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEI 2071
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 2981 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 3037
Query: 206 EYGQISESEMQI-STPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
G++ + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 3038 SGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 3097
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ L G + V + G AIT GH+ WGK +YG+L
Sbjct: 3098 HGNRMSYD-RPKLV-EHLNGMN-------VADIACGSAHSAAITASGHVLTWGKGRYGRL 3148
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 3149 GHGDSEDQLRP 3159
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+ F + G G V K +A L+G+KI+ G
Sbjct: 3230 GSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKK-----VAALQGKKIISIATGSL 3284
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + ++SG+VY+ G +GQ G G + + P LV ++G+ IVK++ LA+S
Sbjct: 3285 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV-AALQGKHIVKVTCGSAHTLALS 3342
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Query: 151 WGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + + I R + ++ + V G V+ G G+
Sbjct: 1837 WGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGR 1896
Query: 210 ISES-EMQISTPRVLSQC-KGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPK 264
+ + P L + V + V V SGG L +G V+SWG G LG G +
Sbjct: 1897 LGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR 1956
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+ KP L+ TL + K+ + G AI++ G LY WG +YG+LG G
Sbjct: 1957 TTLD-KPRLV-ETLRSK-------KIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD 2007
Query: 325 VEDQPFP-LKVAVGGQK 340
Q P L A+ G++
Sbjct: 2008 NATQLKPKLVAALAGRR 2024
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I +ATG H + +D+ +T+G+N GQ G G V +A L+G+ I+
Sbjct: 3275 KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP-----RLVAALQGKHIV 3329
Query: 129 DAVCGQDHTLFLTES 143
CG HTL L+ S
Sbjct: 3330 KVTCGSAHTLALSTS 3344
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 2968 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 3024
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 3025 VTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 3078
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 3079 LTTEGEVYAWGEGEDGKLGHG 3099
>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
AltName: Full=Telophase disk protein of 60 kDa
gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
Length = 522
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 214
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 273
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 333
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 334 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 386
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 387 SQIYAGYTCSF-AVSEVGGLFFWG 409
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 207
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 208 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 260
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 261 CGAEFSMIMDCKGNLYSFGCPEYGQLG 287
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 213
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 214 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 254
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 42/328 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L V IP V S+ + K +A +G H
Sbjct: 3273 KVYACGEATNGRLG----------LGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATA 3322
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3323 LTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3374
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D+G
Sbjct: 3375 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEG 3433
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
VF WG+ ++G++ + + P+ + + G + + G L G+V++WG
Sbjct: 3434 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGK 3492
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G V KP ++ L G+ K+ + G A+T+ G +Y WG
Sbjct: 3493 GDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYAWG 3543
Query: 314 KNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
N +GQ G GT P V + GQK
Sbjct: 3544 DNDHGQQGNGTTTVNRKPTLVHGLEGQK 3571
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 808 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 862
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 863 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 921
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 922 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 980
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 981 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 1018
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3361 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3410
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3411 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3463
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3464 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3522
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L +I VA G S
Sbjct: 3523 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSS 3580
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 3258 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSG 3316
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3317 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3375
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3376 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3427
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3428 -ALTDEGLVFSWGDGDFGKLGRGGSE 3452
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 116/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4298 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4352
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4353 ADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4411
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4412 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4470
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4471 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4521
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4522 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4561
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4350 IEVADVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4400
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4401 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4452
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4453 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4511
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4512 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4568
Query: 240 SACTM 244
SA T+
Sbjct: 4569 SAHTL 4573
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 767 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAA 826
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 827 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 882
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 883 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 931
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 932 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 961
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 4202 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4256
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4257 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4316
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4317 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVADVAAGGAHSACVTA 4367
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4368 AGDLYTWGKGRYGRLGHSDSEDQLKP 4393
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 4214 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4267
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4268 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4326
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ + DVA+GG+ + G +Y+WG YG LG
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLRGI-EVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4385
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4386 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4438
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4439 GGSDGCKVPMKI 4450
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 706 CEGLASLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 751
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAG 811
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 812 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 864
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 865 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 901
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V +P +I ST G+
Sbjct: 756 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVI-STFSGKQA--- 810
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 811 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 859
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4464 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4518
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4519 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4576
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + H LEG+KI
Sbjct: 3519 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVN--RKPTLVHG---LEGQKIT 3573
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3574 RVACGSSHSVAWT 3586
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 39/279 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T I A G+ H + +T + +++GN G+ G G D I L +
Sbjct: 146 PITMIASHADGK-HYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKL-----IESLLDK 199
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS- 184
I+ CG ++ L+ SG++Y+ G G G+ G G+ ++ TP LV ++G +V ++
Sbjct: 200 NIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVT-TLKGHTVVHVAC 258
Query: 185 -SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
S L V+ G VF WG+ +YG++ S TP+++ + ++ +V V GG
Sbjct: 259 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN-VVKVFCGGQFS 317
Query: 243 TMLNDEGLVYSWGYG---LLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
L G VY+WG G LG G PKV S++ K++
Sbjct: 318 AALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLR----------------DKKIKD 361
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLG--LGTVEDQP 329
L G A+T +Y WG+N YGQ+ LG V +P
Sbjct: 362 LSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEP 400
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTI 81
KL+ CG ++ +LG D P + + FV IK +A +G H +
Sbjct: 2642 KLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFV------------IKKVAVHSGGKHAL 2689
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D I L+ ++I D CG H+ +
Sbjct: 2690 ALTQDGKVFSWGEGEDGKLGHGNCISLDKPKL-----IEILKSKRIRDIACGSGHSAAIA 2744
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
+G++Y+ G G G+ G G Q P LV+ + G+R+V+++ S +A++ G V
Sbjct: 2745 SNGELYTWGLGEYGRLGHGDTITQTRPKLVQALV-GQRVVQVACGSRDAQTMALTTDGCV 2803
Query: 200 FGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
+ WG+ ++G++ TP + + G+ ++ V G L G V++WG
Sbjct: 2804 YSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLG-VIQVECGAQFSLALTKYGEVWTWGKGD 2862
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Y LG G KPTL+ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 2863 YFRLGHGND-HHVRKPTLVEG-LRGK-------KIIHVAVGALHCLAVTDTGQVYAWGDN 2913
Query: 316 QYGQLGLG 323
+GQ G G
Sbjct: 2914 DHGQQGNG 2921
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG NN + P L + I+ V + S
Sbjct: 2627 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKK---VAVHS 2683
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + P+++ K RI D+A G
Sbjct: 2684 GGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKS-KRIRDIACGSGHSAA 2742
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G ++++ +P L+ + L GQ +V + G
Sbjct: 2743 IASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQA-LVGQ-------RVVQVACGSRDAQ 2793
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G +Y WG +G+LG G + PL V
Sbjct: 2794 TMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAV 2828
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + N +L+ GL +LG+ D + P +LV + V
Sbjct: 2729 RIRDIACGSGHSAAIAS----NGELYTWGLGEYGRLGHGDTITQTRP-KLVQALV----- 2778
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T + +++G+ FG+ GRG G + +
Sbjct: 2779 ----GQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG-----GSDGCYTPLAVD 2829
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G + G+
Sbjct: 2830 RLNGLGVIQVECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-LRGK 2886
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
+I+ ++ LAV+D G V+ WG++++GQ
Sbjct: 2887 KIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 2917
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ G VYS G G G+ G G + + P L+ ++ + IV ++ A+S
Sbjct: 158 HYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLD-KNIVFIACGSTYSAALSA 216
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + TP +++ KG + +V VA SG S + G+V+
Sbjct: 217 SGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHT-VVHVACGSGDSQTLCVTASGIVF 275
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T G +
Sbjct: 276 SWGDGDYGKLGRG-GTDGSKTPKIVDKLL--------DINVVKVFCGGQFSAALTAHGEV 326
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
Y WGK +LG G+ E +P
Sbjct: 327 YTWGKGDAYRLGHGSEEHVRYP 348
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ H+A +G + T+ +T + F++G+ +G+ GRG G + L +
Sbjct: 253 VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG-----GTDGSKTPKIVDKLLDINV 307
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG + LT G+VY+ G G + G G + P ++ + ++I LS
Sbjct: 308 VKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-LRDKKIKDLSVGT 366
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+LA+++ V+GWG ++YGQI + + + L ++ +ASG
Sbjct: 367 THILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASG 417
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKL 183
E + + V Q T + VY WG + + LG L + + E+ + + + +
Sbjct: 2570 EVLQEQVAIQRSTDTPPQQSAVYV--WGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHI 2627
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLS-QCKGVSRIVDVASGGSA 241
+ + VS +G ++ G G++ + + P+ + + V + V V SGG
Sbjct: 2628 AGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKH 2687
Query: 242 CTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L +G V+SWG G LG G +S KP LI + ++ + G
Sbjct: 2688 ALALTQDGKVFSWGEGEDGKLGHGNCISLD-KPKLI--------EILKSKRIRDIACGSG 2738
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
AI + G LY WG +YG+LG G Q P L A+ GQ+
Sbjct: 2739 HSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQR 2781
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQ 283
K ++ I A G + D G VYSWG G LG G VS +P LI S L
Sbjct: 145 KPITMIASHADGKHYLALTQD-GCVYSWGNGDGGRLGHGDTVSYD-EPKLIESLLDKNIV 202
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
F + G A++ G LY WG+ YG+LG G +D P V
Sbjct: 203 F--------IACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLV 245
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T + +A G H++ + + + +G N +GQ G G + + N+ +
Sbjct: 117 TGVVAIAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQ--VKNLTGVVAVAA 174
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
H+L L G V++ G+ GQ G G N+ TP V+ + G +V +++
Sbjct: 175 GGG-----HSLALKSDGTVWAWGYNGYGQLGDGTTMNRYTPVQVQ-NLTG--VVAIAAGS 226
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA+ G V+ WGN+ YGQ+ + T V + +G++ +V +A+G L
Sbjct: 227 SHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPV--RVQGLTDVVAIAAGNEHSLALKS 284
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+G V++WG+ G LG G +R + Q + V ++ AG A+
Sbjct: 285 DGTVWTWGWNYSGQLGDGTTTNR-----------YTPVQVQNLTGVVAIAAGGGHSLALK 333
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G ++ WG N +G+LG GT D+ P++V+
Sbjct: 334 SDGTVWAWGNNDWGELGDGTRTDRHTPVQVS 364
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 29/279 (10%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P+PV++ T + + G +++ + + + +G+N +GQ G G ++ +
Sbjct: 60 PVPVQN-LTGVVAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTN-----RYTPVQV 113
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+L G ++ G H+L L G V++ G+ GQ G G + N+ TP V+
Sbjct: 114 QNLTG--VVAIAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVV- 170
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+++ LA+ G V+ WG + YGQ+ + + M TP Q + ++ +V +A+G
Sbjct: 171 --AVAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTTMNRYTPV---QVQNLTGVVAIAAG 225
Query: 239 GSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
S L +G V++W GYG LG G +R+ P + G + V ++ A
Sbjct: 226 SSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTT-----PVRVQG------LTDVVAIAA 274
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A+ + G ++ WG N GQLG GT ++ P++V
Sbjct: 275 GNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQV 313
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 31/157 (19%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
VK+++ LA+ G V+ WG TP + GV V V +G
Sbjct: 35 VKIAAGGARSLAIKSDGTVWAWGG--------------TPVPVQNLTGV---VAVEAGSF 77
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G V++WG YG LG G +R + Q + V ++ AG
Sbjct: 78 YSLALKSDGTVWAWGDNYYGQLGDGTTTNR-----------YTPVQVQNLTGVVAIAAGG 126
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ + G ++ WG N YGQLG GT+ ++ P++V
Sbjct: 127 GHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQV 163
>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
Length = 400
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 122/281 (43%), Gaps = 19/281 (6%)
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I +A G ++ G +FG +G G G + I L+ EK
Sbjct: 37 VRIVQVAAGGGQLDLMLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEK 96
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSS 185
++ G+ H+ +T G VY+ G G GQ GLG P V G +E E + +S
Sbjct: 97 VICVSAGELHSGCVTADGDVYTWGEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSC 156
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR-----VLSQCKGVSRIVDVASGGS 240
L V+++G+VF WG YG + + + P L G R V V++G
Sbjct: 157 GCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHR 216
Query: 241 ACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKS-KVESLIAG 296
+L++ G +Y++G G LG G V + ++ QF + ++ + AG
Sbjct: 217 HSMVLDEHGGLYTFGSGASGALGHGDLVGQEFPVKVM--------QFEENNVRIHQMSAG 268
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
A++ G +Y WGK + G++GLG D P KV VG
Sbjct: 269 VDMSMAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRKVDVG 309
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 202 WGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACT-MLNDEGLVYSWG--- 255
WG ++ GQ + + +S P++L G RIV VA+GG ML G V S+G
Sbjct: 7 WGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFGTAQ 66
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
YG LG G + + L P + KV + AG G +T G +Y WG+
Sbjct: 67 YGALGHGYDAGKQLSDCLRPRYI----DALKNEKVICVSAGELHSGCVTADGDVYTWGEG 122
Query: 316 QYGQLGLGTVEDQPFPLKVAVGG 338
GQLGLG P +V +GG
Sbjct: 123 FCGQLGLGDRRPHLLPEQVTLGG 145
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVIQMSCGFKHSA 4151
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4152 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4210
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4211 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4269
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4270 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4321
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P + V
Sbjct: 4322 NSEGQLGLGHTNHVREPTLITV 4343
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ ++++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ ++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVS 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AVS+ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4021 VMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4075
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4076 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4134
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE ++++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4135 LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4191
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4192 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4244
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4245 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4291
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S GV+ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4245 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4299
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P L+ ++G+ I ++S+
Sbjct: 4300 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLI-TVLQGKNIRQISA 4354
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ G LY WG+ +G+LG G + P V
Sbjct: 526 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 4000 KCDVYLWGAGRHGQLAEAGRNVMIP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4056
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4057 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4107
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4108 FSWGDGDYGKLGHGNSDRQRRPRQI 4132
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 21/147 (14%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGL 250
VS+ +V+ WG++ Q+ E ++ +I P++ I G CT +++ +G
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTI----EAGQYCTFVISTDGS 423
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AIT 304
V + G YG LG G ++S L F P ++ + + + G A T
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLT---------FEPHRSIKKVSSSKGSDGHTLAFT 474
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G ++ WG YG+LG G Q +P
Sbjct: 475 TEGEVFSWGDGDYGKLGHGNSSTQKYP 501
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4140
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4141 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4199
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4200 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4258
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4259 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4310
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4311 NSEGQLGLG 4319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4010 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4064
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4065 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4123
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4124 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4180
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4181 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4231
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4232 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4280
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4234 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4288
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4289 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4343
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ I ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNIRQISA 4350
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP--LPVKHPSTQIKHLA--TGRAHTI 81
K++ CG ++ +LG V V +P LPV H +K +A +G H +
Sbjct: 785 KVYACGEGTNGRLGLG-----------VTHNVPLPHQLPVLHQYV-VKKVAVHSGGKHAL 832
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D + L +KI D CG H+ ++
Sbjct: 833 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAIS 887
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
G++Y+ G G G+ G G Q P LV + G R+V+++ S LA+++ G V
Sbjct: 888 SQGELYTWGLGEYGRLGHGDNATQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAV 946
Query: 200 FGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
F WG+ ++G++ + S TP + + G+ +V + G L G V++WG
Sbjct: 947 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGKGD 1005
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Y LG G KP I L G+ +V + G A+T+ G +Y WG N
Sbjct: 1006 YYRLGHGGD-QHVRKPQPI-GGLRGR-------RVIHVAVGALHCLAVTDAGQVYAWGDN 1056
Query: 316 QYGQLGLG 323
+GQ G G
Sbjct: 1057 DHGQQGSG 1064
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + +G G+ G G D + K H L G + D CG
Sbjct: 1891 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMSVADIACGS 1945
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 1946 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL-GYRAIDIACGSGDAQTLC 2004
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ +V V G L G V
Sbjct: 2005 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGAV 2063
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+WG G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 2064 YTWGKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDSGE 2114
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+Y WG N GQLG GTV P VA
Sbjct: 2115 VYTWGDNDEGQLGDGTVTAIQRPRLVAA 2142
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 872 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNATQLKP-KLVTALA----- 921
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 922 ----GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 972
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 973 RLSGIGVVQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPI-GGLRGR 1029
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 1030 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 1060
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++ GKVY+CG G +G+ GLG +N + P L + + + V + S
Sbjct: 770 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVV---KKVAVHS 826
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I DVA G S
Sbjct: 827 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRA-KKIRDVACGSSHSAA 885
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ Q S+ +
Sbjct: 886 ISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLV-TALAGRRVVQVACGSRDAQTL----- 938
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 939 --ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 971
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG-N 204
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 1801 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 1857
Query: 205 SEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
S + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 1858 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 1917
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ N S V + G AIT GH+ WGK +YG+L
Sbjct: 1918 HGNRMSYD-RPKLV-------EHLNGMS-VADIACGSAHSAAITASGHVLTWGKGRYGRL 1968
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 1969 GHGDSEDQLRP 1979
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+ DIACG G + D N+ +G G G D K LP
Sbjct: 1989 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCK---------------LP 2033
Query: 63 VKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
K S + + G ++ +T + +T+G F + G G V K +
Sbjct: 2034 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK-----V 2088
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
A L+G+KI+ G H + ++SG+VY+ G +GQ G G + + P LV ++G+
Sbjct: 2089 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV-AALQGKH 2147
Query: 180 IVKLSSAVDCVLAVS 194
IVK++ LA+S
Sbjct: 2148 IVKVTCGSAHTLALS 2162
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG F+V TKS ++ G +LG+ + VR P V
Sbjct: 2044 VVKVECGSQFSVALTKSG----AVYTWGKGDFHRLGHGS-----------VDHVRRPKKV 2088
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+I +ATG H + +D+ +T+G+N GQ G G V +A L
Sbjct: 2089 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP-----RLVAAL 2143
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
+G+ I+ CG HTL L+ S
Sbjct: 2144 QGKHIVKVTCGSAHTLALSTS 2164
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 1788 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 1844
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 1845 VTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 1898
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 1899 LTTEGEVYAWGEGEDGKLGHG 1919
>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
Length = 333
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 16 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 70
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 71 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 129
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 130 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 189
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 190 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 242
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 243 SQIYAGYTCSF-AVSEVGGLFFWG 265
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGV 229
RG + R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+
Sbjct: 2 TRGRV---RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGL 55
Query: 230 SR--IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
S IV A G + L + G V+++G +GQ + + +PS + P
Sbjct: 56 SHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPI 112
Query: 288 SKVESLIAGPCTFGAITNF-GHLYMWGKNQYGQLG 321
+K +A F I + G+LY +G +YGQLG
Sbjct: 113 TK----MACGAEFSMIMDCKGNLYSFGCPEYGQLG 143
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQ 281
+ +G R V S + ++ EG ++SWG G LG G R P LI
Sbjct: 1 RTRGRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---S 56
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
H+ + S G A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 57 HEV-----IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 110
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 34/307 (11%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTIVI 83
KL+ CG ++ +LG D G P P+P IK +A +G H + +
Sbjct: 2975 KLYACGEGTNGRLGLGDNNNVGEPK---------PIPFLSQYI-IKKVAVHSGGKHALAL 3024
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
T + F++G G+ G G D I L+ ++I D CG H+ + +
Sbjct: 3025 TQDGKVFSWGEGEDGKLGHGNRVSLDKP-----RLIEALKSKRIRDIACGSGHSAAIASN 3079
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFG 201
G++Y+ G G G+ G G P LV + G+R+++++ S +A+++ G V+
Sbjct: 3080 GELYTWGLGEYGRLGHGDTTTHLKPKLVDALV-GQRVIQVACGSRDAQTMALTEDGSVYS 3138
Query: 202 WGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG+ ++G++ +P + + G+ +V V G L G V++WG Y
Sbjct: 3139 WGDGDFGKLGRGGSDGCYSPLPVDRLNGLG-VVQVECGAQFSLALTKYGEVWTWGKGDYF 3197
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G +PTL+ L G+ KV + G A+T+ G +Y WG N +
Sbjct: 3198 RLGHGND-HHVRRPTLVEG-LRGK-------KVVHVAVGALHCLAVTDAGQVYAWGDNDH 3248
Query: 318 GQLGLGT 324
GQ G G+
Sbjct: 3249 GQQGNGS 3255
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG NN + P L + I+ V + S
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKK---VAVHS 3016
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + + PR++ K RI D+A G
Sbjct: 3017 GGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKS-KRIRDIACGSGHSAA 3075
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G + +KP L+ L GQ +V + G
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTH-LKPKLV-DALVGQ-------RVIQVACGSRDAQ 3126
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G +Y WG +G+LG G + PL V
Sbjct: 3127 TMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPV 3161
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 24/270 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G +I
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKL-----IEALLGTEI 4035
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D CG H+ ++ +G +Y+ G G G+ G G ++Q P +V ++G +++ ++ S
Sbjct: 4036 VDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTA-LQGYKVIDVACGS 4094
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L V+D +V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4095 GDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VVKVECGSQFSVA 4153
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + S L G+ K+ S+ G
Sbjct: 4154 LTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKV-SALQGK-------KIVSIATGSLHCV 4204
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A ++ G +Y WG N GQLG GT Q P
Sbjct: 4205 ACSDKGEVYTWGDNDEGQLGDGTTHAQQSP 4234
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 35/332 (10%)
Query: 18 TKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATG 76
T S D + ++G G N QLG + K V++PLP + S + LA G
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAK-----------VKLPLPCESLSALRPIQLAGG 3935
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
+T + + G + G+ G G V + +I + +K+ G H
Sbjct: 3936 EQTLFAVTADGKVYATGYGALGRLGTGGV--DSVMVPTLLESIQHVFIKKVA-VNSGGKH 3992
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
L L+ G VYS G G DG+ G G+ + P L+ + G IV ++ A+S
Sbjct: 3993 CLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALL-GTEIVDIACGGHHSAAISSA 4051
Query: 197 GDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEGLVY 252
G ++ WG YG++ +S+ Q+ P V++ +G +++DVA G G A T+ + D+ V+
Sbjct: 4052 GWLYTWGKGRYGRLGHGDSDDQLK-PTVVTALQGY-KVIDVACGSGDAQTLCVTDDDNVW 4109
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S K + +L G KVE G A+T G +
Sbjct: 4110 SWGDGDYGKLGRGG--SDGCKVPMKIESLAGLGVV----KVE---CGSQFSVALTRSGAV 4160
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
Y WGK Y +LG GT + P KV A+ G+K
Sbjct: 4161 YTWGKGDYHRLGHGTDDHVRRPRKVSALQGKK 4192
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 32/245 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + N +L+ GL +LG+ D P +LV + V
Sbjct: 3062 RIRDIACGSGHSAAIAS----NGELYTWGLGEYGRLGHGDTTTHLKP-KLVDALV----- 3111
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-- 118
++ +A G A T+ +T++ +++G+ FG+ GRG G C++
Sbjct: 3112 ----GQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRG--------GSDGCYSPL 3159
Query: 119 -IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEI 175
+ L G ++ CG +L LT+ G+V++ WG LGH N+ P LV G +
Sbjct: 3160 PVDRLNGLGVVQVECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRRPTLVEG-L 3216
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
G+++V ++ LAV+D G V+ WG++++GQ ++ L +++ V
Sbjct: 3217 RGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRV 3276
Query: 236 ASGGS 240
A G S
Sbjct: 3277 ACGSS 3281
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET----PCLVRGEIEGERIVKLSSAVDC 189
+D TL SG +Y GWG + + LG L + PC + R ++L+
Sbjct: 3884 EDWTLSWDGSGAIY--GWGHNHRGQLGGLEGAKVKLPLPC---ESLSALRPIQLAGGEQT 3938
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLND 247
+ AV+ G V+ G G++ + + P +L + V + V V SGG C L+
Sbjct: 3939 LFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS 3998
Query: 248 EGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
EG VYSWG G LG G +++ +P LI + L +++ + G AI+
Sbjct: 3999 EGHVYSWGEGDDGKLGHGNRITYD-RPKLIEALL--------GTEIVDIACGGHHSAAIS 4049
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+ G LY WGK +YG+LG G +DQ P V A+ G K
Sbjct: 4050 SAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYK 4086
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +TD++ +++G+ +G+ GRG G I L G ++ CG
Sbjct: 4094 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-----GSDGCKVPMKIESLAGLGVVKVECGS 4148
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
++ LT SG VY+ G G + G G ++ P V ++G++IV +++ +A S
Sbjct: 4149 QFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSA-LQGKKIVSIATGSLHCVACS 4207
Query: 195 DKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGS 240
DKG+V+ WG+++ GQ+ + +PR++ +G I VA G +
Sbjct: 4208 DKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQG-KNITRVACGSA 4253
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK-LSSAVDCVLAVS 194
H L LT G VYS G G G+ G G + + P ++ E+ +R V ++ A+S
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVI--EVLSDRTVTYIACGSTYSAAIS 569
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLV 251
G++ WG YG++ IS P V++ G + + VA SG S + + G+V
Sbjct: 570 STGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHT-VTHVACGSGDSQTLCVTNSGIV 628
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+SWG YG LG+G S K I L Q+ V + G A+T G
Sbjct: 629 FSWGDGDYGKLGRGG--SDGSKLPKIVDKLLDQN-------VVKVFCGGQFSAALTAHGE 679
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
+Y WGK + +LG G E FP
Sbjct: 680 VYTWGKGDHYRLGHGNEEHVRFP 702
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 38/266 (14%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQD 135
H + +T +++GN G+ G G + C I L + CG
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHG--------DSFSCDEPQVIEVLSDRTVTYIACGST 563
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAV 193
++ ++ +G++ + G G+ G+ G G ++ P +V + G + ++ S L V
Sbjct: 564 YSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTA-LNGHTVTHVACGSGDSQTLCV 622
Query: 194 SDKGDVFGWGNSEYGQISE-----SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
++ G VF WG+ +YG++ S++ ++L Q +V V GG L
Sbjct: 623 TNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQ-----NVVKVFCGGQFSAALTAH 677
Query: 249 GLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VY+WG G LG G + + P + G KV L G AIT
Sbjct: 678 GEVYTWGKGDHYRLGHGNE-----EHVRFPKLVEGLRN----KKVRDLSVGNLHILAITE 728
Query: 306 FGHLYMWGKNQYGQL--GLGTVEDQP 329
+Y WG+N Q+ LG V +P
Sbjct: 729 DQLVYGWGRNDACQIDPSLGAVVSEP 754
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ H+A +G + T+ +T++ F++G+ +G+ GRG G + L + +
Sbjct: 607 VTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRG-----GSDGSKLPKIVDKLLDQNV 661
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSS 185
+ CG + LT G+VY+ WG LGH N + P LV G + +++ LS
Sbjct: 662 VKVFCGGQFSAALTAHGEVYT--WGKGDHYRLGHGNEEHVRFPKLVEG-LRNKKVRDLSV 718
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISES 213
+LA+++ V+GWG ++ QI S
Sbjct: 719 GNLHILAITEDQLVYGWGRNDACQIDPS 746
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D ++P+
Sbjct: 4086 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKVPMK 4132
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ + + + G ++ +T + +T+G + + G G +D+ + ++
Sbjct: 4133 IESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT---DDHVRR--PRKVSA 4187
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + ++ G+VY+ G +GQ G G + Q++P LV ++G+ I
Sbjct: 4188 LQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHA-LQGKNIT 4246
Query: 182 KLSSAVDCVLAVS 194
+++ LA S
Sbjct: 4247 RVACGSAHTLAWS 4259
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 232 IVDVAS--GGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +AS G L +G+VYSWG G LG G S +P +I +
Sbjct: 501 VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD-EPQVI--------EVLS 551
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V + G AI++ G L WG+ YG+LG G +D P V
Sbjct: 552 DRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVV 599
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4146
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4205
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4264
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P +P L G +E + G A+ + G +Y WG
Sbjct: 4265 DRLIGLPEGRARNHNRPQQVP-VLAG-------VVIEDVAVGAEHTLALASTGDVYAWGS 4316
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4317 NSEGQLGLGHTNHVREPTLVTV 4338
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4016 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4070
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4071 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4129
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4130 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4186
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4187 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P +V V
Sbjct: 4240 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPV 4286
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4240 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQVPVLAGVVIED 4294
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4295 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4349
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3995 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4051
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4052 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4102
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4103 FSWGDGDYGKLGHGNSDRQRRPRQI 4127
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAGM-------IIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGMIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4350
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|321478150|gb|EFX89108.1| hypothetical protein DAPPUDRAFT_304662 [Daphnia pulex]
Length = 353
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 140/353 (39%), Gaps = 64/353 (18%)
Query: 25 LKLFGCGLNSDSQLGYHDPRKKGNPLEL--VMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
++LF G NS QLG +G EL V + IP ++ +A G H+IV
Sbjct: 1 MQLFTWGTNSHGQLG------QGFESELLSVPTAAHIPEELQQSIAYNCQIAGGGNHSIV 54
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
T N + G ++ GQ I E F I L G + CG D TLFL
Sbjct: 55 -TSNGRVWAAGLDNSGQ----ICSTEKKSASVFSE-IHALAGCNVTSVACGWDFTLFLAS 108
Query: 143 SGKVYSCGWGADGQTG-----------LGHLNNQ----------------ETPCL----- 170
+G +Y CG Q G L L+++ T CL
Sbjct: 109 NGNLYGCGSNTFHQLGITNKVVNGLINLHSLDHEPFVQVSAGLRHAAAVTNTGCLQIWGI 168
Query: 171 ---VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLS 224
V+ + +VK S ++A++ K + WG + +GQ S + I P +
Sbjct: 169 EKYVKQLTDVSGVVKASCGQRHIVALTTKNKLLAWGGNNHGQCGQNSTTTKHIKEPLSIE 228
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS--RSMKPTLIPSTLFGQH 282
+ RI +V SG + +L D VYSWG GQ + S S P IP
Sbjct: 229 WDESNGRIENVVSGWTHSLVLTDRQQVYSWGRNTYGQLGRASYDNSFLPKRIPEL----- 283
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + AG A+ FG L+ WG N++G LG G E+Q P+ ++
Sbjct: 284 -----EGITLIAAGSEHSMALDKFGQLWTWGWNEHGSLGNGNTENQFRPVNIS 331
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 45/287 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+T +ACG+ FT+ N L+GCG N+ QLG + ++V + +
Sbjct: 92 NVTSVACGWDFTLFLAS----NGNLYGCGSNTFHQLGITN--------KVVNGLINLHSL 139
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P Q+ + G H +T N G GI + + + D+
Sbjct: 140 DHEPFVQV---SAGLRHAAAVT-NTGCLQI---------WGIEK--------YVKQLTDV 178
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ--ETPCLVRGEIEGERI 180
G ++ A CGQ H + LT K+ + G GQ G + + P + + RI
Sbjct: 179 SG--VVKASCGQRHIVALTTKNKLLAWGGNNHGQCGQNSTTTKHIKEPLSIEWDESNGRI 236
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
+ S L ++D+ V+ WG + YGQ+ + S P+ + + +G++ I A+G
Sbjct: 237 ENVVSGWTHSLVLTDRQQVYSWGRNTYGQLGRASYDNSFLPKRIPELEGITLI---AAGS 293
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
L+ G +++WG+ G LG G +P I G+ Q
Sbjct: 294 EHSMALDKFGQLWTWGWNEHGSLGNG-NTENQFRPVNISHYFPGRIQ 339
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP PS L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 758
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3011 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3058
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3059 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3110
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3111 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3169
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3170 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3228
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3229 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYA 3279
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3309
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3099 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3148
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3149 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3201
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3202 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3260
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3261 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3318
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 4048 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSAC 4106
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4107 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 4164
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4165 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4215
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4216 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4244
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4040 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGTEV 4094
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4095 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4153
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4154 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4212
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4213 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4263
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4264 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4303
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2996 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3054
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3055 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3113
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3114 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3165
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3166 -ALTDEGLVFSWGDGDFGKLGRGGSE 3190
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3944 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTL 3998
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3999 FAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4058
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G ++V + AG +T
Sbjct: 4059 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------TEVVDVAAGGAHSACVTA 4109
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4110 AGDLYTWGKGRYGRLGHSDSEDQLKP 4135
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSV---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4093 EVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ----- 4142
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H + +G A T+ +TD++ +++G+ +G+ GRG G I L
Sbjct: 4143 -GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDSL 4195
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4196 TGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIA 4254
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ + S+ G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + GSA
Sbjct: 4255 IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACGSA 4312
Query: 242 CTM 244
T+
Sbjct: 4313 HTL 4315
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4206 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4260
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + +E G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4261 HCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4318
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3257 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3311
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3312 RVACGSSHSVAWT 3324
>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
Length = 520
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 212
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 213 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 271
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 331
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 332 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 384
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 385 SQIYAGYTCSF-AVSEVGGLFFWG 407
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 149 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 205
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 206 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 258
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 259 CGAEFSMIMDCKGNLYSFGCPEYGQLG 285
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 160
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 211
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 212 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 252
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 144/339 (42%), Gaps = 44/339 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CG + + D N+ ++G G G+ +P FV P P
Sbjct: 112 ISCGLFHSALLV---DGNIWIWGKGDGGRLGFGHENP-----------VFVPTLNPNLDP 157
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ K +A G H++ +T FT+G FG G + Y + + + EK
Sbjct: 158 A---KCVALGGVHSVALTSLGQVFTWGYGGFGALGHCV-----YHRELLPRLVQGISNEK 209
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I HT +TE+G+VY+ WG D G L P G ++ L+
Sbjct: 210 IRHIATSGTHTAAITETGEVYT--WGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVP 267
Query: 187 VDCVL-------AVSDKGDVFGWG-NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
V V ++++G ++ WG NS Y ++ P+ + +GV R++ +ASG
Sbjct: 268 VAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGV-RVIQIASG 326
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L DEG V SWG+G GQ P + P +I + +V + G
Sbjct: 327 GYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDAL--------ADQRVVYIACG 378
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGL-GTVEDQPFPLKV 334
T AIT+ G LYMWG + QLG+ G E QP P++V
Sbjct: 379 GSTSAAITDEGKLYMWGNAKDSQLGVPGLPEVQPCPVEV 417
>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
Length = 523
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 161 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 215
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 216 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 274
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 275 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 334
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 335 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 387
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 388 SQIYAGYTCSF-AVSEVGGLFFWG 410
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 152 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 208
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 209 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 261
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 262 CGAEFSMIMDCKGNLYSFGCPEYGQLG 288
