BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5892
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 326 bits (835), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 231/341 (67%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 105 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 163
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS GQCGR +V++E Y H +
Sbjct: 164 PLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 224 DFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LA+S G VFGWGNSEY Q++ Q++ PR L GV ++ VA G
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG 341
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GPK+ + P +IP TLFG +FNP+ +V + G
Sbjct: 342 GTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLS 401
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 402 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+P Q+ + G +H +T+ F +G N G G G ++++ + + + G
Sbjct: 388 NPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR------VTMPG 441
Query: 125 EKIMDAVCGQDHTLFLTES 143
E + D CG DH + L +S
Sbjct: 442 EPV-DVACGVDHMVTLAKS 459
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 317 bits (812), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 226/341 (66%), Gaps = 7/341 (2%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+P Q+ + G +H +T+ F +G N G G G ++++ + + + G
Sbjct: 391 NPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR------VTMPG 444
Query: 125 EKIMDAVCGQDHTLFLTES 143
E + D CG DH + L +S
Sbjct: 445 EPV-DVACGVDHMVTLAKS 462
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF--G 301
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S + PR ++ C +V +A G C + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ + +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVTV 305
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 --NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ-DHTLF 139
+ T N+ F G N G G G D Q + L G+KI G H +
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVL 113
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
T G+V++ G A Q G G N+ PC + + +++++++ L ++ G+V
Sbjct: 114 ATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 200 FGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
F WG + GQ+ S S PR ++ C ++++A G + D G VY WGY
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
GQ S +PT P + +V+ + G +T+ G +Y WG N YG
Sbjct: 234 NGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 319 QLGLGTVEDQPFPLKVAV 336
QLG G +Q +P V V
Sbjct: 288 QLGTGNKSNQSYPTPVVV 305
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G G+G + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRLDS-LTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTN----HGLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S ++ K ++ + A T
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE----------KDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A + GH+YMWG+
Sbjct: 324 AKSQGGHVYMWGQ 336
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + T N+ F G N G G G D Q + L G+KI G
Sbjct: 53 TAGNEVLYTTVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGS 107
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H + T G+V++ G A Q G G N+ PC + + +++++++ L +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S PR ++ C ++ +A G + D G VY
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVY 227
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
WGY GQ S +PT P + +V+ + G +T+ G +Y W
Sbjct: 228 VWGYNGNGQLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAW 281
Query: 313 GKNQYGQLGLGTVEDQPFPLKVAV 336
G N YGQLG G +Q +P V V
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVVV 305
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 112 GKWFCHNIADLEGEKIMDAVC----GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C + L+ T + +++ G G G+G + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V S+ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 21/277 (7%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G D + + ++ L
Sbjct: 10 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-----DAEDRPSPTQLSAL 64
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 65 DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 123
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAE 182
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R + P + ST K+ + G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST--------GGEKMSMVACGW 233
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 27/330 (8%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I + CG TV ++S ++++ G +LG+ GN +L F +P+
Sbjct: 68 QIVSVTCGADHTVAYSQS---GMEVYSWGWGDFGRLGH------GNSSDL---FTPLPIK 115
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H +IK +A G +H + +T ++G N GQ G G D + I
Sbjct: 116 ALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKIQAF 169
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I G +HT +TE G +Y GWG G GLG ++ P V GE++
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT-STGGEKMSM 228
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
++ ++VS G ++ +G S+YGQ+ +++ P L S I ++ G
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRH 287
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L +G +Y WG+ GQ + + + + Q +F KV + G
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV------QVRFPDDQKVVQVSCGWRHTL 341
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T +++ WG+ GQLG+G D+ FP
Sbjct: 342 AVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVT 73
Query: 185 SAVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHC 132
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEH 183
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +A G T T+ D L+G G LG D + P + +
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGD----LYGWGWGRYGNLGLGDRTDRLVPERVTST------ 221
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++ +A G HTI ++ + +T+G + +GQ G G D + H +
Sbjct: 222 ----GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKLEA 272
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L I G HT+ LT GK+Y GW GQ G+G+ +Q +P VR + +++V
Sbjct: 273 LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVV 331
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASG 238
++S LAV+++ +VF WG GQ+ E + + P+++ VD ASG
Sbjct: 332 QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS-----VDGASG 384
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
P KV + AG A+ + + WG+ + GQLG G ED+P P +++
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 63
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T + + +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++V+++ +A+
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G VY
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G + P + V ++
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L
Sbjct: 24 ACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE----------GLCG 73
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 74 KKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLS-QCKGVSRIVDVASGGSACT 243
+AV D G+V+GWG + GQ + + Q++ RV + V++IV G +
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV---CGYAHTL 246
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPC 298
L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACHSAH 296
Query: 299 TFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 297 TSAAKTQGGHVYMWGQ 312
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I +TDN+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 135 -DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ G Q G G N P V + +++++++ +A+
Sbjct: 84 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G++F WG + GQ+ S S TPR ++ C R+V++A G ++ + D G VY
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G ++ L P + H V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNNGNQ-----LTPVRVAALHGMC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
Y WG N YGQLG G+ + P ++ V ++
Sbjct: 255 YAWGANTYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L +
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK--------- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G QG +L ++
Sbjct: 75 -KIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN----QGIAPVQVCTNLLIKQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ + + Q+ TP ++ G+ + + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMC-VNQIVCGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF- 300
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 297
Query: 301 -GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ + P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN SFGQ G G + EE + +F + +++ D CG HT+F+ + G VY
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN-------KRVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQISE--SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P L+ S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLS 184
I+ CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGED 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 RVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I ++ G AHT+ + D + +G +S GQ G +V E+ C N
Sbjct: 79 VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEE------CIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 92 FGNNSFGQCGRGIVQEE----DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
+GN S+GQ G G + EE + +F + +K+ D CG HT+F+ + G VY
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN-------KKVRDVGCGLRHTVFVLDDGTVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG
Sbjct: 57 TCGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 208 GQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ + SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTL---FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
+ P LI S L F Q + AG +T G ++ WG+N++GQ
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQ-----------VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 320 LGLGTVEDQPFP 331
LGL D+ P
Sbjct: 222 LGLNDENDRYVP 233
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 26/275 (9%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +++ + G HT+ + D+ +T G N GQ G +++ Q + L+ +
Sbjct: 33 NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQN 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSS 185
I+ CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVAC 144
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHS 202
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+L G ++ WG +G LG + R + P L+ S K+ + G
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKSL--------RSQKIVYICCGEDH 253
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 146/347 (42%), Gaps = 55/347 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV ++ CG N QLG+ RKK +
Sbjct: 35 KVRDVGCGLRHTVFVLDDG----TVYTCGCNDLGQLGHEKSRKKPEQV------------ 78
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
V + I +A G AHT+ + D + +G +S GQ G QG C N
Sbjct: 79 VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG--------LQGSEECIRVPRN 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L +I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-G 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVA 236
+++++ ++ G +FGWG +++GQ+ E P +L + +IV +
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G L EG V+++G G GQ S S H+ NP+ KV L+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------HEINPR-KVFELMGS 294
Query: 297 PCTFGA---------ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
T A + + G +Y +G GQLG G+ ++ P V
Sbjct: 295 IVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I +A G + V T S +FG G N QLG +D + P L+ S
Sbjct: 190 IPFMQVAAGGAHSFVLTLSG----AIFGWGRNKFGQLGLNDENDRYVP-NLLKSL----- 239
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
S +I ++ G HT +T G FTFG +GQ G E K F +
Sbjct: 240 ----RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----E 290
Query: 122 LEGEKIMDAVCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
L G + CG+ HT F+ SG++YS G G +GQ G G +N+++P V+G
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI E+ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGQL 211
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN------PKSKVESLIAGPCTFGA 302
Y++G G LG +P+ L H+ P V+ G T
Sbjct: 212 YTFGEPECGKLG-------------LPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT--V 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGT 278
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 30/321 (9%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T N KL+ G N+ QLG P + V+ P K
Sbjct: 38 TFLSCGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G D + + H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLG-----DTEERSTFHLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV---CVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSAC 242
S V+ +G ++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+L E VY++G G GQ + + T +P + + K+ + G
Sbjct: 256 VVLT-EKAVYTFGLGQFGQ-LGLGTFLFETSVPKAI----EHIKDQKISFIACGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLG 330
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFG---CGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
I+ I+CGY + T + L FG CG K G P +L+++ R+P
Sbjct: 192 ISWISCGYYHSAFVTT--EGQLYTFGEPECG-------------KLGLPNQLLVNH-RMP 235
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV ++ +A G HT+V+T+ + +TFG FGQ G G E K H
Sbjct: 236 QPVPGIPGKVVQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--- 291
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
++ +KI CG++HT +T+ G +Y+ G G G+ GLG N NQ P L
Sbjct: 292 -IKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALK--PEKVKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G RS T F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERS--------TFHLISFFTSQRKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +ACG G TVV T+ ++ GL QLG L + +P
Sbjct: 244 KVVQVACGGGHTVVLTEK-----AVYTFGLGQFGQLG----------LGTFLFETSVPKA 288
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
++H Q I +A G HT +ITD +TFG+ G+ G G+ + C N
Sbjct: 289 IEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLR 348
Query: 122 LEGEKIMDAV-CGQDHTLFL 140
I+ V CG HTL
Sbjct: 349 F----IVQLVSCGGCHTLVF 364
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 42/274 (15%)
Query: 69 QIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
Q++ +A+G AH+++IT +++G N GQ G G ++ D I L+GE
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVP-----KLIESLKGEV 194
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ A CG++HTL LTE+G VY+ G GQ GLG+ P + G+ I K++
Sbjct: 195 FVHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACG 253
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR------------ 231
+ + + KG+++ +G EYGQ+ S+ + R+ C+ ++R
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDG 313
Query: 232 ---------IVDVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLF 279
+ D+A G + +L+ + V+SW GYG LG + M P L+ LF
Sbjct: 314 QILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD-EMVPRLV--KLF 370
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
F + + C+F A++ G L+ WG
Sbjct: 371 ---DFPGRGAAQIYAGATCSF-AVSEMGGLFFWG 400
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 45/297 (15%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
