Your job contains 1 sequence.
>psy5892
MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP
LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA
DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI
VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS
ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF
GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5892
(340 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1307558 - symbol:Wbscr16 "Williams-Beuren syndrome ch... 879 5.3e-88 1
MGI|MGI:2137600 - symbol:Wbscr16 "Williams-Beuren syndrom... 869 6.0e-87 1
UNIPROTKB|E1BIS5 - symbol:WBSCR16 "Uncharacterized protei... 856 1.4e-85 1
UNIPROTKB|F1RJL0 - symbol:WBSCR16 "Uncharacterized protei... 846 1.7e-84 1
UNIPROTKB|Q96I51 - symbol:WBSCR16 "Williams-Beuren syndro... 844 2.7e-84 1
UNIPROTKB|F1Q1C6 - symbol:WBSCR16 "Uncharacterized protei... 827 1.7e-82 1
UNIPROTKB|F1P3N0 - symbol:WBSCR16 "Uncharacterized protei... 811 8.5e-81 1
WB|WBGene00012370 - symbol:W09G3.7 species:6239 "Caenorha... 434 7.5e-41 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 313 1.9e-27 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 306 1.1e-26 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 300 1.2e-26 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 296 1.2e-25 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 255 6.5e-25 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 255 6.6e-25 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 255 1.2e-24 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 255 1.2e-24 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 258 1.2e-24 3
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 280 7.1e-24 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 279 9.2e-24 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 277 1.8e-23 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 276 2.0e-23 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 254 2.7e-23 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 254 2.8e-23 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 276 4.3e-23 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 277 6.6e-23 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 262 1.3e-22 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 267 1.9e-22 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 266 2.4e-22 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 266 2.4e-22 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 271 2.9e-22 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 271 2.9e-22 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 271 2.9e-22 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 271 2.9e-22 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 271 2.9e-22 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 259 3.3e-22 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 270 3.7e-22 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 270 3.7e-22 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 269 4.8e-22 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 268 5.6e-22 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 266 1.0e-21 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 253 1.8e-21 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 248 4.1e-21 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 260 4.3e-21 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 254 7.0e-21 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 256 7.0e-21 2
CGD|CAL0001436 - symbol:ATS1 species:5476 "Candida albica... 245 8.0e-21 1
UNIPROTKB|Q5A364 - symbol:ATS1 "Putative uncharacterized ... 245 8.0e-21 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 258 1.6e-20 2
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 257 1.7e-20 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 254 1.8e-20 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 258 2.3e-20 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 258 2.3e-20 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 258 2.3e-20 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 251 4.0e-20 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 252 7.7e-20 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 252 7.7e-20 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 255 9.5e-20 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 247 9.6e-20 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 249 1.3e-19 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 249 1.3e-19 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 240 1.4e-19 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 248 2.0e-19 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 251 2.5e-19 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 239 5.0e-19 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 247 5.4e-19 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 246 7.8e-19 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 246 7.8e-19 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 246 8.1e-19 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 240 1.4e-18 1
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 239 1.7e-18 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 244 2.0e-18 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 239 2.2e-18 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 239 2.3e-18 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 243 4.3e-18 1
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 183 6.9e-18 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 233 7.6e-18 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 238 1.5e-17 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 181 1.1e-16 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 228 3.2e-16 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 227 4.4e-16 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 226 5.9e-16 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 226 5.9e-16 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 174 9.8e-16 2
UNIPROTKB|F1NXI5 - symbol:SERGEF "Uncharacterized protein... 216 1.2e-15 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 223 1.5e-15 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 223 1.7e-15 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 222 1.8e-15 1
UNIPROTKB|Q83CB0 - symbol:CBU_1217 "Hypothetical membrane... 217 2.0e-15 1
TIGR_CMR|CBU_1217 - symbol:CBU_1217 "hypothetical protein... 217 2.0e-15 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 221 2.4e-15 1
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 220 7.9e-15 1
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 220 7.9e-15 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 216 1.0e-14 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 206 3.0e-14 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 211 3.6e-14 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 209 6.0e-14 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 209 6.2e-14 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 204 8.6e-14 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 207 1.1e-13 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 207 1.1e-13 1
WARNING: Descriptions of 116 database sequences were not reported due to the
limiting value of parameter V = 100.
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 166/341 (48%), Positives = 232/341 (68%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 105 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 163
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNN+ GQCGR +V++E Y H +
Sbjct: 164 PLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D EG+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 224 DFEGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LA+S G VFGWGNSEY Q++ Q++ PR L GV ++ VA G
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG 341
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN+EG V+ WGYG+LG+GP +S + P +IP TLFG +FNP+ KV + G
Sbjct: 342 GTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLS 401
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 402 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 165/341 (48%), Positives = 231/341 (67%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 105 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 163
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS GQCGR +V++E Y H +
Sbjct: 164 PLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 224 DFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LA+S G VFGWGNSEY Q++ Q++ PR L GV ++ VA G
Sbjct: 283 VQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG 341
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GPK+ + P +IP TLFG +FNP+ +V + G
Sbjct: 342 GTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLS 401
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 402 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 162/341 (47%), Positives = 227/341 (66%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 108 KISSAACGYGFTLLSSKTKDIT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 166
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N TP + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 VQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 159/341 (46%), Positives = 226/341 (66%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K++D K++G GLN DSQLG+H RK K E V+ +PL
Sbjct: 114 KISSAACGYGFTLLSSKTRDVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPL 172
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P TQ+ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 173 PLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQ 232
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N P + G++ G +
Sbjct: 233 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNV 291
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 292 VQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG 350
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG + NP+ +V + G
Sbjct: 351 GTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLS 410
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 411 HFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 451
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 159/341 (46%), Positives = 226/341 (66%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+ D K++G GLN DSQLG+H RK K E V+ + L
Sbjct: 108 KISSAACGYGFTLLSSKTADVT-KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSL 166
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++V+TD EG F+ GNNS+GQCGR +V+ E Y H +
Sbjct: 167 PLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ CGQDH+LFLT+ G+VYSCGWGADGQTGLGH N +P + G++ G +
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNV 285
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
+++++ DC LAVS G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 286 IQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACG 344
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + S P +IP TLFG +FNP+ +V + G
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 156/341 (45%), Positives = 226/341 (66%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK-KGNPLELVMSFVRIPL 61
KI+ ACGYGFT++++K+KD K++G GLN DSQLG+H K K E V+ +PL
Sbjct: 109 KISSAACGYGFTLLSSKTKDVT-KVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPL 167
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+ P T++ ++ GRAH++++TD EG F+ GNN++GQCGR +V+ E Y + +
Sbjct: 168 PLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQ 227
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D +G+ ++ VCGQDH+LFLT+ G+VYSCGWGADGQTGLGH + P + G++ G +
Sbjct: 228 DFDGQ-VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNV 286
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQCKGVSRIVDVASG 238
V++++ DC LAVS +G +FGWGNSEY Q++ Q++ PR L GV ++ A G
Sbjct: 287 VQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQAACG 345
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ C +LN EG V+ WGYG+LG+GP + + P +IP TLFG +FNP V + G
Sbjct: 346 GTGCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLS 405
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+T+ G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 406 HFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 446
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 159/341 (46%), Positives = 227/341 (66%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP-RKKGNPLELVMSFVRIPL 61
KIT ACGYGFT++++ + D K++G GLN DSQLG+ R + E V+ IPL
Sbjct: 99 KITSAACGYGFTLLSSNTTDIT-KVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPL 157
Query: 62 PVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P++ P T++ ++ GRAH++V+TD+EG FT GNNS+GQCGR +V++E Y H +
Sbjct: 158 PLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLN 217
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D + +++ VCGQDH+LF T+ G V++CGWGADGQTGLGH N P + G+I G I
Sbjct: 218 DFDS-RVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNI 276
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQI-SESEM-QISTPRVLSQCKGVSRIVDVASG 238
V++SS DC LAVSD+GD+FGWGNSEY Q+ S +E Q++ PR L K + +I + A G
Sbjct: 277 VQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLP-FK-IGKIKEAACG 334
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G+ +L +EG V+ WGYG+LG+GP ++ + P +IP +LFG F+ +V + G
Sbjct: 335 GTGNIVLTEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLS 394
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
F A+TN G L++WGKN G LG+G +EDQ FP +V + G+
Sbjct: 395 HFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGE 435
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 112/337 (33%), Positives = 174/337 (51%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+ G+GF++ A+K++ L+G G+N+ Q+G + N + + + P
Sbjct: 71 ISSGFGFSLFASKNR-----LYGAGINNRFQIG----GQLTN-INKYQDYYISAKKINIP 120
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--- 123
+I +++GRAH+++ T N G F G+N+FGQCGR + DY + L
Sbjct: 121 GDEILEISSGRAHSLIRT-NLGVFAIGDNNFGQCGRN-PENMDYVVGSEESPLLPLSFPT 178
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
E I+ C D + + SG V+S G DGQ G Q P VRG++EG +I K+
Sbjct: 179 SEPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKV 238
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISES--EMQISTPRVLSQCKGVSRIVDVASGGSA 241
S + D +LA S+ G++F WG +EYGQ + + E+Q++T R ++ G I+ V S S+
Sbjct: 239 SGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGP--IICVDSTQSS 296
Query: 242 CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
N G V+ WG G+LG GP+ PT + LF V S+ AG
Sbjct: 297 VVARNSRGNVFVWGVGVLGMGPEAESLKTPTQMDQPLFDGKM------VTSVSAGNSCMS 350
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
AI G L++WG+N+Y LGLG + Q FP ++ + G
Sbjct: 351 AINEDGRLFIWGENRYSSLGLGHQKRQLFPYQLFLPG 387
Score = 187 (70.9 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 77/315 (24%), Positives = 142/315 (45%)
Query: 21 KDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAH 79
K+ + ++GCGL++ L P+ N ++ R P + + +T+ IK +++G
Sbjct: 20 KNVDCAVYGCGLSASGALAI--PKLVANSDDVTAGEARFPKRIAYFNTKSIKFISSGFGF 77
Query: 80 TIVITDNEGAFTFG-NNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
++ + N + G NN F Q G + YQ + ++ G++I++ G+ H+L
Sbjct: 78 SLFASKNR-LYGAGINNRF-QIGGQLTNINKYQDYYISAKKINIPGDEILEISSGRAHSL 135
Query: 139 FLTESGKVYSCGWGADGQTGLGHLN------NQETPCLVRGEIEGERIVKLSSAVDCVLA 192
T G V++ G GQ G N ++E+P L E I+ + ++D
Sbjct: 136 IRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIISIHCSMDTSFV 194
Query: 193 VSDKGDVFGWGNSEYGQISESE--MQISTPRVLSQCKGVSRIVDVASGGSACTML--NDE 248
V G VF +G +E GQ +Q +V +G S+I V+ GS T+L ++
Sbjct: 195 VDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEG-SKIQKVS--GSTDTLLACSEN 251
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G ++ WG GQ + ++ L S +H N + + + + A + G+
Sbjct: 252 GEIFIWGQTEYGQAAGATDEIQ--LNTS----RHVANSLGPIICVDSTQSSVVARNSRGN 305
Query: 309 LYMWGKNQYGQLGLG 323
+++WG G LG+G
Sbjct: 306 VFVWG---VGVLGMG 317
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 313 (115.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 86/254 (33%), Positives = 131/254 (51%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ EG FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH----GLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + +V ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
C +AV D G+V+ WG + GQ+ S Q TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PTPCRVAALQGI-RVQRVACGYAHTLVL 272
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTF 300
DEG VY+WG YG LG G K ++S PT P T+ K ++ + A T
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSY-PT--PVTV-------EKDRIIEIAACHSTHTS 322
Query: 301 GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 323 AAKTQGGHVYMWGQ 336
Score = 264 (98.0 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 74/255 (29%), Positives = 113/255 (44%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTE 142
T N+ F G N G G G D Q + L G+KI G H + T
Sbjct: 62 TVNDEIFVLGTNCCGCLGLG-----DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT 116
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+V++ G A Q G G N+ PC + + +++++++ L ++ G+VF W
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G + GQ+ S S + PR ++ C +V +A G C + D G VY WGY GQ
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+ +PT P + +V+ + G +T+ G +Y WG N YGQLG
Sbjct: 237 LGLGNSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
Query: 322 LGTVEDQPFPLKVAV 336
G +Q +P V V
Sbjct: 291 TGNKSNQSYPTPVTV 305
Score = 223 (83.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 70/232 (30%), Positives = 111/232 (47%)
Query: 112 GKWFCHNIADLEGEKIMDAVC--GQ--DHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C G + L+ T + +++ G G GLG + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA ++ G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+KV IA G A+ + G +Y+WG N GQLGLG +QP P +VA
Sbjct: 204 ---NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 306 (112.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 81/253 (32%), Positives = 129/253 (50%)
Query: 69 QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+I L+ G IV+ +G FT+G+N++ Q G G G CH +L +++
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNH----GLVPCHISTNLSNKQV 154
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H+L LT G+V++ G+ GQ G G NQ P V G ++ + ++ ++
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
C +AV D G+V+ WG + GQ+ S TP ++ +G+ R+ VA G + +L
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLT 273
Query: 247 DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFG 301
DEG +Y+WG YG LG G K ++S PT P + K ++ + A T
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSY-PT--PVVV-------EKDRIIEIAACHSAHTSA 323
Query: 302 AITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 258 (95.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 75/256 (29%), Positives = 115/256 (44%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTE 142
T N+ F G N G G G D Q + L G+KI G H + T
Sbjct: 62 TVNDEIFVLGTNCSGCLGVG-----DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT 116
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G+V++ G A Q G G N+ PC + + +++++++ L ++ G+VF W
Sbjct: 117 DGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 203 GNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWGYGLLG 260
G + GQ+ S S PR ++ C ++++A G C+M + D G VY WGY G
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACG-QMCSMAVVDTGEVYVWGYNGNG 235
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
Q S +PT P + +V+ + G +T+ G +Y WG N YGQL
Sbjct: 236 QLGLGSSGNQPT--PCRVAALQGI----RVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 289
Query: 321 GLGTVEDQPFPLKVAV 336
G G +Q +P V V
Sbjct: 290 GTGNKSNQSYPTPVVV 305
Score = 234 (87.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 67/231 (29%), Positives = 111/231 (48%)
Query: 112 GKWFCHNIADLEGEKIMDAVC--GQ--DHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW ++ E +++ C G + L+ T + +++ G G G+G + +
Sbjct: 29 GKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE 88
Query: 168 PCLVRGEIEGERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
P + + G++I LS S VLA +D G+VF WG++ Y Q+ P +S
Sbjct: 89 PRRL-DSLTGKKIASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
++++VA G +L +G V++WGY GQ S + +P IP + G Q
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP--IPRRVTGCLQ- 203
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V ++ G A+ + G +Y+WG N GQLGLG+ +QP P +VA
Sbjct: 204 --NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 82/277 (29%), Positives = 143/277 (51%)
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
V P ++ ++ G +H++ + + ++G GQ G G ED ++ L
Sbjct: 10 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG--DAEDRPSPT---QLSAL 64
Query: 123 EGEKIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+G +I+ CG DHT+ ++SG +VYS GWG G+ G G+ ++ TP ++ + G RI
Sbjct: 65 DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGIRIK 123
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGS 240
+++ LAV+ +G+V WG ++ GQ+ + + S P+ + +G+ RI VA+G
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAE 182
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ ++G +Y WG YG LG G + R + P + ST G+ K+ + G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDR-LVPERVTST-GGE-------KMSMVACGW 233
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+++ G LY +G ++YGQLG G +ED P K+
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 81/276 (29%), Positives = 127/276 (46%)
Query: 60 PLPVK--HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
PLP+K H +IK +A G +H + +T ++G N GQ G G D +
Sbjct: 111 PLPIKALH-GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQ 164
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
I EG +I G +HT +TE G +Y GWG G GLG ++ P V G
Sbjct: 165 KIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GG 223
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVA 236
E++ ++ ++VS G ++ +G S+YGQ+ +++ P L + +
Sbjct: 224 EKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS--NSFISQI 281
Query: 237 SGGSACTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
SGG TM L +G +Y WG+ GQ V ++ S + Q +F KV +
Sbjct: 282 SGGWRHTMALTSDGKLYGWGWNKFGQ-VGVGNNLDQC---SPV--QVRFPDDQKVVQVSC 335
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
G A+T +++ WG+ GQLG+G D+ FP
Sbjct: 336 GWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 253 (94.1 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 80/272 (29%), Positives = 128/272 (47%)
Query: 69 QIKHLATGRAHTIVITDNE-GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
QI + G HT+ + + +++G FG+ G G D + I L G +I
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG--NSSDL---FTPLPIKALHGIRI 122
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG H L +T G+V S G +GQ GLG + P ++ EG RI +++
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGA 181
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTML 245
+ AV++ GD++GWG YG + + ++ RV S G ++ VA G +
Sbjct: 182 EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST--GGEKMSMVACGWRHTISV 239
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ G +Y++G YG LG G ++ LIP L + S + + G A
Sbjct: 240 SYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKL----EALSNSFISQISGGWRHTMA 290
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ G LY WG N++GQ+G+G DQ P++V
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQV 322
Score = 243 (90.6 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 68/221 (30%), Positives = 108/221 (48%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
K++ G H++ L V S G G DGQ G G ++ +P + ++G +IV ++
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVTC 74
Query: 186 AVDCVLAVSDKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
D +A S G +V+ WG ++G++ + + TP + G+ RI +A G S C
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133
Query: 244 MLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+ EG V SWG G LG G + +L+P + Q +++ + AG
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLG-----DTEDSLVPQKI----QAFEGIRIKMVAAGAEHT 184
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
A+T G LY WG +YG LGLG D+ P +V + GG+K
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Score = 207 (77.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 63/247 (25%), Positives = 107/247 (43%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N + QLG D P + + +F I +IK +A G HT +T++ +
Sbjct: 145 GRNQNGQLGLGDTEDSLVP-QKIQAFEGI---------RIKMVAAGAEHTAAVTEDGDLY 194
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G +G G G D + + GEK+ CG HT+ ++ SG +Y+ G
Sbjct: 195 GWGWGRYGNLGLG-----DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYG 249
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
W GQ G G L + P + + I ++S +A++ G ++GWG +++GQ+
Sbjct: 250 WSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV 308
Query: 211 SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ---GPKVSR 267
V + ++V V+ G + + V++WG G GQ G V R
Sbjct: 309 GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR 368
Query: 268 SMKPTLI 274
+ P +I
Sbjct: 369 NF-PKII 374
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 68/238 (28%), Positives = 108/238 (45%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE-GA 89
G D QLG+ D + +P +L S + H QI + G HT+ + +
Sbjct: 40 GRGEDGQLGHGDAEDRPSPTQL--SALD-----GH---QIVSVTCGADHTVAYSQSGMEV 89
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+++G FG+ G G D + I L G +I CG H L +T G+V S
Sbjct: 90 YSWGWGDFGRLGHG--NSSDL---FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSW 144
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G +GQ GLG + P ++ EG RI +++ + AV++ GD++GWG YG
Sbjct: 145 GRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 210 ISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
+ + ++ RV S G ++ VA G ++ G +Y++G YG LG G
Sbjct: 204 LGLGDRTDRLVPERVTST--GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Score = 194 (73.4 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G HTI ++ + +T+G + +GQ G G D + H + L I
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHG-----DLEDHLIPHKLEALSNSFISQISG 283
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G HT+ LT GK+Y GW GQ G+G+ +Q +P VR + +++V++S LA
Sbjct: 284 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP-DDQKVVQVSCGWRHTLA 342
Query: 193 VSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASG 238
V+++ +VF WG GQ+ E + + P+++ + +S VD ASG
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVDRNFPKII---EALS--VDGASG 384
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 85/258 (32%), Positives = 123/258 (47%)
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLF 139
I IT ++ + G N G G Q K C L G+K++ G H L
Sbjct: 35 IYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC-----LSGKKLISLSYGSGPHVLL 89
Query: 140 LTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
+TE G++Y+ WG +G Q G G N +P LV ++G+R+ ++S LA++ +G
Sbjct: 90 VTEDGELYA--WGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEG 147
Query: 198 DVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+VF WG + GQ+ S S TPR +S C IV++A G ++ + D G VY WGY
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGY 207
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
G G + L P L F V + +G A+T+ G LY WG N
Sbjct: 208 N--GNGQLGLGNNGNQLTPCRLIALQGFC----VLQIASGYAHSLALTDEGLLYAWGANT 261
Query: 317 YGQLGLGTVEDQPFPLKV 334
YGQLG G +Q P++V
Sbjct: 262 YGQLGTGNKSNQLSPVQV 279
Score = 288 (106.4 bits), Expect = 9.4e-25, P = 9.4e-25
Identities = 75/243 (30%), Positives = 122/243 (50%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H +++T++ + +G+N + Q G G QG +L+G+++ + CG H+L
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLGNGTTN----QGVSPILVSTNLQGKRVTEVSCGSHHSL 141
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
LT G+V++ G+ GQ G G NQ TP V ++ + IV ++ +AV+D G+
Sbjct: 142 ALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGE 201
Query: 199 VFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
V+GWG + GQ+ + Q+ TP L +G ++ +ASG + L DEGL+Y+WG
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQL-TPCRLIALQGFC-VLQIASGYAHSLALTDEGLLYAWGA 259
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTFGAITNFGHLYM 311
YG LG G K S + P + K ++ + A T A T G +YM
Sbjct: 260 NTYGQLGTGNK-SNQLSPVQV---------MTEKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 312 WGK 314
WG+
Sbjct: 310 WGQ 312
Score = 243 (90.6 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 72/257 (28%), Positives = 133/257 (51%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G G V+ ++D +L+ G N SQLG + +P+ LV + ++
Sbjct: 75 KLISLSYGSGPHVLLV-TEDG--ELYAWGHNGYSQLGNGTTNQGVSPI-LVSTNLQ---- 126
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ ++ G H++ +T F +G N+ GQ G G + K N L
Sbjct: 127 ----GKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRK--VSNC--L 178
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+ + I++ CGQ ++ +T++G+VY G+ +GQ GLG+ NQ TPC + ++G +++
Sbjct: 179 QNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIA-LQGFCVLQ 237
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGS 240
++S LA++D+G ++ WG + YGQ+ Q+S +V+++ + RIV++A+ S
Sbjct: 238 IASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKE---RIVEIAACHS 294
Query: 241 ACTML--NDEGLVYSWG 255
T G VY WG
Sbjct: 295 THTSAAKTQSGQVYMWG 311
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 184 SSAVDCV-LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG-GSA 241
+SA + + + D+ V G S +S+ I+ P+ L C +++ ++ G G
Sbjct: 29 ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIA-PKKLD-CLSGKKLISLSYGSGPH 86
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
++ ++G +Y+WG Y LG G ++ + P L+ + L G+ +V + G
Sbjct: 87 VLLVTEDGELYAWGHNGYSQLGNGT-TNQGVSPILVSTNLQGK-------RVTEVSCGSH 138
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A+T+ G ++ WG N GQ+G G+ +QP P KV+
Sbjct: 139 HSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVS 175
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 255 (94.8 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 50 LELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGI 104
L L MS +P+P S +K +A +G H +T + F++G G+ G
Sbjct: 1833 LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 1892
Query: 105 VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
D I L+ ++I D CG H+ LT SG++Y+ G G G+ G G
Sbjct: 1893 RMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 1947
Query: 165 QETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPR 221
Q P +V+ + G R+++++ + D LA++D+G VF WG+ ++G++ + + P+
Sbjct: 1948 QLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2006
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTL 278
+ + G + + G L G+V++WG G LG G V KP ++ L
Sbjct: 2007 NIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVVEG-L 2063
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVG 337
G+ K+ + G A+T+ G +Y WG N +GQ G GT P V +
Sbjct: 2064 RGK-------KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2116
Query: 338 GQK 340
GQK
Sbjct: 2117 GQK 2119
Score = 248 (92.4 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 72/252 (28%), Positives = 124/252 (49%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G GI + + C +A L +++ G + TLF +T GK+Y+
Sbjct: 2729 YGWGHNHRGQLG-GI-EGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 2782
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 2783 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 2841
Query: 207 YGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 2842 DGKLGHGNRSPCDRPRVIESLRGIE-VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 2900
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 2901 DSEDQ-LKPKLVEA-LQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 2953
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 2954 GGSDGCKVPMKI 2965
Score = 219 (82.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 75/280 (26%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 2813 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 2867
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ +
Sbjct: 2868 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 2926
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 2927 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 2985
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 2986 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 3036
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 3037 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 3076
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 68/218 (31%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 1806 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 1864
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 1865 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 1923
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 1924 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 1976
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 1977 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 2014
Score = 211 (79.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 55/212 (25%), Positives = 102/212 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G AH+ +T +T+G +G+ G E+ + K + L+G +++
Sbjct: 2866 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-SEDQLKPKL----VEALQGHRVI 2920
Query: 129 DAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D CG TL LT+ V+S G G G+ G G + + P + + G +VK+
Sbjct: 2921 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECG 2979
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 2980 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCC 3038
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
++G VY+WG G LG G + +P L+
Sbjct: 3039 TEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLV 3069
Score = 208 (78.3 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 1928 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 1979
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 1980 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2034
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 2035 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDSGQVYAW 2090
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 2091 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2128
Score = 200 (75.5 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 72/216 (33%), Positives = 101/216 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 2717 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 2771
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 2772 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 2831
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 2832 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 2882
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WGK +YG+LG EDQ P V A+ G +
Sbjct: 2883 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 2918
Score = 181 (68.8 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 71/246 (28%), Positives = 116/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 1769 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 1818
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
++ G + G+ G G+ + ++ +K+ AV G H LT G
Sbjct: 1819 EGKVYSCGEATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 1875
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 1876 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 1932
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 1933 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1991
Query: 257 GLLGQG 262
G LG+G
Sbjct: 1992 GKLGRG 1997
Score = 97 (39.2 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 1909 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 1959
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 1960 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1997
Score = 96 (38.9 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 2067 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 2121
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 38 (18.4 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 2119 KITRVACGSSHSVAWT 2134
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 255 (94.8 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 50 LELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGI 104
L L MS +P+P S +K +A +G H +T + F++G G+ G
Sbjct: 1833 LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 1892
Query: 105 VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
D I L+ ++I D CG H+ LT SG++Y+ G G G+ G G
Sbjct: 1893 RMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 1947
Query: 165 QETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPR 221
Q P +V+ + G R+++++ + D LA++D+G VF WG+ ++G++ + + P+
Sbjct: 1948 QLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2006
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTL 278
+ + G + + G L G+V++WG G LG G V KP ++ L
Sbjct: 2007 NIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVVEG-L 2063
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVG 337
G+ K+ + G A+T+ G +Y WG N +GQ G GT P V +
Sbjct: 2064 RGK-------KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2116
Query: 338 GQK 340
GQK
Sbjct: 2117 GQK 2119
Score = 248 (92.4 bits), Expect = 6.6e-25, Sum P(2) = 6.6e-25
Identities = 72/252 (28%), Positives = 124/252 (49%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G GI + + C +A L +++ G + TLF +T GK+Y+
Sbjct: 2765 YGWGHNHRGQLG-GI-EGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 2818
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 2819 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 2877
Query: 207 YGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 2878 DGKLGHGNRSPCDRPRVIESLRGIE-VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 2936
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 2937 DSEDQ-LKPKLVEA-LQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 2989
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 2990 GGSDGCKVPMKI 3001
Score = 219 (82.2 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 75/280 (26%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 2849 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 2903
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ +
Sbjct: 2904 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 2962
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 2963 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 3021
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 3022 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 3072
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 3073 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 3112
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 68/218 (31%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 1806 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 1864
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 1865 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 1923
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 1924 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 1976
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 1977 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 2014
Score = 211 (79.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 55/212 (25%), Positives = 102/212 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G AH+ +T +T+G +G+ G E+ + K + L+G +++
Sbjct: 2902 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-SEDQLKPKL----VEALQGHRVI 2956
Query: 129 DAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D CG TL LT+ V+S G G G+ G G + + P + + G +VK+
Sbjct: 2957 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECG 3015
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 3016 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCC 3074
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
++G VY+WG G LG G + +P L+
Sbjct: 3075 TEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLV 3105
Score = 208 (78.3 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 1928 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 1979
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 1980 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2034
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 2035 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDSGQVYAW 2090
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 2091 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2128
Score = 200 (75.5 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 72/216 (33%), Positives = 101/216 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 2753 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 2807
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 2808 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 2867
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 2868 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 2918
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WGK +YG+LG EDQ P V A+ G +
Sbjct: 2919 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 2954
Score = 181 (68.8 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 71/246 (28%), Positives = 116/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 1769 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 1818
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
++ G + G+ G G+ + ++ +K+ AV G H LT G
Sbjct: 1819 EGKVYSCGEATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 1875
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 1876 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 1932
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 1933 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1991
Query: 257 GLLGQG 262
G LG+G
Sbjct: 1992 GKLGRG 1997
Score = 97 (39.2 bits), Expect = 6.6e-25, Sum P(2) = 6.6e-25
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 1909 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 1959
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 1960 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1997
Score = 96 (38.9 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 2067 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 2121
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 38 (18.4 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 2119 KITRVACGSSHSVAWT 2134
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 255 (94.8 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 50 LELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGI 104
L L MS +P+P S +K +A +G H +T + F++G G+ G
Sbjct: 2968 LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3027
Query: 105 VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
D I L+ ++I D CG H+ LT SG++Y+ G G G+ G G
Sbjct: 3028 RMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3082
Query: 165 QETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPR 221
Q P +V+ + G R+++++ + D LA++D+G VF WG+ ++G++ + + P+
Sbjct: 3083 QLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3141
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTL 278
+ + G + + G L G+V++WG G LG G V KP ++ L
Sbjct: 3142 NIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVVEG-L 3198
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVG 337
G+ K+ + G A+T+ G +Y WG N +GQ G GT P V +
Sbjct: 3199 RGK-------KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3251
Query: 338 GQK 340
GQK
Sbjct: 3252 GQK 3254
Score = 250 (93.1 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 72/280 (25%), Positives = 137/280 (48%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 441 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 492
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML-----VA 544
Query: 121 DLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 545 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 603
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
++K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 662
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP--TLIP 275
G + C L ++ V+SWG Q R KP T +P
Sbjct: 663 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP 702
Score = 248 (92.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 72/252 (28%), Positives = 124/252 (49%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G GI + + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3900 YGWGHNHRGQLG-GI-EGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 3953
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 3954 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4012
Query: 207 YGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIE-VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4071
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 4072 DSEDQ-LKPKLVEA-LQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4124
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4125 GGSDGCKVPMKI 4136
Score = 219 (82.2 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 75/280 (26%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3984 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4038
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ +
Sbjct: 4039 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4097
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4098 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4156
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 4157 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 4207
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4208 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4247
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/218 (31%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2941 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 2999
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3058
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3111
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3149
Score = 211 (79.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 55/212 (25%), Positives = 102/212 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G AH+ +T +T+G +G+ G E+ + K + L+G +++
Sbjct: 4037 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-SEDQLKPKL----VEALQGHRVI 4091
Query: 129 DAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D CG TL LT+ V+S G G G+ G G + + P + + G +VK+
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECG 4150
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 4151 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCC 4209
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
++G VY+WG G LG G + +P L+
Sbjct: 4210 TEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLV 4240
Score = 208 (78.3 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3063 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3114
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3115 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3169
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3170 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDSGQVYAW 3225
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3263
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 570
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG YG LG+G P LI Q KV G A+T
Sbjct: 571 QVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDVIKVR---CGSQFSIALTKD 621
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WGK +LG GT E +P L + G+K
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 656
Score = 201 (75.8 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 64/249 (25%), Positives = 114/249 (45%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + + +++G G+ G G + EE F A G+ ++ CG +
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA---GKHVVHIACGSTY 508
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++Y+ G G G+ G G ++ P LV G ++G +++ ++ + D LAV+
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVT 567
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + ++ V G L +G VYS
Sbjct: 568 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-VIKVRCGSQFSIALTKDGQVYS 626
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P L+ L G+ KV + AG A+T ++
Sbjct: 627 WGKGDNQRLGHGTE-EHVRYPKLLEG-LQGK-------KVIDVAAGSTHCLALTEDSEVH 677
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 678 SWGSNDQCQ 686
Score = 200 (75.5 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 72/216 (33%), Positives = 101/216 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3888 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3942
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3943 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4002
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4003 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4053
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WGK +YG+LG EDQ P V A+ G +
Sbjct: 4054 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 4089
Score = 183 (69.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 59/217 (27%), Positives = 100/217 (46%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L G +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 391 CEGLASL-G--VMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 436
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 496
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G ++ P L+ L G +
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAG-LKGLKVIDV 554
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+T G ++ WG YG+LG G
Sbjct: 555 ACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 586
Score = 181 (68.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 71/246 (28%), Positives = 116/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2904 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 2953
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
++ G + G+ G G+ + ++ +K+ AV G H LT G
Sbjct: 2954 EGKVYSCGEATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 3010
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3011 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 3067
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3068 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3126
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3127 GKLGRG 3132
Score = 130 (50.8 bits), Expect = 0.00028, P = 0.00028
Identities = 47/134 (35%), Positives = 61/134 (45%)
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQ 261
Y Q S+M P+++ Q IV +A S G L G VYSWG G LG
Sbjct: 419 YTQAYNSDML--APQLV-QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH 475
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G V +P +I + F Q V + G AIT G LY WG+ YG+LG
Sbjct: 476 GDTVPLE-EPKVISA--FSGKQAG--KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG 530
Query: 322 LGTVEDQPFPLKVA 335
G+ ED+ P+ VA
Sbjct: 531 HGSSEDEAIPMLVA 544
Score = 97 (39.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3044 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3094
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3095 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3132
Score = 96 (38.9 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3202 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3256
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3257 RVACGSSHSVAWT 3269
Score = 49 (22.3 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2938 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 2983
Score = 38 (18.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3254 KITRVACGSSHSVAWT 3269
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 255 (94.8 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 50 LELVMSFVRIPLP---VKHPSTQIKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGI 104
L L MS +P+P S +K +A +G H +T + F++G G+ G
Sbjct: 3025 LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084
Query: 105 VQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
D I L+ ++I D CG H+ LT SG++Y+ G G G+ G G
Sbjct: 3085 RMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 3139
Query: 165 QETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPR 221
Q P +V+ + G R+++++ + D LA++D+G VF WG+ ++G++ + + P+
Sbjct: 3140 QLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198
Query: 222 VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTL 278
+ + G + + G L G+V++WG G LG G V KP ++ L
Sbjct: 3199 NIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVVEG-L 3255
Query: 279 FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVG 337
G+ K+ + G A+T+ G +Y WG N +GQ G GT P V +
Sbjct: 3256 RGK-------KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308
Query: 338 GQK 340
GQK
Sbjct: 3309 GQK 3311
Score = 251 (93.4 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 74/287 (25%), Positives = 140/287 (48%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 496 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 547
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML-----VA 599
Query: 121 DLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 658
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
++K+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 717
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP--TLIPSTLFGQH 282
G + C L ++ V+SWG Q R KP T +P L +H
Sbjct: 718 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPG-LDSKH 763
Score = 248 (92.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 72/252 (28%), Positives = 124/252 (49%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G GI + + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3957 YGWGHNHRGQLG-GI-EGAKVKVPTPCEALATLRPVQLI----GGEQTLFAVTADGKLYA 4010
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4069
Query: 207 YGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ PRV+ +G+ +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIE-VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 4129 DSEDQ-LKPKLVEA-LQGHRVIDIACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4182 GGSDGCKVPMKI 4193
Score = 219 (82.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 75/280 (26%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4095
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R++ ++ +
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVIDIACGS 4154
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4155 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4213
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 4214 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 4264
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4304
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/218 (31%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVYSCG +G+ GLG +++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3168
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3206
Score = 211 (79.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 55/212 (25%), Positives = 102/212 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G AH+ +T +T+G +G+ G E+ + K + L+G +++
Sbjct: 4094 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-SEDQLKPKL----VEALQGHRVI 4148
Query: 129 DAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
D CG TL LT+ V+S G G G+ G G + + P + + G +VK+
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECG 4207
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 4208 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCC 4266
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
++G VY+WG G LG G + +P L+
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLV 4297
Score = 208 (78.3 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3120 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3171
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3172 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3227 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDSGQVYAW 3282
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 625
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG YG LG+G P LI Q KV G A+T
Sbjct: 626 QVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDVIKVR---CGSQFSIALTKD 676
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WGK +LG GT E +P L + G+K
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711
Score = 201 (75.8 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 64/249 (25%), Positives = 114/249 (45%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + + +++G G+ G G + EE F A G+ ++ CG +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA---GKHVVHIACGSTY 563
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++Y+ G G G+ G G ++ P LV G ++G +++ ++ + D LAV+
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVT 622
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + ++ V G L +G VYS
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-VIKVRCGSQFSIALTKDGQVYS 681
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P L+ L G+ KV + AG A+T ++
Sbjct: 682 WGKGDNQRLGHGTE-EHVRYPKLLEG-LQGK-------KVIDVAAGSTHCLALTEDSEVH 732
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 733 SWGSNDQCQ 741
Score = 200 (75.5 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 72/216 (33%), Positives = 101/216 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3945 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3999
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4110
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WGK +YG+LG EDQ P V A+ G +
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 4146
Score = 183 (69.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 59/217 (27%), Positives = 100/217 (46%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A L G +M C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLASL-G--VMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQLVQG-L 491
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G ++ P L+ L G +
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAG-LKGLKVIDV 609
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+T G ++ WG YG+LG G
Sbjct: 610 ACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 181 (68.8 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 71/246 (28%), Positives = 116/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2961 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 3010
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
++ G + G+ G G+ + ++ +K+ AV G H LT G
Sbjct: 3011 EGKVYSCGEATNGRLGLGMSSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 3067
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3068 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3184 GKLGRG 3189
Score = 130 (50.8 bits), Expect = 0.00028, P = 0.00028
Identities = 47/134 (35%), Positives = 61/134 (45%)
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQ 261
Y Q S+M P+++ Q IV +A S G L G VYSWG G LG
Sbjct: 474 YTQAYNSDML--APQLV-QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGH 530
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G V +P +I + F Q V + G AIT G LY WG+ YG+LG
Sbjct: 531 GDTVPLE-EPKVISA--FSGKQAG--KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG 585
Query: 322 LGTVEDQPFPLKVA 335
G+ ED+ P+ VA
Sbjct: 586 HGSSEDEAIPMLVA 599
Score = 97 (39.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3151
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3152 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Score = 96 (38.9 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 49 (22.3 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 3040
Score = 38 (18.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3311 KITRVACGSSHSVAWT 3326
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 258 (95.9 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 89/325 (27%), Positives = 148/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L + IP + S + K +A +G H +
Sbjct: 3008 KVYACGEATNGRLG----------LGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMA 3057
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ +T
Sbjct: 3058 LTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS 3112
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++YS G G G+ G G Q P LV+ + G R+V+++ + D LA++D+G VF
Sbjct: 3113 SGELYSWGLGEYGRLGHGDNTTQLRPKLVK-VLLGHRVVQVACGSRDAQTLALTDEGMVF 3171
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3172 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3230
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T G ++ WG N
Sbjct: 3231 FRLGHGTDV-HVRKPQMVEG-LRGK-------KIVHVAVGALHCLAVTETGQVFAWGDND 3281
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3282 HGQQGNGTTTVNRKPTLVQGLEGQK 3306
Score = 246 (91.7 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 62/209 (29%), Positives = 105/209 (50%)
Query: 133 GQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDC 189
G + TLF +T GK+Y+ G+GA G+ G+G + TP L+ + ++ S C
Sbjct: 3990 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHC 4049
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
LA+S +G+++ WG +E G++ PRV+ +GV +VD+A+GG+ +
Sbjct: 4050 -LALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVE-VVDIAAGGAHSACITAS 4107
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G +Y+WG YG LG G + +KP L+ + L G + +G +T+
Sbjct: 4108 GELYTWGKGRYGRLGHGDSEDQ-LKPKLVEA-LQGHRVIDVACG-----SGDAQTLCLTD 4160
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG YG+LG G + P+K+
Sbjct: 4161 DDMVWSWGDGDYGKLGRGGSDGCKVPMKI 4189
Score = 228 (85.3 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 83/322 (25%), Positives = 135/322 (41%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ G + +LG P L+ S ++H + + +G H + ++
Sbjct: 4003 KLYATGYGAGGRLGIGGTESVSTPT-LLES-------IQHVFIRKVAVNSGGKHCLALSS 4054
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+++G G+ G G D I L G +++D G H+ +T SG+
Sbjct: 4055 EGELYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITASGE 4109
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWG 203
+Y+ G G G+ G G +Q P LV ++G R++ ++ + D L ++D V+ WG
Sbjct: 4110 LYTWGKGRYGRLGHGDSEDQLKPKLVEA-LQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 4168
Query: 204 NSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+ +YG++ P + G+ +V V G L G VY+WG Y L
Sbjct: 4169 DGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4227
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G +P + L G+ KV ++ G T G +Y WG N GQ
Sbjct: 4228 GHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4278
Query: 320 LGLGTVEDQPFP-LKVAVGGQK 340
LG GT P L A+ G+K