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 104 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 163
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 164 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 214
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 215 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 255
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 3013 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 758
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4095
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4154
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4214 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4304
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4143
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4144 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4195
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4196 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4254
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4255 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4311
Query: 240 SACTM 244
SA T+
Sbjct: 4312 SAHTL 4316
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3957 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4010
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4069
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4129 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4182 GGSDGCKVPMKI 4193
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3945 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3999
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4110
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKP 4136
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4261
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4319
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDQGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGVNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V +AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQV---VAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CG+N+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGVNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 83 ---DQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRL----IQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+ + A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH---EREGNKPE----QIGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + V +GG+ L
Sbjct: 148 HCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVVAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4114
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4115 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4173
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4174 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4232
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4233 DRLIGLPEGRARNHNRPQQIP-VLAG-------VVIEDVAVGAEHTLALASNGDVYAWGS 4284
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4285 NSEGQLGLGHTNHVREPTLVTV 4306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 3984 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4038
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4039 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4097
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4098 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4154
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4155 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4207
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4208 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4254
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4208 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVVIED 4262
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV ++G+ I ++S+
Sbjct: 4263 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNIRQISA 4317
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P + S+ V G + ++ G V + G
Sbjct: 3963 KCDVYLWGAGRHGQLAEAGRNVMVP---AAAPSFSQAQQVICGQNCTFVIQANGTVLACG 4019
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4020 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4070
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4071 FSWGDGDYGKLGHGNSDRQRRPRQI 4095
>gi|22202709|dbj|BAC07367.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
Length = 421
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 75/335 (22%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G AH I +T + FT+G + GQ G G V+ + + E I
Sbjct: 52 VSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPHPKL-----VKFFENYMITC 106
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G +H+ F T+SG+++ CG G+ GQ G G + + P V + +V+L+ +
Sbjct: 107 VSAGWNHSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLPFEV-AYFTTKHVVRLALGMRH 165
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLS---QCKGVSRIVDVASGGSACT 243
L + V+G+G++ GQI + ++ PR++ CK I ++ + G
Sbjct: 166 SLVLLKDNSVYGFGSTRRGQIGRCTRNQKFYDVPRIIDGFPDCK----IGNIYANGDHSA 221
Query: 244 MLNDEGLVYSWGYGLLGQ-----------------------------------GPKVSRS 268
L++ G +Y WG L+G+ G R
Sbjct: 222 ALDESGQLYIWGRALIGEHDDDQPRPVFPSLGISQVALGWHHALVLSGELYTIGAYRHRK 281
Query: 269 MKPTLIPSTLFGQHQFNPKSK---------VESLIAGPCTFG--------------AITN 305
+ P ++PS Q + NP + +L+ PC G ++T+
Sbjct: 282 LDPHVLPSAEPVQ-RLNPATTSHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTD 340
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G ++ WG ++GQLGLG DQ P +V +G ++
Sbjct: 341 KGTVFTWGWGEHGQLGLGDTCDQVTPQRVNIGDKR 375
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 3013 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 758
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4095
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4154
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4214 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4304
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4143
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4144 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4195
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4196 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4254
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4255 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4311
Query: 240 SACTM 244
SA T+
Sbjct: 4312 SAHTL 4316
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3957 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4010
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4069
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4129 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4182 GGSDGCKVPMKI 4193
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3945 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3999
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4110
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKP 4136
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4261
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4319
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP PS L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 758
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3013 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 4050 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSAC 4108
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 4166
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4167 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4217
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4246
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGTEV 4096
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4097 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4156 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4214
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4215 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4265
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4266 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4305
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3946 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTL 4000
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G ++V + AG +T
Sbjct: 4061 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------TEVVDVAAGGAHSACVTA 4111
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKP 4137
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSV---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4095 EVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ----- 4144
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H + +G A T+ +TD++ +++G+ +G+ GRG G I L
Sbjct: 4145 -GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDSL 4197
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4198 TGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIA 4256
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ + S+ G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + GSA
Sbjct: 4257 IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACGSA 4314
Query: 242 CTM 244
T+
Sbjct: 4315 HTL 4317
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4262
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + +E G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4263 HCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4320
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 51/319 (15%)
Query: 54 MSFVRIPLPVK---HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
M+ P PV + ++ +A GR H+I +T N G +++G+N +GQ G G + Y
Sbjct: 832 MTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTN-GVYSWGSNHYGQLGTGRRGQAPY 890
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL 170
+ L E I+ GQ H+L ++ SG++++ GWG GQ G G +++ E P L
Sbjct: 891 PML-----VDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKPKL 945
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGV 229
++ +E E I+ + ++ G VF +G+ +GQ+ S +I++P +
Sbjct: 946 LKS-LENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYGLPEP 1004
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYG-----LLGQGPKVSRS---------------- 268
+ + A + L+D G +Y+WG Q K +R+
Sbjct: 1005 IKCIYTAYFHNLA--LSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEID 1062
Query: 269 ----------MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
+ PTL+ ++ F + G I+ G LY WG N G
Sbjct: 1063 ALTADDGLLHLSPTLVDTSHISGDIFQ-------MCCGCHHSAVISTTGQLYTWGLNLDG 1115
Query: 319 QLGLGTVEDQPFPLKVAVG 337
QLG+ + ++ P VG
Sbjct: 1116 QLGVSGIRERLVPTVTLVG 1134
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 23/258 (8%)
Query: 63 VKHPSTQIKH---LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK---WFC 116
V +I+H L G AH I N +T+G++S+G G G + WF
Sbjct: 787 VSDSENEIEHKSSLGAGWAHAAHIR-NHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFV 845
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ + ++ CG++H++ LT +G VYS G GQ G G P LV +
Sbjct: 846 YIRVE-----VIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTGRRGQAPYPMLV-DSLS 898
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDV 235
E IV +S+ LA+S G ++ WG YGQ+ + P++L + I+
Sbjct: 899 NELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLEN-ENIISA 957
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G S +L G V+++G G GQ S + + +P ++G + ++ +
Sbjct: 958 YGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVP--VYGLPE-----PIKCIYT 1010
Query: 296 GPCTFGAITNFGHLYMWG 313
A+++ G LY WG
Sbjct: 1011 AYFHNLALSDVGRLYTWG 1028
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 199 VFGWGNSEYG--QISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLVYSWG 255
++ WG+S YG + + +TP +S + ++ VA G + L G VYSWG
Sbjct: 815 LYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWG 873
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LG G + ++ P L+ S + S+ AG AI+ G L+ W
Sbjct: 874 SNHYGQLGTGRR-GQAPYPMLVDSL--------SNELIVSVSAGQYHSLAISASGQLWTW 924
Query: 313 GKNQYGQLGLGTVED 327
G YGQLG G ++D
Sbjct: 925 GWGVYGQLGHGAIDD 939
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+Y+WG YG LG GP ++++ P P + F + +V + G A+T G
Sbjct: 815 LYTWGHSSYGCLGVGPHMTKTATPN--PVSWF----VYIRVEVIQVACGRNHSIALTTNG 868
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+Y WG N YGQLG G P+P+ V
Sbjct: 869 -VYSWGSNHYGQLGTGRRGQAPYPMLV 894
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 86/238 (36%), Gaps = 54/238 (22%)
Query: 10 GYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ 69
GY +++ T N K+F G S QLG K + P+PV
Sbjct: 960 GYSHSIILTS----NGKVFTFGSGSFGQLGNGSTTK-----------ITSPVPVYGLPEP 1004
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK + T H + ++D +T+G S Q R Q + N D + +D
Sbjct: 1005 IKCIYTAYFHNLALSDVGRLYTWG--SSPQVLRFHAQSQKRARNQLVLNEGDQADDAEID 1062
Query: 130 AV---------------------------CGQDHTLFLTESGKVYSCGWGADGQTGLGHL 162
A+ CG H+ ++ +G++Y+ G DGQ G+ +
Sbjct: 1063 ALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGI 1122
Query: 163 NNQETPCLV----------RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+ P + G I ++ D LA+ ++GWG++ GQ+
Sbjct: 1123 RERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAANKLWGWGSNHEGQL 1180
>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
africana]
Length = 523
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 161 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----KLIEGLSHEVIVSAACGRNHT 215
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 216 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 274
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 275 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 334
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 335 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 387
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 388 SQIYAGYTCSF-AVSEVGGLFFWG 410
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 104 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCXSGVRVRTVVSGSCAAHS 163
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 164 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPKLIEGL---SHEV-----IVSAACGRNH 214
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 215 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 255
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ P+++ +G+S IV
Sbjct: 152 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLI---EGLSHEVIVSA 208
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 209 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 261
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 262 CGAEFSMIMDCKGNLYSFGCPEYGQLG 288
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 143/313 (45%), Gaps = 45/313 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 1847 KVYACGEATNGRLG------------LGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHA 1894
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ +I D CG H+
Sbjct: 1895 TALTADGKVFSWGEGDDGKLG--------HFSRXNCDKPRLIEALKSRRIRDIACGSSHS 1946
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+V+++ S LA++D
Sbjct: 1947 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLV-GHRVVQVACGSRDAQTLALTD 2005
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 2006 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2064
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 2065 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDAGQVYA 2115
Query: 312 WGKNQYGQLGLGT 324
WG N +GQ G GT
Sbjct: 2116 WGDNDHGQQGNGT 2128
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++
Sbjct: 1935 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVL-- 1983
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 1984 VGHRVVQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNVPQNIERL 2037
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2038 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 2096
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 2097 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2154
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G V+ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 2791 YGWGHNHRGQLGG--VEGAKVKVPTPCEALAALRPAQLI----GGEQTLFAVTADGKLYA 2844
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 2845 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 2903
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHS 2962
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T ++ WG YG+LG
Sbjct: 2963 DSEDQ-LKPKLV-EALQGHRVVDVACG-----SGDAQTLCLTEDDTVWSWGDGDYGKLGR 3015
Query: 323 GTVEDQPFPLKV 334
G + P+KV
Sbjct: 3016 GGSDGCKVPMKV 3027
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 1832 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKVAVHSG 1890
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S PR++ K RI D+A G S L
Sbjct: 1891 GRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS-RRIRDIACGSSHSAAL 1949
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLVGHRVVQVACGSRDAQTL------ 2001
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2002 -ALTDEGLVFSWGDGDFGKLGRGGSE 2026
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 2875 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 2929
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 2930 VDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 2988
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L +++ V+ WG+ +YG++ P + G+ V V G
Sbjct: 2989 GDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLG-AVKVECGSQFSVA 3047
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 3048 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 3098
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 3099 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 3138
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG VY GWG + + LG + + TPC + R +L +
Sbjct: 2779 DWTLSAGGSGTVY--GWGHNHRGQLGGVEGAKVKVPTPCEALAAL---RPAQLIGGEQTL 2833
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 2834 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 2893
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 2894 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 2944
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 2945 AGGLYTWGKGRYGRLGHSDSEDQLKP 2970
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 95/172 (55%), Gaps = 11/172 (6%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +T+++ +++G+ +G+ GRG G + L G + CG
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKVDALTGLGAVKVECGS 3042
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS-AVDCVLAV 193
++ LT+SG VY+ G G + G G ++ P V+G ++G++++ +++ ++ CV
Sbjct: 3043 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCT 3101
Query: 194 SDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + GSA T+
Sbjct: 3102 ED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACGSAHTL 3150
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 2093 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 2147
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 2148 RVACGSSHSVAWT 2160
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 3734 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 3788
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 3789 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 3847
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 3848 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 3906
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 3907 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 3958
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 3959 NSEGQLGLG 3967
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 3658 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 3712
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 3713 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 3771
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 3772 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 3828
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 3829 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 3879
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 3880 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 3928
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 3882 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 3936
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P +V G ++G+ + ++S+
Sbjct: 3937 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTG-LQGKNVRQISA 3991
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS 240
+++G S
Sbjct: 721 QQISAGTS 728
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
Length = 521
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 159 AHSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAP-----KLIEGLSHEVIVSAACGRNHT 213
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 214 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 272
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 273 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 332
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DVA G + +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 333 DVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDFPGRGAAQIY 389
Query: 294 IAGPCTFGAITNFGHLYMWG 313
C+F A++ G L+ WG
Sbjct: 390 AGYTCSF-AVSEVGGLFFWG 408
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 102 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 161
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 162 LLITTEGTLWSWGRNEKGQLGHG-DTKRVEAPKLIEGL---SHEV-----IVSAACGRNH 212
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 213 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 253
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ P+++ +G+S IV
Sbjct: 150 RTVVSGSCAAHSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLI---EGLSHEVIVSA 206
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 207 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 259
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 260 CGAEFSMIMDCKGNLYSFGCPEYGQLG 286
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 3079 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3126
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3127 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3178
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3179 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3237
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3238 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3296
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3297 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3347
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3377
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 616 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 670
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 671 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 729
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 730 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 788
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 789 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 826
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3167 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3216
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3217 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3269
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3270 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3328
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3329 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3386
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 3064 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3122
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3123 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3181
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3182 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3233
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3234 -ALTDEGLVFSWGDGDFGKLGRGGSE 3258
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4161
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4162 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4220
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4221 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4279
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4280 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4330
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4331 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4370
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4159 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4209
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4210 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4261
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4262 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4320
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4321 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4377
Query: 240 SACTM 244
SA T+
Sbjct: 4378 SAHTL 4382
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 4023 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4076
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4077 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4135
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4136 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4194
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4195 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4247
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4248 GGSDGCKVPMKI 4259
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 634
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 635 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 690
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 691 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 739
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 740 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 769
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 4011 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4065
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4066 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4125
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4126 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4176
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4177 AGDLYTWGKGRYGRLGHSDSEDQLKP 4202
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 514 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 559
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 619
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 620 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 672
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 673 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 709
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 564 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 618
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 619 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 667
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4273 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4327
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4328 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4385
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3325 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3379
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3380 RVACGSSHSVAWT 3392
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 132/323 (40%), Gaps = 32/323 (9%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
AT S + + G N+ QLG + P V + LP P T + +A G
Sbjct: 49 ATPSGVASDTILAWGANNVGQLGDGSTIARNAP-------VAVSLP---PDTTVTAVAGG 98
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
+H++ +T +G N+FGQ G G + +A ++ H
Sbjct: 99 DSHSLALTSAGAVLAWGENNFGQLGTG-----NNLNSSVPITVALPPDTTVVAIAASHGH 153
Query: 137 TLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
+L LT +G V + WGA+ GQ G G+ N TP V G + +++ + LA++
Sbjct: 154 SLALTSAGAVLA--WGANNVGQLGNGNTFNSNTPVTVNLP-PGTTVATIAAGTNHSLAIT 210
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G WG + GQ+ + S + + I +A+G S + G +W
Sbjct: 211 STGAALAWGGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAW 270
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G +LIP + P + + S+ AG A+T+ G
Sbjct: 271 GGNSNGQLGTGNNAD-----SLIPIAV----ALPPGTTITSIAAGFTHSLAVTSTGTALA 321
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV 334
WG N GQLG+GT + P+ V
Sbjct: 322 WGGNSRGQLGIGTTTNSDTPVIV 344
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 20/251 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKVYS 148
+G N+ GQ G G + L + + AV G D H+L LT +G V +
Sbjct: 60 LAWGANNVGQLGDGSTIARNAPVA------VSLPPDTTVTAVAGGDSHSLALTSAGAVLA 113
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G GQ G G+ N P V + +V ++++ LA++ G V WG + G
Sbjct: 114 WGENNFGQLGTGNNLNSSVPITVALPPD-TTVVAIAASHGHSLALTSAGAVLAWGANNVG 172
Query: 209 QISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
Q+ + +TP ++ G + + +A+G + + G +WG GQ S
Sbjct: 173 QLGNGNTFNSNTPVTVNLPPGTT-VATIAAGTNHSLAITSTGAALAWGGNGNGQLGNNST 231
Query: 268 --SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
S++P + P + + ++ AG AIT+ G WG N GQLG G
Sbjct: 232 ATSLEPIAV--------TLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTGNN 283
Query: 326 EDQPFPLKVAV 336
D P+ VA+
Sbjct: 284 ADSLIPIAVAL 294
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 9/183 (4%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+ + LP PST I +A G ++++ IT A +G NS GQ G G +
Sbjct: 238 IAVTLP---PSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTG-----NNADSLIP 289
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+A G I G H+L +T +G + G + GQ G+G N +TP +V +
Sbjct: 290 IAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVNLPPD 349
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
I L G WGN+ GQ+ S + ++I +A
Sbjct: 350 -TTITTNDGGFFHSLGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIA 408
Query: 237 SGG 239
+GG
Sbjct: 409 AGG 411
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 1673 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 1727
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 1728 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 1786
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 1787 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 1845
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 1846 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 1897
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 1898 NSEGQLGLG 1906
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 1597 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 1651
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 1652 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 1710
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 1711 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 1767
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 1768 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 1818
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 1819 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 1867
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 1821 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 1875
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 1876 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 1930
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 29/221 (13%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
E+IM + L VY G G GQ N P + ++++
Sbjct: 1558 EQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVI--- 1613
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISE---SEMQISTPRVLSQCKG--VSRIVDVASGG 239
+C + G V G YG++ + ++ + T V+S +G V+++V
Sbjct: 1614 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSD 1671
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L + G V+SWG YG LG G R +P I L G E ++
Sbjct: 1672 GHSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQI-EALQG----------EEVVQM 1719
Query: 297 PCTF---GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C F +T+ G L+ +G YG+LGLG ++ P +V
Sbjct: 1720 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 1760
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 2952 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYMVKKVAVHSGGRHA 2999
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3000 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3051
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3052 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3110
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3111 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3169
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3170 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3220
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3250
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3040 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3089
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3090 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNVPQNIERL 3142
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3143 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3201
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3202 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3259
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G + + P ++ + G +V +++
Sbjct: 3987 GGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES-LRGVEVVDVAAGGAHSAC 4045
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VD+A G G A T+ L D+
Sbjct: 4046 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDIACGSGDAQTLCLTDD 4103
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4104 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4154
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4155 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4183
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3979 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRP-----RVIESLRGVEV 4033
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4034 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4092
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4093 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4151
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4152 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4202
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4203 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4242
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2937 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYMVKKVAVHSG 2995
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 2996 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3054
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3055 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3106
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3107 -ALTDEGLVFSWGDGDFGKLGRGGSE 3131
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4031 VEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4081
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4082 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4133
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4134 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4192
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4193 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4249
Query: 240 SACTM 244
SA T+
Sbjct: 4250 SAHTL 4254
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQC--GRGIVQEEDYQGKWFCHNIAD 121
K + H+A G ++ IT +T+G ++ + GR + E I+
Sbjct: 478 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNE-------ILIMISG 530
Query: 122 LEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L+ +K + CG TL E+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 531 LDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLD 589
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG 238
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G
Sbjct: 590 VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAG 648
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
+ C L ++ V+SWG Q R KP P+ L G
Sbjct: 649 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 688
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3883 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3937
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +S+P +L + V + V V SGG C L+ E
Sbjct: 3938 FAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3997
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 3998 GEVYSWGEAEDGKLGHGSR-SPCDRPRVIES-LRG-------VEVVDVAAGGAHSACVTA 4048
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4049 AGDLYTWGKGRYGRLGHSDSEDQLKP 4074
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 437 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 496
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR---IVDVASGGSACTM-LNDE 248
++ +G+++ WG Y ++ ++ +L G+ R I A T+ +
Sbjct: 497 ITAEGELYTWGRGNYXRLDHGRSAMN--EILIMISGLDRQKFIYKSCGIRFAQTLAFYEN 554
Query: 249 GLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 555 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI------------ 601
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 602 ---ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 631
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4145 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4199
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4200 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4257
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3198 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3252
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3253 RVACGSSHSVAWT 3265
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 3018 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3065
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3066 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3117
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3118 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3176
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3177 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3235
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3236 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3286
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3316
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 553 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 607
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 608 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 666
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 667 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 725
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 726 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 763
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3106 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3155
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3156 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3208
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3209 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3267
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3268 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3325
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 3003 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3061
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3062 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3120
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3121 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3172
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3173 -ALTDEGLVFSWGDGDFGKLGRGGSE 3197
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4046 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4100
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4101 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4159
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4160 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4218
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4219 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4269
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4270 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4309
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4098 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4148
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4149 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4200
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4201 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4259
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4260 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4316
Query: 240 SACTM 244
SA T+
Sbjct: 4317 SAHTL 4321
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3962 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4015
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4016 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4074
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4075 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4133
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4134 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4186
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4187 GGSDGCKVPMKI 4198
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 571
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 572 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 627
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 628 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 676
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 677 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 706
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3950 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4004
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4005 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4064
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4065 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4115
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4116 AGDLYTWGKGRYGRLGHSDSEDQLKP 4141
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 451 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 496
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 556
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 557 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 609
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 610 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 646
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 501 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 555
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 556 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 604
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4212 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4266
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4267 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4324
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3264 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3318
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3319 RVACGSSHSVAWT 3331
>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
Length = 439
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 68 TQIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
Q++ + +G AH+++IT +++G N GQ G G + + I L E
Sbjct: 64 VQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----KLIEVLSKE 118
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I+ A CG++HTL LTE+G V++ G GQ GLG+ P + G+ I K++
Sbjct: 119 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN-QTDAIPSPAQIMYNGQPITKMAC 177
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------- 233
+ + + KG+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 178 GAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKD 237
Query: 234 ------------DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
DVA G + +L+ + V+SWG+G G G K ++P L
Sbjct: 238 GQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKL 294
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 295 FDFPGRGAAQIYAGYTCSF-AVSEVGGLFFWG 325
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 122/294 (41%), Gaps = 48/294 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ACG T+ T++ +F G N QLG GN + + S P +
Sbjct: 120 IVSAACGRNHTLALTETGS----VFAFGENKMGQLGL------GNQTDAIPS----PAQI 165
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFC 116
+ I +A G ++++ ++FG +GQ G Q +Y +
Sbjct: 166 MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVP 225
Query: 117 HNIAD-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
+A +E K + D CG +HTL L +V+S G+G G+ G +
Sbjct: 226 RRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 285
Query: 165 QETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ P LV+ + G ++ + C AVS+ G +F WG + + ES M P+ +
Sbjct: 286 EMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR--ESTMY---PKAV 340
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQG---PKVSRSMK 270
G +I +A G S+ + DE + SWG +G LG G PK S + +
Sbjct: 341 QDLCGW-KIRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQ 392
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG +E GQ+ + + L + IV A G + L + G
Sbjct: 79 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGS 138
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF-GHL 309
V+++G +GQ + + IPS + P +K +A F I + G+L
Sbjct: 139 VFAFGENKMGQ---LGLGNQTDAIPSPAQIMYNGQPITK----MACGAEFSMIMDCKGNL 191
Query: 310 YMWGKNQYGQLG 321
Y +G +YGQLG
Sbjct: 192 YSFGCPEYGQLG 203
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 226 CKGVSRIVDVASGGSAC--TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFG 280
C ++ V SG A ++ EG ++SWG G LG G R P LI
Sbjct: 60 CLSGVQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPKLI------ 112
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
+ K + S G A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 113 --EVLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQ 170
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 278 LFGQHQFNPKS--KVESLIAGPCTFGA--ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
L+G H++ S +V ++++GPC + IT G L+ WG+N+ GQLG G + P
Sbjct: 52 LWGPHRYGCLSGVQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKL 111
Query: 334 VAV 336
+ V
Sbjct: 112 IEV 114
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
K++ CG ++ +LG L +S IP+P + + +K +A +G H
Sbjct: 1821 KVYACGEATNGRLG------------LGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHA 1868
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ +T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 1869 MALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 1920
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++YS G G G+ G G Q P LV+ + G R+V+++ S LA++D
Sbjct: 1921 AAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK-VLLGHRVVQVACGSRDAQTLALTD 1979
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 1980 EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2038
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T G ++
Sbjct: 2039 GKGDYFRLGHGTDV-HVRKPQMV-EGLRGK-------KIVHVAVGALHCLAVTETGQVFA 2089
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2119
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 1909 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NTTQLRPKLVKVLL- 1958
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 1959 -GHRVVQVA-CGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 2011
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2012 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVH 2070
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV++ G VF WG++++GQ ++ L Q +I VA G S
Sbjct: 2071 VAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2128
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 1806 VAGGSKSLFAVTAEGKVYACGEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSG 1864
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 1865 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 1923
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTF 300
G +YSWG YG LG G ++ ++P L+ L G +V + G
Sbjct: 1924 TSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLV-KVLLGH-------RVVQVACGSRDAQT 1974
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 1975 LALTDEGMVFSWGDGDFGKLGRGGSE 2000
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D I L
Sbjct: 2845 IQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRP-----RVIESL 2899
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +++D G H+ +T SG++Y+ G G G+ G G +Q P LV ++G R++
Sbjct: 2900 RGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEA-LQGHRVID 2958
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 2959 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGS 3017
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 3018 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATG 3068
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 3069 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 3113
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD 188
+ G + TLF +T GK+Y+ G+GA G+ G+G + TP L+ + R V ++S
Sbjct: 2801 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGK 2860
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LA+S +G+++ WG +E G++ + PRV+ +GV +VD+A+GG+ +
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGV-EVVDIAAGGAHSACITA 2919
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
G +Y+WG YG LG G + +KP L+ L G + +G +T
Sbjct: 2920 SGELYTWGKGRYGRLGHGDSEDQ-LKPKLV-EALQGHRVIDVACG-----SGDAQTLCLT 2972
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ ++ WG YG+LG G + P+K+
Sbjct: 2973 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKI 3002
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R V+L + AV
Sbjct: 2754 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV 2811
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLV 251
+ G ++ G G++ + +STP +L + V R V V SGG C L+ EG +
Sbjct: 2812 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 2871
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P +I S L G +V + AG IT G
Sbjct: 2872 YSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------VEVVDIAAGGAHSACITASGE 2922