ACG T+ T+ N ++ G N QLG GN + V S P + +
Sbjct: 199 ACGRNHTLALTE----NGSVYAFGENKMGQLGL------GNKTDAVPS----PAQILYNG 244
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-------GIVQEEDYQGKWFCHNIA 120
I +A G ++++ ++FG +GQ G Q +Y + IA
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 121 D-LEGEK-----------IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP 168
+E K + D CG +H+L L +V+S G+G G+ G ++ P
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
Query: 169 CLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
LV+ + G ++ + C AVS+ G +F WG + + S P+ +
Sbjct: 365 RLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGAT-----NTSRDSTMYPKAVQDLC 419
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKPTLIPSTLFG 280
G ++ +A G S+ + DE + SWG +G LG G ++S TL G
Sbjct: 420 GW-KVRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDNKAKSSTTAQEVKTLDG 474
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVAS 237
R V S L ++ +G ++ WG ++ GQ+ ++ +I P+++ KG V A
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKG-EVFVHAAC 200
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G + L + G VY++G +GQ + K +PS + P +KV A
Sbjct: 201 GRNHTLALTENGSVYAFGENKMGQ---LGLGNKTDAVPSPAQILYNGQPITKV----ACG 253
Query: 298 CTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLG 278
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 231 RIVDVASGGSAC--TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFN 285
++ VASG A ++ EG ++SWG G LG G + R P LI S
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG-DIKRIDVPKLIESL-------- 190
Query: 286 PKSKVESLIAGPCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
K E + C A+T G +Y +G+N+ GQLGLG D P P ++ GQ
Sbjct: 191 ---KGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQ 245
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 31/262 (11%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI ++ + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGA 302
+Y +G G LG +P+ L G H+ P+ S++ E +I C
Sbjct: 211 LYVFGEPENGKLG-------------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGT 324
+ +Y +G Q+GQLGLGT
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGT 278
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G D + + H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLG-----DTEERNTFHVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSN---VCVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L +FG N K G P +L+ + R P V
Sbjct: 195 ISCGYYHSAFVTT--DGELYVFGEPENG----------KLGLPNQLLGNH-RTPQLVSEI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+N +TFG FGQ G G E + K I ++ +
Sbjct: 242 PEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFETSEPKV----IENIRDQT 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLS 184
I CG++HT +T+ G +Y+ G G G+ GLG + N P L + IVKL
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL--RFIVKLV 354
Query: 185 SAVDCVLAV 193
+ C + V
Sbjct: 355 ACGGCHMVV 363
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALK--PEKVKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ T F + K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN--------TFHVISFFTSEHKIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI ++ G + T+ + +LF G NS+ Q+G + +S V +P
Sbjct: 141 KIKQLSAGSNTSAALTE----DGRLFMWGDNSEGQIGLKN-----------VSNVCVPQQ 185
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V + ++ G H+ +T + + FG G+ G +++ I
Sbjct: 186 VT-IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-- 242
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EK++ CG +HT+ LTE+ VY+ G G GQ GLG + + V I + I
Sbjct: 243 --EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISY 299
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+S + ++D G ++ +G+ +G++
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKL 327
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG E V+S ++ K S IK + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGLGHK-------EDVLSAQQLSDFCK--SGCIKRITGGGGHSAVVTDE 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G +E Y L G I CG D T+ LTE+G+V
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTP-----CKSLLGCAIQQVACGWDFTIILTENGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C++ IE E++V +++ + LA + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGT 179
Query: 205 SEY--------GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
GQ + P ++ + S+ V V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLEN-SQAVCVLAGSDHSASLTDAGELYVWGS 238
Query: 257 GLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
GQ + + + P I + F K+ ++ +G A T G ++ WG+
Sbjct: 239 NKHGQLASQAAFLLLPQRIEARCF------QNEKIAAVWSGWTHLVAQTVTGKVFTWGRA 292
Query: 316 QYGQLGLGTVEDQ 328
YGQLG TVE +
Sbjct: 293 DYGQLGR-TVETR 304
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 127/307 (41%), Gaps = 57/307 (18%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ N ++ CG NS QLG H PR+ IP
Sbjct: 103 IQQVACGWDFTIILTE----NGQVLSCGSNSFGQLGVPHGPRR-----------CVIPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ ++ +A G H + T + F +G GR + + + +
Sbjct: 148 IELLREKVVSIAAGLRHALAATASGTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTV 206
Query: 123 EGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
G + AVC G DH+ LT++G++Y WG++ G L +Q L+ IE
Sbjct: 207 TGLENSQAVCVLAGSDHSASLTDAGELYV--WGSNKH---GQLASQAAFLLLPQRIEARC 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS---------ESEM---------- 215
E+I + S ++A + G VF WG ++YGQ+ ESE
Sbjct: 262 FQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGP 321
Query: 216 QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPT 272
Q TP L G + I S GS + G+ +SWG+ G+ G G + P
Sbjct: 322 QKGTPSCLPCLTGATEI----SCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEAD-VWAPK 376
Query: 273 LIPSTLF 279
+P F
Sbjct: 377 PVPGLRF 383
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
P + A+ L+ WG N YGQLGLG ED
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKED 35
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKWFCHNIADLEGEKIM 128
L+ G HT ++T N + FG+N++GQ G G I+ K C I L+ EK+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-------KPTC--IKALKPEKVK 90
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
A CG++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ +
Sbjct: 91 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN 150
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+++ G +F WG++ GQI E + + P ++ K +S I + G +
Sbjct: 151 TSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTM 207
Query: 248 EGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV---ESLIAGPCTFG 301
+G +Y++G G LG +P+ L H+ +P+ + E +I C G
Sbjct: 208 DGELYTFGEPENGKLG-------------LPNELLMNHR-SPQRVLGIPERVIQVACGGG 253
Query: 302 AITNFGH--LYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 254 HTVVLTEKVVYAFGLGQFGQLGLGT 278
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 36/331 (10%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG T + T N KL+ G N+ QLG P + ++ P K
Sbjct: 40 LSCGDEHTAIVTG----NNKLYMFGSNNWGQLGLGSKAAIIKP-----TCIKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+K A GR HT+V TD G + G N+ GQ G G + D + AD
Sbjct: 89 ---VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT---- 141
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
I G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCG 198
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTML 245
V+ G+++ +G E G++ + R + G+ R++ VA GG +L
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
E +VY++G +G LG G + + +P +I K+ + G
Sbjct: 259 T-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
+T G LY +G ++G+LGLG +Q FP
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFP 340
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CGY + T D L FG N K G P EL+M+ R P V
Sbjct: 195 ISCGYYHSAFVTM--DGELYTFGEPENG----------KLGLPNELLMNH-RSPQRVLGI 241
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
++ +A G HT+V+T+ + + FG FGQ G G E + K I ++ +K
Sbjct: 242 PERVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQK 296
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCL 170
I CG++HT +TE G +Y+ G G G+ GLG N NQ P L
Sbjct: 297 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 342
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN-DEGL 250
V+ ++ +G++ +GQ+ S+ I P + K V +A+ G T+++ D G
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALK--PEKVKLAACGRNHTLVSTDTGG 107
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VY+ G G LG G R ++ F P ++ L AG T A+T G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIV--------FFTPADTIKQLSAGANTSAALTEDG 159
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L+MWG N GQ+GL + P +V VG
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 189
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 20/120 (16%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG G TVV T+ ++ GL QLG G L S +I
Sbjct: 244 RVIQVACGGGHTVVLTEK-----VVYAFGLGQFGQLGL------GTFL-FETSEPKIIER 291
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF---CHNI 119
+K +I H++ G HT ++T+ +TFG+ G+ G G+ E++ ++F C N
Sbjct: 292 IK--DQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGM---ENFTNQFFPTLCSNF 346
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 30/255 (11%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-----VCGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQ--ISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ + +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S + P ++V AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRSL-----EGIPLAQVA---AGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKVAV 336
L +D+ P V +
Sbjct: 224 LSDEKDRESPCHVKL 238
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ ++GN E + +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGH---EREGNKPEQIGALA------ 82
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
I H+A G +H++ ++D F++G S GQ G++ ED I L
Sbjct: 83 ---DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVA--VPRLIQKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P VR +EG + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
+++ A+S G VFGWG + GQ+ S+ + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCT 299
+L G V+++G G GQ ++ + P + + S+V + G T
Sbjct: 255 AVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM--------GSEVTQIACGRQHT 306
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y +G GQLG G
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + Q I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ-------IGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G+N+ QLG D + + +P VK TQ + +++ G HT V+T
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCH-----------VKLLRTQKVVYISCGEEHTAVLTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
+ G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 33/189 (17%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNP---LELVMSFVRI 59
K+ I+CG T V TKS +F G S QLG+ + NP LEL+ S
Sbjct: 243 KVVYISCGEEHTAVLTKSGG----VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS---- 294
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRG----IVQEEDYQGKW 114
++ +A GR HT+ + G + FG + GQ G G + +G W
Sbjct: 295 ---------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYW 345
Query: 115 FCHN-----IADLEGEKIMDAV-CGQDHTLFLTESGKVYS--CGWGADGQTGLGHLNNQE 166
H+ AD I+ + G D T L + YS + Q L N E
Sbjct: 346 AAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYSPAVDFRTMNQAHYTSLINDE 405
Query: 167 TPCLVRGEI 175
T + R ++
Sbjct: 406 TIAVWRQKL 414
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 214
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKG 273
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 333
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ F P
Sbjct: 334 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDF------PGRGA 386
Query: 291 ESLIAG-PCTFGAITNFGHLYMWG 313
+ AG C+F A++ G L+ WG
Sbjct: 387 SQIYAGYTCSF-AVSEVGGLFFWG 409
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDV 235
R V S L ++ +G ++ WG +E GQ+ + ++ PR++ +G+S IV
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSA 207
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
A G + L + G V+++G +GQ + + +PS + P +K +A
Sbjct: 208 ACGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSPAQIMYNGQPITK----MA 260
Query: 296 GPCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 261 CGAEFSMIMDCKGNLYSFGCPEYGQLG 287
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI H+ + S G
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEGL---SHEV-----IVSAACGRNH 213
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 214 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 254
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L MS +P+P S +K +A +G H
Sbjct: 3013 KVYSCGEATNGRLG------------LGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3171
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3231 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3281
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 602
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ ++
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVI 661
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 720
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 721 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PTALPG 758
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3151 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3203
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3204 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3262
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3167
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3168 -ALTDEGLVFSWGDGDFGKLGRGGSE 3192
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4095
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ S
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4154
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4214 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4304
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4143
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4144 --GHRVIDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4195
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4196 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4254
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4255 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4311
Query: 240 SACTM 244
SA T+
Sbjct: 4312 SAHTL 4316
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3957 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4010
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4069
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4129 DSEDQ-LKPKLV-EALQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4182 GGSDGCKVPMKI 4193
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 622
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS-QFSI---------- 671
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 672 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 701
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3945 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3999
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4110