Sbjct: 4279 LGDGTTNAIQRPRLVAALQGKK 4300
Score = 216 (81.1 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 68/218 (31%), Positives = 104/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 2993 VAGGSKSLFAVTAEGKVYACGEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSG 3051
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G VF WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3052 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3110
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +YSWG YG LG G ++ ++P L+ L G H+ +V T A
Sbjct: 3111 TSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLV-KVLLG-HRV---VQVACGSRDAQTL-A 3163
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3164 LTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3201
Score = 215 (80.7 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 112/242 (46%)
Query: 103 GIVQEEDYQGKWFCHNIAD-LEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGL 159
G V ++Y+ + L KIM D H L L+ +G+V+S G G G+ G
Sbjct: 460 GAVYTQNYKSTTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGH 519
Query: 160 GHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE--SE 214
G E P ++ G G+++V ++ A++ G++ WG YG++ SE
Sbjct: 520 GDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSE 579
Query: 215 MQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSM 269
Q +TP +++ KG+ +++DVA G G A T+ + + G V+SWG YG LG+G
Sbjct: 580 DQ-TTPMLVTALKGL-KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCK 636
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
P L+ + + G A+T G +Y WGK +LG GT E
Sbjct: 637 TPKLVEKL--------QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVR 688
Query: 330 FP 331
+P
Sbjct: 689 YP 690
Score = 209 (78.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 66/218 (30%), Positives = 105/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3115 ELYSWGLGEYGRLGHGD-----NTTQLRPKLVKVLLG--HRVVQVA-CGSRDAQTLALTD 3166
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3167 EGMVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3221
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH + P +V G + G++IV ++ A+ C LAV++ G VF W
Sbjct: 3222 VWT--WGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHC-LAVTETGQVFAW 3277
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3278 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3315
Score = 207 (77.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 65/245 (26%), Positives = 114/245 (46%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQ--EEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + ++ N F++G G+ G G EE F G++++ CG +
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPV---GKQVVHIACGSTY 552
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++++ G G G+ G G +Q TP LV ++G +++ ++ + D LAV+
Sbjct: 553 SAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTA-LKGLKVIDVACGSGDAQTLAVT 611
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + IV V G L +G VY+
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLD-IVKVCCGSQFSVALTKDGQVYT 670
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G P L+ S L G+ +V + G A+T G ++
Sbjct: 671 WGKGDNQRLGHGTD-EHVRYPKLLDS-LQGK-------RVVDIAVGSTHCLALTEEGEVH 721
Query: 311 MWGKN 315
WG N
Sbjct: 722 SWGSN 726
Score = 203 (76.5 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 72/213 (33%), Positives = 100/213 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVDCVLAV 193
D TL SG +Y GWG + + LG + + E + R V+L + AV
Sbjct: 3941 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAV 3998
Query: 194 SDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLV 251
+ G ++ G G++ + +STP +L + V R V V SGG C L+ EG +
Sbjct: 3999 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 4058
Query: 252 YSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
YSWG G LG G + S +P +I S L G +V + AG IT G
Sbjct: 4059 YSWGEAEDGKLGHGNR-SPCDRPRVIES-LRGV-------EVVDIAAGGAHSACITASGE 4109
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
LY WGK +YG+LG G EDQ P V A+ G +
Sbjct: 4110 LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHR 4142
Score = 189 (71.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 71/246 (28%), Positives = 117/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2956 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTA 3005
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G G+ + +++ +K+ AV G H + LT G
Sbjct: 3006 EGKVYACGEATNGRLGLGLSSGTIPIPRQISA-LSNYVVKKV--AVHSGGRHAMALTVDG 3062
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3063 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSW 3119
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R+V VA G A T+ L DEG+V+SWG +
Sbjct: 3120 GLGEYGRLGHGDNTTQLRPKLVKVLLG-HRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 3178
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3179 GKLGRG 3184
Score = 163 (62.4 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 50/206 (24%), Positives = 101/206 (49%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ IACG ++ T D L +G G + +LG+ + P+ LV + + +
Sbjct: 542 QVVHIACGSTYSAAITA--DGELHTWGRG--NYGRLGHGSSEDQTTPM-LVTALKGLKV- 595
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ +G A T+ +T+N +++G+ +G+ GRG + + + DL
Sbjct: 596 -----IDVA-CGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDL 647
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERI 180
+ I+ CG ++ LT+ G+VY+ WG LGH ++ P L+ ++G+R+
Sbjct: 648 D---IVKVCCGSQFSVALTKDGQVYT--WGKGDNQRLGHGTDEHVRYPKLL-DSLQGKRV 701
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSE 206
V ++ LA++++G+V WG+++
Sbjct: 702 VDIAVGSTHCLALTEEGEVHSWGSND 727
Score = 153 (58.9 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 56/206 (27%), Positives = 95/206 (46%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+ VC + L LT +G VY+ + + T L P LV + +I+KL++
Sbjct: 443 VTQIVCSEKGFLILTITGAVYTQNYKS---TTLA-------PMLVHA-LTSRKIMKLAAH 491
Query: 187 VDC--VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKG--VSR-IVDVASGGS 240
D LA+S G+VF WG + G++ + + P ++S G V + +V +A G +
Sbjct: 492 PDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGST 551
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
+ +G +++WG YG LG G ++ P L+ + L G + +G
Sbjct: 552 YSAAITADGELHTWGRGNYGRLGHGSSEDQTT-PMLV-TALKGLKVIDVACG-----SGD 604
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLG 323
A+T G ++ WG YG+LG G
Sbjct: 605 AQTLAVTENGQVWSWGDGDYGKLGRG 630
Score = 100 (40.3 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3096 RIRDIACGSSHSAAITSSGE----LYSWGLGEYGRLGHGD-----NTTQLRPKLVKVLLG 3146
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3147 --HRVVQVA-CGSRDAQTLALTDEGMVFSWGDGDFGKLGRG 3184
Score = 94 (38.1 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +T+ F +G+N GQ G G + LEG+KI
Sbjct: 3254 KIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3308
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3309 RVACGSSHSVAWT 3321
Score = 89 (36.4 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 192 AVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A + + VF WG ++ Q+ + +I P S+ +V VA G + + EG
Sbjct: 2950 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPS-FSETLSALNVVQVAGGSKSLFAVTAEGK 3008
Query: 251 VYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
VY+ G G+ G +S P IP + + K KV ++ +G A+T G +
Sbjct: 3009 VYACGEATNGRLGLGLSSGTIP--IPRQISALSNYVVK-KV-AVHSGGRHAMALTVDGKV 3064
Query: 310 YMWGKNQYGQLG 321
+ WG+ G+LG
Sbjct: 3065 FSWGEGDDGKLG 3076
Score = 51 (23.0 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKVA 335
V + G + A+T G +Y G+ G+LGLG P P +++
Sbjct: 2990 VVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQIS 3036
Score = 50 (22.7 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 22/94 (23%), Positives = 40/94 (42%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ I + CG F+V TK D + +G G N +LG+ P +L+ S
Sbjct: 647 LDIVKVCCGSQFSVALTK--DGQVYTWGKGDNQ--RLGHGTDEHVRYP-KLLDSL----- 696
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNN 95
++ +A G H + +T+ ++G+N
Sbjct: 697 ----QGKRVVDIAVGSTHCLALTEEGEVHSWGSN 726
Score = 41 (19.5 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 2 IKITDIACGYG 12
+K+ D+ACG G
Sbjct: 593 LKVIDVACGSG 603
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3306 KITRVACGSSHSVAWT 3321
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 280 (103.6 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 83/267 (31%), Positives = 121/267 (45%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
T + + +TDN+ F FG N + C G G D Q + L G+KI G
Sbjct: 29 TSASEALYVTDNDEVFVFGLN-YSNCLGTG-----DNQSTLVPKKLEGLCGKKIKSLSYG 82
Query: 134 QD-HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
H L TE G VY+ WG +G Q G G N P V + +++V+++
Sbjct: 83 SGPHVLLSTEDGVVYA--WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
VY WGY G G + L P + H V ++ G A+T+ G L
Sbjct: 201 EVYGWGYN--GNGQLGLGNNGNQLTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WG N YGQLG G + P + V
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMV 281
Score = 263 (97.6 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 95/319 (29%), Positives = 149/319 (46%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L L K
Sbjct: 24 ACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE------GLCGK--- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G + C N+ ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-GIAPVQVCTNLLI---KQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV D G+V+GWG + GQ+ + Q++ RV S C V++IV G A
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC--VNQIVC----GYA 243
Query: 242 CTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-- 295
T+ L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACH 293
Query: 296 GPCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 294 SAHTSAAKTQGGHVYMWGQ 312
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 279 (103.3 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 84/270 (31%), Positives = 125/270 (46%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
T I +TDN+ F FG N + C G G D Q + L G+KI G
Sbjct: 29 TSANEAIYVTDNDEVFVFGLN-YSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYG 82
Query: 134 QD-HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
H L TE G VY+ WG +G Q G G N P V + +++++++
Sbjct: 83 SGPHVLLTTEDGVVYA--WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+A++ G++F WG + GQ+ S S TPR ++ C R+V++A G ++ + D G
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG 200
Query: 250 LVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
VY WGY G LG G + P + + L G V ++ G A+T+
Sbjct: 201 EVYGWGYNGNGQLGLGNN-GNQLTPVRV-AALHGMC-------VNQIVCGYAHTLALTDE 251
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G LY WG N YGQLG G+ + P ++ V
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMV 281
Score = 269 (99.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 89/315 (28%), Positives = 146/315 (46%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L L K
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA------LCGK--- 74
Query: 68 TQIKHLATGRAHTIVITDNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G +++T +G + +G+N + Q G G + C N+ ++
Sbjct: 75 -KIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQ-GIAPVQVCTNLLI---KQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G++++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV D G+V+GWG + GQ+ + Q++ RV + G+ + + G +
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHGMC-VNQIVCGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 298 SAAKTQGGHVYMWGQ 312
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 277 (102.6 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 83/267 (31%), Positives = 120/267 (44%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
T + +TDN+ F FG N + C G G D Q + L G+KI G
Sbjct: 58 TSANEALYVTDNDEVFVFGLN-YSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYG 111
Query: 134 QD-HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
H L TE G VY+ WG +G Q G G N P V + +++V+++
Sbjct: 112 SGPHVLLSTEDGVVYA--WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 169
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 170 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 229
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
VY WGY G G + L P + H V ++ G A+T+ G L
Sbjct: 230 EVYGWGYN--GNGQLGLGNNGNQLTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 283
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WG N YGQLG G + P + V
Sbjct: 284 YAWGANTYGQLGTGNKNNLLSPAHIMV 310
Score = 264 (98.0 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 95/319 (29%), Positives = 149/319 (46%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L L K
Sbjct: 53 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA------LCGK--- 103
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G + C N+ ++
Sbjct: 104 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-GIAPIQVCTNLLI---KQ 158
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 159 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 218
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV D G+V+GWG + GQ+ + Q++ RV S C V++IV G A
Sbjct: 219 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC--VNQIVC----GYA 272
Query: 242 CTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-- 295
T+ L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 273 HTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACH 322
Query: 296 GPCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 323 SAHTSAAKTQGGHVYMWGQ 341
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 276 (102.2 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 83/267 (31%), Positives = 120/267 (44%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
T + +TDN+ F FG N + C G G D Q + L G+KI G
Sbjct: 29 TSANEALYVTDNDEVFVFGLN-YSNCLGTG-----DNQSTLVPKKLEALCGKKIKSLSYG 82
Query: 134 QD-HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
H L TE G VY+ WG +G Q G G N P V + +++V+++
Sbjct: 83 SGPHVLLSTEDGVVYA--WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
VY WGY G G + L P + H V ++ G A+T+ G L
Sbjct: 201 EVYGWGYN--GNGQLGLGNNGNQLTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WG N YGQLG G + P + V
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMV 281
Score = 264 (98.0 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 95/319 (29%), Positives = 149/319 (46%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L L K
Sbjct: 24 ACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA------LCGK--- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+IK L+ G H ++ T++ + +G+N + Q G G + C N+ ++
Sbjct: 75 -KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-GIAPIQVCTNLLI---KQ 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVL---SQCKGVSRIVDVASGGSA 241
+AV D G+V+GWG + GQ+ + Q++ RV S C V++IV G A
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC--VNQIVC----GYA 243
Query: 242 CTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-- 295
T+ L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVVEIAACH 293
Query: 296 GPCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 294 SAHTSAAKTQGGHVYMWGQ 312
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 88/325 (27%), Positives = 149/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L + V IP + S+ + K +A +G H
Sbjct: 2933 KVYACGEATNGRLG----------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 2982
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ LT
Sbjct: 2983 LTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS 3037
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P +V+ + G R+++++ + D LA++D+G VF
Sbjct: 3038 SGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVF 3096
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3097 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3155
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3156 FRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYAWGDND 3206
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3207 HGQQGNGTTTVNRKPTLVQGLEGQK 3231
Score = 253 (94.1 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 75/283 (26%), Positives = 138/283 (48%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 406 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 457
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML-----VA 509
Query: 121 DLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 510 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 568
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 569 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 627
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
G + C L ++ V+SWG Q R KP PS L G
Sbjct: 628 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 668
Score = 244 (91.0 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 72/252 (28%), Positives = 124/252 (49%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G GI + + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3878 YGWGHNHRGQLG-GI-EGAKVKVPTPCEALAALRPVQLI----GGEQTLFAVTADGKLYA 3931
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 3932 TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 3990
Query: 207 YGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ PRV+ +G + +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 3991 DGKLGHGNRSPCDRPRVIESLRG-TEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4049
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 4050 DSEDQ-LKPKLVEA-LQGHRVVDVACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4102
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4103 GGSDGCKVPMKI 4114
Score = 218 (81.8 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 56/213 (26%), Positives = 104/213 (48%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T++ +A G AH+ +T +T+G +G+ G E+ + K + L+G ++
Sbjct: 4014 TEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-SEDQLKPKL----VEALQGHRV 4068
Query: 128 MDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+D CG TL LT+ V+S G G G+ G G + + P + + G +VK+
Sbjct: 4069 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVEC 4127
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 4128 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVC 4186
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+++G VY+WG G LG G + +P L+
Sbjct: 4187 CSEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLV 4218
Score = 217 (81.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 75/280 (26%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 3962 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGTEV 4016
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ +
Sbjct: 4017 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4075
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4076 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4134
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 4135 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 4185
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4186 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4225
Score = 209 (78.6 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 67/218 (30%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2918 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 2976
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 2977 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3035
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3036 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3088
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3089 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3126
Score = 207 (77.9 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3040 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3091
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3092 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3146
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3147 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDAGQVYAW 3202
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3203 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3240
Score = 206 (77.6 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 535
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG YG LG+G P LI Q KV G A+T
Sbjct: 536 QVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDVVKVR---CGSQFSVALTKD 586
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WGK +LG GT E +P L + G+K
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 621
Score = 203 (76.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 65/249 (26%), Positives = 114/249 (45%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + + +++G G+ G G + EE F A G+ ++ CG +
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA---GKHVVHIACGSTY 473
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++Y+ G G G+ G G ++ P LV G ++G +++ ++ + D LAV+
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVT 532
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + +V V G L +G VYS
Sbjct: 533 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-VVKVRCGSQFSVALTKDGQVYS 591
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P L+ L G+ KV + AG A+T ++
Sbjct: 592 WGKGDNQRLGHGTE-EHVRYPKLLEG-LQGK-------KVIDVAAGSTHCLALTEDSEVH 642
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 643 SWGSNDQCQ 651
Score = 183 (69.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 72/246 (29%), Positives = 115/246 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2881 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 2930
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G GI + ++ +K+ AV G H LT G
Sbjct: 2931 EGKVYACGEATNGRLGLGISSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 2987
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 2988 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 3044
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3045 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3103
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3104 GKLGRG 3109
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L G + C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 356 CEGLANL-G--VTQIACAEKRFLILSRNGRVYTQAYNSDTLA----------PQLVQG-L 401
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 461
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G ++ P L+ L G +
Sbjct: 462 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAG-LKGLKVIDV 519
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+T G ++ WG YG+LG G
Sbjct: 520 ACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 551
Score = 139 (54.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 59/195 (30%), Positives = 94/195 (48%)
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV--DCVLAVSD 195
LFL E K ADG+ + L+ E+ + R E + E++V+ + D L+
Sbjct: 3819 LFLDEVAKKIR-ELMADGEN-MDVLH--ESHSIFRRE-QDEQLVQWMNRRPDDWTLSAGG 3873
Query: 196 KGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVY 252
G ++GWG++ GQ+ E ++ P + C+ ++ R V + G + +G +Y
Sbjct: 3874 SGTIYGWGHNHRGQLGGIEGAKVKVP---TPCEALAALRPVQLIGGEQTLFAVTADGKLY 3930
Query: 253 SWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CTFGAITNFGH 308
+ GYG LG G S S PTL+ S QH F K V S G C A+++ G
Sbjct: 3931 ATGYGAGGRLGVGGTESVST-PTLLESI---QHVFIKKVAVNS--GGKHCL--ALSSEGE 3982
Query: 309 LYMWGKNQYGQLGLG 323
+Y WG+ + G+LG G
Sbjct: 3983 VYSWGEAEDGKLGHG 3997
Score = 127 (49.8 bits), Expect = 0.00059, P = 0.00059
Identities = 41/109 (37%), Positives = 51/109 (46%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V +P +I + F Q
Sbjct: 406 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISA--FSGKQAG- 461
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 462 -KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 509
Score = 97 (39.2 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3021 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3071
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3072 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3109
Score = 93 (37.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3179 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3233
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3234 RVACGSSHSVAWT 3246
Score = 49 (22.3 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2915 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 2960
Score = 38 (18.4 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3231 KITRVACGSSHSVAWT 3246
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 88/325 (27%), Positives = 149/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L + V IP + S+ + K +A +G H
Sbjct: 3023 KVYACGEATNGRLG----------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 3072
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ LT
Sbjct: 3073 LTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS 3127
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P +V+ + G R+++++ + D LA++D+G VF
Sbjct: 3128 SGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVF 3186
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3187 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3245
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3246 FRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYAWGDND 3296
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3297 HGQQGNGTTTVNRKPTLVQGLEGQK 3321
Score = 253 (94.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 75/283 (26%), Positives = 138/283 (48%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 496 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 547
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML-----VA 599
Query: 121 DLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 658
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 717
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
G + C L ++ V+SWG Q R KP PS L G
Sbjct: 718 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PSALPG 758
Score = 244 (91.0 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 72/252 (28%), Positives = 124/252 (49%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF-LTESGKVYS 148
+ +G+N GQ G GI + + C +A L +++ G + TLF +T GK+Y+
Sbjct: 3968 YGWGHNHRGQLG-GI-EGAKVKVPTPCEALAALRPVQLI----GGEQTLFAVTADGKLYA 4021
Query: 149 CGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G+GA G+ G+G + TP L+ + +++ S C LA+S +G+V+ WG +E
Sbjct: 4022 TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC-LALSSEGEVYSWGEAE 4080
Query: 207 YGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
G++ PRV+ +G + +VDVA+GG+ + G +Y+WG YG LG
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRG-TEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4139
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +KP L+ + L G + +G +T+ ++ WG YG+LG
Sbjct: 4140 DSEDQ-LKPKLVEA-LQGHRVVDVACG-----SGDAQTLCLTDDDTVWSWGDGDYGKLGR 4192
Query: 323 GTVEDQPFPLKV 334
G + P+K+
Sbjct: 4193 GGSDGCKVPMKI 4204
Score = 218 (81.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 56/213 (26%), Positives = 104/213 (48%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
T++ +A G AH+ +T +T+G +G+ G E+ + K + L+G ++
Sbjct: 4104 TEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-SEDQLKPKL----VEALQGHRV 4158
Query: 128 MDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+D CG TL LT+ V+S G G G+ G G + + P + + G +VK+
Sbjct: 4159 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVEC 4217
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+A++ G V+ WG +Y ++ S+ + PR + +G +++ +A+G C
Sbjct: 4218 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVC 4276
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
+++G VY+WG G LG G + +P L+
Sbjct: 4277 CSEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLV 4308
Score = 217 (81.4 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 75/280 (26%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4052 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGTEV 4106
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ +
Sbjct: 4107 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4165
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4166 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4224
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 4225 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 4275
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+ G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4276 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4315
Score = 209 (78.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 67/218 (30%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3008 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3066
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3067 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3125
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3126 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3178
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3179 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3216
Score = 207 (77.9 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3130 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3181
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3182 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3236
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3237 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDAGQVYAW 3292
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3293 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3330
Score = 206 (77.6 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 625
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG YG LG+G P LI Q KV G A+T
Sbjct: 626 QVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDVVKVR---CGSQFSVALTKD 676
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WGK +LG GT E +P L + G+K
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711
Score = 203 (76.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 65/249 (26%), Positives = 114/249 (45%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + + +++G G+ G G + EE F A G+ ++ CG +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA---GKHVVHIACGSTY 563
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++Y+ G G G+ G G ++ P LV G ++G +++ ++ + D LAV+
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVT 622
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + +V V G L +G VYS
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-VVKVRCGSQFSVALTKDGQVYS 681
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P L+ L G+ KV + AG A+T ++
Sbjct: 682 WGKGDNQRLGHGTE-EHVRYPKLLEG-LQGK-------KVIDVAAGSTHCLALTEDSEVH 732
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 733 SWGSNDQCQ 741
Score = 183 (69.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 72/246 (29%), Positives = 115/246 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2971 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 3020
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G GI + ++ +K+ AV G H LT G
Sbjct: 3021 EGKVYACGEATNGRLGLGISSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 3077
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3078 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 3134
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3135 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3193
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3194 GKLGRG 3199
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L G + C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANL-G--VTQIACAEKRFLILSRNGRVYTQAYNSDTLA----------PQLVQG-L 491
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G ++ P L+ L G +
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAG-LKGLKVIDV 609
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+T G ++ WG YG+LG G
Sbjct: 610 ACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 139 (54.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 59/195 (30%), Positives = 94/195 (48%)
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV--DCVLAVSD 195
LFL E K ADG+ + L+ E+ + R E + E++V+ + D L+
Sbjct: 3909 LFLDEVAKKIR-ELMADGEN-MDVLH--ESHSIFRRE-QDEQLVQWMNRRPDDWTLSAGG 3963
Query: 196 KGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVY 252
G ++GWG++ GQ+ E ++ P + C+ ++ R V + G + +G +Y
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAKVKVP---TPCEALAALRPVQLIGGEQTLFAVTADGKLY 4020
Query: 253 SWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CTFGAITNFGH 308
+ GYG LG G S S PTL+ S QH F K V S G C A+++ G
Sbjct: 4021 ATGYGAGGRLGVGGTESVST-PTLLESI---QHVFIKKVAVNS--GGKHCL--ALSSEGE 4072
Query: 309 LYMWGKNQYGQLGLG 323
+Y WG+ + G+LG G
Sbjct: 4073 VYSWGEAEDGKLGHG 4087
Score = 127 (49.8 bits), Expect = 0.00060, P = 0.00060
Identities = 41/109 (37%), Positives = 51/109 (46%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V +P +I + F Q
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISA--FSGKQAG- 551
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 552 -KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 97 (39.2 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3111 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3161
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3162 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3199
Score = 93 (37.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3269 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3323
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3324 RVACGSSHSVAWT 3336
Score = 49 (22.3 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 3005 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3050
Score = 38 (18.4 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3321 KITRVACGSSHSVAWT 3336
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 276 (102.2 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 79/255 (30%), Positives = 127/255 (49%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G HT V+T N + FG+N +GQ G G ++ K C + L+ EK AV
Sbjct: 41 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLG---SKNTVRKPTC--VKALKPEKTKLAV 95
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G ++GQ GLG + T L+ +I +L++
Sbjct: 96 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 155
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
AV++ G +F WG++ GQI ++ +S P + K VS I + G + +G
Sbjct: 156 AVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI---SCGYYHSAFITGDGE 212
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
+Y++G G+ + +K + +P + G + KV + G +T G +Y
Sbjct: 213 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-----KVNKVACGGEHTVVLTETG-VY 266
Query: 311 MWGKNQYGQLGLGTV 325
+G QYGQLG GT+
Sbjct: 267 TFGLGQYGQLGHGTL 281
Score = 209 (78.6 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 77/275 (28%), Positives = 127/275 (46%)
Query: 57 VRIPLPVKHPSTQIKHLAT-GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
VR P VK + LA GR HT+V T+ + G NS GQ G G +E F
Sbjct: 77 VRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTT----F 132
Query: 116 CHNIADLEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
H I+ + KI G + +TE G+++ G ++GQ GL PC V +
Sbjct: 133 -HLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQV--D 189
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
+ G+ + +S ++ G+++ +G E G++ Q+ RV G+ V+
Sbjct: 190 V-GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVN 248
Query: 235 -VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
VA GG +L + G VY++G YG LG G + + T +P ++ +H + K+
Sbjct: 249 KVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFK----TSVPKSV--KHLRS--HKI 299
Query: 291 ESLIAGPCTFGAI--TNFGHLYMWGKNQYGQLGLG 323
++ G I T G ++ +G ++G+LGLG
Sbjct: 300 HNVTCGESHTAVIADTENGLMFTFGDGRHGKLGLG 334
Score = 190 (71.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 74/285 (25%), Positives = 135/285 (47%)
Query: 5 TDIA-CGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
T +A CG T+V T+ + ++ G NS+ QLG D ++ L+ F
Sbjct: 91 TKLAVCGRNHTLVYTEKGN----VYAAGGNSEGQLGLGDTEER-TTFHLISFFTN----- 140
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+H +IK LA G + +T++ F +G+NS GQ G + + C D+
Sbjct: 141 QH---KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIG--LADKTCVSVP--CQ--VDV- 190
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL--GHLNNQETPCLVRGEIEGERIV 181
G+ + CG H+ F+T G++Y+ G +G+ GL L N P V G +E ++
Sbjct: 191 GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME--KVN 248
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGG 239
K++ + + +++ G V+ +G +YGQ+ + + S P+ + + +I +V G
Sbjct: 249 KVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRS-HKIHNVTCGE 306
Query: 240 SACTMLND--EGLVYSWG---YGLLGQGPK-VSRSMKPTLIPSTL 278
S ++ D GL++++G +G LG G + + P L + L
Sbjct: 307 SHTAVIADTENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFL 351
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/242 (24%), Positives = 105/242 (43%)
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+ ++ FTFG ++F E+ K WF + +K + CG +HT +T
Sbjct: 10 VPESGAVFTFGKSNFA---------ENIPSKFWF-------KNDKPVHISCGDEHTAVVT 53
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
+GK+Y G GQ GLG N P V+ ++ E+ + L ++KG+V+
Sbjct: 54 GNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGRNHTLVYTEKGNVYA 112
Query: 202 WGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
G + GQ+ + + T ++S +I +A+G + ++G ++ WG G
Sbjct: 113 AGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEG 172
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
Q ++ +P Q + V S+ G IT G LY +G+ + G+L
Sbjct: 173 QIGLADKTC--VSVPC------QVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKL 224
Query: 321 GL 322
GL
Sbjct: 225 GL 226
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 60/225 (26%), Positives = 99/225 (44%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G NS+ Q+G D + V +P V + ++ G H+ IT
Sbjct: 162 QLFVWGDNSEGQIGLADK-----------TCVSVPCQVD-VGKPVSSISCGYYHSAFITG 209
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +TFG G+ G + E + + + EK+ CG +HT+ LTE+G
Sbjct: 210 DGELYTFGEPENGKLG---LLPEQLKNSRVPQPVLGIM-EKVNKVACGGEHTVVLTETG- 264
Query: 146 VYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERI--VKLSSAVDCVLAVSDKGDVFGW 202
VY+ G G GQ G G L P V+ + +I V + V+A ++ G +F +
Sbjct: 265 VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIADTENGLMFTF 323
Query: 203 GNSEYGQISESEMQISTPRVLSQCKG-VS-RIVDVASGGSACTML 245
G+ +G++ E + + C +S ++ VA GG C ML
Sbjct: 324 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGG--CHML 366
Score = 129 (50.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 44/166 (26%), Positives = 76/166 (45%)
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVD 234
+ ++ V +S + V+ G ++ +G++++GQ+ S+ + P + K +
Sbjct: 35 KNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLA 94
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
V G + + ++G VY+ G G LG G R+ + S QH K++
Sbjct: 95 VC-GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLI--SFFTNQH------KIK 145
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
L AG T A+T G L++WG N GQ+GL P +V VG
Sbjct: 146 QLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVG 191
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 277 (102.6 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 80/253 (31%), Positives = 126/253 (49%)
Query: 92 FGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G +SFGQ G G I+ E G F H+ + + CG +H++FL E G+V
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYG--FIHD------RNVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH + P V G + G+ IV ++ +A+SD+G VF WG
Sbjct: 56 YTCGLNTKGQ--LGHESEGSKPAWV-GTLAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 207 YGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ + ++ ++ PR++ + + I+ ++ G C L +G ++WG YG LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQT-ILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V + G +F A++ G ++ WGKN GQLG
Sbjct: 172 GKECPSQASPQRVKS-LDGI----PLAQVAA--GGAHSF-ALSLSGAVFGWGKNSSGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L D+ P V
Sbjct: 224 LSDERDRESPCHV 236
Score = 261 (96.9 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 78/270 (28%), Positives = 130/270 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + W + L G+ I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH---ESEGSKPAW----VGTLAGQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAVD 188
CG+ H++ L++ G+V+S G G+DGQ GL + + T P L++ ++ + I+++S
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + YGQ+ E Q S RV S G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G R + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 211 (79.3 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 69/260 (26%), Positives = 124/260 (47%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ K P ++V L
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGHESEGSK--P-----AWVGT-LAG 83
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+H I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 84 QH----IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + +
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ A+S G VFGWG + GQ+ S E +P + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQ 261
+L G V+++G G GQ
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ 273
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 73/271 (26%), Positives = 127/271 (46%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I H+A G +H++ ++D F++G S GQ G +++ + I L + I+
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLNQQTILQ 141
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + ++++
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGA 200
Query: 189 CVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+S G VFGWG + GQ+ S E +P + + ++V ++ G +L
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTK 259
Query: 248 EGLVYSWGYGLLGQ-G-PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TFGAIT 304
G V+++G G GQ G ++ + P + L G S+V + G T +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMG-------SEVSQIACGRHHTLAFVP 311
Query: 305 NFGHLYMWGKNQYGQLGLG-TVEDQ-PFPLK 333
+ G +Y +G GQLG G T + P P+K
Sbjct: 312 SSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 202 (76.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 50/148 (33%), Positives = 76/148 (51%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG D R + +P + + +R S ++ +++ G HT V+T +
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKL--LR--------SQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G G GQ G GH N + P V+G
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 39 (18.8 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
+S G+ L G KV +PT + + + G +N + ES +
Sbjct: 909 FSTGF-LKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAV 950
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 98/313 (31%), Positives = 140/313 (44%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG P +L F + S IK + G H++V+TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQL-SDFCK--------SGCIKSVTGGGGHSVVVTDG 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
G F G N GQ G G E+ C L G I CG D T+ LTE G+V
Sbjct: 68 GGLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLLGCPIRQVACGWDFTIMLTEKGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG A GQ G+ H + C+V IE E++V +++ + LA +D G F WG
Sbjct: 123 LSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGT 179
Query: 205 --SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWGYG 257
+ G+ ++ T + S+ G+ S +V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRN 239
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ ++ + P +P + H F + KV ++ +G A T G ++ WG+ Y
Sbjct: 240 KHGQLASLATFL-P--LPQRVEA-HYFQDE-KVTAVWSGWTHLVAKTETGKVFTWGRADY 294
Query: 318 GQLG--LGTVEDQ 328
GQLG LG+ E Q
Sbjct: 295 GQLGRTLGSPEAQ 307
Score = 176 (67.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 56/216 (25%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T +K ++ CG N+ QLG H PRK +P
Sbjct: 103 IRQVACGWDFTIMLT---EKG-QVLSCGSNAFGQLGVPHGPRK-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED---YQGKWFCHNI 119
++ ++ +A G H + TD F +G GR + ++ + +
Sbjct: 148 IECLREKVVCVAAGLRHALATTDTGSTFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGE-IEG 177
LE ++ AV G DH+ LT++G++Y WG + L L P V +
Sbjct: 207 TGLESSTVVCAVAGSDHSASLTDTGELYV--WGRNKHGQLASLATFLPLPQRVEAHYFQD 264
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
E++ + S ++A ++ G VF WG ++YGQ+ +
Sbjct: 265 EKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRT 300
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 267 (99.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 91/315 (28%), Positives = 146/315 (46%)
Query: 8 ACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS 67
AC +G + N ++F GLN + LG D + P +L L K
Sbjct: 24 ACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEA------LCGK--- 74
Query: 68 TQIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+I L+ G H ++ T++ + +G+N + Q G G + C N+ L+ K
Sbjct: 75 -KISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQ-GVTPVQVCTNLL-LK--K 129
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
+++ CG H++ L+ G +Y+ G+ GQ G G NQ TP V ++ + +V ++
Sbjct: 130 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACG 189
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+AV + G+V+GWG + GQ+ + Q+ TP ++ GV I+ +A G +
Sbjct: 190 QTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHGVC-ILQIACGYAHTLA 247
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCT 299
L DEGL+Y+WG YG LG G K S + P I K +V + A T
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK-SNQLSPLQI---------MMEKERVVEIAACHSAHT 297
Query: 300 FGAITNFGHLYMWGK 314
A T G +YMWG+
Sbjct: 298 SAAKTQSGQVYMWGQ 312
Score = 262 (97.3 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 81/264 (30%), Positives = 117/264 (44%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
T I T N+ F FG N G G D Q + L G+KI G
Sbjct: 29 TSANEAIYTTHNDEVFVFGLNCSNCLGTG-----DSQSTIVPKKLEALCGKKISSLSYGS 83
Query: 135 D-HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
H L TE G+VY+ WG +G Q G G N TP V + +++++++ +
Sbjct: 84 GPHVLLCTEDGEVYA--WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSM 141
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+S GD++ WG + GQ+ S S TPR +S C +V +A G ++ + + G
Sbjct: 142 ALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGE 201
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
VY WGY G G + L P + H + + G A+T+ G LY
Sbjct: 202 VYGWGYN--GNGQLGLGNNGNQLTPCRVAALHGVC----ILQIACGYAHTLALTDEGLLY 255
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKV 334
WG N YGQLG G +Q PL++
Sbjct: 256 AWGANTYGQLGTGNKSNQLSPLQI 279
Score = 187 (70.9 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 59/206 (28%), Positives = 99/206 (48%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE---GERIVKLS-SAVDCV 190
+ ++ T + +V+ G G G ++Q T +V ++E G++I LS + V
Sbjct: 32 NEAIYTTHNDEVFVFGLNCSNCLGTG--DSQST--IVPKKLEALCGKKISSLSYGSGPHV 87
Query: 191 LAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
L ++ G+V+ WG++ Y Q+ Q TP + + ++++VA G L+ +G
Sbjct: 88 LLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 147
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+Y+WGY GQ S + +PT P + Q V + G + A+ N G +
Sbjct: 148 DLYAWGYNNCGQVGSGSTANQPT--PRRVSNCLQ---DKMVVGIACGQTSSMAVVNNGEV 202
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVA 335
Y WG N GQLGLG +Q P +VA
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVA 228
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 266 (98.7 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 81/267 (30%), Positives = 125/267 (46%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD- 135
+ I +TD++ F FG N + C G G D Q + L G++I G
Sbjct: 32 SEAIYVTDSDEVFVFGLN-YSNCLGTG-----DNQSTLVPKKLEALCGKRIKSLSYGSGP 85
Query: 136 HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAV 193
H L TE G VY+ WG +G Q G G N P V + +++V+++ +A+
Sbjct: 86 HVLLSTEDGVVYA--WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL 143
Query: 194 SDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ G++F WG + GQ+ S S TPR ++ C ++V++A G ++ + D G VY
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVY 203
Query: 253 SWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
WGY G LG G + P + + L G V ++ G A+T+ G L
Sbjct: 204 GWGYNGNGQLGLGNN-GNQLTPVRV-AALHGVC-------VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WG N YGQLG G+ + P ++ V
Sbjct: 255 YAWGANTYGQLGTGSKNNLLSPTQIMV 281
Score = 265 (98.3 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 74/254 (29%), Positives = 124/254 (48%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G + C N+ +++
Sbjct: 75 RIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-GIAPIQVCTNLLV---KQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G++++ G+ GQ G G NQ TP V + +++V ++
Sbjct: 131 VEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+AV D G+V+GWG + GQ+ + Q++ RV + GV + + G + L
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHGVC-VNQIVCGYAHTLAL 248
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--GPCTF 300
DEGL+Y+WG YG LG G K + + PT I K +V + A T
Sbjct: 249 TDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI---------MVEKERVIEIAACHSTHTS 298
Query: 301 GAITNFGHLYMWGK 314
A T GH+YMWG+
Sbjct: 299 AAKTQGGHVYMWGQ 312
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 72/235 (30%), Positives = 115/235 (48%)
Query: 112 GKWFCHNI-ADLEGEKIMDA-VCG--QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET 167
GKW + + E I A V G +++T+S +V+ G G G +NQ T
Sbjct: 5 GKWPIFTLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTG--DNQST 62
Query: 168 PCLVRGEIE---GERIVKLS--SAVDCVLAVSDKGDVFGWGNSEYGQISE--SEMQISTP 220
LV ++E G+RI LS S +L+ D G V+ WG++ Y Q+ + I+
Sbjct: 63 --LVPKKLEALCGKRIKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPI 119
Query: 221 RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
+V + V ++V+VA G L +G +++WGY GQ S + +PT P +
Sbjct: 120 QVCTNLL-VKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPT--PRKV-- 174
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
+ + K KV ++ G + A+ + G +Y WG N GQLGLG +Q P++VA
Sbjct: 175 TNCLHTK-KVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVA 228
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 47/166 (28%), Positives = 75/166 (45%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ +IACG ++ S + ++G G N + QLG + GN L + VR+
Sbjct: 182 KVVNIACGQTSSMAVLDSGE----VYGWGYNGNGQLGLGN---NGNQL----TPVRVA-- 228
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H + + G AHT+ +TD + +G N++GQ G G + +
Sbjct: 229 ALH-GVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS------KNNLLSPTQIMV 281
Query: 123 EGEKIMD-AVCGQDHTLFL-TESGKVYSCGWG-ADGQTG-LGHLNN 164
E E++++ A C HT T+ G VY WG GQ+ L HL +
Sbjct: 282 EKERVIEIAACHSTHTSAAKTQGGHVYM--WGQCRGQSVILPHLTH 325
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 266 (98.7 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 81/267 (30%), Positives = 119/267 (44%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
T + +TD++ F FG N + C G G D + L G+KI G
Sbjct: 29 TSANEALYVTDSDEVFVFGLN-YSSCLGTG-----DNHSTLVPKKLEALCGKKIKSLSYG 82
Query: 134 QD-HTLFLTESGKVYSCGWGADG--QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
H L TE G VY+ WG +G Q G G N P V + +++V+++
Sbjct: 83 SGPHVLLSTEDGVVYA--WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHS 140
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+A++ G+VF WG + GQ+ S S TPR ++ C + R+V +A G ++ + D G
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
VY WGY G G + L P + H V ++ G A+T+ G L
Sbjct: 201 EVYGWGYN--GNGQLGLGNNGNQLTPVRVAALHSVC----VNQIVCGYAHTLALTDEGLL 254
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKVAV 336
Y WG N YGQLG G + P + V
Sbjct: 255 YAWGANTYGQLGTGNKNNLLSPAHIMV 281
Score = 259 (96.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 80/258 (31%), Positives = 127/258 (49%)
Query: 69 QIKHLATGRA-HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+IK L+ G H ++ T++ + +G+N + Q G G + C N+ +++
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-GLAPIQVCTNLLI---KQV 130
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
++ CG H++ L G+V++ G+ GQ G G NQ TP V + +R+V ++
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVL---SQCKGVSRIVDVASGGSAC 242
+AV D G+V+GWG + GQ+ + Q++ RV S C V++IV G A
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC--VNQIVC----GYAH 244
Query: 243 TM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA--G 296
T+ L DEGL+Y+WG YG LG G K + + P H K +V + A
Sbjct: 245 TLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPA---------HIMVEKERVIEIAACHS 294
Query: 297 PCTFGAITNFGHLYMWGK 314
T A T GH+YMWG+
Sbjct: 295 AHTSAAKTQGGHVYMWGQ 312
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ IACG ++ N +++G G N + QLG + GN L + VR+
Sbjct: 182 RVVGIACGQTSSMAVLD----NGEVYGWGYNGNGQLGLGN---NGNQL----TPVRVA-- 228
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H S + + G AHT+ +TD + +G N++GQ G G + + H + +
Sbjct: 229 ALH-SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--NKNNLLSP--AHIM--V 281
Query: 123 EGEKIMD-AVCGQDHTLFL-TESGKVYSCGWG-ADGQT-GLGHLNN 164
E E++++ A C HT T+ G VY WG GQ+ L HL +
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYM--WGQCRGQSVTLPHLTH 325
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 75/246 (30%), Positives = 122/246 (49%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+G++ GQ G G + ++ + C + D G + + CG H+LFL G VY+CG
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCC--VFD--GRGLKEVACGNQHSLFLLHDGSVYTCGS 60
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
+ GQ LGH P LV G ++ ++I +S LAV+++G VF WG + GQ+
Sbjct: 61 NSCGQ--LGHDKGGSRPELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLG 117
Query: 212 --ESEMQISTPRVLSQ-CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
+E + PR++ + C+ RI V G C L+ +G ++ WG GQ + +
Sbjct: 118 LGTAEEAVRVPRLIKKLCE--HRISQVMCGNHHCIALSKDGQLFVWGENSSGQ-LGLGKG 174
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
TL P L P +++ + G +F A++ G ++ WGKN GQLGL +D+
Sbjct: 175 EPSTLSPQPLKSLCGI-PLTQISA--GGDHSF-ALSFSGAVFGWGKNSAGQLGLNDEQDR 230
Query: 329 PFPLKV 334
P +
Sbjct: 231 AVPCHI 236
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 74/268 (27%), Positives = 122/268 (45%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + + +T G+NS GQ G +G + L+ +KI
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHD-------KGGSRPELVGALDAQKISG 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CGQ H+L + E G+V++ G G GQ GLG P L++ E RI ++
Sbjct: 89 VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNH 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSACTMLN 246
+A+S G +F WG + GQ+ + + ST P+ L G+ + +++GG L+
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIP-LTQISAGGDHSFALS 206
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G V+ WG GQ + +P + +F KV + G A+T
Sbjct: 207 FSGAVFGWGKNSAGQ--LGLNDEQDRAVPCHI----KFLRSQKVVYISCGEEHTAALTKE 260
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G L+ +G GQLG + ++P P +V
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRRV 288
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 66/259 (25%), Positives = 115/259 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG ++ ++ CG NS QLG HD K G+ ELV +
Sbjct: 36 LKEVACGNQHSLFLLHDGS----VYTCGSNSCGQLG-HD--KGGSRPELVGAL------- 81
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ +I ++ G+AH++ + + F +G GQ G G +E + I L
Sbjct: 82 --DAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRL----IKKLC 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+I +CG H + L++ G+++ G + GQ GLG + G + ++
Sbjct: 136 EHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S+ D A+S G VFGWG + GQ+ E + P + + ++V ++ G
Sbjct: 196 SAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHT 254
Query: 243 TMLNDEGLVYSWGYGLLGQ 261
L EG ++++G G GQ
Sbjct: 255 AALTKEGGLFTFGNGSKGQ 273
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 66/269 (24%), Positives = 117/269 (43%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I ++ G+AH++ + + F +G GQ G G +E + I L +I
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRL----IKKLCEHRIS 140
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
+CG H + L++ G+++ G + GQ GLG + G + ++S+ D
Sbjct: 141 QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGD 200
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
A+S G VFGWG + GQ+ E + P + + ++V ++ G L
Sbjct: 201 HSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHTAALTK 259
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC-TFGAITNF 306
EG ++++G G GQ S +P +P + ++V + G T + +
Sbjct: 260 EGGLFTFGNGSKGQLGHDSTRNEP--LPRRVMELMG----TEVSQIACGRNHTLAFVPST 313
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G +Y +G N GQLG G P+ V+
Sbjct: 314 GLIYAFGCNTQGQLGTGIRGSAKSPVPVS 342
Score = 193 (73.0 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 69/274 (25%), Positives = 121/274 (44%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI+ ++CG ++ + ++F G QLG G E V R+P
Sbjct: 85 KISGVSCGQAHSLAVNEQG----QVFAWGAGDGGQLGL------GTAEEAV----RVPRL 130
Query: 63 VKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
+K +I + G H I ++ + F +G NS GQ G G + + +
Sbjct: 131 IKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQ----PLKS 186
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGER 179
L G + G DH+ L+ SG V+ GWG + GQ GL ++ PC ++ + ++
Sbjct: 187 LCGIPLTQISAGGDHSFALSFSGAVF--GWGKNSAGQLGLNDEQDRAVPCHIKF-LRSQK 243
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASG 238
+V +S + A++ +G +F +GN GQ+ +S PR + + G + + +A G
Sbjct: 244 VVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMG-TEVSQIACG 302
Query: 239 GS-ACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMK 270
+ + GL+Y++G GQ G + S K
Sbjct: 303 RNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAK 336
Score = 179 (68.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 44/143 (30%), Positives = 71/143 (49%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG +D + + P + F+R S ++ +++ G HT +T
Sbjct: 211 VFGWGKNSAGQLGLNDEQDRAVPCHI--KFLR--------SQKVVYISCGEEHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFGN S GQ G + E + + +L G ++ CG++HTL F+ +G
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRR-----VMELMGTEVSQIACGRNHTLAFVPSTGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETP 168
+Y+ G GQ G G + ++P
Sbjct: 316 IYAFGCNTQGQLGTGIRGSAKSP 338
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 85/248 (34%), Positives = 122/248 (49%)
Query: 92 FGNNSFGQCGRGIVQEE---DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+GN SFGQ G G + EE + + F N +K+ D CG HT+F+ + G VY+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN------KKVRDVGCGLRHTVFVLDDGTVYT 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG G
Sbjct: 58 CGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 209 QIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
Q+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P LI S L G P +V + G +F +T G ++ WG+N++GQLGL
Sbjct: 174 DCKKQASPQLIKS-LLGI----PFMQVAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 257 (95.5 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 78/274 (28%), Positives = 135/274 (49%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S L Q K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKS-LRTQ-------KIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 227 (85.0 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 80/276 (28%), Positives = 129/276 (46%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV D ++ CG N QLG+ RKK P ++V L
Sbjct: 35 KVRDVGCGLRHTVFVL---DDGT-VYTCGCNDLGQLGHEKSRKK--PEQVVA------LD 82
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 83 AQN----IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSS--AVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASG 238
++++ A VL +S G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLS--GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCG 250
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP 271
L EG V+++G YG LG S + P
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHN-STSHEINP 285
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 77/271 (28%), Positives = 127/271 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G AHT+ + D + +G +S GQ G + EE + NI L +I+ C
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSLSDIQIVQVAC 144
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSS--AVDC 189
G H+L L+++ +V+ G GQ GLG Q +P L++ + G +++++ A
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFMQVAAGGAHSF 203
Query: 190 VLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
VL +S G +FGWG +++GQ+ E P +L + +IV + G L E
Sbjct: 204 VLTLS--GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKE 260
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAIT 304
G V+++G YG LG S + P + L G S V + G T +
Sbjct: 261 GGVFTFGAGGYGQLGHN-STSHEINPRKV-FELMG-------SIVTQIACGRQHTSAFVP 311
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
+ G +Y +G GQLG G+ ++ PF +K
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 185 (70.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S +R + +I ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVP-NLLKS-LR--------TQKIVYICCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ SG+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSIVTQIACGRQHTSAFVPSSGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 79/253 (31%), Positives = 126/253 (49%)
Query: 92 FGNNSFGQCGRG-----IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G +SFGQ G G I+ E G F H+ + + CG +H++FL E G+V
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYG--FIHD------RNVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH + P + G + G+ IV ++ +A+SD+G VF WG
Sbjct: 56 YTCGLNTKGQ--LGHESEGSKPEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 207 YGQISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ + ++ ++ PR++ + + I+ ++ G C L +G ++WG YG LG
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQT-ILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V + G +F A++ G ++ WGKN GQLG
Sbjct: 172 GKECPSQASPQRVKS-LDGI----PLAQVAA--GGAHSF-ALSLSGAVFGWGKNSSGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L D+ P V
Sbjct: 224 LSDERDRESPCHV 236
Score = 250 (93.1 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 78/270 (28%), Positives = 130/270 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L G+ I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH---ESEGSKPE----PIGALAGQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAVD 188
CG+ H++ L++ G+V+S G G+DGQ GL + + T P L++ ++ + I+++S