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
LY WGK +YG+LG G EDQ P
Sbjct: 2923 LYTWGKGRYGRLGHGDSEDQLKP 2945
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +TD++ +++G+ +G+ GRG G I L G ++ CG
Sbjct: 2963 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-----GSDGCKVPMKIDSLTGLGVVKVECGS 3017
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS-AVDCVLAV 193
++ LT+SG VY+ G G + G G ++ P V+G ++G++++ +++ ++ CV
Sbjct: 3018 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCT 3076
Query: 194 SDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
D G+V+ WG+++ GQ+ + + I PR+++ +G + ++ + GSA T+
Sbjct: 3077 ED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKINRVACGSAHTL 3125
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 3016 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 3070
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G++I +++ LA S
Sbjct: 3071 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKINRVACGSAHTLAWS 3128
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +T+ F +G+N GQ G G + LEG+KI
Sbjct: 2067 KIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 2121
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 2122 RVACGSSHSVAWT 2134
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 2956 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3003
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3004 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3055
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3056 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3114
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3115 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3173
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3174 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 3224
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3254
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 493 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 547
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 548 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 606
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 607 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 665
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 666 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 703
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3044 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3093
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3094 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3146
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3147 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3205
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3206 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3263
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2941 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 2999
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3058
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3110
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3111 -ALTDEGLVFSWGDGDFGKLGRGGSE 3135
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3984 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4038
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4039 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4097
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4098 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4156
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4157 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4207
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4208 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4247
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4036 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4086
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4087 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4138
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4139 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4197
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4198 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4254
Query: 240 SACTM 244
SA T+
Sbjct: 4255 SAHTL 4259
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3900 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 3953
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 3954 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4012
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4071
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4072 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4124
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4125 GGSDGCKVPMKI 4136
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 567
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 568 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 616
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 617 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 646
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3888 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3942
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3943 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4002
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4003 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4053
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4054 AGDLYTWGKGRYGRLGHSDSEDQLKP 4079
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 391 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 436
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 496
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 549
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 550 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 586
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 441 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 495
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 544
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4150 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4204
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4205 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4262
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3202 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3256
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3257 RVACGSSHSVAWT 3269
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+NS GQ G V + C A L + ++ A CG+ H+L L G V+SC
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVR-CRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G + GQ G P ++ +E + IV +S + LA+ +G VF WG+ GQ
Sbjct: 62 GNNSCGQLGRKRCQKHGRPAQIQA-LETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQ 120
Query: 210 --ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
I E + S P+ + + +I+ V+ G L +G V+SWG +G LG G
Sbjct: 121 LGIREFKKLSSIPKKIDELSSF-KIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGEN 179
Query: 265 VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
V P + S L G P ++V AG A++ G Y WG+N GQL L
Sbjct: 180 VPSQASPQWVKS-LDGI----PLAQVA---AGGAHSFALSFSGTSYGWGRNNAGQLALS 230
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A G H++++ + ++ GNNS GQ GR Q+ + I LE + I+ CG
Sbjct: 43 ACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQ-----IQALETQDIVSVSCG 97
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
++H+L + + G+V+S G G+DGQ G+ + E+ +I+++S +A+
Sbjct: 98 KEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIAL 157
Query: 194 SDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+ G VF WG + +GQ + E+ ++P+ + G+ + VA+GG+ L+ G
Sbjct: 158 AQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIP-LAQVAAGGAHSFALSFSGTS 216
Query: 252 YSWG------YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
Y WG L G+ + KP I G+ + + +V + G +T
Sbjct: 217 YGWGRNNAGQLALSGKKESAEQISKPFSI-----GELK---RLQVTYISCGDEHTAVLTQ 268
Query: 306 FGHLYMWGKNQYGQLG 321
G ++ +G N GQLG
Sbjct: 269 DGKVFTFGSNDSGQLG 284
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 31/291 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
++ CG NS QLG +K G P + ++ TQ I ++ G+ H++ I
Sbjct: 58 VWSCGNNSCGQLGRKRCQKHGRPAQ-----------IQALETQDIVSVSCGKEHSLAICK 106
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ S GQ G ++ K I +L KI+ CG H++ L + G+
Sbjct: 107 EGRVFSWGSGSDGQLGIREFKKLSSIPK----KIDELSSFKIIQVSCGHYHSIALAQDGR 162
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G GQ GLG ++ +Q +P V+ ++G + ++++ A+S G +GWG
Sbjct: 163 VFSWGKNNHGQLGLGENVPSQASPQWVKS-LDGIPLAQVAAGGAHSFALSFSGTSYGWGR 221
Query: 205 SEYGQIS-----ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
+ GQ++ ES QIS P + + K + ++ ++ G +L +G V+++G
Sbjct: 222 NNAGQLALSGKKESAEQISKPFSIGELKRL-QVTYISCGDEHTAVLTQDGKVFTFGSNDS 280
Query: 260 GQ-GPKVSRSMK-PTLIPSTL-FGQHQFNPKSKVESLIAGPCTFGAITNFG 307
GQ G ++ MK P ++ S + F Q +A CT G + +FG
Sbjct: 281 GQLGRQLISGMKGPQVVDSAVSFSQIACGSYHT----LAYSCTTGQVISFG 327
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
KI ++CG+ ++ + ++F G N+ QLG + + V S IPL
Sbjct: 142 FKIIQVSCGHYHSIALAQDG----RVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPL 197
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ-GKWFCHNIA 120
+A G AH+ ++ + ++ +G N+ GQ +E Q K F +I
Sbjct: 198 A---------QVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPF--SIG 246
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+L+ ++ CG +HT LT+ GKV++ G GQ G ++ + P +V + +I
Sbjct: 247 ELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVSFSQI 306
Query: 181 V 181
Sbjct: 307 A 307
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 22/93 (23%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
Q+ +++ G HT V+T + FTFG+N GQ GR + I+ ++G +++
Sbjct: 252 QVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQL--------------ISGMKGPQVV 297
Query: 129 DA-------VCGQDHTL-FLTESGKVYSCGWGA 153
D+ CG HTL + +G+V S G G+
Sbjct: 298 DSAVSFSQIACGSYHTLAYSCTTGQVISFGCGS 330
>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
Length = 427
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 65 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 120 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKVACGAEFSMIMDCKG 178
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 291
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 292 SQIYAGYTCSF-AVSEVGGLFFWG 314
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 90 FTFGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLT 141
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 12 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLIT 71
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GK++S G GQ G G E P L+ G + E IV + + LA+++ G VF
Sbjct: 72 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEG-LSHEVIVSAACGRNHTLALTETGSVFA 130
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+G ++ GQ+ + P I VA G +++ +G +YS+G YG
Sbjct: 131 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 259 LGQ---GPKVSRSMK------------PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
LG G ++R+ + I T GQ P V + G +
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ ++ WG YG+LG +D+ P V +
Sbjct: 251 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 283
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 8 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 67
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 68 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 118
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 119 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 159
>gi|47214873|emb|CAG00921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKL 183
++D CG H LFLTE G V SCG +DGQ G + + P G +EG +V++
Sbjct: 27 RTVIDISCGDRHILFLTEDGCVLSCGNNSDGQLGRKKKHKNKAP----GCVEGLGHVVQI 82
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-----TPRVLSQCKGVSRIVDVASG 238
S + LAV G VF WG +E GQ+ + +S P + +V VA G
Sbjct: 83 SCGCNHSLAVDASGHVFSWGAAEDGQLGLNPNPLSGRPRRVPTGMVTIPLRVPVVQVACG 142
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
S L G V SWG YG LG G +V P L+ + L G V + A
Sbjct: 143 KSHSVALTTGGDVLSWGSNSYGQLGLGTEVPSQETPALV-AGLVG-------VPVSQISA 194
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
G +T G +Y G NQ GQLGL V+++
Sbjct: 195 GATHTMFLTLAGLVYCCGANQSGQLGLNRVDEK 227
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ I+CG ++ D + +F G D QLG + G P + V IPL V
Sbjct: 79 VVQISCGCNHSLAV----DASGHVFSWGAAEDGQLGLNPNPLSGRPRRVPTGMVTIPLRV 134
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI-VQEEDYQGKWFCHNIADL 122
P Q+ A G++H++ +T ++G+NS+GQ G G V ++ +A L
Sbjct: 135 --PVVQV---ACGKSHSVALTTGGDVLSWGSNSYGQLGLGTEVPSQETPAL-----VAGL 184
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ 165
G + G HT+FLT +G VY CG GQ GL ++ +
Sbjct: 185 VGVPVSQISAGATHTMFLTLAGLVYCCGANQSGQLGLNRVDEK 227
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 20/245 (8%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
FGN + G+ G G +++ + +I LEG ++ G HTL LT G+V SCG
Sbjct: 21 FGNTNSGELGLGGIEDHIVR---VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGS 77
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
Q G + P ++ RIV++ +A+++ G V+ WG++ GQ+
Sbjct: 78 NDHDQLGQEVSTTKPEPVTA---LQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLG 134
Query: 212 ESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVS 266
E Q S +PR + + +V +A G + C L + G +Y+W G G LG G V
Sbjct: 135 NGEGQESRLSPRFVKTLAPFT-VVQIACGSNHCLALLNNGALYAWGDNGNGQLGIG-TVG 192
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ + + L G P S++ G ++ G +++WG N++GQLGL +
Sbjct: 193 EPQRVPVEVTNLLGL----PLSQIA---CGANHSMVLSKSGVIFVWGSNRFGQLGLSDNK 245
Query: 327 DQPFP 331
D+ FP
Sbjct: 246 DRAFP 250
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 40/334 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ IA G T+V T ++ CG N QLG K P+ +
Sbjct: 51 IRVRQIATGAHHTLVLTSHG----RVLSCGSNDHDQLGQEVSTTKPEPVTALQCL----- 101
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+I + G+ H++ +T+ + +G+NS GQ G G QE ++ +
Sbjct: 102 -------RIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRF----VKT 150
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGEIEGERI 180
L ++ CG +H L L +G +Y+ G +GQ G+G + Q P V + G +
Sbjct: 151 LAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLL-GLPL 209
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+++ + + +S G +F WG++ +GQ+ S+ + L + + +A+GG+
Sbjct: 210 SQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGA 269
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L G V+++G+ + +V S++ T + NP+S + + F
Sbjct: 270 HSAALTAHGGVFTFGWSFY-ESHEVRISLRGT----------ESNPQSALARKL-----F 313
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
I + +G YGQLG G+ DQ P+K+
Sbjct: 314 SLIEREFCRHSYGS--YGQLGHGSKNDQLTPMKI 345
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 42/328 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L V IP + S+ + K +A +G H
Sbjct: 3015 KVYACGEATNGRLG----------LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 3064
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C I L ++I D CG H+
Sbjct: 3065 LTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALRAKRIRDIACGSSHSAA 3116
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D+G
Sbjct: 3117 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEG 3175
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
VF WG+ ++G++ + + P+ + + G + + G L G+V++WG
Sbjct: 3176 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGK 3234
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G V KP ++ L G+ K+ + G A+T+ G +Y WG
Sbjct: 3235 GDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYAWG 3285
Query: 314 KNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
N +GQ G GT P V + GQK
Sbjct: 3286 DNDHGQQGNGTTTVNRKPTLVQGLEGQK 3313
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ H+A G ++ IT +T+G ++G+ G G ++E +A L+G K++
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLKGLKVI 607
Query: 129 DAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +VK+
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLEVVKVRCG 666
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG + ++ +E + PR+L G +++DVA+G + C L
Sbjct: 667 SQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHG-KKVIDVAAGSTHCLAL 725
Query: 246 NDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
++ V+SWG Q R KP P+ L G
Sbjct: 726 TEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 758
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3103 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3152
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3153 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3205
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3206 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3264
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3265 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3322
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G + + P +V + G +V +++
Sbjct: 4051 GGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES-LRGIEVVDVAAGGAHSAC 4109
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4110 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEVLQG-HRVVDVACGSGDAQTLCLTDD 4167
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI--------AGP 297
V+SWG YG LG+G G K+ESL G
Sbjct: 4168 DTVWSWGDGDYGKLGRG-----------------GSDGCKVPMKIESLTGLGVVKVECGS 4210
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G +Y WGK Y +LG G+ + P +V
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4247
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 3000 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSG 3058
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ + RI D+A G S L
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRA-KRIRDIACGSSHSAAL 3117
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3118 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3169
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3170 -ALTDEGLVFSWGDGDFGKLGRGGSE 3194
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + + +G H + ++ +++G G+ G G D + L
Sbjct: 4038 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRP-----RVVESL 4092
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +++D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V
Sbjct: 4093 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE-VLQGHRVVD 4151
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4152 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLG-VVKVECGS 4210
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATG 4261
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4262 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4306
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 123/247 (49%), Gaps = 27/247 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRI 59
I++ D+A G + T + D L+ G +LG+ D + P +E++ +
Sbjct: 4095 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4151 DVAC----------GSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKI 4195
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++
Sbjct: 4196 ESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKK 4254
Query: 180 IVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
++ +++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ +
Sbjct: 4255 VIAIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVA 4311
Query: 238 GGSACTM 244
GSA T+
Sbjct: 4312 CGSAHTL 4318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3947 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4001
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +S P +L + V R V V SGG C L+ E
Sbjct: 4002 FAVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE 4061
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P ++ S L G +V + AG +T
Sbjct: 4062 GEVYSWGEAEDGKLGHGSR-SPCDRPRVVES-LRG-------IEVVDVAAGGAHSACVTA 4112
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G LY WGK +YG+LG EDQ P V V
Sbjct: 4113 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEV 4143
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+V+S G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGS-QFSV---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+VF WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G V+SWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQG 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4263
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4264 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4321
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3261 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3315
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3316 RVACGSSHSVAWT 3328
>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
Length = 483
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 68 TQIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
Q++ + +G AH+++IT +++G N GQ G G + + I L E
Sbjct: 108 VQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----KLIEVLSKE 162
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
I+ A CG++HTL LTE+G V++ G GQ GLG+ P + G+ I K++
Sbjct: 163 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN-QTDAIPSPAQIMYNGQPITKMAC 221
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------- 233
+ + + KG+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 222 GAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKD 281
Query: 234 ------------DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
DVA G + +L+ + V+SWG+G G G K ++P L
Sbjct: 282 GQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKL 338
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 339 FDFPGRGAAQIYAGYTCSF-AVSEVGGLFFWG 369
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 122/294 (41%), Gaps = 48/294 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ACG T+ T++ +F G N QLG GN + + S P +
Sbjct: 164 IVSAACGRNHTLALTETGS----VFAFGENKMGQLGL------GNQTDAIPS----PAQI 209
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFC 116
+ I +A G ++++ ++FG +GQ G Q +Y +
Sbjct: 210 MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVP 269
Query: 117 HNIAD-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
+A +E K + D CG +HTL L +V+S G+G G+ G +
Sbjct: 270 RRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 329
Query: 165 QETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL 223
+ P LV+ + G ++ + C AVS+ G +F WG + + ES M P+ +
Sbjct: 330 EMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR--ESTM---YPKAV 384
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQG---PKVSRSMK 270
G +I +A G S+ + DE + SWG +G LG G PK S + +
Sbjct: 385 QDLCGW-KIRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQ 436
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG +E GQ+ + + L + IV A G + L + G
Sbjct: 123 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGS 182
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF-GHL 309
V+++G +GQ + + IPS + P +K +A F I + G+L
Sbjct: 183 VFAFGENKMGQ---LGLGNQTDAIPSPAQIMYNGQPITK----MACGAEFSMIMDCKGNL 235
Query: 310 YMWGKNQYGQLG 321
Y +G +YGQLG
Sbjct: 236 YSFGCPEYGQLG 247
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C ++ V SG A
Sbjct: 63 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHS 122
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI + K + S G
Sbjct: 123 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPKLI--------EVLSKEVIVSAACGRNH 173
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 174 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQ 214
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4350
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4350
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|340370015|ref|XP_003383542.1| PREDICTED: regulator of chromosome condensation-like [Amphimedon
queenslandica]
Length = 440
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 137/324 (42%), Gaps = 51/324 (15%)
Query: 44 RKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
RKK P+ V+ +I + G HT+ + D FT+G N G GR
Sbjct: 60 RKKATPVGGVLK-----------GKKILQVVCGGIHTVALLDGGEVFTWGCNDEGALGRS 108
Query: 104 IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG----ADGQTGL 159
+ ++Y + L+G I G HT LT++G VY WG ADG GL
Sbjct: 109 VSTTDEYT----PGVVKKLKGFNITQVSAGDCHTAALTDNGHVYC--WGVFRDADGPLGL 162
Query: 160 GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST 219
+ + P LV + +K++S + ++ +++ GD++ +G + GQ+ ST
Sbjct: 163 VNSKPEFEPELVYSSAF-NKAIKVTSGSNHIVILTEHGDIYSFGCGDSGQLGRVPECFST 221
Query: 220 ------------PRVLSQCKGVSRIVDVASG-----------GSACTML--NDEGLVYSW 254
P+++ K R+ A G C+ +++ +Y W
Sbjct: 222 RGGRRGIGYLLAPQIVRFPKKGRRLTGKAGATKSFKISDVYAGEHCSFAIGSEDRQIYVW 281
Query: 255 GY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G G LG G + SR + P +P + K + LIAG + + N GHLY
Sbjct: 282 GLNHRGQLGLGDQESRFV-PEKVPEDWLWDWAKSSKQDKQLLIAGGGSHSLVCNDGHLYS 340
Query: 312 WGKNQYGQLGLGTVEDQPFPLKVA 335
G N+YGQLGL +E P K++
Sbjct: 341 MGANEYGQLGLKQIEMTSKPTKLS 364
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 148/388 (38%), Gaps = 82/388 (21%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI + CG TV + +F G N + LG R E V+
Sbjct: 74 KILQVVCGGIHTVALLDGGE----VFTWGCNDEGALG----RSVSTTDEYTPGVVK---- 121
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K I ++ G HT +TDN + +G G+V + ++ A
Sbjct: 122 -KLKGFNITQVSAGDCHTAALTDNGHVYCWGVFRDADGPLGLVNSKPEFEPELVYSSA-- 178
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQ--------------TGLGHLNNQETP 168
K + G +H + LTE G +YS G G GQ G+G+L P
Sbjct: 179 -FNKAIKVTSGSNHIVILTEHGDIYSFGCGDSGQLGRVPECFSTRGGRRGIGYL---LAP 234
Query: 169 CLVRGEIEGERIVKLSSAVD------------CVLAV-SDKGDVFGWGNSEYGQIS--ES 213
+VR +G R+ + A C A+ S+ ++ WG + GQ+ +
Sbjct: 235 QIVRFPKKGRRLTGKAGATKSFKISDVYAGEHCSFAIGSEDRQIYVWGLNHRGQLGLGDQ 294
Query: 214 EMQISTPRV-------LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
E + +V ++ + + +A GGS + ND G +YS G YG LG
Sbjct: 295 ESRFVPEKVPEDWLWDWAKSSKQDKQLLIAGGGSHSLVCND-GHLYSMGANEYGQLGL-- 351
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ ++ T P+ L G + G C+F A+T G ++ WG QLG G
Sbjct: 352 ---KQIEMTSKPTKLSGISDV-----TDIACGGRCSF-AVTKDGKVFSWGIGSNYQLGCG 402
Query: 324 TVED---QPFP---------LKVAVGGQ 339
ED +P P LKV+ GGQ
Sbjct: 403 LDEDDVFEPTPMVGKHVENVLKVSSGGQ 430
>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
Length = 427
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + + L E I+ A CG++HT
Sbjct: 65 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLVEGLSHEVIVSAACGRNHT 119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 120 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 178
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 291
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 292 SQIYAGYTCSF-AVSEVGGLFFWG 314
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 90 FTFGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLT 141
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 12 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLIT 71
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GK++S G GQ G G E P LV G + E IV + + LA+++ G VF
Sbjct: 72 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEG-LSHEVIVSAACGRNHTLALTETGSVFA 130
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+G ++ GQ+ + P I +A G +++ +G +YS+G YG
Sbjct: 131 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 259 LGQ---GPKVSRSMK------------PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
LG G ++R+ + I T GQ P V + G +
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ ++ WG YG+LG +D+ P V +
Sbjct: 251 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 283
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 8 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 67
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P L+ H+ + S G
Sbjct: 68 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLVEGL---SHEV-----IVSAACGRNH 118
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 119 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 159
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 30/244 (12%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT---GRAHTIVITD 85
CG NS QLG +KG P R P + P+ + H+A G+ H++ +
Sbjct: 18 SCGDNSRGQLG-----RKGTP--------RGEQPERIPALETLHVALVSCGKEHSLAVCH 64
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G S GQ G G ++E + K I L KI+ CG H+L L+E G+
Sbjct: 65 KGRVFAWGAASEGQLGIGELKETTFIPK----KIKTLADIKIIQVACGHYHSLALSEDGQ 120
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FGWG+
Sbjct: 121 VFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGTSFGWGS 179
Query: 205 SEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
+ GQ++ S +Q P ++ K +S +V ++ G +L +G V+++G YG
Sbjct: 180 NNAGQLALSGNNAPVQRYKPVLVGALKTLS-VVFISCGYEHTAVLTQDGKVFTFGDNSYG 238
Query: 258 LLGQ 261
LG
Sbjct: 239 QLGH 242
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 37/272 (13%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
+G H++++ + + G+NS GQ GR G + E + I LE + CG
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE------RIPALETLHVALVSCG 55
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAVDCVL 191
++H+L + G+V++ G ++GQ G+G L +ET + + + +I++++ L
Sbjct: 56 KEHSLAVCHKGRVFAWGAASEGQLGIGEL--KETTFIPKKIKTLADIKIIQVACGHYHSL 113
Query: 192 AVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
A+S+ G VF WG + +GQ+ E Q S RV S +G+ + VA+GG+ L+
Sbjct: 114 ALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFALSLS 171
Query: 249 GLVYSWG------YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF-- 300
G + WG L G V R KP L+ + K S++ C +
Sbjct: 172 GTSFGWGSNNAGQLALSGNNAPVQR-YKPVLVGAL-----------KTLSVVFISCGYEH 219
Query: 301 -GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T G ++ +G N YGQLG + ++ P
Sbjct: 220 TAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGP 251
>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
cuniculus]
Length = 560
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 198 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 252
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + KG
Sbjct: 253 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMITDCKG 311
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 312 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 371
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 372 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 424
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 425 SQIYAGYTCSF-AVSEVGGLFFWG 447
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 189 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 245
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 246 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 298
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F IT+ G+LY +G +YGQLG
Sbjct: 299 CGAEFSMITDCKGNLYSFGCPEYGQLG 325
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 141 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 200
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 201 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 251
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 252 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 292
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 147/371 (39%), Gaps = 63/371 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
++ IACG +A D + +GC N QLG D + +P + IP+ V
Sbjct: 140 VSMIACGDSH-ALAVLPNDATVLSWGC--NRWGQLGLGDQVNRCHPTPISGLSQSIPVFV 196
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
A G H+ V++ F+FG +FG+ G G + + I+ L
Sbjct: 197 ----------AAGSQHSFVLSKFGELFSFGCGTFGRLGHG-----NELPSFNPRPISTLV 241
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G+ I+ G H+ + G +Y+ GW GQ GLG + P + E+E IVK+
Sbjct: 242 GKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNK-ELERFNIVKV 300
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
+ L + G V+ +G + GQ I I R+ K I+D+A+G
Sbjct: 301 VCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYH 360
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------------- 285
+L +G VYS+GY G LG G V +P L+P + F H+FN
Sbjct: 361 VLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHF-NHEFNDSIDSYKEIYGEY 419
Query: 286 ---------------PKSKVE----------SLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
P VE + AG IT+ G LY +G +L
Sbjct: 420 NSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRL 479
Query: 321 GLGTVEDQPFP 331
G EDQ P
Sbjct: 480 GNNCQEDQDMP 490
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 31/265 (11%)
Query: 90 FTFGNNSFGQCG-------------RGIVQEEDYQGKWFCHNIADL--EGEKIMDAVCGQ 134
+++G N +GQC + V E+D + + L +G + CG
Sbjct: 88 YSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKLPTLIKQGLIVSMIACGD 147
Query: 135 DHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L L V S G GQ GLG N+ P + G + V +++ +
Sbjct: 148 SHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISG-LSQSIPVFVAAGSQHSFVL 206
Query: 194 SDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
S G++F +G +G++ +E+ PR +S G IV VA+G ++ +G +Y
Sbjct: 207 SKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVG-KHIVSVAAGLMHSAAVDSQGALY 265
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+WG YG LG G ++K +P+ +FN + ++ G + GH+
Sbjct: 266 TWGWNRYGQLGLG-----TVKKHTLPNKNKELERFN----IVKVVCGKNHTLVLDVNGHV 316
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
Y +G N GQLG+G+ D P ++
Sbjct: 317 YSFGFNVCGQLGIGSYTDSIKPNRI 341
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 38/216 (17%)
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE------RIVKLSSAVDCVLAVS--- 194
G++YS G+ GQ L + +N + ++ + I+KL + + L VS
Sbjct: 85 GQLYSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKLPTLIKQGLIVSMIA 144
Query: 195 -----------DKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDV--ASGGS 240
+ V WG + +GQ+ ++ P +S G+S+ + V A+G
Sbjct: 145 CGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPIS---GLSQSIPVFVAAGSQ 201
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+L+ G ++S+G +G LG G ++ S P I STL G+H + S+ AG
Sbjct: 202 HSFVLSKFGELFSFGCGTFGRLGHGNELP-SFNPRPI-STLVGKH-------IVSVAAGL 252
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
A+ + G LY WG N+YGQLGLGTV+ P K
Sbjct: 253 MHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNK 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 35/235 (14%)
Query: 61 LPVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
LP K+ + I + G+ HT+V+ N ++FG N GQ G G +
Sbjct: 285 LPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDS------IKP 338
Query: 118 NIADLE---GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRG 173
N DL+ ++I+D G H L LT+ G VYS G+ +DG GLG + +Q P L+
Sbjct: 339 NRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPF 398
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST----PRVLSQCKGV 229
+ + ++D +++G EY SE+++ + P+V+ +
Sbjct: 399 SHFNH---EFNDSIDSY------KEIYG----EYNSDSENDINNNNAKLPPKVVELHNEI 445
Query: 230 SRI-VDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFG 280
+ V +A+GG ++ G +Y++G G LG + + M P ++ ++G
Sbjct: 446 GDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDM-PCIVNKEIWG 499
>gi|218189153|gb|EEC71580.1| hypothetical protein OsI_03953 [Oryza sativa Indica Group]
Length = 403
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 75/335 (22%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G AH I +T + FT+G + GQ G G V+ + + E I
Sbjct: 54 VSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPHPKL-----VKFFENYMITC 108
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
G +H+ F T+SG+++ CG G+ GQ G G + + P V + +V+L+ +
Sbjct: 109 VSAGWNHSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLPFEV-AYFTTKHVVRLALGMRH 167
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLS---QCKGVSRIVDVASGGSACT 243
L + V+G+G++ GQI + ++ PR++ CK I ++ + G
Sbjct: 168 SLVLLKDNSVYGFGSTRRGQIGRCTRNQKFYDVPRIIDGFPDCK----IGNIYANGDHSA 223
Query: 244 MLNDEGLVYSWGYGLLGQ-----------------------------------GPKVSRS 268
L++ G +Y WG L+G+ G R
Sbjct: 224 ALDESGQLYIWGRALIGEHDDDQPRPVFPSLGISQVALGWHHALVLSGELYTIGAYRHRK 283
Query: 269 MKPTLIPSTLFGQHQFNPKSK---------VESLIAGPCTFG--------------AITN 305
+ P ++PS Q + NP + +L+ PC G ++T+
Sbjct: 284 LDPHVLPSAEPVQ-RLNPATTSHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTD 342
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
G ++ WG ++GQLGLG DQ P +V +G ++
Sbjct: 343 KGTVFTWGWGEHGQLGLGDTCDQVTPQRVNIGDKR 377
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 40/309 (12%)
Query: 51 ELVMS----FVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ 106
EL M+ F IP+ ++ +A G HT+ +TD + +++G + G+
Sbjct: 614 ELTMANINKFQMIPI---FKGIKVLQVACGDYHTLALTDTDQVYSWGGTLHKKVGQR--- 667
Query: 107 EEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD----GQTGLGHL 162
GK I L + ++ CG H+ +T++G +Y+ G G GQ GLGH+
Sbjct: 668 ----SGK--PAPIQQLNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHV 721
Query: 163 NNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV 222
+ E P ++ EG++IVK+S +A++ + ++FGWG E+G++ S+ + + RV
Sbjct: 722 KDIENPEKLKF-FEGKKIVKVSCGQFHTMALTSENELFGWGAGEFGELGTSKHEYTPIRV 780
Query: 223 ---LSQCKGV-------SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKP 271
+Q + + I ++ GG +L + G +YS GYG GQ G + S +
Sbjct: 781 KVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCE 840
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP-F 330
+ TL K K+ + AG A+++ ++ G GQLGLG E + F
Sbjct: 841 FQLVWTL-------TKKKIIKIAAGWNHSLALSDQNDIFACGHGARGQLGLGDEESRTIF 893
Query: 331 PLKVAVGGQ 339
V++GG+
Sbjct: 894 THVVSLGGK 902
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +G N G+ G ++ Y N +L+ I Q+H+ ++ +G++Y C
Sbjct: 546 FAWGKNESGELSFGNQKQPFYNKP---ENPKNLDRIYIKQISTSQNHSACISANGELYVC 602
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G G+ GL L I +G ++++++ LA++D V+ WG + +
Sbjct: 603 GSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSWGGTLHK 662
Query: 209 QISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-------YGLLGQ 261
++ + + + + L++ KGV + V G + G +Y+WG G LG
Sbjct: 663 KVGQRSGKPAPIQQLNK-KGV---IQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGL 718
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G +K P L +F K+ + G A+T+ L+ WG ++G+LG
Sbjct: 719 G-----HVKDIENPEKL----KFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEFGELG 769
Query: 322 LGTVEDQPFPLKV 334
E P +KV
Sbjct: 770 TSKHEYTPIRVKV 782
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 19/253 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---SQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 150 GWGADGQTG--LGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G Q G L + +P L+ E++ I+++ LA+SD G V WG+++
Sbjct: 65 GSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 124
Query: 208 GQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ---- 261
GQ+ + + + P+V+ Q +V +A G + L G +YSWG + GQ
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLV-TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 183
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
P L +TL G + ++ G I+ G ++ WG+N GQLG
Sbjct: 184 SPNDLTHCNYPLRLTTLLG-------IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 236
Query: 322 LGTVEDQPFPLKV 334
L ++ +P ++
Sbjct: 237 LNDETNRSYPTQL 249
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T + G+N + Q G + + + I +L+
Sbjct: 38 PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLL--IPELQDY 95
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I+ CG H+L L++ G+V S WG + LGH ++E P +VR ++ + +V+
Sbjct: 96 VIIQICCGSRHSLALSDWGQVLS--WGDNDCGQLGHATDKEIVQLPKVVR-QLVTKTVVQ 152
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD-------- 234
++ + LA++ G+++ WG++ YGQ+ +++P L+ C R+
Sbjct: 153 IACGNNHSLALTSCGELYSWGSNIYGQLG-----VNSPNDLTHCNYPLRLTTLLGIPLAA 207
Query: 235 VASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A GG+ +++ G V+ WG G LG + +RS L G V
Sbjct: 208 IACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG---------VR 258
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +TN G ++ G YGQLG G ++ P V
Sbjct: 259 FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 301
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 37/299 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN---PLELVMSFVRIP 60
+ IACG ++ T + L+ G N QLG + P + PL L + + IP
Sbjct: 150 VVQIACGNNHSLALTSCGE----LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIP 204
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L +A G H+ +I+ + F +G N+ GQ G D + + +
Sbjct: 205 LAA---------IACGGNHSFLISKSGAVFGWGRNNCGQLGLN-----DETNRSYPTQLK 250
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L + CG + ++FLT G V++CG GA GQ G G +N+ P +V E+ G I
Sbjct: 251 TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMGSTI 309
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASG 238
+++ LA V +G V+ +G GQ+ + S + P+V+ V+
Sbjct: 310 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPW-------VSPS 362
Query: 239 GSACTMLNDE--GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
GSA ND LV + G V+ ++ +P F +NPKS++ +L A
Sbjct: 363 GSALLQSNDSQVSLVIRQIFS-GGDQSIVTTTLFVDKVPPEDF--RNYNPKSQILTLTA 418
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 38/309 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRIPLPVKHPSTQIKHLA--TGRAHTI 81
KL+ CG ++ +LG D P + + FV IK +A +G H +
Sbjct: 3065 KLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFV------------IKKVAVHSGGKHAL 3112
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D I L+ ++I D CG H+ +
Sbjct: 3113 ALTQDGKVFSWGEGEDGKLGHGNCISLDKPKL-----IEVLKSKRIRDIACGSGHSAAIA 3167
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
+G++Y+ G G G+ G G Q P LV+ I G R+V+++ S +A++ G V
Sbjct: 3168 SNGELYTWGLGEYGRLGHGDTITQTRPKLVQALI-GHRVVQVACGSRDAQTMALTTDGYV 3226
Query: 200 FGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
+ WG+ ++G++ TP ++ + + ++ V G L G V++WG
Sbjct: 3227 YSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLG-VIQVECGAQFSLALTKYGEVWTWGKGD 3285
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Y LG G KPTL+ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3286 YFRLGHGND-HHVRKPTLVEG-LRGK-------KIIHVAVGALHCLAVTDTGQVYAWGDN 3336
Query: 316 QYGQLGLGT 324
+GQ G GT
Sbjct: 3337 DHGQQGNGT 3345
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 39/279 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T I A G+ H + +T + +++GN G+ G G D I L +
Sbjct: 567 PITMIASHADGK-HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKL-----IEALLEK 620
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS- 184
I+ CG ++ L+ +G++Y+ G G G+ G G+ ++ TP LV ++G +V ++
Sbjct: 621 NIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLV-TTLKGHTVVHVAC 679
Query: 185 -SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
S L V+ G VF WG+ +YG++ S TP+++ + ++ +V V G
Sbjct: 680 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN-VVKVFCGSQFS 738
Query: 243 TMLNDEGLVYSWGYG---LLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
L G VY+WG G LG G PKV S++ KV+
Sbjct: 739 AALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLR----------------DRKVKD 782
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLG--LGTVEDQP 329
L G A+T +Y WG+N YGQ+ LG + +P
Sbjct: 783 LSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPIISEP 821
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++H + +++G H I ++ +++G G+ G G D I DL
Sbjct: 4076 IQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKL-----IEDL 4130
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +I+D CG H+ +T +G +Y+ G G G+ G G ++Q P +V ++ +++
Sbjct: 4131 LGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA-LQDYKVID 4189
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L V+D +V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4190 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VVKVECGS 4248
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P + + L G+ K+ S+ G
Sbjct: 4249 QFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKV-AALQGK-------KIISIATG 4299
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A ++ G ++ WG N GQLG GT P V A+ G+K
Sbjct: 4300 SLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKK 4344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G TLF+ ++ GK+Y+CG G +G+ GLG NN + P L + I+ V + S
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKK---VAVHS 3106
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + P+++ K RI D+A G
Sbjct: 3107 GGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKS-KRIRDIACGSGHSAA 3165
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
+ G +Y+WG YG LG G ++++ +P L+ + L G +V + G
Sbjct: 3166 IASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQA-LIGH-------RVVQVACGSRDAQ 3216
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G++Y WG +G+LG G + PL V
Sbjct: 3217 TMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLV 3251
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI--VKLSSAV 187
+ G + TLF +T GK+YS G+GA G+ G+G ++ P L+ I+ I V +SS
Sbjct: 4032 LAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLES-IQHVFIKKVAVSSGG 4090
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+S +G V+ WG + G++ +++ P+++ GV IVD+A GG +
Sbjct: 4091 KHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGV-EIVDIACGGHHSAAIT 4149
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G +Y+WG YG LG G PKV +++ + G +G
Sbjct: 4150 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG--------------SG 4195
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ +++ WG YG+LG G + PLK+
Sbjct: 4196 DAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4233
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG G + N +L+ GL +LG+ D + P +LV + +
Sbjct: 3152 RIRDIACGSGHSAAIAS----NGELYTWGLGEYGRLGHGDTITQTRP-KLVQALI----- 3201
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---I 119
H Q+ + A T+ +T + +++G+ FG+ GRG G C+ +
Sbjct: 3202 -GHRVVQVA-CGSRDAQTMALTTDGYVYSWGDGDFGKLGRG--------GSDGCYTPLLV 3251
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEG 177
L ++ CG +L LT+ G+V++ WG LGH N+ P LV G + G
Sbjct: 3252 DRLNNLGVIQVECGAQFSLALTKYGEVWT--WGKGDYFRLGHGNDHHVRKPTLVEG-LRG 3308
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
++I+ ++ LAV+D G V+ WG++++GQ
Sbjct: 3309 KKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3340
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
H L LT+ G VYS G G G+ G G + + P L+ +E + I+ ++ A+S
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLE-KNIIFIACGSTYSAALSA 637
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVY 252
G+++ WG YG++ + TP +++ KG + +V VA SG S + G+V+
Sbjct: 638 NGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHT-VVHVACGSGDSQTLCVTASGIVF 696
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
SWG YG LG+G S P ++ L V + G A+T G +
Sbjct: 697 SWGDGDYGKLGRG-GTDGSKTPKIVDKLL--------DINVVKVFCGSQFSAALTAHGEV 747
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
Y WGK +LG G+ E +P
Sbjct: 748 YTWGKGDAYRLGHGSEEHVRYP 769
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+ H+A +G + T+ +T + F++G+ +G+ GRG G + L +
Sbjct: 674 VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG-----GTDGSKTPKIVDKLLDINV 728
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ CG + LT G+VY+ G G + G G + P ++ + ++ LS
Sbjct: 729 VKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-LRDRKVKDLSVGT 787
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+LA+++ V+GWG ++YGQI + I + L ++ +ASG
Sbjct: 788 THILALTEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASG 838
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ G ++GWG++ GQ+ E ++ P + C+ +S R + +A G
Sbjct: 3985 DWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLP---APCESLSALRPIQLAGGEQTLFA 4041
Query: 245 LNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ +G +YS GYG LG G S M PTL+ S QH F K V S G
Sbjct: 4042 VTADGKIYSTGYGAAGRLGIGGTDS-VMIPTLLESI---QHVFIKKVAVSS---GGKHCI 4094
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
A+++ GH+Y WG+ G+LG G
Sbjct: 4095 ALSSEGHVYSWGEGDDGKLGHG 4116
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQ 283
K ++ I A G + D G VYSWG G LG G +S +P LI + L
Sbjct: 566 KPITMIASHADGKHYLALTQD-GCVYSWGNGDGGRLGHGDTISYD-EPKLIEALL----- 618
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + + G A++ G LY WG+ YG+LG G +D P V
Sbjct: 619 ---EKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLV 666
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 32/229 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ACG G + D N+ +G G G D ++PL
Sbjct: 4186 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG-------------CKVPLK 4232
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+ + + + G ++ +T + +T+G + + G G +D+ + +A
Sbjct: 4233 IDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT---DDHVRR--PRKVAA 4287
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G+KI+ G H + ++ G+V++ G +GQ G G + P LV ++G++I
Sbjct: 4288 LQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA-LQGKKIT 4346
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS 230
+++ LA W ++ Q S M STP K +S
Sbjct: 4347 RVACGSAHTLA---------WSTAKATQ---SRMPASTPMEYDLVKDLS 4383
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 605 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 652
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 653 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 704
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 705 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 763
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 764 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 822
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 823 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 873
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 903
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 693 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 742
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 743 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 795
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 796 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 854
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 855 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 912
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 1632 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 1686
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 1687 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 1745
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 1746 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 1804
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 1805 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 1855