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKP 4136
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLASL---GVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 491
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 604
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 605 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4261
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4319
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H++ +T++ F++G+ +G+ G G D Q + I L+GE+++ CG H+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEEVVQMSCGFKHSA 4147
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+T GK+++ G G G+ GLG+ +N++ P V +EG +I +++ ++ LAVS G
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGS 4206
Query: 199 -VFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
V+ +G+ +YG++ + S+P+ + G+ I VA G L +G VY++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 257 GLLGQGP--KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
L P + +P IP L G +E + G A+ + G +Y WG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIP-VLAG-------VIIEDVAVGAEHTLALASNGDVYAWGS 4317
Query: 315 NQYGQLGLG 323
N GQLGLG
Sbjct: 4318 NSEGQLGLG 4326
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWGYGLLGQ 261
Y+WG +GQ
Sbjct: 687 YAWGNNSMGQ 696
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 29 GCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRA---HTIVITD 85
CG S +LG D + +L P IK +++ + HT+ T
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTF----------EPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDY----QGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
F++G+ +G+ G G + Y QG L+G+ ++ G H+ +T
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP--------LQGKVVVCVSAGYRHSAAVT 527
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG-DVF 200
E G++Y+ G G G+ G G N++ P LV+ + + ++S +A+S G V+
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVW 584
Query: 201 GWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL- 258
+G + G++ + ++ P+V+ +G+ I V +G + L G VY+WG G
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQSSLALTSTGQVYAWGCGAC 643
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G + +++P LI +++ + G A+++ +Y WG N G
Sbjct: 644 LGCGSSEATALRPKLIEEL--------AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 319 QLGLG 323
Q G G
Sbjct: 696 QCGQG 700
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWG 313
+ AG + A+T+ G +Y WG
Sbjct: 619 VCAGSQSSLALTSTGQVYAWG 639
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSR 231
++GE +V++S V+ G +F +GN +YG++ + S ++ P ++ +G +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY-Q 4187
Query: 232 IVDVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
I VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG------- 4238
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4350
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
IP VK S + ++ G +HTI ++ D ++FG G+ G G D +
Sbjct: 553 IPTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-----DTNRVYKPK 606
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGE 174
I L+G I G +L LT +G+VY+ G GA LG +++ T P L+ E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----CLGCGSSEATALRPKLIE-E 661
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRI 232
+ RIV +S LA+S +V+ WGN+ GQ + S I+ P+ +S G++ I
Sbjct: 662 LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIA-I 720
Query: 233 VDVASGGS---ACTMLNDEGLVYSW 254
+++G S A T L + V +W
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVVAW 745
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHG-NSSTQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I I +ACG F+V T KD ++ FG D +G + R + + +IP+
Sbjct: 4239 IGIKKVACGTQFSVALT--KDGHVYTFG----QDRLIGLPEGRARNHNRP-----QQIPV 4287
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
I+ +A G HT+ + N + +G+NS GQ G G
Sbjct: 4288 LA---GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 132/315 (41%), Gaps = 33/315 (10%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATG 76
A+++ LF G NS QLG P +L F + + IK + G
Sbjct: 7 ASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQL-SDFCQ--------AGCIKSVTGG 57
Query: 77 RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H+ V+TD F G N GQ G G E+ C L G I CG D
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLRGCPIRQVACGWDF 112
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVS 194
T+ LTE G+V SCG A GQ G+ H + C+V IE E++V +++ + LA +
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATT 169
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--------LN 246
G VF WG + P L+ K SR+ + + + C + L
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLPLFLTA-KEPSRVTGLENSTAVCAVAGSDHSASLT 228
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
D G +Y WG GQ SR++ +P + + KV ++ +G A T
Sbjct: 229 DTGELYVWGRNKHGQ--LASRAV---FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTET 283
Query: 307 GHLYMWGKNQYGQLG 321
G ++ WG+ YGQLG
Sbjct: 284 GKVFTWGRADYGQLG 298
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ ++ CG N+ QLG H PRK +P
Sbjct: 103 IRQVACGWDFTIMLTEKG----QVLSCGSNAFGQLGVPHGPRK-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + T F +G GR + ++ + +
Sbjct: 148 IECLREKVVCVAAGLRHALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
LE + AV G DH+ LT++G++Y WG + G L ++ + IE
Sbjct: 207 TGLENSTAVCAVAGSDHSASLTDTGELYV--WGRNKH---GQLASRAVFLPLPQRIEAHY 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G VF WG ++YGQ+
Sbjct: 262 FQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQL 297
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
C ++ L+ WG N YGQLGLG ED P +++
Sbjct: 6 CASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLS 43
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+A A ++ ++++WG YG LG G K + +P L F ++
Sbjct: 1 MARESCASETVSAAAVLFAWGANSYGQLGLGHK-----EDVFLPQQL---SDFCQAGCIK 52
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
S+ G +T+ G L++ G N+ GQLGLG E+
Sbjct: 53 SVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEE 88
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 27/276 (9%)
Query: 59 IPLPVKHPSTQ---IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+PLP + P + +K +A +G H + +T + F++G G+ G G D
Sbjct: 3059 VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-- 3116
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ L +KI D CG H+ ++ G++Y+ G G G+ G G Q P LV
Sbjct: 3117 ---RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA 3173
Query: 174 EIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVS 230
+ G R+V+++ S LA+++ G VF WG+ ++G++ + S TP + + G+
Sbjct: 3174 -LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+V + G L G V++WG Y LG G KP I L G+
Sbjct: 3233 -VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-QHVRKPQPI-GGLRGR------ 3283
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+V + G A+T+ G +Y WG N +GQ G G
Sbjct: 3284 -RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G H + +T + +G G+ G G D + K H L G + D CG
Sbjct: 4143 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMSVADIACGS 4197
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLA 192
H+ +T SG V + G G G+ G G +Q P LV + G R + ++ S L
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL-GYRAIDIACGSGDAQTLC 4256
Query: 193 VSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++D +V+ WG+ +YG++ P + G+ +V V G L G V
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGAV 4315
Query: 252 YSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
Y+WG G LG G V +P + + L G+ K+ S+ G A ++ G
Sbjct: 4316 YTWGKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCVACSDSGE 4366
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+Y WG N GQLG GTV P VA
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRPRLVAA 4394
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNN----QETPCLVRGEIEGERIVKLSS 185
+ G +LF+ ++ GKVY+CG G +G+ GLG +N + P L + + + V + S
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVV---KKVAVHS 3080
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA++ G VF WG E G++ + + PR++ + +I DVA G S
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRA-KKIRDVACGSSHSAA 3139
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CT 299
++ +G +Y+WG YG LG G ++ +KP L+ + L G+ +V + G
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLV-TALAGR-------RVVQVACGSRDAQ 3190
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 3191 TLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + + + L+ GL +LG+ D + P +LV +
Sbjct: 3126 KIRDVACGSSHSAAISSQGE----LYTWGLGEYGRLGHGDNTTQLKP-KLVTALA----- 3175
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G A T+ +T++ F++G+ FG+ GRG + D H I
Sbjct: 3176 ----GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIE 3226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L G ++ CG +L LT +G+V++ WG LGH +Q P + G + G
Sbjct: 3227 RLSGIGVVQIECGAQFSLALTRAGEVWT--WGKGDYYRLGHGGDQHVRKPQPI-GGLRGR 3283
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
R++ ++ LAV+D G V+ WG++++GQ
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + I N A+++G + G G D + IA LE + CG ++
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHG-----DTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI-VKLSSAVDCVLAVSDKG 197
+T G + + G G + G G+ +++ P LV + + V L S LA++ +G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 198 DVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
VF WG+ +YG++ S +L + + R+ V +G L+ EG +Y+WG
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPIL--VESLPRVQRVFAGSQFSVALSSEGQLYTWGKA 799
Query: 258 LLGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
V RS++ +P + QH+ ++ + A+++ G ++ WG+N
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQHK-----RIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 317 YGQLGLGTVEDQPF 330
Q+ +V +P
Sbjct: 855 SQQICPASVSSEPL 868
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG-N 204
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 4053 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 205 SEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
S + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 4110 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4169
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ N S V + G AIT GH+ WGK +YG+L
Sbjct: 4170 HGNRMSYD-RPKLV-------EHLNGMS-VADIACGSAHSAAITASGHVLTWGKGRYGRL 4220
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 4221 GHGDSEDQLRP 4231
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 24/257 (9%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G D +LG+ D + P +I +H ++ + G +++
Sbjct: 632 DSNHNAYSWGTGEDHRLGHGDTHARAVP-------TKIAALEQH---CVQSVYCGCSYSA 681
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ--DHTLF 139
IT T+G ++ + G G + + + L ++D G H+L
Sbjct: 682 AITCGGNLLTWGRGTYARLGHG-----NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLA 736
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G V++ G G G+ G G+ N P LV R+ ++ + +A+S +G +
Sbjct: 737 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL---PRVQRVFAGSQFSVALSSEGQL 793
Query: 200 FGWGNSEY--GQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + Q+ E +Q S PR++S + RIVDVA + C L+ G V+ WG
Sbjct: 794 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQH-KRIVDVAVSVAHCLALSSSGEVFGWGR 852
Query: 257 GLLGQGPKVSRSMKPTL 273
Q S S +P L
Sbjct: 853 NDSQQICPASVSSEPLL 869
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L +G AH++ +T F +G+ +G+ G G + G + L ++
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLP--RVQRVFA 779
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH------LNNQETPCLVRGEIEGERIVKLSSA 186
G ++ L+ G++Y+ WG T LGH + P LV ++ +RIV ++ +
Sbjct: 780 GSQFSVALSSEGQLYT--WGK--ATCLGHQLVERSVQGCSVPRLV-SSLQHKRIVDVAVS 834
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
V LA+S G+VFGWG ++ QI SE + TP ++S + + G AC
Sbjct: 835 VAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVS-------LPTFPASGIAC 887
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
T S G+ + P V +PT
Sbjct: 888 TSAQSLVWTQSSHQGVPRRAPFVVDLGEPTF 918
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G F + G G V K +A L+G+KI+ G
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK-----VAALQGKKIISIATGSL 4356
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + ++SG+VY+ G +GQ G G + + P LV ++G+ IVK++ LA+S
Sbjct: 4357 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV-AALQGKHIVKVTCGSAHTLALS 4414
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ + CG F+V TKS ++ G +LG+ + VR P V
Sbjct: 4296 VVKVECGSQFSVALTKSG----AVYTWGKGDFHRLGHGS-----------VDHVRRPKKV 4340
Query: 64 KH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+I +ATG H + +D+ +T+G+N GQ G G V +A L
Sbjct: 4341 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP-----RLVAAL 4395
Query: 123 EGEKIMDAVCGQDHTLFLTES 143
+G+ I+ CG HTL L+ S
Sbjct: 4396 QGKHIVKVTCGSAHTLALSTS 4416
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 4040 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 4096
Query: 245 LNDEGLVYSWGYGLLGQGPKVSRS--MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ +G +++ GYG G+ PTL+ S QH F K V S G A
Sbjct: 4097 VTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSL---QHVFVKKVAVNS---GGKHCLA 4150
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+T G +Y WG+ + G+LG G
Sbjct: 4151 LTTEGEVYAWGEGEDGKLGHG 4171
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 251 VYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
YSWG G LG G +R++ PT I + QH V+S+ G AIT G
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAA--LEQH------CVQSVYCGCSYSAAITCGG 687
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+L WG+ Y +LG G +D+ P V
Sbjct: 688 NLLTWGRGTYARLGHGNSDDRSLPTLV 714
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 36/230 (15%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+I C + L L++ GK+Y+ W L E L E+ + + ++
Sbjct: 573 QIKQVACCETQMLILSQEGKLYT--W---------RLAKPEAEPLPMEEVAHDVFISIAG 621
Query: 186 AVD--CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR--IVDVASGGSA 241
+ LA+ + + WG E ++ + V ++ + + + V G S
Sbjct: 622 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARA--VPTKIAALEQHCVQSVYCGCSY 679
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ G + +WG Y LG G RS+ PTL+ H + L +G
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSL-PTLV--VALSDHMVVDVA----LGSGDA 732
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGT---------VEDQPFPLKVAVGGQ 339
A+T+ G ++ WG YG+LG G VE P +V G Q
Sbjct: 733 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQ 782
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K + H+A G ++ IT +T+G ++G+ G G ++E +A L+
Sbjct: 547 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA-----IPMLVAGLK 601
Query: 124 GEKIMDAVC--GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G K++D C G TL +TE+G+V+S G G G+ G G + +TP L+ +++ +V
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVV 660
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGS 240
K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+G +
Sbjct: 661 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAAGST 719
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
C L ++ V+SWG Q R KP P+ L G