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + YGQ+ E Q S RV S G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G R + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 219 (82.2 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 67/260 (25%), Positives = 122/260 (46%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ ++ACG +V + + ++ CGLN+ QLG+ K P+ +
Sbjct: 36 VKEVACGGNHSVFLLEDGE----VYTCGLNTKGQLGHESEGSKPEPIGALAG-------- 83
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+H I H+A G +H++ ++D F++G S GQ G +++ + I L
Sbjct: 84 QH----IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL----IKKLN 135
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVK 182
+ I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G + +
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDGIPLAQ 194
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSA 241
+++ A+S G VFGWG + GQ+ S E +P + + ++V ++ G
Sbjct: 195 VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQ 261
+L G V+++G G GQ
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ 273
Score = 209 (78.6 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 76/282 (26%), Positives = 132/282 (46%)
Query: 60 PLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P P+ + Q I H+A G +H++ ++D F++G S GQ G +++ +
Sbjct: 75 PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL---- 130
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEG 177
I L + I+ CG H L L G+ ++ G + GQ GLG +Q +P V+ ++G
Sbjct: 131 IKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS-LDG 189
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVA 236
+ ++++ A+S G VFGWG + GQ+ S E +P + + ++V ++
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYIS 248
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQ-G-PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G +L G V+++G G GQ G ++ + P + L G S+V +
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMG-------SEVSQIA 300
Query: 295 AGPC-TFGAITNFGHLYMWGKNQYGQLGLG-TVEDQ-PFPLK 333
G T + + G +Y +G GQLG G T + P P+K
Sbjct: 301 CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 202 (76.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 50/148 (33%), Positives = 76/148 (51%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G NS QLG D R + +P + + +R S ++ +++ G HT V+T +
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKL--LR--------SQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVSQIACGRHHTLAFVPSSGM 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G G GQ G GH N + P V+G
Sbjct: 316 IYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 39 (18.8 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
+S G+ L G KV +PT + + + G +N + ES +
Sbjct: 909 FSTGF-LKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAV 950
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 86/256 (33%), Positives = 126/256 (49%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADL-EGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+GN S+GQ G G + EE +D +K+ D CG HT+F+ + G VY+CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEP----RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG GQ+
Sbjct: 60 CNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 211 S--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
SE I PR + + +IV VA G L+ V+ WG YG LG G +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ P LI S L G P +V + G +F +T G ++ WG+N++GQLGL
Sbjct: 176 QKQTSPQLIKS-LLGI----PFMQVAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 326 EDQPFP-LKVAVGGQK 340
D+ P L ++ QK
Sbjct: 228 NDRYVPNLLKSLRSQK 243
Score = 260 (96.6 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 78/273 (28%), Positives = 133/273 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S L Q K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKS-LRSQ-------KIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 91/318 (28%), Positives = 148/318 (46%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG N QLG+ RKK P ++V L ++ I ++ G AHT+ + D
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVA------LDAQN----IVAVSCGEAHTLALNDK 102
Query: 87 EGAFTFGNNSFGQCG-RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +G +S GQ G +G EE + NI L +I+ CG H+L L+++ +
Sbjct: 103 GQVYAWGLDSDGQLGLQG--SEECIRVP---RNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSS--AVDCVLAVSDKGDVFGW 202
V+ G GQ GLG Q +P L++ + G +++++ A VL +S G +FGW
Sbjct: 158 VFCWGQNKYGQLGLGIECQKQTSPQLIKSLL-GIPFMQVAAGGAHSFVLTLS--GAIFGW 214
Query: 203 GNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
G +++GQ+ E P +L + +IV + G L EG V+++G YG
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQY 317
LG S + P + L G S V + G T + + G +Y +G
Sbjct: 274 LGHN-STSHEINPRKV-FELMG-------SIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 318 GQLGLGTVEDQ--PFPLK 333
GQLG G+ ++ PF +K
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
Score = 231 (86.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 76/263 (28%), Positives = 122/263 (46%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++CG T+ DK +++ GL+SD QLG +G+ +R+P +
Sbjct: 86 IVAVSCGEAHTLALN---DKG-QVYAWGLDSDGQLGL-----QGSE-----ECIRVPRNI 131
Query: 64 KHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K S QI +A G H++ ++ F +G N +GQ G GI + Q + I L
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI----ECQKQTSPQLIKSL 187
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERI 180
G M G H+ LT SG ++ GWG + GQ GL N++ P L++ + ++I
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIF--GWGRNKFGQLGLNDENDRYVPNLLKS-LRSQKI 244
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
V + D A++ +G VF +G YGQ+ + PR + + G S + +A G
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG-SIVTQIACGR 303
Query: 240 S-ACTMLNDEGLVYSWGYGLLGQ 261
+ G +YS+G G GQ
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQ 326
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 50/148 (33%), Positives = 72/148 (48%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S +R S +I ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVP-NLLKS-LR--------SQKIVYICCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ SG+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSIVTQIACGRQHTSAFVPSSGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 85/248 (34%), Positives = 122/248 (49%)
Query: 92 FGNNSFGQCGRGIVQEE---DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+GN SFGQ G G + EE + + F N +K+ D CG HT+F+ + G VY+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN------KKVRDVGCGLRHTVFVLDDGTVYT 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG G
Sbjct: 58 CGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 209 QIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
Q+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P LI S L G P +V + G +F +T G ++ WG+N++GQLGL
Sbjct: 174 DCKKQASPQLIKS-LLGI----PFMQVAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 257 (95.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 78/274 (28%), Positives = 135/274 (49%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-PQLIKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S L Q K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKS-LRTQ-------KIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 227 (85.0 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 80/276 (28%), Positives = 129/276 (46%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV D ++ CG N QLG+ RKK P ++V L
Sbjct: 35 KVRDVGCGLRHTVFVL---DDGT-VYTCGCNDLGQLGHEKSRKK--PEQVVA------LD 82
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 83 AQN----IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSS--AVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASG 238
++++ A VL +S G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QVAAGGAHSFVLTLS--GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCG 250
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP 271
L EG V+++G YG LG S + P
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHN-STSHEINP 285
Score = 221 (82.9 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 77/271 (28%), Positives = 127/271 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G AHT+ + D + +G +S GQ G + EE + NI L +I+ C
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSLSDIQIVQVAC 144
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSS--AVDC 189
G H+L L+++ +V+ G GQ GLG Q +P L++ + G +++++ A
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFMQVAAGGAHSF 203
Query: 190 VLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
VL +S G +FGWG +++GQ+ E P +L + +IV + G L E
Sbjct: 204 VLTLS--GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKE 260
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAIT 304
G V+++G YG LG S + P + L G S V + G T +
Sbjct: 261 GGVFTFGAGGYGQLGHN-STSHEINPRKV-FELMG-------SIVTQIACGRQHTSAFVP 311
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
+ G +Y +G GQLG G+ ++ PF +K
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 185 (70.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S +R + +I ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVP-NLLKS-LR--------TQKIVYICCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ SG+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSIVTQIACGRQHTSAFVPSSGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 259 (96.2 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 88/319 (27%), Positives = 144/319 (45%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+F G N LG H P K E + S V+ VK I A G H + + D
Sbjct: 59 MFTWGWNQRGTLG-HQPETK---TENIPSRVKALANVK-----ITQAAIGGWHCLAVDDQ 109
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE--GEK--IMDAVCGQDHTLFLTE 142
A+ +G N +GQCG +++E G+ +I + K + G H++ LT
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKDE--MGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTR 167
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V++ WG G + P V+G +E R++ + + + LA+ + G + W
Sbjct: 168 EGHVWT--WGQPWPPG--DIKQISVPVRVQG-LENVRLIAVGAFHN--LALEEDGRLLAW 220
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
GN+EYGQ+ + Q ++ V Q +VD+A+GG T L D+G VY WG +G L
Sbjct: 221 GNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRL 280
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQ 319
G G +S K ++P + + + + G A+T G ++ +G+ +G+
Sbjct: 281 GLGDN-DKSSK--MVPQKV----NLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Query: 320 LGLG--TVEDQPFPLKVAV 336
LG G QP L + +
Sbjct: 334 LGYGRKVTTGQPLELPIKI 352
Score = 213 (80.0 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 69/254 (27%), Positives = 110/254 (43%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGW 151
+G+ GQ G G +E++ W C + LE + V G ++L + + G +++ GW
Sbjct: 10 WGSGEDGQLGIGTNEEKE----WACV-VEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW 64
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV----DCVLAVSDKGDVFGWGNSEY 207
G LGH +T + ++ VK++ A C LAV D+G + WG +EY
Sbjct: 65 NQRGT--LGHQPETKTEN-IPSRVKALANVKITQAAIGGWHC-LAVDDQGRAYAWGGNEY 120
Query: 208 GQISESEMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
GQ E ++ R + +C + VA+GG+ +L EG V++WG
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ---- 176
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
P +K +P + G V + G A+ G L WG N+YGQL
Sbjct: 177 --PWPPGDIKQISVPVRVQGLEN------VRLIAVGAFHNLALEEDGRLLAWGNNEYGQL 228
Query: 321 GLGTVEDQPFPLKV 334
G G + P+ V
Sbjct: 229 GTGDTQPTSHPVPV 242
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 48/174 (27%), Positives = 82/174 (47%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+ + G G DGQ G+G +E C+V +E + + S LA+ D G +F WG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEA-LEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 206 EYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
+ G + + + T + S+ K ++ +I A GG C ++D+G Y+WG YG G
Sbjct: 66 QRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
+ P +P + + + PK V + AG +T GH++ WG+
Sbjct: 125 EEPLKDEMGRP--VRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Score = 159 (61.0 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 64/264 (24%), Positives = 117/264 (44%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + +G +++ I D+ FT+G N G G + + + + + L KI
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGH----QPETKTENIPSRVKALANVKITQ 95
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER------IVKL 183
A G H L + + G+ Y+ G GQ G L ++ + R + +R + ++
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQV 155
Query: 184 SSAVDCVLAVSDKGDVFGWGNS-EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
++ + ++ +G V+ WG G I QIS P + +G+ + +A G
Sbjct: 156 AAGGTHSVVLTREGHVWTWGQPWPPGDIK----QISVP---VRVQGLENVRLIAVGAFHN 208
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
L ++G + +WG YG LG G +PT P + G + + AG
Sbjct: 209 LALEEDGRLLAWGNNEYGQLGTG-----DTQPTSHPVPVQGLDDLT----LVDIAAGGWH 259
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+T+ G +Y WG+ ++G+LGLG
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGLG 283
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 270 (100.1 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 84/248 (33%), Positives = 126/248 (50%)
Query: 92 FGNNSFGQCGRGIVQEE---DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+GN SFGQ G G + EE + + F N ++I D CG HT+F+ + G VY+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLN------KRIRDVGCGLRHTVFVLDDGTVYT 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LGH ++ P V G ++ + IV +S LA++DKG V+ WG + G
Sbjct: 58 CGCNDLGQ--LGHEKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 209 QIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
Q+ +E I PR + + +IV VA G L+ V+SWG YG LG G
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY 173
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ + P +I S L G P +++ + G +F +T G ++ WG+N++GQLGL
Sbjct: 174 EYKKQNSPHVIKS-LLGI----PFAQIAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DDNDRYVP 233
Score = 260 (96.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 80/273 (29%), Positives = 130/273 (47%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I+ + G HT+ + D+ +T G N GQ G ++ ++ L+ + I+
Sbjct: 35 RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP-------EHVGALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G DGQ GL G P ++ E + IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQ-IVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ E + Q ++P V+ G+ +A+GG+ +
Sbjct: 147 YHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ-NSPHVIKSLLGIP-FAQIAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG R + PTL+ S L Q KV + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDDNDRYV-PTLLKS-LRTQ-------KVVHICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 226 (84.6 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 86/317 (27%), Positives = 143/317 (45%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG N QLG+ RK+ P E V + + I ++ G AHT+ + D
Sbjct: 55 VYTCGCNDLGQLGHEKARKR--P-EHVGAL---------DAQNIVAVSCGEAHTLALNDK 102
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +G + GQ G +E + NI L +I+ CG H+L L++ +V
Sbjct: 103 GQVYAWGLATDGQLGLPGTEECIRVPR----NIKSLSEIQIVQVACGYYHSLALSKGSEV 158
Query: 147 YSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSS--AVDCVLAVSDKGDVFGWG 203
+S G GQ GLG+ Q +P +++ + G ++++ A VL +S G +FGWG
Sbjct: 159 FSWGQNKYGQLGLGYEYKKQNSPHVIKSLL-GIPFAQIAAGGAHSFVLTLS--GAIFGWG 215
Query: 204 NSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+++GQ+ + P +L + ++V + G L EG V+++G YG L
Sbjct: 216 RNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYG 318
G S + P + L G S V + G T + + G +Y +G G
Sbjct: 275 GHN-STSHEINPRKV-FELMG-------SLVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325
Query: 319 QLGLGTVEDQ--PFPLK 333
QLG GT ++ PF +K
Sbjct: 326 QLGTGTTSNRKSPFTVK 342
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 61/210 (29%), Positives = 97/210 (46%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
I+I +ACGY ++ +K + +F G N QLG KK N ++ S + IP
Sbjct: 137 IQIVQVACGYYHSLALSKGSE----VFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD 121
QI A G AH+ V+T + F +G N FGQ G D ++ +
Sbjct: 193 ------AQI---AAGGAHSFVLTLSGAIFGWGRNKFGQLGLN-----DDNDRYVPTLLKS 238
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L +K++ CG+DHT LT+ G V++ G G GQ G +++ P V E+ G +
Sbjct: 239 LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF-ELMGSLVT 297
Query: 182 KLSSAVDCVLA-VSDKGDVFGWGNSEYGQI 210
+++ A V G ++ +G GQ+
Sbjct: 298 QITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Score = 192 (72.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 49/149 (32%), Positives = 70/149 (46%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQ-IKHLATGRAHTIVITD 85
+FG G N QLG +D + +P +K TQ + H+ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDDNDR-----------YVPTLLKSLRTQKVVHICCGEDHTAALTK 259
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESG 144
G FTFG +GQ G E K F +L G + CG+ HT F+ SG
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSLVTQITCGRQHTTAFVPSSG 314
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRG 173
++YS G G +GQ G G +N+++P V+G
Sbjct: 315 RIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 270 (100.1 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 84/248 (33%), Positives = 122/248 (49%)
Query: 92 FGNNSFGQCGRGIVQEE---DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+GN SFGQ G G + EE + + F N +K+ D CG HT+F+ + G VY+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN------KKVRDVGCGLRHTVFVLDDGTVYT 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG G
Sbjct: 58 CGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 209 QIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
Q+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P LI S L G P ++ + G +F +T G ++ WG+N++GQLGL
Sbjct: 174 DCKKQASPQLIKS-LLGI----PFMQIAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP 331
D+ P
Sbjct: 226 DENDRYVP 233
Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 77/274 (28%), Positives = 135/274 (49%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL L ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--LGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + +A+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS-PQLIKSLLGIP-FMQIAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S L Q K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKS-LRTQ-------KIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 228 (85.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 80/276 (28%), Positives = 129/276 (46%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ D+ CG TV D ++ CG N QLG+ RKK P ++V L
Sbjct: 35 KVRDVGCGLRHTVFVL---DDGT-VYTCGCNDLGQLGHEKSRKK--PEQVVA------LD 82
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ I ++ G AHT+ + D + +G +S GQ G + EE + NI L
Sbjct: 83 AQN----IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSL 134
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIV 181
+I+ CG H+L L+++ +V+ G GQ GLG Q +P L++ + G +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFM 193
Query: 182 KLSS--AVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASG 238
++++ A VL +S G +FGWG +++GQ+ E P +L + +IV + G
Sbjct: 194 QIAAGGAHSFVLTLS--GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCG 250
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKP 271
L EG V+++G YG LG S + P
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHN-STSHEINP 285
Score = 222 (83.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/271 (28%), Positives = 127/271 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G AHT+ + D + +G +S GQ G + EE + NI L +I+ C
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLDSDGQLGL-LGSEECIRVP---RNIKSLSDIQIVQVAC 144
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSS--AVDC 189
G H+L L+++ +V+ G GQ GLG Q +P L++ + G +++++ A
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL-GIPFMQIAAGGAHSF 203
Query: 190 VLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
VL +S G +FGWG +++GQ+ E P +L + +IV + G L E
Sbjct: 204 VLTLS--GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVYICCGEDHTAALTKE 260
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAIT 304
G V+++G YG LG S + P + L G S V + G T +
Sbjct: 261 GGVFTFGAGGYGQLGHN-STSHEINPRKV-FELMG-------SIVTQIACGRQHTSAFVP 311
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQ--PFPLK 333
+ G +Y +G GQLG G+ ++ PF +K
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 185 (70.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S +R + +I ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVP-NLLKS-LR--------TQKIVYICCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ SG+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSIVTQIACGRQHTSAFVPSSGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 269 (99.8 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 86/258 (33%), Positives = 127/258 (49%)
Query: 92 FGNNSFGQCGRGIVQEE---DYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+GN SFGQ G G + EE + + F N +++ D CG HT+F+ + G VY+
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN------KRVRDVGCGLRHTVFVLDDGTVYT 57
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYG 208
CG GQ LGH +++ P V ++ + IV +S LA++DKG V+ WG G
Sbjct: 58 CGCNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 209 QIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGP 263
Q+ SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT 173
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P L+ S L G P +V + G +F +T G ++ WG+N++GQLGL
Sbjct: 174 DCKKQTSPQLLKS-LLGI----PFMQVAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLN 225
Query: 324 TVEDQPFP-LKVAVGGQK 340
D+ P L ++ QK
Sbjct: 226 DENDRYVPNLLKSLRSQK 243
Score = 259 (96.2 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 78/274 (28%), Positives = 136/274 (49%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSA 186
CG+ HTL L + G+VY+ G +DGQ GL + ++E + R + +IV+++
Sbjct: 88 AVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--VGSEECIRVPRNIKSLSDIQIVQVACG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA+S +VF WG ++YGQ+ ++ + Q S P++L G+ + VA+GG+
Sbjct: 146 YYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIP-FMQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L G ++ WG +G LG + R + P L+ S L Q K+ + G
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKS-LRSQ-------KIVYICCGEDHT 254
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 238 (88.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 90/317 (28%), Positives = 147/317 (46%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG N QLG+ RKK P ++V L ++ I ++ G AHT+ + D
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVA------LDAQN----IVAVSCGEAHTLALNDK 102
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+ +G +S GQ G + EE + NI L +I+ CG H+L L+++ +V
Sbjct: 103 GQVYAWGLDSDGQLGL-VGSEECIRVP---RNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 147 YSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSS--AVDCVLAVSDKGDVFGWG 203
+ G GQ GLG Q +P L++ + G +++++ A VL +S G +FGWG
Sbjct: 159 FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-GIPFMQVAAGGAHSFVLTLS--GAIFGWG 215
Query: 204 NSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+++GQ+ E P +L + +IV + G L EG V+++G YG L
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYG 318
G S + P + L G S V + G T + + G +Y +G G
Sbjct: 275 GHN-STSHEINPRKV-FELMG-------SIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 319 QLGLGTVEDQ--PFPLK 333
QLG G+ ++ PF +K
Sbjct: 326 QLGTGSTSNRKSPFTVK 342
Score = 224 (83.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 80/288 (27%), Positives = 132/288 (45%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++CG T+ DK +++ GL+SD QLG G+ +R+P +
Sbjct: 86 IVAVSCGEAHTLALN---DKG-QVYAWGLDSDGQLGL-----VGSE-----ECIRVPRNI 131
Query: 64 KHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K S QI +A G H++ ++ F +G N +GQ G G D + + + L
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT----DCKKQTSPQLLKSL 187
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERI 180
G M G H+ LT SG ++ GWG + GQ GL N++ P L++ + ++I
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIF--GWGRNKFGQLGLNDENDRYVPNLLKS-LRSQKI 244
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
V + D A++ +G VF +G YGQ+ + PR + + G S + ++A G
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG-SIVTEIACGR 303
Query: 240 S-ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQ-HQFN 285
+ G +YS+G G GQ S S + + P T+ G + +N
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS--PFTVKGNWYPYN 349
Score = 193 (73.0 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 56/177 (31%), Positives = 83/177 (46%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S +R S +I ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVP-NLLKS-LR--------SQKIVYICCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + + CG+ HT F+ SG+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSIVTEIACGRQHTSAFVPSSGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGE---IEGERIVKLSSA-VDCVLAVSDKGD 198
+YS G G +GQ G G +N+++P V+G G+ + + S CV + GD
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGD 372
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 268 (99.4 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 78/253 (30%), Positives = 127/253 (50%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT V+T N + FG+N++GQ G G + K C + L+ EK+ A C
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTC--VKALKPEKVKFAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL TE GKVY+ G +GQ GLG + T L+ +I +LS+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G++F WG++ GQI E+ + P+ ++ K +S I + G + EG +
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI---SCGYYHSAFVTTEGQL 211
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
Y++G G+ ++ + +P + G P V+ G T +T +Y
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPGI----PGKVVQVACGGGHTV-VLTEKA-VYT 265
Query: 312 WGKNQYGQLGLGT 324
+G Q+GQLGLGT
Sbjct: 266 FGLGQFGQLGLGT 278
Score = 235 (87.8 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 87/321 (27%), Positives = 145/321 (45%)
Query: 5 TDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
T ++CG T V T N KL+ G N+ QLG P + V+ P K
Sbjct: 38 TFLSCGDEHTAVVTG----NNKLYMFGSNNWGQLGLGSKSTVSKP-----TCVKALKPEK 88
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
+K A GR HT+V T+ + G N+ GQ G G +E F H I+
Sbjct: 89 -----VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST----F-HLISFFTS 138
Query: 125 E-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
+ KI G + + LTE G+++ G ++GQ GL ++ N C+ + G+ I +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV---CVPQQVTVGKPISWI 195
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSAC 242
S V+ +G ++ +G E G++ + R+ G+ ++V VA GG
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHT 255
Query: 243 TMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+L ++ VY++G G GQ + + T +P + +H + K+ + G
Sbjct: 256 VVLTEKA-VYTFGLGQFGQ-LGLGTFLFETSVPKAI--EHIKD--QKISFIACGENHTAL 309
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLG 330
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 61/198 (30%), Positives = 96/198 (48%)
Query: 32 LNSDSQL-GYHDPR--KKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEG 88
+ ++ QL + +P K G P +L+++ R+P PV ++ +A G HT+V+T+ +
Sbjct: 205 VTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE-KA 262
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+TFG FGQ G G E K H ++ +KI CG++HT +T+ G +Y+
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEH----IKDQKISFIACGENHTALITDMGLMYT 318
Query: 149 CGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G G G+ GLG N NQ P L + IV+L S C V + G E
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRF--IVQLVSCGGCHTLVFATPRLGGTEEME 376
Query: 207 YGQISESEMQISTPRVLS 224
+I++S +T LS
Sbjct: 377 LKEINKSCFSAATSLSLS 394
Score = 137 (53.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 51/160 (31%), Positives = 76/160 (47%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ +S P + K V A+ G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEK--VKFAACGRN 97
Query: 242 CTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ EG VY+ G G LG G RS LI F F + K++ L AG
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFH-LIS---F----FTSQRKIKQLSAGS 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL V + P +V VG
Sbjct: 150 NTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 85/256 (33%), Positives = 125/256 (48%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIADL-EGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+GN S+GQ G G + EE +D +K+ D CG HT+F+ + G VY+CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEP----RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
GQ LGH +++ P V ++ + IV ++ LA++DKG V+ WG GQ+
Sbjct: 60 CNDLGQ--LGHEKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 211 S--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV 265
SE I PR + + +IV VA G L+ V+ WG YG LG G
Sbjct: 117 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ P LI S L G P +V + G +F +T G ++ WG+N++GQLGL
Sbjct: 176 QKQTSPQLIKS-LLGI----PFMQVAA--GGAHSF-VLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 326 EDQPFP-LKVAVGGQK 340
D+ P L ++ QK
Sbjct: 228 NDRYVPNLLKSLRSQK 243
Score = 259 (96.2 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 77/273 (28%), Positives = 133/273 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ + G HT+ + D+ +T G N GQ G +++ Q + L+ + I+
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQ-------VVALDAQNIV 87
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG+ HTL L + G+VY+ G +DGQ GL G P ++ + +IV+++
Sbjct: 88 AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS-LSDIQIVQVACGY 146
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+S +VF WG ++YGQ+ + + Q S P+++ G+ + VA+GG+ +
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIP-FMQVAAGGAHSFV 204
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G ++ WG +G LG + R + P L+ S L Q K+ + G
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYV-PNLLKS-LRSQ-------KIVYICCGEDHTA 255
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ +G YGQLG + + P KV
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 240 (89.5 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 92/318 (28%), Positives = 148/318 (46%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ CG N QLG+ RKK P ++V L ++ I +A G AHT+ + D
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVA------LDAQN----IVAVACGEAHTLALNDK 102
Query: 87 EGAFTFGNNSFGQCG-RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ +G +S GQ G +G EE + NI L +I+ CG H+L L+++ +
Sbjct: 103 GQVYAWGLDSDGQLGLQG--SEECIRVP---RNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSS--AVDCVLAVSDKGDVFGW 202
V+ G GQ GLG Q +P L++ + G +++++ A VL +S G +FGW
Sbjct: 158 VFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-GIPFMQVAAGGAHSFVLTLS--GAIFGW 214
Query: 203 GNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
G +++GQ+ E P +L + +IV + G L EG V+++G YG
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQY 317
LG S + P + L G S V + G T + + G +Y +G
Sbjct: 274 LGHN-STSHEINPRKV-FELMG-------SIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 318 GQLGLGTVEDQ--PFPLK 333
GQLG G+ ++ PF +K
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 79/263 (30%), Positives = 122/263 (46%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I +ACG T+ DK +++ GL+SD QLG +G+ +R+P +
Sbjct: 86 IVAVACGEAHTLALN---DKG-QVYAWGLDSDGQLGL-----QGSE-----ECIRVPRNI 131
Query: 64 KHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K S QI +A G H++ ++ F +G N +GQ G GI D Q + I L
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI----DCQKQTSPQLIKSL 187
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERI 180
G M G H+ LT SG ++ GWG + GQ GL N++ P L++ + ++I
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIF--GWGRNKFGQLGLNDENDRYVPNLLKS-LRSQKI 244
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
V + D A++ +G VF +G YGQ+ + PR + + G S + VA G
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG-SIVTQVACGR 303
Query: 240 S-ACTMLNDEGLVYSWGYGLLGQ 261
+ G +YS+G G GQ
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQ 326
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/148 (33%), Positives = 72/148 (48%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G N QLG +D + P L+ S +R S +I ++ G HT +T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVP-NLLKS-LR--------SQKIVYICCGEDHTAALTKE 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT-LFLTESGK 145
G FTFG +GQ G E K F +L G + CG+ HT F+ SG+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVF-----ELMGSIVTQVACGRQHTSAFVPSSGR 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+YS G G +GQ G G +N+++P V+G
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 253 (94.1 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 90/321 (28%), Positives = 141/321 (43%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KLF G N LG H P K E S V+ VK I A G H + + D
Sbjct: 58 KLFTWGWNQRGTLG-HPPETK---TESTPSLVKSLANVK-----IVQAAIGGWHCLAVDD 108
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD----LEGEKIMDAVCGQDHTLFLT 141
A+ +G N +GQCG +D G+ +I + + G H++ LT
Sbjct: 109 QGRAYAWGGNEYGQCGEE--PSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V++ WG G + P V+G +E R++ + + + LA+ + G ++
Sbjct: 167 REGYVWT--WGQPWPPG--DIKQISVPVRVQG-LENVRLIAVGAFHN--LALKEDGTLWA 219
Query: 202 WGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
WGN+EYGQ+ + Q + + Q +VD+A+GG T L +EG VY WG +G
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 259 LGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G S M P + + L G+ + + G A+T G ++ +G+ +
Sbjct: 280 LGFGDNDKSSKMLPQKV-NLLAGED-------IIQVSCGGTHSVALTRDGRIFSFGRGDH 331
Query: 318 GQLGLG--TVEDQPFPLKVAV 336
G+LG G QP L + +
Sbjct: 332 GRLGYGRKVTTGQPLELPIHI 352
Score = 230 (86.0 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 71/254 (27%), Positives = 115/254 (45%)
Query: 92 FGNNSFGQCGRGIVQEEDYQGKWFCHNIAD-LEGEKIMDAVCGQDHTLFLTESGKVYSCG 150
+G+ GQ G G +E++ ++ D LE + V G ++L + + GK+++ G
Sbjct: 10 WGSGEDGQLGLGTDEEKELA------SVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 151 WGADGQTGLGH---LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
W G LGH + TP LV+ + +IV+ + LAV D+G + WG +EY
Sbjct: 64 WNQRGT--LGHPPETKTESTPSLVKS-LANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 208 GQISESEMQISTPR-------VLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
GQ E + T R + +C + VA+GG+ +L EG V++WG
Sbjct: 121 GQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ---- 176
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
P +K +P + G V + G A+ G L+ WG N+YGQL
Sbjct: 177 --PWPPGDIKQISVPVRVQGLEN------VRLIAVGAFHNLALKEDGTLWAWGNNEYGQL 228
Query: 321 GLGTVEDQPFPLKV 334
G G + + +P+ V
Sbjct: 229 GTGDTQPRSYPIPV 242
Score = 161 (61.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
+ + V + G G DGQ GLG +E +V +E + + LA+ D G +
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDA-LEPFNVRSVVGGSRNSLAICDDGKL 59
Query: 200 FGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG- 255
F WG ++ G + E++ + STP ++ V +IV A GG C ++D+G Y+WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTE-STPSLVKSLANV-KIVQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
YG G+ P + +P + + + + V + AG +T G+++ WG
Sbjct: 118 NEYGQCGEEPSKDETGRP--VRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
Query: 314 K 314
+
Sbjct: 176 Q 176
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 71/265 (26%), Positives = 113/265 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ + G +++ I D+ FT+G N G G + + + L KI+
Sbjct: 40 VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSL----VKSLANVKIVQ 95
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
A G H L + + G+ Y+ G GQ G + ET VR +I + V
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCG-EEPSKDETGRPVRRDIVIPKRCAQQLTVRQ 154
Query: 190 VLA-------VSDKGDVFGWGNS-EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
V A ++ +G V+ WG G I QIS P + +G+ + +A G
Sbjct: 155 VAAGGTHSVVLTREGYVWTWGQPWPPGDIK----QISVP---VRVQGLENVRLIAVGAFH 207
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L ++G +++WG YG LG G RS P IP + G + + AG
Sbjct: 208 NLALKEDGTLWAWGNNEYGQLGTGDTQPRSY-P--IP--VQGLDDLT----LVDIAAGGW 258
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
A+TN G +Y WG+ ++G+LG G
Sbjct: 259 HSTALTNEGEVYGWGRGEHGRLGFG 283
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 248 (92.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 78/276 (28%), Positives = 128/276 (46%)
Query: 59 IPLPVKHPSTQ---IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
+PLP + P + +K +A +G H + +T + F++G G+ G G D
Sbjct: 3059 VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-- 3116
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ L +KI D CG H+ ++ G++Y+ G G G+ G G Q P LV
Sbjct: 3117 ---RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA 3173
Query: 174 EIEGERIVKLS-SAVDC-VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVS 230
+ G R+V+++ + D LA+++ G VF WG+ ++G++ + S TP + + G+
Sbjct: 3174 -LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+V + G L G V++WG G LG G KP I L G+
Sbjct: 3233 -VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-QHVRKPQPIGG-LRGR------ 3283
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+V + G A+T+ G +Y WG N +GQ G G
Sbjct: 3284 -RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 240 (89.5 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 79/274 (28%), Positives = 120/274 (43%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
+K +A +G H + +T + +G G+ G G D + K H L G +
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEH----LNGMSV 4190
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
D CG H+ +T SG V + G G G+ G G +Q P LV + G R + ++ +
Sbjct: 4191 ADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL-GYRAIDIACGS 4249
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D +V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4250 GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVA 4308
Query: 245 LNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG G LG G V +P + + L G+ K+ S+ G
Sbjct: 4309 LTKSGAVYTWGKGDFHRLGHG-SVDHVRRPKKV-AALQGK-------KIISIATGSLHCV 4359
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A ++ G +Y WG N GQLG GTV P VA
Sbjct: 4360 ACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4393
Score = 226 (84.6 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 71/264 (26%), Positives = 126/264 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPS-TQIKHLATGRAHTIVIT 84
+++ G D +LG+ GN MS+ R P V+H + + +A G AH+ IT
Sbjct: 4156 EVYAWGEGEDGKLGH------GNR----MSYDR-PKLVEHLNGMSVADIACGSAHSAAIT 4204
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD--HTLFLTE 142
+ T+G +G+ G G E+ + K + L G + +D CG TL +T+
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGD-SEDQLRPKL----VEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
V+S G G G+ G G + + P + + G +VK+ +A++ G V+ W
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTW 4318
Query: 203 GNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
G ++ ++ + + P+ ++ +G +I+ +A+G C +D G VY+WG G
Sbjct: 4319 GKGDFHRLGHGSVDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVYTWGDNDEGQ 4377
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQH 282
LG G V+ +P L+ + L G+H
Sbjct: 4378 LGDGT-VTAIQRPRLV-AALQGKH 4399
Score = 218 (81.8 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 63/214 (29%), Positives = 107/214 (50%)
Query: 131 VCGQDHTLFL-TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
+ G +LF+ ++ GKVY+CG G +G+ GLG +N P + + + +VK + S
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQL--PVLRQYVVKKVAVHSG 3081
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G VF WG E G++ + + PR++ + +I DVA G S +
Sbjct: 3082 GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRA-KKIRDVACGSSHSAAI 3140
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTF 300
+ +G +Y+WG YG LG G ++ +KP L+ + L G+ +V + G
Sbjct: 3141 SSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLV-TALAGR-------RVVQVACGSRDAQT 3191
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG +G+LG G E P ++
Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Score = 213 (80.0 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 57/212 (26%), Positives = 106/212 (50%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL---SSA 186
+ G + +LF +T GK+++ G+G+ G+ G+G ++ P L+ G ++ + K+ S
Sbjct: 4087 LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLL-GSLQHVFVKKVAVNSGG 4145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
C LA++ +G+V+ WG E G++ + M P+++ G+S + D+A G + +
Sbjct: 4146 KHC-LALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS-VADIACGSAHSAAI 4203
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G V +WG YG LG G + ++P L+ + L G + +G
Sbjct: 4204 TASGHVLTWGKGRYGRLGHGDSEDQ-LRPKLVEA-LLGYRAIDIACG-----SGDAQTLC 4256
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
IT+ +++ WG YG+LG G + P K+
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4288
Score = 201 (75.8 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 69/277 (24%), Positives = 123/277 (44%)
Query: 60 PLPVKHPSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
PLP++ + + G H + I N A+++G + G G D +
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHG-----DTHARAVP 659
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
IA LE + CG ++ +T G + + G G + G G+ +++ P LV +
Sbjct: 660 TKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD 719
Query: 177 GERI-VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDV 235
+ V L S LA++ +G VF WG+ +YG++ S +L + + R+ V
Sbjct: 720 HMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRV 777
Query: 236 ASGGSACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFG-QHQFNPKSKVESL 293
+G L+ EG +Y+WG LG V RS++ +P + QH K V+
Sbjct: 778 FAGSQFSVALSSEGQLYTWGKATCLGH-QLVERSVQGCSVPRLVSSLQH----KRIVDVA 832
Query: 294 IA-GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
++ C A+++ G ++ WG+N Q+ +V +P
Sbjct: 833 VSVAHCL--ALSSSGEVFGWGRNDSQQICPASVSSEP 867
Score = 188 (71.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 63/191 (32%), Positives = 87/191 (45%)
Query: 150 GWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
GWG + + LG L TPC + R V+L+ + AV+ G +F G
Sbjct: 4053 GWGHNHRGQLGGLEGSRIKTPTPCEALSLL---RPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 206 EYGQISESEMQI-STPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLVYSWGYG---LLG 260
G++ + P +L + V + V V SGG C L EG VY+WG G LG
Sbjct: 4110 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4169
Query: 261 QGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G ++S +P L+ +H N S V + G AIT GH+ WGK +YG+L
Sbjct: 4170 HGNRMSYD-RPKLV------EH-LNGMS-VADIACGSAHSAAITASGHVLTWGKGRYGRL 4220
Query: 321 GLGTVEDQPFP 331
G G EDQ P
Sbjct: 4221 GHGDSEDQLRP 4231
Score = 180 (68.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 67/257 (26%), Positives = 111/257 (43%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D N + G D +LG+ D + P +I +H ++ + G +++
Sbjct: 632 DSNHNAYSWGTGEDHRLGHGDTHARAVP-------TKIAALEQHC---VQSVYCGCSYSA 681
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD--HTLF 139
IT T+G ++ + G G +D + L ++D G H+L
Sbjct: 682 AITCGGNLLTWGRGTYARLGHG--NSDDRSLPTL---VVALSDHMVVDVALGSGDAHSLA 736
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
LT G V++ G G G+ G G+ N P LV R+ ++ + +A+S +G +
Sbjct: 737 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL---PRVQRVFAGSQFSVALSSEGQL 793
Query: 200 FGWGNSE-YG-QISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
+ WG + G Q+ E +Q S PR++S + RIVDVA + C L+ G V+ WG
Sbjct: 794 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQH-KRIVDVAVSVAHCLALSSSGEVFGWGR 852
Query: 257 GLLGQGPKVSRSMKPTL 273
Q S S +P L
Sbjct: 853 NDSQQICPASVSSEPLL 869
Score = 141 (54.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 47/143 (32%), Positives = 72/143 (50%)
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS--RIVDVASGGSACTM 244
D L+ ++GWG++ GQ+ E +I TP + C+ +S R V +A G +
Sbjct: 4040 DWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTP---TPCEALSLLRPVQLAGGEQSLFA 4096
Query: 245 LNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP-CTF 300
+ +G +++ GYG LG G S ++ PTL+ S QH F K V S G C
Sbjct: 4097 VTPDGKLFATGYGSGGRLGVGGSDSWAI-PTLLGSL---QHVFVKKVAVNS--GGKHCL- 4149
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
A+T G +Y WG+ + G+LG G
Sbjct: 4150 -ALTTEGEVYAWGEGEDGKLGHG 4171
Score = 134 (52.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 56/206 (27%), Positives = 92/206 (44%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L +G AH++ +T F +G+ +G+ G G + G + L ++
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLP--RVQRVFA 779
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH------LNNQETPCLVRGEIEGERIVKLSSA 186
G ++ L+ G++Y+ WG T LGH + P LV ++ +RIV ++ +
Sbjct: 780 GSQFSVALSSEGQLYT--WGK--ATCLGHQLVERSVQGCSVPRLV-SSLQHKRIVDVAVS 834
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
V LA+S G+VFGWG ++ QI + + S P + + VS ASG ACT
Sbjct: 835 VAHCLALSSSGEVFGWGRNDSQQICPASVS-SEPLLRTPIL-VSLPTFPASG-IACTSAQ 891
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPT 272
S G+ + P V +PT
Sbjct: 892 SLVWTQSSHQGVPRRAPFVVDLGEPT 917
Score = 129 (50.5 bits), Expect = 0.00037, P = 0.00037
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G ++ +T + +T+G F + G G V K +A L+G+KI+ G
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK-----VAALQGKKIISIATGSL 4356
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H + ++SG+VY+ G +GQ G G + + P LV ++G+ IVK++ LA+S
Sbjct: 4357 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA-LQGKHIVKVTCGSAHTLALS 4414
Score = 89 (36.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ + G ++ +T +T+G + + G G + + K I L G +++
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG---GDQHVRK--PQPIGGLRGRRVIH 3287
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
G H L +T++G+VY+ G GQ G G+ + P LV G
Sbjct: 3288 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3331
Score = 84 (34.6 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI D+ACG + A S+ + L+ GL +LG+ D + P +LV +
Sbjct: 3126 KIRDVACGSSHSA-AISSQGE---LYTWGLGEYGRLGHGDNTTQLKP-KLVTALA----- 3175
Query: 63 VKHPSTQIKHLATGR--AHTIVITDNEGAFTFGNNSFGQCGRG 103
++ +A G A T+ +T++ F++G+ FG+ GRG
Sbjct: 3176 ----GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3214
Score = 75 (31.5 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 57 VRIPLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
VR P P+ ++ H+A G H + +TD + +G+N GQ G G
Sbjct: 3271 VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 57 (25.1 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ G +Y G+ G+LGLG + P P ++ V
Sbjct: 3034 VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPV 3067
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 260 (96.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 81/253 (32%), Positives = 122/253 (48%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG DH++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQV-----CGFISD---RSVKEVACGGDHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + E IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V + G +F A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRS-LEGI----PLAQVAA--GGAHSF-ALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L ED+ P V
Sbjct: 224 LSDEEDRESPCHV 236
Score = 235 (87.8 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 87/314 (27%), Positives = 147/314 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CGLN+ QLG H+ ++GN E + + L +H I H+A G +H++ ++D
Sbjct: 54 EVYTCGLNTKGQLG-HE--REGNKPEQIGA-----LADEH----IVHVACGESHSLALSD 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G S GQ G +E + I L + I+ CG H L L G+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEESVAVPRL----IQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++ G + GQ GLG +Q +P VR +EG + ++++ A+S G VFGWG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-G- 262
+ GQ+ S+ + + ++V ++ G +L G V+++G G GQ G
Sbjct: 217 NNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYGQLG 321
++ + P + L G S+V + G T + + G +Y +G GQLG
Sbjct: 277 DSMNDEVNPRRVLE-LMG-------SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Query: 322 LG-TVEDQ-PFPLK 333
G T + P P+K
Sbjct: 329 TGHTCNVKCPSPVK 342
Score = 231 (86.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 76/272 (27%), Positives = 130/272 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L E I+
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH---EREGNKPE----QIGALADEHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVKLSSA 186
CG+ H+L L++ G+++S G G+DGQ GL + +E+ P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGL--MTTEESVAVPRLIQ-KLNQQTILQVSCG 145
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSF 203
Query: 244 MLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L+ G V+ WG GQ G + L Q KV + G
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQ-------KVVYISCGEEHTAV 256
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G ++ +G GQLG ++ D+ P +V
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 48/148 (32%), Positives = 77/148 (52%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + +P + + +R + ++ +++ G HT V+T +
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LR--------AQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 88/325 (27%), Positives = 149/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L + V IP + S+ + K +A +G H
Sbjct: 3012 KVYACGEATNGRLG----------LGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 3061
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ LT
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P +V+ + G R+++++ + D LA++D+G VF
Sbjct: 3117 SGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3235 FRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3286 HGQQGNGTTTVNRKPTLVQGLEGQK 3310
Score = 251 (93.4 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 74/283 (26%), Positives = 138/283 (48%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 495 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 546
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML-----VA 598
Query: 121 DLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 599 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 657
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 716
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
G + C L ++ V+SWG Q R KP P+ L G
Sbjct: 717 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 757
Score = 235 (87.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 89/295 (30%), Positives = 142/295 (48%)
Query: 57 VRIPLPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKW 114
V++P P + +T + L G +T + + G +G GR GI E
Sbjct: 3973 VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG---YGAGGRLGIGGTESVSTPT 4029
Query: 115 FCHNIADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+I + +K+ AV G H L L+ G+VYS G DG+ G G+ + + P ++
Sbjct: 4030 LLESIQHVFIKKV--AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSR 231
+ G +V +++ V+ GD++ WG YG++ S+SE Q+ P+++ +G R
Sbjct: 4088 -LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HR 4144
Query: 232 IVDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+VD+A G G A T+ L D+ V+SWG YG LG+G S K + +L G
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV-- 4200
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
KVE G A+T G +Y WGK Y +LG G+ + P +V + G+K
Sbjct: 4201 --KVE---CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Score = 220 (82.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 76/280 (27%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4093
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ +
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGS 4152
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4153 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4211
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 4212 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 4262
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4302
Score = 209 (78.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 67/218 (30%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3114
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3167
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3205
Score = 208 (78.3 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3119 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3170
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3171 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3226 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDSGQVYAW 3281
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 624
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG YG LG+G P LI Q KV G A+T
Sbjct: 625 QVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDVVKVR---CGSQFSIALTKD 675
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WGK +LG GT E +P L + G+K
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710
Score = 202 (76.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 65/249 (26%), Positives = 114/249 (45%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + + +++G G+ G G + EE F A G+ ++ CG +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA---GKHVVHIACGSTY 562
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++Y+ G G G+ G G ++ P LV G ++G +++ ++ + D LAV+
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVT 621
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + +V V G L +G VYS
Sbjct: 622 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-VVKVRCGSQFSIALTKDGQVYS 680
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P L+ L G+ KV + AG A+T ++
Sbjct: 681 WGKGDNQRLGHGTE-EHVRYPKLLEG-LQGK-------KVIDVAAGSTHCLALTEDSEVH 731
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 732 SWGSNDQCQ 740
Score = 200 (75.5 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 72/216 (33%), Positives = 101/216 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3943 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 3997
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4108
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WGK +YG+LG EDQ P V A+ G +
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 4144
Score = 183 (69.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 72/246 (29%), Positives = 115/246 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2960 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 3009
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G GI + ++ +K+ AV G H LT G
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 3066
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3067 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3183 GKLGRG 3188
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L G + C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 445 CEGLANL-G--VTQIACAEKRFLILSRNGRVYTQAYNSDTLA----------PQLVQG-L 490
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G ++ P L+ L G +
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAG-LKGLKVIDV 608
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+T G ++ WG YG+LG G
Sbjct: 609 ACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 127 (49.8 bits), Expect = 0.00060, P = 0.00060
Identities = 41/109 (37%), Positives = 51/109 (46%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V +P +I + F Q
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISA--FSGKQAG- 550
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 551 -KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 598
Score = 97 (39.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3100 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3150
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3151 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Score = 96 (38.9 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD+ + +G+N GQ G G + LEG+KI
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3312
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 49 (22.3 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3039
Score = 38 (18.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3310 KITRVACGSSHSVAWT 3325
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 256 (95.2 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 89/325 (27%), Positives = 149/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L L V IP + S+ + K +A +G H
Sbjct: 3013 KVYACGEATNGRLG----------LGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATA 3062
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ LT
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P +V+ + G R+++++ + D LA++D+G VF
Sbjct: 3118 SGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3236 FRLGHGSDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQGLEGQK 3311
Score = 251 (93.4 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 74/283 (26%), Positives = 138/283 (48%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++KI + G+ + +A + + +GCG +LG+ D P +++ +F
Sbjct: 496 IVKIAAHSDGHHYLALAATGE---VYSWGCG--DGGRLGHGDTVPLEEP-KVISAFSG-- 547
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
K + H+A G ++ IT +T+G ++G+ G G ++E +A
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML-----VA 599
Query: 121 DLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L+G K++D CG TL +TE+G+V+S G G G+ G G + +TP L+ +++
Sbjct: 600 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDL 658
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVAS 237
+VK+ +A++ G V+ WG + ++ +E + P++L +G +++DVA+
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQG-KKVIDVAA 717
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFG 280
G + C L ++ V+SWG Q R KP P+ L G
Sbjct: 718 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPE--PAALPG 758
Score = 236 (88.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 90/295 (30%), Positives = 142/295 (48%)
Query: 57 VRIPLPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKW 114
V++P P + +T + L G +T + + G +G GR GI E
Sbjct: 3976 VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG---YGAGGRLGIGGTESVSTPT 4032
Query: 115 FCHNIADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+I + +K+ AV G H L L+ G+VYS G DG+ G G+ + + P ++
Sbjct: 4033 LLESIQHVFIKKV--AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI--SESEMQISTPRVLSQCKGVSR 231
+ G +V +++ V+ GD++ WG YG++ S+SE Q+ P+++ +G R
Sbjct: 4091 -LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK-PKLVEALQG-HR 4147
Query: 232 IVDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+VDVA G G A T+ L D+ V+SWG YG LG+G S K + +L G
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG--SDGCKVPMKIDSLTGLGVV-- 4203
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
KVE G A+T G +Y WGK Y +LG G+ + P +V + G+K
Sbjct: 4204 --KVE---CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Score = 219 (82.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 76/280 (27%), Positives = 120/280 (42%)
Query: 70 IKHLA--TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
IK +A +G H + ++ +++G G+ G G D I L G ++
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEV 4096
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SA 186
+D G H+ +T +G +Y+ G G G+ G +Q P LV ++G R+V ++ +
Sbjct: 4097 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDVACGS 4155
Query: 187 VDC-VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D L ++D V+ WG+ +YG++ P + G+ +V V G
Sbjct: 4156 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVA 4214
Query: 245 LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G VY+WG Y LG G +P + L G+ KV ++ G
Sbjct: 4215 LTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCV 4265
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
T G +Y WG N GQLG GT P L A+ G+K
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK 4305
Score = 211 (79.3 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 68/218 (31%), Positives = 103/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG L++ P + +VK + S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
A++ G VF WG + G++ S M PR++ K RI D+A G S L
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAL 3115
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3168
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3206
Score = 207 (77.9 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 66/218 (30%), Positives = 106/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3120 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3171
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3172 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH ++ P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3227 VWT--WGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDAGQVYAW 3282
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 67/215 (31%), Positives = 104/215 (48%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GEIEGERIVKLSSAVDCVLA 192
H L L +G+VYS G G G+ G G E P ++ G+ G+ +V ++ A
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 193 VSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASG-GSACTM-LNDEG 249
++ +G+++ WG YG++ S + P +++ KG+ +++DVA G G A T+ + + G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL-KVIDVACGSGDAQTLAVTENG 625
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
V+SWG YG LG+G P LI Q KV G A+T
Sbjct: 626 QVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDVVKVR---CGSQFSIALTKD 676
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
G +Y WGK +LG GT E +P L + G+K
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711
Score = 202 (76.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 65/249 (26%), Positives = 114/249 (45%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDH 136
H + + +++G G+ G G + EE F A G+ ++ CG +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA---GKHVVHIACGSTY 563
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVS 194
+ +T G++Y+ G G G+ G G ++ P LV G ++G +++ ++ + D LAV+
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVT 622
Query: 195 DKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYS 253
+ G V+ WG+ +YG++ TP+++ + + + +V V G L +G VYS
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-VVKVRCGSQFSIALTKDGQVYS 681
Query: 254 WGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG G LG G + P L+ L G+ KV + AG A+T ++
Sbjct: 682 WGKGDNQRLGHGTE-EHVRYPKLLEG-LQGK-------KVIDVAAGSTHCLALTEDSEVH 732
Query: 311 MWGKNQYGQ 319
WG N Q
Sbjct: 733 SWGSNDQCQ 741
Score = 200 (75.5 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 72/216 (33%), Positives = 101/216 (46%)