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 1856 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 1895
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 590 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 648
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 649 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 707
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 708 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 759
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T+ G ++ WG +G+LG G E P +
Sbjct: 760 -ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 792
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 1684 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 1734
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 1735 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 1786
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 1787 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 1845
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 1846 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 1902
Query: 240 SACTM 244
SA T+
Sbjct: 1903 SAHTL 1907
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 1548 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 1601
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 1602 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 1660
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 1661 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 1719
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 1720 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 1772
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 1773 GGSDGCKVPMKI 1784
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 1536 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 1590
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 1591 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 1650
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 1651 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 1701
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 1702 AGDLYTWGKGRYGRLGHSDSEDQLKP 1727
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 1798 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 1852
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 1853 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 1910
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 851 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 905
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 906 RVACGSSHSVAWT 918
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 25/271 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI--------VQEEDYQGKWFCHNIAD 121
K +A G H IT + +T+GN G+ G ++ +YQ + +
Sbjct: 114 FKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPE 173
Query: 122 LE--GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L K+ G T+ L+E G VYS G G G N + P + + +
Sbjct: 174 LVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGY-QTKNVDEPTF-KQIPDLKN 231
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASG 238
IV++ S D +A+ G++F WG++ +GQ+ + S + TP+ Q KG+ +I + G
Sbjct: 232 IVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQ---QIKGLPKIKQFSCG 288
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+ +G++Y+WG+G GQ S+ PT H+ ++ + G
Sbjct: 289 EQFIGALSTDGVLYTWGFGGDGQLGTPSKQDIPT--------PHKIQFDQNIDKVSCGQA 340
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
G ++ LYM G+ + GQLG G+ + P
Sbjct: 341 HVGIVSK-NKLYMHGRGKEGQLGRGSETESP 370
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 138/347 (39%), Gaps = 44/347 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI I FT S+++ L+ G N+ QLG + + +P +LV
Sbjct: 10 LKIAFIGSSVTFTSSFVFSQEQ---LYAWGWNNFGQLGIGNSISQYSP-QLV-------- 57
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P + +A + + I + +T+G + FG G G V+ + C D
Sbjct: 58 ----PIQDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLD 113
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE--- 178
+ CG H +T G++Y+ G G+ G N+ + P + E +
Sbjct: 114 FKF-----VACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGS 168
Query: 179 ----RIVKLSSAVDCV-------LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
+V+L+ V V + +S+ G+V+ G ++ G + + P Q
Sbjct: 169 AKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDEP-TFKQIP 227
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+ IV + SG L+ +G +++WG GQ T PS + Q
Sbjct: 228 DLKNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQ--------LGTPSPSVVQTPQQIKGL 279
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K++ G GA++ G LY WG GQLG + +D P P K+
Sbjct: 280 PKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQDIPTPHKI 326
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 140/316 (44%), Gaps = 30/316 (9%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G N LG H P K E + S V+ VK I A G H + + D
Sbjct: 59 LFTWGWNQRGTLG-HPPETK---TENIPSQVKALANVK-----IVQAAIGGWHCLAVDDQ 109
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM--DAVCGQDHTLFLTESG 144
A+ +G N +GQCG ++E + I K++ G H++ LT G
Sbjct: 110 GRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREG 169
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S WG G + P V+G +E R++ + + + LA+ + G ++ WGN
Sbjct: 170 HVWS--WGQPWPPG--DIKQISIPVRVQG-LENVRLIAVGAFHN--LALEENGTLWAWGN 222
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
+EYGQ+ + Q + + Q +VD+A+GG T L D+G VY WG +G LG
Sbjct: 223 NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGF 282
Query: 262 GPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G S M P + + L G+ + + G A+T G ++ +G+ +G+L
Sbjct: 283 GDNDKSSKMLPQKV-NLLAGE-------DIIQVSCGGTHSVALTRDGRIFSFGRGDHGRL 334
Query: 321 GLGTVEDQPFPLKVAV 336
G G PL V V
Sbjct: 335 GCGRKVTTGQPLDVPV 350
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
+ S V + G G DGQ GLG + +E C+V +E + + S LA+ D G +
Sbjct: 1 MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEA-LEPYAVRSVVSGSRNSLAICDDGTL 59
Query: 200 FGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG-- 255
F WG ++ G + + T + SQ K ++ +IV A GG C ++D+G Y+WG
Sbjct: 60 FTWGWNQRGTLGHPP-ETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
YG G+ P +P + + + PK V + AG +T GH++ WG+
Sbjct: 119 EYGQCGEEPGKDEMERP--LRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQ 176
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4146
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4205
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4206 VVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4264
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4265 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4316
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4317 NSEGQLGLG 4325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4016 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4070
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4071 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4129
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4130 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4186
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4187 IGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4240 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4286
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4240 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4294
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4295 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4349
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 44/335 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +A GY +++ + + ++ CG NS QLG + P PV
Sbjct: 125 VRAVAGGYQYSL----ALHADGTVWACGSNSAGQLGNGTTAAR-----------SAPRPV 169
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S + +A G +H + + + + +GNN +GQ G G + L+
Sbjct: 170 PGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATP-----VQVPGLQ 223
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ G H+L L G V++ G+ GQ G G + TP V G ++V +
Sbjct: 224 G--VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGL---SQVVSV 278
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSAC 242
++ LA+ G V+ WGN+ +GQ+ E+ +ST R + +G+ +V VA G
Sbjct: 279 AAGGFHSLALCADGTVWAWGNNGFGQLGEA---VSTQRTKPGRVEGLREVVAVAGGFYHS 335
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ G ++SWG G LG G S S +P + V S+ AG
Sbjct: 336 LAVRAGGSLWSWGNNYSGQLGNG-SFSSSARPAPVQGL----------GAVTSVAAGGMH 384
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG+N+ GQLG ++ P++V
Sbjct: 385 SVAVQADGTVWAWGRNEEGQLGHERAPERATPVRV 419
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 22/226 (9%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSF 97
G++D + GN + V P PV P +Q+ +A G H++ + + + +GNN F
Sbjct: 248 GFNDYGQLGN-----GTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGF 302
Query: 98 GQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLFLTESGKVYSCGWGADGQ 156
GQ G + + G+ +EG + + AV G H+L + G ++S G GQ
Sbjct: 303 GQLGEAVSTQRTKPGR--------VEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQ 354
Query: 157 TGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEM 215
G G ++ P V+G + +++ +AV G V+ WG +E GQ+ E
Sbjct: 355 LGNGSFSSSARPAPVQGL---GAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAP 411
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ +TP + G+ V VA+G + G +++WG GQ
Sbjct: 412 ERATP---VRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 454
>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
Length = 520
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + + L E I+ A CG++HT
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLVEGLSHEVIVSAACGRNHT 212
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 213 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 271
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 331
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 332 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 384
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 385 SQIYAGYTCSF-AVSEVGGLFFWG 407
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 90 FTFGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLT 141
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 105 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLIT 164
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GK++S G GQ G G E P LV G + E IV + + LA+++ G VF
Sbjct: 165 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEG-LSHEVIVSAACGRNHTLALTETGSVFA 223
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+G ++ GQ+ + P I +A G +++ +G +YS+G YG
Sbjct: 224 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 283
Query: 259 LGQ---GPKVSRSMK------------PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
LG G ++R+ + I T GQ P V + G +
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ ++ WG YG+LG +D+ P V +
Sbjct: 344 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 376
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 160
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P L+ H+ + S G
Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLVEGL---SHEV-----IVSAACGRNH 211
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 212 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 252
>gi|146183959|ref|XP_001027449.2| RCC1-like protein, HECT domain [Tetrahymena thermophila]
gi|146143420|gb|EAS07207.2| RCC1-like protein, HECT domain [Tetrahymena thermophila SB210]
Length = 979
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 33/277 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
QIK + G+ HT+ IT++ +T+G +G G G + + D NI L+ +KI+
Sbjct: 97 QIKKMVCGKKHTVFITEDGKIYTYGIGEYGSLGHGGILQLD-----IPKNILKLQEKKII 151
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE------GERIVK 182
CG+ HTL LTE+ +YS G G +GQ G G ++ PC V+ E G I K
Sbjct: 152 QVACGEFHTLALTETFDLYSWGRGFEGQLGTGK-DSSSVPCYVKFFYEKYDMKNGADIKK 210
Query: 183 LSSAVDC----VLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
+ C LA++D G ++ WG + GQ + + P +++ + + D
Sbjct: 211 RIKFITCGAYHSLAITDSGQLYSWGEARLGQTGTGKKKSEPYPVIVNLNAQPNSMFDKRV 270
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
M + + L P IPS +Q N K+ + G
Sbjct: 271 NTEQNQMSGVNKIELQHNHDELKINP----------IPSG----NQNN--QKIICVSGGY 314
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AIT G LY WG N GQLG+ + +P +V
Sbjct: 315 GHTVAITEEGELYSWGFNTKGQLGMEGTKSLYYPQRV 351
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 48/348 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV T+ K++ G+ LG+ G L+L IP
Sbjct: 97 QIKKMVCGKKHTVFITEDG----KIYTYGIGEYGSLGH------GGILQL-----DIPKN 141
Query: 63 V-KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE------EDYQGKWF 115
+ K +I +A G HT+ +T+ +++G GQ G G + + K+
Sbjct: 142 ILKLQEKKIIQVACGEFHTLALTETFDLYSWGRGFEGQLGTGKDSSSVPCYVKFFYEKYD 201
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
N AD++ ++I CG H+L +T+SG++YS G GQTG G ++ P
Sbjct: 202 MKNGADIK-KRIKFITCGAYHSLAITDSGQLYSWGEARLGQTGTGKKKSEPYPV------ 254
Query: 176 EGERIVKLSSAVDCVL--AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
IV L++ + + V+ + + N Q + E++I+ + S + +I+
Sbjct: 255 ----IVNLNAQPNSMFDKRVNTEQNQMSGVNKIELQHNHDELKINP--IPSGNQNNQKII 308
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQHQFNPKSKVE 291
V+ G + +EG +YSWG+ GQ G + ++S+ P + + G N
Sbjct: 309 CVSGGYGHTVAITEEGELYSWGFNTKGQLGMEGTKSLYYPQRVKKDILG----NELPLFA 364
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
S G AI G+L+ WG G LG Q P K+ Q
Sbjct: 365 SAYCGYNNTFAID--GNLWSWGG---GNLGQKNDHFQDLPRKITENVQ 407
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 42/328 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L V IP + S+ + K +A +G H
Sbjct: 3013 KVYACGEATNGRLG----------LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 3062
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D+G
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEG 3173
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
VF WG+ ++G++ + + P+ + + G + + G L G+V++WG
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G V KP ++ L G+ K+ + G A+T+ G +Y WG
Sbjct: 3233 GDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYAWG 3283
Query: 314 KNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
N +GQ G GT P V + GQK
Sbjct: 3284 DNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 758
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 4050 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSAC 4108
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 4166
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4167 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4217
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4246
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4096
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4097 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4156 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4214
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4215 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4265
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4305
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4094 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4144
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4145 --GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4196
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4197 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4255
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4256 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4312
Query: 240 SACTM 244
SA T+
Sbjct: 4313 SAHTL 4317
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3946 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4000
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4061 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4111
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKP 4137
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4262
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4320
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|111220973|ref|YP_711767.1| BNR repeat-containing protein [Frankia alni ACN14a]
gi|111148505|emb|CAJ60176.1| BNR repeat domain protein (partial) [Frankia alni ACN14a]
Length = 385
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 30/321 (9%)
Query: 16 VATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT 75
+A + ++ G N D LG + P+++V + + +A
Sbjct: 1 MAASTAADHIGAAAWGFNPDGALGDGSTTTRLTPVQVV-----------GLTDGVTQVAA 49
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G H++V+ + +T G N G+ G G + G ++ L G I
Sbjct: 50 GGYHSVVLRSDGTVWTSGLNLNGELGDGTTTDRRTPGP-----VSGLTG--ITQIAANSH 102
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSD 195
TL L G V++ G + GQ G G + TP V G + G I ++ + LA+ +
Sbjct: 103 FTLALRSDGTVWAWGANSYGQLGDGSTRGRNTPVQVSG-LAG--ITQVDAGAAHGLALRN 159
Query: 196 KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ WG++E+GQ+ + S STP +Q G++ + +A+GG ++ +G V+ W
Sbjct: 160 DGTVWAWGDNEFGQVGDGSTTSRSTP---TQVSGLTGVTQIAAGGGHSLVVRGDGAVWGW 216
Query: 255 GYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G GQ G +R + + L G + + G GA + G ++ WG
Sbjct: 217 GLNRNGQLGDGTTRDSTTAVRAAGLTGVARIAAGETHSLALLG----GAGLSSGQVFAWG 272
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N GQLG T D+ P+++
Sbjct: 273 DNSSGQLGDRTRTDRVTPVRI 293
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+ + G H++ L G V++ G +G+ G G ++ TP V G I +++
Sbjct: 42 DGVTQVAAGGYHSVVLRSDGTVWTSGLNLNGELGDGTTTDRRTPGPVSGLTG---ITQIA 98
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ LA+ G V+ WG + YGQ+ + + V Q G++ I V +G +
Sbjct: 99 ANSHFTLALRSDGTVWAWGANSYGQLGDGSTRGRNTPV--QVSGLAGITQVDAGAAHGLA 156
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L ++G V++WG +G +G G SRS PT Q + + V + AG
Sbjct: 157 LRNDGTVWAWGDNEFGQVGDGSTTSRS-TPT----------QVSGLTGVTQIAAGGGHSL 205
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ G ++ WG N+ GQLG GT D ++ A
Sbjct: 206 VVRGDGAVWGWGLNRNGQLGDGTTRDSTTAVRAA 239
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 109/286 (38%), Gaps = 42/286 (14%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ IT IA FT+ A +S ++ G NS QLG R + P++ V I
Sbjct: 91 LTGITQIAANSHFTL-ALRSDGT---VWAWGANSYGQLGDGSTRGRNTPVQ-VSGLAGI- 144
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
TQ+ G AH + + ++ + +G+N FGQ G G ++
Sbjct: 145 -------TQVD---AGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSRSTP-----TQVS 189
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G + G H+L + G V+ G +GQ G G + T G RI
Sbjct: 190 GLTG--VTQIAAGGGHSLVVRGDGAVWGWGLNRNGQLGDGTTRDSTTAVRAAGLTGVARI 247
Query: 181 VKLSSAVDCVL--AVSDKGDVFGWGNSEYGQISE-----------------SEMQISTPR 221
+ +L A G VF WG++ GQ+ + + S +
Sbjct: 248 AAGETHSLALLGGAGLSSGQVFAWGDNSSGQLGDRTRTDRVTPVRIPGLPPAGATTSAAQ 307
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
+G + +A+G L +G V++WG LG G + +R
Sbjct: 308 GSGAAQGPRSVTQIATGNLHSLALLSDGTVWAWGRYPLGDGTETTR 353
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 141 TESGKVYSCGWG--ADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
T + + + WG DG G G + TP V G +G + ++++ + + G
Sbjct: 5 TAADHIGAAAWGFNPDGALGDGSTTTRLTPVQVVGLTDG--VTQVAAGGYHSVVLRSDGT 62
Query: 199 VFGWG---NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
V+ G N E G + ++ + P G++ I +A+ L +G V++WG
Sbjct: 63 VWTSGLNLNGELGDGTTTDRRTPGP-----VSGLTGITQIAANSHFTLALRSDGTVWAWG 117
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LG G R+ Q + + + + AG A+ N G ++ W
Sbjct: 118 ANSYGQLGDGSTRGRNTPV-----------QVSGLAGITQVDAGAAHGLALRNDGTVWAW 166
Query: 313 GKNQYGQLGLGTVEDQPFPLKVA 335
G N++GQ+G G+ + P +V+
Sbjct: 167 GDNEFGQVGDGSTTSRSTPTQVS 189
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 191 LAVSDKGDVFG---WGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A S D G WG + G + + + +++ +V+ GV++ VA+GG +L
Sbjct: 1 MAASTAADHIGAAAWGFNPDGALGDGSTTTRLTPVQVVGLTDGVTQ---VAAGGYHSVVL 57
Query: 246 NDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G V++ G L LG G R + S L G Q S A
Sbjct: 58 RSDGTVWTSGLNLNGELGDGTTTDRRTPGPV--SGLTGITQIAANSHFTL---------A 106
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + G ++ WG N YGQLG G+ + P++V+
Sbjct: 107 LRSDGTVWAWGANSYGQLGDGSTRGRNTPVQVS 139
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 20/240 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 2849 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 2898
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F+ G+ + G G + +G NI L
Sbjct: 2899 -GHRVIQVA-CGSRDAQTLALTDEGLVFSLGDGDLWKIGPG----PEVKGCNIPQNIERL 2952
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV- 181
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2953 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVA 3011
Query: 182 -KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
S A+ C LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3012 CSCSGALHC-LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3070
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3786 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 3840
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 3841 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 3899
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 3900 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 3958
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 3959 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4009
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4010 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4049
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 18/230 (7%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I L+ ++I D CG H+ LT SG++Y+ G G G+ G G Q P +V+ + G
Sbjct: 2842 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGH 2900
Query: 179 RIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQ-ISTPRVLSQCKGVSRIVD 234
R+++++ S LA++D+G VF G+ + +I E++ + P+ + + G +
Sbjct: 2901 RVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQG-VCQ 2959
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+ G L G+V++WG Y LG G V KP ++ K V
Sbjct: 2960 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVV-------EGLRGKKIVA 3011
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+G A+T+ G +Y WG N +GQ G GT P V + GQK
Sbjct: 3012 CSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3061
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 3838 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 3888
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 3889 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 3940
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 3941 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 3999
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4000 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4056
Query: 240 SACTM 244
SA T+
Sbjct: 4057 SAHTL 4061
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3702 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 3755
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 3756 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 3814
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 3873
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 3874 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 3926
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 3927 GGSDGCKVPMKI 3938
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3690 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3744
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3745 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3804
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 3805 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 3855
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 3856 AGDLYTWGKGRYGRLGHSDSEDQLKP 3881
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G T F GKV+S G G DG+ LGH + P L+ ++ +RI ++ A
Sbjct: 2808 GTSQTGFXPVDGKVFSWGEGDDGK--LGHFSRM--PRLIEA-LKTKRIRDIACGSSHSAA 2862
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG--SACTMLNDEG 249
++ G+++ WG EYG++ + P+++ G R++ VA G + L DEG
Sbjct: 2863 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEG 2921
Query: 250 LVYSWGYGLL---GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
LV+S G G L G GP+V P I L GQ V + G A+T
Sbjct: 2922 LVFSLGDGDLWKIGPGPEVKGCNIPQNI-ERLNGQ-------GVCQIECGAQFSLALTKS 2973
Query: 307 GHLYMWGKNQYGQLGLGT 324
G ++ WGK Y +LG G+
Sbjct: 2974 GVVWTWGKGDYFRLGHGS 2991
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
KV+S WG + + LG L N++ E + +V+++ + AV+ +G V+ G
Sbjct: 2711 KVFS--WGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2768
Query: 204 NSEYGQ-----ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
+ IS + I + + V + V V SG S +G V+SWG G
Sbjct: 2769 EATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGD 2828
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
G+ SR P LI + ++ + G A+T+ G LY WG +YG
Sbjct: 2829 DGKLGHFSR--MPRLIEAL--------KTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2878
Query: 319 QLGLG--TVEDQPFPLKVAVG 337
+LG G T + +P +KV +G
Sbjct: 2879 RLGHGDNTTQLKPKMVKVLLG 2899
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 35/163 (21%)
Query: 131 VCGQDHTLF-LTESGKVYSCG----WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
V G +LF +T GKVY+CG W A GLG +++ P I I LSS
Sbjct: 2748 VAGGSKSLFAVTVEGKVYACGEATKWPA---WGLG-ISSGTVP------IPHGXITALSS 2797
Query: 186 AVDCVLAVSD----------KGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVD 234
V +AV G VF WG + G++ S M PR++ K RI D
Sbjct: 2798 YVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALK-TKRIRD 2852
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+A G S L G +Y+WG YG LG G ++ +KP ++
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV 2894
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 3952 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4006
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4007 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4064
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVL-----VAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP PS L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 758
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 150/328 (45%), Gaps = 42/328 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L V IP + S+ + K +A +G H
Sbjct: 3014 KVYACGEATNGRLG----------LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 3063
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHTLF 139
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3064 LTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3115
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKG 197
+T SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D+G
Sbjct: 3116 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEG 3174
Query: 198 DVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
VF WG+ ++G++ + + P+ + + G + + G L G+V++WG
Sbjct: 3175 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGK 3233
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
Y LG G V KP ++ L G+ K+ + G A+T+ G +Y WG
Sbjct: 3234 GDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDAGQVYAWG 3284
Query: 314 KNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
N +GQ G GT P V + GQK
Sbjct: 3285 DNDHGQQGNGTTTVNRKPTLVQGLEGQK 3312
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3102 RIRDIACGSSHSAAITSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3151
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3152 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3204
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3205 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3263
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3264 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3321
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 23/285 (8%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V+H + + +G H + ++ +++G G+ G G D + L
Sbjct: 4038 VQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVVESL 4092
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G +++D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V
Sbjct: 4093 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVD 4151
Query: 183 LS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGG 239
++ S L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4152 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGS 4210
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATG 4261
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4262 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4306
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 2999 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSG 3057
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3058 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3116
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3117 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3168
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3169 -ALTDEGLVFSWGDGDFGKLGRGGSE 3193
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4095 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4145
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4146 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4197
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4198 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4256
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4257 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4313
Query: 240 SACTM 244
SA T+
Sbjct: 4314 SAHTL 4318
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3959 YGWGHNHRGQLGG--IEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAVTADGKLYA 4012
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4013 TGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4071
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4072 DGKLGHGNRSPCDRPRVVESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4130
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4131 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4183
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4184 GGSDGCKVPMKI 4195
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E+ P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEV---IPVLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3947 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTL 4001
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4002 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSE 4061
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P ++ S L G +V + AG +T
Sbjct: 4062 GEVYSWGEAEDGKLGHGNR-SPCDRPRVVES-LRG-------IEVVDVAAGGAHSACVTA 4112
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4113 AGDLYTWGKGRYGRLGHSDSEDQLKP 4138
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +I C + L L+ SG+VY+ + +D P LV+G +
Sbjct: 446 CEGLASLGVTQI---ACAEKRFLILSRSGRVYTQAYNSDAL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
I+K+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + +IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEVIPVLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
I+ +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVA 599
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4263
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4264 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4321
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3260 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3314
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3315 RVACGSSHSVAWT 3327
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I ++ G AH + + + +T+G G+ G G I L G +
Sbjct: 87 ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAP-----INGLTGITAIS 141
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G +HTL L G ++S G GQ G G+ N P V G+I I +SS
Sbjct: 142 A--GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI---GITSISSGGGH 196
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
L + + G V+ WG + +GQ+ + TP Q G++ I++V++G T L +
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPH---QISGLNGIINVSAGVIHSTALKSD 253
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V++WG G L G K+ + IP Q N + + ++ AG AI +
Sbjct: 254 GTVWNWGCNFRGELANGNKID-----SYIPV------QANGLNGIIAITAGWEFSSAIKS 302
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++WG N YGQLG G+ D P++V+
Sbjct: 303 DGTFWVWGVNDYGQLGNGSKSDVTSPMQVS 332
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 29/287 (10%)
Query: 55 SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
S P P+ + T I ++ G HT+ + + +++G N +GQ G G +
Sbjct: 123 SLRTTPAPI-NGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIP--- 178
Query: 115 FCHNIADLEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ G+ I G H+L + G V+S G GQ G G +N TP + G
Sbjct: 179 -----LQVPGQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISG 233
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
+ G I+ +S+ V A+ G V+ WG + G+++ S V Q G++ I+
Sbjct: 234 -LNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPV--QANGLNGII 288
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ +G + + +G + WG YG LG G K S + Q + S +
Sbjct: 289 AITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSK-----------SDVTSPMQVSSLSGI 337
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
++ G A+ G+++ +G+N YGQLG GT P V++G
Sbjct: 338 TAIDTGATYTVALKTDGNIFAFGENTYGQLGNGTTTGSTTPELVSIG 384
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ +S+ +A+ + G V+ WG ++ G + + S V Q KG++ I +++G +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPV--QVKGLNGITAISAGWA 95
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L +G V++WG G G+ + S++ T P N + + ++ AG
Sbjct: 96 HFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAP--------INGLTGITAISAGWNHT 147
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G L+ WG+NQYGQLG G + PL+V
Sbjct: 148 LALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV 181
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4070 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4124
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4125 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4183
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4184 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4242
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4243 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4293
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4294 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4333
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4122 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4172
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4173 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4224
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4225 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4283
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4284 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4340
Query: 240 SACTM 244
SA T+
Sbjct: 4341 SAHTL 4345
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3986 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4039
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4040 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4098
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4099 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4157
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4158 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4210
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4211 GGSDGCKVPMKI 4222
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3974 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4028
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4029 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4088
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4089 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4139
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4140 AGDLYTWGKGRYGRLGHSDSEDQLKP 4165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4236 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4290
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4291 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4348
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4132
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG- 197
+T GK++S G G G+ GLG+ +N++ P V +EG ++ +++ ++ LAVS G
Sbjct: 4133 VVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSA-LEGHQVGQVACGLNHTLAVSADGM 4191
Query: 198 DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4192 TVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGNVYTFGQ 4250
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P +P+ L G +E + G +++ G +Y WG
Sbjct: 4251 DRLIGLPEGRARNHNRPQQVPA-LTGVF-------IEDVAVGAEHTLTLSSTGDVYAWGS 4302
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4303 NSEGQLGLG 4311
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ ++++ +T+G FG+ G G D + + D+ + + C
Sbjct: 511 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDIS--NVGEVSC 563
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P +V ++G I K+ + L
Sbjct: 564 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSL 622
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +R+VD++ G S C L+ + V
Sbjct: 623 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-ATTRVVDISIGDSHCLALSHDNEV 681
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 682 YAWGNNSMGQ 691
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 421 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRAIKKVSSSKGSDGHTLAFTS 470
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ ++
Sbjct: 471 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVS 522
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 523 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 579
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 580 SFGGGDNGKLGHGDTNRVYKPKVVEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 638
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI ++V + G A+++ +Y WG N G
Sbjct: 639 LGCGSSEATALRPKLIEEL--------ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMG 690
Query: 319 QLGLG 323
Q G G
Sbjct: 691 QCGQG 695
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + + Q
Sbjct: 387 KILQPKLAPSFSDAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLG---DSNNQSTLKK 443
Query: 117 HNIADLEGEKIMDAVCGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
K + + G D HTL T G+V+S G G G+ G G+ + Q+ P L++G +
Sbjct: 444 LTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 503
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
+G+ +V +S+ AVS+ G+++ WG ++G++ + ++ + + K +S + +V
Sbjct: 504 QGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEV 561
Query: 236 ASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+ G S L+ +G V+S+G G LG G +R KP ++ + Q F +
Sbjct: 562 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVVEAL---QGMF-----IR 612
Query: 292 SLIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 613 KVCAGSQSSLALTSTGQVYAWG 634
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4226 IKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRP-----QQVPALTGVFIED 4280
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L+ +G VY+ G ++GQ GLGH N+ P L+ ++G+ I ++S+
Sbjct: 4281 VAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISA-LQGKNIQQISA 4335
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC- 189
VCGQ+ T + +G V +CG G+ G+ G G+ ++ ++ ++G + ++ ++
Sbjct: 4018 VCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLTVISA-LQGFVVTQMVTSCGSD 4076
Query: 190 --VLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A+++ G+VF WG+ +YG++ S+ Q PR + +G +V ++ G ++
Sbjct: 4077 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQG-EEVVQMSCGFKHSAVV 4134
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G ++S+G YG LG G ++ + + S L G HQ V + G A
Sbjct: 4135 TSDGKLFSFGNGDYGRLGLGNTSNKKLPERV--SALEG-HQ------VGQVACGLNHTLA 4185
Query: 303 ITNFGH-LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ G ++ +G YG+LGLG + P KV V
Sbjct: 4186 VSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDV 4220
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 548 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 601
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
+ L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 602 VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 656
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ R+V +S LA+S +V+ WGN+ GQ + S I+ P+ + GV+ I
Sbjct: 657 LATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVA-I 715
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 716 QQISAGTSHSLAWTALPRDRQVVAW 740
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 409 CTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAF 468
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 469 TSEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 520
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ G LY WG+ +G+LG G + P V
Sbjct: 521 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 552
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DVF WG +GQ++E+ I P + S+ V G + ++ G V + G
Sbjct: 3981 KCDVFLWGAGRHGQLAEAGRNILVPTL---APSFSQAQQVVCGQNCTFVIQANGTVSACG 4037
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
YG LGQG S + + S L G F V S + + A+T G ++ W
Sbjct: 4038 EGSYGRLGQGN--SDDLHVLTVISALQG---FVVTQMVTSCGSDGHSM-ALTESGEVFSW 4091
Query: 313 GKNQYGQLGLGTVEDQPFPLKV 334
G YG+LG G + Q P ++
Sbjct: 4092 GDGDYGKLGHGNSDRQRRPRQI 4113
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGL 250
VS+ +V+ WG++ Q+ E ++ +I P++ I G CT +++ +G
Sbjct: 363 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTI----EAGQYCTFVISSDGS 418
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AIT 304
V + G YG LG G ++S L F P ++ + + + G A T
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLKKLT---------FEPHRAIKKVSSSKGSDGHTLAFT 469
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ G ++ WG YG+LG G Q +P
Sbjct: 470 SEGEVFSWGDGDYGKLGHGNSSTQKYP 496
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHNLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PRV+ + + I+ V+ G L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDAVAVPRVIQKLNQQT-ILQVSCGNWHSLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L ED+ P V +
Sbjct: 224 LSDEEDRESPCHVKL 238
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H + ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIVHVACGESHNLALSDRGQLFSWGAGSDGQL--GLMTTEDAVA--VPRVIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H+L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG+ H L L++ G+++S G G+DGQ GL + V ++ + I+++S
Sbjct: 89 VACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWH 148
Query: 190 VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L+
Sbjct: 149 SLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFALS 206
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G V+ WG GQ + + L KV + G +T
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ------KVVYISCGEEHTAVLTKS 260
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4150
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4151 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4209
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4210 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4268
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4269 DRLIGLPEGRARNHNRPQQIP-LLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4320
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4321 NSEGQLGLG 4329
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4020 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4074
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4075 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4133
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4134 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4190
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4191 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4241
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ +
Sbjct: 4242 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPL 4290
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4244 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPLLAGVIIED 4298
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4299 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4353
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|350419254|ref|XP_003492121.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Bombus impatiens]
Length = 727
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 2/235 (0%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
++G NS GQ G+GI EE + LE +KI V G HTL L +SG+VYSC
Sbjct: 6 MSWGANSHGQLGQGIESEECVLPCEVDLSKCSLEPKKIKKIVGGAGHTLILDDSGRVYSC 65
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
GW GQ G ++ + + +++ + IV ++ DC A++ +G + WG++ +GQ
Sbjct: 66 GWNNKGQVGFPTKDSILSFRELNEKLKNKVIVDIACGWDCSAALTIEGTLLLWGSNRFGQ 125
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM 269
+ + + + +I ++ G +L ++ + G G GQ +
Sbjct: 126 LGKHPNSLQWTHEPFEVVTGRKIKGISMGLRHTVLLTEDCKILVAGTGSKGQLGLSFSNS 185
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
K +L + F + S +ES+ G A+ G++Y +G N+YGQLGL T
Sbjct: 186 KGSLNAAYSFT--EVLTLSDIESVSCGQYHTIAVAKDGNIYAFGDNKYGQLGLNT 238
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 158/346 (45%), Gaps = 44/346 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI I G G T++ D + +++ CG N+ Q+G+ P K ++SF +
Sbjct: 42 KIKKIVGGAGHTLIL----DDSGRVYSCGWNNKGQVGF--PTKDS-----ILSFRELNEK 90
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+K+ I +A G + +T +G+N FGQ G+ +W +
Sbjct: 91 LKNKV--IVDIACGWDCSAALTIEGTLLLWGSNRFGQLGK-----HPNSLQWTHEPFEVV 143
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G KI G HT+ LTE K+ G G+ GQ GL N++ + + ++
Sbjct: 144 TGRKIKGISMGLRHTVLLTEDCKILVAGTGSKGQLGLSFSNSKGS---LNAAYSFTEVLT 200
Query: 183 LS--SAVDC----VLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV 233
LS +V C +AV+ G+++ +G+++YGQ+ +++ + P LS + +
Sbjct: 201 LSDIESVSCGQYHTIAVAKDGNIYAFGDNKYGQLGLNTDACPKTFIPIKLSDVQ-FKLPI 259
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
++ SG S +LND ++ WG YG LG + + KP++ +T + KV
Sbjct: 260 NMYSGWSHVIVLNDNN-IFGWGRNTYGQLG----IIKLEKPSIWKAT-----RIENLPKV 309
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ AG A+T G + WG N++G G G +D FP ++ +
Sbjct: 310 HRVSAGSEHNVALTENGEILCWGWNEHGNCGNGHTKDVKFPEQLVL 355
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 758
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3013 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 4050 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSAC 4108
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 4166
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4167 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4217
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4246
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4096
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4097 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4156 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4214
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4215 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4265
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4305
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4094 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4144
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4145 --GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4196
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4197 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4255
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4256 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4312
Query: 240 SACTM 244
SA T+
Sbjct: 4313 SAHTL 4317
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3946 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4000
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4061 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4111
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKP 4137
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
I+K+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
I+ +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4262
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4320
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4084
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4085 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGS 4143
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4144 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4202
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4203 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4254
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4255 NSEGQLGLG 4263
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 3954 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4008
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4009 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4067
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4068 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4124
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4125 IGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4175
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4176 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4224
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4178 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4232
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4233 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 37/338 (10%)
Query: 11 YGFTVVATKSKDK-----NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
Y + V S++ + LF G N LG+ K + V + V +
Sbjct: 41 YAVSAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGV------ 94
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-- 123
+I A G H + + D A+ +G N +GQCG ++ED + +I +
Sbjct: 95 ---KIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGT-RALRRDIPIPQRC 150
Query: 124 --GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
K+ G H++ LT+ G V++ WG G + N TP V+G E++
Sbjct: 151 ALKLKVRQVAAGGTHSVVLTQEGHVWT--WGQPWPP--GDIKNISTPVRVQGL---EQVS 203
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
++ LA+S ++ WGN+EYGQ+ + Q + + + +VD+A+GG
Sbjct: 204 MIAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWH 263