Sbjct: 720 HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 150/330 (45%), Gaps = 46/330 (13%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHT 80
K++ CG ++ +LG L +S +P+P S +K +A +G H
Sbjct: 3012 KVYACGEATNGRLG------------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN---IADLEGEKIMDAVCGQDHT 137
+T + F++G G+ G + + C I L+ ++I D CG H+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLG--------HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--SAVDCVLAVSD 195
LT SG++Y+ G G G+ G G Q P +V+ + G R+++++ S LA++D
Sbjct: 3112 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTD 3170
Query: 196 KGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G VF WG+ ++G++ + + P+ + + G + + G L G+V++W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G Y LG G V KP ++ L G+ K+ + G A+T+ G +Y
Sbjct: 3230 GKGDYFRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYA 3280
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG N +GQ G GT P V + GQK
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLL- 3149
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H Q+ + A T+ +TD F++G+ FG+ GRG +G NI L
Sbjct: 3150 -GHRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERL 3202
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G+ + CG +L LT+SG V++ G G + G G + P +V G + G++IV
Sbjct: 3203 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVH 3261
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++ LAV+D G V+ WG++++GQ ++ L Q +I VA G S
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS--S 185
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ S
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P Q Q KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPR--------QVQGLQGKKVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--QFNPKSKVESLIAGPCTF 300
G +Y+WG YG LG G ++ +KP ++ L G Q S+ +
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLGHRVIQVACGSRDAQTL------ 3166
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVE 326
A+T+ G ++ WG +G+LG G E
Sbjct: 3167 -ALTDEGLVFSWGDGDFGKLGRGGSE 3191
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I++ D+A G + T + D L+ G +LG+ D + P +LV +
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGD----LYTWGKGRYGRLGHSDSEDQLKP-KLVEALQ---- 4141
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
H I +G A T+ +TD++ +++G+ +G+ GRG G I
Sbjct: 4142 --GHRVVDIA-CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----GSDGCKVPMKIDS 4193
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ CG ++ LT+SG VY+ G G + G G ++ P V+G ++G++++
Sbjct: 4194 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4252
Query: 182 KLSS-AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGG 239
+++ ++ CV D G+V+ WG+++ GQ+ + + I PR+++ +G + V+ + G
Sbjct: 4253 AIATGSLHCVCCTED-GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG--KKVNRVACG 4309
Query: 240 SACTM 244
SA T+
Sbjct: 4310 SAHTL 4314
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G ++ + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3955 YGWGHNHRGQLGG--IEGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4008
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4067
Query: 207 YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ + PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ L G + +G +T+ ++ WG YG+LG
Sbjct: 4127 DSEDQ-LKPKLV-EALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4180 GGSDGCKVPMKI 4191
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 39/215 (18%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQI----SESEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LN 246
++ +G+++ WG YG++ SE E + P +++ KG+ +++DVA G G A T+ +
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDE---AIPMLVAGLKGL-KVIDVACGSGDAQTLAVT 621
Query: 247 DEGLVYSWG---YGLLGQG-------PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ G V+SWG YG LG+G PK+ ++ + G QF+
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS-QFSI---------- 670
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G +Y WGK +LG GT E +P
Sbjct: 671 -----ALTKDGQVYSWGKGDNQRLGHGTEEHVRYP 700
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-SRIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFP 331
G LY WGK +YG+LG EDQ P
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L +I C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANLGVTQI---ACAEKRFLILSRNGRVYTQAYNSDTL----------APQLVQG-L 490
Query: 176 EGERIVKLSSAVD--CVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGV--- 229
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G S + IP + G
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-----SSEDEAIPMLVAGLKGL-- 603
Query: 287 KSKVESLI--AGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
KV + +G A+T G ++ WG YG+LG G
Sbjct: 604 --KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V P P +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G + + G G +D+ + + L+G+K++ G
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRR--PRQVQGLQGKKVIAIATGSL 4259
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + TE G+VY+ G +GQ G G N + P LV ++G+++ +++ LA S
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWS 4317
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 133 AHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAP-----KLIEGLGEEVIVAAACGRNHT 187
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSD 195
L LTE+G VY+ G GQ G G NQ L I+ G+ IVK++ + + V
Sbjct: 188 LALTENGTVYTFGENKLGQLGQG---NQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDC 244
Query: 196 KGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV------------------- 233
KG+++ +G EYGQ+ S+ + R+ C+ + R V
Sbjct: 245 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVV 304
Query: 234 --DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
DVA G + +L+ + V+SWG+G G G K ++P L F + +
Sbjct: 305 ARDVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDFPGRGATQ 361
Query: 292 SLIAGPCTFGAITNFGHLYMWG 313
C+F A++ G L+ WG
Sbjct: 362 IYCGYQCSF-ALSEMGGLFFWG 382
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
L ++ +G ++ WG ++ GQ+ + + L + G IV A G + L + G
Sbjct: 136 LIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGT 195
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF- 306
VY++G G LGQG + + P I Q+N + V+ +A F I +
Sbjct: 196 VYTFGENKLGQLGQGNQTDAVLSPATI--------QYNGQPIVK--VACGAEFSMIVDCK 245
Query: 307 GHLYMWGKNQYGQLG 321
G+LY +G +YGQLG
Sbjct: 246 GNLYSFGCPEYGQLG 260
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 278 LFGQHQFNPKSKVE--SLIAGPCTFGA--ITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
L+G H++ S V+ +++GPC + IT G L+ WG+N GQLG G + P
Sbjct: 109 LWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAP 166
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 38/147 (25%)
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC--TMLNDEGLVYSWGY--- 256
WG YG +S+ +Q+S V SG A ++ EG ++SWG
Sbjct: 110 WGPHRYGCLSD--VQVSC---------------VVSGPCAAHSLIITTEGKLWSWGRNDK 152
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG---AITNFGHLYMWG 313
G LG G R P LI G+ E ++A C A+T G +Y +G
Sbjct: 153 GQLGHG-DTKRLEAPKLIEG--LGE---------EVIVAAACGRNHTLALTENGTVYTFG 200
Query: 314 KNQYGQLGLGTVEDQPF-PLKVAVGGQ 339
+N+ GQLG G D P + GQ
Sbjct: 201 ENKLGQLGQGNQTDAVLSPATIQYNGQ 227
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEALSHEAIVLAACGRNHT 212
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LT++G V++ G GQ GLG+ + P + G+ I K++ + + + KG
Sbjct: 213 LALTDTGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCKG 271
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIV--------------------- 233
+++ +G EYGQ+ S+ + R+ C+ V R V
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 331
Query: 234 DVASGGSACTMLNDEGLVYSW---GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
DVA G + +L+ + V+SW GYG LG + M P L+ LF F +
Sbjct: 332 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLV--KLF---DFPGRGAT 385
Query: 291 ESLIAGPCTFGAITNFGHLYMWG 313
+ C+F A++ G L+ WG
Sbjct: 386 QIYAGYTCSF-AVSEVGGLFFWG 407
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 110/273 (40%), Gaps = 27/273 (9%)
Query: 90 FTFGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLT 141
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 105 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLIT 164
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
GK++S G GQ G G E P L+ + E IV + + LA++D G VF
Sbjct: 165 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEA-LSHEAIVLAACGRNHTLALTDTGSVFA 223
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+G ++ GQ+ + P I +A G +++ +G +YS+G YG
Sbjct: 224 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 283
Query: 259 LGQ---GPKVSRSMK------------PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
LG G ++R+ + I T GQ P V + G +
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 304 TNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ ++ WG YG+LG +D+ P V +
Sbjct: 344 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 376
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 196 KGDVFGWGNSEYGQISESEM--QISTPRVLSQ---------CKGVSRIVDVASGGSAC-- 242
KG + +G + + I E+ Q + R L Q C R+ V SG A
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 160
Query: 243 TMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
++ EG ++SWG G LG G R P LI + E+++ C
Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEALSH-----------EAIVLAACG 208
Query: 300 FG---AITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVAVGGQ 339
A+T+ G ++ +G+N+ GQLGLG D P P ++ GQ
Sbjct: 209 RNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQ 252
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N +++ CG NS QLG + P E + + + + ++ G+ H++ +
Sbjct: 40 NHRVYSCGDNSWGQLGQRRDQSTERP-EPIQALNDL---------HVDLVSCGKEHSVAV 89
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
F +G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 90 CHKGKVFAWGAGSEGQLGIGEFKEISFMPT----KIKALAGIKIIQVSCGHYHSLALSED 145
Query: 144 GKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V+S G ++GQ GLG + +Q P V+ +EG + ++++ A+S G FGW
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGTSFGW 204
Query: 203 GNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
G++ GQ++ S + QI P + K +S ++ ++ G +L +EG V+++G
Sbjct: 205 GSNRSGQLALSGNKVKEQIYKPHSIGALKNLS-VIYISCGYEHTAVLTEEGQVFTFGGNS 263
Query: 259 LGQGPKVSRS 268
GQ RS
Sbjct: 264 SGQLQPSPRS 273
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 58 RIPLPVKHPSTQIKHL--ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
R P +K ++ I+ L A+G H++++ N ++ G+NS+GQ G Q D Q
Sbjct: 10 RKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLG----QRRD-QSTER 64
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGE 174
I L + CG++H++ + GKV++ G G++GQ G+G P ++
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA- 123
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVSRI 232
+ G +I+++S LA+S+ G VF WG + GQ + ++ + P+ + +G+ +
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIP-L 182
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
VA+GG+ L+ G + WG GQ ++ + ++ H + S
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQ-----LALSGNKVKEQIYKPHSIGALKNL-S 236
Query: 293 LIAGPCTF---GAITNFGHLYMWGKNQYGQL 320
+I C + +T G ++ +G N GQL
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G +++ A G+ H+L L + +VYSCG + GQ G + E P ++ + + +
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA-LNDLHVDLV 79
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QIS-TPRVLSQCKGVSRIVDVASGGSA 241
S + +AV KG VF WG GQ+ E +IS P + G+ +I+ V+ G
Sbjct: 80 SCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHYH 138
Query: 242 CTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G K SRS +L G P ++V AG
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKVKSLEGI----PLAQVA---AGGT 190
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
A++ G + WG N+ GQL L
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALS 215
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIP 60
IKI ++CG+ ++ ++ +F G NS+ QLG + R + P + V S IP
Sbjct: 127 IKIIQVSCGHYHSLALSEDG----HVFSWGRNSEGQLGLGKNSRSQAIP-QKVKSLEGIP 181
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHN 118
L +A G H+ ++ +F +G+N GQ V+E+ Y+ H+
Sbjct: 182 LA---------QVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP----HS 228
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
I L+ ++ CG +HT LTE G+V++ G + GQ + Q P L+ G
Sbjct: 229 IGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG 283
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
P ++ G +++ +S L + V+ G++ +GQ+ + Q + Q
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQF 284
+ V+ G + +G V++WG G GQ G S PT I + L G
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAG---- 126
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
K+ + G A++ GH++ WG+N GQLGLG Q P KV
Sbjct: 127 ---IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV 174
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 24/262 (9%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G H+ V+TD F G N GQ G G ++ Y L G I
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP-----CKSLFGCPIQQ 105
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAV 187
CG D T+ LTE+G+V SCG + GQ G+ H + C+V IE E++V +++ +
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGL 162
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM--- 244
+A + G VF WG T + K SR+ + + + C +
Sbjct: 163 RHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 245 -----LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L D G VY WG GQ ++ +P + H F KV ++ +G
Sbjct: 222 DHSASLTDAGEVYVWGSNKHGQ---LANEAAFLPVPQKIEA-HCFQ-NEKVTAIWSGWTH 276
Query: 300 FGAITNFGHLYMWGKNQYGQLG 321
A T G ++ WG+ YGQLG
Sbjct: 277 LVAQTETGKMFTWGRADYGQLG 298
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T +N ++ CG NS QLG H PR+ +P
Sbjct: 103 IQQVACGWDFTIMLT----ENGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH---NI 119
++ ++ +A G H + T + F +G CGR + + + +
Sbjct: 148 IELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-- 177
LE K M + G DH+ LT++G+VY WG++ G L N+ V +IE
Sbjct: 207 TGLENSKAMCVLAGSDHSASLTDAGEVYV--WGSNKH---GQLANEAAFLPVPQKIEAHC 261
Query: 178 ---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G +F WG ++YGQ+
Sbjct: 262 FQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
YG LG G K + L+P L + F V + G +T+ G L++ G N
Sbjct: 25 YGQLGLGHK-----EDVLLPQQL---NDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 316 QYGQLGLGTVEDQPF 330
+ GQLGLG ED P+
Sbjct: 77 KDGQLGLGHTEDIPY 91
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 31/279 (11%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-RGIVQEEDYQGKWFCHNIADLEGE 125
+ +I + G H ++++ + F + N S I+QE+
Sbjct: 96 NMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEK----------------- 138
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLS 184
KI+ CG H+L L++ G++++ G GQ G+G + TP +V + G + ++S
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPLAQIS 197
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ +A+S G+++ WG +E GQ+ + L + ++ VA GGS +
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257
Query: 245 LNDEGLVYSWGYGLLGQ--GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TFG 301
L +GL++++G G GQ ++P L+ + L G +V + G T