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TPCLVRGEIEGERIVKLSSAVDCV 190
D TL SG +Y GWG + + LG + + TPC + R V+L +
Sbjct: 3946 DWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTL 4000
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVS-RIVDVASGGSACTMLNDE 248
AV+ G ++ G G++ + +STP +L + V + V V SGG C L+ E
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
G VYSWG G LG G + S +P +I S L G +V + AG +T
Sbjct: 4061 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG-------IEVVDVAAGGAHSACVTA 4111
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
G LY WGK +YG+LG EDQ P V A+ G +
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 4147
Score = 181 (68.8 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 71/246 (28%), Positives = 115/246 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2961 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 3010
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G G+ + ++ +K+ AV G H LT G
Sbjct: 3011 EGKVYACGEATNGRLGLGLSSGTVPIPRQITA-LSSYVVKKV--AVHSGGRHATALTVDG 3067
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
KV+S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3068 KVFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3184 GKLGRG 3189
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L G + C + L L+ +G+VY+ + +D P LV+G +
Sbjct: 446 CEGLANL-G--VTQIACAEKRFLILSRNGRVYTQAYNSDTLA----------PQLVQG-L 491
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA++ G+V+ WG + G++ + + + P+V+S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G ++ P L+ L G +
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAG-LKGLKVIDV 609
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+G A+T G ++ WG YG+LG G
Sbjct: 610 ACG-----SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 127 (49.8 bits), Expect = 0.00060, P = 0.00060
Identities = 41/109 (37%), Positives = 51/109 (46%)
Query: 232 IVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
IV +A S G L G VYSWG G LG G V +P +I + F Q
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISA--FSGKQAG- 551
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
V + G AIT G LY WG+ YG+LG G+ ED+ P+ VA
Sbjct: 552 -KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 599
Score = 97 (39.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3101 RIRDIACGSSHSAALTSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3151
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3152 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Score = 93 (37.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3313
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 49 (22.3 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQI 3040
Score = 38 (18.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3311 KITRVACGSSHSVAWT 3326
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 91/320 (28%), Positives = 150/320 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L CG N + QLG ++ + N L++ + + + + P +K +A G HT+VI D
Sbjct: 3 QLLACGSNGNYQLGINNDEDQ-NSLKVTLFDIDGTMSSEVPGKPMK-IAGGGNHTMVILD 60
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
N F+ G+N FGQCG + + E G + H + G +D CG + ++ + SG+
Sbjct: 61 NGEVFSCGSNEFGQCG--LPRGESL-GVF--HKVP---GNDWLDISCGWEFSILVKRSGE 112
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY CG G G+ GLG E+ + ++G + +K S + + + G V GWGNS
Sbjct: 113 VYVCGRGLKGELGLGK-ETPESELIYSTTVDGFKEIK--SCMQHTIIQTTNGLV-GWGNS 168
Query: 206 EYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPK 264
GQ+ E+E +I TP+ L GV D + G + D V +G + P+
Sbjct: 169 RKGQLGETEDKIMWTPKTLRF--GVV-CKDFSLGREFTAIQTDTNRVKIFGKSSIKNIPE 225
Query: 265 --VSR--SMKPT--LIPST----LFGQH---QFNPKSK---VESLIAGPCTFGAITNFGH 308
V+R +M + ++ T FG + Q P + VE G G +T+
Sbjct: 226 STVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNNSSVAVEEYAIGS-EHGLVTSDNI 284
Query: 309 LYMWGKNQYGQLGLGTVEDQ 328
+Y WG +++G G D+
Sbjct: 285 VYAWGWSEHGNCGTSNASDK 304
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 91/320 (28%), Positives = 150/320 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L CG N + QLG ++ + N L++ + + + + P +K +A G HT+VI D
Sbjct: 3 QLLACGSNGNYQLGINNDEDQ-NSLKVTLFDIDGTMSSEVPGKPMK-IAGGGNHTMVILD 60
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
N F+ G+N FGQCG + + E G + H + G +D CG + ++ + SG+
Sbjct: 61 NGEVFSCGSNEFGQCG--LPRGESL-GVF--HKVP---GNDWLDISCGWEFSILVKRSGE 112
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
VY CG G G+ GLG E+ + ++G + +K S + + + G V GWGNS
Sbjct: 113 VYVCGRGLKGELGLGK-ETPESELIYSTTVDGFKEIK--SCMQHTIIQTTNGLV-GWGNS 168
Query: 206 EYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPK 264
GQ+ E+E +I TP+ L GV D + G + D V +G + P+
Sbjct: 169 RKGQLGETEDKIMWTPKTLRF--GVV-CKDFSLGREFTAIQTDTNRVKIFGKSSIKNIPE 225
Query: 265 --VSR--SMKPT--LIPST----LFGQH---QFNPKSK---VESLIAGPCTFGAITNFGH 308
V+R +M + ++ T FG + Q P + VE G G +T+
Sbjct: 226 STVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNNSSVAVEEYAIGS-EHGLVTSDNI 284
Query: 309 LYMWGKNQYGQLGLGTVEDQ 328
+Y WG +++G G D+
Sbjct: 285 VYAWGWSEHGNCGTSNASDK 304
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 258 (95.9 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 94/334 (28%), Positives = 155/334 (46%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ CG T V N + CG S +LG +GN +L + V L
Sbjct: 3289 VICGQNCTFVI----QANGTVLACGEGSYGRLG------QGNSDDLHVLTVISALQ-GFV 3337
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
TQ+ H++ +T++ F++G+ +G+ G G D Q + I L+GE+
Sbjct: 3338 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEE 3392
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H+ +T GK+++ G G G+ GLG+ +N++ P V +EG +I +++
Sbjct: 3393 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACG 3451
Query: 187 VDCVLAVSDKGD-VFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
++ LAVS G V+ +G+ +YG++ S+P+ + G+ I VA G
Sbjct: 3452 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVA 3510
Query: 245 LNDEGLVYSWGYG-LLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G VY++G L+G +R+ +P IP L G +E + G A
Sbjct: 3511 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP-VLAGV-------VIEDVAVGAEHTLA 3562
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ + G +Y WG N GQLGLG P V V
Sbjct: 3563 LASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 3596
Score = 214 (80.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 77/287 (26%), Positives = 137/287 (47%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 3274 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 3328
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 3329 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 3387
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++GE +V++S V+ G +F +GN +YG++ + P ++ +G +I
Sbjct: 3388 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIG 3446
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S P + L G
Sbjct: 3447 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKV-DVLCG-------IG 3497
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 3498 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 3544
Score = 37 (18.1 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 15 VVATKSKDKNLKLFG 29
++ T +K++N+KL+G
Sbjct: 2897 ILMTCAKEENVKLWG 2911
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 257 (95.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 83/270 (30%), Positives = 131/270 (48%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H++ G++H+ +T+ F FG+N+ GQ G +Q + K C + L+GE+
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLG---LQIKGPVTKPVCVKV--LKGERAQSVA 92
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG DHTL T G++ + G +DGQ GLGH N+ + +R + I LS+
Sbjct: 93 CGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSA 152
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQ+ ++ P+ L+ G S I V+ G ++ D G
Sbjct: 153 ALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQS-IHWVSCGYRHSALVTDSGD 209
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
VYS+G G+ + + P + H S ++ G T A+T LY
Sbjct: 210 VYSFGESADGRLGLSAHQLANHSYPQRVESLH-----SVLQVACGGKHTL-ALTE-DELY 262
Query: 311 MWGKNQYGQLGLGT---VEDQPFPLKVAVG 337
+G ++GQLGLGT V D P VAVG
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSP----VAVG 288
Score = 194 (73.4 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 75/258 (29%), Positives = 119/258 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE-DYQG-KWFCHNIADLEGEKIMDA 130
+A G HT+V T G NS GQ G G + +Q + FC D K++ A
Sbjct: 91 VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC----DYAPIKLLSA 146
Query: 131 VCGQDHT-LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAVD 188
G DHT LTE G+++ G + GQ G G+ ++ L+ E+ G+ I +S
Sbjct: 147 --G-DHTSAALTEDGRLFLWGDNSAGQLGFGN----DSHALLPKELNMGQSIHWVSCGYR 199
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
V+D GDV+ +G S G++ S Q++ + + + ++ VA GG L ++
Sbjct: 200 HSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTED 259
Query: 249 GLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
L Y +G +G LG G V + P + G + K +V + G IT+
Sbjct: 260 EL-YCFGGGEFGQLGLGTLVFVADSPVAV-----GHFR---KGRVTHVTCGEQHSALITD 310
Query: 306 FGHLYMWGKNQYGQLGLG 323
G LY +G ++G+LG G
Sbjct: 311 SGLLYTFGDGRHGKLGHG 328
Score = 188 (71.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 78/279 (27%), Positives = 128/279 (45%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRI-PLPVKH 65
+ACG T+V+T + + G NSD QLG G+ + + SF R+ P
Sbjct: 91 VACGTDHTLVSTSQGE----ILAAGGNSDGQLGL------GHCNDSI-SFQRLRPFCDYA 139
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-- 123
P IK L+ G + +T++ F +G+NS GQ G G D H + E
Sbjct: 140 P---IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFG----ND------SHALLPKELN 186
Query: 124 -GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG-H-LNNQETPCLVRGEIEGERI 180
G+ I CG H+ +T+SG VYS G ADG+ GL H L N P V +
Sbjct: 187 MGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESL---HSV 243
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI--STPRVLSQCKGVSRIVDVASG 238
++++ LA+++ +++ +G E+GQ+ + +P + + R+ V G
Sbjct: 244 LQVACGGKHTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRK-GRVTHVTCG 301
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPK-VSRSMKPTL 273
++ D GL+Y++G +G LG G + + PT+
Sbjct: 302 EQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTV 340
Score = 141 (54.7 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 44/175 (25%), Positives = 82/175 (46%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I ++ G H+ ++TD+ ++FG ++ G+ G Q ++ + + L ++
Sbjct: 191 IHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHS---YPQRVESLHS--VLQ 245
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN-QETPCLVRGEIEGERIVKLSSAVD 188
CG HTL LTE ++Y G G GQ GLG L ++P V G R+ ++
Sbjct: 246 VACGGKHTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAV-GHFRKGRVTHVTCGEQ 303
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIS---TPRVLSQCKGVSRIVDVASGGS 240
++D G ++ +G+ +G++ + + TP V + S ++ VA G S
Sbjct: 304 HSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYS-VMTVACGSS 357
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 254 (94.5 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 78/259 (30%), Positives = 129/259 (49%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
HL+ G H+ V+T N + FG+N++GQ G G + K C + L+ EK+ A
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTC--VKALKPEKVKLAA 93
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG++HTL TE G VY+ G +GQ GLG + T ++ +I +LS+ +
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+++ G +F WG++ GQI ++ + P+ ++ K VS I + G + +G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI---SCGYYHSAFVTTDGE 210
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK--SKV-ESLIAGPC--TFGAITN 305
+Y +G G K+ +P+ L G H+ P+ S++ E +I C +
Sbjct: 211 LYVFGEPENG---KLG-------LPNQLLGNHR-TPQLVSEIPEKVIQVACGGEHTVVLT 259
Query: 306 FGHLYMWGKNQYGQLGLGT 324
+Y +G Q+GQLGLGT
Sbjct: 260 ENAVYTFGLGQFGQLGLGT 278
Score = 220 (82.5 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 88/325 (27%), Positives = 150/325 (46%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
++CG + V T N KL+ G N+ QLG P + V+ P K
Sbjct: 40 LSCGDEHSAVVTG----NNKLYMFGSNNWGQLGLGSKSAISKP-----TCVKALKPEK-- 88
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE- 125
+K A GR HT+V T+ + G N+ GQ G G +E + F H I+ E
Sbjct: 89 ---VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNT----F-HVISFFTSEH 140
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G + + LTE G+++ G ++GQ GL +++N C+ + G+ + +S
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNV---CVPQQVTIGKPVSWISC 197
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS---TPRVLSQCKGVSRIVDVASGGSAC 242
V+ G+++ +G E G++ + TP+++S+ +++ VA GG
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP--EKVIQVACGGEHT 255
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPC 298
+L E VY++G +G LG G + + +P +I N + + S I+ G
Sbjct: 256 VVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIE---------NIRDQTISYISCGEN 305
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
IT+ G +Y +G ++G+LGLG
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLG 330
Score = 164 (62.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 58/196 (29%), Positives = 94/196 (47%)
Query: 32 LNSDSQLG-YHDPR--KKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEG 88
+ +D +L + +P K G P +L+ + R P V ++ +A G HT+V+T+N
Sbjct: 205 VTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN-A 262
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
+TFG FGQ G G E + K NI D + I CG++HT +T+ G +Y+
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPK-VIENIRD---QTISYISCGENHTALITDIGLMYT 318
Query: 149 CGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLSSAVDC---VLAVSDKGDVFGWG 203
G G G+ GLG + N P L + IVKL + C V A +G
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRF--IVKLVACGGCHMVVFAAPHRGVA---K 373
Query: 204 NSEYGQISESEMQIST 219
E+ +I+++ + ++T
Sbjct: 374 EIEFDEINDTCLSVAT 389
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/162 (30%), Positives = 77/162 (47%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGG 239
V LS + V+ ++ +G++ +GQ+ S+ IS P + K V +A+ G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK--VKLAACG 95
Query: 240 SACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
T+++ EG VY+ G G LG G R+ + S +H K++ L A
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI--SFFTSEH------KIKQLSA 147
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
G T A+T G L+MWG N GQ+GL V + P +V +G
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG 189
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 43/182 (23%), Positives = 84/182 (46%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK-WFCHNIADLEGEKIMDAVCGQDHTLFL 140
++ D+ FTFG + F E+ GK WF +++ + CG +H+ +
Sbjct: 7 LMPDSGAVFTFGKSKFA---------ENNPGKFWFKNDVP-------VHLSCGDEHSAVV 50
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T + K+Y G GQ GLG + P V+ ++ E++ + + L ++ G+V+
Sbjct: 51 TGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGRNHTLVSTEGGNVY 109
Query: 201 GWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLL 259
G + GQ+ + + +T V+S +I +++G + L ++G ++ WG
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSE 169
Query: 260 GQ 261
GQ
Sbjct: 170 GQ 171
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ ++ G H+ +T + + FG G+ G G + EK++
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGL----PNQLLGNHRTPQLVSEIPEKVIQ 247
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG +HT+ LTE+ VY+ G G GQ GLG L P ++ I + I +S +
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIEN-IRDQTISYISCGEN 305
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGSACTML 245
++D G ++ +G+ +G++ + + + C R + VA GG C M+
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGG--CHMV 362
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 258 (95.9 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 94/334 (28%), Positives = 155/334 (46%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ CG T V N + CG S +LG +GN +L + V L
Sbjct: 4027 VICGQNCTFVI----QANGTVLACGEGSYGRLG------QGNSDDLHVLTVISALQ-GFV 4075
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
TQ+ H++ +T++ F++G+ +G+ G G D Q + I L+GE+
Sbjct: 4076 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEE 4130
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H+ +T GK+++ G G G+ GLG+ +N++ P V +EG +I +++
Sbjct: 4131 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACG 4189
Query: 187 VDCVLAVSDKGD-VFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
++ LAVS G V+ +G+ +YG++ S+P+ + G+ I VA G
Sbjct: 4190 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVA 4248
Query: 245 LNDEGLVYSWGYG-LLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G VY++G L+G +R+ +P IP L G +E + G A
Sbjct: 4249 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP-VLAGV-------VIEDVAVGAEHTLA 4300
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ + G +Y WG N GQLGLG P V V
Sbjct: 4301 LASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Score = 226 (84.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 66 PSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P IK +++ + HT+ T F++G+ +G+ G G + Y K L
Sbjct: 453 PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQ---GPL 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+ ++ G H+ +TE G++Y+ G G G+ G G N++ P LV+ +I + +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGE 565
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGS 240
+S +A+S G V+ +G + G++ + ++ P+V+ +G+ I V +G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQ 624
Query: 241 ACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ L G VY+WG G LG G + +++P LI +++ + G
Sbjct: 625 SSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA--------ATRIVDISIGDSH 676
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+++ +Y WG N GQ G G
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG 700
Score = 221 (82.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGD-TNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ AG + A+T+ G +Y WG LG G+ E
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSE 650
Score = 216 (81.1 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWG---YGLLGQGPKVSRSMKP 271
Y+WG G GQG KP
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKP 709
Score = 214 (80.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 77/287 (26%), Positives = 137/287 (47%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4012 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4066
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4067 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4125
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++GE +V++S V+ G +F +GN +YG++ + P ++ +G +I
Sbjct: 4126 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIG 4184
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S P + L G
Sbjct: 4185 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKV-DVLCG-------IG 4235
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4236 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4282
Score = 137 (53.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 55/204 (26%), Positives = 82/204 (40%)
Query: 137 TLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
T ++E+ +VY G + Q G P L + + I + C +S
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTI---EAGQYCTFVISTD 421
Query: 197 GDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYS 253
G V G YG++ +S Q + ++ + + V + G T+ EG V+S
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 254 WG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
WG YG LG G S P LI L G+ V + AG A+T G LY
Sbjct: 482 WGDGDYGKLGHGNS-STQKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTEDGELY 533
Query: 311 MWGKNQYGQLGLGTVEDQPFPLKV 334
WG+ +G+LG G + P V
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 120 (47.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYSW 254
K DV+ WG +GQ++E+ + P +++ G CT ++ G V +
Sbjct: 3991 KCDVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVIC----GQNCTFVIQANGTVLAC 4046
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G YG LGQG S + + S L G F V S + + A+T G ++
Sbjct: 4047 GEGSYGRLGQGN--SDDLHVLTVISALQG---FVVTQLVTSCGSDGHSM-ALTESGEVFS 4100
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG YG+LG G + Q P ++ A+ G++
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4130
Score = 91 (37.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 67 STQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+T+I ++ G +H + ++ DNE + +GNNS GQCG+G + K ++ L+G
Sbjct: 664 ATRIVDISIGDSHCLALSHDNE-VYAWGNNSMGQCGQGNSTGPITKPK----KVSGLDGI 718
Query: 126 KIMDAVCGQDHTLFLT 141
I G H+L T
Sbjct: 719 AIQQISAGTSHSLAWT 734
Score = 83 (34.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIM 128
I+ + G ++ +T + +G G C G G + + K I +L +I+
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG---CGACLGCGSSEATALRPKL----IEELAATRIV 668
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAV 187
D G H L L+ +VY+ G + GQ G G+ T P V G ++G I ++S+
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG-LDGIAIQQISAGT 727
Query: 188 DCVLA 192
LA
Sbjct: 728 SHSLA 732
Score = 37 (18.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 15 VVATKSKDKNLKLFG 29
++ T +K++N+KL+G
Sbjct: 3635 ILMTCAKEENVKLWG 3649
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 258 (95.9 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 94/334 (28%), Positives = 155/334 (46%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ CG T V N + CG S +LG +GN +L + V L
Sbjct: 4030 VICGQNCTFVI----QANGTVLACGEGSYGRLG------QGNSDDLHVLTVISALQ-GFV 4078
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
TQ+ H++ +T++ F++G+ +G+ G G D Q + I L+GE+
Sbjct: 4079 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEE 4133
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H+ +T GK+++ G G G+ GLG+ +N++ P V +EG +I +++
Sbjct: 4134 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACG 4192
Query: 187 VDCVLAVSDKGD-VFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
++ LAVS G V+ +G+ +YG++ S+P+ + G+ I VA G
Sbjct: 4193 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVA 4251
Query: 245 LNDEGLVYSWGYG-LLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G VY++G L+G +R+ +P IP L G +E + G A
Sbjct: 4252 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP-VLAGV-------VIEDVAVGAEHTLA 4303
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ + G +Y WG N GQLGLG P V V
Sbjct: 4304 LASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 226 (84.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 66 PSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P IK +++ + HT+ T F++G+ +G+ G G + Y K L
Sbjct: 453 PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQ---GPL 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+ ++ G H+ +TE G++Y+ G G G+ G G N++ P LV+ +I + +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGE 565
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGS 240
+S +A+S G V+ +G + G++ + ++ P+V+ +G+ I V +G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQ 624
Query: 241 ACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ L G VY+WG G LG G + +++P LI +++ + G
Sbjct: 625 SSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA--------ATRIVDISIGDSH 676
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+++ +Y WG N GQ G G
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG 700
Score = 221 (82.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGD-TNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ AG + A+T+ G +Y WG LG G+ E
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSE 650
Score = 216 (81.1 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWG---YGLLGQGPKVSRSMKP 271
Y+WG G GQG KP
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKP 709
Score = 214 (80.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 77/287 (26%), Positives = 137/287 (47%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4015 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4069
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4128
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++GE +V++S V+ G +F +GN +YG++ + P ++ +G +I
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIG 4187
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S P + L G
Sbjct: 4188 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKV-DVLCG-------IG 4238
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Score = 136 (52.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNS-STQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 120 (47.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYSW 254
K DV+ WG +GQ++E+ + P +++ G CT ++ G V +
Sbjct: 3994 KCDVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVIC----GQNCTFVIQANGTVLAC 4049
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G YG LGQG S + + S L G F V S + + A+T G ++
Sbjct: 4050 GEGSYGRLGQGN--SDDLHVLTVISALQG---FVVTQLVTSCGSDGHSM-ALTESGEVFS 4103
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG YG+LG G + Q P ++ A+ G++
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4133
Score = 91 (37.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 67 STQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+T+I ++ G +H + ++ DNE + +GNNS GQCG+G + K ++ L+G
Sbjct: 664 ATRIVDISIGDSHCLALSHDNE-VYAWGNNSMGQCGQGNSTGPITKPK----KVSGLDGI 718
Query: 126 KIMDAVCGQDHTLFLT 141
I G H+L T
Sbjct: 719 AIQQISAGTSHSLAWT 734
Score = 83 (34.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIM 128
I+ + G ++ +T + +G G C G G + + K I +L +I+
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG---CGACLGCGSSEATALRPKL----IEELAATRIV 668
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAV 187
D G H L L+ +VY+ G + GQ G G+ T P V G ++G I ++S+
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG-LDGIAIQQISAGT 727
Query: 188 DCVLA 192
LA
Sbjct: 728 SHSLA 732
Score = 37 (18.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 15 VVATKSKDKNLKLFG 29
++ T +K++N+KL+G
Sbjct: 3638 ILMTCAKEENVKLWG 3652
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 258 (95.9 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 94/334 (28%), Positives = 155/334 (46%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ CG T V N + CG S +LG +GN +L + V L
Sbjct: 4033 VICGQNCTFVI----QANGTVLACGEGSYGRLG------QGNSDDLHVLTVISALQ-GFV 4081
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
TQ+ H++ +T++ F++G+ +G+ G G D Q + I L+GE+
Sbjct: 4082 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEE 4136
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H+ +T GK+++ G G G+ GLG+ +N++ P V +EG +I +++
Sbjct: 4137 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACG 4195
Query: 187 VDCVLAVSDKGD-VFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
++ LAVS G V+ +G+ +YG++ S+P+ + G+ I VA G
Sbjct: 4196 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-IKKVACGTQFSVA 4254
Query: 245 LNDEGLVYSWGYG-LLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G VY++G L+G +R+ +P IP L G +E + G A
Sbjct: 4255 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP-VLAGV-------VIEDVAVGAEHTLA 4306
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ + G +Y WG N GQLGLG P V V
Sbjct: 4307 LASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4340
Score = 216 (81.1 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 67/259 (25%), Positives = 125/259 (48%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+ G+ T VI+ + G S+G+ G G + K ++ K+ +
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVSSSKG 465
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
HTL T G+V+S G G G+ G G+ + Q+ P L++G ++G+ +V +S+ A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG-LV 251
V++ G+++ WG ++G++ + ++ + + K +S + +V+ G S L+ +G V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583
Query: 252 YSWG----YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+S+G G LG G +R KP ++ + Q F + + AG + A+T+ G
Sbjct: 584 WSFGGGDNVGKLGHGD-TNRVYKPKVVEAL---QGMF-----IRKVCAGSQSSLALTSTG 634
Query: 308 HLYMWGKNQYGQLGLGTVE 326
+Y WG LG G+ E
Sbjct: 635 QVYAWGCGAC--LGCGSSE 651
Score = 214 (80.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 77/287 (26%), Positives = 137/287 (47%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4018 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4072
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4073 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4131
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++GE +V++S V+ G +F +GN +YG++ + P ++ +G +I
Sbjct: 4132 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIG 4190
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S P + L G
Sbjct: 4191 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKV-DVLCG-------IG 4241
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4242 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4288
Score = 209 (78.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 66/265 (24%), Positives = 120/265 (45%)
Query: 66 PSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P IK +++ + HT+ T F++G+ +G+ G G + Y K L
Sbjct: 453 PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQ---GPL 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+ ++ G H+ +TE G++Y+ G G G+ G G N++ P LV+ +I + +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGE 565
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSE-YGQISESEM-QISTPRVLSQCKGVSRIVDVASGG 239
+S +A+S G V+ +G + G++ + ++ P+V+ +G+ I V +G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMF-IRKVCAGS 624
Query: 240 SACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ L G VY+WG G LG G + +++P LI +++ + G
Sbjct: 625 QSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA--------ATRIVDISIGDS 676
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
+Y WG N GQ G G
Sbjct: 677 HVWLFVMDNEVYAWGNNSMGQCGQG 701
Score = 190 (71.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGAD-GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
G HT+ L++ G+ V+S G G + G+ G G N P +V ++G I K+ +
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSS 627
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
LA++ G V+ WG SE P+++ + +RIVD++ G S + +
Sbjct: 628 LALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHVWLFVMDNE 686
Query: 251 VYSWG---YGLLGQGPKVSRSMKP 271
VY+WG G GQG KP
Sbjct: 687 VYAWGNNSMGQCGQGNSTGPITKP 710
Score = 137 (53.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 53/201 (26%), Positives = 82/201 (40%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDV 199
++E+ +VY WG++ L QE + + + + C +S G V
Sbjct: 368 VSETCEVYV--WGSNSSHQLVE-GTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 200 FGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDEGLVYSWG- 255
G YG++ +S Q + ++ + + V + G T+ EG V+SWG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 256 --YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
YG LG G S P LI L G+ V + AG A+T G LY WG
Sbjct: 485 GDYGKLGHGNS-STQKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 314 KNQYGQLGLGTVEDQPFPLKV 334
+ +G+LG G + P V
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLV 557
Score = 120 (47.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYSW 254
K DV+ WG +GQ++E+ + P +++ G CT ++ G V +
Sbjct: 3997 KCDVYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVIC----GQNCTFVIQANGTVLAC 4052
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G YG LGQG S + + S L G F V S + + A+T G ++
Sbjct: 4053 GEGSYGRLGQGN--SDDLHVLTVISALQG---FVVTQLVTSCGSDGHSM-ALTESGEVFS 4106
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG YG+LG G + Q P ++ A+ G++
Sbjct: 4107 WGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4136
Score = 90 (36.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 67 STQIKHLATGRAHT-IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+T+I ++ G +H + + DNE + +GNNS GQCG+G + K ++ L+G
Sbjct: 665 ATRIVDISIGDSHVWLFVMDNE-VYAWGNNSMGQCGQGNSTGPITKPK----KVSGLDGI 719
Query: 126 KIMDAVCGQDHTLFLT 141
I G H+L T
Sbjct: 720 AIQQISAGTSHSLAWT 735
Score = 73 (30.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/125 (24%), Positives = 52/125 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIM 128
I+ + G ++ +T + +G G C G G + + K I +L +I+
Sbjct: 617 IRKVCAGSQSSLALTSTGQVYAWG---CGACLGCGSSEATALRPKL----IEELAATRIV 669
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAV 187
D G H +VY+ G + GQ G G+ T P V G ++G I ++S+
Sbjct: 670 DISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG-LDGIAIQQISAGT 728
Query: 188 DCVLA 192
LA
Sbjct: 729 SHSLA 733
Score = 37 (18.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 15 VVATKSKDKNLKLFG 29
++ T +K++N+KL+G
Sbjct: 3641 ILMTCAKEENVKLWG 3655
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 79/253 (31%), Positives = 122/253 (48%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQV-----CGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V + G +F A++ G ++ WG N GQLG
Sbjct: 172 GKEYPSQASPQRVRS-LEGI----PLAQVAA--GGAHSF-ALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L ED+ P V
Sbjct: 224 LSDEEDRESPCHV 236
Score = 236 (88.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 88/314 (28%), Positives = 148/314 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CGLN+ QLG H+ ++GN E + + L +H I H+A G +H++ ++D
Sbjct: 54 EVYTCGLNTKGQLG-HE--REGNKPEQIGA-----LADQH----IVHVACGESHSLALSD 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G S GQ G ++ ED I L + I+ CG H L L G+
Sbjct: 102 RGQLFSWGAGSDGQLG--LMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++ G + GQ GLG +Q +P VR +EG + ++++ A+S G VFGWG
Sbjct: 158 FFTWGKNSHGQLGLGKEYPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-G- 262
+ GQ+ S+ + + ++V ++ G +L G V+++G G GQ G
Sbjct: 217 NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYGQLG 321
++ + P + L G S+V + G T + + G +Y +G GQLG
Sbjct: 277 DSMNDEVNPRRVLE-LMG-------SEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328
Query: 322 LG-TVEDQ-PFPLK 333
G T + P P+K
Sbjct: 329 TGHTCNVKCPSPVK 342
Score = 225 (84.3 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 74/270 (27%), Positives = 127/270 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH---EREGNKPE----QIGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 48/148 (32%), Positives = 77/148 (52%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + +P + + +R + ++ +++ G HT V+T +
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LR--------TQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 252 (93.8 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 87/325 (26%), Positives = 149/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L + V IP + S + K +A +G H +
Sbjct: 3016 KVYACGEATNGRLG----------LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMA 3065
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ +T
Sbjct: 3066 LTVDGKIFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P +V+ + G R+++++ + D LA++D+G VF
Sbjct: 3121 SGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3239 FRLGHGTDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3290 HGQQGNGTTTVNRKPTLVQGLEGQK 3314
Score = 248 (92.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 73/260 (28%), Positives = 125/260 (48%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N ++F G +LG+ D P +L+ + L K + H+A G ++ I
Sbjct: 514 NGEVFSWGCGDGGRLGHGDTVPLEEP-KLISA-----LSGKQAGKHVVHIACGSTYSAAI 567
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD--HTLFLT 141
T +T+G ++G+ G G ED + L+G K++D CG TL +T
Sbjct: 568 TAEGELYTWGRGNYGRLGHG--SSEDQTIPML---VTGLKGLKVIDVSCGSGDAQTLAVT 622
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
E+G+V+S G G G+ G G + +TP L+ +++ IVK+ +A++ G V+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYT 681
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WG + ++ +E + P++L KG +++DVA+G + C L ++ V+SWG
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLKG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Query: 261 QGPKVSRSMKPTLIPSTLFG 280
Q R KP P+ L G
Sbjct: 741 QHFDTLRITKPE--PAALPG 758
Score = 230 (86.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 88/296 (29%), Positives = 141/296 (47%)
Query: 57 VRIPLPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKW 114
V++P P + +T + L G +T + + G +G GR GI E
Sbjct: 3978 VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG---YGAGGRLGIGGTESVSTPT 4034
Query: 115 FCHNIADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+I + +K+ AV G H L L+ G+VYS G DG+ G G+ + + P ++
Sbjct: 4035 LLESIQHVFIKKV--AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSR 231
+ G +V +++ ++ GD+F WG YG++ +SE Q+ P+++ +G R
Sbjct: 4093 -LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY-R 4149
Query: 232 IVDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS-TLFGQHQFN 285
++D+A G G A T+ L D+ V+SWG YG LG+G + P I S T G
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTDLGV---- 4204
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
KVE G A+T G +Y WGK Y +LG G+ + P +V + G+K
Sbjct: 4205 --VKVE---CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Score = 214 (80.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 66/247 (26%), Positives = 114/247 (46%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + ++ N F++G G+ G G + + K G+ ++ CG ++
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTYSA 565
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDK 196
+T G++Y+ G G G+ G G +Q P LV G ++G +++ +S + D LAV++
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 197 GDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+ WG+ +YG++ TP+++ + + + IV V G L +G VY+WG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-IVKVRCGSQFSIALTKDGQVYTWG 683
Query: 256 YG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
G LG G + P L+ L G+ KV + AG A+T ++ W
Sbjct: 684 KGDNQRLGHGTE-EHVRYPKLLEG-LKGK-------KVIDVAAGSTHCLALTEDSEVHSW 734
Query: 313 GKNQYGQ 319
G N Q
Sbjct: 735 GSNDQCQ 741
Score = 209 (78.6 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3001 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G +F WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3118
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3171
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3209
Score = 209 (78.6 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 80/324 (24%), Positives = 133/324 (41%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ G + +LG P L+ S ++H + + +G H + ++
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPT-LLES-------IQHVFIKKVAVNSGGKHCLALSS 4061
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+++G G+ G G D I L G +++D G H+ +T +G
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWG 203
+++ G G G+ G G +Q P LV ++G R++ ++ + D L ++D V+ WG
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWG 4175
Query: 204 NSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+ +YG++ P + + +V V G L G VY+WG Y L
Sbjct: 4176 DGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTFGAITNFGHLYMWGKNQY 317
G G +P + L G+ KV ++ G C G +Y WG N
Sbjct: 4235 GHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCVCCTEDGLGEVYTWGDNDE 4285
Query: 318 GQLGLGTVEDQPFP-LKVAVGGQK 340
GQLG GT P L A+ G+K
Sbjct: 4286 GQLGDGTTNAIQRPRLVAALQGKK 4309
Score = 206 (77.6 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 77/238 (32%), Positives = 113/238 (47%)
Query: 116 CHNIADLE-GEKIMDAVCGQ--DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TP 168
CH++ E E+++ + + D TL SG +Y GWG + + LG + + TP
Sbjct: 3926 CHDVFKREQDEQLVQWMNRRPDDWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTP 3983
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCK 227
C + R V+L + AV+ G ++ G G++ + +STP +L +
Sbjct: 3984 CEALATL---RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040
Query: 228 GVS-RIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
V + V V SGG C L+ EG VYSWG G LG G + S +P +I S L G
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG--- 4095
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+V + AG IT G L+ WGK +YG+LG G EDQ P V A+ G +
Sbjct: 4096 ----IEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYR 4149
Score = 206 (77.6 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 69/234 (29%), Positives = 110/234 (47%)
Query: 119 IADLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---G 173
+ L I+ D H L L+ +G+V+S G G G+ G G E P L+ G
Sbjct: 488 VQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSG 547
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRI 232
+ G+ +V ++ A++ +G+++ WG YG++ + T P +++ KG+ ++
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL-KV 606
Query: 233 VDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+DV+ G G A T+ + + G V+SWG YG LG+G P LI Q
Sbjct: 607 IDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDI 660
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
KV G A+T G +Y WGK +LG GT E +P L + G+K
Sbjct: 661 VKVR---CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK 711
Score = 206 (77.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 66/218 (30%), Positives = 105/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3123 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3174
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3175 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3229
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH + P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3230 VWT--WGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDTGQVYAW 3285
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323
Score = 188 (71.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 71/246 (28%), Positives = 117/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2964 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 3013
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G GI + +++ +K+ AV G H + LT G
Sbjct: 3014 EGKVYACGEATNGRLGLGISSGTVPIPRQITA-LSNYVVKKV--AVHSGGRHAMALTVDG 3070
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
K++S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3071 KIFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTW 3127
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3187 GKLGRG 3192
Score = 186 (70.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 61/217 (28%), Positives = 104/217 (47%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L G ++ C + L L+ +G+VY+ + +D LG P LV+ +
Sbjct: 446 CEGLANL-G--VVQIACAEKRFLILSRNGRVYTQAYNSDT---LG-------PQLVQS-L 491
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA+S G+VF WG + G++ + + + P+++S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG 551
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G +++ P L+ L G +
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTG-LKGLKVIDV 609
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
S +G A+T G ++ WG YG+LG G
Sbjct: 610 -----SCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 182 (69.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 49/173 (28%), Positives = 98/173 (56%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +TD++ +++G+ +G+ GRG + + ++ DL G ++ CG
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTDL-G--VVKVECGS 4211
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS-AVDCVLAV 193
++ LT+SG VY+ G G + G G ++ P V+G ++G++++ +++ ++ CV
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCT 4270
Query: 194 SDK-GDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D G+V+ WG+++ GQ+ + I PR+++ +G +I VA G SA T+
Sbjct: 4271 EDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACG-SAHTL 4321
Score = 134 (52.2 bits), Expect = 0.00010, P = 0.00010
Identities = 44/117 (37%), Positives = 54/117 (46%)
Query: 223 LSQCKGVSRIVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPST 277
L Q IV +A S G L+ G V+SWG G LG G V +P LI S
Sbjct: 487 LVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLI-SA 544
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L G+ V + G AIT G LY WG+ YG+LG G+ EDQ P+ V
Sbjct: 545 LSGKQA---GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 97 (39.2 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3104 RIRDIACGSSHSAAITSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3154
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3155 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 95 (38.5 bits), Expect = 8.9e-17, Sum P(3) = 8.9e-17
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3316
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 49 (22.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3043
Score = 38 (18.4 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 2 IKITDIACGYG 12
+K+ D++CG G
Sbjct: 604 LKVIDVSCGSG 614
Score = 38 (18.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3314 KITRVACGSSHSVAWT 3329
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 252 (93.8 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 87/325 (26%), Positives = 149/325 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQI-KHLA--TGRAHTIV 82
K++ CG ++ +LG L + V IP + S + K +A +G H +
Sbjct: 3016 KVYACGEATNGRLG----------LGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMA 3065
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T + F++G G+ G D I L+ ++I D CG H+ +T
Sbjct: 3066 LTVDGKIFSWGEGDDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVF 200
SG++Y+ G G G+ G G Q P +V+ + G R+++++ + D LA++D+G VF
Sbjct: 3121 SGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 201 GWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG-- 257
WG+ ++G++ + + P+ + + G + + G L G+V++WG G
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Query: 258 -LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
LG G V KP ++ L G+ K+ + G A+T+ G +Y WG N
Sbjct: 3239 FRLGHGTDV-HVRKPQVVEG-LRGK-------KIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 317 YGQLGLGTVEDQPFPLKV-AVGGQK 340
+GQ G GT P V + GQK
Sbjct: 3290 HGQQGNGTTTVNRKPTLVQGLEGQK 3314
Score = 248 (92.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 73/260 (28%), Positives = 125/260 (48%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N ++F G +LG+ D P +L+ + L K + H+A G ++ I
Sbjct: 514 NGEVFSWGCGDGGRLGHGDTVPLEEP-KLISA-----LSGKQAGKHVVHIACGSTYSAAI 567
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD--HTLFLT 141
T +T+G ++G+ G G ED + L+G K++D CG TL +T
Sbjct: 568 TAEGELYTWGRGNYGRLGHG--SSEDQTIPML---VTGLKGLKVIDVSCGSGDAQTLAVT 622
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
E+G+V+S G G G+ G G + +TP L+ +++ IVK+ +A++ G V+
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYT 681
Query: 202 WGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLG 260
WG + ++ +E + P++L KG +++DVA+G + C L ++ V+SWG
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLKG-KKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Query: 261 QGPKVSRSMKPTLIPSTLFG 280
Q R KP P+ L G
Sbjct: 741 QHFDTLRITKPE--PAALPG 758
Score = 230 (86.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 88/296 (29%), Positives = 141/296 (47%)
Query: 57 VRIPLPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKW 114
V++P P + +T + L G +T + + G +G GR GI E
Sbjct: 3978 VKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG---YGAGGRLGIGGTESVSTPT 4034
Query: 115 FCHNIADLEGEKIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+I + +K+ AV G H L L+ G+VYS G DG+ G G+ + + P ++
Sbjct: 4035 LLESIQHVFIKKV--AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSR 231
+ G +V +++ ++ GD+F WG YG++ +SE Q+ P+++ +G R
Sbjct: 4093 -LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY-R 4149
Query: 232 IVDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS-TLFGQHQFN 285
++D+A G G A T+ L D+ V+SWG YG LG+G + P I S T G
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTDLGV---- 4204
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
KVE G A+T G +Y WGK Y +LG G+ + P +V + G+K
Sbjct: 4205 --VKVE---CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Score = 214 (80.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 66/247 (26%), Positives = 114/247 (46%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL 138
H + ++ N F++G G+ G G + + K G+ ++ CG ++
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTYSA 565
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDK 196
+T G++Y+ G G G+ G G +Q P LV G ++G +++ +S + D LAV++
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 197 GDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G V+ WG+ +YG++ TP+++ + + + IV V G L +G VY+WG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD-IVKVRCGSQFSIALTKDGQVYTWG 683
Query: 256 YG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
G LG G + P L+ L G+ KV + AG A+T ++ W
Sbjct: 684 KGDNQRLGHGTE-EHVRYPKLLEG-LKGK-------KVIDVAAGSTHCLALTEDSEVHSW 734
Query: 313 GKNQYGQ 319
G N Q
Sbjct: 735 GSNDQCQ 741
Score = 209 (78.6 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 131 VCGQDHTLF-LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK---LSSA 186
V G +LF +T GKVY+CG +G+ GLG +++ P + +VK + S
Sbjct: 3001 VAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A++ G +F WG + G++ S M PR++ K RI D+A G S +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGSSHSAAI 3118
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G +Y+WG YG LG G ++ +KP ++ L G H+ +V T A
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMV-KVLLG-HRV---IQVACGSRDAQTL-A 3171
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQ 339
+T+ G ++ WG +G+LG G E P + + GQ
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ 3209
Score = 209 (78.6 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 80/324 (24%), Positives = 133/324 (41%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ G + +LG P L+ S ++H + + +G H + ++
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPT-LLES-------IQHVFIKKVAVNSGGKHCLALSS 4061
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+++G G+ G G D I L G +++D G H+ +T +G
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS-SAVDC-VLAVSDKGDVFGWG 203
+++ G G G+ G G +Q P LV ++G R++ ++ + D L ++D V+ WG
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWG 4175
Query: 204 NSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
+ +YG++ P + + +V V G L G VY+WG Y L
Sbjct: 4176 DGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4234
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP--CTFGAITNFGHLYMWGKNQY 317
G G +P + L G+ KV ++ G C G +Y WG N
Sbjct: 4235 GHGSD-DHVRRPRQVQG-LQGK-------KVIAIATGSLHCVCCTEDGLGEVYTWGDNDE 4285
Query: 318 GQLGLGTVEDQPFP-LKVAVGGQK 340
GQLG GT P L A+ G+K
Sbjct: 4286 GQLGDGTTNAIQRPRLVAALQGKK 4309
Score = 206 (77.6 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 77/238 (32%), Positives = 113/238 (47%)
Query: 116 CHNIADLE-GEKIMDAVCGQ--DHTLFLTESGKVYSCGWGADGQTGLGHLNNQE----TP 168
CH++ E E+++ + + D TL SG +Y GWG + + LG + + TP
Sbjct: 3926 CHDVFKREQDEQLVQWMNRRPDDWTLSAGGSGTIY--GWGHNHRGQLGGIEGAKVKVPTP 3983
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCK 227
C + R V+L + AV+ G ++ G G++ + +STP +L +
Sbjct: 3984 CEALATL---RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ 4040
Query: 228 GVS-RIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
V + V V SGG C L+ EG VYSWG G LG G + S +P +I S L G
Sbjct: 4041 HVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR-SPCDRPRVIES-LRG--- 4095
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+V + AG IT G L+ WGK +YG+LG G EDQ P V A+ G +
Sbjct: 4096 ----IEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYR 4149
Score = 206 (77.6 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 69/234 (29%), Positives = 110/234 (47%)
Query: 119 IADLEGEKIMDAVCGQD--HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---G 173
+ L I+ D H L L+ +G+V+S G G G+ G G E P L+ G
Sbjct: 488 VQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSG 547
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRI 232
+ G+ +V ++ A++ +G+++ WG YG++ + T P +++ KG+ ++
Sbjct: 548 KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL-KV 606
Query: 233 VDVASG-GSACTM-LNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
+DV+ G G A T+ + + G V+SWG YG LG+G P LI Q
Sbjct: 607 IDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKL-----QDLDI 660
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
KV G A+T G +Y WGK +LG GT E +P L + G+K
Sbjct: 661 VKVR---CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK 711
Score = 206 (77.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 66/218 (30%), Positives = 105/218 (48%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L+ GL +LG+ D N +L V++ L H Q+ + A T+ +TD
Sbjct: 3123 ELYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG--HRVIQVA-CGSRDAQTLALTD 3174
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G+ FG+ GRG +G NI L G+ + CG +L LT+SG
Sbjct: 3175 EGLVFSWGDGDFGKLGRG-----GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3229
Query: 146 VYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLS-SAVDCVLAVSDKGDVFGW 202
V++ WG LGH + P +V G + G++IV ++ A+ C LAV+D G V+ W
Sbjct: 3230 VWT--WGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHC-LAVTDTGQVYAW 3285
Query: 203 GNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
G++++GQ ++ L Q +I VA G S
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323
Score = 188 (71.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 71/246 (28%), Positives = 117/246 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
K+F GLN QLG KG+ ++ V SF + + +A G +T
Sbjct: 2964 KVFVWGLNDKDQLG----GLKGSKIK-VPSFSETL-----SALNVVQVAGGSKSLFAVTV 3013
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV-CGQDHTLFLTESG 144
+ G + G+ G GI + +++ +K+ AV G H + LT G
Sbjct: 3014 EGKVYACGEATNGRLGLGISSGTVPIPRQITA-LSNYVVKKV--AVHSGGRHAMALTVDG 3070
Query: 145 KVYSCGWGADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
K++S G G DG+ LGH + N + P L+ ++ +RI ++ A++ G+++ W
Sbjct: 3071 KIFSWGEGDDGK--LGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTW 3127
Query: 203 GNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTM-LNDEGLVYSWG---Y 256
G EYG++ + P+++ G R++ VA G A T+ L DEGLV+SWG +
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 257 GLLGQG 262
G LG+G
Sbjct: 3187 GKLGRG 3192
Score = 186 (70.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 61/217 (28%), Positives = 104/217 (47%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
C +A+L G ++ C + L L+ +G+VY+ + +D LG P LV+ +
Sbjct: 446 CEGLANL-G--VVQIACAEKRFLILSRNGRVYTQAYNSDT---LG-------PQLVQS-L 491
Query: 176 EGERIVKLSSAVDC--VLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVS-- 230
IVK+++ D LA+S G+VF WG + G++ + + + P+++S G
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG 551
Query: 231 -RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
+V +A G + + EG +Y+WG YG LG G +++ P L+ L G +
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTG-LKGLKVIDV 609
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
S +G A+T G ++ WG YG+LG G
Sbjct: 610 -----SCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 182 (69.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 49/173 (28%), Positives = 98/173 (56%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A T+ +TD++ +++G+ +G+ GRG + + ++ DL G ++ CG
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTDL-G--VVKVECGS 4211
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS-AVDCVLAV 193
++ LT+SG VY+ G G + G G ++ P V+G ++G++++ +++ ++ CV
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCT 4270
Query: 194 SDK-GDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTM 244
D G+V+ WG+++ GQ+ + I PR+++ +G +I VA G SA T+
Sbjct: 4271 EDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACG-SAHTL 4321
Score = 134 (52.2 bits), Expect = 0.00010, P = 0.00010
Identities = 44/117 (37%), Positives = 54/117 (46%)
Query: 223 LSQCKGVSRIVDVA--SGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPST 277
L Q IV +A S G L+ G V+SWG G LG G V +P LI S
Sbjct: 487 LVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLI-SA 544
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L G+ V + G AIT G LY WG+ YG+LG G+ EDQ P+ V
Sbjct: 545 LSGKQA---GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 97 (39.2 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I DIACG + T S + L+ GL +LG+ D N +L V++ L
Sbjct: 3104 RIRDIACGSSHSAAITSSGE----LYTWGLGEYGRLGHGD-----NTTQLKPKMVKVLLG 3154
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
H Q+ + A T+ +TD F++G+ FG+ GRG
Sbjct: 3155 --HRVIQVA-CGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 95 (38.5 bits), Expect = 8.9e-17, Sum P(3) = 8.9e-17
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I H+A G H + +TD + +G+N GQ G G + LEG+KI
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL-----VQGLEGQKIT 3316
Query: 129 DAVCGQDHTLFLT 141
CG H++ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 49 (22.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ-PFPLKV 334
V + G + A+T G +Y G+ G+LGLG P P ++
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3043
Score = 38 (18.4 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 2 IKITDIACGYG 12
+K+ D++CG G
Sbjct: 604 LKVIDVSCGSG 614
Score = 38 (18.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 3 KITDIACGYGFTVVAT 18
KIT +ACG +V T
Sbjct: 3314 KITRVACGSSHSVAWT 3329
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 255 (94.8 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 91/321 (28%), Positives = 152/321 (47%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ CG T V N + CG S +LG +GN +L + V L
Sbjct: 4032 VICGQNCTFVI----QANGTVLACGEGSYGRLG------QGNSDDLHVLTVISALQ-GFV 4080
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
TQ+ H++ +T++ F++G+ +G+ G G D Q + I L+GE+
Sbjct: 4081 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEE 4135
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H+ +T GK+++ G G G+ GLG+ +N++ P V +EG +I +++
Sbjct: 4136 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACG 4194
Query: 187 VDCVLAVSDKGD-VFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
++ LAVS G V+ +G+ +YG++ S+P+ + G+ I VA G
Sbjct: 4195 LNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIG-IKKVACGTQFSVA 4253
Query: 245 LNDEGLVYSWGYG-LLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
L +G VY++G L+G +R+ +P IP L G +E + G A
Sbjct: 4254 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP-VLAGVI-------IEDVAVGAEHTLA 4305
Query: 303 ITNFGHLYMWGKNQYGQLGLG 323
+ + G +Y WG N GQLGLG
Sbjct: 4306 LASNGDVYAWGSNSEGQLGLG 4326
Score = 225 (84.3 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 66 PSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P IK +++ + HT+ T F++G+ +G+ G G + Y K L
Sbjct: 453 PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQ---GPL 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+ ++ G H+ +TE G++Y+ G G G+ G G N++ P LV+ +I + +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGE 565
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGS 240
+S +A+S G V+ +G + G++ + ++ P+V+ +G+ I V +G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQ 624
Query: 241 ACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ L G VY+WG G LG G + +++P LI +++ + G
Sbjct: 625 SSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA--------ATRIVDVSIGDSH 676
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+++ +Y WG N GQ G G
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG 700
Score = 221 (82.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGD-TNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ AG + A+T+ G +Y WG LG G+ E
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSE 650
Score = 217 (81.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 57/203 (28%), Positives = 96/203 (47%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVDV+ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDVSIGDSHCLALSHDNEV 686
Query: 252 YSWG---YGLLGQGPKVSRSMKP 271
Y+WG G GQG KP
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKP 709
Score = 215 (80.7 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 78/287 (27%), Positives = 137/287 (47%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +P PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++GE +V++S V+ G +F +GN +YG++ + P ++ +G +I
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIG 4189
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S P I L G
Sbjct: 4190 QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKS-SPQKI-DVLCG-------IG 4240
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+++ L G + P ++ V
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Score = 145 (56.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 53/216 (24%), Positives = 86/216 (39%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
E+IM + L VY G G GQ N P + ++++
Sbjct: 3978 EQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQQVI--- 4033
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKG--VSRIVDVASGGSA 241
+C + G V G YG++ + + V+S +G V+++V
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L + G V+SWG YG LG G R +P I + L G+ +V + G
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNS-DRQRRPRQIEA-LQGE-------EVVQMSCGFK 4144
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T+ G L+ +G YG+LGLG ++ P +V
Sbjct: 4145 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Score = 143 (55.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/116 (31%), Positives = 58/116 (50%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G ++ +T + +TFG + G + + I L G I D
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQIPVLAGVIIED 4295
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
G +HTL L +G VY+ G ++GQ GLGH N+ P LV G ++G+ + ++S+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISA 4350
Score = 136 (52.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNS-STQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 90 (36.7 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 67 STQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+T+I ++ G +H + ++ DNE + +GNNS GQCG+G + K ++ L+G
Sbjct: 664 ATRIVDVSIGDSHCLALSHDNE-VYAWGNNSMGQCGQGNSTGPITKPK----KVSGLDGI 718
Query: 126 KIMDAVCGQDHTLFLT 141
I G H+L T
Sbjct: 719 AIQQISAGTSHSLAWT 734
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 247 (92.0 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 96/310 (30%), Positives = 143/310 (46%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG G+ E V+S ++ K S IK + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGL------GHK-EDVLSAQQLSDFCK--SGCIKRITGGGGHSAVVTDE 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G +E Y C ++ G I CG D T+ LTE+G+V