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L EG VY+WG +G LG G S M P Q Q + + G
Sbjct: 264 SAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPL--------QVQLLAGEDIVQVSCGGT 315
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+T+ G ++ +G+ +G+LG G P++V +
Sbjct: 316 HSVVLTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEVPI 353
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 41/261 (15%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+G+ GQ G G E+D I L+ + V G ++L + + G +++
Sbjct: 11 LAWGSGEDGQLGMGGCDEKDR-----ARCICALDAYAVSAVVAGSRNSLAICDDGSLFTW 65
Query: 150 GWGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
GW G LGH + +P V + G +IV+ + LAV DKG + WG +E
Sbjct: 66 GWNQRGT--LGHPPETKTESSPAHVDALV-GVKIVQAAIGGWHCLAVDDKGRAYAWGGNE 122
Query: 207 YGQI-SESEMQISTPRVL-------SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
YGQ E E + R L +C ++ VA+GG+ +L EG V++WG
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQ-- 180
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH-----LYMWG 313
P +K P + G Q S+IA GA N L+ WG
Sbjct: 181 ----PWPPGDIKNISTPVRVQGLEQV-------SMIA----VGAFHNLALSVDRILWAWG 225
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
N+YGQLG+G + + P++V
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRV 246
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 146 VYSCGWGADGQTGLGHLNNQETP-CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V + G G DGQ G+G + ++ C+ ++ + + + LA+ D G +F WG
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDRARCIC--ALDAYAVSAVVAGSRNSLAICDDGSLFTWGW 67
Query: 205 SEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
++ G + E++ + S+P + GV +IV A GG C ++D+G Y+WG YG
Sbjct: 68 NQRGTLGHPPETKTE-SSPAHVDALVGV-KIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQ 125
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G+ P+ L Q + K KV + AG +T GH++ WG+
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQ-RCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQ 180
>gi|115376656|ref|ZP_01463885.1| putative RTX family exoprotein [Stigmatella aurantiaca DW4/3-1]
gi|310824994|ref|YP_003957352.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115366337|gb|EAU65343.1| putative RTX family exoprotein [Stigmatella aurantiaca DW4/3-1]
gi|309398066|gb|ADO75525.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 769
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 145/337 (43%), Gaps = 41/337 (12%)
Query: 6 DIA-CGYGFTVVATKSKDKNLKLFGCGL------NSDSQLGYHDPRKKGNPLELVMSFVR 58
D+A G G +VA + LF GL N+ QLGY+ + G+ E + S+
Sbjct: 431 DVALVGVGAKIVA--GANHTCALFDTGLLRCWGENTYGQLGYNTTQHVGDG-EAIASYGY 487
Query: 59 IP---LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE-DYQGKW 114
+ + VK LA G +HT + D +G N++GQ G G Q D + W
Sbjct: 488 VNVGGIAVK--------LAAGGSHTCALMDTGKVRCWGRNNYGQLGYGNTQNVGDNEQPW 539
Query: 115 FCHNIADLE-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN---QETPCL 170
++ D++ G + D V G HT L ++GKV G+ A+G+ G GH N E P +
Sbjct: 540 ---SVGDVQVGGTVKDIVAGAYHTCVLLDTGKVRCWGYNANGELGYGHATNIGDNELPSV 596
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGV 229
G +++LS++ AV G V WG + GQ+ IS P
Sbjct: 597 AGDVNMGGNVLQLSTSFHSTCAVLTTGFVRCWGYNNVGQLGYGHASSISVPASAGDVNTG 656
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+++ VA+G + L G + WG G LG G +++ P+ + L G +
Sbjct: 657 GKVLQVAAGEAHTCALLSSGGIKCWGAGNEGRLGYGNTNQQTVPPSTVVD-LDGATAYQ- 714
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ G A+ + G WG N YGQLG G
Sbjct: 715 ------VTVGSAHTCALLSTGAARCWGWNAYGQLGYG 745
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 108/280 (38%), Gaps = 24/280 (8%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG-IVQEEDYQGKWFCHNIADL-E 123
P T + G AHT V+ +N +G + FGQ G G D + + ++A +
Sbjct: 378 PVTGFNSIRAGNAHTCVLFNNGTMRCWGRSQFGQLGYGNTFNIGDNEKPYTAGDVALVGV 437
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG---HLNNQETPCLVRGEIEGERI 180
G KI V G +HT L ++G + G GQ G H+ + E G
Sbjct: 438 GAKI---VAGANHTCALFDTGLLRCWGENTYGQLGYNTTQHVGDGEAIASYGYVNVGGIA 494
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ----ISTPRVLSQCKGVSRIVDVA 236
VKL++ A+ D G V WG + YGQ+ Q P + + + D+
Sbjct: 495 VKLAAGGSHTCALMDTGKVRCWGRNNYGQLGYGNTQNVGDNEQPWSVGDVQVGGTVKDIV 554
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQG--PKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+G +L D G V WGY G LG G + + P++ G + +
Sbjct: 555 AGAYHTCVLLDTGKVRCWGYNANGELGYGHATNIGDNELPSVAGDVNMGGNVLQLSTSFH 614
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
S A+ G + WG N GQLG G P
Sbjct: 615 STC-------AVLTTGFVRCWGYNNVGQLGYGHASSISVP 647
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 16/180 (8%)
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM----QISTPRVLSQ 225
+ G + G ++ +A CVL + G + WG S++GQ+ P
Sbjct: 374 VAEGPVTGFNSIRAGNAHTCVLF--NNGTMRCWGRSQFGQLGYGNTFNIGDNEKPYTAGD 431
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQF 284
V + +G + L D GL+ WG GQ G ++ + +
Sbjct: 432 VALVGVGAKIVAGANHTCALFDTGLLRCWGENTYGQLGYNTTQHVGDG---EAIASYGYV 488
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE-----DQPFPL-KVAVGG 338
N L AG A+ + G + WG+N YGQLG G + +QP+ + V VGG
Sbjct: 489 NVGGIAVKLAAGGSHTCALMDTGKVRCWGRNNYGQLGYGNTQNVGDNEQPWSVGDVQVGG 548
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST--QIKHLATGRAHTIVITDNEG 88
G N+ QLGY S + +P +T ++ +A G AHT + + G
Sbjct: 629 GYNNVGQLGYGH-----------ASSISVPASAGDVNTGGKVLQVAAGEAHTCALLSSGG 677
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+G + G+ G G ++ + DL+G G HT L +G
Sbjct: 678 IKCWGAGNEGRLGYGNTNQQTVPPS----TVVDLDGATAYQVTVGSAHTCALLSTGAARC 733
Query: 149 CGWGADGQTGLGH---LNNQETPCLVRGEIE 176
GW A GQ G G+ + + E P V G+I+
Sbjct: 734 WGWNAYGQLGYGNTTIIGDNELPS-VAGDIQ 763
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 525 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 579
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 580 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 638
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 639 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 697
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 698 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 735
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 2990 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3037
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3038 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3089
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3090 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3148
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3149 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3207
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3208 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDAGQVYA 3258
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3288
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3078 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3127
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3128 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3180
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3181 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3239
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3240 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3297
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 4027 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSAC 4085
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VDVA G G A T+ L D+
Sbjct: 4086 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDVACGSGDAQTLCLTDD 4143
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4144 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4194
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4195 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4223
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4019 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4073
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4074 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4132
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4133 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4191
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4192 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4242
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4243 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4282
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2975 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3033
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3034 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3092
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3093 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3144
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3145 -ALTDEGLVFSWGDGDFGKLGRGGSE 3169
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4071 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4121
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H + +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4122 --GHRVVDVA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4173
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4174 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4232
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4233 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4289
Query: 240 SACTM 244
SA T+
Sbjct: 4290 SAHTL 4294
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 543
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 544 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 599
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 600 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 648
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 649 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 678
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3923 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3977
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3978 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4038 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4088
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4089 AGDLYTWGKGRYGRLGHSDSEDQLKP 4114
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 423 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 468
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
I+K+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 528
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 529 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 581
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 582 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 618
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
I+ +A S G L G VYSWG G LG G V P P +
Sbjct: 473 IIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 527
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 528 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 576
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4185 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4239
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4240 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4297
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3236 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3290
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3291 RVACGSSHSVAWT 3303
>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
musculus]
gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
factor; AltName: Full=Deafness locus-associated putative
guanine nucleotide exchange factor; Short=DelGEF;
AltName: Full=Guanine nucleotide exchange factor-related
protein
gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
factor [Mus musculus]
gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
musculus]
Length = 464
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 132/315 (41%), Gaps = 33/315 (10%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
A+++ LF G NS QLG P +L F + + IK + G
Sbjct: 7 ASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQL-SDFCQ--------AGCIKSVTGG 57
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H+ V+TD F G N GQ G G E+ C L G I CG D
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLRGCPIRQVACGWDF 112
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVS 194
T+ LTE G+V SCG A GQ G+ H + C+V IE E++V +++ + LA +
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATT 169
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------LN 246
G VF WG + P L+ K SR+ + + + C + L
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLPLFLTA-KEPSRVTGLENSTAVCAVAGSDHSASLT 228
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
D G +Y WG GQ SR++ +P + + KV ++ +G A T
Sbjct: 229 DTGELYVWGRNKHGQ--LASRAV---FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTET 283
Query: 307 GHLYMWGKNQYGQLG 321
G ++ WG+ YGQLG
Sbjct: 284 GKVFTWGRADYGQLG 298
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ ++ CG N+ QLG H PRK +P
Sbjct: 103 IRQVACGWDFTIMLTEKG----QVLSCGSNAFGQLGVPHGPRK-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + T F +G GR + ++ + +
Sbjct: 148 IECLREKVVCVAAGLRHALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
LE + AV G DH+ LT++G++Y WG + G L ++ + IE
Sbjct: 207 TGLENSTAVCAVAGSDHSASLTDTGELYV--WGRNKH---GQLASRAVFLPLPQRIEAHY 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G VF WG ++YGQ+
Sbjct: 262 FQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQL 297
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 3013 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD--CVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGTRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 758
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ T A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGTRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G A
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGTRD-----AQTLA 3168
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVE 326
+T+ G ++ WG +G+LG G E
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4095
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4154
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ S P + G+ +V V G
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLG-VVKVECGSQFSVA 4213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4214 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4304
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4143
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4144 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGSKVPMKIDS 4195
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4196 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4254
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4255 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4311
Query: 240 SACTM 244
SA T+
Sbjct: 4312 SAHTL 4316
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LGLGT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGLGTEEHVRYP 701
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3957 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4010
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4069
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4129 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4182 GGSDGSKVPMKI 4193
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3945 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3999
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4110
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKP 4136
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4261
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4319
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|170581639|ref|XP_001895769.1| hypothetical protein [Brugia malayi]
gi|158597158|gb|EDP35375.1| conserved hypothetical protein [Brugia malayi]
Length = 916
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 31/322 (9%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
+ L +FGC D QLG+ + + +++ + P +K +A+G HT+
Sbjct: 4 RQLYVFGCA--GDGQLGFRPDSVESDSQMMIVPRLVYGAPTGQNGVTVKSIASGERHTLF 61
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
++D+ ++ G+N G+ GRG V+E G + + + I+ G+ H++ +++
Sbjct: 62 LSDDGKVWSCGSNYNGELGRGGVRE----GSYTIYPVHISSTVSIIQISAGRSHSMAVSD 117
Query: 143 SGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G++++ G + GQ + G + +TP V E V+++ ++++ G VF
Sbjct: 118 DGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFI 174
Query: 202 WGNSEYGQI----SESEMQISTP---RVLSQCK--GVSRIVDVASGGSACTMLNDEGLVY 252
WG G+I +E E+ IS P V++ C ++ +V V G S L EG V+
Sbjct: 175 WGQQSDGRIRHSPAEVEIFISIPIVQNVVNPCAVPNINSVVAVECGDSHSIALTHEGRVF 234
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
S G +G LG G + +RS + + G H V + G C + N G +
Sbjct: 235 SCGSDSFGQLGCG-QPNRSQNCMRGITEMLGSH-------VTRIACGRCHTIVVAN-GKM 285
Query: 310 YMWGKNQYGQLGLGTVEDQPFP 331
+ +G N GQLG G +Q P
Sbjct: 286 HTFGLNSNGQLGHGNTRNQITP 307
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 55/263 (20%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL----- 61
+ACG TV S + ++F G SD R + +P E+ + F+ IP+
Sbjct: 156 VACGASHTV----SLNGGGRVFIWGQQSDG-------RIRHSPAEVEI-FISIPIVQNVV 203
Query: 62 -PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P P+ + + G +H+I +T F+ G++SFGQ G G + + + I
Sbjct: 204 NPCAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG----QPNRSQNCMRGI 259
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
++ G + CG+ HT+ + +GK+++ G ++GQ G G+ NQ TP R
Sbjct: 260 TEMLGSHVTRIACGRCHTI-VVANGKMHTFGLNSNGQLGHGNTRNQITP----------R 308
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNS---------EYGQISESEMQISTPRVLSQCKGVS 230
++ V V A GW S Y +S + P+ LS +
Sbjct: 309 VIDSVENVASVFA--------GWDQSFCLQIHTKHAYDVLSGPSSYLQKPKYLS----LQ 356
Query: 231 RIVDVASGGSACTMLNDEGLVYS 253
RI D+ + G T++ + V+S
Sbjct: 357 RIRDLFAVGDKLTIIGELESVFS 379
>gi|432095555|gb|ELK26701.1| Secretion-regulating guanine nucleotide exchange factor, partial
[Myotis davidii]
Length = 442
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 117/261 (44%), Gaps = 22/261 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ +A G H+ V+TD F G N GQ G G +++ Y L G I
Sbjct: 31 VRRIAGGGGHSAVVTDGGSLFVCGLNKDGQLGLGHMEDVLYFTP-----CKSLIGCPIQQ 85
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAV 187
CG D T+ LTE+G+V SCG + GQ G+ H + C+V IE E +V +++ +
Sbjct: 86 VACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPGK---CVVPQAIELLKEEVVSIAAGL 142
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-----QCKGV--SRIVDVASGGS 240
LA + G VF WG + + P L+ + G+ S+ + V +G
Sbjct: 143 RHALAATASGIVFQWGTGLASSGRRLCPEQTLPLFLTAKEPGRVPGLENSKAICVVAGSD 202
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L D G +Y WG GQ ++ +P + H F K KV ++ +G
Sbjct: 203 HSASLADSGELYVWGSNKHGQ---LASQAAFLPVPQKIEA-HCFQ-KEKVTAVWSGWTHL 257
Query: 301 GAITNFGHLYMWGKNQYGQLG 321
A T G ++ WG+ YGQLG
Sbjct: 258 VAQTGTGKVFTWGRADYGQLG 278
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 151/365 (41%), Gaps = 55/365 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IA G G + V T LF CGLN D QLG +E V+ F +
Sbjct: 31 VRRIAGGGGHSAVVTDGGS----LFVCGLNKDGQLGLGH-------MEDVLYFTPCKSLI 79
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
P I+ +A G TI++T+N + G+NSFGQ G GK +L
Sbjct: 80 GCP---IQQVACGWDFTIILTENGQVLSCGSNSFGQLGV-----PHGPGKCVVPQAIELL 131
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
E+++ G H L T SG V+ WG + L ++T L E R+ L
Sbjct: 132 KEEVVSIAAGLRHALAATASGIVFQ--WGTGLASSGRRLCPEQTLPLFLTAKEPGRVPGL 189
Query: 184 -SSAVDCVLA-------VSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVD 234
+S CV+A ++D G+++ WG++++GQ++ + P ++ + C ++
Sbjct: 190 ENSKAICVVAGSDHSASLADSGELYVWGSNKHGQLASQAAFLPVPQKIEAHCFQKEKVTA 249
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP----TLIP------STLFGQ 281
V SG + G V++WG YG LG+ + +P + +P ST
Sbjct: 250 VWSGWTHLVAQTGTGKVFTWGRADYGQLGRKLESEEGWRPEKQGSPLPCSRPWESTPSSL 309
Query: 282 HQFNPKSKVESLIAGP--------CTFGAI----TNFGHLYMWGKNQYGQLGLGTVEDQP 329
H ++V S P C + T G Y WG N++G G G+ D
Sbjct: 310 HCLTGATEVSSAFLLPPFPLTVSWCHSPGLGTRPTPGGACYSWGWNEHGMCGDGSEADVQ 369
Query: 330 FPLKV 334
P V
Sbjct: 370 APKPV 374
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 524 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 578
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 579 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 637
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 638 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 696
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 697 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 734
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 2764 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2811
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 2812 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 2863
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 2864 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 2922
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 2923 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2981
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 2982 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3032
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3062
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 2852 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 2901
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 2902 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 2954
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2955 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3013
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3014 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3071
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3791 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 3845
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 3846 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 3904
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 3905 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 3963
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 3964 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4014
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4015 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4054
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 3843 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 3893
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 3894 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 3945
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 3946 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4004
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4005 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4061
Query: 240 SACTM 244
SA T+
Sbjct: 4062 SAHTL 4066
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2749 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 2807
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 2808 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 2866
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 2918
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2919 -ALTDEGLVFSWGDGDFGKLGRGGSE 2943
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3695 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3749
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
LAV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3750 LAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3809
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 3810 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 3860
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 3861 AGDLYTWGKGRYGRLGHSDSEDQLKP 3886
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 20/251 (7%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+N GQ G ++ + C +A L + + + G+ L +T GK+Y+
Sbjct: 3707 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATL---RPVQLIGGEQTLLAVTADGKLYAT 3761
Query: 150 GWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 3762 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAED 3820
Query: 208 GQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 3821 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3879
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ +KP L+ L G + +G +T+ ++ WG YG+LG G
Sbjct: 3880 SEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3932
Query: 324 TVEDQPFPLKV 334
+ P+K+
Sbjct: 3933 GSDGCKVPMKI 3943
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G + G G E P ++ G+ G+ +V ++ A
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 542
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 598
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 599 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 647
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 648 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 677
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A S G L G VYSWG G LG G V P P +
Sbjct: 472 VVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTV-----PLEEPKVISAFSGKQA 526
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 527 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 575
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 3957 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4011
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4012 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4069
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3010 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3064
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3065 RVACGSSHSVAWT 3077
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 35/310 (11%)
Query: 27 LFGCGLNSDSQLGYHDP--RKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
++ G N++ QLG D + K +P+ + + P+ + A G HT+V T
Sbjct: 137 VYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISI----------ACGANHTLVCT 186
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESG 144
+ +++G FG G G + ++ + +++ G + L +SG
Sbjct: 187 ERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSG 246
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+VY+CG GQ G+G + + P ++ ER+ ++ +L ++ +G V+ G
Sbjct: 247 RVYTCGQNDAGQLGIGGRDQENIPISIKKF--PERVSMIACGQMHLLMLTKQGTVYSCGA 304
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--G 262
+ +GQ+ + + S+ +L Q + VA+G + ++ D G +Y WG G+ G+
Sbjct: 305 NSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEFLT 364
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-AITNFGHLYMWGKNQYGQLG 321
P +++K + S G H FG A+ G +Y WG N G+LG
Sbjct: 365 PHRVKTIKGMTV-SVSIGNH-----------------FGIAVNQDGIVYSWGHNNSGELG 406
Query: 322 LGTVEDQPFP 331
G +++P P
Sbjct: 407 QGDFDERPTP 416
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 118/263 (44%), Gaps = 28/263 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K IACG T+V T+ D + +G G+ G D + + + I
Sbjct: 171 KPISIACGANHTLVCTERGD--VYSWGQGIFGALGAGNLDD-------QFLPKLIHISHD 221
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+Q+ ++ G + ++ + +T G N GQ G G +E+ +I
Sbjct: 222 QLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQLGIGGRDQENIP-----ISIKKF 276
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
E++ CGQ H L LT+ G VYSCG + GQ GL + N +P L++ +I +
Sbjct: 277 P-ERVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQ-DISHIPMRY 334
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ D GD++ WG+ +G + TP + KG++ V V+ G
Sbjct: 335 VAAGSFSASISYDSGDLYLWGSGVFG-------EFLTPHRVKTIKGMT--VSVSIGNHFG 385
Query: 243 TMLNDEGLVYSWGY---GLLGQG 262
+N +G+VYSWG+ G LGQG
Sbjct: 386 IAVNQDGIVYSWGHNNSGELGQG 408
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 90 FTFGNNSFGQCGRGIVQ-EEDYQGKWFC-HNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
F++G++ GQ G G Q + Y +C +NI I CG +H F+T VY
Sbjct: 85 FSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIG------IKYVSCGDEHAAFITTGNMVY 138
Query: 148 SCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
S G +GQ G+G L + +P LV ++ ++ + ++ + L +++GDV+ WG
Sbjct: 139 SMGSNTNGQLGVGDMSLKMKNSPMLVEALMD-QKPISIACGANHTLVCTERGDVYSWGQG 197
Query: 206 EYGQISESEMQIS-TPRVL----SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
+G + + P+++ Q S+++ V++G +L+ G VY+ G G
Sbjct: 198 IFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAG 257
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
Q R + I F + +V + G +T G +Y G N +GQL
Sbjct: 258 QLGIGGRDQENIPISIKKFPE-------RVSMIACGQMHLLMLTKQGTVYSCGANSFGQL 310
Query: 321 GLGTVEDQPFPLKV 334
GL + PL +
Sbjct: 311 GLNNKRNSSSPLLI 324
Score = 45.4 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+++ IACG ++ TK ++ CG NS QLG ++ R +PL L+ IP+
Sbjct: 279 RVSMIACGQMHLLMLTKQG----TVYSCGANSFGQLGLNNKRNSSSPL-LIQDISHIPM- 332
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+++A G + D+ + +G+ FG+ H + +
Sbjct: 333 --------RYVAAGSFSASISYDSGDLYLWGSGVFGEF-------------LTPHRVKTI 371
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+G + ++ G + + + G VYS G G+ G G + + TP ++
Sbjct: 372 KGMTVSVSI-GNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQII 419
Score = 45.4 bits (106), Expect = 0.041, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 198 DVFGWGNSEYGQISESEMQIS----TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
++F WG+ + GQ+ + QI PR + G+ V+ G + +VYS
Sbjct: 83 EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKY---VSCGDEHAAFITTGNMVYS 139
Query: 254 WGY---GLLGQGPKVSRSMK--PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G G LG G +S MK P L+ + + K S+ G T G
Sbjct: 140 MGSNTNGQLGVG-DMSLKMKNSPMLVEALM--------DQKPISIACGANHTLVCTERGD 190
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
+Y WG+ +G LG G ++DQ P
Sbjct: 191 VYSWGQGIFGALGAGNLDDQFLP 213
>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
Length = 464
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 130/315 (41%), Gaps = 33/315 (10%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
A+++ LF G NS QLG P +L F + + IK + G
Sbjct: 7 ASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQL-SDFCQ--------AGCIKSVTGG 57
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H+ V+TD F G N GQ G G E+ C L G I CG D
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLRGCPIRQVACGWDF 112
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVS 194
T+ LTE G+V SCG A GQ G+ H + C+V IE E++V +++ + LA +
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATT 169
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------LN 246
G VF WG + P L+ K SR+ + + + C + L
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLPLFLTA-KEPSRVTGLENSTAVCAVAGSDHSASLT 228
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
D G +Y WG GQ + + +P + + KV ++ +G A T
Sbjct: 229 DTGELYVWGRNKHGQ-----LASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTET 283
Query: 307 GHLYMWGKNQYGQLG 321
G ++ WG+ YGQLG
Sbjct: 284 GKVFTWGRADYGQLG 298
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ ++ CG N+ QLG H PRK +P
Sbjct: 103 IRQVACGWDFTIMLTEKG----QVLSCGSNAFGQLGVPHGPRK-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + T F +G GR + ++ + +
Sbjct: 148 IECLREKVVCVAAGLRHALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
LE + AV G DH+ LT++G++Y WG + G L ++ + IE
Sbjct: 207 TGLENSTAVCAVAGSDHSASLTDTGELYV--WGRNKH---GQLASRAVFLPLPQRIEAHY 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G VF WG ++YGQ+
Sbjct: 262 FQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQL 297
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|328874090|gb|EGG22456.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 464
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 135/330 (40%), Gaps = 51/330 (15%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F G N+ Q+G + P E M I+ +A GR+ +++T
Sbjct: 124 KIFMWGTNNHGQMGLPGNQVYRYPTESEM----------FKGLDIERVALGRSFLLILTK 173
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ G+N FGQ G ++ Q N+ D ++ G DH+ +T+SG
Sbjct: 174 QGKVLSIGSNEFGQLGISSQEQRGSQTLQVVQNLKD-----VVSMHAGFDHSFAVTKSGH 228
Query: 146 VYSCGWGADGQTG-----------LGHLNNQE---------------TPCLVRGEIEGER 179
+ G+ +GQ G G Q+ TP LV G +E +
Sbjct: 229 AFGWGYNVEGQLGQKIVEYERVEATGEEKQQDMHDLHKTMHPDAEYNTPTLVPG-MEAIK 287
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGG 239
+ K+ DC +S +G+V+ GN+E G + E I ++ + +I ++ G
Sbjct: 288 VAKVFCGYDCTFLLSARGNVYAMGNNETGTLGLGEDAIGRIAKATKVQLPEKIKSISCGA 347
Query: 240 SACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ L++ VY G+G LG G PTLIP F +++ KV+ + G
Sbjct: 348 THSMFLSESNKVYVCGWGAEGRLGLGNNTINRYVPTLIP--FFAENRI----KVDQVSCG 401
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+T G +Y WG + G+LG G E
Sbjct: 402 GAHSLLLTTDGRVYSWGCGEDGKLGHGDEE 431
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG-------------------YHDPR 44
+ + G+ + TKS FG G N + QLG HD
Sbjct: 210 VVSMHAGFDHSFAVTKSGHA----FGWGYNVEGQLGQKIVEYERVEATGEEKQQDMHDLH 265
Query: 45 KKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI 104
K +P + +P + ++ + G T +++ + GNN G G G
Sbjct: 266 KTMHPDAEYNTPTLVP---GMEAIKVAKVFCGYDCTFLLSARGNVYAMGNNETGTLGLG- 321
Query: 105 VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN- 163
ED G+ L EKI CG H++FL+ES KVY CGWGA+G+ GLG+
Sbjct: 322 ---EDAIGRIAKATKVQLP-EKIKSISCGATHSMFLSESNKVYVCGWGAEGRLGLGNNTI 377
Query: 164 NQETPCLVRGEIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV 222
N+ P L+ E ++ ++S L ++ G V+ WG E G++ + ++S
Sbjct: 378 NRYVPTLIPFFAENRIKVDQVSCGGAHSLLLTTDGRVYSWGCGEDGKLGHGDEELSNDPK 437
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDE 248
L Q + + +++G ++ E
Sbjct: 438 LIQFFENKKPIFISAGVDTSMVITTE 463
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ---IKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P + + +K +A +G H
Sbjct: 3016 KVYACGEATNGRLG------------LGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3063
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+ +T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3064 MALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3115
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
+T SG++YS G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3116 AAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3174
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3233
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3234 GKGDYFRLGHGTDV-HVRKPQVVEG-LRGK-------KIIHVAVGALHCLAVTDTGQVYA 3284
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G +++ + L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT-----IPMLVTGLK 602
Query: 124 GEKIMDAVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++ IV
Sbjct: 603 GLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDIV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+S +A++ G V+ WG + ++ +E + P++L +G +++DV +G +
Sbjct: 662 KVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-EKVIDVVAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ VYSWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVYSWGSNDQCQHFDTLRITKPD--PTALPG 758
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3104 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3153
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3154 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3206
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++I+
Sbjct: 3207 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIIH 3265
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4098
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G G +Q P LV ++G R++ ++ S
Sbjct: 4099 VDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGS 4157
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + GV +V V G
Sbjct: 4158 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VVKVECGSQFSVA 4216
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4217 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4267
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4268 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4307
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G+ ++ CG ++ +T G++Y+ G G G+ G G +Q P LV G ++G +++ +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDV 609
Query: 184 S--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGS 240
S S LAV++ G V+ WG+ +YG++ TP+++ + + + IV V+ G
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-IVKVSCGSQ 668
Query: 241 ACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
L +G VYSWG G LG G + + P L G KV ++AG
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTE-----EHVRYPKLLEGLQ----GEKVIDVVAGS 719
Query: 298 CTFGAITNFGHLYMWGKNQYGQ 319
A+T +Y WG N Q
Sbjct: 720 THCLALTEDSEVYSWGSNDQCQ 741
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 3001 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3118
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +YSWG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3119 TSSGELYSWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3170
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3171 -ALTDEGLVFSWGDGDFGKLGRGGSE 3195
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 27/247 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRI 59
I++ DIA G + T + D L+ G +LG+ D + P +E + + I
Sbjct: 4096 IEVVDIAAGGAHSACITAAGD----LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4152 DIAC----------GSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKI 4196
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++
Sbjct: 4197 DSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKK 4255
Query: 180 IVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
++ +++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + ++ +
Sbjct: 4256 VIAIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKINRVA 4312
Query: 238 GGSACTM 244
GSA T+
Sbjct: 4313 CGSAHTL 4319
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3948 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4002
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG IT
Sbjct: 4063 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDIAAGGAHSACITA 4113
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG G EDQ P
Sbjct: 4114 AGDLYTWGKGRYGRLGHGDSEDQLKP 4139
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3960 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4013
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4072
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VD+A+GG+ + G +Y+WG YG LG G
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHG 4131
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4132 DSEDQ-LKPKLV-EALQGYRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4185 GGSDGCKVPMKI 4196
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 46/278 (16%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A ++++ N +T NS D G ++A KI
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS------------DILGPQLVQSLASRNIVKIAA 501
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSA 186
G H L L +G+V+S G G G+ G G E P ++ G+ G+ +V ++
Sbjct: 502 HSDGH-HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG-GSACTM 244
A++ +G+++ WG YG++ + T P +++ KG+ +++DV+ G G A T+
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL-KVIDVSCGSGDAQTL 619
Query: 245 -LNDEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+ + G V+SWG YG LG+G PK+ ++ I G QF+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGS-QFSV------- 671
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 --------ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +I C + L L+ +G+VY+ + +D LG P LV+ +
Sbjct: 446 CEGLASLGVTQI---ACAEKRFLILSRNGRVYTQAYNSD---ILG-------PQLVQS-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+VF WG + G++ + + + P+++S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDQTIPMLVTGLKGL-- 604
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
K S +G A+T G ++ WG YG+LG G
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 223 LSQCKGVSRIVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPST 277
L Q IV +A S G L G V+SWG G LG G V +P +I S
Sbjct: 487 LVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMI-SA 544
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L G+ V + G AIT G LY WG+ YG+LG G+ EDQ P+ V
Sbjct: 545 LSGKQA---GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4264
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G++I +++ LA S
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKINRVACGSAHTLAWS 4322
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3262 KIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3316
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3317 RVACGSSHSVSWT 3329
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 26/254 (10%)
Query: 70 IKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
IK A G H + +T+ +++G+N + + G G + C N+ EK++
Sbjct: 78 IKTFAYGSGPHVLALTNKGEIYSWGHNGYCELGNGSTNQG--LTPTLCLNL----NEKVV 131
Query: 129 DAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
A+ CG H++ LTE G+VYS G GQ G +NQ P V + G+ +V ++
Sbjct: 132 TAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQ 191
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK--GVSRIV--DVASGGSACT 243
+AV+D G+VFGWG + GQ+ LS CK G++ IV VA G +
Sbjct: 192 TSSMAVTDVGEVFGWGYNGVGQLGIGNY----VNQLSPCKVTGLNGIVIEKVACGYAHTL 247
Query: 244 MLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L+DEG +Y W G+G LG G K + + P + T G+ S + +L +
Sbjct: 248 ALSDEGALYVWGGNGFGQLGLGNK-ANACTPIKLNVTEMGR-----ISDIATLHYNHISV 301
Query: 301 GAITNFGHLYMWGK 314
A+ G +YMWG+
Sbjct: 302 -AMGQGGKIYMWGQ 314
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+++T + + G+N+ G G G D + L G+ I G H L
Sbjct: 37 LIVTKDGDVYALGSNTAGCLGTG-----DSHSTLHPKKVEALCGKGIKTFAYGSGPHVLA 91
Query: 140 LTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC----VLAV 193
LT G++YS WG +G + G G N TP L E K+ +A+ C +A+
Sbjct: 92 LTNKGEIYS--WGHNGYCELGNGSTNQGLTPTLCLNLNE-----KVVTAIACGSHHSVAL 144
Query: 194 SDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
++ G+V+ WG + GQ+S PR ++ +V +A G ++ + D G V+
Sbjct: 145 TEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVF 204
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G V++ L P + G + +E + G A+++ G L
Sbjct: 205 GWGYNGVGQLGIGNYVNQ-----LSPCKVTGLNGI----VIEKVACGYAHTLALSDEGAL 255
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y+WG N +GQLGLG + P+K+ V
Sbjct: 256 YVWGGNGFGQLGLGNKANACTPIKLNV 282
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLSSAVDCVLAV 193
+ L +T+ G VY+ G G G G ++ P V +G + S VLA+
Sbjct: 34 NEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPH-VLAL 92
Query: 194 SDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSR--IVDVASGGSACTMLNDEGL 250
++KG+++ WG++ Y ++ S Q TP + C ++ + +A G L ++G
Sbjct: 93 TNKGEIYSWGHNGYCELGNGSTNQGLTPTL---CLNLNEKVVTAIACGSHHSVALTEDGE 149
Query: 251 VYSWGYGLLGQGPK--VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
VYSWG GQ S P + S L G+ V S+ G + A+T+ G
Sbjct: 150 VYSWGQNNCGQVSSGISSNQGAPRKVNSALTGK-------VVVSIACGQTSSMAVTDVGE 202
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N GQLG+G +Q P KV
Sbjct: 203 VFGWGYNGVGQLGIGNYVNQLSPCKV 228
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 27/276 (9%)
Query: 59 IPLPVKHPSTQ---IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+PLP + P + +K +A +G H + +T + F++G G+ G G D
Sbjct: 3059 VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-- 3116
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ L +KI D CG H+ ++ G++Y+ G G G+ G G Q P LV
Sbjct: 3117 ---RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA 3173
Query: 174 EIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVS 230
+ G R+V+++ S LA+++ G VF WG+ ++G++ + S TP + + G+
Sbjct: 3174 -LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+V + G L G V++WG Y LG G KP I L G+
Sbjct: 3233 -VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-QHVRKPQPI-GGLRGR------ 3283
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+V + G A+T+ G +Y WG N +GQ G G
Sbjct: 3284 -RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + +G G+ G G D + K H L G + D CG
Sbjct: 4143 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMSVADIACGS 4197
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL-GYRAIDIACGSGDAQTLC 4256
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ +V V G L G V
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGAV 4315
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+WG G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 4316 YTWGKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDSGE 4366
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+Y WG N GQLG GTV P VA
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRPRLVAA 4394
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++ GKVY+CG G +G+ GLG +N + P L + + + V + S
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVV---KKVAVHS 3080
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I DVA G S
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRA-KKIRDVACGSSHSAA 3139
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ +V + G
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLV-TALAGR-------RVVQVACGSRDAQ 3190
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 3191 TLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 3126 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNTTQLKP-KLVTALA----- 3175
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 3176 ----GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 3226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 3227 RLSGIGVVQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPI-GGLRGR 3283
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + I N A+++G + G G D + IA LE + CG ++
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHG-----DTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDCVLAVSDKG 197
+T G + + G G + G G+ +++ P LV + + V L S LA++ +G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
VF WG+ +YG++ S +L + + R+ V +G L+ EG +Y+WG
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPIL--VESLPRVQRVFAGSQFSVALSSEGQLYTWGKA 799
Query: 258 LLGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
V RS++ +P + QH+ ++ + A+++ G ++ WG+N
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQHK-----RIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 317 YGQLGLGTVEDQPF 330
Q+ +V +P
Sbjct: 855 SQQICPASVSSEPL 868
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG-N 204
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 4053 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 205 SEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
S + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 4110 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4169
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ N S V + G AIT GH+ WGK +YG+L
Sbjct: 4170 HGNRMSYD-RPKLV-------EHLNGMS-VADIACGSAHSAAITASGHVLTWGKGRYGRL 4220
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 4221 GHGDSEDQLRP 4231
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 24/257 (9%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G D +LG+ D + P +I +H ++ + G +++
Sbjct: 632 DSNHNAYSWGTGEDHRLGHGDTHARAVP-------TKIAALEQH---CVQSVYCGCSYSA 681
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ--DHTLF 139
IT T+G ++ + G G + + + L ++D G H+L
Sbjct: 682 AITCGGNLLTWGRGTYARLGHG-----NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLA 736
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G V++ G G G+ G G+ N P LV R+ ++ + +A+S +G +
Sbjct: 737 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL---PRVQRVFAGSQFSVALSSEGQL 793
Query: 200 FGWGNSEY--GQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + Q+ E +Q S PR++S + RIVDVA + C L+ G V+ WG
Sbjct: 794 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQH-KRIVDVAVSVAHCLALSSSGEVFGWGR 852
Query: 257 GLLGQGPKVSRSMKPTL 273
Q S S +P L
Sbjct: 853 NDSQQICPASVSSEPLL 869
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L +G AH++ +T F +G+ +G+ G G + G + L ++
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLP--RVQRVFA 779
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH------LNNQETPCLVRGEIEGERIVKLSSA 186
G ++ L+ G++Y+ WG T LGH + P LV ++ +RIV ++ +
Sbjct: 780 GSQFSVALSSEGQLYT--WGK--ATCLGHQLVERSVQGCSVPRLV-SSLQHKRIVDVAVS 834
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
V LA+S G+VFGWG ++ QI SE + TP ++S + + G AC
Sbjct: 835 VAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVS-------LPTFPASGIAC 887
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
T S G+ + P V +PT
Sbjct: 888 TSAQSLVWTQSSHQGVPRRAPFVVDLGEPTF 918
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G F + G G V K +A L+G+KI+ G
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK-----VAALQGKKIISIATGSL 4356
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + ++SG+VY+ G +GQ G G + + P LV ++G+ IVK++ LA+S
Sbjct: 4357 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV-AALQGKHIVKVTCGSAHTLALS 4414
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG F+V TKS ++ G +LG+ + VR P V
Sbjct: 4296 VVKVECGSQFSVALTKSG----AVYTWGKGDFHRLGHGS-----------VDHVRRPKKV 4340
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+I +ATG H + +D+ +T+G+N GQ G G V +A L
Sbjct: 4341 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP-----RLVAAL 4395
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
+G+ I+ CG HTL L+ S
Sbjct: 4396 QGKHIVKVTCGSAHTLALSTS 4416
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 4040 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 4096
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 4097 VTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 4150
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 4151 LTTEGEVYAWGEGEDGKLGHG 4171
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 251 VYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
YSWG G LG G +R++ PT I + QH V+S+ G AIT G
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAA--LEQH------CVQSVYCGCSYSAAITCGG 687
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+L WG+ Y +LG G +D+ P V
Sbjct: 688 NLLTWGRGTYARLGHGNSDDRSLPTLV 714
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3007 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3054
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3055 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3106
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3107 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3165
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3166 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3224
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3225 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3275