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGY-------RVTQIACGRWHTLA 309
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
+++ G ++ +G + GQLG G DQ PL V V +
Sbjct: 310 YVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I L+ G + VITD FTFG G+ G G E+ + + L+G I+
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLG---EQSLLMQSTPKLVQSLQGHFII 395
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGE-------RI 180
D G H+L LT G V+S G GQ G+G +NQ+T P ++ + I
Sbjct: 396 DMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINI 455
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKGV----SRIV 233
+K+S+ +A+SD D + WG S+YG + S + + R VL V + +
Sbjct: 456 IKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTS-IDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 234 DVASGGSACTMLNDEGLVYSWG 255
DV+SG ++ +G +YSWG
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWG 536
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 126/301 (41%), Gaps = 51/301 (16%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I ++TG H+ ITD +TFG+ G+ G G + E Y +++
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNL--ESYSSPKLVEFFQTKPSLRVV 246
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQETPCLVRGEIEGE------- 178
G H+L LT GKVYS G Q GLG+ + P L+ I
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 179 --------------------------------RIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
+IVKLS + ++DKG +F +G +
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 207 YGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLG 260
+G++ +S + STP+++ +G I+D++SGG +L ++GLV+S+G G LG
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQG-HFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++ P I Q Q + + AG AI++ Y WG++ YG L
Sbjct: 426 IGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVL 485
Query: 321 G 321
G
Sbjct: 486 G 486
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 22/230 (9%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIVKL 183
KI+ CG + + +T+ G +++ G G G+ GLG L Q TP LV+ ++G I+ +
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQS-LQGHFIIDM 397
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQ--ISESEMQISTPRVLSQCKGVS-------RIVD 234
SS L +++KG VF +G ++ GQ I Q + P+ + + I+
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKV--SRSMKPTLIPSTLFGQHQFNPKSK 289
V++GG ++D Y+WG YG+LG V R++ P LI S K
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNL-PVLINSN----SVVVDNVK 512
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+ +G A++ G LY WG N +LG + E+Q P K + +
Sbjct: 513 FIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSK 562
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I D++ G G ++V T +K L +F G N QLG + + + F
Sbjct: 394 IIDMSSGGGHSLVLT---NKGL-VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI-VQEEDYQGKWFCHNIADL 122
+ P IK ++ G H+I I+DN + +G + +G G I VQ + N +
Sbjct: 450 QQPINIIK-VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVV 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP--CLVRGE 174
+ K +D G H + ++ G +YS G A + G NQ TP C + +
Sbjct: 509 DNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSK 562
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
S+ +IV +++G + + D+G +Y++G GLLG K+ + L
Sbjct: 181 FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLG---KLGHGNLESYSSPKLVEFF 237
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
Q P +V S+ G A+T G +Y WG N QLGLG
Sbjct: 238 QTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVK 182
+KI+ G H+ F+T+ G +Y+ G G G+ G G+L + +P LV R+V
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+++ LA++ G V+ WG ++ Q+
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQL 275
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 25/275 (9%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ A+G H++++ N + G+NS GQ GR Q + I LE
Sbjct: 21 PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE-----LPEPIQALETL 75
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLS 184
+ CG++H+L + G+V++ G G++GQ G+G TP + + +I+++S
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVS 134
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S VF WG + +GQ+ E Q S RV S +G+ + VA+GG+
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAH 192
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSR-----SMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L+ G + WG GQ R S KP + + V + G
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGAL--------KNLGVVYISCG 244
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T G ++ +G N+ GQLG ++ P
Sbjct: 245 DAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG+ ++ +K ++F G NS QLG + V S IPL
Sbjct: 128 IKIIQVSCGHYHSLALSKDS----QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQC---GRGIVQEEDYQGKWFCHN 118
+A G AH+ ++ +F +G+NS GQ GR + + + +
Sbjct: 184 ---------AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL-----S 229
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ L+ ++ CG HT LT+ GKV++ G GQ G + P LV E
Sbjct: 230 VGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLV------E 283
Query: 179 RIVKLSSAVDC-----VLAVSDKGDV--FGWGNSEYGQISESE 214
RI L S +DC + V G V FG G S+ + + E
Sbjct: 284 RIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPE 326
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 125/319 (39%), Gaps = 60/319 (18%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG----IVQEEDYQGKW 114
+P +++P + + +A G H +V++ + +G N FGQCG G I G W
Sbjct: 767 LPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDW 826
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLVR 172
I CGQ H+ F+ G +++ GWG GQ G G N NQ P V
Sbjct: 827 ----------PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVN 876
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE----MQISTPRVLSQCKG 228
G I ++ +++ + ++D G V G+ YGQ+ + + TP L G
Sbjct: 877 GLI--CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL----G 930
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYG------------------------------- 257
R+ D+A+ + ++ V+ WG
Sbjct: 931 PLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPS 990
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNP--KSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G P+V+ ++ P IP G + + S+ G IT+ G LY WGK
Sbjct: 991 TNGSTPRVNLNL-PAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKG 1049
Query: 316 QYGQLGLGTVEDQPFPLKV 334
QLG G ++ P +V
Sbjct: 1050 LDYQLGHGNKNERMEPHQV 1068
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 56/244 (22%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL- 61
K+T IACG TVV T + ++ CG S Q+G D KK V +F +PL
Sbjct: 881 KVTQIACGRAHTVVLTDTG----RVLVCGSGSYGQMGVDDDIKK------VFAFTPLPLG 930
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
P++ ++ +AT H+I IT++ F +G N R V ++ + N D
Sbjct: 931 PLR-----VRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQ--LKNTED 983
Query: 122 ------------------------------------LEGEKIMDAVCGQDHTLFLTESGK 145
L+G I+ CG H+ +T G
Sbjct: 984 PSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDG-NIVSVACGLSHSALITSEGT 1042
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+Y+ G G D Q G G+ N + P V E G + V +S + +A +D G VF WG +
Sbjct: 1043 LYTWGKGLDYQLGHGNKNERMEPHQV-FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKN 1101
Query: 206 EYGQ 209
++GQ
Sbjct: 1102 DFGQ 1105
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 67/302 (22%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE---- 125
I+ +A G+ H+ I + +TFG +GQ G G G+ + +
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHG--------GRNNSNQLVPTRVNGLIC 880
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
K+ CG+ HT+ LT++G+V CG G+ GQ G+ + ++ + R+ +++
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDD-DIKKVFAFTPLPLGPLRVRDIAT 939
Query: 186 AVDCVLAVSDKGDVFGWG----------------------NSEYGQISESEMQISTPRV- 222
+ +++ VF WG N+E STPRV
Sbjct: 940 HYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVN 999
Query: 223 LSQCKGVSR---------------IVDVASGGSACTMLNDEGLVYSWGYGL---LGQGPK 264
L+ + R IV VA G S ++ EG +Y+WG GL LG G K
Sbjct: 1000 LNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNK 1059
Query: 265 VSRSMKPTLIPSTLFGQHQ-FNPK-SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
R M+P HQ F P +K ++ G A T+ G ++ WGKN +GQ G+
Sbjct: 1060 NER-MEP----------HQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Query: 323 GT 324
T
Sbjct: 1109 LT 1110
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +ACG + + T + L +G GL D QLG+ + ++ P + V
Sbjct: 1024 IVSVACGLSHSALITS--EGTLYTWGKGL--DYQLGHGNKNERMEPHQ-----------V 1068
Query: 64 KHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
P+ + +++ G HTI TD+ F +G N FGQCG
Sbjct: 1069 FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 123/305 (40%), Gaps = 59/305 (19%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLN------SDSQLGYHDPRKK-GNPLELVM 54
+++T + C T T + GC SD LGY D +K+ P ++
Sbjct: 174 LRVTKVICSDNLTAAITDN--------GCCFTWGTFRCSDGVLGYSDSQKRTAEPTQM-- 223
Query: 55 SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
R+P +I LATG H I +T +T+GN Q GR +++ QG
Sbjct: 224 ---RLP--------EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG-- 270
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-----TPC 169
L + I+ G H+ + G+VY+ G Q G+ + +E P
Sbjct: 271 --LTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 170 LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ-------ISESEMQ------ 216
LV +EG + ++ LA+ + G V WG + Q + E+ ++
Sbjct: 329 LVDA-LEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNN 387
Query: 217 --ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKP 271
+STP ++ G++ ++ V G + +G VYSWG +GQG P
Sbjct: 388 YYLSTPTIIP---GLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVP 444
Query: 272 TLIPS 276
TL+ S
Sbjct: 445 TLVRS 449
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 135/339 (39%), Gaps = 53/339 (15%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-----QIK 71
+T+S K ++ G+ +L D K G +P PV+ P + +I
Sbjct: 6 STRSSTKREEVSKNGVEK-RELDESDVMKNGKKPVKRAKVSSLPKPVRVPGSAKRINKIP 64
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
L T R + + FG+ S + G G +E D + + I + ++D
Sbjct: 65 ELPTERLN---------VYVFGSGSMNELGMG-EEEMDVVYRPRLNPILSTDKVGVVDLA 114
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---------------TPCLVRGEIE 176
G H+ L+ G+VY+ WG + LG L + TP V G +
Sbjct: 115 VGGMHSAALSHDGRVYT--WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALS 172
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ----ISESEMQISTPRVLSQCKGVSRI 232
R+ K+ + + A++D G F WG S+S+ + + P + + I
Sbjct: 173 HLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR----LPEI 228
Query: 233 VDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A+G L G VY+WG G LG+ R ++ L P L ++
Sbjct: 229 CQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQ-GLTPQPLALKN------- 280
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
+ S+ AG AI N G +Y WG N Q G+ VED+
Sbjct: 281 IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI-EVEDE 318
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 21/269 (7%)
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
T ITDN FT+G +F +C G++ D Q + + +I G DH +
Sbjct: 186 TAAITDNGCCFTWG--TF-RCSDGVLGYSDSQKR--TAEPTQMRLPEICQLATGTDHIIA 240
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT +GKVY+ G G Q G L + L + + I+ + + A+ +KG V
Sbjct: 241 LTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRV 300
Query: 200 FGWG---NSEYGQISESEMQ---ISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVY 252
+ WG + G E E + I+ P ++ +G + V +GG T+ L ++G V
Sbjct: 301 YAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYN--VKSITGGEHHTLALLEDGRVL 358
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL------IAGPCTFGAITNF 306
+WG Q ++ T++ + + + + L + G A+T+
Sbjct: 359 AWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSD 418
Query: 307 GHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
G +Y WG + ++G G ED P V
Sbjct: 419 GKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 100/254 (39%), Gaps = 64/254 (25%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFG---------------------------QCGR 102
IKH+A G T +TD TFG+ S G CG
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 103 GIVQEEDYQGKWFC----------------HN----IADLEGEKIMDAVCGQDHTLFLTE 142
V G+ F HN + G++ VCG D ++ LT
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTS 518
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA------VDCV------ 190
G+V +CG + GL HL+ E P + E L SA + CV
Sbjct: 519 PGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAH 578
Query: 191 -LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLND 247
A++ GD + +G++++GQ+ S ++S R + +G+ ++V VA G + +
Sbjct: 579 SAAITASGDCYTFGSNQHGQLGTSSRRVS--RAPCRVQGLEGIKMVMVACGDAFTVAVGA 636
Query: 248 EGLVYSWGYGLLGQ 261
EG VYSWG G G+
Sbjct: 637 EGEVYSWGKGTRGR 650
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 10/165 (6%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV---------QEEDYQGKWFC 116
P + + + G ++++T G+N F + G + Q+ + +
Sbjct: 499 PGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTP 558
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
A L+ E ++ G H+ +T SG Y+ G GQ G PC V+G +E
Sbjct: 559 LGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG-LE 617
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
G ++V ++ +AV +G+V+ WG G++ + PR
Sbjct: 618 GIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPR 662
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 115/286 (40%), Gaps = 13/286 (4%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSR 389
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G+L + P +V + G
Sbjct: 390 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEA-LLG 448
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVA 236
+V+++ VLA+S G++F WG + G++ + + P+ + G V
Sbjct: 449 YEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPG-QEAQRVV 507
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH-QFNPKSKV----E 291
G + +L G V + G + S+ +P + F P E
Sbjct: 508 CGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQE 567
Query: 292 SLIA---GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L+ G AIT G Y +G NQ+GQLG + P +V
Sbjct: 568 PLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRV 613
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPL-----ELVMSFVRIPL 61
+ CG +++ T ++ CG N ++LG P+ E +SF PL
Sbjct: 506 VVCGIDSSMILTSPG----RVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFT--PL 559
Query: 62 PVKHPSTQIKHLAT--GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P Q L G AH+ IT + +TFG+N GQ G + C +
Sbjct: 560 G-SAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLG----TSSRRVSRAPC-RV 613
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
LEG K++ CG T+ + G+VYS G G G+ G
Sbjct: 614 QGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 31/235 (13%)
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT---GLGHLNNQETPCLVRGE 174
+I + EG K + AV G H+ LT G+VY CG G G+ + + V+ E
Sbjct: 178 DIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFE 237
Query: 175 --IEGE-RIVKLSSAVDCVLAVSDKGDVFGWGN--SEYGQISE----SEMQISTPRVLSQ 225
IE E +IV L++ A++D+G V WGN + G + +MQ + ++ Q