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLL---GCAIQQVACGWDFTIILTENGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C++ IE E++V +++ + LA + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGT 179
Query: 205 --SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWGYG 257
+ G+ ++ T + S G+ S+ V V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSN 239
Query: 258 LLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
GQ + + + P I + F Q++ K+ ++ +G A T G ++ WG+
Sbjct: 240 KHGQLASQAAFLLLPQRIEARCF-QNE-----KIAAVWSGWTHLVAQTVTGKVFTWGRAD 293
Query: 317 YGQLGLGTVE 326
YGQLG TVE
Sbjct: 294 YGQLGR-TVE 302
Score = 223 (83.6 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 100/348 (28%), Positives = 150/348 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I G G + V T D+ LF CGLN D QLG G+ E V+ F P
Sbjct: 51 IKRITGGGGHSAVVT---DEG-SLFVCGLNKDGQLGL------GHTEE-VLYFT----PC 95
Query: 64 KHP-STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
K I+ +A G TI++T+N + G+NSFGQ G V + +L
Sbjct: 96 KSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLG---VPHGPR--RCVIPQAIEL 150
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWG--------ADGQTGLGHLNNQETPCLVRGE 174
EK++ G H L T SG V+ G G GQT L +E P V G
Sbjct: 151 LREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKE-PSTVTG- 208
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIV 233
+E + V + + D +++D G+++ WG++++GQ++ + P R+ ++C +I
Sbjct: 209 LENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIA 268
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
V SG + G V++WG YG LG+ + + +L G P+
Sbjct: 269 AVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGS---GPQKGT 325
Query: 291 ESLIAGPCTFGAIT-------NF----GHLYMWGKNQYGQLGLGTVED 327
S + PC GA N G + WG N++G G GT D
Sbjct: 326 PSCL--PCLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEAD 371
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 79/305 (25%), Positives = 124/305 (40%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ N ++ CG NS QLG H PR+ IP
Sbjct: 103 IQQVACGWDFTIILTE----NGQVLSCGSNSFGQLGVPHGPRR-----------CVIPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
++ ++ +A G H + T + F +G GR + + + +
Sbjct: 148 IELLREKVVSIAAGLRHALAATASGTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTV 206
Query: 123 EGEKIMDAVC---GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGE 178
G + AVC G DH+ LT++G++Y G GQ P + + E
Sbjct: 207 TGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNE 265
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS---------ESEMQI-STPRVLSQCKG 228
+I + S ++A + G VF WG ++YGQ+ ESE Q S P Q KG
Sbjct: 266 KIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQ-KG 324
Query: 229 VSRIVDVASG------GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLF 279
+ +G GS + G+ +SWG+ G+ G G + P +P F
Sbjct: 325 TPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEAD-VWAPKPVPGLRF 383
Query: 280 --GQH 282
G H
Sbjct: 384 FLGLH 388
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 86/294 (29%), Positives = 140/294 (47%)
Query: 24 NLKLFGCGLNSDSQLGYHDPR--KKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
N +++ CG NS QLG P+ K+ P++ +S V I L ++ G+ H++
Sbjct: 46 NHRVYSCGDNSRGQLGQKSPQSTKRPEPIQ-ALSTVHIDL-----------VSCGKEHSV 93
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
+ FT+G S GQ G G +E + I L G KI+ CG H+L L+
Sbjct: 94 AVCHQGRVFTWGAGSEGQLGIGESKEISFMPT----KINSLAGIKIIQVSCGHYHSLALS 149
Query: 142 ESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
E G+V+S G GQ GLG+ L +Q +P V+ +EG + ++++ A+S G F
Sbjct: 150 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGTSF 208
Query: 201 GWGNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
GWGN+ GQ++ S + QI P + K ++ +V ++ G ++L ++G V+++G
Sbjct: 209 GWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN-VVYISCGYEHTSVLTEDGQVFTFGG 267
Query: 257 GL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
L P+ R P LI G H + IA T G + + G
Sbjct: 268 SSSEQLQHSPRSGRG-GPQLIEG--IGGHVSQIECGSYHTIAYVYTTGQVVSLG 318
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 63/251 (25%), Positives = 113/251 (45%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A+G H++++ N ++ G+NS GQ G+ Q I L I CG
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRP-----EPIQALSTVHIDLVSCG 88
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVDCVLA 192
++H++ + G+V++ G G++GQ G+G P + + G +I+++S LA
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAGIKIIQVSCGHYHSLA 147
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+S+ G VF WG++ GQ+ S +P+ + +G+ + VA+GG+ L+ G
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP-LAQVAAGGTHSFALSLMGT 206
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLI-PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+ WG GQ S K + P ++ N V + G +T G +
Sbjct: 207 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN----VVYISCGYEHTSVLTEDGQV 262
Query: 310 YMWGKNQYGQL 320
+ +G + QL
Sbjct: 263 FTFGGSSSEQL 273
Score = 191 (72.3 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 62/204 (30%), Positives = 100/204 (49%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G K++ A G+ H+L L + +VYSCG + GQ G + + P ++ + I +
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-LSTVHIDLV 85
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QIS-TPRVLSQCKGVSRIVDVASGGSA 241
S + +AV +G VF WG GQ+ E +IS P ++ G+ +I+ V+ G
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQVSCGHYH 144
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G + P + S L G P ++V + G
Sbjct: 145 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGI----PLAQVAA--GGTH 197
Query: 299 TFGAITNFGHLYMWGKNQYGQLGL 322
+F A++ G + WG N+ GQL L
Sbjct: 198 SF-ALSLMGTSFGWGNNRSGQLAL 220
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI-VDV 235
G +++K +S L + V+ G++ GQ+ + Q ST R + +S + +D+
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQ-STKRP-EPIQALSTVHIDL 84
Query: 236 ASGGSACTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
S G ++ + +G V++WG G GQ G S PT I S L G K+
Sbjct: 85 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAG-------IKII 136
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKV 334
+ G A++ G ++ WG N+ GQLGLG + Q P KV
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 180
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 86/294 (29%), Positives = 136/294 (46%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST-QIKHLATGRAHTIV 82
N +++ CG NS QLG P+ P E P++ ST I ++ G+ H++
Sbjct: 46 NHRVYSCGDNSRGQLGQKSPQSTKRPEE----------PIQALSTVHIDLVSCGKEHSVA 95
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ FT+G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 96 VCHQGRVFTWGAGSEGQLGIGESKEISFMPT----KINSLAGIKIIQVSCGHYHSLALSE 151
Query: 143 SGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G GQ GLG+ L +Q +P V+ +EG + ++++ A+S G FG
Sbjct: 152 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGTSFG 210
Query: 202 WGNSEYGQI-----SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
WGN+ GQ+ S QI P + K ++ +V ++ G ++L ++G V+++G
Sbjct: 211 WGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLN-VVYISCGYEHTSVLTEDGQVFTFGG 269
Query: 257 GL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
L P+ R P LI G H + IA T G + + G
Sbjct: 270 SSSEQLQHSPRSGRG-GPQLIEG--IGGHVSQIECGSYHTIAYVYTTGQVVSLG 320
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 64/253 (25%), Positives = 115/253 (45%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCG 133
A+G H++++ N ++ G+NS GQ G Q+ K I L I CG
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLG----QKSPQSTKRPEEPIQALSTVHIDLVSCG 89
Query: 134 QDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVDCVLA 192
++H++ + G+V++ G G++GQ G+G P + + G +I+++S LA
Sbjct: 90 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAGIKIIQVSCGHYHSLA 148
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIS--TPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+S+ G VF WG++ GQ+ S +P+ + +G+ + VA+GG+ L+ G
Sbjct: 149 LSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIP-LAQVAAGGTHSFALSLMGT 207
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF---GAITNFG 307
+ WG GQ S K I + H K +++ C + +T G
Sbjct: 208 SFGWGNNRSGQLALSGNSAKAEQI----YKPHSIGAL-KTLNVVYISCGYEHTSVLTEDG 262
Query: 308 HLYMWGKNQYGQL 320
++ +G + QL
Sbjct: 263 QVFTFGGSSSEQL 275
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 62/204 (30%), Positives = 98/204 (48%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G K++ A G+ H+L L + +VYSCG + GQ G + + P + I +
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLV 86
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEM-QIS-TPRVLSQCKGVSRIVDVASGGSA 241
S + +AV +G VF WG GQ+ E +IS P ++ G+ +I+ V+ G
Sbjct: 87 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQVSCGHYH 145
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG G LG G + P + S L G P ++V + G
Sbjct: 146 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGI----PLAQVAA--GGTH 198
Query: 299 TFGAITNFGHLYMWGKNQYGQLGL 322
+F A++ G + WG N+ GQL L
Sbjct: 199 SF-ALSLMGTSFGWGNNRSGQLAL 221
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRI-VDV 235
G +++K +S L + V+ G++ GQ+ + Q ST R + +S + +D+
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQ-STKRPEEPIQALSTVHIDL 85
Query: 236 ASGGSACTM-LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
S G ++ + +G V++WG G GQ G S PT I S L G K+
Sbjct: 86 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS-LAG-------IKII 137
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKV 334
+ G A++ G ++ WG N+ GQLGLG + Q P KV
Sbjct: 138 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 181
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 240 (89.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 88/305 (28%), Positives = 131/305 (42%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG P +L F + P +K + G H+ ++TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQL-SEFCK-------PGC-VKRITGGGGHSAIVTDQ 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G ED C ++ G I CG D T+ LT++G+V
Sbjct: 68 GSLFVCGLNKDGQLGLG--HTEDVLYFTLCKSLL---GCPIQQVACGWDFTIILTKNGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C+V E++ E++V +++ + LA + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGT 179
Query: 205 SEY--------GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY 256
GQ + P ++ S+ V V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGS 239
Query: 257 GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQ 316
GQ + + P +P + H+F KV ++ +G A T G ++ WG+
Sbjct: 240 NKHGQLASQAAFL-P--LPQKIEA-HRFQ-NEKVAAVWSGWTHLVAQTETGKVFTWGRAD 294
Query: 317 YGQLG 321
YGQLG
Sbjct: 295 YGQLG 299
Score = 157 (60.3 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 54/220 (24%), Positives = 96/220 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ TK N ++ CG NS QLG H PR+ +P
Sbjct: 103 IQQVACGWDFTIILTK----NGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ----GKWFCHN 118
++ ++ +A G H + T + F +G GR + + K
Sbjct: 148 IEVQREKVVSIAAGLRHALAATASGLVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSKV 206
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET----PCLVRGE 174
LE + + + G H+ LT++G++Y WG++ G L +Q P +
Sbjct: 207 TVGLENSQAVCVLAGSGHSASLTDAGELYV--WGSNKH---GQLASQAAFLPLPQKIEAH 261
Query: 175 -IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES 213
+ E++ + S ++A ++ G VF WG ++YGQ+ +
Sbjct: 262 RFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGRT 301
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 248 (92.4 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 74/252 (29%), Positives = 120/252 (47%)
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
G ++ G +GIV E C ++D I + CG +H++FL E G+VY
Sbjct: 5 GYWSLGQPGISSNLQGIVAEPQV-----CRFVSD---RSIKEVACGGNHSVFLLEDGEVY 56
Query: 148 SCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 57 TCGVNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 208 GQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQG 262
GQ+ +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG G
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+ P + S L G P ++V + G +F A++ G ++ WG N GQLGL
Sbjct: 173 KEFPSQTSPQRVRS-LEGI----PLAQVAA--GGAHSF-ALSLSGAVFGWGMNNAGQLGL 224
Query: 323 GTVEDQPFPLKV 334
+D+ P V
Sbjct: 225 SDEKDRESPCHV 236
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 90/315 (28%), Positives = 150/315 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CG+N+ QLG H+ ++GN E + + L +H I H+A G +H++ ++D
Sbjct: 54 EVYTCGVNTKGQLG-HE--REGNKPEQIGA-----LADQH----IIHVACGESHSLALSD 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G S GQ G ++ ED I L + I+ CG H L L G+
Sbjct: 102 RGQLFSWGAGSDGQLG--LMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++ G + GQ GLG +Q +P VR +EG + ++++ A+S G VFGWG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216
Query: 205 SEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-G 262
+ GQ+ S E +P + + ++V ++ G +L G V+++G G GQ G
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Query: 263 -PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYGQL 320
V+ + P + L G S+V + G T + + G +Y +G GQL
Sbjct: 276 HDSVNDEVNPRRVLE-LMG-------SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 321 GLG-TVEDQ-PFPLK 333
G G T + P P+K
Sbjct: 328 GTGHTCNVKCPSPVK 342
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 76/270 (28%), Positives = 128/270 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK +A G H++ + ++ +T G N+ GQ G + E + + I L + I+
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH---EREGNKPE----QIGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG +V D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288
Score = 199 (75.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 49/148 (33%), Positives = 77/148 (52%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + + +P + + +R + ++ +++ G HT V+T +
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LR--------TQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT-ESGK 145
G FTFG S GQ G V +E + + +L G ++ CG+ HTL L SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRR-----VLELMGSEVTQIACGRQHTLALVPSSGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 251 (93.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 91/336 (27%), Positives = 156/336 (46%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
+ CG T V N + CG S +LG +GN +L + V L
Sbjct: 4032 VVCGQNCTFVI----QANGTVLACGEGSYGRLG------QGNSDDLHVLTVISALQ-GFV 4080
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
TQ+ H++ +T++ F++G+ +G+ G G D Q + I L+GE+
Sbjct: 4081 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG---NSDRQRR--PRQIEALQGEE 4135
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
++ CG H+ +T GK+++ G G G+ GLG+ +N++ P V +EG +I +++
Sbjct: 4136 VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACG 4194
Query: 187 VDCVLAVSDKGD-VFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVASGGSACTM 244
++ +AVS G V+ +G+ +YG++ S+P+ + G+ I VA G
Sbjct: 4195 LNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIG-IKKVACGTQFSVA 4253
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSM-KPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L +G VY++G L+G +R+ +P +P L G +E + G
Sbjct: 4254 LTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVP-VLSGVF-------IEDIAVGAEHT 4305
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
A+++ G +Y WG N GQLGLG P + V
Sbjct: 4306 LALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4341
Score = 226 (84.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 66 PSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P IK +++ + HT+ T F++G+ +G+ G G + Y K L
Sbjct: 453 PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQ---GPL 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+ ++ G H+ +TE G++Y+ G G G+ G G N++ P LV+ +I + +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGE 565
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGS 240
+S +A+S G V+ +G + G++ + ++ P+V+ +G+ I V +G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQ 624
Query: 241 ACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ L G VY+WG G LG G + +++P LI +++ + G
Sbjct: 625 SSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA--------ATRIVDISIGDSH 676
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
A+++ +Y WG N GQ G G
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG 700
Score = 221 (82.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGD-TNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ AG + A+T+ G +Y WG LG G+ E
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSE 650
Score = 216 (81.1 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLALSHDNEV 686
Query: 252 YSWG---YGLLGQGPKVSRSMKP 271
Y+WG G GQG KP
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKP 709
Score = 216 (81.1 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 80/289 (27%), Positives = 138/289 (47%)
Query: 59 IPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ +PV PS +Q + + G+ T VI N G S+G+ G+G +D
Sbjct: 4017 VMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLH---VLT 4071
Query: 118 NIADLEGEKIMDAV--CGQD-HTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
I+ L+G + V CG D H++ LTESG+V+S G G G+ G G+ + Q P +
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA- 4130
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIV 233
++GE +V++S V+ G +F +GN +YG++ + P ++ +G +I
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIG 4189
Query: 234 DVASGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + ++ +G +V+++G YG LG G ++S P + L G
Sbjct: 4190 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKV-DILCG-------IG 4240
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL--GTVEDQPFPLKVAV 336
++ + G A+T GH+Y +G+ +GL G + P +V V
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPV 4289
Score = 142 (55.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/183 (27%), Positives = 84/183 (45%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
+I +ACG TV A + + FG G +LG + K +P + V I
Sbjct: 4187 QIGQVACGLNHTV-AVSTDGSMVWAFGDG--DYGKLGLGNSTAKSSPQK-----VDILCG 4238
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
+ IK +A G ++ +T + +TFG S G + ++ + L
Sbjct: 4239 IG-----IKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRP---QQVPVL 4290
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G I D G +HTL L+ +G VY+ G ++GQ GLGH N+ P L+ ++G+ I +
Sbjct: 4291 SGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT-VLQGKNIRQ 4349
Query: 183 LSS 185
+S+
Sbjct: 4350 ISA 4352
Score = 136 (52.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNS-STQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Score = 119 (46.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-MLNDEGLVYSW 254
K DV+ WG +GQ++E+ + P ++V G CT ++ G V +
Sbjct: 3996 KCDVYLWGAGRHGQLAEAGRNVMVPVAAPSFSQAQQVVC----GQNCTFVIQANGTVLAC 4051
Query: 255 G---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
G YG LGQG S + + S L G F V S + + A+T G ++
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVLTVISALQG---FVVTQLVTSCGSDGHSM-ALTESGEVFS 4105
Query: 312 WGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
WG YG+LG G + Q P ++ A+ G++
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4135
Score = 93 (37.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 67 STQIKHLATGRAHTIVIT-DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+T+I ++ G +H + ++ DNE + +GNNS GQCG+G + K ++ L+G
Sbjct: 664 ATRIVDISIGDSHCLALSHDNE-VYAWGNNSMGQCGQGNSTGPITKPK----KVSGLDGV 718
Query: 126 KIMDAVCGQDHTLFLT 141
I G H+L T
Sbjct: 719 SIQQISAGTSHSLAWT 734
Score = 84 (34.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQC-GRGIVQEEDYQGKWFCHNIADLEGEKIM 128
I+ + G ++ +T + +G G C G G + + K I +L +I+
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG---CGACLGCGSSEATALRPKL----IEELAATRIV 668
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAV 187
D G H L L+ +VY+ G + GQ G G+ T P V G ++G I ++S+
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSG-LDGVSIQQISAGT 727
Query: 188 DCVLA 192
LA
Sbjct: 728 SHSLA 732
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 239 (89.2 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 90/304 (29%), Positives = 136/304 (44%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG P +L F + P + ++ + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQL-NDFCK-------PRS-VRRITGGGGHSAVVTDG 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G ++ Y C + L G I CG D T+ LTE+G+V
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTP--CKS---LFGCPIQQVACGWDFTIMLTENGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C+V IE E++V +++ + +A + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGT 179
Query: 205 --SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWGYG 257
+ G+ ++ T + S+ G+ S+ + V +G L D G VY WG
Sbjct: 180 GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ + + P +P + H F KV ++ +G A T G ++ WG+ Y
Sbjct: 240 KHGQLANEAAFL-P--VPQKIEA-HCFQ-NEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 318 GQLG 321
GQLG
Sbjct: 295 GQLG 298
Score = 180 (68.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ N ++ CG NS QLG H PR+ +P
Sbjct: 103 IQQVACGWDFTIMLTE----NGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
++ ++ +A G H + T + F +G CGR + + +F
Sbjct: 148 IELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSR 205
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEG 177
+ LE K M + G DH+ LT++G+VY G GQ P + +
Sbjct: 206 VTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQN 264
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G +F WG ++YGQ+
Sbjct: 265 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 247 (92.0 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 74/251 (29%), Positives = 120/251 (47%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+ +G+ S GQ G G +++E I + CG HTLFLT +GKVY+C
Sbjct: 8 YCWGSTSHGQLGLGGIEDEQILTP---SQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 150 GWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G ++ + LGH + P L+ E++ I+++ LA+SD G V WG+++ GQ
Sbjct: 65 G--SNDYSQLGHDLPTKRPLLIP-ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQ 121
Query: 210 ISESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG-QGP 263
+ + + + P+V+ Q +V +A G + L G +YSWG YG LG P
Sbjct: 122 LGHATDKEIVQLPKVVRQLV-TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
L +TL G P + + G +F I+ G ++ WG+N GQLGL
Sbjct: 181 NDLTHCNYPLRLTTLLGI----PLAAIAC--GGNHSF-LISKSGAVFGWGRNNCGQLGLN 233
Query: 324 TVEDQPFPLKV 334
++ +P ++
Sbjct: 234 DETNRSYPTQL 244
Score = 227 (85.0 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 76/281 (27%), Positives = 136/281 (48%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P T ++ +A G HT+ +T + G+N + Q G + + I +L+
Sbjct: 38 PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL-------IPELQDY 90
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-LGHLNNQET---PCLVRGEIEGERIV 181
I+ CG H+L L++ G+V S WG D G LGH ++E P +VR ++ + +V
Sbjct: 91 VIIQICCGSRHSLALSDWGQVLS--WG-DNDCGQLGHATDKEIVQLPKVVR-QLVTKTVV 146
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI---SESEM-QISTPRVLSQCKGVSRIVDVAS 237
+++ + LA++ G+++ WG++ YGQ+ S +++ + P L+ G+ + +A
Sbjct: 147 QIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP-LAAIAC 205
Query: 238 GGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
GG+ +++ G V+ WG G LG + +RS PT + TL ++ +
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY-PTQL-KTL--------RTLGVRFV 255
Query: 295 AGPCTFGA-ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A F +TN G ++ G YGQLG G ++ P V
Sbjct: 256 ACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 296
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 77/278 (27%), Positives = 122/278 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ +ACG+ T+ T + K++ CG N SQLG+ P K+ PL IP
Sbjct: 42 VQQVACGHRHTLFLTATG----KVYACGSNDYSQLGHDLPTKR--PL-------LIPELQ 88
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ QI G H++ ++D ++G+N GQ G +E K + L
Sbjct: 89 DYVIIQI---CCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKV----VRQLV 141
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ---ETPCLVRGEIEGERI 180
+ ++ CG +H+L LT G++YS G GQ G+ N+ P + + G +
Sbjct: 142 TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPL 200
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGG 239
++ + +S G VFGWG + GQ+ E S P L + + + VA G
Sbjct: 201 AAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGD 259
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLI 274
L +EG V++ G YG LG G S M P ++
Sbjct: 260 EFSVFLTNEGGVFTCGAGAYGQLGHGFS-SNEMLPRMV 296
Score = 200 (75.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 77/287 (26%), Positives = 123/287 (42%)
Query: 62 PVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P+ P Q I + G H++ ++D ++G+N GQ G +E K
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKV---- 136
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC---LVRGEI 175
+ L + ++ CG +H+L LT G++YS G GQ G+ N+ T C L +
Sbjct: 137 VRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-THCNYPLRLTTL 195
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVD 234
G + ++ + +S G VFGWG + GQ+ E S P L + + +
Sbjct: 196 LGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRF 254
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
VA G L +EG V++ G YG LG G S M P ++ L G S +
Sbjct: 255 VACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS-SNEMLPRMVME-LMG-------STIT 305
Query: 292 SLIAGPC-TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ G T + + G +Y +G GQLG + + P +V +G
Sbjct: 306 QVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVIG 351
Score = 191 (72.3 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 81/299 (27%), Positives = 131/299 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN---PLELVMSFVRIP 60
+ IACG ++ T + L+ G N QLG + P + PL L + + IP
Sbjct: 145 VVQIACGNNHSLALTSCGE----LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIP 199
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L +A G H+ +I+ + F +G N+ GQ G D + + +
Sbjct: 200 LAA---------IACGGNHSFLISKSGAVFGWGRNNCGQLGLN-----DETNRSYPTQLK 245
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L + CG + ++FLT G V++CG GA GQ G G +N+ P +V E+ G I
Sbjct: 246 TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMGSTI 304
Query: 181 VKLSSAVDCVLA-VSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASG 238
+++ LA V +G V+ +G GQ+ + S + P+V+ G V+
Sbjct: 305 TQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVI---GPW----VSPS 357
Query: 239 GSACTMLNDE--GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
GSA ND LV + G V+ ++ +P F +NPKS++ +L A
Sbjct: 358 GSALLQSNDSQVSLVIRQIFSG-GDQSIVTTTLFVDKVPPEDF--RNYNPKSQILTLTA 413
Score = 155 (59.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 53/200 (26%), Positives = 94/200 (47%)
Query: 143 SGKVYSCGWGAD--GQTGLGHLNNQE--TPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
SGK C WG+ GQ GLG + +++ TP + + + +++ L ++ G
Sbjct: 3 SGKELYC-WGSTSHGQLGLGGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGK 60
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
V+ G+++Y Q+ ++ P ++ + + I+ + G L+D G V SWG
Sbjct: 61 VYACGSNDYSQLGH-DLPTKRPLLIPELQDYV-IIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 259 LGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ G + + +P + Q K+ V+ + G A+T+ G LY WG N Y
Sbjct: 119 CGQLGHATDKEI--VQLPKVV---RQLVTKTVVQ-IACGNNHSLALTSCGELYSWGSNIY 172
Query: 318 GQLGLGTVEDQP---FPLKV 334
GQLG+ + D +PL++
Sbjct: 173 GQLGVNSPNDLTHCNYPLRL 192
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 246 (91.7 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 85/284 (29%), Positives = 136/284 (47%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T + CG TV TK K++ G N D QLG R +G SF P+
Sbjct: 43 VTSVTCGEQHTVFLTKDG----KMWSVGSNMDGQLG-RGSRTEG-------SFSIYPVSW 90
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S +I ++ GR+HT+ +TD+ F +G+N GQ G + + +QG + ++
Sbjct: 91 TS-SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG--MESKFTWQGT--PRRVQEIN 145
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK- 182
I+ G +H + L E G+V+ G ADG+ ++ E P ++ G IV+
Sbjct: 146 D--IVQVASGSNHCIALDEGGRVFVWGEQADGRC----IHRPE-PV---EQLSGVPIVRV 195
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSA 241
L+ A C LA+S G VF WG + G++ +++ T + + Q G+ +V+ A G +
Sbjct: 196 LAGARHC-LALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQH 282
+L G +S+G LGQ G KV + PT + S L G H
Sbjct: 254 TVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAV-SDLIGSH 296
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/210 (30%), Positives = 106/210 (50%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D++G + CG+ HT+FLT+ GK++S G DGQ G G +I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKI 96
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQIS-TPRVLSQCKGVSRIVDVASG 238
+++S+ ++V+D G VF WG++E+GQ+ ES+ TPR + + ++ IV VASG
Sbjct: 97 IQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQE---INDIVQVASG 153
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ C L++ G V+ WG G + R +P L G P +V +AG
Sbjct: 154 SNHCIALDEGGRVFVWGEQ--ADGRCIHRP-EPV---EQLSGV----PIVRV---LAGAR 200
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
A++ G ++ WG+N G+LG+ + Q
Sbjct: 201 HCLALSASGAVFTWGQNNSGELGIDDLRPQ 230
Score = 220 (82.5 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 67/237 (28%), Positives = 111/237 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L GCG + QLG R + +++ + P + T + + G HT+ +T
Sbjct: 4 ELLGCGHTGEGQLGV---RLSESTIQVPERIIGAPNDMD--GTAVTSVTCGEQHTVFLTK 58
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ ++ G+N GQ GRG E G + + ++ KI+ G+ HT+ +T+ G+
Sbjct: 59 DGKMWSVGSNMDGQLGRGSRTE----GSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGR 114
Query: 146 VYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G GQ G+ Q TP V+ EI IV+++S + +A+ + G VF WG
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGTPRRVQ-EIND--IVQVASGSNHCIALDEGGRVFVWGE 171
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G+ I P + Q GV IV V +G C L+ G V++WG G+
Sbjct: 172 QADGRC------IHRPEPVEQLSGVP-IVRVLAGARHCLALSASGAVFTWGQNNSGE 221
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 68/212 (32%), Positives = 101/212 (47%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK-LSS 185
I+ G +H + L E G+V+ G ADG+ ++ E P ++ G IV+ L+
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQADGRC----IHRPE-PV---EQLSGVPIVRVLAG 198
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTM 244
A C LA+S G VF WG + G++ +++ T + + Q G+ +V+ A G + +
Sbjct: 199 ARHC-LALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVL 256
Query: 245 LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G +S+G LGQ G KV + PT + S L G H V + AG C
Sbjct: 257 LTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAV-SDLIGSH-------VTRIAAGACHTI 308
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
AI G Y +G N GQLG G + Q P K
Sbjct: 309 AICK-GAPYPFGLNSSGQLGNGKIMTQSTPRK 339
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/175 (25%), Positives = 85/175 (48%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P PV+ S I + G H + ++ + FT+G N+ G+ G +D + + +
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGI-----DDLRPQTSVQH 235
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ ++G +++A CG +HT+ LT G+ +S G A GQ G G + T ++ G
Sbjct: 236 VHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGS 295
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRI 232
+ ++++ +A+ KG + +G + GQ+ + M STPR + V+ +
Sbjct: 296 HVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKTDELDHVTGV 349
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 246 (91.7 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 85/284 (29%), Positives = 136/284 (47%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+T + CG TV TK K++ G N D QLG R +G SF P+
Sbjct: 43 VTSVTCGEQHTVFLTKDG----KMWSVGSNMDGQLG-RGSRTEG-------SFSIYPVSW 90
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
S +I ++ GR+HT+ +TD+ F +G+N GQ G + + +QG + ++
Sbjct: 91 TS-SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG--MESKFTWQGT--PRRVQEIN 145
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK- 182
I+ G +H + L E G+V+ G ADG+ ++ E P ++ G IV+
Sbjct: 146 D--IVQVASGSNHCIALDEGGRVFVWGEQADGRC----IHRPE-PV---EQLSGVPIVRV 195
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSA 241
L+ A C LA+S G VF WG + G++ +++ T + + Q G+ +V+ A G +
Sbjct: 196 LAGARHC-LALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNH 253
Query: 242 CTMLNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQH 282
+L G +S+G LGQ G KV + PT + S L G H
Sbjct: 254 TVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAV-SDLIGSH 296
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/210 (30%), Positives = 106/210 (50%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D++G + CG+ HT+FLT+ GK++S G DGQ G G +I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKI 96
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQIS-TPRVLSQCKGVSRIVDVASG 238
+++S+ ++V+D G VF WG++E+GQ+ ES+ TPR + + ++ IV VASG
Sbjct: 97 IQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQE---INDIVQVASG 153
Query: 239 GSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+ C L++ G V+ WG G + R +P L G P +V +AG
Sbjct: 154 SNHCIALDEGGRVFVWGEQ--ADGRCIHRP-EPV---EQLSGV----PIVRV---LAGAR 200
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
A++ G ++ WG+N G+LG+ + Q
Sbjct: 201 HCLALSASGAVFTWGQNNSGELGIDDLRPQ 230
Score = 220 (82.5 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 67/237 (28%), Positives = 111/237 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L GCG + QLG R + +++ + P + T + + G HT+ +T
Sbjct: 4 ELLGCGHTGEGQLGV---RLSESTIQVPERIIGAPNDMD--GTAVTSVTCGEQHTVFLTK 58
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ ++ G+N GQ GRG E G + + ++ KI+ G+ HT+ +T+ G+
Sbjct: 59 DGKMWSVGSNMDGQLGRGSRTE----GSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGR 114
Query: 146 VYSCGWGADGQTGL-GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V++ G GQ G+ Q TP V+ EI IV+++S + +A+ + G VF WG
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGTPRRVQ-EIND--IVQVASGSNHCIALDEGGRVFVWGE 171
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
G+ I P + Q GV IV V +G C L+ G V++WG G+
Sbjct: 172 QADGRC------IHRPEPVEQLSGVP-IVRVLAGARHCLALSASGAVFTWGQNNSGE 221
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 68/212 (32%), Positives = 101/212 (47%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK-LSS 185
I+ G +H + L E G+V+ G ADG+ ++ E P ++ G IV+ L+
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQADGRC----IHRPE-PV---EQLSGVPIVRVLAG 198
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTM 244
A C LA+S G VF WG + G++ +++ T + + Q G+ +V+ A G + +
Sbjct: 199 ARHC-LALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVL 256
Query: 245 LNDEGLVYSWGYGLLGQ---GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
L G +S+G LGQ G KV + PT + S L G H V + AG C
Sbjct: 257 LTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAV-SDLIGSH-------VTRIAAGACHTI 308
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
AI G Y +G N GQLG G + Q P K
Sbjct: 309 AICK-GAPYPFGLNSSGQLGNGKIMTQSTPRK 339
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/175 (25%), Positives = 85/175 (48%)
Query: 60 PLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
P PV+ S I + G H + ++ + FT+G N+ G+ G +D + + +
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGI-----DDLRPQTSVQH 235
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ ++G +++A CG +HT+ LT G+ +S G A GQ G G + T ++ G
Sbjct: 236 VHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGS 295
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRI 232
+ ++++ +A+ KG + +G + GQ+ + M STPR + V+ +
Sbjct: 296 HVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKTDELDHVTGV 349
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 246 (91.7 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 77/253 (30%), Positives = 122/253 (48%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQV-----CGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + I+ ++ LA+SD+G +F WG
Sbjct: 56 YTCGLNTKGQ--LGHEREGNKPEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 207 YGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ +E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V + G +F A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRS-LEGI----PLAQVAA--GGAHSF-ALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L +D+ P V
Sbjct: 224 LSDEKDRESPCHV 236
Score = 237 (88.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 90/315 (28%), Positives = 150/315 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CGLN+ QLG H+ ++GN E + + L +H I H+A G +H++ ++D
Sbjct: 54 EVYTCGLNTKGQLG-HE--REGNKPEQIGA-----LADQH----IIHVACGESHSLALSD 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G S GQ G ++ ED I L + I+ CG H L L G+
Sbjct: 102 RGQLFSWGAGSDGQLG--LMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++ G + GQ GLG +Q +P VR +EG + ++++ A+S G VFGWG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216
Query: 205 SEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-G 262
+ GQ+ S E +P + + ++V ++ G +L G V+++G G GQ G
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Query: 263 -PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYGQL 320
++ + P + L G S+V + G T + + G +Y +G GQL
Sbjct: 276 HDSMNDEVNPRRVLE-LMG-------SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 321 GLG-TVEDQ-PFPLK 333
G G T + P P+K
Sbjct: 328 GTGHTCNVKCPSPVK 342
Score = 227 (85.0 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 74/270 (27%), Positives = 128/270 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH---EREGNKPE----QIGALADQHIIH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + VA+GG+ L
Sbjct: 148 HCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 199 (75.1 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 48/148 (32%), Positives = 78/148 (52%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + + +P + + +R + ++ +++ G HT V+T +
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LR--------TQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 240 (89.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 94/323 (29%), Positives = 145/323 (44%)
Query: 27 LFGCGLNSDSQL---GYHDPRKKGNPLELVMSFVRI-PLPVKHPSTQIKHLATGRAHTIV 82
LF GL D L G D + G E + + PL +H I+ +A G H++
Sbjct: 110 LFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEH---SIRCIALGGLHSVA 166
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+T FT+G FG G + Y + + D KI HT +TE
Sbjct: 167 LTHQGDVFTWGYGGFGALGHKV-----YTRELVPRRVDDSWDCKISAIATSGTHTAAITE 221
Query: 143 SGKVYSCGWG---ADGQTGLGHLN--NQETPCLVRGEIEGERIVKLSSAVDC----VLAV 193
SG++Y WG DG+ GLG N+ V +++ V ++S V C +A+
Sbjct: 222 SGELYM--WGREEGDGRLGLGPGRGPNEGGGLSVPSKVKA-LTVPVAS-VSCGGFFTMAL 277
Query: 194 SDKGDVFGWG-NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+ +G ++ WG NS Y + P + +GV RI +A GG L +EG V
Sbjct: 278 TKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGV-RITQIACGGYHSLALTEEGKVL 336
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMW 312
SWG+G G G S S++ +P+ + + K+ + +G + AIT+ G L+MW
Sbjct: 337 SWGHG--GHGQLGSSSLRNQKVPTEI----EALADKKIVFIASGGSSSAAITDGGELWMW 390
Query: 313 GKNQYGQLGL-GTVEDQPFPLKV 334
G + QLG+ G E Q P++V
Sbjct: 391 GNAKDFQLGVPGLPEIQTTPVEV 413
Score = 201 (75.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/208 (30%), Positives = 99/208 (47%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI+ IA T T+S + L ++G D +LG R P E + +P
Sbjct: 205 KISAIATSGTHTAAITESGE--LYMWGRE-EGDGRLGLGPGR---GPNE--GGGLSVPSK 256
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
VK + + ++ G T+ +T + +G NS + GRG D G W + L
Sbjct: 257 VKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG-----DNLGGWEPMPVPSL 311
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
EG +I CG H+L LTE GKV S G G GQ G L NQ+ P + + ++IV
Sbjct: 312 EGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA-LADKKIVF 370
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
++S A++D G+++ WGN++ Q+
Sbjct: 371 IASGGSSSAAITDGGELWMWGNAKDFQL 398
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 239 (89.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 88/325 (27%), Positives = 150/325 (46%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+L CG N QLG G+ LE +M+F PLP +++ ++ G TI++T
Sbjct: 91 ELLVCGQNHKGQLGL------GHTLE-IMTFQTCPLP---GFGRVQQVSCGWDFTIILTG 140
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ G+N+FGQ G + E+ + + + E + G H L T SG
Sbjct: 141 DGLVLACGSNAFGQLG--VSAEKTHSAEPLL--LKSFH-EPVTSVAAGLRHALASTASGC 195
Query: 146 VYSCGWGADG--------QTGLGHLNNQETPCLVRG--EIEGERIVKLSSAVDCVLAVSD 195
VY G G Q HL+++E PCLV G + ++++ S+ C L V+
Sbjct: 196 VYQWGTGLSSHAKRMLNPQPVPSHLSSKE-PCLVPGFAHVTTQKVIAGSAHCAC-LTVN- 252
Query: 196 KGDVFGWGNSEYGQISESEMQISTPRVLSQCK-GVSRIVDVASGGSACTMLNDEGLVYSW 254
G++F WG++++GQ+ + + P L + R+ DV SG + + G V++W
Sbjct: 253 -GELFLWGSNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTW 311
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI-AGPCTFGAITNF----GHL 309
G GQ + + SM+ +H +V++L A + G+ N G +
Sbjct: 312 GRSNYGQLGQTNHSMEKQSCD-----EHLVRSPVEVKALFGATQISCGSEHNLAVVGGRV 366
Query: 310 YMWGKNQYGQLGLGTVED--QPFPL 332
+ WG N++G G G+++D QP P+
Sbjct: 367 FSWGWNEHGMCGDGSLQDITQPQPI 391
Score = 212 (79.7 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 70/253 (27%), Positives = 115/253 (45%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
+T+G NS+GQ G+G +++ + + L+ E+I G H+ +++SG++ C
Sbjct: 40 YTWGANSYGQLGQGNAEDQAEPRRVE----SGLQEEQIRAVTGGGGHSALISDSGELLVC 95
Query: 150 GWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY 207
G GQ GLGH T C + G G R+ ++S D + ++ G V G++ +
Sbjct: 96 GQNHKGQLGLGHTLEIMTFQTCPLPGF--G-RVQQVSCGWDFTIILTGDGLVLACGSNAF 152
Query: 208 GQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSR 267
GQ+ S + + L + VA+G G VY WG GL R
Sbjct: 153 GQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQWGTGLSSHA---KR 209
Query: 268 SMKPTLIPSTLFGQHQ-FNP---KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+ P +PS L + P + +IAG +T G L++WG N++GQL G
Sbjct: 210 MLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISG 269
Query: 324 TVEDQPFPLKVAV 336
++ PL VA+
Sbjct: 270 SLF---LPLPVAL 279
Score = 186 (70.5 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 79/307 (25%), Positives = 126/307 (41%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
L+ G NS QLG + + P V S ++ QI+ + G H+ +I+D+
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRR-VESGLQ--------EEQIRAVTGGGGHSALISDS 89
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLTESGK 145
G N GQ G G E L G ++ CG D T+ LT G
Sbjct: 90 GELLVCGQNHKGQLGLGHTLEI------MTFQTCPLPGFGRVQQVSCGWDFTIILTGDGL 143
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
V +CG A GQ G+ + P L++ E + +++ + LA + G V+ WG
Sbjct: 144 VLACGSNAFGQLGVSAEKTHSAEPLLLKSF--HEPVTSVAAGLRHALASTASGCVYQWGT 201
Query: 205 SEYGQISESEMQIS---TPRVLSQ---C--KGVSRIVD--VASGGSACTMLNDEGLVYSW 254
G S ++ ++ P LS C G + + V +G + C L G ++ W
Sbjct: 202 ---GLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLW 258
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G GQ +S S+ +P + +V + +G A T G ++ WG+
Sbjct: 259 GSNKHGQ--LISGSL---FLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGR 313
Query: 315 NQYGQLG 321
+ YGQLG
Sbjct: 314 SNYGQLG 320
Score = 159 (61.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 72/289 (24%), Positives = 118/289 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYH-DPRKKGNPLELVMSFVRIPL 61
++ ++CG+ FT++ T L L CG N+ QLG + PL L+ SF
Sbjct: 124 RVQQVSCGWDFTIILTGD---GLVL-ACGSNAFGQLGVSAEKTHSAEPL-LLKSF----- 173
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE---EDYQGKWFC-- 116
P T + A G H + T + + +G R + + K C
Sbjct: 174 --HEPVTSV---AAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLV 228
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
A + +K+ + G H LT +G+++ G GQ G L L R ++
Sbjct: 229 PGFAHVTTQKV---IAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVALDRSMLQ 285
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES----EMQISTPRVLSQCKGVSRI 232
ER+ + S ++A ++ G VF WG S YGQ+ ++ E Q ++ V +
Sbjct: 286 DERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKAL 345
Query: 233 VDVA--SGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPS 276
S GS + G V+SWG+ G+ G G + +P IP+
Sbjct: 346 FGATQISCGSEHNLAVVGGRVFSWGWNEHGMCGDG-SLQDITQPQPIPA 393
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 244 (91.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 78/253 (30%), Positives = 120/253 (47%)
Query: 92 FGNNSFGQCG-----RGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
+G S GQ G +GIV E C I+D + + CG +H++FL E G+V
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQV-----CGFISD---RSVKEVACGGNHSVFLLEDGEV 55
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
Y+CG GQ LGH P + G + + IV ++ LA+SD+G +F WG
Sbjct: 56 YTCGVNTKGQ--LGHEREGNKPEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 207 YGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQ 261
GQ+ E ++ PR++ + + I+ V+ G C L +G ++WG +G LG
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQT-ILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171
Query: 262 GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G + P + S L G P ++V +AG A++ G ++ WG N GQLG
Sbjct: 172 GKEFPSQASPQRVRS-LEGI----PLAQV---VAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 322 LGTVEDQPFPLKV 334
L +D+ P V
Sbjct: 224 LSDEKDRESPCHV 236
Score = 230 (86.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 87/315 (27%), Positives = 149/315 (47%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ CG+N+ QLG H+ ++GN E + + L +H I H+A G +H++ ++D
Sbjct: 54 EVYTCGVNTKGQLG-HE--REGNKPEQIGA-----LADQH----IVHVACGESHSLALSD 101
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F++G S GQ G +++ + I L + I+ CG H L L G+
Sbjct: 102 QGQLFSWGAGSDGQLGLMTIEDSVAVPRL----IQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 146 VYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
++ G + GQ GLG +Q +P VR +EG + ++ + A+S G VFGWG
Sbjct: 158 FFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVVAGGAHSFALSLSGAVFGWGM 216
Query: 205 SEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-G 262
+ GQ+ S E +P + + ++V ++ G +L G V+++G G GQ G
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Query: 263 -PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG-PCTFGAITNFGHLYMWGKNQYGQL 320
++ + P + L G S+V + G T + + G +Y +G GQL
Sbjct: 276 HDSMNDEVNPRRVLE-LMG-------SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 321 GLG-TVEDQ-PFPLK 333
G G T + P P+K
Sbjct: 328 GTGHTCNVKCPSPVK 342
Score = 227 (85.0 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 73/270 (27%), Positives = 128/270 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H++ + ++ +T G N+ GQ G + E + + I L + I+
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH---EREGNKPE----QIGALADQHIVH 88
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVD 188
CG+ H+L L++ G+++S G G+DGQ GL + + P L++ ++ + I+++S
Sbjct: 89 VACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQ-KLNQQTILQVSCGNW 147
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
LA++ G F WG + +GQ+ E Q S RV S +G+ + V +GG+ L
Sbjct: 148 HCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVVAGGAHSFAL 205
Query: 246 NDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ G V+ WG GQ G + + L Q KV + G +T
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-------KVVYISCGEEHTAVLT 258
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ +G GQLG ++ D+ P +V
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Score = 199 (75.1 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 48/148 (32%), Positives = 78/148 (52%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + + +P + + +R + ++ +++ G HT V+T +
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LR--------TQKVVYISCGEEHTAVLTKS 260
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSGL 315
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 239 (89.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 90/304 (29%), Positives = 136/304 (44%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG P +L F + P + ++ + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQL-NDFCK-------PRS-VRRITGGGGHSAVVTDG 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G ++ Y C + L G I CG D T+ LTE+G+V
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTP--CKS---LFGCPIQQVACGWDFTIMLTENGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG + GQ G+ H + C+V IE E++V +++ + +A + G VF WG
Sbjct: 123 LSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGT 179
Query: 205 --SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWGYG 257
+ G+ ++ T + S+ G+ S+ + V +G L D G VY WG
Sbjct: 180 GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ + + P +P + H F KV ++ +G A T G ++ WG+ Y
Sbjct: 240 KHGQLANEAAFL-P--VPQKIEA-HCFQ-NEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 318 GQLG 321
GQLG
Sbjct: 295 GQLG 298
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 94/341 (27%), Positives = 147/341 (43%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I G G + V T D LF CGLN D QLG G+ E + F P K
Sbjct: 54 ITGGGGHSAVVTDGGD----LFVCGLNKDGQLGL------GHT-EDIPYFT----PCKSL 98
Query: 67 -STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
I+ +A G TI++T+N + G+NSFGQ G V + +L E
Sbjct: 99 FGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLG---VPHGPR--RCVVPQAIELHKE 153
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWG--------ADGQTGLGHLNNQETPCLVRGEIEG 177
K++ G H + T SG V+ G G GQT L + P V G +E
Sbjct: 154 KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQT-LPLFFTAKEPSRVTG-LEN 211
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVA 236
+ + + + D +++D G+V+ WG++++GQ++ + P ++ + C ++ +
Sbjct: 212 SKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIW 271
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV-ESLIA 295
SG + + G +++WG GQ + R ++ T L Q F P S+ S+ +
Sbjct: 272 SGWTHLVAQTETGKMFTWGRADYGQ---LGRKLE-TYEGWKLEKQDSFLPCSRPPNSMPS 327
Query: 296 GP-CTFGAIT-------NF----GHLYMWGKNQYGQLGLGT 324
P C GA N G Y WG N++G G GT
Sbjct: 328 SPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGT 368
Score = 180 (68.4 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLP 62
I +ACG+ FT++ T+ N ++ CG NS QLG H PR+ +P
Sbjct: 103 IQQVACGWDFTIMLTE----NGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQA 147
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HN 118
++ ++ +A G H + T + F +G CGR + + +F
Sbjct: 148 IELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSR 205
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEG 177
+ LE K M + G DH+ LT++G+VY G GQ P + +
Sbjct: 206 VTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQN 264
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
E++ + S ++A ++ G +F WG ++YGQ+
Sbjct: 265 EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 239 (89.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 94/304 (30%), Positives = 131/304 (43%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
LF G NS QLG P +L F + IK + G H+ V+TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQL-SDFCQAGC--------IKSVTGGGGHSAVVTDG 67
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F G N GQ G G E+ C L G I CG D T+ LTE G+V
Sbjct: 68 GDLFVCGLNKDGQLGLG--HTEEVLRFTICK---PLRGCPIRQVACGWDFTIMLTEKGQV 122
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKGDVFGWGN 204
SCG A GQ G+ H + C+V IE E++V +++ + LA + G VF WG
Sbjct: 123 LSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGT 179
Query: 205 --SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGLVYSWGYG 257
+ G+ ++ T + S+ G+ S V +G L D G +Y WG
Sbjct: 180 GLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRN 239
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
GQ SR++ L P + H F + KV ++ +G A T G ++ WG+ Y
Sbjct: 240 KHGQ--LASRAVFLPL-PQRIEA-HYFQDE-KVTAVWSGWTHLVAKTETGKVFTWGRADY 294
Query: 318 GQLG 321
GQLG
Sbjct: 295 GQLG 298
Score = 209 (78.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 93/349 (26%), Positives = 152/349 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I + G G + V T D LF CGLN D QLG G+ E V+ F I P+
Sbjct: 51 IKSVTGGGGHSAVVTDGGD----LFVCGLNKDGQLGL------GHTEE-VLRFT-ICKPL 98
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+ I+ +A G TI++T+ + G+N+FGQ G V K +
Sbjct: 99 R--GCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLG---VPHGPR--KCVVPQAIECL 151
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWG--ADGQT-----GLGHLNNQETPCLVRGEIE 176
EK++ G H L T +G V+ G G + G+ L + P V G +E
Sbjct: 152 REKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTG-LE 210
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDV 235
V + D +++D G+++ WG +++GQ++ + + P R+ + ++ V
Sbjct: 211 NSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAV 270
Query: 236 ASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTL-FGQHQFNPKSKVE 291
SG + + G V++WG YG LG+ + + KP S+L F Q + S +
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 292 SLI-AGPCTFGAITNFGHLY----MWGKNQYGQLGLGTVED--QPFPLK 333
L A + G+ N + WG N++G G GT + P P++
Sbjct: 331 CLTGATEISCGSEHNLAVIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQ 379
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 243 (90.6 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 96/323 (29%), Positives = 146/323 (45%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH- 65
I+CG T + T+ N KLF G N+ QLG G + V P VK
Sbjct: 41 ISCGDEHTALVTE----NGKLFMFGSNNWGQLGL------GTK-----TTVNKPTCVKAL 85
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
S ++K A GR HT+V T + G N+ GQ G G D + H + +
Sbjct: 86 KSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLG-----DCNDRTSFHLVEFFNKQ 140
Query: 126 -KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
I G + + LT+ G++Y G ++GQ GLG +N TP V G+R+ +S
Sbjct: 141 GPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS---VGKRVFWVS 197
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACT 243
V+ G ++ +G + G++ S +++ +V Q + R+V VA GG
Sbjct: 198 CGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTV 257
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L E VYS+G +G LG G + S P ++ +H F K +V+ G
Sbjct: 258 ALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVV------EH-FR-KGRVKHAACGENHT 308
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
IT+ G LY +G ++G+LGLG
Sbjct: 309 ALITDNGLLYTFGDGRHGKLGLG 331
Score = 234 (87.4 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 73/253 (28%), Positives = 121/253 (47%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G HT ++T+N F FG+N++GQ G G + K C + L+ E++ C
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGT---KTTVNKPTC--VKALKSERVKLTAC 95
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ HTL T G +Y+CG +GQ GLG N++ + LV + I L++ + A
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAA 155
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G ++ WG++ GQI E TP+ +S K R+ V+ G + +G +
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGK---RVFWVSCGYYHSAFVTVDGAL 212
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
Y++G G+ + + +P Q P V+ G T A+T +Y
Sbjct: 213 YTFGEKDSGKLGLSTEKLANHKVPQ----QVTDIPDRVVQVACGGGHTV-ALTE-NEVYS 266
Query: 312 WGKNQYGQLGLGT 324
+G Q+GQLG GT
Sbjct: 267 FGLGQFGQLGHGT 279
Score = 157 (60.3 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 42/134 (31%), Positives = 65/134 (48%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG 98
G D K G E + + ++P V ++ +A G HT+ +T+NE ++FG FG
Sbjct: 216 GEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTENE-VYSFGLGQFG 273
Query: 99 QCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
Q G G E + H ++ A CG++HT +T++G +Y+ G G G+ G
Sbjct: 274 QLGHGTFIFESRLPRVVEH----FRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329
Query: 159 LGHLN--NQETPCL 170
LG N NQ P L
Sbjct: 330 LGEENFTNQFKPTL 343
Score = 148 (57.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 46/161 (28%), Positives = 76/161 (47%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGG 239
+++S + V++ G +F +G++ +GQ+ ++ ++ P + K R+ A G
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKS-ERVKLTACGR 97
Query: 240 SACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ + G +Y+ G G LG G R T F FN + ++ L AG
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDR----TSFHLVEF----FNKQGPIKMLAAG 149
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G LYMWG N GQ+GLG + P +V+VG
Sbjct: 150 SNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVG 190
Score = 123 (48.4 bits), Expect = 0.00044, P = 0.00044
Identities = 42/176 (23%), Positives = 77/176 (43%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T + +TFG G+ G + E + D+ ++++ C
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLG---LSTEKLANHKVPQQVTDIP-DRVVQVAC 251
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ LTE+ +VYS G G GQ G G + P +V +G R+ + +
Sbjct: 252 GGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKG-RVKHAACGENHTA 309
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIVDVASGGSACTML 245
++D G ++ +G+ +G++ E + + C + V GG C ML
Sbjct: 310 LITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGG--CHML 363
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 183 (69.5 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 52/202 (25%), Positives = 94/202 (46%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P +++P + + +A G H +V++ + +G N FGQCG G ++ N
Sbjct: 767 LPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG----HSFR----IAN 818
Query: 119 IADLEGE--KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN--QETPCLVRGE 174
+ ++G+ I CGQ H+ F+ G +++ GWG GQ G G NN Q P V G
Sbjct: 819 LHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL 878
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK-GVSRIV 233
I ++ +++ + ++D G V G+ YGQ+ + I + G R+
Sbjct: 879 IC--KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDD-DIKKVFAFTPLPLGPLRVR 935
Query: 234 DVASGGSACTMLNDEGLVYSWG 255
D+A+ + ++ V+ WG
Sbjct: 936 DIATHYYHSICITEDNRVFEWG 957
Score = 137 (53.3 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+G I+ CG H+ +T G +Y+ G G D Q G G+ N + P V E G + V
Sbjct: 1020 LDGN-IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVF-EPNGAKWV 1077
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
+S + +A +D G VF WG +++GQ
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQ 1105
Score = 114 (45.2 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 37/98 (37%), Positives = 50/98 (51%)
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQ-FNPK 287
IV VA G S ++ EG +Y+WG GL LG G K R M+P HQ F P
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER-MEP----------HQVFEPN 1072
Query: 288 -SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT 324
+K ++ G A T+ G ++ WGKN +GQ G+ T
Sbjct: 1073 GAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLT 1110
Score = 106 (42.4 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL- 61
K+T IACG TVV T + ++ CG S Q+G D KK V +F +PL
Sbjct: 881 KVTQIACGRAHTVVLTDTG----RVLVCGSGSYGQMGVDDDIKK------VFAFTPLPLG 930
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNN 95
P++ ++ +AT H+I IT++ F +G N
Sbjct: 931 PLR-----VRDIATHYYHSICITEDNRVFEWGRN 959
Score = 70 (29.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 260 GQGPKVSRSMKPTLIPSTLFGQHQFNP--KSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
G P+V+ ++ P IP G + + S+ G IT+ G LY WGK
Sbjct: 993 GSTPRVNLNL-PAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLD 1051
Query: 318 GQLGLGTVEDQPFPLKV 334
QLG G ++ P +V
Sbjct: 1052 YQLGHGNKNERMEPHQV 1068
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 233 (87.1 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 78/270 (28%), Positives = 114/270 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I A G +H+ ++D+ FT GN SFGQ G G K ++ + +
Sbjct: 102 ITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAK-----VSHFNNDSVKM 156
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQETPCLVRGEIEGERIVKLSSAV 187
CG H+L L +V G G GQ G + + PC+V G ++ +V++S+
Sbjct: 157 VACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSG-LKDVEVVRISANG 215
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
D A+S G F WG G Q S P LS +VA G + +L
Sbjct: 216 DHSAAISADGQFFSWGRGFCGGPDVHAPQ-SLPSPLS-------FREVAVGWNHALLLTV 267
Query: 248 EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+G V+ G L Q K + + LF + KV + AG A+T G
Sbjct: 268 DGEVFKLGSTLNKQPEKQQLQIDSS---EALFEKVPDFDGVKVMQIAAGAEHSAAVTENG 324
Query: 308 HLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ WG ++GQLGLG DQ P V++G
Sbjct: 325 EVKTWGWGEHGQLGLGNTNDQTSPELVSLG 354
Score = 213 (80.0 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 70/261 (26%), Positives = 118/261 (45%)
Query: 21 KDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHT 80
+++ +++ G +D QLG + + L ++S +P I LA G AH
Sbjct: 11 EEEEEQVWSWGAGTDGQLG--TTKLQDELLPQLLSLTSLP--------SISMLACGGAHV 60
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
I +T FT+G S GQ G G D ++ + I A G H+ F+
Sbjct: 61 IALTSGGKVFTWGRGSSGQLGHG-----DILNITLPKLVSFFDDSVITQAAAGWSHSGFV 115
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
++SG +++CG G+ GQ G G + TP V + + ++ + L + V
Sbjct: 116 SDSGCIFTCGNGSFGQLGHGDTLSLSTPAKV-SHFNNDSVKMVACGMRHSLVLFAGNQVC 174
Query: 201 GWGNSEYGQISESEMQIST---PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYG 257
G+G+ + GQ+ S +I + P V+S K V +V +++ G ++ +G +SWG G
Sbjct: 175 GFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVE-VVRISANGDHSAAISADGQFFSWGRG 233
Query: 258 LLGQGPKVSRSMKPTLIPSTL 278
G GP V P +PS L
Sbjct: 234 FCG-GPDVHA---PQSLPSPL 250
Score = 169 (64.5 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 70/258 (27%), Positives = 108/258 (41%)
Query: 85 DNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG-EKIMDAVCGQDHTLFLTES 143
+ E +++G + GQ G +Q+E + L I CG H + LT
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQDE------LLPQLLSLTSLPSISMLACGGAHVIALTSG 66
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
GKV++ G G+ GQ G G + N P LV + I + ++ VSD G +F G
Sbjct: 67 GKVFTWGRGSSGQLGHGDILNITLPKLV-SFFDDSVITQAAAGWSHSGFVSDSGCIFTCG 125
Query: 204 NSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQG 262
N +GQ+ + + +STP +S S + VA G +L V +G G GQ
Sbjct: 126 NGSFGQLGHGDTLSLSTPAKVSHFNNDS-VKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 263 PKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
S +K +P + G +V + A AI+ G + WG+ G +
Sbjct: 185 GFSSDRIKSVNLPCVVSGLKDV----EVVRISANGDHSAAISADGQFFSWGRGFCGGPDV 240
Query: 323 GTVEDQPFPL---KVAVG 337
+ P PL +VAVG
Sbjct: 241 HAPQSLPSPLSFREVAVG 258
Score = 149 (57.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 62 PVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P PS + +A G H +++T + F G+ Q + +Q + + + +