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3095 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3144
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3145 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3197
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3198 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3256
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3257 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3314
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4034 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4088
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4089 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4147
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4148 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4206
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4207 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4257
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4258 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4297
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2992 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3050
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3051 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3109
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3110 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3161
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3162 -ALTDEGLVFSWGDGDFGKLGRGGSE 3186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4086 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4136
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4137 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4188
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4189 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4247
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4248 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4304
Query: 240 SACTM 244
SA T+
Sbjct: 4305 SAHTL 4309
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3950 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4003
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4004 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4062
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4121
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4122 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4174
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4175 GGSDGCKVPMKI 4186
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3938 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3992
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3993 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4052
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4053 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4103
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4104 AGDLYTWGKGRYGRLGHSDSEDQLKP 4129
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4200 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4254
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4255 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4312
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3253 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3307
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3308 RVACGSSHSVAWT 3320
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 52/315 (16%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP--LPVKHPSTQIKHLA--TGRAHTI 81
K++ CG ++ +LG V V +P LPV H +K +A +G H +
Sbjct: 2694 KVYACGEGTNGRLGLG-----------VTHNVPLPHQLPVLHQYV-VKKVAVHSGGKHAL 2741
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D + L +KI D CG H+ ++
Sbjct: 2742 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAIS 2796
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
G++Y+ G G G+ G G Q P LV + G R+V+++ S LA+++ G V
Sbjct: 2797 SQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAV 2855
Query: 200 FGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
F WG+ ++G++ + S TP + + G+ +V + G L G V++WG
Sbjct: 2856 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQIECGAQFSLALTRAGEVWTWGKGD 2914
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK-------SKVESLIAGPCTFGAITNFGH 308
Y LG G QH P+ +V + G A+T+ G
Sbjct: 2915 YYRLGHGGD----------------QHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQ 2958
Query: 309 LYMWGKNQYGQLGLG 323
+Y WG N +GQ G G
Sbjct: 2959 VYAWGDNDHGQQGSG 2973
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 2781 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNTTQLKP-KLVTALA----- 2830
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 2831 ----GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 2881
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 2882 RLSGIGVVQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPI-GGLRGR 2938
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 2939 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2969
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++ GKVY+CG G +G+ GLG +N + P L + + + V + S
Sbjct: 2679 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVV---KKVAVHS 2735
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I DVA G S
Sbjct: 2736 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRA-KKIRDVACGSSHSAA 2794
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ +V + G
Sbjct: 2795 ISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLV-TALAGR-------RVVQVACGSRDAQ 2845
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 2846 TLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 2880
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + I N A+++G + G G D + IA LE + CG ++
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHRLGHG-----DTHARAVPTKIAALEQHCVQSVYCGCSYSA 335
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDCVLAVSDKG 197
+T G + + G G + G G+ +++ P LV + + V L S LA++ +G
Sbjct: 336 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 395
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
VF WG+ +YG++ S +L + + R+ V +G L+ EG +Y+WG
Sbjct: 396 LVFAWGDGDYGKLGNGNCNGSLQPIL--VESLPRVQRVFAGSQFSVALSSEGQLYTWGKA 453
Query: 258 LLGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
V RS++ +P + QH+ ++ + A+++ G ++ WG+N
Sbjct: 454 TCLGHQLVERSVQGCSVPRLVSSLQHK-----RIVDVAVSVAHCLALSSSGEVFGWGRND 508
Query: 317 YGQLGLGTVEDQPF 330
Q+ +V +P
Sbjct: 509 SQQICPASVSSEPL 522
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 24/257 (9%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G D +LG+ D + P +I +H ++ + G +++
Sbjct: 286 DSNHNAYSWGTGEDHRLGHGDTHARAVP-------TKIAALEQH---CVQSVYCGCSYSA 335
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ--DHTLF 139
IT T+G ++ + G G + + + L ++D G H+L
Sbjct: 336 AITCGGNLLTWGRGTYARLGHG-----NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLA 390
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G V++ G G G+ G G+ N P LV R+ ++ + +A+S +G +
Sbjct: 391 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL---PRVQRVFAGSQFSVALSSEGQL 447
Query: 200 FGWGNSEY--GQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + Q+ E +Q S PR++S + RIVDVA + C L+ G V+ WG
Sbjct: 448 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQH-KRIVDVAVSVAHCLALSSSGEVFGWGR 506
Query: 257 GLLGQGPKVSRSMKPTL 273
Q S S +P L
Sbjct: 507 NDSQQICPASVSSEPLL 523
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 31/191 (16%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L +G AH++ +T F +G+ +G+ G G + G + L ++
Sbjct: 381 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLP--RVQRVFA 433
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH------LNNQETPCLVRGEIEGERIVKLSSA 186
G ++ L+ G++Y+ WG T LGH + P LV ++ +RIV ++ +
Sbjct: 434 GSQFSVALSSEGQLYT--WGK--ATCLGHQLVERSVQGCSVPRLV-SSLQHKRIVDVAVS 488
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
V LA+S G+VFGWG ++ QI SE + TP ++S + + G AC
Sbjct: 489 VAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVS-------LPTFPASGIAC 541
Query: 243 TMLNDEGLVYS 253
T + + LV++
Sbjct: 542 T--SAQSLVWT 550
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 251 VYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
YSWG G LG G +R++ PT I + QH V+S+ G AIT G
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAV-PTKIAA--LEQH------CVQSVYCGCSYSAAITCGG 341
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+L WG+ Y +LG G +D+ P V
Sbjct: 342 NLLTWGRGTYARLGHGNSDDRSLPTLV 368
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4140
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4141 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGS 4199
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4200 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4258
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4259 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4310
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4311 NSEGQLGLG 4319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4010 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4064
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4065 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4123
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4124 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4180
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4181 IGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4231
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4232 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4280
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4234 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4288
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4289 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4343
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 44/335 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +A GY +++ + + ++ CG NS QLG + P PV
Sbjct: 122 VRAVAGGYQYSL----ALHADGTVWACGSNSAGQLGNGTTAAR-----------SAPRPV 166
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S + +A G +H + + + + +GNN +GQ G G + L+
Sbjct: 167 PGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATP-----VQVPGLQ 220
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ G H+L L G V++ G+ GQ G G + TP V G ++V +
Sbjct: 221 G--VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGL---SQVVSV 275
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIVDVASGGSAC 242
++ LA+ G V+ WGN+ +GQ+ E+ +ST R + +G+ +V VA G
Sbjct: 276 AAGGFHSLALCADGTVWAWGNNGFGQLGEA---VSTQRTKPGRVEGLREVVAVAGGFYHS 332
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ G ++SWG G LG G S S +P + V S+ AG
Sbjct: 333 LAVRAGGSLWSWGNNYSGQLGNG-SFSSSARPAPVQGL----------GAVTSVAAGGMH 381
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G ++ WG+N+ GQLG ++ P++V
Sbjct: 382 SVAVQADGTVWAWGRNEEGQLGHERAPERATPVRV 416
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 57 VRIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
V P PV P +Q+ +A G H++ + + + +GNN FGQ G + + G+
Sbjct: 258 VHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGR-- 315
Query: 116 CHNIADLEGEKIMDAVCGQ-DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+EG + + AV G H+L + G ++S G GQ G G ++ P V+G
Sbjct: 316 ------VEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGL 369
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
+ +++ +AV G V+ WG +E GQ+ E + +TP + G+ V
Sbjct: 370 ---GAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATP---VRVPGLQGEV 423
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ 261
VA+G + G +++WG GQ
Sbjct: 424 AVAAGFYHSLSVQAGGSLWAWGLNDFGQ 451
>gi|350580250|ref|XP_003480771.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 2 [Sus scrofa]
Length = 379
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 134/315 (42%), Gaps = 33/315 (10%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
A+++ LF G NS QLG P +L F + +K + G
Sbjct: 7 ASEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQL-SEFCK--------PGCVKRITGG 57
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H+ ++TD F G N GQ G G ED C + L G I CG D
Sbjct: 58 GGHSAIVTDQGSLFVCGLNKDGQLGLG--HTEDVLYFTLCKS---LLGCPIQQVACGWDF 112
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVS 194
T+ LT++G+V SCG + GQ G+ H + C+V E++ E++V +++ + LA +
Sbjct: 113 TIILTKNGQVLSCGSNSFGQLGVPHGPRR---CVVPQAIEVQREKVVSIAAGLRHALAAT 169
Query: 195 DKGDVFGWGNSEY--------GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
G VF WG GQ + P ++ + S+ V V +G L
Sbjct: 170 ASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTGLEN-SQAVCVLAGSGHSASLT 228
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
D G +Y WG GQ ++ +P + H+F KV ++ +G A T
Sbjct: 229 DAGELYVWGSNKHGQ---LASQAAFLPLPQKIEA-HRFQ-NEKVAAVWSGWTHLVAQTET 283
Query: 307 GHLYMWGKNQYGQLG 321
G ++ WG+ YGQLG
Sbjct: 284 GKVFTWGRADYGQLG 298
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ TK N ++ CG NS QLG H PR+ +P
Sbjct: 103 IQQVACGWDFTIILTK----NGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ ++ +A G H + T + F +G GR + + + +
Sbjct: 148 IEVQREKVVSIAAGLRHALAATASGLVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSKV 206
Query: 123 EGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
G + AVC G H+ LT++G++Y WG++ G L +Q + +IE
Sbjct: 207 TGLENSQAVCVLAGSGHSASLTDAGELYV--WGSNKH---GQLASQAAFLPLPQKIEAHR 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
E++ + S ++A ++ G VF WG ++YGQ+ +
Sbjct: 262 FQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGRT 300
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 537
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 54/343 (15%)
Query: 30 CGLNSDSQL---GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
C L D+QL G + + G P + F + K HL GR+ T+++T N
Sbjct: 112 CILTEDNQLFMWGTNSAGQMGLPQNQIFKFPTLSDMFKMIDIDQVHL--GRSFTLILTSN 169
Query: 87 E-------------GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
+ + G+N FGQ G G E +G + L ++++ G
Sbjct: 170 KLLNNSFNKSEEQGKLLSVGSNDFGQLGLG----EGMRGSSTPRVVEKLNNQELVSIGAG 225
Query: 134 QDHTLFLTESGKVYSCGWGADGQTG---------------LGHLNNQETP-------CLV 171
DH++ +T+SG + G+ +GQ G + + N TP LV
Sbjct: 226 FDHSMAVTKSGHTFGWGYNVEGQIGQRIVEYKRVESAGENVDSMENSMTPDAEYNIPTLV 285
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR 231
E+E ++ K+ DC VS +G+V+ GN+E G + + ++ ++ +
Sbjct: 286 P-EMESIKVAKVYCGYDCSFLVSARGNVYAMGNNETGTLGVGDDKLGRVTKPTKVAMPEK 344
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+ ++ G + L + G VYS G+ G LG G + PTLIP F ++
Sbjct: 345 VKQLSCGATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIP--FFHENGI---- 398
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+V + AG +T+ G +Y WG + G+LG + + P
Sbjct: 399 RVTQVSAGGAHSMVLTDEGQVYTWGCGENGKLGHNSETNSNIP 441
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLG-----YHDPRKKGNPLELVMSFV 57
++ I G+ ++ TKS FG G N + Q+G Y G ++ + + +
Sbjct: 218 ELVSIGAGFDHSMAVTKSGHT----FGWGYNVEGQIGQRIVEYKRVESAGENVDSMENSM 273
Query: 58 ------RIPLPV-KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
IP V + S ++ + G + +++ + GNN G G G +D
Sbjct: 274 TPDAEYNIPTLVPEMESIKVAKVYCGYDCSFLVSARGNVYAMGNNETGTLGVG----DDK 329
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPC 169
G+ + EK+ CG HTLFL ESG+VYSCGWG++G+ GLG + N+ P
Sbjct: 330 LGRVTKPTKVAMP-EKVKQLSCGATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPT 388
Query: 170 LVRGEIE-GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCK 227
L+ E G R+ ++S+ + ++D+G V+ WG E G++ SE + P+++
Sbjct: 389 LIPFFHENGIRVTQVSAGGAHSMVLTDEGQVYTWGCGENGKLGHNSETNSNIPQLVKSLA 448
Query: 228 GVSRIVDVASG 238
+ I+ +A+G
Sbjct: 449 KRNAIL-IAAG 458
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 24/199 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IK+ + CGY + + + + ++ G N LG D + L V ++ +
Sbjct: 291 IKVAKVYCGYDCSFLVSARGN----VYAMGNNETGTLGVGDDK-----LGRVTKPTKVAM 341
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW--FCHNI 119
P K +K L+ G HT+ + ++ ++ G S G+ G G Y F H
Sbjct: 342 PEK-----VKQLSCGATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHE- 395
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
G ++ G H++ LT+ G+VY+ G G +G+ G N P LV+ +
Sbjct: 396 ---NGIRVTQVSAGGAHSMVLTDEGQVYTWGCGENGKLGHNSETNSNIPQLVKSLAKRNA 452
Query: 180 IVKL----SSAVDCVLAVS 194
I+ +S V C +A +
Sbjct: 453 ILIAAGIDTSMVRCSIATT 471
>gi|351711822|gb|EHB14741.1| Protein RCC2, partial [Heterocephalus glaber]
Length = 427
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 65 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVLATCGRNHT 119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 120 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 178
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 291
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 292 SQIYAGYTCSF-AVSEVGGLFFWG 314
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 8 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 67
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI E ++ C
Sbjct: 68 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGLSH-----------EVIVLATCG 115
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 116 RNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 159
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 56 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVLA 112
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 113 TCGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 165
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 166 CGAEFSMIMDCKGNLYSFGCPEYGQLG 192
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 23/264 (8%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4146
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ +AVS G
Sbjct: 4147 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGS 4205
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4264
Query: 257 GLLGQGP--KVSRSMKPTLIP--STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
L P + +P +P S +F +E + G A+++ G +Y W
Sbjct: 4265 DRLIGLPEGRARNHNRPQQVPVLSGVF----------IEDIAVGAEHTLALSSTGDVYAW 4314
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAV 336
G N GQLGLG P + V
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLITV 4338
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +PV PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4016 VMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4070
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4071 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4129
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4130 LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4186
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4187 IGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIG------- 4239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P +V V
Sbjct: 4240 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPV 4286
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S GVS I
Sbjct: 662 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVS-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4240 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQVPVLSGVFIED 4294
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L+ +G VY+ G ++GQ GLGH N+ P L+ ++G+ I ++S+
Sbjct: 4295 IAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLI-TVLQGKNIRQISA 4349
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
K DV+ WG +GQ++E+ + P S+ V G + ++ G V + G
Sbjct: 3995 KCDVYLWGAGRHGQLAEAGRNVMVPVA---APSFSQAQQVVCGQNCTFVIQANGTVLACG 4051
Query: 256 ---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHL 309
YG LGQG S + + S L G V L+ + G A+T G +
Sbjct: 4052 EGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGEV 4102
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG YG+LG G + Q P ++
Sbjct: 4103 FSWGDGDYGKLGHGNSDRQRRPRQI 4127
>gi|383847394|ref|XP_003699339.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Megachile
rotundata]
Length = 522
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 18/218 (8%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I L G+ I G+DH L LT+ GKVYS G GQ G G + P LV+ E
Sbjct: 68 IEVLCGKNIKTLAVGRDHLLALTKQGKVYSWGCNDHGQLGNGCYLSSTEPALVKIIKNNE 127
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
IV ++ D +A++ G+V+ WGN Y + + PR + S++ VA
Sbjct: 128 HIVYIACGSDYSIALTKIGEVYSWGNIGYSE--------NVPRQVQIDGFDSKVTSVACA 179
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
M+ + G VYSWG Q S KP + + L G ++ ++ G
Sbjct: 180 KRFIIMITENGEVYSWGDNSSDQLRTRYYSNQSKPCKV-TALVG-------IVIKKVVCG 231
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+++ G LY+WGKN +GQLG + P+K+
Sbjct: 232 SSHVLALSSTGDLYVWGKNDWGQLGTDGRGNSAQPMKL 269
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 51/249 (20%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG------------IVQEEDYQGKWFC 116
IK LA GR H + +T +++G N GQ G G I++ ++ C
Sbjct: 75 NIKTLAVGRDHLLALTKQGKVYSWGCNDHGQLGNGCYLSSTEPALVKIIKNNEHIVYIAC 134
Query: 117 ---HNIA-----------------------DLEG--EKIMDAVCGQDHTLFLTESGKVYS 148
++IA ++G K+ C + + +TE+G+VYS
Sbjct: 135 GSDYSIALTKIGEVYSWGNIGYSENVPRQVQIDGFDSKVTSVACAKRFIIMITENGEVYS 194
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
G + Q + +NQ PC V + G I K+ VLA+S GD++ WG +++G
Sbjct: 195 WGDNSSDQLRTRYYSNQSKPCKVTALV-GIVIKKVVCGSSHVLALSSTGDLYVWGKNDWG 253
Query: 209 QI-SESEMQISTPRVLSQCKGVSRIVDVASGGS--ACTMLNDEGLVYSWGYGLLGQGPKV 265
Q+ ++ + P L K + ++D+A+ S + E V+ WG LGQ K
Sbjct: 254 QLGTDGRGNSAQPMKLISAK-MRTVLDIAASYSNDISIAITGEKNVFIWG-NCLGQCIK- 310
Query: 266 SRSMKPTLI 274
KPT I
Sbjct: 311 ----KPTYI 315
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+++ +A + I+IT+N +++G+NS Q ++ Y + + L G I
Sbjct: 171 SKVTSVACAKRFIIMITENGEVYSWGDNSSDQ-----LRTRYYSNQSKPCKVTALVGIVI 225
Query: 128 MDAVCGQDHTLFLTESGKVYSCG---WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
VCG H L L+ +G +Y G WG G G G N+ + L+ ++ + S
Sbjct: 226 KKVVCGSSHVLALSSTGDLYVWGKNDWGQLGTDGRG--NSAQPMKLISAKMRTVLDIAAS 283
Query: 185 SAVDCVLAVSDKGDVFGWGN 204
+ D +A++ + +VF WGN
Sbjct: 284 YSNDISIAITGEKNVFIWGN 303
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
Length = 453
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 91 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIDGLSHEVIVLAACGRNHT 145
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 146 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 204
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 205 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 264
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 265 DVACGANHTLILDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 317
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 318 SQIYAGYTCSF-AVSEVGGLFFWG 340
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ G+S IV
Sbjct: 82 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLID---GLSHEVIVLA 138
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 139 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 191
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 192 CGAEFSMIMDCKGNLYSFGCPEYGQLG 218
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 34 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 93
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI E ++ C
Sbjct: 94 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIDGLSH-----------EVIVLAACG 141
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 142 RNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 185
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP--LPVKHPSTQIKHLA--TGRAHTI 81
K++ CG ++ +LG V V +P LPV H +K +A +G H +
Sbjct: 3114 KVYACGEGTNGRLGLG-----------VTHNVPLPHQLPVLHQYV-VKKVAVHSGGKHAL 3161
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+T + F++G G+ G G D + L +KI D CG H+ ++
Sbjct: 3162 ALTLDGKVFSWGEGEDGKLGHGNRSTLDKP-----RLVEALRAKKIRDIACGSSHSAAIS 3216
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDV 199
G++Y+ G G G+ G G Q P LV + G R+++++ S LA+++ G V
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPKLV-AALSGRRVIQVACGSRDAQTLALTEDGAV 3275
Query: 200 FGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG--- 255
F WG+ ++G++ + STP + + G+ ++ + G L G V++WG
Sbjct: 3276 FSWGDGDFGKLGRGGSEGSSTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGKGD 3334
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
Y LG G KP I + L G +V + G A+T+ G +Y WG N
Sbjct: 3335 YYRLGHGGD-QHVRKPQPI-AGLRGH-------RVIHVAVGALHCLAVTDAGQVYAWGDN 3385
Query: 316 QYGQLGLG 323
+GQ G G
Sbjct: 3386 DHGQQGSG 3393
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 29/290 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP--LELVMSFVRI 59
+ + DIACG + T S + G +LG+ D + P +E ++ + I
Sbjct: 4353 MSVADIACGSAHSAAITASG----HVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAI 4408
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ +G A T+ ITD++ +++G+ +G+ GRG G + I
Sbjct: 4409 DIAC----------GSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----GSDGCKLPYKI 4453
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G ++ CG ++ LT+SG VY+ G G + G G + + P V ++G++
Sbjct: 4454 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKV-AALQGKK 4512
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASG 238
I+ +++ +A SD G+VF WG+++ GQ+ + + I PR+++ +G IV V G
Sbjct: 4513 IISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQG-KHIVKVTCG 4571
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGP---KVSRSMKPTLIPSTLFGQHQFN 285
+ L+ L S L P + R + P + + L H F+
Sbjct: 4572 SAHTLALSTSQL--SERLRPLPNPPLEYDLVRDLPPEALHARLILLHHFS 4619
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + + +G G+ G G D + K H L G + D CG
Sbjct: 4308 SGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMSVADIACGS 4362
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 4363 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL-GYRAIDIACGSGDAQTLC 4421
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ ++ V G L G V
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTKSGAV 4480
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+WG G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 4481 YTWGKGDFHRLGHG-SVEHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDAGE 4531
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ WG N GQLG GTV P VA
Sbjct: 4532 VFTWGDNDEGQLGDGTVTAIQRPRLVAA 4559
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI DIACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 3201 KIRDIACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNATQLKP-KLVAAL------ 3249
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG +G H I
Sbjct: 3250 ---SGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-----GSEGSSTPHEIE 3301
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 3302 RLSGIGVIQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPIAG-LRGH 3358
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3359 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3389
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++ GKVY+CG G +G+ GLG +N + P L + + + V + S
Sbjct: 3099 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVV---KKVAVHS 3155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I D+A G S
Sbjct: 3156 GGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRA-KKIRDIACGSSHSAA 3214
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ Q S+ +
Sbjct: 3215 ISSQGELYTWGLGEYGRLGHGDNATQ-LKPKLV-AALSGRRVIQVACGSRDAQTL----- 3267
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 3268 --ALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEI 3300
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 25/239 (10%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G+ +LG+ D + P + + S VR+ +K + G +++
Sbjct: 662 DSNFNAYSWGVGDSRRLGHGDCHARELPTK-IESLVRL----------VKSVYCGCSYSA 710
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ--DHTLF 139
IT +T+G ++G+ G G ++ + L+ +++D G HTL
Sbjct: 711 AITLGGNLYTWGRGTYGRLGHGTSDDQCLPAM-----VMALKDHQVVDVALGSGDAHTLC 765
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G V++ G G G+ G G N+ P L+ R+ ++ + LA+S +G +
Sbjct: 766 LTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL---PRVQRVFAGAQFSLALSCEGQL 822
Query: 200 FGWGNSEY--GQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
+ WG + Q+ E +Q S PR+++ + RIVDVA G + C L+ G ++ WG
Sbjct: 823 YSWGKASCLGHQLVERNVQGCSVPRLITGLQH-KRIVDVAVGVAHCLALSSSGEIFGWG 880
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 116/263 (44%), Gaps = 18/263 (6%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + + N A+++G + G G D + I L + CG ++
Sbjct: 657 HFLAVDSNFNAYSWGVGDSRRLGHG-----DCHARELPTKIESLV-RLVKSVYCGCSYSA 710
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDCVLAVSDKG 197
+T G +Y+ G G G+ G G ++Q P +V + + + V L S L ++ +G
Sbjct: 711 AITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEG 770
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
VF WG+ +YG++ S L C + R+ V +G L+ EG +YSWG
Sbjct: 771 LVFAWGDGDYGKLGNGSCNSSLLPQLIDC--LPRVQRVFAGAQFSLALSCEGQLYSWGKA 828
Query: 258 LLGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
V R+++ +P + G QH+ ++ + G A+++ G ++ WG+N
Sbjct: 829 SCLGHQLVERNVQGCSVPRLITGLQHK-----RIVDVAVGVAHCLALSSSGEIFGWGRND 883
Query: 317 YGQLGLGTVEDQPF---PLKVAV 336
Q+ +V +P P++V +
Sbjct: 884 NQQICPASVCSEPLLRQPIQVTL 906
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG-N 204
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 4218 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 4274
Query: 205 SEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
S + P +L + V + V V SGG C L +G VY+WG G LG
Sbjct: 4275 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLG 4334
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ N S V + G AIT GH+ WGK +YG+L
Sbjct: 4335 HGNRMSYD-RPKLV-------EHLNGMS-VADIACGSAHSAAITASGHVLTWGKGRYGRL 4385
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 4386 GHGDSEDQLRP 4396
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L +G AHT+ +T F +G+ +G+ G G C ++
Sbjct: 756 LGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL-------PRVQRVFA 808
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH------LNNQETPCLVRGEIEGERIVKLSSA 186
G +L L+ G++YS WG + LGH + P L+ G ++ +RIV ++
Sbjct: 809 GAQFSLALSCEGQLYS--WGK--ASCLGHQLVERNVQGCSVPRLITG-LQHKRIVDVAVG 863
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
V LA+S G++FGWG ++ QI + + + +L Q V+ + + + G ACT
Sbjct: 864 VAHCLALSSSGEIFGWGRNDNQQICPAS--VCSEPLLRQPIQVT-LPTLPASGIACT 917
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGW----GNSEYGQISESEMQIST-PRVLSQCKGVSRIV 233
++ +++ + D VL +S +G ++ W +E Q+ +E+ T + + C+G +
Sbjct: 601 QLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETFISIAAHCEG-RHFL 659
Query: 234 DVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
V S +A YSWG G LG G +R + PT I S + V
Sbjct: 660 AVDSNFNA----------YSWGVGDSRRLGHGDCHAREL-PTKIESLV---------RLV 699
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+S+ G AIT G+LY WG+ YG+LG GT +DQ P V
Sbjct: 700 KSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMV 743
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 151 WGADGQTGLGHLNNQETPC-LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
WG + + LG L + I R + ++ + VS G V+ G G+
Sbjct: 3066 WGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGR 3125
Query: 210 ISES-EMQISTPRVLSQC-KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
+ + P L + V + V V SGG L +G V+SWG G G+ +R
Sbjct: 3126 LGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR 3185
Query: 268 SM--KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
S KP L+ + K+ + G AI++ G LY WG +YG+LG G
Sbjct: 3186 STLDKPRLVEALR--------AKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3237
Query: 326 EDQPFP-LKVAVGGQK 340
Q P L A+ G++
Sbjct: 3238 ATQLKPKLVAALSGRR 3253
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 4205 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 4261
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 4262 VTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 4315
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 4316 LTTDGEVYAWGEGEDGKLGHG 4336
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC--LVRGEIEGERIVKL 183
++ C +D L L++ GK+Y+ W H+ E L EI E + +
Sbjct: 601 QLQQVACSEDVVLLLSKEGKLYN--W---------HIAKPEAEPQQLDFAEIANETFISI 649
Query: 184 SSAVD--CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV-DVASGGS 240
++ + LAV + + WG + ++ + + ++ + + R+V V G S
Sbjct: 650 AAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVRLVKSVYCGCS 707
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ G +Y+WG YG LG G + + P ++ + HQ + L +G
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCL-PAMVMA--LKDHQVVDVA----LGSGD 760
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T+ G ++ WG YG+LG G+ P
Sbjct: 761 AHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLP 794
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4350
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|74190775|dbj|BAE28179.1| unnamed protein product [Mus musculus]
Length = 370
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 130/315 (41%), Gaps = 33/315 (10%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
A+++ LF G NS QLG P +L F + + IK + G
Sbjct: 7 ASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQL-SDFCQ--------AGCIKSVTGG 57
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H+ V+TD F G N GQ G G E+ C L G I CG D
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLRGCPIRQVACGWDF 112
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVS 194
T+ LTE G+V SCG A GQ G+ H + C+V IE E++V +++ + LA +
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATT 169
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------LN 246
G VF WG + P L+ K SR+ + + + C + L
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLPLFLTA-KEPSRVTGLENSTAVCAVAGSDHSASLT 228
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
D G +Y WG GQ + + +P + + KV ++ +G A T
Sbjct: 229 DTGELYVWGRNKHGQ-----LASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTET 283
Query: 307 GHLYMWGKNQYGQLG 321
G ++ WG+ YGQLG
Sbjct: 284 GKVFTWGRADYGQLG 298
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ ++ CG N+ QLG H PRK +P
Sbjct: 103 IRQVACGWDFTIMLTEKG----QVLSCGSNAFGQLGVPHGPRK-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + T F +G GR + ++ + +
Sbjct: 148 IECLREKVVCVAAGLRHALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
LE + AV G DH+ LT++G++Y WG + G L ++ + IE
Sbjct: 207 TGLENSTAVCAVAGSDHSASLTDTGELYV--WGRNKH---GQLASRAVFLPLPQRIEAHY 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G VF WG ++YGQ+
Sbjct: 262 FQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQL 297
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 133 AHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAP-----KLIEGLGEEVIVAAACGRNHT 187
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSD 195
L LTE+G VY+ G GQ G G NQ L I+ G+ IVK++ + + V
Sbjct: 188 LALTENGTVYTFGENKLGQLGQG---NQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDC 244
Query: 196 KGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV------------------- 233
KG+++ +G EYGQ+ S+ + R+ C+ + R V
Sbjct: 245 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVV 304
Query: 234 --DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
DVA G + +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 305 ARDVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDFPGRGATQ 361
Query: 292 SLIAGPCTFGAITNFGHLYMWG 313
C+F A++ G L+ WG
Sbjct: 362 IYCGYQCSF-ALSEMGGLFFWG 382
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG ++ GQ+ + + L + G IV A G + L + G
Sbjct: 136 LIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGT 195
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF- 306
VY++G G LGQG + + P I Q+N + V+ +A F I +
Sbjct: 196 VYTFGENKLGQLGQGNQTDAVLSPATI--------QYNGQPIVK--VACGAEFSMIVDCK 245
Query: 307 GHLYMWGKNQYGQLG 321
G+LY +G +YGQLG
Sbjct: 246 GNLYSFGCPEYGQLG 260
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3005 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3052
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3053 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3104
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3105 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3163
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3164 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3222
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3223 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 3273
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3303
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3093 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3142
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3143 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3195
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3196 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3254
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3255 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3312
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H L L+ G+VYS G DG+ G G+ + + P ++ + G +V +++
Sbjct: 3989 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSAC 4047
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDE 248
V+ GD++ WG YG++ S+SE Q+ P+++ +G R+VD+A G G A T+ L D+
Sbjct: 4048 VTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HRVVDIACGSGDAQTLCLTDD 4105
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+SWG YG LG+G S K + +L G KVE G A+T
Sbjct: 4106 DTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV----KVE---CGSQFSVALTK 4156
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y WGK Y +LG G+ + P +V
Sbjct: 4157 SGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4185
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4035
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4036 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4094
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4095 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4153
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4154 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4204
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4205 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4244
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2990 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3048
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3049 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3107
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3108 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3159
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3160 -ALTDEGLVFSWGDGDFGKLGRGGSE 3184
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4033 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4083
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4084 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4135
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4136 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4194
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4195 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4251
Query: 240 SACTM 244
SA T+
Sbjct: 4252 SAHTL 4256
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 217 ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPT 272
+STP +L + V + V V SGG C L+ EG VYSWG G LG G + S +P
Sbjct: 3967 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR-SPCDRPR 4025
Query: 273 LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+I S L G +V + AG +T G LY WGK +YG+LG EDQ P
Sbjct: 4026 VIES-LRG-------IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP 4076
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4147 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4201
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4202 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4259
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3251 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3305
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3306 RVACGSSHSVAWT 3318
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 37/256 (14%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+GN GQ G G+ + ++ + CH + G + + CG H++FL G VY+CG
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPR-NCHVFS---GRGLKEVGCGGQHSVFLMHDGSVYTCGS 59
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-- 209
+ GQ LGH +P +V G ++ ++I +S +AV+++G +F WG + GQ
Sbjct: 60 NSCGQ--LGHDKAGISPEVV-GALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLG 116
Query: 210 ISESEMQISTPRVLSQ-CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-----LGQGP 263
+ +E + PR++ + C RI V G C L+ +G +++WG LG+G
Sbjct: 117 LGTTETTVRIPRLVKRLCD--HRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGE 174
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG-----AITNFGHLYMWGKNQYG 318
PS LF +P + + T G A++ G ++ WGKN+ G
Sbjct: 175 -----------PSKLFP----HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAG 219
Query: 319 QLGLGTVEDQPFPLKV 334
QLGL +D+ P +
Sbjct: 220 QLGLNDKQDRAVPCHI 235
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 43/325 (13%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG NS QLG HD K G E+V + + +I ++ GR H++ + +
Sbjct: 54 VYTCGSNSCGQLG-HD--KAGISPEVVGAL---------DTQKITMVSCGRGHSMAVNEQ 101
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F +G GQ G G E + + D +I +CG H + L+ G++
Sbjct: 102 GQLFAWGAGDGGQLGLGTT-ETTVRIPRLVKRLCD---HRISQVMCGNQHCVALSRDGQL 157
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
++ G GQ GLG + + G + ++++ D A+S G VFGWG +
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNR 217
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG- 262
GQ+ ++ Q + ++V ++ G L +G ++++G +G LG G
Sbjct: 218 AGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGS 277
Query: 263 ------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
P+ + T + G+H T + + G +Y +G N
Sbjct: 278 TNSELLPRRVLELMGTEVSQIACGRHH---------------TLAFVPSSGVVYAFGCNS 322
Query: 317 YGQLGLGTVED--QPFPLKVAVGGQ 339
+GQLG G + D PFP+K +V +
Sbjct: 323 HGQLGTGILGDARSPFPVKTSVPSE 347
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 30/274 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIADLEGEK 126
+K + G H++ + + +T G+NS GQ G GI E + L+ +K
Sbjct: 35 LKEVGCGGQHSVFLMHDGSVYTCGSNSCGQLGHDKAGISPEV----------VGALDTQK 84
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSS 185
I CG+ H++ + E G++++ G G GQ GLG P LV+ + RI ++
Sbjct: 85 ITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVK-RLCDHRISQVMC 143
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSACT 243
+A+S G +F WG + GQ+ + + S P L G+ + + +GG
Sbjct: 144 GNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIP-LAQITAGGDHSF 202
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L+ G V+ WG G LG K R+ +P + +F KV + G
Sbjct: 203 ALSLSGAVFGWGKNRAGQLGLNDKQDRA-----VPCHI----KFLRSQKVVYISCGDEHT 253
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G L+ +G +GQLG G+ + P +V
Sbjct: 254 AALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRV 287
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + + P + F+R S ++ +++ G HT +T +
Sbjct: 210 VFGWGKNRAGQLGLNDKQDRAVPCHI--KFLR--------SQKVVYISCGDEHTAALTKD 259
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG+ S+GQ G G E + +L G ++ CG+ HTL F+ SG
Sbjct: 260 GGLFTFGDGSWGQLGHGSTNSE-----LLPRRVLELMGTEVSQIACGRHHTLAFVPSSGV 314
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE--RIVKLSSAVDCV 190
VY+ G + GQ G G L + +P V+ + E R++ + ++ +
Sbjct: 315 VYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINIGKSLSPI 361
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I+ + CG V ++ +LF G N+ QLG KG P +L P P
Sbjct: 137 RISQVMCGNQHCVALSRDG----QLFTWGQNTSGQLGL----GKGEPSKL------FPHP 182
Query: 63 VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K + + + G H+ ++ + F +G N GQ G Q+ CH I
Sbjct: 183 LKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP----CH-IKF 237
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +K++ CG +HT LT+ G +++ G G+ GQ G G N++ P V E+ G +
Sbjct: 238 LRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-ELMGTEVS 296
Query: 182 KLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ LA V G V+ +G + +GQ+
Sbjct: 297 QIACGRHHTLAFVPSSGVVYAFGCNSHGQL 326
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG 98
GY+D + G+ +++V PLP T + LA+G H++ + + + +G N+ G
Sbjct: 518 GYNDSGQLGDTVDMVR-VTPAPLPGL---TGVTALASGTYHSLALKQDGTVWAWGLNNLG 573
Query: 99 QCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKVYSCGWGADGQT 157
Q G G Q + G + A+ H+L L + G V++ G+ + GQ
Sbjct: 574 QLGDGTTVSRTEQ--------MPVPGLTDVTALAASTYHSLALKQDGTVWTWGYNSSGQL 625
Query: 158 GLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
G G ++ TP V G + G + +++ + LA+ G V+ WG + GQ+ +
Sbjct: 626 GDGTTASRLTPAQVPG-LTG--VSAIAAGLVHSLALKQDGTVWAWGRNTDGQLGNGAA-V 681
Query: 218 STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIP 275
++P V Q +G++ + +A+G L +G +SWG GQ ++ S+ P
Sbjct: 682 NSP-VPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTPV--- 737
Query: 276 STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
Q + V +L G A+ G ++ WG N G+LG GT D+ P++V
Sbjct: 738 -------QVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRV 789
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 24/269 (8%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G AH++V+ + A +G+N +GQ G G + G + L G +
Sbjct: 442 RVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGP---VQVQGLTGATAL 498
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A HTL L + G V+ G+ GQ G + TP + G + G + L+S
Sbjct: 499 SATA--YHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLPG-LTG--VTALASGTY 553
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
LA+ G V+ WG + GQ+ + T ++ G++ + +A+ L +
Sbjct: 554 HSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQM--PVPGLTDVTALAASTYHSLALKQD 611
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V++WGY G LG G SR + P +P + V ++ AG A+
Sbjct: 612 GTVWTWGYNSSGQLGDGTTASR-LTPAQVPG----------LTGVSAIAAGLVHSLALKQ 660
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG+N GQLG G + P P++V
Sbjct: 661 DGTVWAWGRNTDGQLGNGAAVNSPVPVQV 689
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ ++ IA G +V + + ++ ++ G N+D QLG + V P
Sbjct: 642 LTGVSAIAAG----LVHSLALKQDGTVWAWGRNTDGQLGNG-------------AAVNSP 684
Query: 61 LPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+PV+ T + +A G H++ + + A+++G N GQ G E G
Sbjct: 685 VPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLG-----NETITGS---LTP 736
Query: 120 ADLEGEKIMDAVCGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
++G + A+ G D H++ L G V++ G+ A+G+ G G ++ P V+G +
Sbjct: 737 VQVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQGLV 793
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 45/312 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CG NS +LG+ D + SF RI + +I + G HT+V+T
Sbjct: 563 EVWSCGQNSYGELGHGDTASRK-------SFERIQALQQK---EIIQIGAGNEHTVVLTA 612
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL----EGEKIMDAVCGQDHTLFLT 141
+ FT G N GQCG+G G +++++ G A G +HT+ ++
Sbjct: 613 DGKVFTCGYNDNGQCGQG--------GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVS 664
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA--VDCVLAVSDKG-- 197
G+V +CG+ GQ G G+ ++ P ++R +E +IV+L S VLA D
Sbjct: 665 TDGRVATCGYNYRGQLGHGNTTSESVPKIIRS-LEN-KIVRLVSCSYYHTVLACEDGNLQ 722
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQ-CKGVS--RIVDVASGGSACTMLNDEGLVYSW 254
+++ +G ++YGQ+ ++ S R + Q + +S +IV VA G ++ G +++
Sbjct: 723 NLYTFGRNDYGQLGHND---SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAF 779
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G YG LG +M+ L P + G + + + + G A+ + HL+
Sbjct: 780 GKNDYGQLGID-----TMENQLAPVQVRGGLE---RQECLEIRCGYYHTIALCSGAHLFA 831
Query: 312 WGKNQYGQLGLG 323
+G+N YGQLGLG
Sbjct: 832 FGRNDYGQLGLG 843
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 37/262 (14%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT-GRAHTIVIT 84
++ CG N QLG+ + + +P ++ +I L + HT++
Sbjct: 668 RVATCGYNYRGQLGHGNTTSES-----------VPKIIRSLENKIVRLVSCSYYHTVLAC 716
Query: 85 DN---EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++ + +TFG N +GQ G D + + L ++I+ CGQ HT+ +T
Sbjct: 717 EDGNLQNLYTFGRNDYGQLGHN-----DSIDRKIPQFVEALSDQQIVSVACGQYHTMVVT 771
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
SGK ++ G GQ G+ + NQ P VRG +E + +++ +A+ +F
Sbjct: 772 ASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFA 831
Query: 202 WGNSEYGQI--------SESEMQI-----STPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+G ++YGQ+ S S +Q+ S R++ + +G IV +A G ++D
Sbjct: 832 FGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEG-KDIVRIACGCYHTIAVSDN 890
Query: 249 GLVYSWG---YGLLGQGPKVSR 267
G++Y +G +G LG G R
Sbjct: 891 GVMYVFGRNNHGQLGTGDTTER 912
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 39/278 (14%)
Query: 80 TIVITDNEG---AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
T + ++EG ++ G NS+G+ G G D + I L+ ++I+ G +H
Sbjct: 552 TTIFHEDEGEREVWSCGQNSYGELGHG-----DTASRKSFERIQALQQKEIIQIGAGNEH 606
Query: 137 TLFLTESGKVYSCGWGADGQTGLG------HLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
T+ LT GKV++CG+ +GQ G G HL+ E P + G + + +
Sbjct: 607 TVVLTADGKVFTCGYNDNGQCGQGGTARVSHLS--EIPKMDSGSSQAHAY----NGCEHT 660
Query: 191 LAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML--ND 247
+ VS G V G + GQ+ + S P+++ + ++IV + S T+L D
Sbjct: 661 ILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACED 718
Query: 248 EGL--VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +Y++G YG LG + R + P + + ++ S+ G
Sbjct: 719 GNLQNLYTFGRNDYGQLGHNDSIDRKI-PQFVEAL--------SDQQIVSVACGQYHTMV 769
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+T G + +GKN YGQLG+ T+E+Q P++V G ++
Sbjct: 770 VTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLER 807
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 145/352 (41%), Gaps = 37/352 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I I G TVV T K+F CG N + Q G + + E+ P
Sbjct: 596 EIIQIGAGNEHTVVLTADG----KVFTCGYNDNGQCGQGGTARVSHLSEI---------P 642
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ H G HTI+++ + T G N GQ G G E I L
Sbjct: 643 KMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKI-----IRSL 697
Query: 123 EGEKIMDAVCGQDHTLFLTESGKV---YSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
E + + C HT+ E G + Y+ G GQ G +++ P V + ++
Sbjct: 698 ENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEA-LSDQQ 756
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSR--IVDV 235
IV ++ + V+ G F +G ++YGQ I E Q++ +V G+ R +++
Sbjct: 757 IVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRG---GLERQECLEI 813