Sbjct: 238 EDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQ 297
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF----GQ 281
K +IV +A+G + ML+++G + ++G G +GQ + RS + I S G
Sbjct: 298 AK--RKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQ---LGRSSRTKTIRSKYMCDESGD 352
Query: 282 H-----QFNPKSKVESLIAG---PCTFGAITN--FGHLYMWGKNQYGQLGLGTVE 326
H +F K K ++A F I + G Y +G N Y QLG+ E
Sbjct: 353 HLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDE 407
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 22/190 (11%)
Query: 59 IPLPVKHP----STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ-------E 107
+PL KH K++ TIV ++ + FG N++ Q G + + +
Sbjct: 356 VPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQ 415
Query: 108 EDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL---- 162
++ + + F A G E+ + G H + L GKV++ G D GLG+
Sbjct: 416 DNRELRVFLPAEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKD 475
Query: 163 NNQETPCLVRGEIE-GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-----SESEMQ 216
+ Q EIE +IV +S+ + +A S+ G + WG GQ+ E E
Sbjct: 476 DQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKM 535
Query: 217 ISTPRVLSQC 226
+S P +S
Sbjct: 536 VSKPEEISSA 545
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 44/291 (15%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI +A G FT T ++ +G NS+ + H L+ P+
Sbjct: 245 KIVMLAAGASFTAALTDQG--SVIAWGNLRNSNGNVDVH---------PLLHKMQEAPVV 293
Query: 63 VKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----- 116
+ H + + I +A G H +++ + TFG+ GQ GR + + + K+ C
Sbjct: 294 IVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRS-SRTKTIRSKYMCDESGD 352
Query: 117 HNIADLEGE---KIMDAVCGQDH-----TLFLTESGKVYSCGWGADGQTGL--------- 159
H + L + K D V T+ E GK Y+ G Q G+
Sbjct: 353 HLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQ 412
Query: 160 GHLNNQETPCLVRGEIE---GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI------ 210
+N+E + E ER V V+ + G VF G + +
Sbjct: 413 DGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLGNWT 472
Query: 211 SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ + Q + + + S+IV V++ + +++G Y+WG+ GQ
Sbjct: 473 GKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQ 523
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 18/268 (6%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+ + + G AH V+T + +T+ N G G + D ++ L+G+ +
Sbjct: 352 RARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQ 411
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSSA 186
CG D T+ +T+ G++YS G G G+ E P LV + E + ++S
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFL-NEPVDQVSCG 470
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
++A++ V+ WG EYG++ +SE + +P+ + +G+ IV+V G +L
Sbjct: 471 DSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLC-IVNVCCGSDGSFLL 529
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMK-------PTLIPSTLFGQHQFNPKSKVESLIA 295
G V + G + LG + + P TL Q F K+ S+
Sbjct: 530 TLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSF---YKIRSISP 586
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G AI G L +G N+ GQLG+G
Sbjct: 587 GRTHTAAIDERGRLLTFGSNKCGQLGVG 614
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 192 AVSDKGDVFGWGNSE-----YGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTML 245
V+ + +++ W N + +GQ+ + P+ + + +G S + V+ G +
Sbjct: 365 VVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKS-VQKVSCGSDFTVCI 423
Query: 246 NDEGLVYSWG---YGLLGQGPKV-SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
DEG +YS+G YG LG S ++P L+ F V+ + G
Sbjct: 424 TDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLV--------DFFLNEPVDQVSCGDSHIM 475
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+T +Y WG +YG+LGL + +D P KV V
Sbjct: 476 ALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEV 510
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G T+ ITD ++FG++ +G G + + + D + +D
Sbjct: 410 VQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVN----QSAGSEVLEPLLVDFFLNEPVD 465
Query: 130 AV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
V CG H + LT S VYS G G G+ GL ++ +P V + G IV + D
Sbjct: 466 QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ-RGLCIVNVCCGSD 524
Query: 189 CVLAVSDKGDVFGWGNSEYGQI-------------SESEMQISTPRVLSQCKGVSRIVDV 235
++ G V G +E+ ++ + E+ +T L++ +I +
Sbjct: 525 GSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSI 584
Query: 236 ASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+ G + +++ G + ++G G LG G + + L+ L G+ +V
Sbjct: 585 SPGRTHTAAIDERGRLLTFGSNKCGQLGVG-DYRKHLGINLLGGPLGGK-------QVIR 636
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
+ G A T H++ WG G+L + T ++P
Sbjct: 637 VSCGDEFTTAATADNHIFAWGNGGNGRLAM-TPNERP 672
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 30/220 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG + T+SK ++ +GCG L DS+ + P+K +E+
Sbjct: 464 VDQVSCGDSHIMALTRSK--SVYSWGCGEYGRLGLDSEDDVYSPQK----VEVQRGLC-- 515
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-----RGIVQEEDYQGKW 114
I ++ G + ++T G N + G GI+ E +Q
Sbjct: 516 ----------IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVP 565
Query: 115 FCHNIA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ ++ L KI G+ HT + E G++ + G GQ G+G L+
Sbjct: 566 YTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLL 625
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G + G++++++S + A + +F WGN G+++
Sbjct: 626 GGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLA 665
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P+K P L++ V+
Sbjct: 482 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 539
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG-----QCGRGIVQEEDYQGKW 114
G T ++T + G N F QC GI+ E Y
Sbjct: 540 ----------------GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVP 583
Query: 115 FCHNIA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ + L KI G+ HT + E G++ + G GQ G+G+ + L+
Sbjct: 584 YTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLL 643
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G + G++++++S + +A +D +F WGN G+++
Sbjct: 644 GGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 26/275 (9%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
+ + G H V+T + +T+ N G G + D ++ L+G+ I
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 131 VCGQDHTLFLTESGKVYSCG------WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
CG D T+ +T+ G++Y+ G G D G L + + +E ++S
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVE-----QVS 486
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI-IVAVQCGCDGTF 545
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMK-------PTLIPSTLFGQHQFNPKSKVESL 293
+L G V + G + LG +S + P TL Q F K+ ++
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF---YKIRTI 602
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
G AI G L +G N+ GQLG+G + +
Sbjct: 603 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++ ++ G H +V+T N+ +++G +G+ G+ EEDY + D+
Sbjct: 479 SNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRL--GLDSEEDY----YTPQKVDVPKAL 532
Query: 127 IMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGL-----GHLNNQE-------TPCLVRG 173
I+ AV CG D T LT+SGKV +CG + GL G +N++ T +
Sbjct: 533 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 592
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRI 232
++ +I ++ A+ ++G + +G ++ GQ+ + +L G ++
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQV 652
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP 275
+ V+ G D+ +++WG G G G +M PT P
Sbjct: 653 IRVSCGDEFTIAATDDNHIFAWGNG--GNG---RLAMTPTERP 690
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 36/277 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ----EEDYQGKWFCHNIADLEGE 125
I+ ++ G T+ +TD + FG++ +G G V E Q +F N
Sbjct: 428 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSN------- 480
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ CG +H + LT + +VYS G G G+ GL + TP V + IV +
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP-KALIIVAVQC 539
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI-------------SESEMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ + E+ +T L++ +I
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 233 VDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
E IA T+ H++ WG G+L + E
Sbjct: 659 DEFTIAA-------TDDNHIFAWGNGGNGRLAMTPTE 688
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 193 VSDKGDVFGWGNSE-----YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
V+ + +++ W N + +GQ+ + P+ + + +G + I V+ G +
Sbjct: 384 VTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA-IRQVSCGDDFTVCVT 442
Query: 247 DEGLVYSWG---YGLLG----QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
DEG +Y++G YG +G GP+V M Q F + VE + G
Sbjct: 443 DEGQLYAFGSDYYGCMGVDKVAGPEVLEPM-----------QLNFFLSNPVEQVSCGDNH 491
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+T +Y WG +YG+LGL + ED P KV V
Sbjct: 492 VVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P++ P L++ V+
Sbjct: 482 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQ- 538
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG-----QCGRGIVQEEDYQGKW 114
G T ++T + G N F QC GI+ E Y
Sbjct: 539 ---------------CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVP 583
Query: 115 FCHNIA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ + L KI G+ HT + E G++ + G GQ G+G+ + L+
Sbjct: 584 YTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLL 643
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G + G++++++S + +A +D +F WGN G+++
Sbjct: 644 GGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 26/275 (9%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
+ + G H V+T + +T+ N G G + D ++ L+G+ I
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 131 VCGQDHTLFLTESGKVYSCG------WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
CG D T+ +T+ G++Y+ G G D +G L + + +E ++S
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE-----QVS 486
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALI-IVAVQCGCDGTF 545
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMK-------PTLIPSTLFGQHQFNPKSKVESL 293
+L G V + G + LG +S + P TL Q F K+ ++
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF---YKIRTI 602
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
G AI G L +G N+ GQLG+G + +
Sbjct: 603 APGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S ++ ++ G H +V+T N+ +++G +G+ G+ EEDY + D+
Sbjct: 479 SNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRL--GLDSEEDY----YTPQRVDVPKAL 532
Query: 127 IMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGL-----GHLNNQE-------TPCLVRG 173
I+ AV CG D T LT+SGKV +CG + GL G +N++ T +
Sbjct: 533 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 592
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRI 232
++ +I ++ A+ ++G + +G ++ GQ+ + +L G ++
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQV 652
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP 275
+ V+ G D+ +++WG G G G +M PT P
Sbjct: 653 IRVSCGDEFTIAATDDNHIFAWGNG--GNG---RLAMTPTERP 690
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 36/277 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ----EEDYQGKWFCHNIADLEGE 125
I ++ G T+ +TD + FG++ +G G V E Q +F N
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN------- 480
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ CG +H + LT + +VYS G G G+ GL + TP V + IV +
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVP-KALIIVAVQC 539
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI-------------SESEMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ + E+ +T L++ +I
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 233 VDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
E IA T+ H++ WG G+L + E
Sbjct: 659 DEFTIAA-------TDDNHIFAWGNGGNGRLAMTPTE 688
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 193 VSDKGDVFGWGNSE-----YGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
V+ + +++ W N + +GQ+ + P+ + + +G + I V+ G +
Sbjct: 384 VTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA-IHQVSCGDDFTVCVT 442
Query: 247 DEGLVYSWG---YGLLG----QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
DEG +Y++G YG +G GP+V M Q F + VE + G
Sbjct: 443 DEGQLYAFGSDYYGCMGVDKVSGPEVLEPM-----------QLNFFLSNPVEQVSCGDNH 491
Query: 300 FGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+T +Y WG +YG+LGL + ED P +V V
Sbjct: 492 VVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 132/320 (41%), Gaps = 47/320 (14%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
FGC N + LG D ++G+ ++ P V+ + ++ ++ G +HT +T++
Sbjct: 97 FGC--NDEGALG-RDTSEEGSEMQ--------PGKVE-LAEKVVQVSAGDSHTAALTEDG 144
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
F FG SF + G++ + K + ++ G DH + LT G +Y
Sbjct: 145 RVFVFG--SF-RDNNGVIGLLEPMKKSMVPVQVQIN-TPVIKIASGNDHLVLLTVDGDLY 200
Query: 148 SCGWGADGQTGL-----------GHLNNQETPCLVRGEIEGERIVKLSSAVDC----VLA 192
+ G G GQ G L P + + +G V V C A
Sbjct: 201 TSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQD-VFCGAYFTFA 259
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTM-LNDEGL 250
VS +G V+G+G S Y Q+ Q P+ L+ K ++ SGG T+ ++ EG
Sbjct: 260 VSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGK 319
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
YS G YG LG G +PT IP K+ S+ +G A++ G
Sbjct: 320 AYSLGRAEYGRLGLGENAEEQSEPTPIPDL----------PKINSVASGASVSYAVSTDG 369
Query: 308 HLYMWGKNQYGQLGLGTVED 327
++ WG QLG G ED
Sbjct: 370 CVFAWGMGTNLQLGTGEEED 389
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E I+ A G HT+ L SG +Y+ +G + + LG ++E + G++E E++V++
Sbjct: 73 EDIVQAAAGGMHTVCLGASGSIYT--FGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQV 130
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A+++ G VF +G+ G I E + V Q + + ++ +ASG
Sbjct: 131 SAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLE-PMKKSMVPVQVQINTPVIKIASGNDH 189
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKV---------SRSMKPTLIPSTLFGQHQFNPKSKVES 292
+L +G +Y+ G G GQ +V + ++ L+P + + + + + +
Sbjct: 190 LVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQD 249
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+ G A++ GH+Y +G + Y QLG
Sbjct: 250 VFCGAYFTFAVSQEGHVYGFGLSNYHQLG 278
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 33/285 (11%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I A G HT+ + + +TFG N G GR +E G +L EK++
Sbjct: 75 IVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEE----GSEMQPGKVEL-AEKVVQ 129
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGERIVKLSSAVD 188
G HT LTE G+V+ G D +G L + + V+ +I ++K++S D
Sbjct: 130 VSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQIN-TPVIKIASGND 188
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIST-------PRVL-SQC-----KGVSRI--V 233
++ ++ GD++ G E GQ+ + + R+L QC KG R+
Sbjct: 189 HLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQ 248
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DV G ++ EG VY G+GL +++ + P L + K+ +S
Sbjct: 249 DVFCGAYFTFAVSQEGHVY--GFGLSNYHQLGTKNTQACYAPQNL-----TSFKNSTKSW 301
Query: 294 I---AGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
I G + + G Y G+ +YG+LGLG E+Q P +
Sbjct: 302 IGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPI 346