Sbjct: 243 PQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF--EKVP 300
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIE 176
D +G K+M G +H+ +TE+G+V + GWG GQ GLG+ N+Q +P LV G I+
Sbjct: 301 DFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSID 357
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 56/203 (27%), Positives = 90/203 (44%)
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
E +V+S G G DGQ G L ++ P L+ I L+ V+A++ G VF
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQDELLPQLL-SLTSLPSISMLACGGAHVIALTSGGKVFT 71
Query: 202 WGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YG 257
WG GQ+ + + I+ P+++S S I A+G S ++D G +++ G +G
Sbjct: 72 WGRGSSGQLGHGDILNITLPKLVSFFDD-SVITQAAAGWSHSGFVSDSGCIFTCGNGSFG 130
Query: 258 LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G +S S P+ + H FN S V+ + G + + +G +
Sbjct: 131 QLGHGDTLSLST-----PAKV--SH-FNNDS-VKMVACGMRHSLVLFAGNQVCGFGSGKR 181
Query: 318 GQLGLGTVEDQPFPLKVAVGGQK 340
GQLG + + L V G K
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLK 204
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 73/253 (28%), Positives = 126/253 (49%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
L+ G HT ++T N + FG+N++GQ G G + K C I L+ EK+ A C
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTC--IKALKPEKVKLAAC 94
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++HTL T++G VY+ G +GQ GLG ++++T + + I +LS+ + A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 154
Query: 193 VSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
+++ G +F WG++ GQI E + + P ++ K +S I + G + +G +
Sbjct: 155 LTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI---SCGYYHSAFVTMDGEL 211
Query: 252 YSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM 311
Y++G G+ + + P + G P+ ++ G T +T +Y
Sbjct: 212 YTFGEPENGKLGLPNELLMNHRSPQRVLGI----PERVIQVACGGGHTV-VLTE-KVVYA 265
Query: 312 WGKNQYGQLGLGT 324
+G Q+GQLGLGT
Sbjct: 266 FGLGQFGQLGLGT 278
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/269 (26%), Positives = 121/269 (44%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++K A GR HT+V TD G + G N+ GQ G G + D F + + I
Sbjct: 88 KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT----FHQIVFFTPADTIK 143
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G + + LTE GK++ G ++GQ GL +N C+ G+ I +S
Sbjct: 144 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV---CIPHEVTVGKPISWISCGYY 200
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV-SRIVDVASGGSACTMLND 247
V+ G+++ +G E G++ + R + G+ R++ VA GG +L +
Sbjct: 201 HSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 260
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
+ +VY++G +G LG G + + +P +I K+ + G +T
Sbjct: 261 K-VVYAFGLGQFGQLGLGTFLFETSEPKIIERI--------KDQKICHISCGENHTALMT 311
Query: 305 NFGHLYMWGKNQYGQLGLG--TVEDQPFP 331
G LY +G ++G+LGLG +Q FP
Sbjct: 312 ELGLLYTFGDGRHGKLGLGMENFTNQFFP 340
Score = 203 (76.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 74/284 (26%), Positives = 137/284 (48%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ACG T+V+T + ++ G N++ QLG D + ++V F
Sbjct: 88 KVKLAACGRNHTLVSTDTGG----VYAAGGNNEGQLGLGDTDDRDTFHQIVF-FT----- 137
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P+ IK L+ G + +T++ F +G+NS GQ G ED H +
Sbjct: 138 ---PADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-----EDKSNVCIPHEVT-- 187
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERI 180
G+ I CG H+ F+T G++Y+ G +G+ GL + L N +P V G I ER+
Sbjct: 188 VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLG-IP-ERV 245
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASG 238
++++ + +++K V+ +G ++GQ+ + S P+++ + K +I ++ G
Sbjct: 246 IQVACGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKD-QKICHISCG 303
Query: 239 GSACTMLNDEGLVYSWG---YGLLGQGPK-VSRSMKPTLIPSTL 278
+ ++ + GL+Y++G +G LG G + + PTL + L
Sbjct: 304 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFL 347
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 47/160 (29%), Positives = 73/160 (45%)
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
LS + V+ ++ +G++ +GQ+ S+ I P + K V +A+ G
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK--VKLAACGRN 97
Query: 242 CTMLN-DEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGP 297
T+++ D G VY+ G G LG G R ++ F F P ++ L AG
Sbjct: 98 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIV----F----FTPADTIKQLSAGA 149
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
T A+T G L+MWG N GQ+GL + P +V VG
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 189
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 43/179 (24%), Positives = 78/179 (43%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I ++ G H+ +T + +TFG G+ G + E + + E+++
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIP-ERVIQ 247
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVD 188
CG HT+ LTE VY+ G G GQ GLG L P ++ I+ ++I +S +
Sbjct: 248 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGEN 305
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD--VASGGSACTML 245
+++ G ++ +G+ +G++ + + C R +A GG C ML
Sbjct: 306 HTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG--CHML 362
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 181 (68.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 48/161 (29%), Positives = 80/161 (49%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEGLSHEVIVSAACGRNHT 214
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LTE+G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKG 273
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDV 235
+++ +G EYGQ+ S+ + R+ C+ V R V +
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI 314
Score = 165 (63.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 54/193 (27%), Positives = 86/193 (44%)
Query: 92 FGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLTES 143
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 109 FGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTE 168
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
GK++S G GQ G G E P L+ G + E IV + + LA+++ G VF +G
Sbjct: 169 GKLWSWGRNEKGQLGHGDTKRVEAPRLIEG-LSHEVIVSAACGRNHTLALTETGSVFAFG 227
Query: 204 NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
++ GQ+ + P I +A G +++ +G +YS+G YG LG
Sbjct: 228 ENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLG 287
Query: 261 Q---GPKVSRSMK 270
G ++R+ +
Sbjct: 288 HNSDGKFIARAQR 300
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 48/159 (30%), Positives = 73/159 (45%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSS 185
+ D CG +HTL L +V+S G+G G+ G ++ P LV+ + G ++ +
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYA 391
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
C AVS+ G +F WG + + ES M P+ + G RI +A G S+ +
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNTSR--ESTMY---PKAVQDLCGW-RIRSLACGKSSIIVA 445
Query: 246 NDEGLVYSWG----YGLLGQGPKVSRSMKPTLIPSTLFG 280
DE + SWG +G LG G +S TL G
Sbjct: 446 ADESTI-SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDG 483
Score = 122 (48.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSR--IVDVA 236
+V S A +L ++ +G ++ WG +E GQ+ + + + PR++ +G+S IV A
Sbjct: 153 VVSGSCAAHSLL-ITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI---EGLSHEVIVSAA 208
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G + L + G V+++G +GQ + + +PS Q +N + + + G
Sbjct: 209 CGRNHTLALTETGSVFAFGENKMGQ---LGLGNQTDAVPSP--AQIMYNGQP-ITKMACG 262
Query: 297 PCTFGAITNF-GHLYMWGKNQYGQLG 321
F I + G+LY +G +YGQLG
Sbjct: 263 -AEFSMIMDCKGNLYSFGCPEYGQLG 287
Score = 121 (47.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 42/149 (28%), Positives = 62/149 (41%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ G N QLG+ D ++ P R+ + H I A GR HT+ +T+
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAP--------RLIEGLSHEV--IVSAACGRNHTLALTE 219
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F FG N GQ G G + +N G+ I CG + ++ + G
Sbjct: 220 TGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYN-----GQPITKMACGAEFSMIMDCKGN 274
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+YS G GQ LGH N + + R +
Sbjct: 275 LYSFGCPEYGQ--LGH--NSDGKFIARAQ 299
Score = 93 (37.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DVA G + +L+ + V+SWG+G G G K ++P L F P +
Sbjct: 334 DVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDF-PGRGASQI 389
Query: 294 IAG-PCTFGAITNFGHLYMWG 313
AG C+F A++ G L+ WG
Sbjct: 390 YAGYTCSF-AVSEVGGLFFWG 409
Score = 46 (21.3 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
++ WG YG+LG +D+ P
Sbjct: 351 VFSWGFGGYGRLGHAEQKDEMVP 373
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 228 (85.3 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 70/291 (24%), Positives = 139/291 (47%)
Query: 58 RIPLPVKHPSTQIKHL--ATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
R P +K ++ I+ L A+G H++++ N ++ G+NS+GQ G+ +++ +
Sbjct: 10 RKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR--RDQSTERPEP 67
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGE 174
+ DL + + CG++H++ + GKV++ G G++GQ G+G P ++
Sbjct: 68 IQALNDLHVDLVS---CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA- 123
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRI 232
+ G +I+++S LA+S+ G VF WG + GQ+ ++ + P+ + +G+ +
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIP-L 182
Query: 233 VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
VA+GG+ L+ G + WG GQ ++ + ++ H + S
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQ-----LALSGNKVKEQIYKPHSIGALKNL-S 236
Query: 293 LIAGPCTF---GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQ 339
+I C + +T G ++ +G N GQL Q P + +GG+
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR 287
Score = 224 (83.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 74/258 (28%), Positives = 124/258 (48%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N +++ CG NS QLG + P E + + + H + ++ G+ H++ +
Sbjct: 40 NHRVYSCGDNSWGQLGQRRDQSTERP-EPIQALNDL-----H----VDLVSCGKEHSVAV 89
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
F +G S GQ G G +E + I L G KI+ CG H+L L+E
Sbjct: 90 CHKGKVFAWGAGSEGQLGIGEFKEISFMPT----KIKALAGIKIIQVSCGHYHSLALSED 145
Query: 144 GKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGW 202
G V+S G ++GQ GLG + +Q P V+ +EG + ++++ A+S G FGW
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGTSFGW 204
Query: 203 GNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
G++ GQ++ S + QI P + K +S ++ ++ G +L +EG V+++G
Sbjct: 205 GSNRSGQLALSGNKVKEQIYKPHSIGALKNLS-VIYISCGYEHTAVLTEEGQVFTFGGNS 263
Query: 259 LGQGPKVSRSMK--PTLI 274
GQ RS + P LI
Sbjct: 264 SGQLQPSPRSGQRGPQLI 281
Score = 156 (60.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIP 60
IKI ++CG+ ++ S+D ++ F G NS+ QLG + R + P + V S IP
Sbjct: 127 IKIIQVSCGHYHSLAL--SEDGHV--FSWGRNSEGQLGLGKNSRSQAIP-QKVKSLEGIP 181
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEEDYQGKWFCHN 118
L Q+ A G H+ ++ +F +G+N GQ V+E+ Y+ H+
Sbjct: 182 L------AQV---AAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP----HS 228
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I L+ ++ CG +HT LTE G+V++ G + GQ + Q P L+ G G
Sbjct: 229 IGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGI--GG 286
Query: 179 RIVKLSSAVDCVLA-VSDKGDVFGWG 203
R+ ++ A +A V G V G
Sbjct: 287 RVSQIECASYHTIAYVYTTGQVVSLG 312
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 227 (85.0 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 75/255 (29%), Positives = 119/255 (46%)
Query: 30 CGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT---GRAHTIVITDN 86
CG NS QLG +KG P R P + P+ + ++A G+ H++ +
Sbjct: 47 CGDNSRGQLG-----RKGTP--------RGEQPERIPALETLNVALVSCGKEHSLAVCHK 93
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
F +G S GQ G G +E + K I L G KI+ CG H++ L+E G+V
Sbjct: 94 GRVFAWGAASEGQLGIGEFKETTFIPK----KIKTLAGIKIIQVACGHYHSVALSEDGQV 149
Query: 147 YSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNS 205
+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FGWG++
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGTSFGWGSN 208
Query: 206 EYGQISESEMQISTPRVLSQCKGVSR---IVDVASGGSACTMLNDEGLVYSWG---YGLL 259
GQ++ S R G + +V ++ G +L +G V+++G YG L
Sbjct: 209 SAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Query: 260 GQGPKVSRSMKPTLI 274
G P + P L+
Sbjct: 269 GHDPTAEKR-GPQLV 282
Score = 212 (79.7 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 74 ATGRAHTIVITDNEGAFTFGNNSFGQCGR-GIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
A+G H++++ + + G+NS GQ GR G + E + I LE + C
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE------RIPALETLNVALVSC 82
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSSAVDCVL 191
G++H+L + G+V++ G ++GQ G+G P ++ + G +I++++ +
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSV 141
Query: 192 AVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
A+S+ G VF WG + +GQ+ E Q S RV S +G+ + VA+GG L+
Sbjct: 142 ALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGHHSFALSLS 199
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPT--LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G + WG GQ +S + P P ++ V S+ G +T
Sbjct: 200 GTSFGWGSNSAGQ-LALSGNNAPVQRYKPVSIGALKTLG----VVSISCGYKHTAVLTQD 254
Query: 307 GHLYMWGKNQYGQLG 321
G ++ +G N YGQLG
Sbjct: 255 GKVFTFGDNSYGQLG 269
Score = 208 (78.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 64/204 (31%), Positives = 97/204 (47%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G ++ A G+ H+L L G V SCG + GQ G E P + +E + +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPA-LETLNVALV 80
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSA 241
S + LAV KG VF WG + GQ+ E + +T P+ + G+ +I+ VA G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYH 139
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+++G V+SWG +G LG G + P + S L G P ++V + G
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGI----PLAQVAA--GGHH 192
Query: 299 TFGAITNFGHLYMWGKNQYGQLGL 322
+F A++ G + WG N GQL L
Sbjct: 193 SF-ALSLSGTSFGWGSNSAGQLAL 215
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 54/177 (30%), Positives = 83/177 (46%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIP 60
IKI +ACG+ +V S+D ++F G NS QLG + + +P + V S IP
Sbjct: 128 IKIIQVACGHYHSVAL--SEDG--QVFSWGTNSHGQLGLGKEFPSQASP-QRVRSLEGIP 182
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
L Q+ A G H+ ++ + +F +G+NS GQ Q ++ +I
Sbjct: 183 L------AQV---AAGGHHSFALSLSGTSFGWGSNSAGQLALS-GNNAPVQ-RYKPVSIG 231
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
L+ ++ CG HT LT+ GKV++ G + GQ G + P LV IEG
Sbjct: 232 ALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVE-RIEG 287
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 44/147 (29%), Positives = 66/147 (44%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
FG G NS QL GN V + + + + + ++ G HT V+T +
Sbjct: 203 FGWGSNSAGQLAL-----SGNNAP-VQRYKPVSIGALK-TLGVVSISCGYKHTAVLTQDG 255
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGKV 146
FTFG+NS+GQ G E+ +G I L + +D CG DHTL ++ +G+V
Sbjct: 256 KVFTFGDNSYGQLGHDPTAEK--RGPQLVERIEGLVSQ--ID--CGSDHTLAYIYTTGQV 309
Query: 147 YSCGWGADGQTGLGH--LNNQETPCLV 171
S G G + H + + CLV
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLV 336
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 226 (84.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 76/271 (28%), Positives = 124/271 (45%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P ++ A+G H++++ N + G+NS GQ GR Q + I LE
Sbjct: 21 PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELP-----EPIQALE-T 74
Query: 126 KIMDAV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKL 183
I+D V CG++H+L + G+V++ G G++GQ G+G TP + + +I+++
Sbjct: 75 LIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQV 133
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGS 240
S LA+S VF WG + +GQ+ E Q S RV S +G+ + VA+GG+
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIP-LAQVAAGGA 191
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L+ G + WG GQ R++ P L N V + G
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNV-PVQSNKPLSVGALKN--LGVVYISCGDAHT 248
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+T G ++ +G N+ GQLG ++ P
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279
Score = 216 (81.1 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 83/294 (28%), Positives = 135/294 (45%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT-GRAHTIV 82
N ++ CG NS QLG R+ EL P P++ T I L + G+ H++
Sbjct: 41 NHRVLSCGDNSRGQLG----RRGAQRGEL-------PEPIQALETLIVDLVSCGKEHSLA 89
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ F +G S GQ G G +E + K I L KI+ CG H+L L++
Sbjct: 90 VCHKGRVFAWGAGSEGQLGIGEFKEISFTPK----KIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 143 SGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
+V+S G + GQ GLG +Q +P VR +EG + ++++ A+S G FG
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 202 WGNSEYGQISES----EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
WG++ GQ++ S +Q + P + K + +V ++ G + +L +G V+++G
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG-VVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 256 -YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G LG P + P L+ Q + S +A T G + +FGH
Sbjct: 264 RSGQLGYSPTPEKR-GPQLVERIDGLVSQIDCGSY--HTLAYVHTTGQVVSFGH 314
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 63/220 (28%), Positives = 100/220 (45%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIP 60
IKI ++CG+ ++ SKD ++F G NS QLG + + +P + V S IP
Sbjct: 128 IKIIQVSCGHYHSLAL--SKDS--QVFSWGKNSHGQLGLGKEFPSQASP-QRVRSLEGIP 182
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQC---GRGIVQEEDYQGKWFCH 117
L Q+ A G AH+ ++ +F +G+NS GQ GR + + +
Sbjct: 183 L------AQV---AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP-----L 228
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
++ L+ ++ CG HT LT+ GKV++ G GQ G + P LV I+G
Sbjct: 229 SVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG 287
Query: 178 ERIVKLSSAVDCVLA-VSDKGDV--FGWGNSEYGQISESE 214
+ ++ LA V G V FG G S+ + + E
Sbjct: 288 -LVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPE 326
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 226 (84.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 61/223 (27%), Positives = 113/223 (50%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERI 180
L+ +KI+ CG H+L L++ G++++ G GQ G+G + TP +V + G +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPL 193
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
++S+ +A+S G+++ WG +E GQ+ + L + ++ VA GGS
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 241 ACTMLNDEGLVYSWGYGLLGQ-GPKVSRS-MKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
+L +GL++++G G GQ G +++ ++P L+ + L G +V + G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV-AELVGY-------RVTQIACGRW 305
Query: 299 -TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
T +++ G ++ +G + GQLG G DQ PL V V +
Sbjct: 306 HTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 175 (66.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 48/195 (24%), Positives = 92/195 (47%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I + G H++ ++ F +G N GQ G G + + L G +
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLA 194
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
G+ H++ L+ SG +YS G GQ GLGH +++ P L+ G ++ +++ ++
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGS 253
Query: 189 CVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGG-SACTMLN 246
++ G +F +G ++GQ+ + Q P ++++ G R+ +A G ++
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-RVTQIACGRWHTLAYVS 312
Query: 247 DEGLVYSWGYGLLGQ 261
D G V+S+G G GQ
Sbjct: 313 DLGKVFSFGSGKDGQ 327
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 174 (66.3 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 47/161 (29%), Positives = 80/161 (49%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
AH+++IT +++G N GQ G G + + I L E I+ A CG++HT
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAP-----RLIEALSHEAIVLAACGRNHT 212
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKG 197
L LT++G V++ G GQ GLG+ P + G+ I K++ + + + KG
Sbjct: 213 LALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKG 271
Query: 198 DVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDV 235
+++ +G EYGQ+ S+ + R+ C+ V R V +
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI 312
Score = 165 (63.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 54/193 (27%), Positives = 85/193 (44%)
Query: 92 FGNNSFGQCGRGIV--QEEDY----QGKWFCHNIADLEGEKIMDAVCGQ--DHTLFLTES 143
FG ++ GR V Q+ Y Q W H L G ++ V G H+L +T
Sbjct: 107 FGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTE 166
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
GK++S G GQ G G E P L+ + E IV + + LA++D G VF +G
Sbjct: 167 GKLWSWGRNEKGQLGHGDTKRVEAPRLIEA-LSHEAIVLAACGRNHTLALTDTGSVFAFG 225
Query: 204 NSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLG 260
++ GQ+ + P I +A G +++ +G +YS+G YG LG
Sbjct: 226 ENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLG 285
Query: 261 Q---GPKVSRSMK 270
G ++R+ +
Sbjct: 286 HNSDGKFIARAQR 298
Score = 155 (59.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 48/159 (30%), Positives = 73/159 (45%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSS 185
+ D CG +HTL L +V+S G+G G+ G ++ P LV+ + G ++ +
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYA 389
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
C AVS+ G +F WG + + ES M P+ + G RI +A G S+ +
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNTSR--ESTMY---PKAVQDLCGW-RIRSLACGKSSIIVA 443
Query: 246 NDEGLVYSWG----YGLLGQGPKVSRSMKPTLIPSTLFG 280
DE + SWG +G LG G +S TL G
Sbjct: 444 ADESTI-SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDG 481
Score = 127 (49.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 42/149 (28%), Positives = 63/149 (42%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ G N QLG+ D ++ P R+ + H + + A GR HT+ +TD
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAP--------RLIEALSHEAIVLA--ACGRNHTLALTD 217
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
F FG N GQ G G + +N G+ I CG + ++ + G
Sbjct: 218 TGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYN-----GQPITKMACGAEFSMLMDCKGN 272
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+YS G GQ LGH N + + R +
Sbjct: 273 LYSFGCPEYGQ--LGH--NSDGKFIARAQ 297
Score = 120 (47.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 173 GEIEGERIVKLSSAVDCV---LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKG 228
G + G R+ + S C L ++ +G ++ WG +E GQ+ + + + PR++ +
Sbjct: 141 GCLSGVRVRTVVSG-SCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI-EALS 198
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
IV A G + L D G V+++G +GQ + + +PS Q +N +
Sbjct: 199 HEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ---LGLGNQTDAVPSP--AQIMYNGQP 253
Query: 289 KVESLIAGPCTFGAITNF-GHLYMWGKNQYGQLG 321
+ + G F + + G+LY +G +YGQLG
Sbjct: 254 -ITKMACG-AEFSMLMDCKGNLYSFGCPEYGQLG 285
Score = 92 (37.4 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
DVA G + +L+ + V+SWG+G G G K ++P L F P +
Sbjct: 332 DVACGANHTLVLDSQKRVFSWGFG--GYGRLGHAEQKDEMVPR-LVKLFDF-PGRGATQI 387
Query: 294 IAG-PCTFGAITNFGHLYMWG 313
AG C+F A++ G L+ WG
Sbjct: 388 YAGYTCSF-AVSEVGGLFFWG 407
Score = 46 (21.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
++ WG YG+LG +D+ P
Sbjct: 349 VFSWGFGGYGRLGHAEQKDEMVP 371
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 216 (81.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 82/279 (29%), Positives = 124/279 (44%)
Query: 57 VRIPLPVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
V +P +K S + IK +A G H+ VIT F G+N GQ G + ED
Sbjct: 16 VLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLG--LNHTEDV--- 70
Query: 114 WFCHNIAD-LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
C + L G + + CG D T+ L +G V SCG A GQ G+ ++ PCL+
Sbjct: 71 -LCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISG---PCLIP 126
Query: 173 GEIEG--ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP---RVLSQC- 226
+I+ E+ V +++ + LA ++ G VF WG + + P C
Sbjct: 127 QKIKSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCE 186
Query: 227 -KGVSRIVDVASGGSA-CTMLND--EGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
KG ++ SA T L+ EG +Y WG GQ VS+ + + P +
Sbjct: 187 IKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQ--LVSKEVF-LVEPKKI--DT 241
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
QF K+ ++ +G A T G ++ WG+ YGQLG
Sbjct: 242 QFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLG 280
Score = 188 (71.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG 152
G NS+GQ G G +ED +++ + + I G H+ +T +G+++ CG
Sbjct: 1 GANSYGQLGLG--HKEDVLVPQLLKDVS-CKCQDIKSIAGGGGHSAVITGAGELFVCGHN 57
Query: 153 ADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ GL H ++ C + G + +++ D + + G V G++ +GQ+
Sbjct: 58 KAGQLGLNH--TEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLG 115
Query: 212 ESEMQISTPRVLSQ-CKGVS-RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM 269
QIS P ++ Q K + + V +A+G + GLV+ WG G+ + +V +
Sbjct: 116 VP--QISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGK 173
Query: 270 K-PTLIPSTLFGQHQFNPKSKV-ESLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
P + + + NP + + ++ T + GHLY+WG N++GQL
Sbjct: 174 TLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQL 226
Score = 178 (67.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 98/360 (27%), Positives = 155/360 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I IA G G + V T + + LF CG N QLG N E V+ F L
Sbjct: 32 IKSIAGGGGHSAVITGAGE----LFVCGHNKAGQLGL-------NHTEDVLCFT---LCT 77
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HNIADL 122
++ +A G TI++ + G+N+FGQ G + Q G I L
Sbjct: 78 ALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLG--VPQ---ISGPCLIPQKIKSL 132
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-------ETPCLVRGEI 175
+ EK + G H L TESG V+ G G + H + PC ++G
Sbjct: 133 K-EKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGN- 190
Query: 176 EGERIVKLS-SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-SQCKGVSRIV 233
G + ++S SA L+ + +G ++ WG++++GQ+ E+ + P+ + +Q +I
Sbjct: 191 PGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEVFLVEPKKIDTQFFSHEKIG 250
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKV---SRSMK-PTLIPSTLFGQHQFNP 286
V SG + + G V++WG YG LG+ V R +K + +P + + N
Sbjct: 251 AVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNG 310
Query: 287 KSKVESLIAGPCTFGAITNF---GHLYM-WGKNQYGQLGLGTVEDQ--PFPLKVAVGGQK 340
+ L C G+ N G + WG N++G G GT + P P+K A+G K
Sbjct: 311 NHTI-LLFQIAC--GSEHNLAVVGDCCLSWGWNEHGMCGDGTEANVHVPKPVK-ALGYAK 366
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 223 (83.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 91/352 (25%), Positives = 151/352 (42%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++ + +IACG V+ TK + F G S+ +LG+ P +L+ +
Sbjct: 307 VLDVQNIACGGQHAVLVTKQGES----FSWGEESEGRLGHGVDSNIQQP-KLIDAL---- 357
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+T I+ +A G H+ +T + +T+G FG G G E + W +
Sbjct: 358 -----NTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHG--NEVSH---WVPKRVN 407
Query: 121 DL-EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
L EG + CG HT +T +G++++ G G G G G + P V ++G R
Sbjct: 408 FLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV-DSLKGLR 466
Query: 180 IVKLSSAVDCVLAVSD------------KGDVFGWGNSEYGQISESEMQISTPRVLSQCK 227
V+ + V AV + G +F WG+ + G++ + P+++ C
Sbjct: 467 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKE---PKLVPTC- 522
Query: 228 GVSRIVD-----VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
V+ +V+ VA G S L G VY+ G + GQ + S P+ + G+
Sbjct: 523 -VAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ---LGNSHADGKTPNRVEGKL 578
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
KS VE + G +T+ +Y WGK G+LG G V+D+ P V
Sbjct: 579 H---KSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLV 627
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 82/314 (26%), Positives = 138/314 (43%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPST---QIKHLATGRAHTIVI 83
++G G+ + LG + R+ G+ ++ M + LP ST ++++A G H +++
Sbjct: 269 IWGEGIG-EGVLGGGN-RRVGSSFDIKMDSL---LPKALESTIVLDVQNIACGGQHAVLV 323
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
T +F++G S G+ G G V Q K I L I CG+ H+ +T S
Sbjct: 324 TKQGESFSWGEESEGRLGHG-VDSNIQQPKL----IDALNTTNIELVACGEFHSCAVTLS 378
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G +Y+ G G G G G+ + P V +EG + ++ V+ G +F +G
Sbjct: 379 GDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFG 438
Query: 204 NSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASG------------GSACTMLNDEGL 250
+ +G + + + + PR + KG+ R V A G GS+ + G
Sbjct: 439 DGTFGVLGHGDKKSVFIPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 497
Query: 251 VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+++WG G LG G K +P L+P+ + + N + G A+T G
Sbjct: 498 LFTWGDGDKGRLGHGNK-----EPKLVPTCVAALVEPN----FCQVACGHSLTVALTTSG 548
Query: 308 HLYMWGKNQYGQLG 321
H+Y G YGQLG
Sbjct: 549 HVYTMGSPVYGQLG 562
Score = 193 (73.0 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 65/225 (28%), Positives = 99/225 (44%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+ +A G HT V+T FTFG+ +FG G G D + + + L+G + +
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG-----DKKSVFIPREVDSLKGLRTVR 469
Query: 130 AVCGQDHTLFLTE------------SGKVYSCGWGADGQTG-LGHLNNQE--TPCLVRGE 174
A CG HT + E SGK+++ WG DG G LGH N + P V
Sbjct: 470 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFT--WG-DGDKGRLGHGNKEPKLVPTCVAAL 526
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
+E +++ +A++ G V+ G+ YGQ+ S TP + S + +
Sbjct: 527 VE-PNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEE 585
Query: 235 VASGGSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPS 276
+A G +L VY+WG G LG G R+ PTL+ S
Sbjct: 586 IACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN-SPTLVES 629
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/221 (24%), Positives = 100/221 (45%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSS 185
+ + CG H + +T+ G+ +S G ++G+ G G +N + P L+ +V
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 369
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTP-RVLSQCKGVSRIVDVASGGSACT 243
C + +S GD++ WG ++G + +E+ P RV +G+ + +A G
Sbjct: 370 FHSCAVTLS--GDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGI-HVSSIACGPYHTA 426
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK------SKVESLI 294
++ G ++++G +G+LG G K S + P + S L G + V ++
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFI-PREVDS-LKGLRTVRAACGVWHTAAVVEVM 484
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
G + ++ G L+ WG G+LG G E + P VA
Sbjct: 485 VGSSSSSNCSS-GKLFTWGDGDKGRLGHGNKEPKLVPTCVA 524
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/262 (22%), Positives = 112/262 (42%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELV----MSFV 57
I ++ IACG T V T + +LF G + LG+ D + P E+ + V
Sbjct: 413 IHVSSIACGPYHTAVVTSAG----QLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTV 468
Query: 58 RIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
R V H + ++ + G + + + + FT+G+ G+ G G + + K
Sbjct: 469 RAACGVWHTAAVVE-VMVGSSSSSNCSSGK-LFTWGDGDKGRLGHG-----NKEPKLVPT 521
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+A L CG T+ LT SG VY+ G GQ G H + + TP V G++
Sbjct: 522 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGK-TPNRVEGKLHK 580
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVA 236
+ +++ V ++ + +V+ WG G++ ++ ++P ++ K ++ +A
Sbjct: 581 SFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKD-KQVKSIA 639
Query: 237 SGGSACTMLNDEGLVYSWGYGL 258
G T ++ W G+
Sbjct: 640 CG----TNFTAAVCIHRWASGM 657
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 41/139 (29%), Positives = 59/139 (42%)
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY-- 256
V G GN G + +M P+ L V + ++A GG ++ +G +SWG
Sbjct: 278 VLGGGNRRVGSSFDIKMDSLLPKALESTI-VLDVQNIACGGQHAVLVTKQGESFSWGEES 336
Query: 257 -GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKN 315
G LG G S +P LI + N + +E + G A+T G LY WGK
Sbjct: 337 EGRLGHGVD-SNIQQPKLIDA-------LNT-TNIELVACGEFHSCAVTLSGDLYTWGKG 387
Query: 316 QYGQLGLGTVEDQPFPLKV 334
+G LG G P +V
Sbjct: 388 DFGVLGHGNEVSHWVPKRV 406
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 223 (83.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 66/264 (25%), Positives = 124/264 (46%)
Query: 66 PSTQIKHLATGRA---HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
P IK +++ + HT+ T F++G+ +G+ G G + Y K L
Sbjct: 453 PHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQ---GPL 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
+G+ ++ G H+ +TE G++Y+ G G G+ G G N++ P LV+ +I + +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGE 565
Query: 183 LSSAVDCVLAVSDKG-DVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGS 240
+S +A+S G V+ +G + G++ + ++ P+V+ +G+ I V +G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMF-IRKVCAGSQ 624
Query: 241 ACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCT 299
+ L G VY+WG G LG G + +++P LI +++ + G
Sbjct: 625 SSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA--------ATRIVDISIGDSH 676
Query: 300 FGAITNFGHLYMWGKNQYGQLGLG 323
++++ +Y WG N GQ G G
Sbjct: 677 CLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 221 (82.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 58 RIPLPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+I P PS + + + G+ T VI+ + G S+G+ G G + K
Sbjct: 392 KILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
++ K+ + HTL T G+V+S G G G+ G G+ + Q+ P L++G ++
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
G+ +V +S+ AV++ G+++ WG ++G++ + ++ + + K +S + +V+
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDS--NSRNIPTLVKDISNVGEVS 567
Query: 237 SGGSACTMLNDEG-LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G S L+ +G V+S+G G LG G +R KP +I + Q F +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGD-TNRVYKPKVIEAL---QGMF-----IRK 618
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
+ AG + A+T+ G +Y WG LG G+ E
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSE 650
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H+ +T++ +T+G FG+ G G D + + D+ + + C
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHG-----DSNSRNIPTLVKDISN--VGEVSC 568
Query: 133 GQDHTLFLTESGK-VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G HT+ L++ G+ V+S G G +G+ G G N P ++ ++G I K+ + L
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSL 627
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
A++ G V+ WG SE P+++ + +RIVD++ G S C L+ + V
Sbjct: 628 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL-AATRIVDISIGDSHCLSLSHDNEV 686
Query: 252 YSWG---YGLLGQGPKVSRSMKP 271
Y+WG G GQG KP
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKP 709
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-L 245
C +S G V G YG++ +S Q + ++ + + V + G T+
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
EG V+SWG YG LG G S P LI L G+ V + AG A
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNS-STQKYPKLIQGPLQGK-------VVVCVSAGYRHSAA 525
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G LY WG+ +G+LG G + P V
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 222 (83.2 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 65/234 (27%), Positives = 121/234 (51%)
Query: 52 LVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
LVM + P+K + Q+ +A G H++ +T++ F +G N+ GQ G +++E
Sbjct: 99 LVMDQSTVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG---LRKEQ- 154
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETP 168
G ++ L G + G +H+ L+ SG V+ GWG++ GQ GLG ++ P
Sbjct: 155 AGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVF--GWGSNSAGQLGLGDTTDRFIP 212
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCK 227
+V+ + G++ V +S + +S G VF +G+ +GQ+ + ++ PR++++
Sbjct: 213 TIVKS-LSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW 271
Query: 228 GVSRIVDVASGGSACTMLNDEG-LVYSWGYGL---LGQGPKVSRSMK-PTLIPS 276
G S++ V G + D +YS+G G+ LG G +V +S+ P L+P+
Sbjct: 272 G-SKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPT 324
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 58/225 (25%), Positives = 107/225 (47%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ E+I VCG+ + L + GKV + +Q T C +E +++
Sbjct: 74 LQNERIRSIVCGEAGAVLLADDGKVL--------------VMDQSTVCRPLKGLENRQVI 119
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGG 239
+++ +A+++ G +F WG + GQ+ + Q T P+ L G+ + +++GG
Sbjct: 120 QIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIP-VAQISAGG 178
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
+ +L+ G+V+ WG G LG G R + PT++ S L G+ K S+ G
Sbjct: 179 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI-PTIVKS-LSGK-------KTVSISCG 229
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQK 340
++ G ++ +G +GQLG +++D+ P VA + G K
Sbjct: 230 GEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSK 274
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 60/224 (26%), Positives = 101/224 (45%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGE 174
C + LE +++ CG H++ LT G+++ G A GQ GL ++P ++
Sbjct: 107 CRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQS- 165
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV 233
+ G + ++S+ + +S G VFGWG++ GQ+ + P ++ G + V
Sbjct: 166 LCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSG-KKTV 224
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPK-VSRSMKPTLIPSTLFGQHQFNPKSKVE 291
++ GG L+ G V+++G G GQ G + P L+ + L+G SKV
Sbjct: 225 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLV-AELWG-------SKVS 276
Query: 292 SLIAGPC-TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G T + +Y +G GQLG G Q PL V
Sbjct: 277 QVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPV 320
Score = 156 (60.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 51/197 (25%), Positives = 90/197 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G N+ QLG + + + S IP + ++ G H+ V++
Sbjct: 136 QLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIP---------VAQISAGGNHSFVLSL 186
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F +G+NS GQ G G D ++ + L G+K + CG +HT L++ G
Sbjct: 187 SGVVFGWGSNSAGQLGLG-----DTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGT 241
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD-VFGWGN 204
V++ G G GQ G L ++ P LV E+ G ++ +++ L D + ++ +G
Sbjct: 242 VFTFGSGGFGQLGHNSLKDEHHPRLV-AELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGC 300
Query: 205 SEYGQISESE-MQISTP 220
GQ+ E ++ S P
Sbjct: 301 GMQGQLGNGEQVKQSVP 317
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 217 (81.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 78/278 (28%), Positives = 127/278 (45%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD--LE-GEK 126
I L + H ++T+ G + +G N G+ G G E Q N LE G++
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFFPYLLERGDR 238
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-----RIV 181
I+ + + T G VY G+ G+ GL ++ P + + E I+
Sbjct: 239 IVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYII 298
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVL--SQCKGV----SRIVD 234
++ LA++ G ++ WG + YGQ+ + Q + P +L ++ G+ RI++
Sbjct: 299 QVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIE 358
Query: 235 VASGGSACTMLNDEGLVYSWGYG-LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+ +GG+ ++G +Y WG LL +G R P L+ F + VE L
Sbjct: 359 LIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRH-HPMLLTENYFPGLRRRGDHLVE-L 416
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGT--VEDQP 329
IAGP A T G++Y WG+N YGQLGLG ++ QP
Sbjct: 417 IAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQP 454
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 53/202 (26%), Positives = 90/202 (44%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N +LG D + + +P+EL F P HP I + G HT+ +T +
Sbjct: 262 GFNYRGRLGLDDEQDRLHPVELSWDF----FPEWHPDDYIIQVVVGDRHTLALTQLGYIY 317
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL--EGEKIMDAVCGQDHTLFLTESGKVYS 148
+G NS+GQ G Q+ + + L ++I++ + G +L TE G +Y
Sbjct: 318 AWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYI 377
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEI------EGERIVKLSSAVDCVLAVSDKGDVFGW 202
WGA G + P L+ G+ +V+L + D LA +++G ++ W
Sbjct: 378 --WGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYAW 435
Query: 203 GNSEYGQISESEMQIST-PRVL 223
G + YGQ+ + +I P +L
Sbjct: 436 GRNYYGQLGLGDRRIQRQPALL 457
Score = 152 (58.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 62/270 (22%), Positives = 113/270 (41%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-IADLEGEKIM------DAV 131
+++V G + +GNN GQ G + E + + I ++ + + D +
Sbjct: 79 YSLVWIARAGVWGWGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFL 138
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G+ +L T G+++ W T + ++ V IV+L S
Sbjct: 139 SGKARSLVATRQGQLHEYYWERISNTRSEFIQHRHYELNVT-------IVQLLSDYRHAF 191
Query: 192 AVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQ------CKGVSRIVDVASGGSACTM 244
++++G ++GWG + G++ + + S P L Q + RIV +
Sbjct: 192 ILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVA 251
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+G VY WG+ G LG + R + P + F + ++P + ++ G
Sbjct: 252 RTAQGHVYVWGFNYRGRLGLDDEQDR-LHPVELSWDFFPE--WHPDDYIIQVVVGDRHTL 308
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G++Y WGKN YGQLG +D+ P
Sbjct: 309 ALTQLGYIYAWGKNSYGQLGFRDQQDRNRP 338
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
IV + S +L +EG +Y WG+ G LG G + RS +PT +P F +
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFF-PYLLERGD 237
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ L A T GH+Y+WG N G+LGL +D+ P++++
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELS 284
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 217 (81.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 78/278 (28%), Positives = 127/278 (45%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIAD--LE-GEK 126
I L + H ++T+ G + +G N G+ G G E Q N LE G++
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFFPYLLERGDR 238
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE-----RIV 181
I+ + + T G VY G+ G+ GL ++ P + + E I+
Sbjct: 239 IVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYII 298
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVL--SQCKGV----SRIVD 234
++ LA++ G ++ WG + YGQ+ + Q + P +L ++ G+ RI++
Sbjct: 299 QVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIE 358
Query: 235 VASGGSACTMLNDEGLVYSWGYG-LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
+ +GG+ ++G +Y WG LL +G R P L+ F + VE L
Sbjct: 359 LIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRH-HPMLLTENYFPGLRRRGDHLVE-L 416
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGT--VEDQP 329
IAGP A T G++Y WG+N YGQLGLG ++ QP
Sbjct: 417 IAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQP 454
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 53/202 (26%), Positives = 90/202 (44%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G N +LG D + + +P+EL F P HP I + G HT+ +T +
Sbjct: 262 GFNYRGRLGLDDEQDRLHPVELSWDF----FPEWHPDDYIIQVVVGDRHTLALTQLGYIY 317
Query: 91 TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL--EGEKIMDAVCGQDHTLFLTESGKVYS 148
+G NS+GQ G Q+ + + L ++I++ + G +L TE G +Y
Sbjct: 318 AWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYI 377
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEI------EGERIVKLSSAVDCVLAVSDKGDVFGW 202
WGA G + P L+ G+ +V+L + D LA +++G ++ W
Sbjct: 378 --WGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYAW 435
Query: 203 GNSEYGQISESEMQIST-PRVL 223
G + YGQ+ + +I P +L
Sbjct: 436 GRNYYGQLGLGDRRIQRQPALL 457
Score = 152 (58.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 62/270 (22%), Positives = 113/270 (41%)
Query: 79 HTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN-IADLEGEKIM------DAV 131
+++V G + +GNN GQ G + E + + I ++ + + D +
Sbjct: 79 YSLVWIARAGVWGWGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFL 138
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
G+ +L T G+++ W T + ++ V IV+L S
Sbjct: 139 SGKARSLVATRQGQLHEYYWERISNTRSEFIQHRHYELNVT-------IVQLLSDYRHAF 191
Query: 192 AVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQ------CKGVSRIVDVASGGSACTM 244
++++G ++GWG + G++ + + S P L Q + RIV +
Sbjct: 192 ILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVA 251
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+G VY WG+ G LG + R + P + F + ++P + ++ G
Sbjct: 252 RTAQGHVYVWGFNYRGRLGLDDEQDR-LHPVELSWDFFPE--WHPDDYIIQVVVGDRHTL 308
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+T G++Y WGKN YGQLG +D+ P
Sbjct: 309 ALTQLGYIYAWGKNSYGQLGFRDQQDRNRP 338
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
IV + S +L +EG +Y WG+ G LG G + RS +PT +P F +
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFF-PYLLERGD 237
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
++ L A T GH+Y+WG N G+LGL +D+ P++++
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELS 284
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 221 (82.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 74/260 (28%), Positives = 121/260 (46%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRI-PLPVKHPSTQIKHLATGRAHTIV 82
N ++ CG N QLG ++G P + RI L H + ++ G+ H++
Sbjct: 41 NGQVHSCGDNGRGQLG-----QRGAPCSAQLK-ERIRALETLH----VDLVSCGKEHSLA 90
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
+ F +G S GQ G G +E + I L KI CG H+L L+E
Sbjct: 91 VCHKGRVFAWGAGSEGQLGTGEFKETNL----IPMKIKTLNDIKIKQVSCGHYHSLALSE 146
Query: 143 SGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G+V+S G +DGQ GLG +Q +P VR ++G + ++++ A+S G FG
Sbjct: 147 GGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS-LDGIPLAQVAAGGAHSFALSLSGTSFG 205
Query: 202 WGNSEYGQISESEMQIS----TPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
WG + GQ++ + +S P +S K + ++ ++ G +L G V+++G
Sbjct: 206 WGRNNAGQLALHKNNVSGQSYKPYSISALKNLG-VIYISCGYEHTVVLTQNGKVFTFGDN 264
Query: 256 -YGLLGQGPKVSRSMKPTLI 274
YG LG P +S P L+
Sbjct: 265 TYGQLGHSPTAEKS-GPQLV 283
Score = 201 (75.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 77/278 (27%), Positives = 128/278 (46%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG-RGIVQEEDYQGKWFCHNIADLEGEKI 127
+++ A+G H++++ N + G+N GQ G RG + + I LE +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKER-----IRALETLHV 78
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
CG++H+L + G+V++ G G++GQ G G +ET L+ +I+ +K+ V
Sbjct: 79 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEF--KETN-LIPMKIKTLNDIKIKQ-V 134
Query: 188 DC----VLAVSDKGDVFGWGNSEYGQISESEM---QISTPRVLSQCKGVSRIVDVASGGS 240
C LA+S+ G VF WG++ GQ+ + Q S RV S G+ + VA+GG+
Sbjct: 135 SCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS-LDGIP-LAQVAAGGA 192
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS----KVESLIAG 296
L+ G + WG GQ L + + GQ + P S K +I
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQ---------LALHKNNVSGQ-SYKPYSISALKNLGVIYI 242
Query: 297 PCTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
C + +T G ++ +G N YGQLG ++ P
Sbjct: 243 SCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGP 280
Score = 184 (69.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 69/214 (32%), Positives = 101/214 (47%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L G ++ A G+ H+L L +G+V+SCG G G L + PC +++ ERI
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCG-----DNGRGQLGQRGAPC--SAQLK-ERIR 71
Query: 182 KLSSA-VDCV-------LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS--R 231
L + VD V LAV KG VF WG GQ+ E + T + + K ++ +
Sbjct: 72 ALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFK-ETNLIPMKIKTLNDIK 130
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I V+ G L++ G V+SWG G LG G K P + S L G P +
Sbjct: 131 IKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS-LDGI----PLA 185
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
+V + G +F A++ G + WG+N GQL L
Sbjct: 186 QVAA--GGAHSF-ALSLSGTSFGWGRNNAGQLAL 216
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 65/232 (28%), Positives = 109/232 (46%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDP-RKKGNPLELVMSFVRIP 60
IKI ++CG+ ++ ++ ++F G NSD QLG + +P + V S IP
Sbjct: 129 IKIKQVSCGHYHSLALSEGG----QVFSWGSNSDGQLGLGKKFPSQASP-QRVRSLDGIP 183
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HNI 119
L Q+ A G AH+ ++ + +F +G N+ GQ + + + G+ + ++I
Sbjct: 184 L------AQV---AAGGAHSFALSLSGTSFGWGRNNAGQLA---LHKNNVSGQSYKPYSI 231
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ L+ ++ CG +HT+ LT++GKV++ G GQ G + P LV G I+G
Sbjct: 232 SALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG-IDG-- 288
Query: 180 IVKLSSAVDC----VLA-VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC 226
L S +DC LA V G V +G + S + + T V C
Sbjct: 289 ---LVSQIDCGSYHTLAYVYTTGKVVSFGREPTCKSSPTHPEALTENVDFTC 337
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 220 (82.5 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 70/268 (26%), Positives = 112/268 (41%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H++ + + +++G N FG+ G G+ G G +
Sbjct: 246 ISAGEMHSVALKADGSLWSWGQNLFGELGNGVA----LPGANVTTPTRVGTGSDWVAIAA 301
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G HT+ L +G V + G A G G G + N+ TP L+ + V +++ +
Sbjct: 302 GALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFS 361
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
V G VFGWG + GQ+ ++ P VLS G S + V GG+ L G +
Sbjct: 362 VLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSA--GASAWLGVEPGGAFSLGLRSNGTL 419
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WG G LG G + P+ IP + G + G A+ G
Sbjct: 420 WAWGGNASGQLGDG-----TTTPSAIPVPVVGG-----AGNWRTTATGTAHSVAVRADGT 469
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
L+ WG N GQLG+G+ P ++ V
Sbjct: 470 LWAWGDNSSGQLGIGSTVAASTPQQITV 497
Score = 174 (66.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 67/263 (25%), Positives = 111/263 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQEEDYQ--GKWFCHNIADLEGE 125
+ H+A G H + + + + G+N FGQ G GI + Q G W
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----------- 82
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEI-EGERIVKL 183
K + A G H+L + G +++ G GQ G +N Q T I G V +
Sbjct: 83 KTVAA--GTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAV 140
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKGVSRIVDVASGGS 240
S+ + G ++ WGN+ +G++ + +S P+ V++ R V VA+GG
Sbjct: 141 SAGELTSFGLKGDGTLWSWGNNLFGELGDGTT-VSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L +G +++WG L GQ + P P + + ++ AG
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWT------AISAGEMHS 253
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
A+ G L+ WG+N +G+LG G
Sbjct: 254 VALKADGSLWSWGQNLFGELGNG 276
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 84/323 (26%), Positives = 130/323 (40%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
F GL S+ L G + + IP+PV + + ATG AH++ + +
Sbjct: 409 FSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADG 468
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKV 146
+ +G+NS GQ G G + N A + AV G H+L L G +
Sbjct: 469 TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGND--WTAVAGGGAHSLGLKADGTL 526
Query: 147 YSCGWGADGQTGLGH-LNNQETPCLV----RGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
+S G GQ G G +N+ TP + G + + + V LA+ G ++
Sbjct: 527 WSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFS-LALQADGTIWT 585
Query: 202 WGNSEYGQI-SESEM-----QISTPRVLSQCKGVSRI-----VDVASGGSACTMLNDEGL 250
WG++ Q+ ++ M Q + P L+ S V +A+G L +G
Sbjct: 586 WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGT 645
Query: 251 VYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+++WG +GQ G V+ + T P + P SL AG A + G L
Sbjct: 646 LWAWGANSVGQLGNGVTTA---TFTPVQVINAEGV-P---YVSLAAGTSHSLAGRSDGTL 698
Query: 310 YMWGKNQYGQLGLGTVEDQPFPL 332
+ WG N GQLG G PL
Sbjct: 699 WAWGNNTSGQLGTGPHPGDADPL 721
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 73/276 (26%), Positives = 112/276 (40%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-G-EKIMDA 130
+A G H + + + + +G N GQ G G G N L+ G ++ A
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTG--------GTGILPNPTPLKIGTDRDWTA 245
Query: 131 V-CGQDHTLFLTESGKVYSCGWGADGQTGLGHL---NNQETPCLVRGEIEGERIVKLSSA 186
+ G+ H++ L G ++S G G+ G G N TP V G G V +++
Sbjct: 246 ISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRV-GT--GSDWVAIAAG 302
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A+ G V WGN+ G + + + STP ++ + V +A+G +
Sbjct: 303 ALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSV 362
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G V+ WG G LG G PT++ + P G + G
Sbjct: 363 LANGTVFGWGGNGAGQLGNGT-FGAVTAPTVLSAGASAWLGVEP--------GGAFSLGL 413
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+N G L+ WG N GQLG GT P+ V VGG
Sbjct: 414 RSN-GTLWAWGGNASGQLGDGTTTPSAIPVPV-VGG 447
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
V +++ D L++ G ++ WG + GQ+ + TP + +GV V +A+G
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVP-YVSLAAGT 686
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRS----MKPTLIPSTLFGQHQFNPKSKVES 292
S +G +++WG G LG GP + +P +P+ + NP S +
Sbjct: 687 SHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTS---NPVSAADD 743
Query: 293 LI---AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ AG A+ + G L+ WG+N GQLG GT + P
Sbjct: 744 WLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 81/345 (23%), Positives = 134/345 (38%)
Query: 7 IACGYG--FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
IA G G F+V+A N +FG G N QLG G V P +
Sbjct: 352 IAAGTGVSFSVLA------NGTVFGWGGNGAGQLG------NGT-----FGAVTAPTVLS 394
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
++ + G A ++ + N + +G N+ GQ G G + G
Sbjct: 395 AGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVP-----VVGGAG 449
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP---CLVRGEIEGERIV 181
A G H++ + G +++ G + GQ G+G TP + G
Sbjct: 450 NWRTTAT-GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWT 508
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTP-RVLSQCKG-VSRI-VDVA 236
++ L + G ++ WG++ +GQ+ + +TP ++++ G R V VA
Sbjct: 509 AVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVA 568
Query: 237 SGGSACTMLNDEGLVYSWGYGLL---GQGPKVSRSMKPTLIPSTLF----GQHQFNPKSK 289
+GG L +G +++WG L G P + +P+ L FN S
Sbjct: 569 AGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFN--SS 626
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ AG ++ G L+ WG N GQLG G P++V
Sbjct: 627 WVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQV 671
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 36/145 (24%), Positives = 69/145 (47%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
VL + G ++ G++++GQ+ + T V Q G + V A+G + + +G
Sbjct: 44 VLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPV--QVPGTWKTV--AAGTTHSLGIKADG 99
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+++WG L GQ + + + + + F + + ++ AG T + G L
Sbjct: 100 SLWAWGSNLFGQ---LGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTL 156
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG N +G+LG GT +P P++V
Sbjct: 157 WSWGNNLFGELGDGTTVSRPQPVQV 181
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 220 (82.5 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 70/268 (26%), Positives = 112/268 (41%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++ G H++ + + +++G N FG+ G G+ G G +
Sbjct: 246 ISAGEMHSVALKADGSLWSWGQNLFGELGNGVA----LPGANVTTPTRVGTGSDWVAIAA 301
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G HT+ L +G V + G A G G G + N+ TP L+ + V +++ +
Sbjct: 302 GALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFS 361
Query: 193 VSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
V G VFGWG + GQ+ ++ P VLS G S + V GG+ L G +
Sbjct: 362 VLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSA--GASAWLGVEPGGAFSLGLRSNGTL 419
Query: 252 YSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++WG G LG G + P+ IP + G + G A+ G
Sbjct: 420 WAWGGNASGQLGDG-----TTTPSAIPVPVVGG-----AGNWRTTATGTAHSVAVRADGT 469
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
L+ WG N GQLG+G+ P ++ V
Sbjct: 470 LWAWGDNSSGQLGIGSTVAASTPQQITV 497
Score = 174 (66.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 67/263 (25%), Positives = 111/263 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQEEDYQ--GKWFCHNIADLEGE 125
+ H+A G H + + + + G+N FGQ G GI + Q G W
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----------- 82
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGEI-EGERIVKL 183
K + A G H+L + G +++ G GQ G +N Q T I G V +
Sbjct: 83 KTVAA--GTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAV 140
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKGVSRIVDVASGGS 240
S+ + G ++ WGN+ +G++ + +S P+ V++ R V VA+GG
Sbjct: 141 SAGELTSFGLKGDGTLWSWGNNLFGELGDGTT-VSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 241 ACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
L +G +++WG L GQ + P P + + ++ AG
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWT------AISAGEMHS 253
Query: 301 GAITNFGHLYMWGKNQYGQLGLG 323
A+ G L+ WG+N +G+LG G
Sbjct: 254 VALKADGSLWSWGQNLFGELGNG 276
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 84/323 (26%), Positives = 130/323 (40%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
F GL S+ L G + + IP+PV + + ATG AH++ + +
Sbjct: 409 FSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADG 468
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD-HTLFLTESGKV 146
+ +G+NS GQ G G + N A + AV G H+L L G +
Sbjct: 469 TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGND--WTAVAGGGAHSLGLKADGTL 526
Query: 147 YSCGWGADGQTGLGH-LNNQETPCLV----RGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
+S G GQ G G +N+ TP + G + + + V LA+ G ++
Sbjct: 527 WSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFS-LALQADGTIWT 585
Query: 202 WGNSEYGQI-SESEM-----QISTPRVLSQCKGVSRI-----VDVASGGSACTMLNDEGL 250
WG++ Q+ ++ M Q + P L+ S V +A+G L +G
Sbjct: 586 WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGT 645
Query: 251 VYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+++WG +GQ G V+ + T P + P SL AG A + G L
Sbjct: 646 LWAWGANSVGQLGNGVTTA---TFTPVQVINAEGV-P---YVSLAAGTSHSLAGRSDGTL 698
Query: 310 YMWGKNQYGQLGLGTVEDQPFPL 332
+ WG N GQLG G PL
Sbjct: 699 WAWGNNTSGQLGTGPHPGDADPL 721
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 73/276 (26%), Positives = 112/276 (40%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-G-EKIMDA 130
+A G H + + + + +G N GQ G G G N L+ G ++ A
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTG--------GTGILPNPTPLKIGTDRDWTA 245
Query: 131 V-CGQDHTLFLTESGKVYSCGWGADGQTGLGHL---NNQETPCLVRGEIEGERIVKLSSA 186
+ G+ H++ L G ++S G G+ G G N TP V G G V +++
Sbjct: 246 ISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRV-GT--GSDWVAIAAG 302
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTML 245
+A+ G V WGN+ G + + + STP ++ + V +A+G +
Sbjct: 303 ALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSV 362
Query: 246 NDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
G V+ WG G LG G PT++ + P G + G
Sbjct: 363 LANGTVFGWGGNGAGQLGNGT-FGAVTAPTVLSAGASAWLGVEP--------GGAFSLGL 413
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGG 338
+N G L+ WG N GQLG GT P+ V VGG
Sbjct: 414 RSN-GTLWAWGGNASGQLGDGTTTPSAIPVPV-VGG 447
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
V +++ D L++ G ++ WG + GQ+ + TP + +GV V +A+G
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVP-YVSLAAGT 686
Query: 240 SACTMLNDEGLVYSWGY---GLLGQGPKVSRS----MKPTLIPSTLFGQHQFNPKSKVES 292
S +G +++WG G LG GP + +P +P+ + NP S +
Sbjct: 687 SHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTS---NPVSAADD 743
Query: 293 LI---AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ AG A+ + G L+ WG+N GQLG GT + P
Sbjct: 744 WLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 81/345 (23%), Positives = 134/345 (38%)
Query: 7 IACGYG--FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK 64
IA G G F+V+A N +FG G N QLG G V P +
Sbjct: 352 IAAGTGVSFSVLA------NGTVFGWGGNGAGQLG------NGT-----FGAVTAPTVLS 394
Query: 65 HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
++ + G A ++ + N + +G N+ GQ G G + G
Sbjct: 395 AGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVP-----VVGGAG 449
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP---CLVRGEIEGERIV 181
A G H++ + G +++ G + GQ G+G TP + G
Sbjct: 450 NWRTTAT-GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWT 508
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE--MQISTP-RVLSQCKG-VSRI-VDVA 236
++ L + G ++ WG++ +GQ+ + +TP ++++ G R V VA
Sbjct: 509 AVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVA 568
Query: 237 SGGSACTMLNDEGLVYSWGYGLL---GQGPKVSRSMKPTLIPSTLF----GQHQFNPKSK 289
+GG L +G +++WG L G P + +P+ L FN S
Sbjct: 569 AGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFN--SS 626
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ AG ++ G L+ WG N GQLG G P++V
Sbjct: 627 WVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQV 671
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 36/145 (24%), Positives = 69/145 (47%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
VL + G ++ G++++GQ+ + T V Q G + V A+G + + +G
Sbjct: 44 VLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPV--QVPGTWKTV--AAGTTHSLGIKADG 99
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
+++WG L GQ + + + + + F + + ++ AG T + G L
Sbjct: 100 SLWAWGSNLFGQ---LGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTL 156
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG N +G+LG GT +P P++V
Sbjct: 157 WSWGNNLFGELGDGTTVSRPQPVQV 181
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 216 (81.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 95/358 (26%), Positives = 154/358 (43%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++ + IACG + ++ + +F G S +LG+ + P +L+ S
Sbjct: 271 VLDVHHIACGVKHAALVSRQGE----VFTWGEASGGRLGHGMGKDVTGP-QLIESLA--- 322
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+T I +A G HT +T +T+G+ G G++ W I+
Sbjct: 323 ------ATSIDFVACGEFHTCAVTMTGEIYTWGD---GTHNAGLLGHGTDVSHWIPKRIS 373
Query: 121 D-LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-LGHLNNQETPCLVRGEIE-- 176
LEG +I CG HT +T +G++++ G DG G LGH ++ET R E+E
Sbjct: 374 GPLEGLQIASVSCGPWHTALITSTGQLFTFG---DGTFGVLGH-GDKETVFYPR-EVESL 428
Query: 177 -GERIVKLS-------SAVDCVLAVSDK----GDVFGWGNSEYGQISESEMQISTPRVLS 224
G R + ++ + V+ ++ S G +F WG+ + ++ + + PR+
Sbjct: 429 SGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKE---PRLKP 485