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G L ++++G YG LG G + S + F + + + +
Sbjct: 814 RCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKD 873
Query: 293 LIAGPC---TFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLKVAVGGQ 339
++ C A+++ G +Y++G+N +GQLG G ++ PFP+ VG +
Sbjct: 874 IVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR 925
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I +ACG T+V T S K F G N QLG + P+++ R
Sbjct: 756 QIVSVACGQYHTMVVTASG----KAFAFGKNDYGQLGIDTMENQLAPVQVRGGLER---- 807
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI----------VQEEDYQG 112
+ + G HTI + F FG N +GQ G G +Q++ +
Sbjct: 808 -----QECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSN 862
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
I +LEG+ I+ CG HT+ ++++G +Y G GQ G G + P +
Sbjct: 863 ARL---IDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPI- 918
Query: 173 GEIEGERIVKLSS 185
+ G+R+ +++
Sbjct: 919 DDFVGKRVALVAA 931
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 53/138 (38%), Gaps = 11/138 (7%)
Query: 6 DIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY--HDPRKKGNPLELVMSFVRIPLPV 63
+I CGY T+ LF G N QLG + N F L
Sbjct: 812 EIRCGYYHTIALCSGA----HLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLID 867
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ I +A G HTI ++DN + FG N+ GQ G G E Y I D
Sbjct: 868 ELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP-----FPIDDFV 922
Query: 124 GEKIMDAVCGQDHTLFLT 141
G+++ G HT+ LT
Sbjct: 923 GKRVALVAAGFYHTVVLT 940
>gi|71020563|ref|XP_760512.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
gi|46100407|gb|EAK85640.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
Length = 548
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 53/313 (16%)
Query: 45 KKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA-------HTIVITDNEGAFTFGNNSF 97
K G PL + +P P H + ++ R H ++++ + A+ G N
Sbjct: 29 KSGPPLTVNPDHPDLPAP--HILRSVSNVRMKRVFSSHSSCHAVLLSVDGNAYIIGRNEQ 86
Query: 98 GQCG---RGIVQEEDYQGK--W----------FCHNIADLEGEKIMDAVCGQDHTLFLTE 142
GQCG R I G W F + +I+ A CG+ HTL LT
Sbjct: 87 GQCGLPIRPIPASSKPSGPAVWDAYLLDHATDFSPALPTGANGQIVYAACGRSHTLLLTA 146
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-----EGERIVKLSSAVDCVLAVSDKG 197
SG VYS G GQ GH +Q P R E E + IV S + + ++ G
Sbjct: 147 SGSVYSAGLNTSGQ--CGHPESQTVPIFTRIETAPFIKERDAIVAASCGLTFSMLLTQSG 204
Query: 198 DVFGWGNSEYGQI----------SESEMQIST---PRVLSQCKGVSRIVDVASGGSACTM 244
V+ G+SE GQ+ S + + +T P ++ Q +IV +A G
Sbjct: 205 KVYTMGSSEKGQLGNGRTGEHFTSSNRLAFNTFSEPFLVKQLAD-KKIVHIACGQQHTIA 263
Query: 245 LNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L+D+G VY W GYG LG G + + + PTL+P F + N + +++ AGP
Sbjct: 264 LDDQGFVYVWGFGGYGRLGLGSQQDQ-LVPTLVPQ--FARE--NVVMRAKAIYAGPTNSA 318
Query: 302 AITNFGHLYMWGK 314
+ ++ GK
Sbjct: 319 VVDGQSMFWLAGK 331
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL- 61
+I ACG T++ T S ++ GLN+ Q G+ P + P+ F RI
Sbjct: 130 QIVYAACGRSHTLLLTASG----SVYSAGLNTSGQCGH--PESQTVPI-----FTRIETA 178
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--- 118
P I + G ++++T + +T G++ GQ G G E N
Sbjct: 179 PFIKERDAIVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHFTSSNRLAFNTFS 238
Query: 119 ----IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+ L +KI+ CGQ HT+ L + G VY G+G G+ GLG +Q P LV +
Sbjct: 239 EPFLVKQLADKKIVHIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQDQLVPTLVP-Q 297
Query: 175 IEGERIVKLSSAV 187
E +V + A+
Sbjct: 298 FARENVVMRAKAI 310
>gi|383865068|ref|XP_003707997.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Megachile rotundata]
Length = 469
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 135/325 (41%), Gaps = 45/325 (13%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
FGC N + LG D K G+ E P PV P ++ + G +H+ + ++
Sbjct: 137 FGC--NDEGALG-RDTSKDGSETE--------PGPVDLPGKAVQ-VTAGDSHSAALLEDG 184
Query: 88 GAFTFGN--NSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G+ +S G G + E + I L KI+ G DH + L E+G
Sbjct: 185 RVFAWGSFRDSHGSMGLTLKGNERFP-------IEILPNVKIVKIASGADHLVLLNENGH 237
Query: 146 VYSCGWGADGQTG--LGHLNNQET-----PCLVRGEIEGERIVKLS-----SAVDCVLAV 193
VY+CG G GQ G ++ T P L+ +E + KL + C A
Sbjct: 238 VYTCGCGEQGQLGRVAARAASRNTRHGIGPLLIPALVEFKVTKKLEFTDIWAGSYCTFAK 297
Query: 194 S-DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
KGD++ +G + Y QI + +S+ ++SG L+D G V+
Sbjct: 298 EYQKGDIYAFGLNNYYQIGLKDPVTQFHPQISKTFSGKVWKHISSGQHHTIALDDSGQVF 357
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
G YG LG GP S + + TL+P+ K + AG A+T G L
Sbjct: 358 VMGRKEYGRLGLGPNCSDAKELTLVPAL--------SSFKCVDVAAGSAQSFAVTESGDL 409
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
Y WG GQLG G ED P+ V
Sbjct: 410 YSWGMGSNGQLGTGEEEDVEEPVLV 434
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 20/195 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++ TDI G T K ++ GLN+ Q+G DP + +P ++ +F
Sbjct: 282 LEFTDIWAGSYCTFAKEYQKGD---IYAFGLNNYYQIGLKDPVTQFHP-QISKTF----- 332
Query: 62 PVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
S ++ KH+++G+ HTI + D+ F G +G+ G G + + +
Sbjct: 333 -----SGKVWKHISSGQHHTIALDDSGQVFVMGRKEYGRLGLGPNCSDAKE----LTLVP 383
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGER 179
L K +D G + +TESG +YS G G++GQ G G + E P LV+G ++EG+
Sbjct: 384 ALSSFKCVDVAAGSAQSFAVTESGDLYSWGMGSNGQLGTGEEEDVEEPVLVKGKQLEGKT 443
Query: 180 IVKLSSAVDCVLAVS 194
IV+++ LA++
Sbjct: 444 IVRVAGGGQHTLALA 458
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 493 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 547
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 548 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 606
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 607 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 665
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 666 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 703
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3017 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3064
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3065 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3116
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3117 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3175
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3176 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3234
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3235 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3285
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3315
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3105 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3154
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3155 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3207
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3208 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3266
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3267 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3324
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4098
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4099 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4157
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4158 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4216
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4217 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4267
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4268 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4307
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3002 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3060
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3061 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3119
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3120 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3171
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3172 -ALTDEGLVFSWGDGDFGKLGRGGSE 3196
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4096 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4146
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4147 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4198
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4199 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4257
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4258 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4314
Query: 240 SACTM 244
SA T+
Sbjct: 4315 SAHTL 4319
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3960 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4013
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4072
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4131
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4132 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4185 GGSDGCKVPMKI 4196
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 567
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 568 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 616
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 617 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 646
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3948 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4002
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4063 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4113
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4114 AGDLYTWGKGRYGRLGHSDSEDQLKP 4139
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 391 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 436
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 496
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 549
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 550 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 586
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 441 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 495
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 544
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4264
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4322
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3263 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3317
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3318 RVACGSSHSVAWT 3330
>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
Length = 522
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVLAACGRNHT 214
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 273
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 333
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 334 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 386
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 387 SQIYAGYTCSF-AVSEVGGLFFWG 409
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVLA 207
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 208 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 260
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 261 CGAEFSMIMDCKGNLYSFGCPEYGQLG 287
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI E ++ C
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGLSH-----------EVIVLAACG 210
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 211 RNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 254
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 30/306 (9%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K + CG S+ +LG R +P ++ +H ++ + GR H + +T
Sbjct: 2751 KAYACGEGSNGRLGLGHSRNVNSPHQITAL-------SQHVVRKVAVHSGGR-HALALTA 2802
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F++G G+ G G V D I L G ++ D G +H+ +T SG+
Sbjct: 2803 DGRVFSWGEGDDGKLGHGDVTSLDTP-----RCIEALNGFRVRDVAAGSNHSAAVTSSGE 2857
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWG 203
+Y+ G G G+ G G Q TP V + G+R+V++S S LA+ + G V+ WG
Sbjct: 2858 LYTWGLGEYGRLGHGDNLTQLTPKRVESLV-GQRVVQVSCGSRDAQTLALVEGGLVYSWG 2916
Query: 204 NSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+ ++G++ + S+P ++ + G+ + V G L G VY+WG Y L
Sbjct: 2917 DGDFGKLGRGGSEGCSSPCLVDKLSGLG-VCHVECGAQFSVALTCNGHVYTWGKGDYFRL 2975
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G PTL+ L G+ KV + G A+T+ G ++ WG N +GQ
Sbjct: 2976 GHGSD-QHVRWPTLVEG-LRGK-------KVIGVSVGALHCLAVTDAGQVFAWGDNDHGQ 3026
Query: 320 LGLGTV 325
G G++
Sbjct: 3027 QGNGSI 3032
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 130 AVCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-ERIVKLSSAV 187
+V G +LFL T+SGK Y+CG G++G+ GLGH N +P + + R V + S
Sbjct: 2735 SVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGG 2794
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA++ G VF WG + G++ ++ + TPR + G R+ DVA+G + +
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGF-RVRDVAAGSNHSAAVT 2853
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTFG 301
G +Y+WG YG LG G +++ + P + S L GQ Q + S+ +
Sbjct: 2854 SSGELYTWGLGEYGRLGHGDNLTQ-LTPKRVES-LVGQRVVQVSCGSRDAQTL------- 2904
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVE 326
A+ G +Y WG +G+LG G E
Sbjct: 2905 ALVEGGLVYSWGDGDFGKLGRGGSE 2929
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 118/272 (43%), Gaps = 30/272 (11%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAV 131
+G H + ++ +++G G+ G G K C I L G+ ++D
Sbjct: 3708 SGGKHCLALSSEGEVYSWGEGEDGKLGHG--------NKLPCDRPRIIESLRGKDVVDVA 3759
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS----SAV 187
CG H+ +T G++Y+ G G G+ G G ++Q P LV + G R++ ++ A
Sbjct: 3760 CGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALL-GYRVMDVACGSGDAQ 3818
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C + + G V+ WG+ +YG++ P + G+ I+ V G L+
Sbjct: 3819 TCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLG-IIKVECGSQFSVALS 3877
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+ G VY+WG Y LG G V ++ TL G+ KV S+ G
Sbjct: 3878 NNGSVYTWGKGDYHRLGHG--VDEHVRRPKKVMTLQGK-------KVISISTGALHCVVC 3928
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
T+ G +Y WG N GQLG GT P VA
Sbjct: 3929 TDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVA 3960
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAV 187
+ G + TLF +T G+VY+ G+GA G+ G+G + P L+ + +++ S
Sbjct: 3652 LAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGK 3711
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C LA+S +G+V+ WG E G++ +++ PR++ +G +VDVA GG+ +
Sbjct: 3712 HC-LALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRG-KDVVDVACGGAHSAAIT 3769
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
G +Y+WG YG LG G +KP L+ L G + +G AI
Sbjct: 3770 ALGELYTWGKGRYGRLGHGDS-DDQLKPKLV-EALLGYRVMDVACG-----SGDAQTCAI 3822
Query: 304 TNF--GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T+ G ++ WG YG+LG G + P K+
Sbjct: 3823 TDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKI 3855
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 28/244 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++ D+A G + T S + L+ GL +LG+ D + P R+
Sbjct: 2837 FRVRDVAAGSNHSAAVTSSGE----LYTWGLGEYGRLGHGDNLTQLTP-------KRVES 2885
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN--- 118
V Q+ + A T+ + + +++G+ FG+ GRG G C +
Sbjct: 2886 LVGQRVVQVS-CGSRDAQTLALVEGGLVYSWGDGDFGKLGRG--------GSEGCSSPCL 2936
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIE 176
+ L G + CG ++ LT +G VY+ WG LGH ++Q P LV G +
Sbjct: 2937 VDKLSGLGVCHVECGAQFSVALTCNGHVYT--WGKGDYFRLGHGSDQHVRWPTLVEG-LR 2993
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G++++ +S LAV+D G VF WG++++GQ + ++ L Q +I VA
Sbjct: 2994 GKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVA 3053
Query: 237 SGGS 240
G S
Sbjct: 3054 CGSS 3057
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G++Y GWG + + LG + + E + R ++L+ + A++ G V+
Sbjct: 3614 GQIY--GWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYAT 3671
Query: 203 GNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG--- 257
G G++ + ++ P +L + V + V V SGG C L+ EG VYSWG G
Sbjct: 3672 GYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDG 3731
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G K+ +P +I S L G+ V + G AIT G LY WGK +Y
Sbjct: 3732 KLGHGNKLPCD-RPRIIES-LRGK-------DVVDVACGGAHSAAITALGELYTWGKGRY 3782
Query: 318 GQLGLGTVEDQPFP 331
G+LG G +DQ P
Sbjct: 3783 GRLGHGDSDDQLKP 3796
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 41/280 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ D+ACG + T + L+ G +LG+ D + P +LV + +
Sbjct: 3755 VVDVACGGAHSAAITALGE----LYTWGKGRYGRLGHGDSDDQLKP-KLVEALL------ 3803
Query: 64 KHPSTQIKHLA--TGRAHTIVITDNEG--AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
++ +A +G A T ITD EG +++G+ +G+ GRG G I
Sbjct: 3804 ---GYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRG-----GSDGCKIPTKI 3855
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L G I+ CG ++ L+ +G VY+ G G + G G + P V ++G++
Sbjct: 3856 ESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVM-TLQGKK 3914
Query: 180 IVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLS--QCKGVSRIVDV 235
++ +S+ A+ CV+ +D+G+V+ WG+++ GQ+ + + I PR+++ Q K ++R+
Sbjct: 3915 VISISTGALHCVVC-TDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRV--- 3970
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP 275
S GSA T+ +W P S PT IP
Sbjct: 3971 -SCGSAHTV--------AWSTCKGCSTPVAGSSRLPTSIP 4001
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 30/250 (12%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT---GRAHTIVITD 85
CG NS QLG +KG P R P + P+ + ++A G+ H++ +
Sbjct: 46 SCGDNSRGQLG-----RKGTP--------RGEQPERIPALETLNVALVSCGKEHSLAVCH 92
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G S GQ G G +E + K I L G KI+ CG H++ L+E G+
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPK----KIKTLAGIKIIQVACGHYHSVALSEDGQ 148
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FGWG+
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207
Query: 205 SEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
+ GQ++ S +Q P + K + +V ++ G +L +G V+++G YG
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVFTFGDNSYG 266
Query: 258 LLGQGPKVSR 267
LG P +
Sbjct: 267 QLGHDPTAEK 276
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 37/263 (14%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
A+G H++++ + + G+NS GQ GR G + E + I LE + C
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE------RIPALETLNVALVSC 82
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCV 190
G++H+L + G+V++ G ++GQ G+G +ET + + + G +I++++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEF--KETTFIPKKIKTLAGIKIIQVACGHYHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+A+S+ G VF WG + +GQ+ E Q S RV S +G+ + VA+GG L+
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGHHSFALSL 198
Query: 248 EGLVYSWG------YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
G + WG L G V R KP I + K +++ C +
Sbjct: 199 SGTSFGWGSNSAGQLALSGNNAPVQR-YKPVSIGAL-----------KTLGVVSISCGYK 246
Query: 301 --GAITNFGHLYMWGKNQYGQLG 321
+T G ++ +G N YGQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L G V SCG + GQ G E P + +E + +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPA-LETLNVALV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG + GQ+ E + +T P+ + G+ +I+ VA G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG +G LG G + P + S + P ++V + G
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL-----EGIPLAQVAA--GGHH 192
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
+F A++ G + WG N GQL L
Sbjct: 193 SF-ALSLSGTSFGWGSNSAGQLALS 216
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG+ +V ++ ++F G NS QLG + V S IPL
Sbjct: 128 IKIIQVACGHYHSVALSEDG----QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCH 117
+A G H+ ++ + +F +G+NS GQ VQ ++
Sbjct: 184 A---------QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQ------RYKPV 228
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+I L+ ++ CG HT LT+ GKV++ G + GQ G + P LV
Sbjct: 229 SIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV------ 282
Query: 178 ERIVKLSSAVDC 189
ERI L S +DC
Sbjct: 283 ERIEGLVSQIDC 294
>gi|241121413|ref|XP_002403206.1| regulator of chromosome condensation, putative [Ixodes scapularis]
gi|215493385|gb|EEC03026.1| regulator of chromosome condensation, putative [Ixodes scapularis]
Length = 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 12/191 (6%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
AF+FG+N +GQ G G ++ + C I L+ +++ CG+ HTL T+ KVY
Sbjct: 27 AFSFGSNGYGQLGLG---HKNPVTRPKC--IKGLKDHRVVLVACGRAHTLVATDDLKVYG 81
Query: 149 CGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G + Q GL Q T P L+R + G +I +L++ + +A++DKG F WG +
Sbjct: 82 FGMNTEHQLGLDSQEFQHTEPALIR-SLTGLQIKQLAAGAEHSIALTDKGVAFVWGCGKE 140
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPK 264
GQ+ + S P L + K RI+ V++G +++ EG VY++G G LG G K
Sbjct: 141 GQLGLG-TRPSVPEPL-ELKVDIRIMSVSAGYYHTAIVSAEGKVYAFGDGRNGQLGLGNK 198
Query: 265 VSRSMKPTLIP 275
++S KP IP
Sbjct: 199 TTQSSKPQPIP 209
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG T+VAT +LK++G G+N++ QLG + L+ S +
Sbjct: 59 RVVLVACGRAHTLVATD----DLKVYGFGMNTEHQLGLDSQEFQHTEPALIRSLTGL--- 111
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
QIK LA G H+I +TD AF +G GQ G G + +L
Sbjct: 112 ------QIKQLAAGAEHSIALTDKGVAFVWGCGKEGQLGLGT--------RPSVPEPLEL 157
Query: 123 EGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
+ + +IM G HT ++ GKVY+ G G +GQ GLG+ Q +
Sbjct: 158 KVDIRIMSVSAGYYHTAIVSAEGKVYAFGDGRNGQLGLGNKTTQSS 203
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 128 MDAVCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
M ++ G Q T +TE G+ +S G GQ GLGH N P ++G ++ R+V ++
Sbjct: 8 MASISGKVQQKTRQITE-GRAFSFGSNGYGQLGLGHKNPVTRPKCIKG-LKDHRVVLVAC 65
Query: 186 AVDCVLAVSDKGDVFGWG-NSEYGQ-ISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
L +D V+G+G N+E+ + E Q + P ++ G+ +I +A+G
Sbjct: 66 GRAHTLVATDDLKVYGFGMNTEHQLGLDSQEFQHTEPALIRSLTGL-QIKQLAAGAEHSI 124
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
L D+G+ + WG G GQ + +P+ +P L + ++ S+ AG +
Sbjct: 125 ALTDKGVAFVWGCGKEGQ---LGLGTRPS-VPEPL----ELKVDIRIMSVSAGYYHTAIV 176
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQ-------PFP--LKVA 335
+ G +Y +G + GQLGLG Q PFP +K+A
Sbjct: 177 SAEGKVYAFGDGRNGQLGLGNKTTQSSKPQPIPFPEGIKIA 217
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVD 234
+G ++ +S V +G F +G++ YGQ+ ++ P+ + K R+V
Sbjct: 4 DGVQMASISGKVQQKTRQITEGRAFSFGSNGYGQLGLGHKNPVTRPKCIKGLKD-HRVVL 62
Query: 235 VASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G + + D+ VY +G LG + + +P LI S Q ++
Sbjct: 63 VACGRAHTLVATDDLKVYGFGMNTEHQLGLDSQEFQHTEPALIRSLTGLQ--------IK 114
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
L AG A+T+ G ++WG + GQLGLGT P PL++ V
Sbjct: 115 QLAAGAEHSIALTDKGVAFVWGCGKEGQLGLGTRPSVPEPLELKV 159
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 30/250 (12%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT---GRAHTIVITD 85
CG NS QLG +KG P R P + P+ + ++A G+ H++ +
Sbjct: 46 SCGDNSRGQLG-----RKGTP--------RGEQPERIPALETLNVALVSCGKEHSLAVCH 92
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G S GQ G G +E + K I L G KI+ CG H++ L+E G+
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPK----KIKTLAGIKIIQVACGHYHSVALSEDGQ 148
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FGWG+
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207
Query: 205 SEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
+ GQ++ S +Q P + K + +V ++ G +L +G V+++G YG
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVFTFGDNSYG 266
Query: 258 LLGQGPKVSR 267
LG P +
Sbjct: 267 QLGHDPTAEK 276
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 33/261 (12%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
A+G H++++ + + G+NS GQ GR G + E + I LE + C
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE------RIPALETLNVALVSC 82
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCV 190
G++H+L + G+V++ G ++GQ G+G +ET + + + G +I++++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEF--KETTFIPKKIKTLAGIKIIQVACGHYHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+A+S+ G VF WG + +GQ+ E Q S RV S +G+ + VA+GG L+
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGHHSFALSL 198
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS----KVESLIAGPCTF--- 300
G + WG GQ +S + P ++ P S K +++ C +
Sbjct: 199 SGTSFGWGSNSAGQ-LALSGNNAPV---------QRYKPVSIGALKTLGVVSISCGYKHT 248
Query: 301 GAITNFGHLYMWGKNQYGQLG 321
+T G ++ +G N YGQLG
Sbjct: 249 AVLTQDGKVFTFGDNSYGQLG 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L G V SCG + GQ G E P + +E + +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPA-LETLNVALV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG + GQ+ E + +T P+ + G+ +I+ VA G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG +G LG G + P + S + P ++V + G
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL-----EGIPLAQVAA--GGHH 192
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
+F A++ G + WG N GQL L
Sbjct: 193 SF-ALSLSGTSFGWGSNSAGQLALS 216
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG+ +V ++ ++F G NS QLG + V S IPL
Sbjct: 128 IKIIQVACGHYHSVALSEDG----QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCH 117
+A G H+ ++ + +F +G+NS GQ VQ ++
Sbjct: 184 A---------QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQ------RYKPV 228
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+I L+ ++ CG HT LT+ GKV++ G + GQ G + P LV
Sbjct: 229 SIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV------ 282
Query: 178 ERIVKLSSAVDC 189
ERI L S +DC
Sbjct: 283 ERIEGLVSQIDC 294
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4146
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4205
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4264
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P +P L G +E + G A+ + G +Y WG
Sbjct: 4265 DRLIGLPEGRARNHNRPQQVP-VLAG-------VVIEDVAVGAEHTLALASNGDVYAWGS 4316
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4317 NSEGQLGLG 4325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4016 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4070
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4071 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4129
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4130 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4186
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S + G
Sbjct: 4187 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG------- 4239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P +V V
Sbjct: 4240 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPV 4286
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4240 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQVPVLAGVVIED 4294
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4295 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4349
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 30/250 (12%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT---GRAHTIVITD 85
CG NS QLG +KG P R P + P+ + ++A G+ H++ +
Sbjct: 46 SCGDNSRGQLG-----RKGTP--------RGEQPERIPALETLNVALVSCGKEHSLAVCH 92
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F +G S GQ G G +E + K I L G KI+ CG H++ L+E G+
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPK----KIKTLAGIKIIQVACGHYHSVALSEDGQ 148
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FGWG+
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207
Query: 205 SEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
+ GQ++ S +Q P + K + +V ++ G +L +G V+++G YG
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSIGALKTLG-VVSISCGYKHTAVLTQDGKVFTFGDNSYG 266
Query: 258 LLGQGPKVSR 267
LG P +
Sbjct: 267 QLGHDPTAEK 276
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 33/261 (12%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
A+G H++++ + + G+NS GQ GR G + E + I LE + C
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE------RIPALETLNVALVSC 82
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCV 190
G++H+L + G+V++ G ++GQ G+G +ET + + + G +I++++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEF--KETTFIPKKIKTLAGIKIIQVACGHYHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+A+S+ G VF WG + +GQ+ E Q S RV S +G+ + VA+GG L+
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGHHSFALSL 198
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS----KVESLIAGPCTF--- 300
G + WG GQ +S + P ++ P S K +++ C +
Sbjct: 199 SGTSFGWGSNSAGQ-LALSGNNAPV---------QRYKPVSIGALKTLGVVSISCGYKHT 248
Query: 301 GAITNFGHLYMWGKNQYGQLG 321
+T G ++ +G N YGQLG
Sbjct: 249 AVLTQDGKVFTFGDNSYGQLG 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L G V SCG + GQ G E P + +E + +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPA-LETLNVALV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG + GQ+ E + +T P+ + G+ +I+ VA G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG +G LG G + P + S + P ++V + G
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL-----EGIPLAQVAA--GGHH 192
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
+F A++ G + WG N GQL L
Sbjct: 193 SF-ALSLSGTSFGWGSNSAGQLALS 216
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI +ACG+ +V ++ ++F G NS QLG + V S IPL
Sbjct: 128 IKIIQVACGHYHSVALSEDG----QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCH 117
+A G H+ ++ + +F +G+NS GQ VQ ++
Sbjct: 184 A---------QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQ------RYKPV 228
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+I L+ ++ CG HT LT+ GKV++ G + GQ G + P LV
Sbjct: 229 SIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLV------ 282
Query: 178 ERIVKLSSAVDC 189
ERI L S +DC
Sbjct: 283 ERIEGLVSQIDC 294
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 19/262 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4150
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ +AVS G
Sbjct: 4151 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGS 4209
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4210 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4268
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P +P L G +E + G A+++ G +Y WG
Sbjct: 4269 DRLIGLPEGRARNHNRPQQVP-LLAGVF-------IEDIAVGAEHTLALSSTGDVYAWGS 4320
Query: 315 NQYGQLGLGTVEDQPFPLKVAV 336
N GQLGLG P V V
Sbjct: 4321 NSEGQLGLGHTNHVREPTLVTV 4342
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM--DA 130
++ G H+ +T++ +T+G FG+ G G D + NI L + I +
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSR----NIPTLVKDIINVGEV 566
Query: 131 VCGQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ +
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQS 625
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LA++ G V+ WG SE P+++ + +RIVD++ G S C L+ +
Sbjct: 626 SLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDN 684
Query: 250 LVYSWGYGLLGQ 261
VY+WG +GQ
Sbjct: 685 EVYAWGNNSMGQ 696
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ I + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN---VGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 17/245 (6%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+ G+ T VI+ + G S+G+ G G + K ++ K+ +
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVSSSKG 465
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
HTL T G+V+S G G G+ G G+ + Q+ P L++G ++G+ +V +S+ A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG-LV 251
V++ G+++ WG ++G++ + ++ + + K + + +V+ G S L+ +G V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTV 583
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+S+G G LG G +R KP +I + Q F + + AG + A+T+ G
Sbjct: 584 WSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRKVCAGSQSSLALTSTGQ 634
Query: 309 LYMWG 313
+Y WG
Sbjct: 635 VYAWG 639
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++ GY + T+ + L+ G +LG+ D + P LV +
Sbjct: 516 VSAGYRHSAAVTEDGE----LYTWGEGDFGRLGHGDSNSRNIP-TLVKDII--------- 561
Query: 67 STQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ ++ G +HTI ++ D ++FG G+ G G D + I L+G
Sbjct: 562 --NVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPKVIEALQGM 614
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVK 182
I G +L LT +G+VY+ G GA LG +++ T P L+ E+ RIV
Sbjct: 615 FIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-ELAATRIVD 669
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGS 240
+S LA+S +V+ WGN+ GQ + S I+ P+ + G++ I +++G S
Sbjct: 670 ISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIA-IQQISAGTS 728
Query: 241 ---ACTMLNDEGLVYSW 254
A T L + V +W
Sbjct: 729 HSLAWTALPRDRQVVAW 745
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G I D
Sbjct: 4244 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQVPLLAGVFIED 4298
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L+ +G VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4299 IAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLV-TVLQGKNVRQISA 4353
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 20/146 (13%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYSW 254
K DV+ WG +GQ++E+ + P ++V G CT ++ G V +
Sbjct: 3999 KCDVYLWGAGRHGQLAEAGRNVMIPAAAPSFSPAQQVV----CGQNCTFVIQANGTVLAC 4054
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGH 308
G YG LGQG S + + S L G V L+ + G A+T G
Sbjct: 4055 GEGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESGE 4105
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG YG+LG G + Q P ++
Sbjct: 4106 VFSWGDGDYGKLGHGNSDRQRRPRQI 4131
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 538 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 592
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 593 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 651
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 652 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 710
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 711 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 748
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 612
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 661
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 662 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 691
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 436 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 481
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 541
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 542 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 594
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 595 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 486 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 540
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 541 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 589
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 85.5 bits (210), Expect = 4e-14, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 120/273 (43%), Gaps = 30/273 (10%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQG--KWFCHNIAD----- 121
++ +A G+ H +T + ++GN FGQ G+G ++ +G K AD
Sbjct: 267 RVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP 326
Query: 122 -LEGE---KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
L G K CG HTL LT +G+V+S G GA G G G N + P LV + G
Sbjct: 327 RLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDA-LWG 385
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQCKGVSRIVD 234
+ ++++ + ++S G V+ WG +YG + ++ TP GV R
Sbjct: 386 VGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGV-RCEQ 444
Query: 235 VASGGSACTML--NDEGLVYSWGYGLLGQGP----KVSRSMKPTLIPSTLFGQHQFNPKS 288
+A GG + G++ +WG G GP + + PT+I L G
Sbjct: 445 IACGGDHTLAIAGGGSGVLLAWGRG--SSGPAGTGATADVLTPTIIDRALLGDE------ 496
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
KV + AG A+T G +Y WG GQLG
Sbjct: 497 KVFQISAGSKHSVAVTEGGCVYTWGARTQGQLG 529
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+++ L+G + G H++ +T +G+VY+ G + L + E+
Sbjct: 201 SVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTA 260
Query: 178 E-----RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST------------- 219
R+ ++ AV+ G + WGN E+GQ+ + + S+
Sbjct: 261 TTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRA 320
Query: 220 -----PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP 271
PR++ G + VA G L G V+S+G +G LG G +++ + P
Sbjct: 321 DASMMPRLVGS--GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV-P 377
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
L+ L+G V + AG +++ G +Y WG+ +YG LG V+++ P
Sbjct: 378 RLV-DALWG-------VGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRP 429
Query: 332 LKV 334
V
Sbjct: 430 TPV 432
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/288 (23%), Positives = 115/288 (39%), Gaps = 38/288 (13%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE---- 125
+ H+A G H++ +T + FG+ S G G + + + ++
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFGDCS----GEGKALSAPTRLREAVIDPPEVTATTNAM 265
Query: 126 -KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ----ETPCLVRGEIEGERI 180
++ CGQ H +T SG + S G GQ G G + + L+R + +
Sbjct: 266 PRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMM 325
Query: 181 VKLS-------SAVDC----VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKG 228
+L ++V C LA++ G VF +G +G + + + PR++ G
Sbjct: 326 PRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWG 385
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
V + +A+G + L+ G VY+WG YG LG +RS +PT + Q +
Sbjct: 386 VG-VAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRS-RPTPV------QALDD 437
Query: 286 PKSKVESLIAGPCTFGAITNFGH--LYMWGKNQYGQLGLGTVEDQPFP 331
+ E + G AI G L WG+ G G G D P
Sbjct: 438 AGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTP 485
Score = 42.7 bits (99), Expect = 0.27, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 24/148 (16%)
Query: 199 VFGWGNSEYGQI---------------SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
++ WG + GQ+ SE+ TPR +S G + VA G
Sbjct: 163 LYAWGRCDAGQLGFGAGGFGAPTSRDSSEAAEAYPTPRSVSSLDG-RDVTHVAGGARHSV 221
Query: 244 MLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF----NPKSKVESLIAGPCT 299
+ G VY++G G+G +S PT + + + N +V ++ G
Sbjct: 222 AVTSAGEVYAFG-DCSGEGKALS---APTRLREAVIDPPEVTATTNAMPRVATVACGQRH 277
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVED 327
A+T G L WG ++GQLG G D
Sbjct: 278 CAAVTTSGVLLSWGNEEFGQLGQGPPRD 305
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3013 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDAGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVL-----VAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 758
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3958 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4011
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4012 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4070
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4129
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G H + +G +T+ ++ WG YG+LG
Sbjct: 4130 DSEDQ-LKPKLV-EALQGHHVVDVACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4183 GGSDGCKVPMKI 4194
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 33/250 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4094 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEAL----- 4143
Query: 62 PVKHPSTQIKHLA-----TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
Q H+ +G A T+ +TD++ +++G+ +G+ GRG G
Sbjct: 4144 -------QGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVP 4191
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
I L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++
Sbjct: 4192 MKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQ 4250
Query: 177 GERIVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVD 234
G++++ +++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+
Sbjct: 4251 GKKVIAIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVN 4307
Query: 235 VASGGSACTM 244
+ GSA T+
Sbjct: 4308 RVACGSAHTL 4317
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4096
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G +V ++ S
Sbjct: 4097 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHHVVDVACGS 4155
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4156 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4214
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4215 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4265
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4305
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPVLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3946 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4000
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4061 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4111
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKP 4137
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPVLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVA 599
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4262
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4320
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 35/291 (12%)
Query: 50 LELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED 109
L L+ SF++I + K A G +HT+ + ++ +T+GNN GQ G +
Sbjct: 7 LILIFSFIQIK------AQCWKTAAAGYSHTVAVRNDGTLWTWGNNDEGQLGNSTPAAIN 60
Query: 110 YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETP 168
K N A G HT+ L G +++ G+G GQ G G+ N N P
Sbjct: 61 IPTKMGTAN-------NWKTAAAGWGHTVALKTDGTLWAWGYGRLGQLGNGNYNTNFNLP 113
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCK 227
+ E + + I ++ +A+ + G ++ WGN+ GQ+ + +TP ++
Sbjct: 114 QQIGTENDWQTI---AAGHGHTVALKNDGTLWAWGNNFSGQLGNGTSFDRNTP---TKIG 167
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
S + +++GG L +G +++WG YG LG G + +P Q
Sbjct: 168 SDSNWLAISAGGLYTIALKKDGTLWAWGKNTYGTLGDGTTTNNR-----VPK------QI 216
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ +++ AG AI N G L++WGKN YG LG T D+ P K+
Sbjct: 217 GTDTDWKTIAAGSDHTIAIKNDGSLWIWGKNTYGALGDNTTIDKIVPTKIG 267
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 28/270 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G HT+ + ++ + +GNN GQ G G + + K I + A
Sbjct: 125 IAAGHGHTVALKNDGTLWAWGNNFSGQLGNGTSFDRNTPTK-----IGSDSNWLAISA-- 177
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +T+ L + G +++ G G G G N P + + + + I ++ D +A
Sbjct: 178 GGLYTIALKKDGTLWAWGKNTYGTLGDGTTTNNRVPKQIGTDTDWKTI---AAGSDHTIA 234
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLV 251
+ + G ++ WG + YG + ++ + +++ G A GG T+ + +G +
Sbjct: 235 IKNDGSLWIWGKNTYGALGDN---TTIDKIVPTKIGTDTDWKSAEGGVDYTVAIKTDGTL 291
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WGY G+ G G K++ +LIP Q + + + G A+
Sbjct: 292 WAWGYNADGVFGNGSKIN-----SLIPV------QIGTEKNWQMVSGGSVHTVAVKTDES 340
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
L+ WG N YGQLG GT ++ P + G
Sbjct: 341 LWSWGNNSYGQLGDGTSIEKNIPTLLNCAG 370
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 40/296 (13%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
IACG T+ T+S +++ GLN+ QLG D ++ F P+ V+ P
Sbjct: 118 IACGGAHTLFLTESG----RVYATGLNNFGQLGISDEKR----------FSTEPVEVRIP 163
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ H++ G H+ V+T + + +G NS GQ G G ++ + + L+G
Sbjct: 164 KEAM-HISAGYNHSCVVTADGELYMWGVNSNGQLGLG---KKSAKAVHLPTKVDSLDGIV 219
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN---------NQETPCLVRGEIEG 177
I A G DH++ + + G+V+S G G G+ G GH + ++ TP L++ E+EG
Sbjct: 220 IKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIK-ELEG 278
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVA 236
++ +++ + V + G V+ +G ++S E + +TP ++S +VA
Sbjct: 279 IKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE---EVA 335
Query: 237 SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
GG +L G +YSWG G LG G S + +P + G +P SK
Sbjct: 336 CGGYHTCVLTKGGDLYSWGSNENGCLGNG-----STSVSHLPERVEGPFSKSPVSK 386
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 31/289 (10%)
Query: 60 PLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+P + +K +A G AHT+ +T++ + G N+FGQ GI E+ + +
Sbjct: 104 PVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFGQL--GISDEKRFSTEPVEVR 161
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEG 177
I ++ M G +H+ +T G++Y G ++GQ GLG + + + ++G
Sbjct: 162 IP----KEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDG 217
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI----------STPRVLSQCK 227
I + + D +AV+D G+VF WG+ G++ TPR++ + +
Sbjct: 218 IVIKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELE 277
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGP--KVSRSMKPTLIPSTLFGQHQFN 285
G+ ++ VA+G +++ G VY +G + + +++ P+LI + L
Sbjct: 278 GI-KVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTLL------- 329
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
E + G +T G LY WG N+ G LG G+ P +V
Sbjct: 330 ---DCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERV 375
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3020 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3067
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3068 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3119
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3120 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3178
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3179 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3237
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3238 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYA 3288
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3318
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVL-----VAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 758
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3108 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3157
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3158 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3210
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3211 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3269
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3270 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3327
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3965 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4018
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4019 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4077
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4136
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G H + +G +T+ ++ WG YG+LG
Sbjct: 4137 DSEDQ-LKPKLV-EALQGHHVVDVACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4189
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4190 GGSDGCKVPMKI 4201
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3005 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3063
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3064 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3122
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3123 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3174
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3175 -ALTDEGLVFSWGDGDFGKLGRGGSE 3199
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 33/250 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4101 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEAL----- 4150
Query: 62 PVKHPSTQIKHLA-----TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
Q H+ +G A T+ +TD++ +++G+ +G+ GRG G
Sbjct: 4151 -------QGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVP 4198
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
I L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++
Sbjct: 4199 MKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQ 4257
Query: 177 GERIVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVD 234
G++++ +++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+
Sbjct: 4258 GKKVIAIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVN 4314
Query: 235 VASGGSACTM 244
+ GSA T+
Sbjct: 4315 RVACGSAHTL 4324
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4049 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4103
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G +V ++ S
Sbjct: 4104 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHHVVDVACGS 4162
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4163 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4221
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4222 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4272
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4273 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4312
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPVLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3953 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4007
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4008 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4067
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4068 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4118
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4119 AGDLYTWGKGRYGRLGHSDSEDQLKP 4144
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPVLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVA 599
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4269
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4270 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4327
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3266 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3320
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3321 RVACGSSHSVAWT 3333
>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
Length = 458
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + + L E I+ A CG++HT
Sbjct: 96 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXP-----RLLEGLSHEVIVSAACGRNHT 150
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L L E+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 151 LLLPETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 209
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 210 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 269
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 270 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 322
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 323 SQIYAGYTCSF-AVSEVGGLFFWG 345
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR+L +G+S IV
Sbjct: 87 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLL---EGLSHEVIVSA 143
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + +L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 144 ACGRNHTLLLPETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 196