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGE 178
+D++ K + V H T G+V + G G GQ GLG + ++ P LV E
Sbjct: 20 SDVKKTKALPIVTHPSHG---TVGGQVLTLGQGDVGQLGLGEDIMERKKPALV---TLTE 73
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
IV+ ++ + + G ++ +G ++ G + + + + + ++V V++G
Sbjct: 74 DIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAG 133
Query: 239 GSACTMLNDEGLVYSWGY-----GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
S L ++G V+ +G G++G + +SM P Q Q N + V +
Sbjct: 134 DSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPV--------QVQIN--TPVIKI 183
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+G +T G LY G + GQLG
Sbjct: 184 ASGNDHLVLLTVDGDLYTSGCGEQGQLG 211
Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
GQ HT+ + GK YS G G+ GLG + Q P + + +I ++S
Sbjct: 307 GQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIP---DLPKINSVASGASVSY 363
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSR-IVDVASGGSACTML 245
AVS G VF WG Q+ E + + +P ++ R ++ V+SGG +L
Sbjct: 364 AVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLL 419
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 25/292 (8%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV--QEEDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISR 383
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G L + P +V + G
Sbjct: 384 FLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALL-G 442
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI----SESE---MQISTP------RVLS 224
+V+++ VLA+S + ++F WG + G++ ES Q+ P RV+
Sbjct: 443 YEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVC 502
Query: 225 QCKGVSRIVDVASGGSAC--TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
S I+ V AC N GL + LG+ P + ++ L TL G
Sbjct: 503 GIDS-SMILTVPGQALACGSNRFNKLGL----DHLSLGEEPVPHQQVEEAL-SFTLLGSA 556
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + + S+ G A+T G Y +G NQ+GQLG T P KV
Sbjct: 557 PLD-QEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKV 607
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 42/278 (15%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNP--LELVMSFVR 58
+ I +ACG FT T D+ + + FG G S+ LG+ P +E ++ +
Sbjct: 391 VTIKHVACGDFFTACLT---DRGIIMTFGSG--SNGCLGHGSLTDISQPTIVEALLGY-- 443
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
++ +A G +H + ++ F +G G+ G G +
Sbjct: 444 ----------EMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCP-----QQ 488
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC--------- 169
+ G++ VCG D ++ LT G+ +CG + GL HL+ E P
Sbjct: 489 VPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEAL 548
Query: 170 ----LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ 225
L ++ E ++ + AV+ GD + +G++++GQ+ + + S R +
Sbjct: 549 SFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGS--RAPCK 606
Query: 226 CKGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ ++ VA G + + E VYSWG G G+
Sbjct: 607 VQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR 644
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 24/228 (10%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG + + ++ LF G +LG P + +P+P
Sbjct: 444 EMVQVACGASHVLALSTERE----LFAWGRGDSGRLGLGTRESHSCPQQ-------VPMP 492
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV---------QEEDYQGK 113
P + + + G ++++T A G+N F + G + Q+ +
Sbjct: 493 ---PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALS 549
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ A L+ E ++ G H+ +T SG Y+ G GQ G PC V+G
Sbjct: 550 FTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG 609
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
+EG ++ ++ +A+ + +V+ WG G++ + PR
Sbjct: 610 -LEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPR 656
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 28/267 (10%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + + + L G +++
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTI-----VEALLGYEMVQ 447
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG H L L+ ++++ G G G+ GLG + P V G+ ++ +D
Sbjct: 448 VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMP-PGQEAQRVVCGIDS 506
Query: 190 VLAVSDKGDVFGWGNSEYGQI--------------SESEMQISTPRVLSQCKGVSRIVDV 235
+ ++ G G++ + ++ + E +S + S ++ +
Sbjct: 507 SMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSI 566
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G + + G Y++G GQ G R + P + G K+ +
Sbjct: 567 DLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSR---APCKVQGLEGI----KMAMVA 619
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI +Y WGK G+LG
Sbjct: 620 CGDAFTVAIGAESEVYSWGKGARGRLG 646
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
+ ++ A G HT+ L++SG+VYS +G + + LG + E +V G++E E++V++
Sbjct: 67 QDVVQAEAGGMHTVCLSQSGQVYS--FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A+++ G VF WG+ G I E + V Q + + +V VASG
Sbjct: 125 SAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDAPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKV---------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML ++G +Y+ G G GQ +V + + L+P L + + +
Sbjct: 184 LVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI+ GH+Y +G + Y QLG
Sbjct: 244 DAFCGAYFTFAISREGHVYGFGLSNYHQLG 273
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 114/286 (39%), Gaps = 34/286 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ ++ G +HT +T++ F +G SF + G++ + K L+ ++
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWG--SF-RDNNGVIGLLEPMKKSMVPVQVQLDA-PVV 175
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQ--------------TGLGHLNNQETPCL-VRG 173
G DH + LT G +Y+ G G GQ GLG L L RG
Sbjct: 176 KVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRG 235
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRI 232
R A+S +G V+G+G S Y Q+ + P+ L+ K ++
Sbjct: 236 TRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKS 295
Query: 233 VDVASGGSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
SGG T+ ++ EG YS G YG LG G PTLI
Sbjct: 296 WVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV--------- 346
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V S+ G A++ G ++ WG QLG G ED P+++
Sbjct: 347 -VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 28/279 (10%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
G HT+ ++ + ++FG N G GR + +G +L+ EK++ G
Sbjct: 74 AGGMHTVCLSQSGQVYSFGCNDEGALGR----DTSVEGSEMVPGKVELQ-EKVVQVSAGD 128
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGERIVKLSSAVDCVLAV 193
HT LTE G+V+ G D +G L + + V+ +++ +VK++S D ++ +
Sbjct: 129 SHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAP-VVKVASGNDHLVML 187
Query: 194 SDKGDVFGWGNSEYGQISE-SEM-----------QISTPR-VLSQCKGVS---RIVDVAS 237
++ GD++ G E GQ+ E+ ++ PR VL + +G R D
Sbjct: 188 TNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFC 247
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
G ++ EG VY G+GL + IP L + + KS V G
Sbjct: 248 GAYFTFAISREGHVY--GFGLSNYHQLGTPGTGSCFIPQNLT-SFKNSTKSWV-GFSGGQ 303
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKVA 335
+ + G Y G+ +YG+LGLG E++ P ++
Sbjct: 304 HHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 20/197 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++ D CG FT ++ ++G GL++ QLG P L SF
Sbjct: 240 VRFQDAFCGAYFTFAISREG----HVYGFGLSNYHQLGTPGTGSCFIPQNLT-SF----- 289
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
K+ + + G+ HT+ + A++ G +G+ G G EE K I+
Sbjct: 290 --KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE----KSIPTLISR 343
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERI 180
L + CG +++ G+V++ G G + Q G G + +P + G ++E +
Sbjct: 344 LP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVV 401
Query: 181 VKLSS-AVDCVLAVSDK 196
+ +SS VL V D+
Sbjct: 402 LTVSSGGQHTVLLVKDQ 418
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E ++ A G HT+ L++SG+VYS +G + + LG + E +V G++E E++V++
Sbjct: 67 EDVVQAEAGGMHTVCLSKSGQVYS--FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A++D G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDVPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKV---------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML +G +Y+ G G GQ +V + ++ L+P + + +
Sbjct: 184 LVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI++ GH+Y +G + Y QLG
Sbjct: 244 DAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 136/336 (40%), Gaps = 48/336 (14%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
SK + FGC N + LG D +G+ E+V V + ++ ++ G +H
Sbjct: 83 SKSGQVYSFGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSH 130
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
T +TD+ F +G SF + G++ + K L+ ++ G DH +
Sbjct: 131 TAALTDDGRVFLWG--SF-RDNNGVIGLLEPMKKSMVPVQVQLD-VPVVKVASGNDHLVM 186
Query: 140 LTESGKVYSCGWGADGQTGL-----------GHLNNQETPCLVRGEIEGER-IVKLSSAV 187
LT G +Y+ G G GQ G L P V + G R V+ A
Sbjct: 187 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 188 DC----VLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
C A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG
Sbjct: 247 -CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 243 TM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
T+ ++ EG YS G YG LG G PTLI V S+ G
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL----------PAVSSVACGAS 355
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG QLG G ED P+++
Sbjct: 356 VGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 33/296 (11%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V P ++ A G HT+ ++ + ++FG N G GR + +G
Sbjct: 60 PALVSIPEDVVQAEAGG-MHTVCLSKSGQVYSFGCNDEGALGR----DTSVEGSEMVPGK 114
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIE 176
+L+ EK++ G HT LT+ G+V+ G D +G L + P V+ ++
Sbjct: 115 VELQ-EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP 173
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI------------SESEMQISTPR-VL 223
+VK++S D ++ ++ GD++ G E GQ+ + ++ P+ V+
Sbjct: 174 ---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM 230
Query: 224 SQCKGVS---RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
+ +G R D G ++ EG VY G+GL + + IP L
Sbjct: 231 LKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY--GFGLSNYHQLGTPGTESCFIPQNLT- 287
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKVA 335
+ + KS V G + + G Y G+ +YG+LGLG E++ P ++
Sbjct: 288 SFKNSTKSWV-GFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG ++ ++ P LV E +V+ + + +S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIP---EDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L D+G V+ W
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 255 GY-----GLLGQGPKVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGH 308
G G++G + +SM P Q Q + P KV S G +T G
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV--------QVQLDVPVVKVAS---GNDHLVMLTADGD 192
Query: 309 LYMWGKNQYGQLG 321
LY G + GQLG
Sbjct: 193 LYTLGCGEQGQLG 205
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSA---VD 188
GQ HT+ + GK YS G G+ GLG + P L+ R+ +SS
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLI------SRLPAVSSVACGAS 355
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR--IVDVASGGSACTML 245
AV+ G VF WG Q+ + + + V K + ++ V+SGG +L
Sbjct: 356 VGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLL 414
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
+ ++ A G HT+ L +SG+VYS +G + + LG + E +V G++E E++V++
Sbjct: 67 QDVVQAEAGGMHTVCLNQSGQVYS--FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A+++ G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDMPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKV---------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML +G +Y+ G G GQ +V + ++ L+P L + + +
Sbjct: 184 LVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI+ GH+Y +G + Y QLG
Sbjct: 244 DAFCGAYLTFAISREGHVYGFGLSNYHQLG 273
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 34/286 (11%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ ++ G +HT +T++ F +G SF + G++ + K L+ ++
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWG--SF-RDNNGVIGLLEPMKKSMVPVQVQLD-MPVV 175
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-----------GHLNNQETPCLVRGEIEG 177
G DH + LT G +Y+ G G GQ G L P V + G
Sbjct: 176 KVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRG 235
Query: 178 ER-IVKLSSA---VDCVLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRI 232
R V+ A A+S +G V+G+G S Y Q+ + P+ L+ K ++
Sbjct: 236 SRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKS 295
Query: 233 VDVASGGSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
SGG T+ ++ EG YS G YG LG G PTLI
Sbjct: 296 WVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV--------- 346
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V S+ G A++ G ++ WG QLG G ED P+++
Sbjct: 347 -VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 32/281 (11%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
G HT+ + + ++FG N G GR + +G +L+ EK++ G
Sbjct: 74 AGGMHTVCLNQSGQVYSFGCNDEGALGR----DTSVEGSEMVPGKVELQ-EKVVQVSAGD 128
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIEGERIVKLSSAVDCVL 191
HT LTE G+V+ G D +G L + P V+ ++ +VK++S D ++
Sbjct: 129 SHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMP---VVKVASGNDHLV 185
Query: 192 AVSDKGDVFGWGNSEYGQI------------SESEMQISTPR-VLSQCKGVS---RIVDV 235
++ GD++ G E GQ+ + ++ P+ VL + +G R D
Sbjct: 186 MLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDA 245
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G ++ EG VY G+GL + IP L + + KS V
Sbjct: 246 FCGAYLTFAISREGHVY--GFGLSNYHQLGTPGTASCFIPQNLT-SFKNSTKSWV-GFSG 301
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKVA 335
G + + G Y G+ +YG+LGLG E++ P ++
Sbjct: 302 GQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 20/197 (10%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
++ D CG T ++ ++G GL++ QLG P L SF
Sbjct: 240 VRFQDAFCGAYLTFAISREG----HVYGFGLSNYHQLGTPGTASCFIPQNLT-SF----- 289
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
K+ + + G+ HTI + A++ G +G+ G G EE K I+
Sbjct: 290 --KNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEE----KSIPTLISR 343
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERI 180
L + CG +++ G+V++ G G + Q G G + +P + G ++E +
Sbjct: 344 LP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVV 401
Query: 181 VKLSS-AVDCVLAVSDK 196
+ +SS VL V DK
Sbjct: 402 LTVSSGGQHTVLLVKDK 418
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSA---VD 188
GQ HT+ + GK YS G G+ GLG + P L+ R+ +SS
Sbjct: 302 GQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLI------SRLPVVSSVACGAS 355
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV-DVASGGSACTML 245
AVS G VF WG Q+ + + + +P ++ + +R+V V+SGG +L
Sbjct: 356 VGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 31/313 (9%)
Query: 45 KKGNPLELVMSF-----VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQ 99
K +PL L + + PL + +T++ ++ GR + +T + T+ S G
Sbjct: 312 KMMHPLPLFSVYTWGSGISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS 371
Query: 100 CGRGIV--QEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT 157
G + E Q ++ + G I CG T LT+ G + + G G++G
Sbjct: 372 -GEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCL 430
Query: 158 GLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI 217
G G+ N+ P +V + G +V++S VLAV+++ +VF WG + G++ +