Query: 225 QCKGVSRIVD-----VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
C VS ++D VA G S L G VY+ G YG LG P + P L+
Sbjct: 486 TC--VSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGN-PNADGKL-PCLVED 541
Query: 277 TLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L K VE + G +T+ ++ WGK G+LG G VED+ P V
Sbjct: 542 KL-------TKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLV 592
Score = 147 (56.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 56/244 (22%), Positives = 109/244 (44%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELV-MSFVR-- 58
++I ++CG T + T + +LF G + LG+ D P E+ +S +R
Sbjct: 379 LQIASVSCGPWHTALITSTG----QLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTI 434
Query: 59 -IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH 117
+ V H + ++ + T H+ + FT+G+ + G G +++ + K C
Sbjct: 435 AVACGVWHAAAIVEVIVT---HSSSSVSSGKLFTWGDGDKSRLGHG---DKEPRLKPTC- 487
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIE 176
++ L CG T+ LT SGKVY+ G GQ LG+ N + + PCLV ++
Sbjct: 488 -VSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQ--LGNPNADGKLPCLVEDKLT 544
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
+ + +++ V ++ + +VF WG G++ +++ L + ++A
Sbjct: 545 KDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIA 604
Query: 237 SGGS 240
G +
Sbjct: 605 CGSN 608
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 86/329 (26%), Positives = 141/329 (42%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
++F GLN QLG D V S PL V I H++ G H+ IT
Sbjct: 102 RVFATGLNDCGQLGVSD----------VKSHAMDPLEVSGLDKDILHISAGYYHSAAITV 151
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ + +G NS GQ G G ++ + + L G I G +H++ +T+ G+
Sbjct: 152 DGELYMWGKNSSGQLGLG---KKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGE 208
Query: 146 VYSCGWGADGQTGLGHL---------NNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDK 196
V S G G G+ G GH N++ TP L++ E+EG ++ +++ + +
Sbjct: 209 VLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIK-ELEGIKVTNVAAGLLHSACTDEN 267
Query: 197 GDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
G F +G ++ ++ +TP ++S+ V +VA GG ++ G +Y+WG
Sbjct: 268 GSAFMFGEKSINKMGFGGVRNATTPSIISE---VPYAEEVACGGYHTCVVTRGGELYTWG 324
Query: 256 Y---GLLG-QGPKVSRS---MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G LG VS S ++ + ST+ Q K T+G + G
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTV-SQVSCGWKHTAAISDNNVFTWGWGGSHGT 383
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ G + GQLG G+ D P V +G
Sbjct: 384 FSVDGHSSGGQLGHGSDVDYARPAMVDLG 412
Score = 185 (70.2 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 71/282 (25%), Positives = 120/282 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
I +A G AHT+ +T+ F G N GQ G V+ ++ L+ + I+
Sbjct: 84 ITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPL----EVSGLDKD-ILH 138
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ--ETPCLVRGEIEGERIVKLSSAV 187
G H+ +T G++Y G + GQ GLG + P V + G I ++
Sbjct: 139 ISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEA-LHGITIQSVALGS 197
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQIS----------TPRVLSQCKGVSRIVDVAS 237
+ +AV+D G+V WG G++ TPR++ + +G+ ++ +VA+
Sbjct: 198 EHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGI-KVTNVAA 256
Query: 238 G--GSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G SACT ++ G + +G +G G V + P++I + E
Sbjct: 257 GLLHSACT--DENGSAFMFGEKSINKMGFGG-VRNATTPSIISEVPYA----------EE 303
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G +T G LY WG N+ G LG + P++V
Sbjct: 304 VACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRV 345
Score = 181 (68.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 63/255 (24%), Positives = 110/255 (43%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYS 148
A +G+ +G+ G G + +W + L I CG HTLFLTE+ +V++
Sbjct: 51 AAMWGSGDYGRLGLG-----NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFA 105
Query: 149 CGWGADGQTGLGHLNNQETPCLVRGEIEG--ERIVKLSSAVDCVLAVSDKGDVFGWGNSE 206
G GQ G+ + + L E+ G + I+ +S+ A++ G+++ WG +
Sbjct: 106 TGLNDCGQLGVSDVKSHAMDPL---EVSGLDKDILHISAGYYHSAAITVDGELYMWGKNS 162
Query: 207 YGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGP 263
GQ+ ++ + P + G++ I VA G + D G V SWG G G G
Sbjct: 163 SGQLGLGKKAARVVRVPTKVEALHGIT-IQSVALGSEHSVAVTDGGEVLSWGGG--GSG- 218
Query: 264 KVSRSMKPTLIPSTLFGQHQFNPKS-------KVESLIAGPCTFGAITNFGHLYMWGKNQ 316
++ + +L L +F P+ KV ++ AG G +M+G+
Sbjct: 219 RLGHGHQSSLF-GILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKS 277
Query: 317 YGQLGLGTVEDQPFP 331
++G G V + P
Sbjct: 278 INKMGFGGVRNATTP 292
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 141 TESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD 198
+ESGK ++ WG+ G+ GLG+L++Q TP V + I ++ L +++
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLDSQWTPA-VCSALSDHSITAVACGGAHTLFLTETRR 102
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGY- 256
VF G ++ GQ+ S+++ L + G+ + I+ +++G + +G +Y WG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPL-EVSGLDKDILHISAGYYHSAAITVDGELYMWGKN 161
Query: 257 --GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGK 314
G LG G K +R ++ +P+ + H ++S+ G A+T+ G + WG
Sbjct: 162 SSGQLGLGKKAARVVR---VPTKVEALHGIT----IQSVALGSEHSVAVTDGGEVLSWGG 214
Query: 315 NQYGQLGLG 323
G+LG G
Sbjct: 215 GGSGRLGHG 223
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 211 (79.3 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 65/244 (26%), Positives = 127/244 (52%)
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P+K + Q+ +A G H++ +T++ F +G N+ GQ G +++E G ++
Sbjct: 111 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG---LRKEQ-AGTQSPRHLQ 166
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGE 178
L G + G +H+ L+ SG V+ GWG + GQ GLG ++ P +V ++ +
Sbjct: 167 SLCGIPVAQISAGGNHSFVLSLSGVVF--GWGGNSAGQLGLGDTTDRFVPTVVNS-LKRK 223
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
+IV +S + A++ G VF +G+ +GQ+ + + PR++++ G S++ V
Sbjct: 224 KIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWG-SKVSQVTC 282
Query: 238 GGSACTMLNDEG--LVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
G + T+++ L+YS+G G+ LG G +V +S +P + ++N + ++
Sbjct: 283 GRNH-TLVSTASPKLIYSFGCGMQGQLGNGEQVKQS-----VPLPVDQPTEYNDEYTIQK 336
Query: 293 LIAG 296
L+AG
Sbjct: 337 LVAG 340
Score = 175 (66.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 60/223 (26%), Positives = 100/223 (44%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGE 174
C + LE +++ CG H++ LT G+++ G A GQ GL ++P ++
Sbjct: 109 CSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQS- 167
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV 233
+ G + ++S+ + +S G VFGWG + GQ+ + P V++ K +IV
Sbjct: 168 LCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR-KKIV 226
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
++ GG L G V+++G G GQ G + + + L+G SKV
Sbjct: 227 SISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWG-------SKVSQ 279
Query: 293 LIAGPC-TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G T + + +Y +G GQLG G Q PL V
Sbjct: 280 VTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 164 (62.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 54/203 (26%), Positives = 98/203 (48%)
Query: 149 CG-WGA----DGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
CG +GA DG L + ++ T C +E ++++++ +A+++ G +F WG
Sbjct: 86 CGEYGAVLLDDGGKVL--IMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWG 143
Query: 204 NSEYGQISESEMQIST--PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
+ GQ+ + Q T PR L G+ + +++GG+ +L+ G+V+ WG G
Sbjct: 144 ENALGQLGLRKEQAGTQSPRHLQSLCGIP-VAQISAGGNHSFVLSLSGVVFGWGGNSAGQ 202
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G R + PT++ S + K+ S+ G A+ G ++ +G +G
Sbjct: 203 LGLGDTTDRFV-PTVVNSL--------KRKKIVSISCGGEHTAALAKGGTVFTFGSGGFG 253
Query: 319 QLGLGTVEDQPFPLKVA-VGGQK 340
QLG + +D+ P VA + G K
Sbjct: 254 QLGHNSFKDEHHPRLVAELWGSK 276
Score = 137 (53.3 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 50/202 (24%), Positives = 90/202 (44%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G N+ QLG + + S IP + ++ G H+ V++
Sbjct: 138 QLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIP---------VAQISAGGNHSFVLSL 188
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F +G NS GQ G G D ++ + L+ +KI+ CG +HT L + G
Sbjct: 189 SGVVFGWGGNSAGQLGLG-----DTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGT 243
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL-AVSDKGDVFGWGN 204
V++ G G GQ G ++ P LV E+ G ++ +++ + L + + ++ +G
Sbjct: 244 VFTFGSGGFGQLGHNSFKDEHHPRLV-AELWGSKVSQVTCGRNHTLVSTASPKLIYSFGC 302
Query: 205 SEYGQISESE-MQISTPRVLSQ 225
GQ+ E ++ S P + Q
Sbjct: 303 GMQGQLGNGEQVKQSVPLPVDQ 324
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 44/176 (25%), Positives = 81/176 (46%)
Query: 106 QEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ 165
++ D GK H L+ I VCG+ + L + GKV + ++
Sbjct: 63 KDSDQDGK-LKH--LQLKKNTIRLIVCGEYGAVLLDDGGKVL--------------IMDK 105
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVL 223
T C +E ++++++ +A+++ G +F WG + GQ+ + Q T PR L
Sbjct: 106 STECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHL 165
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPS 276
G+ + +++GG+ +L+ G+V+ WG G LG G R + PT++ S
Sbjct: 166 QSLCGIP-VAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFV-PTVVNS 219
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 209 (78.6 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 58/220 (26%), Positives = 108/220 (49%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL-NNQETPCLVRGEIEGERI 180
L+ + I+ CG H+L L++ G++++ G DGQ G+G + + TP +V + G +
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LSGVPL 203
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGS 240
V++S+ +A+S G+V+ WG ++ GQ+ + ++ +A GG
Sbjct: 204 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 263
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG- 296
+L GLV+++G YG LG ++P L+ L G ++V + G
Sbjct: 264 HTALLTKSGLVFTFGDGKYGQLGHN-STQNELRPRLVTG-LVG-------NRVTQIACGR 314
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLKV 334
T +++ G ++ +G + GQLG G +Q P P+K+
Sbjct: 315 QHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKL 354
Score = 202 (76.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 60/218 (27%), Positives = 101/218 (46%)
Query: 47 GNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ 106
G P E S I + G H++ ++ F +G N GQ G G +
Sbjct: 127 GKPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRI- 185
Query: 107 EEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE 166
+ + +L G ++ G+ H++ L+ SG VYS G GQ GLGH N+E
Sbjct: 186 ---FASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKE 242
Query: 167 TPCLVRGEIEGERIVKLSSAVDCVLAVSDK-GDVFGWGNSEYGQISESEMQIST-PRVLS 224
+P + ++ +++ L+ C A+ K G VF +G+ +YGQ+ + Q PR+++
Sbjct: 243 SPSCIEA-LDDQKVEFLACG-GCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVT 300
Query: 225 QCKGVSRIVDVASGGS-ACTMLNDEGLVYSWGYGLLGQ 261
G +R+ +A G ++D G V+S+G G GQ
Sbjct: 301 GLVG-NRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQ 337
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/189 (31%), Positives = 92/189 (48%)
Query: 23 KNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIV 82
K +LF G N D QLG + E+V + +PL QI + G AH++
Sbjct: 165 KGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL------VQI---SAGEAHSMA 215
Query: 83 ITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTE 142
++ + +++G N GQ G G ++ C I L+ +K+ CG HT LT+
Sbjct: 216 LSMSGNVYSWGRNDCGQLGLGHTYNKESPS---C--IEALDDQKVEFLACGGCHTALLTK 270
Query: 143 SGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA-VSDKGDVFG 201
SG V++ G G GQ G N+ P LV G + G R+ +++ LA VSD G VF
Sbjct: 271 SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLV-GNRVTQIACGRQHTLAYVSDTGKVFS 329
Query: 202 WGNSEYGQI 210
+G+ + GQ+
Sbjct: 330 FGSGKEGQL 338
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G++H L L+ GK + + + H Q C+ ++ + I++++ LA
Sbjct: 116 GEEHMLVLSSDGKPFEYKYSIE------HARFQ---CI----LQEKNIIQITCGDYHSLA 162
Query: 193 VSDKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+S G++F WG + GQ+ + STP ++ GV +V +++G + L+ G
Sbjct: 163 LSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVP-LVQISAGEAHSMALSMSGN 221
Query: 251 VYSWGYGLLGQ 261
VYSWG GQ
Sbjct: 222 VYSWGRNDCGQ 232
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 209 (78.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 61/234 (26%), Positives = 121/234 (51%)
Query: 52 LVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
L+M + P+K + Q+ +A G H++ ++++ F +G N+ GQ G ++
Sbjct: 98 LIMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLR-KEQAGT 156
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETP 168
Q ++ ++ +I G +H+ L+ SG V+ GWG++ GQ GLG ++ P
Sbjct: 157 QSPQHLQSLCEIPVAQIS---AGGNHSFVLSLSGVVF--GWGSNSAGQLGLGDTKDRFVP 211
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCK 227
+V+ + G++ V +S + +S G VF +G+ +GQ+ + ++ PR++++
Sbjct: 212 TIVKS-LCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW 270
Query: 228 GVSRIVDVASGGSACTMLNDEG-LVYSWGYGL---LGQGPKVSRSMK-PTLIPS 276
G S++ V G + + L+YS+G G+ LG G +V +S+ P L+P+
Sbjct: 271 G-SKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPT 323
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 59/226 (26%), Positives = 109/226 (48%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
L+ E+I VCG+ + L + GKV + +Q T C +E +++
Sbjct: 73 LQNERIRSIVCGEAGAVLLADDGKVL--------------IMDQSTVCRPLKSLENRQVI 118
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--PRVL-SQCKGVSRIVDVASG 238
+++ +A+S+ G +F WG + +GQ+ + Q T P+ L S C+ + +++G
Sbjct: 119 QIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCE--IPVAQISAG 176
Query: 239 GSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G+ +L+ G+V+ WG G LG G R + PT++ S L G+ K S+
Sbjct: 177 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV-PTIVKS-LCGK-------KTVSISC 227
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA-VGGQK 340
G ++ G ++ +G +GQLG +++D+ P +A + G K
Sbjct: 228 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSK 273
Score = 166 (63.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 59/224 (26%), Positives = 98/224 (43%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGE 174
C + LE +++ CG H++ L+ G+++ G GQ GL ++P ++
Sbjct: 106 CRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSL 165
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV 233
E + ++S+ + +S G VFGWG++ GQ+ + + P ++ G + V
Sbjct: 166 CEIP-VAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCG-KKTV 223
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPK-VSRSMKPTLIPSTLFGQHQFNPKSKVE 291
++ GG L+ G V+++G G GQ G + P LI + L+G SKV
Sbjct: 224 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLI-AELWG-------SKVS 275
Query: 292 SLIAGPCTFGAITNFGHL-YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G L Y +G GQLG G Q PL V
Sbjct: 276 QVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPV 319
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 49/197 (24%), Positives = 90/197 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G N+ QLG + + + S IP + ++ G H+ V++
Sbjct: 135 QLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIP---------VAQISAGGNHSFVLSL 185
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F +G+NS GQ G G D + ++ + L G+K + CG +HT L++ G
Sbjct: 186 SGVVFGWGSNSAGQLGLG-----DTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGT 240
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD-VFGWGN 204
V++ G G GQ G L ++ P L+ E+ G ++ +++ L + ++ +G
Sbjct: 241 VFTFGSGGFGQLGHNSLKDEHHPRLI-AELWGSKVSQVTCGRHHTLVFEESSKLIYSFGC 299
Query: 205 SEYGQISESE-MQISTP 220
GQ+ E ++ S P
Sbjct: 300 GMQGQLGNGEQVKQSVP 316
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 204 (76.9 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 80/277 (28%), Positives = 126/277 (45%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G H++ +T +TFG N+ GQ G G ++E + L+G +I+ A G
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR-----IQPVRSLQGVRIIQAAAGAA 205
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQE--TPCLVRGEIEGERIVK--LSSAVDCVL 191
T+ +++ GKVY+CG + G+ G + TP LV ++ +V+ + + VL
Sbjct: 206 RTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTS-LKNIFVVQAAIGNYFTAVL 264
Query: 192 AVSDKGDVFGWGNSEYGQIS-ESEMQISTPR-VLSQCKGVSRIVDVASGGSACTML---- 245
+ K F WGN G++ ++E PR +L + V +V +A+G C +L
Sbjct: 265 SREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVP-VVQIAAG--YCYLLALAC 319
Query: 246 NDEGL-VYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQF-NPKSKVESLIAGPCTF 300
G+ VYS G GL LG G + P +I Q Q N + +V + AG
Sbjct: 320 QPNGMSVYSVGCGLGGKLGHGSRTDEKY-PRVIE-----QFQILNLQPRV--VAAGAWHA 371
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
+ G + WG +YG LG G E + P KV G
Sbjct: 372 AVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVEG 407
Score = 193 (73.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 56/208 (26%), Positives = 100/208 (48%)
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
AV G H++ +T G+VY+ G+ GQ G GH ++ VR ++G RI++ ++
Sbjct: 148 AVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRS-LQGVRIIQAAAGAAR 206
Query: 190 VLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ +SD G V+ G +G+ + ++TP++++ K + +V A G +L+
Sbjct: 207 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIF-VVQAAIGNYFTAVLS 265
Query: 247 DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAIT-- 304
EG VY++ +G G ++ + P L G + P V + AG C A+
Sbjct: 266 REGKVYTFSWG--NDGRLGHQTEAADVEPRPLLGPLENVP---VVQIAAGYCYLLALACQ 320
Query: 305 -NFGHLYMWGKNQYGQLGLGTVEDQPFP 331
N +Y G G+LG G+ D+ +P
Sbjct: 321 PNGMSVYSVGCGLGGKLGHGSRTDEKYP 348
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 69/273 (25%), Positives = 118/273 (43%)
Query: 62 PVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
PV+ +I A G A T++I+D+ + G SFG+ G + +
Sbjct: 188 PVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQL---VT 244
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGE 178
L+ ++ A G T L+ GKVY+ WG DG+ LGH P + G +E
Sbjct: 245 SLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR--LGHQTEAADVEPRPLLGPLENV 302
Query: 179 RIVKLSSAVDCVLAVS--DKG-DVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVS---R 231
+V++++ +LA++ G V+ G G++ S PRV+ Q + ++ R
Sbjct: 303 PVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPR 362
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+V A+G ++ +G V +WG YG LG G + S +P + G
Sbjct: 363 VV--AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-----VPKVVEGLSHV---- 411
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
K + G T +++ G +Y +G + LG
Sbjct: 412 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 444
Score = 161 (61.7 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 93/359 (25%), Positives = 150/359 (41%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNS--DSQLGYHDPRKKGNPLELVMSFVRI 59
++I A G T++ S D K++ CG S +++ G + P +LV S I
Sbjct: 195 VRIIQAAAGAARTMLI--SDDG--KVYACGKESFGEAEYGGQGTKPVTTP-QLVTSLKNI 249
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ A G T V++ +TF + G+ G + D + + +
Sbjct: 250 ---------FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQ-TEAADVEPRPL---L 296
Query: 120 ADLEGEKIMDAVCGQDHTLFLT--ESG-KVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
LE ++ G + L L +G VYS G G G+ G G +++ P + IE
Sbjct: 297 GPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRV----IE 352
Query: 177 GERIVKLSSAVDCVLA-----VSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVS 230
+I+ L V A V G V WG YG + + S P+V+ V
Sbjct: 353 QFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV- 411
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYG---LLG-------QGPKVSRSMKPTLIPSTLFG 280
+ V VA+G +++D+G VYS+G G LG QG + + + PT++ S
Sbjct: 412 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQV 471
Query: 281 QHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG--LG-TVEDQPFPLKVAV 336
+ S S+ TF A+T G L+ +G GQLG LG +++ P KV +
Sbjct: 472 NERMVQISLTNSIYWNAHTF-ALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDI 529
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 68/254 (26%), Positives = 130/254 (51%)
Query: 52 LVMSFVRIPLPVKH-PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
L+M + P+K +T++ +A G H++ ++++ F +G N+ GQ G +++E
Sbjct: 101 LLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLG---LRKEQA 157
Query: 111 QGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETP 168
+ H + L G + G +H+ L+ SG V+ GWG++ GQ GLG ++ P
Sbjct: 158 LIQSPQH-LQSLCGIPVAQISAGGNHSFVLSLSGVVF--GWGSNSAGQLGLGDTTDRFVP 214
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCK 227
+V+ + G++ V +S + +S G VF +G+ +GQ+ + ++ PR++++
Sbjct: 215 TIVKS-LSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW 273
Query: 228 GVSRIVDVASGGSACTMLND-EGLVYSWGYGL---LGQGPKVSRSMK-PTLIPSTLFGQH 282
G S++ V G +L +YS+G G+ LG G +V +S+ P L+P+
Sbjct: 274 G-SKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDC---- 328
Query: 283 QFNPKSKVESLIAG 296
N + +E +IAG
Sbjct: 329 --NCEFTMEKIIAG 340
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 61/226 (26%), Positives = 103/226 (45%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ-ETPCLVRGE 174
C + L+ K++ CG H++ L+ G+++ G A GQ GL ++P ++
Sbjct: 109 CRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQS- 167
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV 233
+ G + ++S+ + +S G VFGWG++ GQ+ + P ++ G + V
Sbjct: 168 LCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSG-KKTV 226
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPK-VSRSMKPTLIPSTLFGQHQFNPKSKVE 291
++ GG L+ G V+++G G GQ G + P L+ + L+G SKV
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLV-AELWG-------SKVS 278
Query: 292 SLIAG---PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G A+TN +Y +G GQLG G Q PL V
Sbjct: 279 QVTCGRHHTLVLVALTN--RIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 67/256 (26%), Positives = 120/256 (46%)
Query: 100 CGRGIVQEEDYQGKWFCHNIAD--LEGEKIMDAVCGQDHTLFLTE--SGKVYSCGWGADG 155
C + VQ+ GK F I D + ++ D C QD L + K+ S G DG
Sbjct: 32 CPKSAVQDMS-AGKTFVGFIRDGKVSVLRLRDEDCNQDGKLKQLDLKREKIRSIVCGEDG 90
Query: 156 QTGLGH-----LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
L L ++ T C ++ ++++++ +A+S+ G +F WG + +GQ+
Sbjct: 91 AVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQL 150
Query: 211 SESEMQ--ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKV 265
+ Q I +P+ L G+ + +++GG+ +L+ G+V+ WG G LG G
Sbjct: 151 GLRKEQALIQSPQHLQSLCGIP-VAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTT 209
Query: 266 SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
R + PT++ S L G+ K S+ G ++ G ++ +G +GQLG ++
Sbjct: 210 DRFV-PTIVKS-LSGK-------KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL 260
Query: 326 EDQPFPLKVA-VGGQK 340
+D+ P VA + G K
Sbjct: 261 KDEHHPRLVAELWGSK 276
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 51/197 (25%), Positives = 90/197 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+LF G N+ QLG + + + S IP + ++ G H+ V++
Sbjct: 138 QLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIP---------VAQISAGGNHSFVLSL 188
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+ F +G+NS GQ G G D ++ + L G+K + CG +HT L++ G
Sbjct: 189 SGVVFGWGSNSAGQLGLG-----DTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGT 243
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA-VSDKGDVFGWGN 204
V++ G G GQ G L ++ P LV E+ G ++ +++ L V+ ++ +G
Sbjct: 244 VFTFGSGGFGQLGHNSLKDEHHPRLV-AELWGSKVSQVTCGRHHTLVLVALTNRIYSFGC 302
Query: 205 SEYGQISESE-MQISTP 220
GQ+ E ++ S P
Sbjct: 303 GMQGQLGNGEQVKQSVP 319
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 60/222 (27%), Positives = 114/222 (51%)
Query: 122 LEGEKIMDAVCGQDHTLFLT--ESGKVYSCGWGADGQTGLGHL-NNQETPCLVRGEIEGE 178
L+ + I+ CG H+L L+ + G++++ G GQ G+G L + TP LV + G
Sbjct: 132 LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVE-HLSGV 190
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG 238
+V++S+ +A+S G+++ WG ++ GQ+ L + ++ +A G
Sbjct: 191 PLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACG 250
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ-GPKVSRS-MKPTLIPSTLFGQHQFNPKSKVESLIAG 296
GS +L +GLV+++G G GQ G +++ ++P L+ + L G ++V + G
Sbjct: 251 GSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLV-TELAG-------NRVTQVACG 302
Query: 297 PC--TFGAITNFGHLYMWGKNQYGQLGLGTVEDQ--PFPLKV 334
T +++ G ++ +G + GQLG G +Q P P+K+
Sbjct: 303 SRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 344
Score = 204 (76.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 66/212 (31%), Positives = 101/212 (47%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP- 62
I I CG + +A SK + +LF G N QLG G F IP P
Sbjct: 137 IIQITCG-DYHSLAL-SKGQGGELFAWGQNLHGQLGV------GR------LFTSIPTPQ 182
Query: 63 -VKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
V+H S + ++ G+AH++ ++ + +++G N GQ G G ED+ I
Sbjct: 183 LVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSL-----IE 237
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
L+ +K+ CG HT LT+ G V++ G G GQ G N+ P LV E+ G R+
Sbjct: 238 ALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVT-ELAGNRV 296
Query: 181 VKLS--SAVDCVLAVSDKGDVFGWGNSEYGQI 210
+++ S + VSD G VF +G+ + GQ+
Sbjct: 297 TQVACGSRWHTLAYVSDLGKVFSFGSGKEGQL 328
Score = 199 (75.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 56/197 (28%), Positives = 98/197 (49%)
Query: 70 IKHLATGRAHTIVITDNEGA--FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKI 127
I + G H++ ++ +G F +G N GQ G G + + H L G +
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEH----LSGVPL 192
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
+ G+ H++ L+ SG +YS G GQ GLGH N ++ P L+ ++ +++ L+
Sbjct: 193 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGG 251
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGSACTM-- 244
++ G VF +G +YGQ+ + Q PR++++ G +R+ VA G T+
Sbjct: 252 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQVACGSRWHTLAY 310
Query: 245 LNDEGLVYSWGYGLLGQ 261
++D G V+S+G G GQ
Sbjct: 311 VSDLGKVFSFGSGKEGQ 327
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 58/223 (26%), Positives = 103/223 (46%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
KI G +H L L+ GK + + + H + + C+ ++ + I++++
Sbjct: 95 KIHSVDQGAEHMLILSSDGKPFEYNYSIE------HASRFQ--CI----LQEKSIIQITC 142
Query: 186 AVDCVLAVS--DKGDVFGWGNSEYGQISESEM--QISTPRVLSQCKGVSRIVDVASGGSA 241
LA+S G++F WG + +GQ+ + I TP+++ GV +V +++G +
Sbjct: 143 GDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVP-LVQISAGKAH 201
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
L+ G +YSWG G LG G P+LI + L Q KVE L G
Sbjct: 202 SMALSMSGNIYSWGRNDLGQLGLGHTNGEDF-PSLIEA-LDNQ-------KVEFLACGGS 252
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP-LKVAVGGQK 340
+T G ++ +G +YGQLG + +++ P L + G +
Sbjct: 253 HTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNR 295
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++ LA G +HT ++T + FTFG +GQ G Q E + + + +L G ++
Sbjct: 243 KVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNE-LRPRL----VTELAGNRVT 297
Query: 129 DAVCGQD-HTL-FLTESGKVYSCGWGADGQTGLGHLNNQETP 168
CG HTL ++++ GKV+S G G +GQ G G +NQ P
Sbjct: 298 QVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 339
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 200 (75.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 74/275 (26%), Positives = 119/275 (43%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ +A G H++ + + +G+NS GQ + F +E K+
Sbjct: 141 VQQVAAGGLHSMALAGGT-VWAWGSNSAGQLALNPISSATR----FAPR--QVETAKLPI 193
Query: 130 A----VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
A V G H++ T S + Y+ G A GQ G G + P V+ I K+S+
Sbjct: 194 APTAIVAGGSHSIAYT-STEAYAWGNNASGQLGNGTTLSNHMPQKVQLP-SSITIRKISA 251
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+ G ++ WG++ YGQ+ + STP L+ GV+ +DV +G S
Sbjct: 252 GGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVA 311
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ VY+WG+ GLL G + P + F +V L+ T
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGT-TGDQLSPAQVRDA--SNVPFTDVERVV-LLGSFFTIV 367
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G ++ WG N YGQLG GT ++ P++VA+
Sbjct: 368 KKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVAL 402
Score = 178 (67.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 83/317 (26%), Positives = 135/317 (42%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT--DN-E 87
G N QLG P L + F +T ATG +HT+ I DN
Sbjct: 56 GNNESGQLGDGTTTSAATPKRLRLGF----------ATYSSGFATGASHTLAIARFDNVS 105
Query: 88 GAFTFGNNSFGQCGR--GIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
G +G+NS GQ GR V K I G + G H++ L G
Sbjct: 106 GVRAWGSNSAGQIGRDPATVPTSSTPVK-----IGGFGGA-VQQVAAGGLHSMALA-GGT 158
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS---DKGDVFGW 202
V++ G + GQ L +++ T R ++E ++ +A+ + S + + W
Sbjct: 159 VWAWGSNSAGQLALNPISSA-TRFAPR-QVETAKLPIAPTAIVAGGSHSIAYTSTEAYAW 216
Query: 203 GNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
GN+ GQ+ + + P+ + ++ I +++GGS L+ G +++WG YG
Sbjct: 217 GNNASGQLGNGTTLSNHMPQKVQLPSSIT-IRKISAGGSHNLALDSTGAIWAWGSNAYGQ 275
Query: 259 LGQGPKVSRSMKPTL-IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G ++S L +P+ + G F ++ + AGP A+ + +Y WG N
Sbjct: 276 LGNGTTTNQSTPVQLTLPAGVTG---F-----ID-VFAGPSHSVAVASNFTVYTWGFNTL 326
Query: 318 GQLGLGTVEDQPFPLKV 334
G L +GT DQ P +V
Sbjct: 327 GLLSVGTTGDQLSPAQV 343
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 67/272 (24%), Positives = 114/272 (41%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
+H+ V + +GNN GQ G G K A G HT
Sbjct: 41 SHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATP-KRLRLGFATYSS----GFATGASHT 95
Query: 138 LFLTESGKVYSC-GWGAD--GQTGL--GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
L + V WG++ GQ G + TP + G G + ++++ +A
Sbjct: 96 LAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGF--GGAVQQVAAGGLHSMA 153
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIST---PRVLSQCK-GVSRIVDVASGGSACTMLNDE 248
++ G V+ WG++ GQ++ + + +T PR + K ++ VA G + + E
Sbjct: 154 LAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTE 212
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTL-IPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
Y+WG G LG G +S M + +PS++ + + AG A+
Sbjct: 213 A--YAWGNNASGQLGNGTTLSNHMPQKVQLPSSI----------TIRKISAGGSHNLALD 260
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ G ++ WG N YGQLG GT +Q P+++ +
Sbjct: 261 STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTL 292
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/161 (25%), Positives = 79/161 (49%)
Query: 59 IPLPVKHPST-QIKHLATGRAHTIVITDNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+P V+ PS+ I+ ++ G +H + + D+ GA + +G+N++GQ G G + +
Sbjct: 234 MPQKVQLPSSITIRKISAGGSHNLAL-DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTL 292
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-- 174
A + G +D G H++ + + VY+ G+ G +G +Q +P VR
Sbjct: 293 P--AGVTG--FIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASN 348
Query: 175 ---IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
+ ER+V L S ++ + G ++ WG + YGQ+ +
Sbjct: 349 VPFTDVERVVLLGSFFT-IVKKNGSGGMWAWGYNGYGQLGD 388
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 200 (75.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 74/275 (26%), Positives = 119/275 (43%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ +A G H++ + + +G+NS GQ + F +E K+
Sbjct: 141 VQQVAAGGLHSMALAGGT-VWAWGSNSAGQLALNPISSATR----FAPR--QVETAKLPI 193
Query: 130 A----VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
A V G H++ T S + Y+ G A GQ G G + P V+ I K+S+
Sbjct: 194 APTAIVAGGSHSIAYT-STEAYAWGNNASGQLGNGTTLSNHMPQKVQLP-SSITIRKISA 251
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTM 244
LA+ G ++ WG++ YGQ+ + STP L+ GV+ +DV +G S
Sbjct: 252 GGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVA 311
Query: 245 LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
+ VY+WG+ GLL G + P + F +V L+ T
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGT-TGDQLSPAQVRDA--SNVPFTDVERVV-LLGSFFTIV 367
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G ++ WG N YGQLG GT ++ P++VA+
Sbjct: 368 KKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVAL 402
Score = 178 (67.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 83/317 (26%), Positives = 135/317 (42%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT--DN-E 87
G N QLG P L + F +T ATG +HT+ I DN
Sbjct: 56 GNNESGQLGDGTTTSAATPKRLRLGF----------ATYSSGFATGASHTLAIARFDNVS 105
Query: 88 GAFTFGNNSFGQCGR--GIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
G +G+NS GQ GR V K I G + G H++ L G
Sbjct: 106 GVRAWGSNSAGQIGRDPATVPTSSTPVK-----IGGFGGA-VQQVAAGGLHSMALA-GGT 158
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS---DKGDVFGW 202
V++ G + GQ L +++ T R ++E ++ +A+ + S + + W
Sbjct: 159 VWAWGSNSAGQLALNPISSA-TRFAPR-QVETAKLPIAPTAIVAGGSHSIAYTSTEAYAW 216
Query: 203 GNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
GN+ GQ+ + + P+ + ++ I +++GGS L+ G +++WG YG
Sbjct: 217 GNNASGQLGNGTTLSNHMPQKVQLPSSIT-IRKISAGGSHNLALDSTGAIWAWGSNAYGQ 275
Query: 259 LGQGPKVSRSMKPTL-IPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG G ++S L +P+ + G F ++ + AGP A+ + +Y WG N
Sbjct: 276 LGNGTTTNQSTPVQLTLPAGVTG---F-----ID-VFAGPSHSVAVASNFTVYTWGFNTL 326
Query: 318 GQLGLGTVEDQPFPLKV 334
G L +GT DQ P +V
Sbjct: 327 GLLSVGTTGDQLSPAQV 343
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 67/272 (24%), Positives = 114/272 (41%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
+H+ V + +GNN GQ G G K A G HT
Sbjct: 41 SHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATP-KRLRLGFATYSS----GFATGASHT 95
Query: 138 LFLTESGKVYSC-GWGAD--GQTGL--GHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
L + V WG++ GQ G + TP + G G + ++++ +A
Sbjct: 96 LAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGF--GGAVQQVAAGGLHSMA 153
Query: 193 VSDKGDVFGWGNSEYGQISESEMQIST---PRVLSQCK-GVSRIVDVASGGSACTMLNDE 248
++ G V+ WG++ GQ++ + + +T PR + K ++ VA G + + E
Sbjct: 154 LAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTE 212
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTL-IPSTLFGQHQFNPKSKVESLIAGPCTFGAIT 304
Y+WG G LG G +S M + +PS++ + + AG A+
Sbjct: 213 A--YAWGNNASGQLGNGTTLSNHMPQKVQLPSSI----------TIRKISAGGSHNLALD 260
Query: 305 NFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
+ G ++ WG N YGQLG GT +Q P+++ +
Sbjct: 261 STGAIWAWGSNAYGQLGNGTTTNQSTPVQLTL 292
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/161 (25%), Positives = 79/161 (49%)
Query: 59 IPLPVKHPST-QIKHLATGRAHTIVITDNEGA-FTFGNNSFGQCGRGIVQEEDYQGKWFC 116
+P V+ PS+ I+ ++ G +H + + D+ GA + +G+N++GQ G G + +
Sbjct: 234 MPQKVQLPSSITIRKISAGGSHNLAL-DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTL 292
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-- 174
A + G +D G H++ + + VY+ G+ G +G +Q +P VR
Sbjct: 293 P--AGVTG--FIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASN 348
Query: 175 ---IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE 212
+ ER+V L S ++ + G ++ WG + YGQ+ +
Sbjct: 349 VPFTDVERVVLLGSFFT-IVKKNGSGGMWAWGYNGYGQLGD 388
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 201 (75.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 81/306 (26%), Positives = 128/306 (41%)
Query: 31 GLNSDSQLGYHDPRKKGN-PLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGA 89
G N Q G ++ K P +L P +++ ++ GR HT + +
Sbjct: 26 GYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGA---NSRWLDISCGREHTAAVASDGSL 82
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +G N +GQ G G + K + L+ E + CG T + E + +
Sbjct: 83 FAWGANEYGQLGDGTEVGRKHPKK-----VKQLQSEFVKFVSCGAFCTAAIAEPRE--ND 135
Query: 150 GWGADGQTGL-GHLNNQETPCLVRGEIEGERIVK-LSSAVDCVLAVSDKGDVFGWGNSEY 207
G + + + G P L G ++ +S V+A+S++G + WG +E
Sbjct: 136 GTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQ 195
Query: 208 GQISESEM--QISTPRV-------LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL 258
GQ+ + PRV L + + +I+ ++ G L+D G VY+WG G
Sbjct: 196 GQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGS 255
Query: 259 LGQGPKVS-RSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
+GQ VS +S LIP + G + K E G T A++ G LY WG Q
Sbjct: 256 MGQLGHVSLQSGDKELIPRRVVGLDGVSMK---EVACGGVHTC-ALSLEGALYAWGGGQA 311
Query: 318 GQLGLG 323
GQLGLG
Sbjct: 312 GQLGLG 317
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 62/256 (24%), Positives = 113/256 (44%)
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQE-----EDYQGKWF-CHNIADLEGEKIMDAV 131
A ++ I + +G N GQ GR ++ + + F C A+ + +D
Sbjct: 11 APSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGAN---SRWLDIS 67
Query: 132 CGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG++HT + G +++ WGA+ GQ G G ++ P V+ +++ E + +S C
Sbjct: 68 CGREHTAAVASDGSLFA--WGANEYGQLGDGTEVGRKHPKKVK-QLQSEFVKFVSCGAFC 124
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC-KGVSRIVDVASGGSACTMLNDE 248
A+++ + G ++ + + PR+ S + I V+ G + L++E
Sbjct: 125 TAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEE 184
Query: 249 GLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
GL+ +WGY G LG+G P +I + + K+ L G A+++
Sbjct: 185 GLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSD 244
Query: 306 FGHLYMWGKNQYGQLG 321
G +Y WG GQLG
Sbjct: 245 AGEVYTWGLGSMGQLG 260
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 64/216 (29%), Positives = 101/216 (46%)
Query: 67 STQIKHLATGRAHTIVITDNEGAF-TFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+T I+ ++ G AH + +++ EG +G N GQ GRG+ E Q + A E
Sbjct: 165 TTAIRQVSCGTAHVVALSE-EGLLQAWGYNEQGQLGRGVTCE-GLQAPRVINAYAKFLDE 222
Query: 126 -----KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-----TPCLVRGEI 175
KIM CG+ HT L+++G+VY+ G G+ GQ LGH++ Q P V G +
Sbjct: 223 APELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQ--LGHVSLQSGDKELIPRRVVG-L 279
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS---ESEMQISTPRVLSQC-KGVSR 231
+G + +++ A+S +G ++ WG + GQ+ +S S + V
Sbjct: 280 DGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPV 339
Query: 232 IV---DV---ASGGSACTMLNDEGLVYSWGYGLLGQ 261
+V DV A G S + EG + WGY GQ
Sbjct: 340 LVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQ 375
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 65/254 (25%), Positives = 105/254 (41%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ++CG VVA S++ L+ +G N QLG + ++ ++ + L
Sbjct: 168 IRQVSCGTAH-VVAL-SEEGLLQAWG--YNEQGQLGRGVTCEGLQAPRVINAYAKF-LDE 222
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
+I L+ G HT ++D +T+G S GQ G +Q D + + L+
Sbjct: 223 APELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKE--LIPRRVVGLD 280
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G + + CG HT L+ G +Y+ G G GQ GLG + E+ + L
Sbjct: 281 GVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVL 340
Query: 184 SSAVD-----C----VLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIV 233
D C L +G + GWG + YGQ + + + P + C G R
Sbjct: 341 VIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVR-- 398
Query: 234 DVASGGSACTMLND 247
+A+GG +L D
Sbjct: 399 KLAAGGGHSAVLTD 412
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 87/352 (24%), Positives = 145/352 (41%)
Query: 1 MIKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
++ + IACG T+ + +F G S +LG+ + +P LV S
Sbjct: 280 VLDVHQIACGVRHAAFVTRQGE----IFTWGEESGGRLGHGIGKDVFHP-RLVESLTA-- 332
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGN--NSFGQCGRGIVQEEDYQGKWFCHN 118
++ + +A G HT +T +T+G+ ++ G G G D W
Sbjct: 333 ------TSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHG----SDIS-HWIPKR 381
Query: 119 IA-DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
IA LEG + CG HT +T G++++ G G G G G + P V + G
Sbjct: 382 IAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVES-LSG 440
Query: 178 ERIVKLS-------SAVDCVLAVSDK-----GDVFGWGNSEYGQISESEMQISTPRVLSQ 225
R + +S + V+ ++ S+ G +F WG+ + ++ + PR+
Sbjct: 441 LRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKD---PRLKPT 497
Query: 226 CKGVSRIVD-----VASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMK-PTLIPSTLF 279
C V ++D +A G S L G V++ G + GQ + K P L+ L
Sbjct: 498 C--VPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLA 555
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ VE + G A+T+ +Y WGK G+LG G +ED+ P
Sbjct: 556 SEF-------VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVP 600
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/148 (29%), Positives = 67/148 (45%)
Query: 193 VSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
V+ +G++F WG G++ + PR++ S + VA G + G +
Sbjct: 296 VTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGEL 355
Query: 252 YSWG-----YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
Y+WG GLLG G +S + P I +L G H V S+ GP IT++
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWI-PKRIAGSLEGLH-------VASVSCGPWHTALITSY 407
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G L+ +G +G LG G E +P +V
Sbjct: 408 GRLFTFGDGTFGVLGHGDKETVQYPREV 435
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 7 IACGYGFT-----VVATKSKDKNL---KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVR 58
++CG T ++ T+S ++ KLF G ++LG+ D + P
Sbjct: 446 VSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-------TC 498
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P + + +A G + T+ +T + FT G+ +GQ G +Q + GK C
Sbjct: 499 VPALIDY---NFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGN--LQTD---GKLPCLV 550
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
L E + + CG H LT +VY+ G GA+G+ G G L +++ P +V E +
Sbjct: 551 EDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIV--EALKD 608
Query: 179 RIVK 182
R VK
Sbjct: 609 RHVK 612
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 201 (75.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 76/277 (27%), Positives = 127/277 (45%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +ACG FT T D+ + + FG G S+ LG+ GN ++ + +
Sbjct: 397 VTIKHVACGDLFTACLT---DRGIIMTFGSG--SNGCLGH------GNLTDISQPTI-VE 444
Query: 61 LPVKHPSTQIKHLATGRAHTIVI-TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HN 118
+ + Q+ A G +H + + TD E F +G G+ G G + + C
Sbjct: 445 ALLGYEMVQV---ACGASHVLALSTDGE-LFAWGRGDGGRLGLGTRESHN------CPQQ 494
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
+ G++ VCG D ++ LT G+V +CG + GL HL+ E P + E
Sbjct: 495 VPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEAL 554
Query: 179 RIVKLSSA-VD-----CV-------LAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
L SA +D CV A++ GD + +G++++GQ+ S ++S P +
Sbjct: 555 SFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQ 614
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ ++V VA G + + EG VYSWG G G+
Sbjct: 615 GLEGI-KMVMVACGDAFTVAVGAEGEVYSWGKGTRGR 650
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 67/286 (23%), Positives = 115/286 (40%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSR 389
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G+L + P +V + G
Sbjct: 390 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALL-G 448
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVA 236
+V+++ VLA+S G++F WG + G++ + + P+ + G V
Sbjct: 449 YEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPG-QEAQRVV 507
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH-QFNPKSKV----E 291
G + +L G V + G + S+ +P + F P E
Sbjct: 508 CGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQE 567
Query: 292 SLIA---GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
L+ G AIT G Y +G NQ+GQLG + P +V
Sbjct: 568 PLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRV 613
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 70/283 (24%), Positives = 113/283 (39%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLT--DISQPTI---VEALLGYEMVQ 453
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG----HLNNQETPCLVRGEIEGERIVKLSS 185
CG H L L+ G++++ G G G+ GLG H Q+ P + G+ E +R+V
Sbjct: 454 VACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVP-VAPGQ-EAQRVV---C 508
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG------ 238
+D + ++ G V G++ + ++ + + P Q + + S
Sbjct: 509 GIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEP 568
Query: 239 ------GSA-CTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
G+A + G Y++G GQ SR + P + G K+
Sbjct: 569 LLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGI----KMV 622
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G A+ G +Y WGK G+LG ED P V
Sbjct: 623 MVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRD-EDAGLPRPV 664
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 54/228 (23%), Positives = 91/228 (39%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG V S D +LF G +LG P ++ P
Sbjct: 450 EMVQVACGASH--VLALSTDG--ELFAWGRGDGGRLGLGTRESHNCPQQV---------P 496
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG--IVQEED--YQG-----K 113
V P + + + G ++++T G+N F + G + EE YQ
Sbjct: 497 VA-PGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALS 555
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ A L+ E ++ G H+ +T SG Y+ G GQ G PC V+G
Sbjct: 556 FTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG 615
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
+EG ++V ++ +AV +G+V+ WG G++ + PR
Sbjct: 616 -LEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPR 662
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 198 (74.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 73/294 (24%), Positives = 124/294 (42%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N K++ CG++ L + G+ ++F I P P+ Q+ ++ + H+ +
Sbjct: 128 NSKVYSCGVSLSGVLAH------GSETTQCVAFTPIEFPF--PA-QVAQVSATQNHSAFV 178
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
+ T G+NS CG ++ K + L+G G T+FL+
Sbjct: 179 LQSGQVLTCGDNSSHCCGHLDTSRPIFRPKL----VEALKGTPCKQVAAGLHFTVFLSRE 234
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G Y+CG GQ G G ++ P +V +V++++ VLAV+ G V+ +G
Sbjct: 235 GHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFG 294
Query: 204 NSEYGQISESEMQIST-PRVLS--QCKGVSRIVDVASGGSACTMLNDEGLVYSWG--Y-G 257
+ + E Q PRV+ + KG+ I+ V++G L+ G VY+WG Y G
Sbjct: 295 SGSNFCLGHGEQQDELQPRVIQAFKRKGI-HILRVSAGDEHAVALDSNGRVYTWGKGYCG 353
Query: 258 LLGQGPKVSRSMKPTLIP-STLFGQHQFNPKSKVESLIAGPCTFG-AITNFGHL 309
LG G + + L+ + K K L+ G +G FG L
Sbjct: 354 ALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSL 407
Score = 186 (70.5 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 69/271 (25%), Positives = 125/271 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE---GEKIMD 129
+ATG+ HT++I +N ++ G + G G E Q C +E ++
Sbjct: 116 IATGKYHTLLI-NNSKVYSCGVSLSGVLAHG---SETTQ----CVAFTPIEFPFPAQVAQ 167
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGL-GHLNNQET---PCLVRGEIEGERIVKLSS 185
Q+H+ F+ +SG+V +CG D + GHL+ P LV ++G ++++
Sbjct: 168 VSATQNHSAFVLQSGQVLTCG---DNSSHCCGHLDTSRPIFRPKLVEA-LKGTPCKQVAA 223
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTPRVLSQCKGVSRIVDVASGGSACTM 244
+ + +S +G + G++ +GQ+ + + P+V+ K + +V +A+G S
Sbjct: 224 GLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLA 283
Query: 245 LNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS-KVESLIAGPCTF 300
+ +G VYS+G G LG G + ++P +I + F K + + AG
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDE-LQPRVIQA-------FKRKGIHILRVSAGDEHA 335
Query: 301 GAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
A+ + G +Y WGK G LG G D+ P
Sbjct: 336 VALDSNGRVYTWGKGYCGALGHGDENDKITP 366
Score = 171 (65.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 71/261 (27%), Positives = 113/261 (43%)
Query: 68 TQIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDY-QGKWFCHNIADLEGE 125
T K +A G H V EG A+T G+N+ GQ G G + + F I
Sbjct: 216 TPCKQVAAG-LHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP---- 270
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLS 184
++ G + L +T+ G VYS G G++ G G ++ P +++ + +G I+++S
Sbjct: 271 -VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVS 329
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ + +A+ G V+ WG G + E TP+VL V V +
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLA-VQVCARKRKTF 388
Query: 244 MLNDEGLVYS--W-GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
+L + GL+Y W G+G LG P S K L P L P +V + G
Sbjct: 389 VLVEGGLLYGFGWMGFGSLGF-PDRGVSDK-VLRPRVL---ECLKPH-RVSQVSTGLYHT 442
Query: 301 GAITNFGHLYMWGKNQYGQLG 321
+T G ++ +G N+ QLG
Sbjct: 443 IVVTQRGRIFGFGDNERAQLG 463
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 52/234 (22%), Positives = 99/234 (42%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
+ IA G + + T+ D ++ FG G S+ LG+ + + + P ++ +F
Sbjct: 271 VVQIAAGPSYVLAVTQ--DGSVYSFGSG--SNFCLGHGEQQDELQP-RVIQAF------- 318
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
K I ++ G H + + N +T+G G G G E D N+ +
Sbjct: 319 KRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHG--DENDKITPQVLVNLNNC- 375
Query: 124 GEKIMDAVCGQDHTLF-LTESGKVYSCGWGADGQTGL---GHLNNQETPCLVRGEIEGER 179
+ VC + F L E G +Y GW G G G + P ++ ++ R
Sbjct: 376 ---LAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLEC-LKPHR 431
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ--ISTPRVLSQCKGVSR 231
+ ++S+ + + V+ +G +FG+G++E Q+ ++ + + C G SR
Sbjct: 432 VSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFLHC-GRSR 484
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 205 (77.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 62/202 (30%), Positives = 99/202 (49%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I L+ G + VITD FTFG G+ G G E+ + + L+G I+
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLG---EQSLLMQSTPKLVQSLQGHFII 395
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVR----GEIEGER---I 180
D G H+L LT G V+S G GQ G+G +NQ+T P ++ + + ++ I
Sbjct: 396 DMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINI 455
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR---VLSQCKGVS----RIV 233
+K+S+ +A+SD D + WG S+YG + S + + R VL V + +
Sbjct: 456 IKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTS-IDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 234 DVASGGSACTMLNDEGLVYSWG 255
DV+SG ++ +G +YSWG
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWG 536
Score = 179 (68.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 65/229 (28%), Positives = 106/229 (46%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH--LNNQETPCLVRGEIEGERIVKL 183
KI+ CG + + +T+ G +++ G G G+ GLG L Q TP LV+ ++G I+ +
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQS-LQGHFIIDM 397
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISES--EMQISTPRVLS-------QCKGVSRIVD 234
SS L +++KG VF +G ++ GQ+ Q + P+ + Q + I+
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 235 VASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMK-PTLIPSTLFGQHQFNPKSKV 290
V++GG ++D Y+WG YG+LG V P LI S K
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV----KF 513
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+ +G A++ G LY WG N +LG + E+Q P K + +
Sbjct: 514 IDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSK 562
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/260 (23%), Positives = 114/260 (43%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
++TG H+ ITD +TFG+ G+ G G + E Y +++
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNL--ESYSSPKLVEFFQTKPSLRVVSIAN 250
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G H+L LT GKVYS G Q GLG+ ++ L +++ + + +
Sbjct: 251 GGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSL-------PQLINFNISYN---N 300
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
++ + N+ ++ Q S + S +IV ++ G + ++ D+GL++
Sbjct: 301 NNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLF 360
Query: 253 SWG---YGLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
++G +G LG G + + P L+ S Q F + + +G +TN G
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQSTPKLVQSL---QGHF-----IIDMSSGGGHSLVLTNKGL 412
Query: 309 LYMWGKNQYGQLGLGTVEDQ 328
++ +G+N GQLG+G +Q
Sbjct: 413 VFSFGRNDQGQLGIGCFSNQ 432
Score = 131 (51.2 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 46/174 (26%), Positives = 75/174 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I D++ G G ++V T +K L +F G N QLG + + + F
Sbjct: 394 IIDMSSGGGHSLVLT---NKGL-VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGI-VQEEDYQGKWFCHNIADL 122
+ P IK ++ G H+I I+DN + +G + +G G I VQ + N +
Sbjct: 450 QQPINIIK-VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVV 508
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP--CLVRGE 174
+ K +D G H + ++ G +YS G A + G NQ TP C + +
Sbjct: 509 DNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSK 562
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 57/233 (24%), Positives = 103/233 (44%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
IKI ++CG + V T DK L LF G +LG G L+ S ++
Sbjct: 338 IKIVKLSCGTNRSAVIT---DKGL-LFTFGRGDHGRLGL------GEQSLLMQSTPKLVQ 387
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY---QGKWFCHN 118
++ I +++G H++V+T+ F+FG N GQ G G + Q +WF +
Sbjct: 388 SLQ--GHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTS 445
Query: 119 IADLEGE-KIMDAVCGQDHTLFLTESGKVYSCG---WGADGQTGLGHLNNQETPCLVRGE 174
+ I+ G H++ ++++ Y+ G +G G T + ++ P L+
Sbjct: 446 QQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG-TSIDVQGDRNLPVLINSN 504
Query: 175 ---IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ---ISESEMQISTPR 221
++ + + +SS +A+S G ++ WG + GQ E Q+ TP+
Sbjct: 505 SVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNA-GQRLGFKSDENQL-TPK 555
Score = 62 (26.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
NL FG GL +LG+ + +P +LV F K PS ++ +A G H++ +
Sbjct: 208 NLYTFGDGLLG--KLGHGNLESYSSP-KLVEFF-----QTK-PSLRVVSIANGGKHSLAL 258
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDY 110
T +++G N Q G G Y
Sbjct: 259 TICGKVYSWGGNDSCQLGLGNGSSSSY 285
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 202 (76.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 78/311 (25%), Positives = 143/311 (45%)
Query: 57 VRIPLPVKHPSTQIKHLATGRAHTIVITDNEG-AFTFGNNSF--GQCGRGIVQEEDYQGK 113
+++ + + HP +++ L ++ +D++ A T + G G G +++ Q
Sbjct: 326 LKVNIDIDHPK-RVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG-GTIEQSGSQ-- 381
Query: 114 WFCHNIADLEGEK--IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ I+D+ G ++ CG HT +T SG++++ G G G G G L + P
Sbjct: 382 FLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKP--- 438
Query: 172 RGEIEGERIVKLSSAVDC--------VLAVSDK--------GDVFGWGNSEYGQISESEM 215
E+E R +K+ S V C V +D+ G +F WG+ + G++ ++
Sbjct: 439 -KEVESLRRMKVIS-VSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHAD- 495
Query: 216 QISTPRVLSQCKGVSRIVD-----VASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSM 269
S +++ C V+ ++D V+ G + L+ G VY+ G + GQ G ++
Sbjct: 496 --SKRKLVPTC--VTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDK 551
Query: 270 KPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
++ L QF V+ + +G +T+FG++Y WGK GQLGLG V D+
Sbjct: 552 SVNVVLGNL--TRQF-----VKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRN 604
Query: 330 FPLKVAVGGQK 340
P+ V G +
Sbjct: 605 SPVLVEPLGDR 615
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 63/278 (22%), Positives = 119/278 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G H ++T F +GN + G+ G + + D+ + + LE +
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKR-----VESLEDVAVRS 348
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAV 187
C T +TESG++Y WG DG G + + L R ++ G + LS A
Sbjct: 349 VACSDHQTCAVTESGELYL--WGIDG----GTIEQSGSQFLTRKISDVLGGSLTVLSVAC 402
Query: 188 DC--VLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASG----GS 240
V+ G +F +G+ +G + ++ ++ P+ + + + +++ V+ G +
Sbjct: 403 GAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRM-KVISVSCGPWHTAA 461
Query: 241 ACTMLNDE--------GLVYSWGYGLLGQ-GPKVS-RSMKPTLIPSTLFGQHQFNPKSKV 290
ND G +++WG G G+ G S R + PT + + H F KV
Sbjct: 462 IVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELI--DHDF---IKV 516
Query: 291 ESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
G A++ G +Y G + +GQLG +D+
Sbjct: 517 S---CGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDK 551
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 56/244 (22%), Positives = 100/244 (40%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + +ACG T + T S +LF G + LG+ P E V S R+
Sbjct: 395 LTVLSVACGAWHTAIVTSSG----QLFTYGSGTFGVLGHGSLESVTKPKE-VESLRRM-- 447
Query: 62 PVKHPSTQIKHLATGRAHT--IVITDNEGAFTFGNN-----SFGQCGRGIVQEEDYQGKW 114
++ ++ G HT IV T N+ F + ++G +G + D + K
Sbjct: 448 -------KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKL 500
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+ +L + CG T+ L+ SG VY+ G GQ G ++ +V G
Sbjct: 501 VPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVN-VVLGN 559
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
+ + + ++S V ++ G+V+ WG GQ+ +++ VL + G +
Sbjct: 560 LTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVES 619
Query: 235 VASG 238
+A G
Sbjct: 620 IACG 623
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 142 (55.0 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 34/121 (28%), Positives = 66/121 (54%)
Query: 101 GRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG-L 159
GRG+ Q + + + + +L + I+ CG HTL L++SG +YS WG+ +G L
Sbjct: 16 GRGVNQGDKHIIEPI--EVPELNKKNIVQLSCGSTHTLVLSDSGDLYS--WGSSNSSGQL 71
Query: 160 GH---LNNQETP------CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
GH N P L++ + G+ ++++S+ +D ++D+G ++ WG++ GQ+
Sbjct: 72 GHGDSKNQYGKPKNIKKFSLIKA-LSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQL 130
Query: 211 S 211
+
Sbjct: 131 A 131
Score = 137 (53.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 41/133 (30%), Positives = 75/133 (56%)
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
T KV S G G++ LG + N E ++ ++ +I+++S + +LA+SD+ V+
Sbjct: 334 TTPTKVLSFG-GSNDNNFLGGVINNELQ-MMTDQMNSIKIIQISCGSNHILALSDQYHVY 391
Query: 201 GWGNSEYGQ---------ISESEMQISTPRVLS--QCKGVSRIVDVASGGSACTMLN-DE 248
WG++E+G+ +S++ I++P+ + Q KGV+ ++ V+SG S C L D
Sbjct: 392 SWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVT-VISVSSGYSHCMALTLDS 450
Query: 249 GLVYSWGYGLLGQ 261
G++ +WG G GQ
Sbjct: 451 GIL-TWGKGSDGQ 462
Score = 130 (50.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 42/147 (28%), Positives = 70/147 (47%)
Query: 151 WGADGQTGLGHLNNQ-ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY-G 208
WG G H+ E P E+ + IV+LS L +SD GD++ WG+S G
Sbjct: 15 WGRGVNQGDKHIIEPIEVP-----ELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSG 69
Query: 209 QIS--ESEMQISTPRVL---SQCKGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
Q+ +S+ Q P+ + S K +S ++ V++G +L D+G +Y+WG + GQ
Sbjct: 70 QLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQ 129
Query: 262 ---GPKVSRSMKPTLIPSTLFGQHQFN 285
G V+++ K I + + N
Sbjct: 130 LALGQPVNKNEKENNINNNTTNNNNSN 156
Score = 126 (49.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 62 PVKHPSTQIKH---LATGRAHTIVITDNEGAFTFGN-NSFGQCGRGIVQEEDYQGKWF-- 115
P++ P K+ L+ G HT+V++D+ +++G+ NS GQ G G + + + K
Sbjct: 29 PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKK 88
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQE 166
I L G+ ++ G D T LT+ G +Y+ G +GQ LG +N E
Sbjct: 89 FSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNE 140
Score = 111 (44.1 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 43/142 (30%), Positives = 63/142 (44%)
Query: 200 FGWGNSE--YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG-- 255
FG N G + +E+Q+ T ++ S +I+ ++ G + L+D+ VYSWG
Sbjct: 342 FGGSNDNNFLGGVINNELQMMTDQMNS-----IKIIQISCGSNHILALSDQYHVYSWGSA 396
Query: 256 -YGLLGQGPKVSR-SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
+G LG G S S P I S + V S+ +G A+T + WG
Sbjct: 397 EHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWG 456
Query: 314 KNQYGQLGLGTVED--QPFPLK 333
K GQLG G D PF +K
Sbjct: 457 KGSDGQLGTGFRHDIWSPFEIK 478
Score = 87 (35.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK-GNPLELVMSFVRIPLP 62
I ++CG T+V + S D L +G NS QLG+ D + + G P + + L
Sbjct: 40 IVQLSCGSTHTLVLSDSGD--LYSWGSS-NSSGQLGHGDSKNQYGKPKNIK----KFSLI 92
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG 103
+ ++TG T V+TD + +G+N GQ G
Sbjct: 93 KALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 83 (34.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 38/155 (24%), Positives = 66/155 (42%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH---LNNQE-----TPCLVRG-EIE 176
KI+ CG +H L L++ VYS G G+ G G +Q +P ++ + +
Sbjct: 370 KIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEK 429
Query: 177 GERIVKLSSAVD-CVLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVS-RIV 233
G ++ +SS C+ D G + WG GQ+ I +P + + + +IV
Sbjct: 430 GVTVISVSSGYSHCMALTLDSG-ILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIV 488
Query: 234 DVASG--GSACTMLNDEGLVYSWGYGL-LGQGPKV 265
+ G S L L Y +G+ + LG+ +
Sbjct: 489 QICCGYFNSFFITLEKREL-YQFGWSIPLGKSDDI 522
Score = 53 (23.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+RI ++SG S +LN+ G S G G GQ
Sbjct: 564 NRIKQISSGYSHTLILNENGECLSIGQGEFGQ 595
Score = 52 (23.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
RI ++SS L +++ G+ G E+GQ+
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQL 596
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 198 (74.8 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 48/148 (32%), Positives = 77/148 (52%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
+FG G+N+ QLG D + +P + + +R + ++ +++ G HT V+T +
Sbjct: 26 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LR--------TQKVVYISCGEEHTAVLTKS 75
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTL-FLTESGK 145
G FTFG S GQ G + +E + + +L G ++ CG+ HTL F+ SG
Sbjct: 76 GGVFTFGAGSCGQLGHDSMNDEVNPRR-----VLELMGSEVTQIACGRQHTLAFVPSSGL 130
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRG 173
+Y+ G GA GQ G GH N + P V+G
Sbjct: 131 IYAFGCGAKGQLGTGHTCNVKCPSPVKG 158
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/126 (33%), Positives = 68/126 (53%)
Query: 87 EGA-FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
EGA F +G N+ GQ G + EED + CH + L +K++ CG++HT LT+SG
Sbjct: 23 EGAVFGWGMNNAGQLG--LSDEEDRESP--CH-VKLLRTQKVVYISCGEEHTAVLTKSGG 77
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA-VSDKGDVFGWGN 204
V++ G G+ GQ G +N++ P V E+ G + +++ LA V G ++ +G
Sbjct: 78 VFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 136
Query: 205 SEYGQI 210
GQ+
Sbjct: 137 GAKGQL 142
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 144 GKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFG 201
G V+ GWG + GQ GL ++E+PC V+ + +++V +S + ++ G VF
Sbjct: 24 GAVF--GWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 202 WGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASGGS-ACTMLNDEGLVYSWGYGLL 259
+G GQ+ M PR + + G S + +A G + GL+Y++G G