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 197 CGAEFSMIMDCKGNLYSFGCPEYGQLG 223
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFS----------- 669
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 670 ----IALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 509 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 563
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 564 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 622
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 623 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 681
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 682 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 719
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 468 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 527
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 528 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 583
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 584 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 632
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 633 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 662
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 407 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 452
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 453 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 512
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 513 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 565
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 566 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 602
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 457 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 511
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 512 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 560
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 24 NLKLFG-----CGLNSD--------SQLGYHDPRKKGNPLELVM------SFVRIPLPVK 64
N + FG GLNSD S Y+ G LE + SF P
Sbjct: 119 NKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSP 178
Query: 65 HPSTQIKHL-----ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
T ++H+ A G + ++ +T +++G N Q G G + +
Sbjct: 179 EVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQS-----VPQLV 233
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG------ 173
L+G I+ A CGQ H++ L+ +G VY+ G G GQ G G +++ P V
Sbjct: 234 PHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEE 293
Query: 174 --EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI----------------SESEM 215
E GERIV+++ LA+ G V+ WG++EYGQ + M
Sbjct: 294 GVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAM 353
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
+TPR LS C I V+ G +G VYSWG YG+LG G
Sbjct: 354 ICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHG 403
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+K+ ++A GY F++ T + ++ G N QLG + P +LV
Sbjct: 187 VKVVEVAAGYSFSLAVTSQGE----VYSWGFNEKCQLGLGHRYNQSVP-QLV-------- 233
Query: 62 PVKHPSTQIKHLAT---GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P Q H+ + G+ H+++++ +TFG FGQ G G+ +E + +
Sbjct: 234 ----PHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALV 289
Query: 119 IAD----LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG---------LGHLNNQ 165
A+ GE+I+ CG HTL L SG V++ G GQ G G +
Sbjct: 290 PAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEK 349
Query: 166 E------TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS- 218
TP + G +G+ I +S LA + G V+ WG YG + +
Sbjct: 350 SAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQL 409
Query: 219 TPRVLSQCKGVSRIVDVASGGSACTMLND-EGLVYSWGYGLLGQGPKVS 266
P+++ + G RIV A+G +N ++++ + + P+ S
Sbjct: 410 VPKLIRRIGG-ERIVQTAAGAKHSLAVNAGSSTLFAFDFKVALNNPRYS 457
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 69/274 (25%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVRGEIE 176
+ G++I CG+ H++ + E+G VY G +GQ G G N P V G +
Sbjct: 23 LERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANALKPVRVEG-LR 81
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWG----------NSEY------------------- 207
ER+V + LAV+ G ++ WG N EY
Sbjct: 82 HERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMV 141
Query: 208 ----------GQISESEMQIS--------------TPRVLSQCKGVSRIVDVASGGSACT 243
G E ++S +P V++ + V ++V+VA+G S
Sbjct: 142 GRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVVTGLQHV-KVVEVAAGYSFSL 200
Query: 244 MLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ +G VYSWG+ LG G + ++S+ P L+P L G H + S G
Sbjct: 201 AVTSQGEVYSWGFNEKCQLGLGHRYNQSV-PQLVPH-LQGVH-------IVSATCGQQHS 251
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ GH+Y +G +GQLG G D+ FP +V
Sbjct: 252 VLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRV 285
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 100/249 (40%), Gaps = 35/249 (14%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L+ K+++ G +L +T G+VYS G+ Q GLGH NQ P LV ++G
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLV-PHLQGV 239
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQCKGVS--- 230
IV + + +S G V+ +G +GQ+ S+ ++ +GV
Sbjct: 240 HIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAG 299
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ------------GPKVSRSMK-----PT 272
RIV +A G L G V++WG GQ G + +S P
Sbjct: 300 ERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPR 359
Query: 273 LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP- 331
+ G+H + + G A G +Y WG YG LG G Q P
Sbjct: 360 SLSGCFDGKH-------IAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPK 412
Query: 332 LKVAVGGQK 340
L +GG++
Sbjct: 413 LIRRIGGER 421
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 86/230 (37%), Gaps = 48/230 (20%)
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G G G+ G G N + ++ G+RI ++ +AV + GDV+ WG ++ GQ
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60
Query: 210 ISESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWGY----------- 256
+ E + + + +G+ R+V G + C + G +Y WG
Sbjct: 61 LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANK 120
Query: 257 -------GLLGQGPKVSRSM----KPTLIPSTLFGQH-----------QFNPKS------ 288
GL G + M T + G+ F P +
Sbjct: 121 EYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEV 180
Query: 289 -------KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
KV + AG A+T+ G +Y WG N+ QLGLG +Q P
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVP 230
>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
Length = 484
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 122 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEALSHEAIVLAACGRNHT 176
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LT++G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 177 LALTDTGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCKG 235
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 236 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 295
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DVA G + +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 296 DVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDFPGRGATQIY 352
Query: 294 IAGPCTFGAITNFGHLYMWG 313
C+F A++ G L+ WG
Sbjct: 353 AGYTCSF-AVSEVGGLFFWG 371
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 110/273 (40%), Gaps = 27/273 (9%)
Query: 90 FTFGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLT 141
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 69 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLIT 128
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GK++S G GQ G G E P L+ + E IV + + LA++D G VF
Sbjct: 129 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEA-LSHEAIVLAACGRNHTLALTDTGSVFA 187
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+G ++ GQ+ + P I +A G +++ +G +YS+G YG
Sbjct: 188 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 247
Query: 259 LGQ---GPKVSRSMK------------PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
LG G ++R+ + I T GQ P V + G +
Sbjct: 248 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 307
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ ++ WG YG+LG +D+ P V +
Sbjct: 308 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 340
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 65 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 124
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI + E+++ C
Sbjct: 125 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEALSH-----------EAIVLAACG 172
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T+ G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 173 RNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 216
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--IKALKPEKVKLAAC 132
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAA 192
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI +++ + P ++ K +S I + G + +G +
Sbjct: 193 LTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTTDGEL 249
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFGAITN 305
Y++G G LG +P+ L H+ +P+ + + +I C G
Sbjct: 250 YTFGEPENGKLG-------------LPNQLLINHR-SPQRVLGIPDKVIQVACGGGHTVV 295
Query: 306 FGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 296 LTEKVVYAFGLGQFGQLGLGT 316
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 78 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCIKALKPEK-- 126
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + +D+
Sbjct: 127 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDI---- 179
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ G L N+ C+ G+ I +S
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIG---LKNKSNVCIPHEVTVGKPISWISCG 236
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ +++ VA GG +L
Sbjct: 237 YYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVL 296
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 297 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRI--------KDQKISHISCGENHTAL 347
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T+ G +Y +G ++G+LGLG +Q FP
Sbjct: 348 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFP 378
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P +L+++ R P V
Sbjct: 233 ISCGYYHSAFVTT--DGELYTFGEPENG----------KLGLPNQLLINH-RSPQRVLGI 279
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++ +K
Sbjct: 280 PDKVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IDRIKDQK 334
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 335 ISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTL 380
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN-DEGL 250
V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G T+++ D G
Sbjct: 88 VTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALK--PEKVKLAACGRNHTLVSTDTGG 145
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R T F P ++ L AG T A+T G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRD--------TFHQIGFFTPSDIIKQLSAGANTSAALTEDG 197
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL + P +V VG
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVG 227
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I ++ G AH + + + +T+G G+ G G I L G +
Sbjct: 87 ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAP-----INGLTGITAIS 141
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G +HTL L G ++S G GQ G G+ N P V G+I I +SS
Sbjct: 142 A--GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI---GITSISSGGGH 196
Query: 190 VLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
L + + G V+ WG + +GQ+ + TP Q G++ I++V++G T L +
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPH---QISGLNGIINVSAGVIHSTALKSD 253
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G V++WG G L G K+ + IP Q N + + ++ AG AI +
Sbjct: 254 GTVWNWGCNFRGELANGNKID-----SYIPV------QANGLNGIIAITAGWEFSSAIKS 302
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G ++WG N YGQLG G+ D P++V+
Sbjct: 303 DGTFWVWGVNDYGQLGNGSKSDVTSPMQVS 332
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 29/287 (10%)
Query: 55 SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
S P P+ + T I ++ G HT+ + + +++G N +GQ G G +
Sbjct: 123 SLRTTPAPI-NGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIP--- 178
Query: 115 FCHNIADLEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ G+ I G H+L + G V+S G GQ G G +N TP + G
Sbjct: 179 -----LQVPGQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISG 233
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIV 233
+ G I+ +S+ V A+ G V+ WG + G+++ S V Q G++ I+
Sbjct: 234 -LNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPV--QANGLNGII 288
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
+ +G + + +G + WG YG LG G K S + Q + S +
Sbjct: 289 AITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSK-----------SDVTSPMQVSSLSGI 337
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
++ G A+ G+++ +G+N YGQLG GT P V++G
Sbjct: 338 TAIDTGATYTVALKTDGNIFAFGENTYGQLGNGTTTGSTTPELVSIG 384
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+ +S+ +A+ + G V+ WG ++ G + + S V Q KG++ I +++G +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPV--QVKGLNGITAISAGWA 95
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L +G V++WG G G+ + S++ T P N + + ++ AG
Sbjct: 96 HFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAP--------INGLTGITAISAGWNHT 147
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+ G L+ WG+NQYGQLG G + PL+V
Sbjct: 148 LALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV 181
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 57/278 (20%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPR-----------VLSQCKGV----SRIVDVASGGSACTMLNDEGL 250
GQ+ SE I PR + +CK S + + S + + L + G
Sbjct: 114 GQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQ 173
Query: 251 -------VYSWG---YGLLGQGPKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGP 297
V+ WG YG LG G + P LI S L F Q + AG
Sbjct: 174 VAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-----------VAAGG 222
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
+T G ++ WG+N++GQLGL D+ P+ LK
Sbjct: 223 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLK 260
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 51/297 (17%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-----------EG 177
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R I E
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRKSIFMPVDKNIRIKEC 145
Query: 178 ERIVKLSS---------AVDCVLAVS-----DKGDVFGWGNSEYGQIS---ESEMQISTP 220
++ S A D LA S +VF WG ++YGQ+ + + Q S P
Sbjct: 146 KKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTS-P 204
Query: 221 RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPST 277
+++ G+ + VA+GG+ +L G ++ WG +G LG + R + P L+ S
Sbjct: 205 QLIKSLLGIP-FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PYLLKSL 262
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K+ + G A+T G ++ +G YGQLG + + P KV
Sbjct: 263 --------RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P ++ +R
Sbjct: 213 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVPY--LLKSLR--- 263
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 264 -----SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 313
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 314 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 366
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 143/365 (39%), Gaps = 68/365 (18%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG------------RGIVQEEDY 110
V + I ++ G AHT+ + D + +G +S GQ G + I D
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDK 138
Query: 111 QGKWF-CHNIADLEG--EKIMDAVCGQDHTLFLTESGKVYSCG-----WGAD--GQTGLG 160
+ C A + + + H L ESG+V WG + GQ GLG
Sbjct: 139 NIRIKECKKTASRKSWVSTLCSELAPDSH---LAESGQVAVSASEVFCWGQNKYGQLGLG 195
Query: 161 -HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQIS 218
Q +P L++ + G +++++ ++ G +FGWG +++GQ+ E
Sbjct: 196 IDCKKQTSPQLIKS-LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 254
Query: 219 TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTL 278
P +L + +IV + G L EG V+++G G GQ S S
Sbjct: 255 VPYLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS---------- 303
Query: 279 FGQHQFNPKSKVESLIAGPCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQP 329
H+ NP+ KV L+ T A + + G +Y +G GQLG G+ ++
Sbjct: 304 ---HEINPR-KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 359
Query: 330 FPLKV 334
P V
Sbjct: 360 SPFTV 364
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 538 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 592
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 593 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 651
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 652 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 710
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 711 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 748
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 612
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 661
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 662 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 691
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 436 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 481
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 541
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 542 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 594
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 595 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 486 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 540
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 541 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 589
>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
Length = 500
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 34/260 (13%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 138 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEALSHEAIVLAACGRNHT 192
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LT++G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 193 LALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKG 251
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 252 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 311
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DVA G + +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 312 DVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDFPGRGATQIY 368
Query: 294 IAGPCTFGAITNFGHLYMWG 313
C+F A++ G L+ WG
Sbjct: 369 AGYTCSF-AVSEVGGLFFWG 387
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 120/303 (39%), Gaps = 36/303 (11%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDY----QGK 113
PL V H S Q + + ++ FG ++ GR V Q+ Y Q
Sbjct: 64 PLLVSHHSNQKLEGSKCKGQLLI---------FGATNWDLIGRKEVPKQQAAYRNLGQNL 114
Query: 114 WFCHNIADLEGEKIMDAVCGQ--DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
W H L G ++ V G H+L +T GK++S G GQ G G E P L+
Sbjct: 115 WGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI 174
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR 231
+ E IV + + LA++D G VF +G ++ GQ+ + P
Sbjct: 175 EA-LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQP 233
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQ---GPKVSRSMK------------PTL 273
I +A G +++ +G +YS+G YG LG G ++R+ +
Sbjct: 234 ITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIF 293
Query: 274 IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
I T GQ P V + G + + ++ WG YG+LG +D+ P
Sbjct: 294 IEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRL 353
Query: 334 VAV 336
V +
Sbjct: 354 VKL 356
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 81 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 140
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI + H E+++ C
Sbjct: 141 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEAL---SH--------EAIVLAACG 188
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T+ G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 189 RNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 232
>gi|359319092|ref|XP_544537.3| PREDICTED: protein RCC2 [Canis lupus familiaris]
Length = 460
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 98 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----KLIEGLSHEVIVSAACGRNHT 152
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V + G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 153 LALTETGSVLAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 211
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 212 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 271
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 272 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-KDEMVPRLVKLFDF------PGRGA 324
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 325 SQIYAGYTCSF-AVSEVGGLFFWG 347
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ P+++ +G+S IV
Sbjct: 89 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLI---EGLSHEVIVSA 145
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V ++G +GQ + + +PS + P +K +A
Sbjct: 146 ACGRNHTLALTETGSVLAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 198
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 199 CGAEFSMIMDCKGNLYSFGCPEYGQLG 225
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 41 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 100
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 101 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPKLIEGL---SHEV-----IVSAACGRNH 151
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G + +G+N+ GQLGLG D P P ++ GQ
Sbjct: 152 TLALTETGSVLAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 192
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 29/322 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG T+ + +++ CG N + QLG+ P+ +
Sbjct: 36 VKEVACGGKHTLFLMEDG----QVYSCGWNGEGQLGHSHEGTHPAPVATL---------- 81
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
IKH+A G++H++ ++ +++G + GQ G V+ + I L
Sbjct: 82 --AEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRI----IKKLS 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVK 182
+KI CG DH L L + G++++ G GQ GLG+ +Q +P V+ +EG + +
Sbjct: 136 QQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ ++ Q+ + ++V ++ G
Sbjct: 195 VTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFG 301
+L G ++++G G G G S+ + P + S+V + G T
Sbjct: 255 AILTKAGGLFTFGAG--GSGQLGHDSLHNEINPRRVLELM----GSEVSQIACGRKHTLA 308
Query: 302 AITNFGHLYMWGKNQYGQLGLG 323
+ + G LY +G GQLG G
Sbjct: 309 FVPSSGTLYAFGCGDLGQLGTG 330
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 16/270 (5%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+T +K +A G HT+ + ++ ++ G N GQ G E + +A L E
Sbjct: 33 ATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHS--HEGTHPAP-----VATLAEEH 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I CGQ H+L L+ G +YS G G DGQ G + + + ++ ++I ++S
Sbjct: 86 IKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
D LA+ D G +F WG + +GQ+ + S+P+ + +G+ + V +GGS
Sbjct: 146 DDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIP-LAQVTAGGSHSFA 204
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
L+ G V+ WG GQ +K T H KV + G +T
Sbjct: 205 LSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTH------KVVYISCGEEHTAILT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G L+ +G GQLG ++ ++ P +V
Sbjct: 259 KAGGLFTFGAGGSGQLGHDSLHNEINPRRV 288
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG +D + K P + P++ + ++ +++ G HT ++T
Sbjct: 211 VFGWGKNSAGQLGLNDEQVKETPCHVK--------PLR--THKVVYISCGEEHTAILTKA 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG GQ G + E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGLFTFGAGGSGQLGHDSLHNEINPRR-----VLELMGSEVSQIACGRKHTLAFVPSSGT 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+Y+ G G GQ G GH NN + P +V+G+
Sbjct: 316 LYAFGCGDLGQLGTGHENNVKCPTVVKGK 344
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGI-----VQEEDYQGKWFCHNIADLEGEKIM 128
+ G AH++V + + +GNN+ GQ G GI E QG L G +M
Sbjct: 204 SAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQG---------LRG--VM 252
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G ++L L G +++ G GQ G G + VR + G +V +++
Sbjct: 253 AVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVR-WLSG--VVAMAAGSA 309
Query: 189 CVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
LAV G ++ WG + YGQ+ + + TP+ + +G+SR+V VA+G L
Sbjct: 310 HSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPK---RVQGLSRVVAVAAGDGHSIALCA 366
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+G V++WGY GQ S + P + S V ++ AG A+ + G
Sbjct: 367 DGTVWTWGYNHDGQLAHGSTNDSPVPL--------HVRELSGVVAVAAGALHSLAVLSDG 418
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG N+ GQLG G++ P++V
Sbjct: 419 SVWAWGYNRQGQLGDGSLSSSAEPVRV 445
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 148/356 (41%), Gaps = 67/356 (18%)
Query: 27 LFGCGLNSDSQL---GYHDPRKKGNPLELVMSF-VRIPLPVKHPSTQIKHLATGRAHTIV 82
L+ L SD L G +D ++G+ + +S VR+ + + +A G AH++
Sbjct: 259 LYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWL-----SGVVAMAAGSAHSLA 313
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLT 141
+ + + +G N +GQ G G ++ D + ++G +++ G H++ L
Sbjct: 314 VRSDGTLWAWGANYYGQLGDGTRKDHDTPKR--------VQGLSRVVAVAAGDGHSIALC 365
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V++ G+ DGQ G N+ P VR E+ G +V +++ LAV G V+
Sbjct: 366 ADGTVWTWGYNHDGQLAHGSTNDSPVPLHVR-ELSG--VVAVAAGALHSLAVLSDGSVWA 422
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
WG + GQ+ + + S V + +G+S + V++G + +G V++WG +G
Sbjct: 423 WGYNRQGQLGDGSLSSSAEPV--RVQGLSGVAAVSAGLNHSLARGTDGGVWAWGGNSFGQ 480
Query: 259 LGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKS----------------------- 288
LG+G P R + S F H S
Sbjct: 481 LGEGTTSNALVPVRVRGLSGVETISAGF-NHSLARASDGGLWAWGGNYTGQLGDGTTSNS 539
Query: 289 ----KVESLIAGPCTFG------AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+V+ L F A+ G ++ WG N +GQLG GT P++V
Sbjct: 540 SVPVRVQGLSGVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRV 595
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ P + + ++ G H++ + + + +G+N+ Q G G + Y W +++
Sbjct: 89 PVRVPGLSGVVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLS 147
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
+ ++ G +H+L + G V++ G GQ G G N T + +++G
Sbjct: 148 E-----VVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDG---NILTTRWLPKQVQGLSG 199
Query: 181 VKLSSA--VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
V +SA ++A+SD G V+ WGN+ GQ+ + + + Q +G+ ++ VA+G
Sbjct: 200 VVAASAGWAHSMVALSD-GSVWAWGNNTSGQLGNG-ISVGYGALPEQVQGLRGVMAVAAG 257
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKV--SRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G L +G +++WG +G G G V S S++ + S V ++
Sbjct: 258 GLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWL-------------SGVVAM 304
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG A+ + G L+ WG N YGQLG GT +D P +V
Sbjct: 305 AAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRV 345
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ ++ +A G G ++ ++ G N D QL + +P
Sbjct: 348 LSRVVAVAAGDGHSIALCADG----TVWTWGYNHDGQLAHGSTNDS-----------PVP 392
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L V+ S + +A G H++ + + + +G N GQ G G + + +
Sbjct: 393 LHVRELSGVVA-VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVR-----VQ 446
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L G + A G +H+L G V++ G + GQ G G +N P VRG + G +
Sbjct: 447 GLSGVAAVSA--GLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVPVRVRG-LSG--V 501
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
+S+ + LA + G ++ WG + GQ+ + S+ V + +G+S + V +G +
Sbjct: 502 ETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPV--RVQGLSGVAAVFAGLN 559
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ +G V++WG +G LG+G +T F + S +E++ AG
Sbjct: 560 HSLAVRTDGSVWAWGINSFGQLGEGTT-----------NTSFAPVRVQGLSGMETVAAGS 608
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
++ + G ++ WG N +GQLG G P P++
Sbjct: 609 LHSLSVGSDGSMWSWGNNHHGQLGHGLPGRSPTPVR 644
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+++ +A G H++ + + + +G+N GQ G G + +W + L G +
Sbjct: 147 SEVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTT----RWLPKQVQGLSG--V 200
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSA 186
+ A G H++ G V++ G GQ G G + P V+G + G ++ +++
Sbjct: 201 VAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQG-LRG--VMAVAAG 257
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
LA+ G ++ WG++++GQ + + V + + +S +V +A+G + +
Sbjct: 258 GLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSV--RVRWLSGVVAMAAGSAHSLAVR 315
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G +++WG YG LG G + K P + G S+V ++ AG A+
Sbjct: 316 SDGTLWAWGANYYGQLGDGTR-----KDHDTPKRVQG------LSRVVAVAAGDGHSIAL 364
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG N GQL G+ D P PL V
Sbjct: 365 CADGTVWTWGYNHDGQLAHGSTNDSPVPLHV 395
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 22/253 (8%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G H++ + + + +G N+ GQ G G + + L G ++
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVR-----VRGLSG--VVAVSA 53
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ H+L L G V++ G A GQ G G ++ P V G + G +V +S+ + LA
Sbjct: 54 GEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPG-LSG--VVAVSAGDNHSLA 110
Query: 193 VSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+ G V+ WG++ Q+ + S P L +S +V VA+GG+ + +G
Sbjct: 111 LRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLED---LSEVVAVAAGGNHSLAVRADGT 167
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
V++WG GQ + I +T + Q S V + AG + G ++
Sbjct: 168 VWAWGDNFAGQ-------LGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVW 220
Query: 311 MWGKNQYGQLGLG 323
WG N GQLG G
Sbjct: 221 AWGNNTSGQLGNG 233
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G DH+L L G V++ G A GQ G G ++ P VRG + G +V +S+
Sbjct: 2 AAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRG-LSG--VVAVSAGEGHS 58
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
LA+ G V+ WG++ GQ+ + + V + G+S +V V++G + L +G
Sbjct: 59 LALHRDGTVWAWGDNALGQLGDGTSDSHSEPV--RVPGLSGVVAVSAGDNHSLALRSDGS 116
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
V++WG LG P P + S+V ++ AG A+ G
Sbjct: 117 VWAWGDNNSDQLGGAPGAQSYSVPW----------RLEDLSEVVAVAAGGNHSLAVRADG 166
Query: 308 HLYMWGKNQYGQLGLGTV 325
++ WG N GQLG G +
Sbjct: 167 TVWAWGDNFAGQLGDGNI 184
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ ++ G H++ + G + +G NSFGQ G G + + L G + +
Sbjct: 451 VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVPVR-----VRGLSGVETIS 505
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G +H+L G +++ G GQ G G +N P V+G + G + + + ++
Sbjct: 506 A--GFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQG-LSG--VAAVFAGLNH 560
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
LAV G V+ WG + +GQ+ E S V + +G+S + VA+G + +G
Sbjct: 561 SLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPV--RVQGLSGMETVAAGSLHSLSVGSDG 618
Query: 250 LVYSWG---YGLLGQG-PKVSRSMKPTLIPSTLF 279
++SWG +G LG G P S PT + S L+
Sbjct: 619 SMWSWGNNHHGQLGHGLPGRS----PTPVRSLLY 648
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 2708 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2755
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 2756 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 2807
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 2808 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 2866
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 2867 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2925
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 2926 GKGDYFRLGHGSDV-HVRKPQVV-EGLRGK-------KIVHVAVGALHCLAVTDSGQVYA 2976
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3006
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 2796 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 2845
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 2846 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 2898
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 2899 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 2957
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 2958 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3015
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3735 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 3789
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 3790 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 3848
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 3849 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 3907
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 3908 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 3958
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 3959 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 3998
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2693 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 2751
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 2752 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 2810
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 2811 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 2862
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 2863 -ALTDEGLVFSWGDGDFGKLGRGGSE 2887
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 3787 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 3837
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 3838 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 3889
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 3890 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 3948
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 3949 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4005
Query: 240 SACTM 244
SA T+
Sbjct: 4006 SAHTL 4010
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3651 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 3704
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 3705 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 3763
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 3764 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 3822
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 3823 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 3875
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 3876 GGSDGCKVPMKI 3887
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3639 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3693
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3694 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3753
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 3754 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 3804
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 3805 AGDLYTWGKGRYGRLGHSDSEDQLKP 3830
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 400 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 445
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 505
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+V +A G + + EG +Y+WG YG LG G ++ P L+
Sbjct: 506 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLV 552
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 450 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 504
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 505 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 553
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 12/117 (10%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 520
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM 244
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+
Sbjct: 521 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTL 573
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 3901 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 3955
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 3956 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4013
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 98/254 (38%), Gaps = 64/254 (25%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 502 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 556
Query: 124 GEKIMDAVC--GQDHTLFLTESGKV-YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
G K++D C G TL +TE+ S W ++ LG L V G +E R
Sbjct: 557 GLKVIDVACGSGDAQTLAVTENETTRLSVLW----RSVLGIL-------CVSGVVESFRY 605
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSE------YGQISESEMQ--------------ISTP 220
+L C GW + YG ++ M + TP
Sbjct: 606 NQLGVGCRC--------RQRGWEPPQEDLKFFYGVLTRDVMLREGQIVFEAGRPGCVPTP 657
Query: 221 RVLSQ--------CKGVS------RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
V SQ C G S +++DVA+G + C L ++ V+SWG Q
Sbjct: 658 -VSSQKQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 716
Query: 267 RSMKPTLIPSTLFG 280
R KP P+ L G
Sbjct: 717 RVTKPE--PAALPG 728
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 2954 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3008
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3009 RVACGSSHSVAWT 3021
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 23/251 (9%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4238
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ L VS G
Sbjct: 4239 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV-AALEGYQIGEVACGLNHTLVVSTDGS 4297
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4298 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4356
Query: 257 GLLGQGP--KVSRSMKPTLIP--STLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
L P + +P +P S +F VE + G A++ G +Y W
Sbjct: 4357 DRLIGLPEGRARNHNRPQQVPALSGVF----------VEDIAVGAEHTLALSASGDVYAW 4406
Query: 313 GKNQYGQLGLG 323
G N GQLGLG
Sbjct: 4407 GSNSEGQLGLG 4417
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 518 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDIS--NVGEVSC 570
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 571 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 629
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 630 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 688
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 689 YAWGNNSMGQ 698
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 428 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 477
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 478 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 529
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 530 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 586
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 587 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 645
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 646 LGCGSSEATALRPKLIEEL--------AATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 697
Query: 319 QLGLG 323
Q G G
Sbjct: 698 QCGQG 702
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 394 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 453
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 454 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 511
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 512 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 569
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 570 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 620
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 621 VCAGSQSSLALTSTGQVYAWG 641
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 555 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 608
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 609 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 663
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S GV+ I
Sbjct: 664 LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVA-I 722
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 723 QQISAGTSHSLAWTALPRDRQVVAW 747
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + + L G + D
Sbjct: 4332 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQVPALSGVFVED 4386
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L+ SG VY+ G ++GQ GLGH N+ P LV ++G+ + ++S+
Sbjct: 4387 IAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTS-LQGKSVRQISA 4441
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC- 189
+CGQ+ T + +G V +CG G+ G+ G G+ ++ ++ ++G + +L ++
Sbjct: 4124 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSD 4182
Query: 190 --VLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A+++ G+VF WG+ +YG++ S+ Q PR + +G +V ++ G ++
Sbjct: 4183 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQG-EEVVQMSCGFKHSAVV 4240
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+G ++++G YG LG G ++ + + + L G +Q E T
Sbjct: 4241 TADGKLFTFGNGDYGRLGLGNTSNKKLPERV--AALEG-YQIG-----EVACGLNHTLVV 4292
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
T+ ++ +G YG+LGLG + P KV +
Sbjct: 4293 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI 4326
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 416 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 475
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 476 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 527
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 528 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 559
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 196 KGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYS 253
K DVF WG +GQ++E+ +S P S C+ I G CT ++ G V +
Sbjct: 4087 KCDVFLWGAGRHGQLAEAGRNAVSPPPSPSFCQAQQVIC-----GQNCTFVIQANGTVLA 4141
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFG 307
G YG LGQG S + + S L G V L+ + G A+T G
Sbjct: 4142 CGEGSYGRLGQGN--SDDLHVLTVISALQG-------FVVTQLVTSCGSDGHSMALTESG 4192
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG YG+LG G + Q P ++
Sbjct: 4193 EVFSWGDGDYGKLGHGNSDRQRRPRQI 4219
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 32/288 (11%)
Query: 59 IPLPVKHP---STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
I P + P + ++ ++ GR HT+ + +T G+N +GQ G+ +G
Sbjct: 22 ILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQD-------KGHKR 74
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL-----NNQETPCL 170
I L+ + I CG H L + + +V+S WG D LGH NN P +
Sbjct: 75 PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFS--WGYDDCGQLGHTLEAGGNNSRRPRM 132
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGV 229
V+ E+ +IV+++ LA+S+ G +F WGN+ +GQ+ S P+ L+ G+
Sbjct: 133 VK-ELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI 191
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+ +GGS +L+ G V+ +G +G LG G R PT + S
Sbjct: 192 P-FCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY-PTHVKSL--------R 241
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
KV + G +T G + +G YGQLG + + P KV
Sbjct: 242 SLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKV 289
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 30/321 (9%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +++CG TV ++ CG N QLG K+ P +
Sbjct: 36 MREVSCGRQHTVFVLAEG----TVYTCGSNDYGQLGQDKGHKR-------------PTVI 78
Query: 64 KHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
TQ I+ ++ G H +V+ D F++G + GQ G + E + +L
Sbjct: 79 TALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTL--EAGGNNSRRPRMVKEL 136
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+I+ CG H+L L+ G+++S G + GQ G+G NQ P + + G +
Sbjct: 137 SSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTS-LTGIPFCQ 195
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSA 241
+ + +S G VFG+G + +GQ+ + P + + + ++ ++ G
Sbjct: 196 IVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSL-KVTHISCGEEH 254
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TF 300
+L +G V ++G G GQ S + + +P +F +V L G T
Sbjct: 255 TAVLTLDGGVLTFGAGSYGQLGHNSNNHEA--LPRKVFELMGL----EVTQLACGRMHTM 308
Query: 301 GAITNFGHLYMWGKNQYGQLG 321
+ + G +Y +G GQLG
Sbjct: 309 AYVESSGRIYSFGLGGNGQLG 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I G + V +KS +FG G N+ QLG D + + P
Sbjct: 191 IPFCQIVAGGSHSFVLSKSG----AVFGFGRNTFGQLGLGDTGDR-----------KYPT 235
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
VK S ++ H++ G HT V+T + G TFG S+GQ G E K F
Sbjct: 236 HVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVF----- 290
Query: 121 DLEGEKIMDAVCGQDHTL-FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+L G ++ CG+ HT+ ++ SG++YS G G +GQ G N TP V G
Sbjct: 291 ELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDG 344
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 151 WGA--DGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC----VLAVSDKGDVFGWGN 204
WGA +G+ GLG + E ++ + + K V C + V +G V+ G+
Sbjct: 4 WGAARNGELGLGGI---EEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQ 261
++YGQ+ + + P V++ S I V+ G ++ND+ V+SWGY G LG
Sbjct: 61 NDYGQLGQDKGH-KRPTVITALDTQS-IQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGH 118
Query: 262 GPKV--SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + S +P ++ + + V+ G + A++N G ++ WG N +GQ
Sbjct: 119 TLEAGGNNSRRPRMV-------KELSSLQIVQVACGGKHSL-ALSNDGRIFSWGNNSHGQ 170
Query: 320 LGLGTVEDQPFP 331
LG+G+ ++QP P
Sbjct: 171 LGIGSTKNQPKP 182
>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
Length = 498
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 34/260 (13%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 136 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEALSHEAIVLAACGRNHT 190
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LT++G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 191 LALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKG 249
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 250 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 309
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DVA G + +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 310 DVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDFPGRGATQIY 366
Query: 294 IAGPCTFGAITNFGHLYMWG 313
C+F A++ G L+ WG
Sbjct: 367 AGYTCSF-AVSEVGGLFFWG 385
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 110/273 (40%), Gaps = 27/273 (9%)
Query: 90 FTFGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLT 141
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 83 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLIT 142
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GK++S G GQ G G E P L+ + E IV + + LA++D G VF
Sbjct: 143 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEA-LSHEAIVLAACGRNHTLALTDTGSVFA 201
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+G ++ GQ+ + P I +A G +++ +G +YS+G YG
Sbjct: 202 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 261
Query: 259 LGQ---GPKVSRSMK------------PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
LG G ++R+ + I T GQ P V + G +
Sbjct: 262 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 321
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ ++ WG YG+LG +D+ P V +
Sbjct: 322 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 354
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 79 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 138
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI + H E+++ C
Sbjct: 139 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEAL---SH--------EAIVLAACG 186
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T+ G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 187 RNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 230
>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
stuttgartiensis]
Length = 1590
Score = 85.1 bits (209), Expect = 5e-14, Method: Composition-based stats.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G H++ + N + +GNN GQ G +E + + ++++ +D
Sbjct: 567 IAAGARHSLALKSNGTVWAWGNNGDGQLG-----DETTKNRTIPAQVSNVNAITTIDG-- 619
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H+L L G V+ G DGQ G G + TP + G + I+ ++ + +A
Sbjct: 620 GASHSLALKSDGTVWVWGANWDGQLGDGTNTRKTTPVQISGLSD---IISIACGMYHSIA 676
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G V+ +G ++YGQ+ + V Q G+S ++ +A G C L +G+V+
Sbjct: 677 LKSDGTVWAFGRNDYGQLGDGTNVYRNKPV--QVSGLSDVIAIAGGDYHCLALKSDGIVW 734
Query: 253 SWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+WG G LG G +R+ P + S S V ++ G A+ + +
Sbjct: 735 AWGNNESGQLGDGTTTNRN-TPVQVSSI----------SNVAAIARGWVHSLALKSDETV 783
Query: 310 YMWGKNQYGQLGLGTVEDQPFPL 332
+ WG N GQLG GT ++ P+
Sbjct: 784 WAWGSNGSGQLGDGTTTNRTTPV 806
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 74/310 (23%), Positives = 116/310 (37%), Gaps = 35/310 (11%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N D QLG +K P+++ + I +A G H+I + + +
Sbjct: 637 GANWDGQLGDGTNTRKTTPVQI------------SGLSDIISIACGMYHSIALKSDGTVW 684
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKVYSC 149
FG N +GQ G G Y+ K + G + A+ G D H L L G V++
Sbjct: 685 AFGRNDYGQLGDGT---NVYRNK-----PVQVSGLSDVIAIAGGDYHCLALKSDGIVWAW 736
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G GQ G G N+ TP V + ++ LA+ V+ WG++ GQ
Sbjct: 737 GNNESGQLGDGTTTNRNTPVQVSSI---SNVAAIARGWVHSLALKSDETVWAWGSNGSGQ 793
Query: 210 ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV---YSWGYGLLGQGPKVS 266
+ + T V + G + + G Y W Y
Sbjct: 794 LGDGTTTNRTTPVNITNINNIIAIAGGGGYTIALKSDGTGWTCGEYGWDYSENNGSSYWG 853
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
S + T P + G + V ++ G + G ++ WG N YGQLG GT
Sbjct: 854 YSYRTT--PDQVAGIND------VVAVAGGWQHIVVLKQDGTVWTWGVNWYGQLGDGTTT 905
Query: 327 DQPFPLKVAV 336
D+ P++V +
Sbjct: 906 DRDTPVQVDI 915
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
K+++ LA+ G V+ WGN+ GQ+ + + T + +Q V+ I + G S
Sbjct: 566 KIAAGARHSLALKSNGTVWAWGNNGDGQLGDETTKNRT--IPAQVSNVNAITTIDGGASH 623
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G V+ WG GQ + + K T + Q + S + S+ G
Sbjct: 624 SLALKSDGTVWVWGANWDGQLGDGTNTRKTTPV--------QISGLSDIISIACGMYHSI 675
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+ + G ++ +G+N YGQLG GT + P++V+
Sbjct: 676 ALKSDGTVWAFGRNDYGQLGDGTNVYRNKPVQVS 709
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,697,051,370
Number of Sequences: 23463169
Number of extensions: 244553635
Number of successful extensions: 564376
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 2556
Number of HSP's that attempted gapping in prelim test: 478658
Number of HSP's gapped (non-prelim): 32166
length of query: 340
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 197
effective length of database: 9,003,962,200
effective search space: 1773780553400
effective search space used: 1773780553400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)