Sbjct: 431 GHGNFNDVTQPKIVEA-LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLG-----L 484
Query: 218 STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG---------PKVSRS 268
+T + + VS D + C + D ++ S + +L G KVS +
Sbjct: 485 ATQDSHNCPQQVSLPADFEAQRVLCGV--DCSMIMSTQHQILACGNNRFNKLGLDKVSGT 542
Query: 269 MKPTLIPST----LFGQHQFNP--KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+P+ LF Q P K+ + G A+T G + +G NQ+GQLG
Sbjct: 543 EEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGC 602
Query: 323 GTVEDQPFPLKVA 335
P +V+
Sbjct: 603 SHRRSSRVPYQVS 615
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 34/269 (12%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK ++ G T +TD TFG+ S G G G ++ + L G +++
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHG-----NFNDVTQPKIVEALLGYELVQ 454
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAV 187
CG H L +T +V+S G G +G+ GL ++ P V + E +R++ V
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVL---CGV 511
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-------------SRIV 233
DC + +S + + GN+ + ++ ++ P Q + V +IV
Sbjct: 512 DCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIV 571
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+ G + + ++G +++G GQ G RS + +P +Q + +
Sbjct: 572 YIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSR---VP------YQVSGLQGITM 622
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI G +Y WGK G+LG
Sbjct: 623 AACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 28/229 (12%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ ++CG + T ++ +F G + +LG P + + LP
Sbjct: 451 ELVQVSCGASHVLAVTNERE----VFSWGRGDNGRLGLATQDSHNCPQQ-------VSLP 499
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH----- 117
+ ++ G +++++ GNN F + G V + + FC
Sbjct: 500 ADFEAQRV---LCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTE-EPSSFCQVEEVH 555
Query: 118 -----NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
A L EKI+ G H++ +TE G+ ++ G GQ G H + P V
Sbjct: 556 LFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVS 615
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
G ++G + A LA+ +G+V+ WG G++ E P+
Sbjct: 616 G-LQGITMAACGDAF--TLAIGAEGEVYTWGKGARGRLGRKEEDFGIPK 661
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 221 RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPST 277
R L GV+ I V+ G T L D G++ ++G G LG G + +P ++ +
Sbjct: 390 RFLEGQSGVT-IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHG-NFNDVTQPKIVEAL 447
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
L ++ + G A+TN ++ WG+ G+LGL T + P +V++
Sbjct: 448 L--------GYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSL 498
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 29/222 (13%)
Query: 100 CGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
C R V E FC +A ++ G +H L L +G+V+S G G GQ G
Sbjct: 142 CARAYVTPEPP----FCQPLAP--ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGH 195
Query: 160 GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST 219
G L + P L+ ++G R+ K+++ + +S+ GD++ WG +E GQ++
Sbjct: 196 GTLEAELEPRLLEA-LQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLA-------- 246
Query: 220 PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF 279
L G + T LN++GL G P +++P P+ L
Sbjct: 247 ---LPTRSGTENKAEREEA----TELNEDGLKEELAVADAG-APAHFIAIQP--FPALL- 295
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
S G +T G LY WG +YGQLG
Sbjct: 296 ---DLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLG 334
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +++ L G H +++ F++G GQ G G ++ E + L+G
Sbjct: 159 PELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEP-----RLLEALQGL 213
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G H++ L+E+G +Y GW GQ L + E + E E +L+
Sbjct: 214 RMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEN------KAEREEATELNE 267
Query: 186 -AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ LAV+D G + + I P +L G S V + G +
Sbjct: 268 DGLKEELAVADAG-----APAHFIAIQ------PFPALLDLPLG-SDAVMASCGSRHTAV 315
Query: 245 LNDEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ G +Y+WG+G GQ G K S S+ +P + F + Q +V ++ GP
Sbjct: 316 VTRTGELYTWGWGKYGQLGHKDSTSLDRPCCV--EYFVERQL----EVRAVTCGP 364
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
R+ + G +L G V+SWG +G LG G + ++P L+ L G
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELEPRLL-EALQGL------ 213
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
++ + AG ++ G +Y+WG N+ GQL L T
Sbjct: 214 -RMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPT 249
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 113/289 (39%), Gaps = 28/289 (9%)
Query: 62 PVKHPSTQIKHLATG-RAHTIVITDNEGAFTFGNN---SFG--QCGRGIVQEEDYQGKWF 115
P K P LA G + + TDN F N ++G +C GI+ YQ K
Sbjct: 150 PAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGF--YQDKIK 207
Query: 116 CHN----IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ I+ G+DH LFL E G V++ G G Q G + L
Sbjct: 208 IQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLD 267
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-----MQISTPRVLSQC 226
+ ++S + A++ + WG +++GQ SE ++ P+ L+
Sbjct: 268 PRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALP 327
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWG-YGLLGQGPKVSRSMKPTLIPSTLFGQHQ-- 283
V I +A+G +L+ +G +YS G + G + + P + G+ +
Sbjct: 328 DNVV-IRSIAAGEHHSLILSQDGDLYSCGRLDMFEVG--IPKDNLPEYTYKDVHGKARAV 384
Query: 284 -----FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED 327
N K +S+ AG A+ G Y WG + +GLG ED
Sbjct: 385 PLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFED 433
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 30/223 (13%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG-----------------------I 104
+I A G HT+ + + +++G N G GR +
Sbjct: 84 AKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDL 143
Query: 105 VQEEDYQGKWFCHNIADL-EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN 163
+ E K + L EG K++ + + L +G+VY+ G + LG
Sbjct: 144 NELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQ 203
Query: 164 N----QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST 219
+ Q+TP V IV+L+ D +L + ++G VF WGN + Q+ M+
Sbjct: 204 DKIKIQKTPWKV-PTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFR 262
Query: 220 PRVLS-QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ L + G+ + +ASG + C L + + SWG GQ
Sbjct: 263 LKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQ 305
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 55/231 (23%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC--H 117
P ++H +K++A+G H +T + ++G N FGQCG V E+ G
Sbjct: 270 PFGLRH----VKYIASGENHCFALTKDNKLVSWGLNQFGQCG---VSEDVEDGALVTKPK 322
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+A + I G+ H+L L++ G +YSCG + G+ N P ++ G
Sbjct: 323 RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDN---LPEYTYKDVHG 379
Query: 178 E-RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
+ R V L + ++ V + VA
Sbjct: 380 KARAVPLPTKLN---------------------------------------NVPKFKSVA 400
Query: 237 SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQF 284
+G + G+ YSWG+G +G GP + PT I +T H
Sbjct: 401 AGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNI 451
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H L L +G+V+S G G GQ G G L + P L+ ++G + ++++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGGWHSVC 224
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
VS+ GD++ WG +E GQ++ + T + + V+R T LN++G
Sbjct: 225 VSETGDIYIWGWNESGQLA-----LPTRNLAEDGETVAR---------EATELNEDGSQV 270
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
G P +++P P+ L S G +T G LY W
Sbjct: 271 KRTGGAEDGAPAPFIAVQP--FPALL----DLPMGSDAVKASCGSRHTAVVTRTGELYTW 324
Query: 313 GKNQYGQLG 321
G +YGQLG
Sbjct: 325 GWGKYGQLG 333
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 20/196 (10%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + + L G H +++ F++G GQ G G ++ E + L+G
Sbjct: 156 PELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEP-----RLLEALQGL 210
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ + G H++ ++E+G +Y GW GQ L N E +GE + + ++
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAE---------DGETVAREAT 261
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
++ D V G +E G + P +L G S V + G ++
Sbjct: 262 ELN-----EDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMG-SDAVKASCGSRHTAVV 315
Query: 246 NDEGLVYSWGYGLLGQ 261
G +Y+WG+G GQ
Sbjct: 316 TRTGELYTWGWGKYGQ 331
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G + A CG HT +T +G++Y+ GWG GQ G + + P V ++ + VK
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVK- 357
Query: 184 SSAVDC 189
AV C
Sbjct: 358 --AVTC 361
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 22/102 (21%)
Query: 231 RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
R + G +L+ G V+SWG +G LG G + ++P L+
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLL------------- 204
Query: 288 SKVESLIAGPCTFGA-----ITNFGHLYMWGKNQYGQLGLGT 324
++ L+ G ++ G +Y+WG N+ GQL L T
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPT 246
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H L L +G+V+S G G GQ G G L + P L+ ++G + ++++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-LQGLTMAEVAAGGWHSVC 224
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
VS+ GD++ WG +E GQ++ + T + + V+R T LN++G
Sbjct: 225 VSETGDIYIWGWNESGQLA-----LPTRNLAEDGETVAR---------EATGLNEDGSQV 270
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
+ P +++P P+ L S + G +T G LY W
Sbjct: 271 KRTGRVEDGAPAPFIAVQP--FPALL----DLPLGSDAVKVSCGSRHTAVVTRTGELYTW 324
Query: 313 GKNQYGQLGLGTVEDQPFPLKV 334
G +YGQLG +P +V
Sbjct: 325 GWGKYGQLGHEDTTSLDWPRRV 346
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 20/196 (10%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + + L G H +++ F++G GQ G G ++ E + L+G
Sbjct: 156 PELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEP-----RLLEALQGL 210
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ + G H++ ++E+G +Y GW GQ L N E +GE + + ++
Sbjct: 211 TMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAE---------DGETVAREAT 261
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
++ D V G E G + P +L G S V V+ G ++
Sbjct: 262 GLN-----EDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLG-SDAVKVSCGSRHTAVV 315
Query: 246 NDEGLVYSWGYGLLGQ 261
G +Y+WG+G GQ
Sbjct: 316 TRTGELYTWGWGKYGQ 331
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G + CG HT +T +G++Y+ GWG GQ G + + P V ++ + VK
Sbjct: 299 GSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVK- 357
Query: 184 SSAVDC 189
AV C
Sbjct: 358 --AVTC 361
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ GLN+ QL + KG L P+K I+H+A G+ HT+++T +
Sbjct: 263 IWATGLNNFKQLAHE---TKGKEFALT--------PIKTELKDIRHIAGGQHHTVILTTD 311
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
G +G+ G G V++ + I EKI+ CG+ + +T GK+
Sbjct: 312 LKCSVVGRPEYGRLGLGDVKDVVEK-----PTIVKKLTEKIVSVGCGEVCSYAVTIDGKL 366
Query: 147 YSCGWGADGQTGLGHLNNQETPCLV 171
YS G G + Q G+G +++ P +V
Sbjct: 367 YSWGSGVNNQLGVGDGDDELEPIVV 391
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 141/353 (39%), Gaps = 63/353 (17%)
Query: 6 DIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
DI+ G +V TKS D + FGC N + LG D + G+ + + I LP K
Sbjct: 78 DISAGGMHNLVLTKSGD--IYSFGC--NDEGALG-RDTSEDGSESKPDL----IDLPGKA 128
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGN--NSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ G +H+ + ++ F +G+ +S G G I + I +E
Sbjct: 129 LC-----ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP-------IDLME 176
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGER--- 179
G G DH + LT +GKV++ G GQ LG L+ + + GE G+R
Sbjct: 177 GTVCCSIASGADHLVILTTAGKVFTVGCAEQGQ--LGRLSERS----ISGEGRRGKRDLL 230
Query: 180 -----IVKLSSAVDCVLAV--------SDKGDVFGWGNSEYGQISESE--MQISTPRVLS 224
I+ + + + A S ++ G + + Q++ + + + +
Sbjct: 231 RPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT 290
Query: 225 QCKGVSRIVDVASGGSACTMLNDE---GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ 281
+ K + I A G +L + +V YG LG G KPT++
Sbjct: 291 ELKDIRHI---AGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT--- 344
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K+ S+ G A+T G LY WG QLG+G +D+ P+ V
Sbjct: 345 ------EKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV 391
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 509 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHSLA 567
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ SE + PR LS+ S + VA+G L D
Sbjct: 568 LTAKSQVYSWGSNTFGQLGHSEFPTTVPR-LSKVSSESGVWSVAAGHGYSLFLVDTEDFQ 626
Query: 249 -GLVYS 253
GL YS
Sbjct: 627 PGLYYS 632
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG H+ +T++ + +G N+ GQC V + Y + +I+D E +I
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENAAGQCA---VANQQYVSEPSPVSISDSETSPLLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSISREIWA--WGTGCQLGL 182
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCG---WGADGQTGLGHLNNQETPCLVRGEIEGERI 180
G+ ++ A G H + LTE G+VYS G W ++ + L+ + G +
Sbjct: 40 GKTVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEIC------PSSPLLESALVGHHV 93
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS------RIV 233
V +++ AV++ G V+ WG + GQ + + Q +S P +S + RI+
Sbjct: 94 VTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRIL 153
Query: 234 DVASGGSACTMLNDEGLVYSWGYG 257
+A G L+ +++WG G
Sbjct: 154 QLACGEEHTLALSISREIWAWGTG 177
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 471 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 529
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GGS L + VYSWG GQ +
Sbjct: 530 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ---LG 586
Query: 267 RSMKPTLIP 275
S PT +P
Sbjct: 587 HSEFPTTVP 595
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
++ A G +L ++G VYS+G L + L+ S L G H V
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFG-TLPWKSEAAEICPSSPLLESALVGHH-------VV 94
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE--DQPFPLKVA 335
++ G GA+T G +YMWG+N GQ + + +P P+ ++
Sbjct: 95 TVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSIS 140
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK-I 127
++ HL G +H++ +T +++G+N+FGQ G + ++ + E +
Sbjct: 554 EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHS-------EFPTTVPRLSKVSSESGV 606
Query: 128 MDAVCGQDHTLFLTES-----GKVYSCGWG-ADGQTGLGHLNNQETPCLVRGEIEGERIV 181
G ++LFL ++ G YS A+G T + + TP L+ G I
Sbjct: 607 WSVAAGHGYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSKLG-YIS 665
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSE----------YGQISESEMQISTPRV----LSQCK 227
++++ D LA+ DK ++ G+ S Y ++SE + QI P + L
Sbjct: 666 RVTAGKDSYLALVDK-NIMGYIASLHELATTERRFYSKLSEIKSQILRPLLSLEHLGTVT 724
Query: 228 GVSRIVDVASGGSA-CTMLNDEG 249
V + +VAS S C ++ G
Sbjct: 725 TVQLLQEVASRFSKLCYLIGQHG 747
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,711,717
Number of Sequences: 539616
Number of extensions: 5876233
Number of successful extensions: 13651
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 12338
Number of HSP's gapped (non-prelim): 471
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)