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMG-SEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 260 GQ 261
GQ
Sbjct: 140 GQ 141
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 199 (75.1 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 73/286 (25%), Positives = 126/286 (44%)
Query: 68 TQIKHLATGRAHTIVITDNEGAFTFGN--NSFGQCGRGIVQEEDYQGKWFCHNIAD-LEG 124
T I +A G HT V++ + F++G+ ++ G G G D W ++ LEG
Sbjct: 303 TNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHG----SDIS-HWIPKRVSGPLEG 357
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLS 184
+++ CG H+ T +GK+++ G GA G G G+ + P V+ + G + VK++
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQS-LNGLKTVKVA 416
Query: 185 SAVDCVLAVSD-KGD---------VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
++ A+ + G +F WG+ + ++ + +L C VS ++D
Sbjct: 417 CSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETY---LLPTC--VSSLID 471
Query: 235 -----VASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKS 288
+A G + L G V++ G GQ G +S P L+ L G+
Sbjct: 472 YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEF------ 525
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
VE + G +T+ ++ WGK G+LG G ED+ P V
Sbjct: 526 -VEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLV 570
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 78/304 (25%), Positives = 133/304 (43%)
Query: 51 ELVMSFVRIPLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEED 109
E V + V P P++ + + + G H ++T FT+G G+ G GI Q +
Sbjct: 233 ETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGI-QVDI 291
Query: 110 YQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE--T 167
+ K + L I CG+ HT ++ SG ++S G G LGH ++
Sbjct: 292 SRPKL----VEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWI 347
Query: 168 PCLVRGEIEGERIVKLSSAV-DCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQ 225
P V G +EG +++ ++ LA ++ G +F +G+ +G + + +S P+ +
Sbjct: 348 PKRVSGPLEGLQVLSVACGTWHSALATAN-GKLFTFGDGAFGVLGHGNRESVSYPKEVQS 406
Query: 226 CKGVSRIVDVASG-----------GSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKP 271
G+ + V VA G T ++ L ++WG G LG G K + + P
Sbjct: 407 LNGL-KTVKVACSIWHTAAIVEVMGQTATSMSSRKL-FTWGDGDKNRLGHGNKETYLL-P 463
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFG-AITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
T + S + + F+ IA TF A+T GH++ G +GQLG ++ D
Sbjct: 464 TCVSSLI--DYNFHK-------IACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGKL 513
Query: 331 PLKV 334
P V
Sbjct: 514 PCLV 517
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/110 (34%), Positives = 53/110 (48%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVC 132
+A G T+ +T + FT G + GQ G I D GK C L GE + + C
Sbjct: 477 IACGHTFTVALTTSGHVFTMGGTAHGQLGNSI---SD--GKLPCLVQDRLVGEFVEEIAC 531
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVK 182
G H LT +V++ G GA+G+ G G ++ TP LV E +R VK
Sbjct: 532 GAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLV--EALRDRHVK 579
Score = 128 (50.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 57/212 (26%), Positives = 95/212 (44%)
Query: 144 GKVYSCG--WGADGQTGLGHLNNQ--ETPCLVRGEIEGERIVKLSSAVDC----VLAVSD 195
G VY G W +G G +N+ +T L +E ++ + V C V V+
Sbjct: 211 GDVYVWGEVW-TEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIV-CGVRHVALVTR 268
Query: 196 KGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
+G+VF WG G++ ++ IS P+++ + ++ I VA G +++ G ++SW
Sbjct: 269 QGEVFTWGEEVGGRLGHGIQVDISRPKLV-EFLALTNIDFVACGEYHTCVVSTSGDLFSW 327
Query: 255 G-----YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
G GLLG G +S + P + L G +V S+ G T G L
Sbjct: 328 GDGIHNVGLLGHGSDISHWI-PKRVSGPLEGL-------QVLSVACGTWHSALATANGKL 379
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+ +G +G LG G E +P +V ++ G K
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQSLNGLK 411
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 60/228 (26%), Positives = 94/228 (41%)
Query: 122 LEGEKIMDA---VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEG 177
LE ++D VCG H +T G+V++ G G+ G G + P LV +
Sbjct: 245 LESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTN 304
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEY--GQISE-SEMQISTP-RVLSQCKGVSRIV 233
V CV VS GD+F WG+ + G + S++ P RV +G+ +++
Sbjct: 305 IDFVACGEYHTCV--VSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVL 361
Query: 234 DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV 290
VA G + G ++++G +G+LG G + S S P + S L G +
Sbjct: 362 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSY-PKEVQS-LNGLKTVKVACSI 419
Query: 291 ESLIAGPCTFG-AITNFGH--LYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A G T+ L+ WG +LG G E P V+
Sbjct: 420 WHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVS 467
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 77/279 (27%), Positives = 126/279 (45%)
Query: 61 LPVKHPS-TQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
LP K S + + ++ G H + N T+G GQ G G + + K I
Sbjct: 796 LPFKLESLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQ-IEPKI----I 850
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLGHLNNQETPCLVRGEIEG 177
L I CG+ HT+ LT++GKVYS WGA GQ GLG + +P V +E
Sbjct: 851 QSLTSFWITQVQCGEKHTICLTKNGKVYS--WGASEYGQLGLGDVTQHSSPMQVSA-LEK 907
Query: 178 ERIVKLSS-AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVA 236
+++++S + C + + K +V +GN G + +S P ++ K + I +
Sbjct: 908 YNVLQIASGSTHCAVLTTSK-EVLVFGN---GAAMGAASVVSLPTLVPSLKYL-HIDRLC 962
Query: 237 SGGSACTMLNDEGLVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
G + + + G VY+WG G LG G S P LI + ++Q + +
Sbjct: 963 CGHYSTAAITECGDVYTWGTGQELGHGGN-STETSPKLIEAL---RNQ-----SIRQISC 1013
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +T+ G ++ GK+ +GQLG + DQ P ++
Sbjct: 1014 GGRHTAFLTDSGRIFTCGKDSFGQLGQMS-GDQNKPKRI 1051
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 191 (72.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 94/336 (27%), Positives = 138/336 (41%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
SK + FGC N + LG D +G+ E+V ++ L K + ++ G +H
Sbjct: 83 SKSGQVYSFGC--NDEGALG-RDTSVEGS--EMVPG--KVDLQEK-----VIQVSAGDSH 130
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
T +T++ F +G SF G++ + K L ++ G DH +
Sbjct: 131 TAALTEDGRVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLS-VPVVKVASGNDHLVM 186
Query: 140 LTESGKVYSCGWGADGQTGL--------GHLNNQE---TPCLVRGEIEGER-IVKLSSAV 187
LT G +Y+ G G GQ G G E P V + G R V+ A
Sbjct: 187 LTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 188 DC----VLAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
C A+S +G V+G+G S Y Q+ ++ P+ L+ K ++ SGG
Sbjct: 247 -CGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 243 TMLND-EGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPC 298
T+ D EG YS G YG LG G PTLIP P V S+ G
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRL--------PT--VSSVACGAS 355
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG QLG G ED P+++
Sbjct: 356 VGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 75/278 (26%), Positives = 125/278 (44%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
LP K ++ H + G +V+T G GQ G G E + K +
Sbjct: 17 LP-KSKKVKVSHRSHGTEPGVVLT-------LGQGDVGQLGLG---ENVMERKKPA--LV 63
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GER 179
+ E I+ A G HT+ L++SG+VYS G +G LG + E +V G+++ E+
Sbjct: 64 SIP-EDIVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVDLQEK 120
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
++++S+ A+++ G VF WG+ G I E + V Q + +V VAS
Sbjct: 121 VIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLSVPVVKVAS 179
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPK 287
G ML +G +Y+ G G LG+ P++ + ++ L+P +
Sbjct: 180 GNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH 239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
+ + G AI++ GH+Y +G + Y QLG GT
Sbjct: 240 VRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGT 277
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 68/281 (24%), Positives = 116/281 (41%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G T T+ D + L+G +++ +G +P KK +V V++ +P
Sbjct: 120 KVIQVSAGDSHTAALTE--DGRVFLWGSFRDNNGVIGLLEPMKKS----MVPVQVQLSVP 173
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG---IVQEEDYQG--KWFCH 117
V +K +A+G H +++T + +T G+ GQ GR QG +
Sbjct: 174 V------VK-VASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 118 NIADLEGE------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
L+ + DA CG T ++ G VY G+G LG + C V
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVY--GFGLSNYHQLGTQGTES--CFV 282
Query: 172 RGEIEG-----ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLS 224
+ + V S + + +G + G +EYG++ E + S P ++
Sbjct: 283 PQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIP 342
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQG 262
+ VS + AS G A T +G V++WG G LG G
Sbjct: 343 RLPTVSSVACGASVGYAVTK---DGRVFAWGMGTNYQLGTG 380
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 186 (70.5 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 89/326 (27%), Positives = 147/326 (45%)
Query: 24 NLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVI 83
N+ FGC N + LG D ++G+ E V + ++ L K I ++ G +H+ +
Sbjct: 87 NVYTFGC--NDEGALG-RDTSEEGS--ETVPA--KVDLGEK-----IIQVSAGDSHSAAL 134
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK-IMDAVCGQDHTLFLTE 142
T++ G + +G SF G++ + K C + +K ++ V G DH + LT
Sbjct: 135 TEDGGVYVWG--SFRD-NNGVIGLLEPMKK--CTVPVKVPIDKPVVKIVSGNDHLVMLTA 189
Query: 143 SGKVYSCGWGADGQTG--LGHLNNQETPCLVRGEIEGER-IVK-----LSSAVDC----V 190
G++Y+ G G GQ G H N+ + +E + I+K + + V C
Sbjct: 190 HGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFT 249
Query: 191 LAVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTM-LNDE 248
AVS +G V+G+G S Y Q+ ++S P LS K + SGG T+ LN E
Sbjct: 250 FAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSE 309
Query: 249 GLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
G YS G G+ + + + P+ + G S V+ + G A+T G
Sbjct: 310 GKAYSLGRAEYGR-LGLGKDVGEKSEPTVVPGI------SDVQVVACGASVSYAVTKQGS 362
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WG QLG G ED+ P+++
Sbjct: 363 VFSWGMGTNLQLGTGEEEDEWSPVEM 388
Score = 161 (61.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 73/279 (26%), Positives = 125/279 (44%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ H++ G+ +V+ G GQ G G ED + + EG I+
Sbjct: 24 KVSHISHGQEKGLVLV-------LGQGDVGQLGLG----EDVMERKKPALVTLPEG--IV 70
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSSAV 187
AV G HT+ L+++G VY+ G +G LG ++E V +++ GE+I+++S+
Sbjct: 71 QAVAGGMHTVCLSDTGNVYTFGCNDEG--ALGRDTSEEGSETVPAKVDLGEKIIQVSAGD 128
Query: 188 DCVLAVSDKGDVFGWGN--SEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
A+++ G V+ WG+ G I E + + P + K V +IV SG
Sbjct: 129 SHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIV---SGNDHLV 185
Query: 244 MLNDEGLVYSWGYGLLGQGPKVS-----RSMKPTLIPSTLFGQHQFNPKSKV--ESLIAG 296
ML G +Y+ G G GQ +V+ R + L+ P+ KV + G
Sbjct: 186 MLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCG 245
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
A++ GH+Y +G + Y QLG + P+K++
Sbjct: 246 AYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLS 284
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
GQ HTL L GK YS G G+ GLG + + P +V G I ++V ++V
Sbjct: 299 GQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPG-ISDVQVVACGASVS--Y 355
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIV-DVASGGSACTML 245
AV+ +G VF WG Q+ E + +P ++ + +R+V V+SGG +L
Sbjct: 356 AVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLL 411
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 18 TKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGR 77
T + K ++G GL++ QLG P++L SF K+ +T + G+
Sbjct: 249 TFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKL-SSF-------KNSTTSWVGFSGGQ 300
Query: 78 AHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHT 137
HT+ + A++ G +G+ G G E + I+D++ CG +
Sbjct: 301 HHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPT-VVPGISDVQV-----VACGASVS 354
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD-CVLAVSD 195
+T+ G V+S G G + Q G G ++ +P + G ++E ++ +SS VL V D
Sbjct: 355 YAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 414
Query: 196 K 196
K
Sbjct: 415 K 415
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 188 (71.2 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 88/344 (25%), Positives = 143/344 (41%)
Query: 2 IKITDIACGYG-FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +A G F VA D + + G N QLG+ D ++ P V+S +
Sbjct: 56 VNIRFVATGCASFHCVAL---DVEGRCYTWGRNEKGQLGHGDMIQRDRPT--VVSGLS-- 108
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
KH +I A GR HT+V++D+ + FG N +GQ G G + + +
Sbjct: 109 ---KH---KIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLP 162
Query: 121 DLEGEKIMDAVCGQDHTLFL--TESGKVYSCGWGADGQTGLG---HLNNQETPCLVRGEI 175
+ +++ + CG D T++L TE + + G GQ G G N +++ + E
Sbjct: 163 CVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEA 222
Query: 176 E----------GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLS 224
+ GE IVK++ + +AV G V+ WG YG++ E + PR +
Sbjct: 223 QPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRID 282
Query: 225 --QCKGV---SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF 279
Q V + I+ S SACT G +Y WG K+ + + P +
Sbjct: 283 VFQRNNVLPPNAILSAGSANSACTA--GGGQLYMWG--------KIKNNGDDWMYPKPMM 332
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
+N + + GA ++ WG QYG+LG G
Sbjct: 333 DLSGWNLRWMDSGSMHH--FVGADSS---CISWGHAQYGELGYG 371
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 58/222 (26%), Positives = 98/222 (44%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
C H + L G+ Y+ G GQ G G + ++ P +V G + +IVK ++ + +
Sbjct: 65 CASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSG-LSKHKIVKAAAGRNHTV 123
Query: 192 AVSDKGDVFGWGNSEYGQISESE-----MQISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
VSD G G+G ++YGQ+ + + C + +VA G L+
Sbjct: 124 VVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLS 183
Query: 247 D-EGL-VYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV----ESLIAGP 297
EG + + G YG LG G +MK + + L + Q PK+ E+++
Sbjct: 184 STEGASILTAGLPQYGQLGHGTDNEFNMKDSSV--RLAYEAQPRPKAIASLAGETIVKVA 241
Query: 298 CTFG---AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
C A+ G++Y WG YG+LG +D+ P ++ V
Sbjct: 242 CGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDV 283
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 82/297 (27%), Positives = 123/297 (41%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI A G TVV + D L G G N QLG + +E+ + PLP
Sbjct: 111 KIVKAAAGRNHTVVVS---DDGQSL-GFGWNKYGQLGLGSAKNGFVSVEVEST----PLP 162
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGA--FTFGNNSFGQCGRGIVQE---ED------YQ 111
S ++ ++A G T+ ++ EGA T G +GQ G G E +D Y+
Sbjct: 163 CV-VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYE 221
Query: 112 GKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
+ IA L GE I+ CG +HT+ + ++G VY+ G+G G+ LGH ++
Sbjct: 222 AQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGR--LGHREQKDEWAPR 279
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEY--GQISESEMQISTPRVLSQCKGV 229
R ++ V +A+ + A S G Y G+I + P+ + G
Sbjct: 280 RIDVFQRNNVLPPNAI--LSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGW 337
Query: 230 S-RIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH 282
+ R +D GS + + SWG YG LG GP +S L G H
Sbjct: 338 NLRWMD---SGSMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMH 391
Score = 152 (58.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 81/320 (25%), Positives = 129/320 (40%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRI-PLPVKHPSTQIKHLATGRA 78
S++K +L CG + +G +GN ++S R+ PL I+ +ATG A
Sbjct: 15 SEEKGGELLFCGATAWDIIGKRKGAMEGN----LVSPTRLRPLV----GVNIRFVATGCA 66
Query: 79 --HTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQ---GKWFCHNIADLEGEKIMDAVC 132
H + + D EG +T+G N GQ G G + + D H I + V
Sbjct: 67 SFHCVAL-DVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVV 125
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP--CLVRGEIEGERIVKLSSAVDCV 190
D K G G+ + G + + TP C+V E+ V +
Sbjct: 126 SDDGQSLGFGWNKYGQLGLGS-AKNGFVSVEVESTPLPCVVSDEVTN---VACGADFTVW 181
Query: 191 LAVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQC----KGVSR-----IVDVA 236
L+ ++ + G +YGQ+ +E M+ S+ R+ + K ++ IV VA
Sbjct: 182 LSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVA 241
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTL--FGQHQFNPKSKVESLI 294
G + ++ G VY+WG+G G G R K P + F ++ P + + L
Sbjct: 242 CGTNHTVAVDKNGYVYTWGFG--GYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAI--LS 297
Query: 295 AGPCTFGAITNFGHLYMWGK 314
AG G LYMWGK
Sbjct: 298 AGSANSACTAGGGQLYMWGK 317
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 60/207 (28%), Positives = 91/207 (43%)
Query: 142 ESGKVYSCG---WGADGQTGLGHLNNQETPCLVRGEIEGE-RIVKLSSA-VDCVLAVSDK 196
+ G++ CG W G+ N +P +R + R V A CV A+ +
Sbjct: 18 KGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCV-ALDVE 76
Query: 197 GDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSR--IVDVASGGSACTMLNDEG--LV 251
G + WG +E GQ+ +M Q P V+S G+S+ IV A+G + +++D+G L
Sbjct: 77 GRCYTWGRNEKGQLGHGDMIQRDRPTVVS---GLSKHKIVKAAAGRNHTVVVSDDGQSLG 133
Query: 252 YSWG-YGLLGQGPK----VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
+ W YG LG G VS ++ T +P + N + + T GA
Sbjct: 134 FGWNKYGQLGLGSAKNGFVSVEVESTPLPCVV-SDEVTNVACGADFTVWLSSTEGA---- 188
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLK 333
+ G QYGQLG GT D F +K
Sbjct: 189 -SILTAGLPQYGQLGHGT--DNEFNMK 212
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 190 (71.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 69/266 (25%), Positives = 116/266 (43%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
+ + G AH V+T + +T+ N G G + D ++ L+G+ +
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKV 413
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSSAVD 188
CG D T+ +T+ G++YS G G G+ E P LV + E + ++S
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLN-EPVDQVSCGDS 472
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
++A++ V+ WG EYG++ +SE + +P+ + +G+ IV+V G +L
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLC-IVNVCCGSDGSFLLTL 531
Query: 248 EGLVYSWG---YGLLGQGPKVSRSMK-------PTLIPSTLFGQHQFNPKSKVESLIAGP 297
G V + G + LG + + P TL Q F K+ S+ G
Sbjct: 532 TGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFY---KIRSISPGR 588
Query: 298 CTFGAITNFGHLYMWGKNQYGQLGLG 323
AI G L +G N+ GQLG+G
Sbjct: 589 THTAAIDERGRLLTFGSNKCGQLGVG 614
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 203 GNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG---YGL 258
G+ +GQ+ + P+ + + +G S + V+ G + DEG +YS+G YG
Sbjct: 381 GSKLHGQLGHGDRASYRQPKHVEKLQGKS-VQKVSCGSDFTVCITDEGQLYSFGSDYYGC 439
Query: 259 LGQGPKV-SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQY 317
LG S ++P L+ F V+ + G A+T +Y WG +Y
Sbjct: 440 LGVNQSAGSEVLEPLLV--------DFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEY 491
Query: 318 GQLGLGTVEDQPFPLKVAV 336
G+LGL + +D P KV V
Sbjct: 492 GRLGLDSEDDVYSPQKVEV 510
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRK---KGNPLELVMSFVRIP 60
I ++ CG + + T + K+ CGLN ++LG + + V +
Sbjct: 516 IVNVCCGSDGSFLLTLTG----KVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLT 571
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI- 119
L + +I+ ++ GR HT I + TFG+N GQ G G DY+ K N+
Sbjct: 572 LAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVG-----DYR-KHLGINLL 625
Query: 120 -ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
L G++++ CG + T T +++ G G +G+ +
Sbjct: 626 GGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 64/277 (23%), Positives = 119/277 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
++ ++ G T+ ITD ++FG++ +G C G+ Q + + D + +D
Sbjct: 410 VQKVSCGSDFTVCITDEGQLYSFGSDYYG-C-LGVNQSAG--SEVLEPLLVDFFLNEPVD 465
Query: 130 AV-CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVD 188
V CG H + LT S VYS G G G+ GL ++ +P V + G IV + D
Sbjct: 466 QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ-RGLCIVNVCCGSD 524
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS-----------ESEMQISTPRVLSQCKGVS--RIVDV 235
++ G V G +E+ ++ E+ ++ L+ K +S +I +
Sbjct: 525 GSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSI 584
Query: 236 ASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+ G + +++ G + ++G G LG G + + L+ L G+ +V
Sbjct: 585 SPGRTHTAAIDERGRLLTFGSNKCGQLGVGD-YRKHLGINLLGGPLGGK-------QVIR 636
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
+ G A T H++ WG G+L + T ++P
Sbjct: 637 VSCGDEFTTAATADNHIFAWGNGGNGRLAM-TPNERP 672
Score = 119 (46.9 bits), Expect = 0.00076, P = 0.00076
Identities = 46/215 (21%), Positives = 93/215 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG + T+SK ++ +GCG L DS+ + P+K +E+ +
Sbjct: 464 VDQVSCGDSHIMALTRSK--SVYSWGCGEYGRLGLDSEDDVYSPQK----VEVQRGLCIV 517
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
+ + + L TG+ + ++ G N + GI+ E +Q + ++
Sbjct: 518 NVCCGSDGSFLLTL-TGKVLACGLNEHN---KLGLNQYTA---GIINHEAFQEVPYTTSL 570
Query: 120 A---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
L KI G+ HT + E G++ + G GQ G+G L+ G +
Sbjct: 571 TLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLG 630
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + A + +F WGN G+++
Sbjct: 631 GKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLA 665
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 89/345 (25%), Positives = 141/345 (40%)
Query: 7 IACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHP 66
I+CG + V+ TK +++ G S +LG+ G V S+V P +
Sbjct: 304 ISCGTNYAVLVTKQG----QMYSWGEESGGRLGH------G-----VCSYVPHPKLIDEF 348
Query: 67 STQIKHLAT-GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI-ADLEG 124
+ LA G HT +T + + +G+ G G++ W I +EG
Sbjct: 349 NGSTVELADCGEFHTCAVTASGDLYAWGD---GDHNAGLLGLGSGASHWKPVRILGQMEG 405
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL- 183
+ CG HT F+T GK+++ G G G G G + P V + G R +K
Sbjct: 406 IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGCRTIKAA 464
Query: 184 -----SSAVDCVLA-VSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVA 236
S+AV V + G +F WG+ + G++ +++ P +++ S VA
Sbjct: 465 CGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTS-FQQVA 523
Query: 237 SGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
G S L+ G VY+ G P P+ I L G KS V+ + G
Sbjct: 524 CGQSITVALSMSGQVYAMGTA----DPSHDIVRAPSCIEGGL-G------KSFVQEVACG 572
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV-AVGGQK 340
+ + +Y WGK GQLG G E + P V A+ G++
Sbjct: 573 FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQ 617
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 65/281 (23%), Positives = 124/281 (44%)
Query: 45 KKGNPLELVM-SFVRIPLPVK-HPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR 102
K G+ L+ SF +P +K H + + ++ G + +++T +++G S G+ G
Sbjct: 276 KSGSSSSLMTDSF--LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGH 333
Query: 103 GIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--GQTGLG 160
G+ + I + G + A CG+ HT +T SG +Y+ G G G GLG
Sbjct: 334 GVCSYVPHPKL-----IDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLG 388
Query: 161 HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST- 219
+ P + G++EG + +S V+ +G +F +G+ +G + + +IST
Sbjct: 389 SGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGD-RISTN 447
Query: 220 -PR---VLSQCKGVSRIVDVASGGSACTMLND---EGLVYSWGYGLLGQGPKVSRSMKPT 272
PR L+ C+ + V + ++ + G +++WG G G ++
Sbjct: 448 IPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDG--DDGRLGHGDIECR 505
Query: 273 LIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
LIPS + + + S + + G A++ G +Y G
Sbjct: 506 LIPSCVT---ELDTTS-FQQVACGQSITVALSMSGQVYAMG 542
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 179 (68.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 51/173 (29%), Positives = 88/173 (50%)
Query: 69 QIKHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
Q+ + +G AH+++IT +++G N GQ G G + + I L E
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKL-----IEGLGEEV 176
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEGERIVKLSS 185
I+ A CG++HTL LTE+G VY+ G GQ G G+ + +P + + G+ IVK++
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATI--QYNGQPIVKVAC 234
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQI---SESEMQISTPRVLSQCKGVSRIVDV 235
+ + V KG+++ +G EYGQ+ S+ + R+ C+ + R V +
Sbjct: 235 GAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAI 287
Score = 144 (55.7 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 45/157 (28%), Positives = 71/157 (45%)
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAV 187
D CG +HTL L +V+S G+G G+ G ++ P LV+ + G ++
Sbjct: 307 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGY 366
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
C A+S+ G +F WG + + ES M P+ + G +I +A G S+ + D
Sbjct: 367 QCSFALSEMGGLFFWGVTNTSR--ESTMY---PKAVQDLCGW-KIRSLACGKSSIIVAAD 420
Query: 248 EGLVYSWG----YGLLGQGPKVSRSMKPTLIPSTLFG 280
+ + SWG +G LG G +S TL G
Sbjct: 421 DSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDG 456
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 75/324 (23%), Positives = 127/324 (39%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
KL+ G N QLG+ D ++ P +L+ I A GR HT+ +T+
Sbjct: 143 KLWSWGRNDKGQLGHGDTKRLEAP-KLIEGL---------GEEVIVAAACGRNHTLALTE 192
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
N +TFG N GQ G+G + +N G+ I+ CG + ++ + G
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN-----GQPIVKVACGAEFSMIVDCKGN 247
Query: 146 VYSCGWGADGQTG-------LGHLNNQETPC-LVRGEI--------EGERIVK---LSSA 186
+YS G GQ G + E C L+ + +G+ + ++
Sbjct: 248 LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARD 307
Query: 187 VDC----VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSA 241
V C L + + VF WG YG++ +E + PR++ R G
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQ 367
Query: 242 CTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTF 300
C+ L++ G ++ WG + S + T+ P + Q K+ SL G +
Sbjct: 368 CSFALSEMGGLFFWGV--------TNTSRESTMYPKAV----QDLCGWKIRSLACGKSSI 415
Query: 301 GAITNFGHLYMWGKNQ-YGQLGLG 323
+ + WG + +G+LG G
Sbjct: 416 IVAADDSTI-SWGPSPTFGELGYG 438
Score = 129 (50.5 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 38/133 (28%), Positives = 70/133 (52%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
L ++ +G ++ WG ++ GQ+ + + + P+++ G IV A G + L + G
Sbjct: 136 LIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGL-GEEVIVAAACGRNHTLALTENG 194
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF-GH 308
VY++G LGQ + +++ L P+T+ Q+N + V+ +A F I + G+
Sbjct: 195 TVYTFGENKLGQLGQGNQT-DAVLSPATI----QYNGQPIVK--VACGAEFSMIVDCKGN 247
Query: 309 LYMWGKNQYGQLG 321
LY +G +YGQLG
Sbjct: 248 LYSFGCPEYGQLG 260
Score = 68 (29.0 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 25/98 (25%), Positives = 43/98 (43%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I ACG T+ T+ N ++ G N QLG +GN + V+S P +
Sbjct: 177 IVAAACGRNHTLALTE----NGTVYTFGENKLGQLG------QGNQTDAVLS----PATI 222
Query: 64 KHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
++ I +A G ++++ ++FG +GQ G
Sbjct: 223 QYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLG 260
Score = 46 (21.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFP 331
++ WG YG+LG +D+ P
Sbjct: 324 VFSWGFGGYGRLGHAEQKDEMVP 346
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 152 (58.6 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 44/132 (33%), Positives = 74/132 (56%)
Query: 126 KIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIEGERIV 181
KI+D G DH ++FL ESGKVY+ G+ +G+ G G N ++ P L+ I +I+
Sbjct: 755 KIID---GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN--ICVNKII 809
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG--G 239
K++ + VL VSD G V+GWG ++ Q+ ++ V K ++ ++++ +G
Sbjct: 810 KIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPV--HVKNLTNVINIFAGYDH 867
Query: 240 SACTM--LNDEG 249
SAC + L D+G
Sbjct: 868 SACIINKLLDKG 879
Score = 147 (56.8 bits), Expect = 4.9e-11, Sum P(4) = 4.9e-11
Identities = 35/138 (25%), Positives = 72/138 (52%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D + ++ G H+L G +YS G+G +G+ GLG++ + P L++G + +RI
Sbjct: 435 DKKKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKG-LRNKRI 493
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES--EMQISTPRVLSQCKGVSRIVDVASG 238
+ + + + +V+ WGN ++ ++ ++ I P+++ +C ++ V + S
Sbjct: 494 LYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV-ECLNHNKKVCMLSF 552
Query: 239 GSACTM-LNDEGLVYSWG 255
G ++ LN +G VY WG
Sbjct: 553 GCFNSLALNVKGDVYVWG 570
Score = 95 (38.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 46/185 (24%), Positives = 80/185 (43%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H + G H++ + +++G G+ G G ++ Y I L ++I+
Sbjct: 443 HCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKS--YNKPQL---IKGLRNKRILYVC 497
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVKLSSAVD 188
G H+ + + VY+ WG LGH N+ P LV +++ LS
Sbjct: 498 AGTSHSGCIDSNYNVYT--WGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCF 555
Query: 189 CVLAVSDKGDVFGWGN----SEYGQ--ISESEMQISTP-RVLS------QCKGVSRIVDV 235
LA++ KGDV+ WG + Y IS+ QI+T + +S C G++ + D+
Sbjct: 556 NSLALNVKGDVYVWGTFNITNNYVNYYISKLPKQINTNYKCISIHASTYVCFGITLVGDL 615
Query: 236 ASGGS 240
S G+
Sbjct: 616 ISFGN 620
Score = 86 (35.3 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 34/138 (24%), Positives = 58/138 (42%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASG 238
++ S+ LA + GD++ WG G++ ++ + P+++ + RI+ V +G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRN-KRILYVCAG 499
Query: 239 GSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
S ++ VY+WG G LG G P L+ N KV L
Sbjct: 500 TSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVEC-------LNHNKKVCMLSF 552
Query: 296 GPCTFGAITNFGHLYMWG 313
G A+ G +Y+WG
Sbjct: 553 GCFNSLALNVKGDVYVWG 570
Score = 77 (32.2 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 30/109 (27%), Positives = 49/109 (44%)
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL-IPSTLFGQHQFN 285
K +I+D + S L + G VY+ GY G+ ++K +P L N
Sbjct: 751 KSKVKIIDGSDHFSV--FLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILL--NICVN 806
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K+ + G +++ G +Y WGKN QLG+G ++D P+ V
Sbjct: 807 ---KIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHV 852
Score = 76 (31.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 56 FVRIPLPVKHP--STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ 106
F P+ + P +T+IK ++ G HT+ I +++G N+FG G G Q
Sbjct: 335 FTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQ 387
Score = 56 (24.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 307 GHLYMWGKNQYGQLGLG 323
G LY+WG + G++GLG
Sbjct: 905 GDLYIWGNAESGKVGLG 921
Score = 52 (23.4 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGA-ITNFGHLYMWGKNQYGQLGLG 323
+F +++ KSKV+ +I G F + G +Y G N+ G+LG G
Sbjct: 742 IFEKNKLVLKSKVK-IIDGSDHFSVFLLESGKVYTAGYNKNGELGNG 787
Score = 47 (21.6 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 4 ITDIAC-GYG-FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLE 51
+ I C Y F +V D ++ G ++ LGY R+ N LE
Sbjct: 75 VASICCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKRELPNFLE 124
Score = 39 (18.8 bits), Expect = 6.1e-10, Sum P(4) = 6.1e-10
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLY 310
H + V+ L+ G ++ + N H+Y
Sbjct: 1350 HNYKNVKNVKQLMYGKMSYNSNKNTTHIY 1378
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 152 (58.6 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 44/132 (33%), Positives = 74/132 (56%)
Query: 126 KIMDAVCGQDH-TLFLTESGKVYSCGWGADGQTGLGHLNNQE---TPCLVRGEIEGERIV 181
KI+D G DH ++FL ESGKVY+ G+ +G+ G G N ++ P L+ I +I+
Sbjct: 755 KIID---GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN--ICVNKII 809
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG--G 239
K++ + VL VSD G V+GWG ++ Q+ ++ V K ++ ++++ +G
Sbjct: 810 KIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPV--HVKNLTNVINIFAGYDH 867
Query: 240 SACTM--LNDEG 249
SAC + L D+G
Sbjct: 868 SACIINKLLDKG 879
Score = 147 (56.8 bits), Expect = 4.9e-11, Sum P(4) = 4.9e-11
Identities = 35/138 (25%), Positives = 72/138 (52%)
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERI 180
D + ++ G H+L G +YS G+G +G+ GLG++ + P L++G + +RI
Sbjct: 435 DKKKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKG-LRNKRI 493
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEYGQISES--EMQISTPRVLSQCKGVSRIVDVASG 238
+ + + + +V+ WGN ++ ++ ++ I P+++ +C ++ V + S
Sbjct: 494 LYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV-ECLNHNKKVCMLSF 552
Query: 239 GSACTM-LNDEGLVYSWG 255
G ++ LN +G VY WG
Sbjct: 553 GCFNSLALNVKGDVYVWG 570
Score = 95 (38.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 46/185 (24%), Positives = 80/185 (43%)
Query: 72 HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAV 131
H + G H++ + +++G G+ G G ++ Y I L ++I+
Sbjct: 443 HCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKS--YNKPQL---IKGLRNKRILYVC 497
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET---PCLVRGEIEGERIVKLSSAVD 188
G H+ + + VY+ WG LGH N+ P LV +++ LS
Sbjct: 498 AGTSHSGCIDSNYNVYT--WGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCF 555
Query: 189 CVLAVSDKGDVFGWGN----SEYGQ--ISESEMQISTP-RVLS------QCKGVSRIVDV 235
LA++ KGDV+ WG + Y IS+ QI+T + +S C G++ + D+
Sbjct: 556 NSLALNVKGDVYVWGTFNITNNYVNYYISKLPKQINTNYKCISIHASTYVCFGITLVGDL 615
Query: 236 ASGGS 240
S G+
Sbjct: 616 ISFGN 620
Score = 86 (35.3 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 34/138 (24%), Positives = 58/138 (42%)
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGVSRIVDVASG 238
++ S+ LA + GD++ WG G++ ++ + P+++ + RI+ V +G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRN-KRILYVCAG 499
Query: 239 GSACTMLNDEGLVYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA 295
S ++ VY+WG G LG G P L+ N KV L
Sbjct: 500 TSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVEC-------LNHNKKVCMLSF 552
Query: 296 GPCTFGAITNFGHLYMWG 313
G A+ G +Y+WG
Sbjct: 553 GCFNSLALNVKGDVYVWG 570
Score = 77 (32.2 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 30/109 (27%), Positives = 49/109 (44%)
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL-IPSTLFGQHQFN 285
K +I+D + S L + G VY+ GY G+ ++K +P L N
Sbjct: 751 KSKVKIIDGSDHFSV--FLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILL--NICVN 806
Query: 286 PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K+ + G +++ G +Y WGKN QLG+G ++D P+ V
Sbjct: 807 ---KIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHV 852
Score = 76 (31.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 56 FVRIPLPVKHP--STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ 106
F P+ + P +T+IK ++ G HT+ I +++G N+FG G G Q
Sbjct: 335 FTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQ 387
Score = 56 (24.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 307 GHLYMWGKNQYGQLGLG 323
G LY+WG + G++GLG
Sbjct: 905 GDLYIWGNAESGKVGLG 921
Score = 52 (23.4 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 278 LFGQHQFNPKSKVESLIAGPCTFGA-ITNFGHLYMWGKNQYGQLGLG 323
+F +++ KSKV+ +I G F + G +Y G N+ G+LG G
Sbjct: 742 IFEKNKLVLKSKVK-IIDGSDHFSVFLLESGKVYTAGYNKNGELGNG 787
Score = 47 (21.6 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 4 ITDIAC-GYG-FTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLE 51
+ I C Y F +V D ++ G ++ LGY R+ N LE
Sbjct: 75 VASICCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKRELPNFLE 124
Score = 39 (18.8 bits), Expect = 6.1e-10, Sum P(4) = 6.1e-10
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 282 HQFNPKSKVESLIAGPCTFGAITNFGHLY 310
H + V+ L+ G ++ + N H+Y
Sbjct: 1350 HNYKNVKNVKQLMYGKMSYNSNKNTTHIY 1378
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 43/151 (28%), Positives = 78/151 (51%)
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL 183
G + CG H+ +T++G + + GWG GQ G G +++ +P V + G RI ++
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCV-SSLLGIRIEEV 368
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLS--QCKGVSRIVDVASGGS 240
++ + S GDV+ +G +++GQ+ Q T P++L + V+ + ++ G
Sbjct: 369 AAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN-VKTISCGAR 427
Query: 241 ACTMLNDEGLVYSWG---YGLLGQGPKVSRS 268
++ DEG V+ WG YG LG G + R+
Sbjct: 428 HTAVITDEGRVFCWGWNKYGQLGIGDVIDRN 458
Score = 179 (68.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 45/142 (31%), Positives = 68/142 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
+K +A G H+ VITD TFG +GQCG+G +E C ++ L G +I +
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPT---C--VSSLLGIRIEE 367
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG-EIEGERIVKLSSAVD 188
G HT + G VY+ G GQ G G + P L+ +E + +S
Sbjct: 368 VAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGAR 427
Query: 189 CVLAVSDKGDVFGWGNSEYGQI 210
++D+G VF WG ++YGQ+
Sbjct: 428 HTAVITDEGRVFCWGWNKYGQL 449
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDV--FGWGNSEYGQISESEMQIS-TPRVLSQCKGV 229
G + G + K++ ++D G + FGWG YGQ + +P +S G+
Sbjct: 306 GRVLGSYVKKIACGGRHSAVITDTGALLTFGWGL--YGQCGQGSTDDELSPTCVSSLLGI 363
Query: 230 SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
RI +VA+G T + +G VY++G +G LG G + ++ P L+ + N
Sbjct: 364 -RIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETL-PKLLEAP--NLENVN- 418
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
V+++ G IT+ G ++ WG N+YGQLG+G V D+ P +V +
Sbjct: 419 ---VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRI 465
Score = 151 (58.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+I+ +A G HT + + + FG N FGQ G G Q E N LE +
Sbjct: 364 RIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPN---LENVNVK 420
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
CG HT +T+ G+V+ GW GQ G+G + ++ P VR
Sbjct: 421 TISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR 464
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 167 (63.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 59/203 (29%), Positives = 90/203 (44%)
Query: 57 VRIPLPVKHPSTQ---IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGK 113
V +P +K S + IK +A G H+ VIT F G+N GQ G + ED
Sbjct: 36 VLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLG--LNHTEDV--- 90
Query: 114 WFCHNIAD-LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
C + L G + + CG D T+ L +G V SCG A GQ G+ ++ PCL+
Sbjct: 91 -LCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISG---PCLIP 146
Query: 173 GEIEG---ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTP---RVLSQC 226
+I+ E+ V +++ + LA ++ G VF WG + + P C
Sbjct: 147 QKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPC 206
Query: 227 --KGVS--RIVDVASGGSACTML 245
KG+ ++ VA+G C L
Sbjct: 207 EIKGLEDVKVKRVAAGSYHCVSL 229
Score = 144 (55.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWG 152
G NS+GQ G G +ED +++ + + I G H+ +T +G+++ CG
Sbjct: 21 GANSYGQLGLG--HKEDVLVPQLLKDVS-CKCQDIKSIAGGGGHSAVITGAGELFVCGHN 77
Query: 153 ADGQTGLGHLNNQETPCLVR-GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
GQ GL H ++ C + G + +++ D + + G V G++ +GQ+
Sbjct: 78 KAGQLGLNH--TEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLG 135
Query: 212 ESEMQISTPRVLSQCKGVS---RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKV 265
QIS P ++ Q S + V +A+G + GLV+ WG G+ + +V
Sbjct: 136 VP--QISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRV 190
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 174 (66.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%)
Query: 71 KHLATG--RAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
+++A+G AHTI+I + A FG N GQ G + Q+ K I LE I+
Sbjct: 117 RYVASGPSAAHTILINMDRKALGFGRNPSGQLG--LSQDIKLAEKPTI--IPALEQLNIV 172
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN-NQETPCLVRGEIEGERIVKLSSAV 187
A G+ HTLFLT++G VY+CG GQ G+G+ + N +P + G I+++
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN--YRGPPIIRIGCGA 230
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISES 213
+ + + KG + +G EYGQ+ +
Sbjct: 231 EFSVILDIKGSLHTFGLPEYGQLGHN 256
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 42/165 (25%), Positives = 79/165 (47%)
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR---GE 174
++ ++G +I+D CG +HT+ + +VYS G+G G+ G ++ P L++ +
Sbjct: 290 HVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQ 349
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVD 234
G R V S L V++ G +F +G ++ + E+ M P+ + G + I D
Sbjct: 350 GRGGRSVFCGSTFS--LIVNELGLLFLFGQNK--KTGEANMY---PKPVQDLSGWN-ITD 401
Query: 235 VASGGSACTMLNDEGLVYSWG----YGLLGQGPKVSRSMKPTLIP 275
+ ++ + D+ L+ +WG +G LG G S P +P
Sbjct: 402 IGCANTSIMISADDTLI-AWGASPTFGELGIGEFQKSSTVPKEVP 445
Score = 49 (22.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
AI + +Y WG +G+LG +D+ P
Sbjct: 311 AIDSKKRVYSWGFGGFGRLGHAEPKDEMVP 340
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 66/260 (25%), Positives = 116/260 (44%)
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
G+ + +++TD ++ G S+G+ G ++ D I +L ++I CG
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHK--KKRDVL---IPTQILELSNKRIKSIACGTH 256
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVR--GEIEGERIVK-LSSAVDCVL 191
H+L + + G+VYS G GA G+ GLG+ + TP L+ I +++ D +
Sbjct: 257 HSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSM 316
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQ-----ISTPRVLSQCKGVSRIVDVASGGSACTMLN 246
+ GDV+ +G++ + ++ E STP+ + + ++ +A L+
Sbjct: 317 ILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPS---ILQMKSIACASWHSVFLD 373
Query: 247 DEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAI 303
+G VY+ G G LG+ S P + T + P+ +V IA F +
Sbjct: 374 LKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTV 433
Query: 304 -TNFGHLYMWGKNQYGQLGL 322
+ G LY WG N QLGL
Sbjct: 434 LSESGSLYSWGVNTKSQLGL 453
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 62 PVKHPST-QIKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P K PS Q+K +A H++ + D +G +T G+++ G+ GR I + +
Sbjct: 350 PKKIPSILQMKSIACASWHSVFL-DLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITN 408
Query: 120 ADLEG-----EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN------NQETP 168
+ G E I CG + T L+ESG +YS WG + ++ LG +N P
Sbjct: 409 SKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYS--WGVNTKSQLGLINLVGISEYYSQP 466
Query: 169 CLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSE-----YGQISESEMQISTPRVL 223
LV + I + V+A+SD+G+VF +G++ +G++ E+ ++ ++
Sbjct: 467 KLVTA-LNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEINLTKVKIE 525
Query: 224 SQCK-----GVSRIVDVASGGSACTMLN 246
+ G + V++GGS TM++
Sbjct: 526 TTSSDAPIIGGGGVFKVSAGGSN-TMIS 552
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 74/293 (25%), Positives = 125/293 (42%)
Query: 57 VRIPLPVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ---G 112
V IP + S + IK +A G H++ + D +++GN + G+ G G D+
Sbjct: 234 VLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLG----NDFSIVPT 289
Query: 113 KWFCHNIADLEGEKIMDAVC-GQDHTLFLTESGKVYSCGWGADGQTGL----GHLNNQET 167
I +I A+ G D+++ L +G VYS G + G G L Q T
Sbjct: 290 PTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQST 349
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST--P-RVL- 223
P + ++ + I +S L + KG V+ G+S G++ + S+ P RV
Sbjct: 350 PKKIPSILQMKSIA-CASWHSVFLDL--KGRVYTCGSSTNGRLGRAISSYSSFYPERVSI 406
Query: 224 --SQCKGV----SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIP-S 276
S+ G I +A G + T+L++ G +YSWG Q ++ L+ S
Sbjct: 407 TNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLIN------LVGIS 460
Query: 277 TLFGQHQF----NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+ Q + NP + + S G A+++ G ++ +G N Q G G V
Sbjct: 461 EYYSQPKLVTALNPYT-IHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEV 512
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 69/275 (25%), Positives = 119/275 (43%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 333 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSR 392
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G LN+ P +V + G
Sbjct: 393 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL-G 451
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVA 236
+V+++ VLA+S + ++F WG + G++ + S P+ +S G V
Sbjct: 452 YEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPG-QEAQRVV 510
Query: 237 SGGSACTMLNDEGLVYSWG------YGL----LGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
G + +L G + G GL LG+ P ++ ++ L T G F+
Sbjct: 511 CGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEAL-SFTPLGSAPFD- 568
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+ + S+ G A+T G Y +G NQ+GQLG
Sbjct: 569 REPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLG 603
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 71/277 (25%), Positives = 119/277 (42%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +ACG FT T D+ + + FG G S+ LG+ P +V + +
Sbjct: 400 VTIKHVACGDLFTACLT---DRGIIMTFGSG--SNGCLGHGSLNDISQPT-IVEALL--- 450
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HNI 119
++ +A G +H + ++ F +G G+ G G E + C +
Sbjct: 451 ------GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGT--RESHS----CPQQV 498
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G++ VCG D ++ LT G+ +CG + GL L+ E P + E
Sbjct: 499 SMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALS 558
Query: 180 IVKLSSA---------VDC----VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC 226
L SA VD AV+ GD + +G++++GQ+ + ++S R Q
Sbjct: 559 FTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVS--RAPCQV 616
Query: 227 KGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ +I VA G + + EG VYSWG G G+
Sbjct: 617 QGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGR 653
Score = 135 (52.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 64/280 (22%), Positives = 106/280 (37%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN--DISQPTI---VEALLGYEMVQ 456
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG H L L+ ++++ G G G+ GLG + P V G+ ++ +D
Sbjct: 457 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMP-PGQEAQRVVCGIDS 515
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVASG---------- 238
+ ++ G G++ + ++ + + P Q + + S
Sbjct: 516 SMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSV 575
Query: 239 --GSA-CTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G+A + G Y++G GQ G R + P + G K+ +
Sbjct: 576 DLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRA---PCQVQGLQNI----KIAMVA 628
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G A+ G +Y WGK G+LG ED P V
Sbjct: 629 CGDAFTVAVGAEGEVYSWGKGARGRLGRRD-EDAGLPRPV 667
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 48/228 (21%), Positives = 89/228 (39%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG + + ++ LF G +LG P ++ M P
Sbjct: 453 EMVQVACGASHVLALSTERE----LFAWGRGDGGRLGLGTRESHSCPQQVSM-------P 501
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQEEDYQGKWFCHNI- 119
P + + + G ++++T A G+N F + G R + EE + +
Sbjct: 502 ---PGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALS 558
Query: 120 ------ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
A + E ++ G H+ +T SG Y+ G GQ G PC V+G
Sbjct: 559 FTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG 618
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
++ +I ++ +AV +G+V+ WG G++ + PR
Sbjct: 619 -LQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPR 665
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 181 (68.8 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 71/288 (24%), Positives = 120/288 (41%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISR 383
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G L + P +V + G
Sbjct: 384 FLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALL-G 442
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVA 236
+V+++ VLA+S + ++F WG + G++ + S P+ + G V
Sbjct: 443 YEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPG-QEAQRVV 501
Query: 237 SGGSACTMLNDEGLVYSWG------YGL----LGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
G + +L G + G GL LG+ P + ++ L TL G +
Sbjct: 502 CGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEAL-SFTLLGSAPLDQ 560
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + S+ G A+T G Y +G NQ+GQLG T P KV
Sbjct: 561 EPLL-SIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKV 607
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/276 (23%), Positives = 119/276 (43%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +ACG FT T D+ + + FG G S+ LG+ G+ ++ + +
Sbjct: 391 VTIKHVACGDFFTACLT---DRGIIMTFGSG--SNGCLGH------GSLTDISQPTI-VE 438
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
+ + Q+ A G +H + ++ F +G G+ G G E + C
Sbjct: 439 ALLGYEMVQV---ACGASHVLALSTERELFAWGRGDSGRLGLGT--RESHS----CPQQV 489
Query: 121 DLE-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC---------- 169
+ G++ VCG D ++ LT G+ +CG + GL HL+ E P
Sbjct: 490 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALS 549
Query: 170 ---LVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQ 225
L ++ E ++ + AV+ GD + +G++++GQ+ + + S P +
Sbjct: 550 FTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG 609
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ ++ VA G + + E VYSWG G G+
Sbjct: 610 LEGI-KMAMVACGDAFTVAIGAESEVYSWGKGARGR 644
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 48/228 (21%), Positives = 91/228 (39%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG + + ++ LF G +LG P + +P+P
Sbjct: 444 EMVQVACGASHVLALSTERE----LFAWGRGDSGRLGLGTRESHSCPQQ-------VPMP 492
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ--EED--YQG-----K 113
P + + + G ++++T A G+N F + G + EE +Q
Sbjct: 493 ---PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALS 549
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ A L+ E ++ G H+ +T SG Y+ G GQ G PC V+G
Sbjct: 550 FTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG 609
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
+EG ++ ++ +A+ + +V+ WG G++ + PR
Sbjct: 610 -LEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPR 656
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 69/279 (24%), Positives = 109/279 (39%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLT--DISQPTI---VEALLGYEMVQ 447
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG----HLNNQETPCLVRGEIEGERIVKLSS 185
CG H L L+ ++++ G G G+ GLG H Q+ P + G+ E +R+V
Sbjct: 448 VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVP-MPPGQ-EAQRVV---C 502
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-- 243
+D + ++ G G++ + ++ + + V Q V + GSA
Sbjct: 503 GIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQ--QVEEALSFTLLGSAPLDQ 560
Query: 244 --MLN-DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH-----QFNPKSKVESLIA 295
+L+ D G +S G + L +T G Q K+ +
Sbjct: 561 EPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVAC 620
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G AI +Y WGK G+LG ED P V
Sbjct: 621 GDAFTVAIGAESEVYSWGKGARGRLGRRD-EDAGLPRPV 658
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 181 (68.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 71/276 (25%), Positives = 120/276 (43%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +ACG FT T D+ + + FG G S+ LG+ P +V + +
Sbjct: 397 VTIKHVACGDLFTACLT---DRGIIMTFGSG--SNGCLGHGGLNDISQPT-IVEALL--- 447
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G +H + ++ F +G G+ G G E + C
Sbjct: 448 ------GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGT--RESHS----CPQQV 495
Query: 121 DLE-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G++ +CG D ++ LT G+ +CG + GL HL+ E P L + E
Sbjct: 496 PMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALN 555
Query: 180 IVKLSSA---------VDC----VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQ 225
L SA VD AV+ GD + +G++++GQ+ + ++S P +
Sbjct: 556 FTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG 615
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ +I VA G + + EG VYSWG G G+
Sbjct: 616 LQGI-KIAMVACGDAFTVAIGAEGEVYSWGKGARGR 650
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 67/275 (24%), Positives = 117/275 (42%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSR 389
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G LN+ P +V + G
Sbjct: 390 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALL-G 448
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRVLSQCKGVSRIVDVA 236
+V+++ VLA+S + ++F WG + G++ + S P+ + G V
Sbjct: 449 YEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPG-QEAQRVI 507
Query: 237 SGGSACTMLNDEGLVYSWG------YGL----LGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
G + +L G + G GL LG+ P + + ++ L T G +
Sbjct: 508 CGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEAL-NFTPLGSAPLDQ 566
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
+ + S+ G A+T G Y +G NQ+GQLG
Sbjct: 567 EPLL-SVDLGTAHSAAVTASGDCYTFGSNQHGQLG 600
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/228 (21%), Positives = 93/228 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG + + ++ LF G +LG P + +P+P
Sbjct: 450 EMVQVACGASHVLALSTERE----LFAWGRGDGGRLGLGTRESHSCPQQ-------VPMP 498
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ--EED--YQGKWFCHN 118
P + + + G ++++T A G+N F + G + EE +Q N
Sbjct: 499 ---PGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALN 555
Query: 119 I-----ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
A L+ E ++ G H+ +T SG Y+ G GQ G PC V+G
Sbjct: 556 FTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG 615
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
++G +I ++ +A+ +G+V+ WG G++ + + PR
Sbjct: 616 -LQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPR 662
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 68/283 (24%), Positives = 115/283 (40%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLN--DISQPTI---VEALLGYEMVQ 453
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG----HLNNQETPCLVRGEIEGERIVKLSS 185
CG H L L+ ++++ G G G+ GLG H Q+ P + G+ E +R++
Sbjct: 454 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVP-MPPGQ-EAQRVI---C 508
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT-- 243
+D + ++ G G++ + ++ + + L Q V ++ GSA
Sbjct: 509 GIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQ--QVEEALNFTPLGSAPLDQ 566
Query: 244 --MLN-DEGLVYS---------WGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVE 291
+L+ D G +S + +G G + + + + P + G K+
Sbjct: 567 EPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGI----KIA 622
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ G AI G +Y WGK G+LG ED P V
Sbjct: 623 MVACGDAFTVAIGAEGEVYSWGKGARGRLGRRD-EDAALPRPV 664
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 176 (67.0 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 77/272 (28%), Positives = 124/272 (45%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S Q+ H R+H+ T+ T G GQ G G E + K + + E
Sbjct: 39 SCQVSH----RSHS---TEPGLVLTLGQGDVGQLGLG---ENVMERKKPA--LVSIP-ED 85
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKLSS 185
++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++S+
Sbjct: 86 VVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQVSA 143
Query: 186 AVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
A++D G VF WG+ G I E + V Q + +V VASG
Sbjct: 144 GDSHTAALTDDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDVPVVKVASGNDHLV 202
Query: 244 MLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPKSKVESL 293
ML +G +Y+ G G LG+ P++ + ++ L+P + + +
Sbjct: 203 MLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDA 262
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
G AI++ GH+Y +G + Y QLG GT
Sbjct: 263 FCGAYFTFAISHEGHVYGFGLSNYHQLGTPGT 294
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 71/294 (24%), Positives = 128/294 (43%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V P ++ A G HT+ ++ + ++FG N G GR + +G
Sbjct: 77 PALVSIPEDVVQAEAGGM-HTVCLSKSGQVYSFGCNDEGALGR----DTSVEGSEMVPGK 131
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGE 178
+L+ EK++ G HT LT+ G+V+ G D +G L + + V+ +++
Sbjct: 132 VELQ-EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP 190
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEM-----------QISTPR-VLSQ 225
+VK++S D ++ ++ GD++ G E GQ+ E+ ++ P+ V+ +
Sbjct: 191 -VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLK 249
Query: 226 CKGVS---RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
+G R D G ++ EG VY G+GL + + IP L
Sbjct: 250 SRGSRGHVRFQDAFCGAYFTFAISHEGHVY--GFGLSNYHQLGTPGTESCFIPQNLTS-F 306
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKVA 335
+ + KS V G + + G Y G+ +YG+LGLG E++ P ++
Sbjct: 307 KNSTKSWV-GFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 359
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 63/245 (25%), Positives = 99/245 (40%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
SK + FGC N + LG D +G+ E+V V + ++ ++ G +H
Sbjct: 100 SKSGQVYSFGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSH 147
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
T +TD+ F +G SF G++ + K L+ ++ G DH +
Sbjct: 148 TAALTDDGRVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLD-VPVVKVASGNDHLVM 203
Query: 140 LTESGKVYSCGWGADGQTGL---------GH--LNNQETPCLVRGEIEGER-IVKLSSAV 187
LT G +Y+ G G GQ G G L P V + G R V+ A
Sbjct: 204 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 263
Query: 188 DC----VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
C A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG
Sbjct: 264 -CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHH 322
Query: 243 TMLND 247
T+ D
Sbjct: 323 TVCMD 327
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 172 (65.6 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E ++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 67 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A++D G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDVPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML +G +Y+ G G LG+ P++ + ++ L+P + + +
Sbjct: 184 LVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
G AI++ GH+Y +G + Y QLG GT
Sbjct: 244 DAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGT 277
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 54/189 (28%), Positives = 85/189 (44%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG ++ ++ P LV I E +V+ + + +S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV--SIP-EDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L D+G V+ W
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMW 312
G G + MK +++P Q Q + P KV S G +T G LY
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLDVPVVKVAS---GNDHLVMLTADGDLYTL 196
Query: 313 GKNQYGQLG 321
G + GQLG
Sbjct: 197 GCGEQGQLG 205
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V P ++ A G HT+ ++ + ++FG N G GR + +G
Sbjct: 60 PALVSIPEDVVQAEAGGM-HTVCLSKSGQVYSFGCNDEGALGR----DTSVEGSEMVPGK 114
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGE 178
+L+ EK++ G HT LT+ G+V+ G D +G L + + V+ +++
Sbjct: 115 VELQ-EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP 173
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+VK++S D ++ ++ GD++ G E GQ+
Sbjct: 174 -VVKVASGNDHLVMLTADGDLYTLGCGEQGQL 204
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 178 (67.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 65/275 (23%), Positives = 118/275 (42%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHD--PRKKGNPLELVMS-FVRIP 60
I I GY ++V TK ++G G N +QLG + K +P + P
Sbjct: 178 IISIVSGYEHSLVVTKDDG----IYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKP 233
Query: 61 LPVKHPSTQI----KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV---QEEDYQGK 113
+ V + I K + +G H +++ ++ +++GN FG G G+ +E Y K
Sbjct: 234 IKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPK 293
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN--NQETPCLV 171
+ +I+D CG H++FLT ++Y+ G+G GQ G G + N P +
Sbjct: 294 KITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRI 353
Query: 172 R--GEIEGERIVKLSSAVDCVLA--VSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQC 226
+ G+ +K A D + ++ G V+ WG ++ G + + +P+ +
Sbjct: 354 KSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSL 413
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+ +I A ++ ND +Y +G GQ
Sbjct: 414 SNIKKITSGFKHTLAQSINND---IYVFGDNTFGQ 445
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 49/162 (30%), Positives = 74/162 (45%)
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQI-----SESEMQISTPRVLSQC---KGVSRIV 233
K+ S D L + + G ++ WGN +G + S + I TP+ ++ SRIV
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIV 308
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
D+A GG L ++ +Y++GYG GQ IP + +K++S+
Sbjct: 309 DIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSI 368
Query: 294 IAGP-CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
AG IT G +Y WG N G LG GT E+ P K+
Sbjct: 369 FAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI 410
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 53/211 (25%), Positives = 89/211 (42%)
Query: 131 VC-GQDHTLFLTESGKVYSCGWGADGQTGLG-HLNNQE---TPCLVRG---EIEGERIVK 182
+C G DH L L G +YS G G G G G N++E TP + RIV
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVD 309
Query: 183 LSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGV------SRIVDVA 236
++ + +++ +++ +G E+GQ+ E + + K ++I +
Sbjct: 310 IACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIF 369
Query: 237 SGGSACTM-LNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+G A + + +G VYSWG+ G LG G + P I S S ++
Sbjct: 370 AGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENH-YSPKKIQSL----------SNIKK 418
Query: 293 LIAG-PCTFGAITNFGHLYMWGKNQYGQLGL 322
+ +G T N +Y++G N +GQ L
Sbjct: 419 ITSGFKHTLAQSIN-NDIYVFGDNTFGQTAL 448
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 124 (48.7 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+V+S G G DGQ G G L + P V+ + G+ ++K+++ LA++ + VF WG
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKS-LNGKEVLKVAAGAHHSLALTAQSQVFSWGC 608
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
+ GQ+ E + P++ G+ R+ D+ +G +L D
Sbjct: 609 NTSGQLGHMESPTTFPQLTKLSDGI-RVWDIGAGLQHTLLLAD 650
Score = 110 (43.8 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGR---GIVQEEDYQGKWFCHNIADLEGE 125
++ +A G AH+ V+T++ G +G N GQCG ++ G +
Sbjct: 87 RVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGV-LDSEATPPQTV 145
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
KI++ CG HTL L+ +V++ WG+ Q GL
Sbjct: 146 KILEVACGDQHTLALSAKHEVWA--WGSGCQLGL 177
Score = 84 (34.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 162 LNNQETPCLVRGEIEGE-RIVKLSSA----VDCVLAVSDKGDVFGWGNSEYGQISESEMQ 216
L +Q +P L+R R V L+S D L S + +V+ WG + GQ+ ++
Sbjct: 510 LLSQVSPRLLRRTSRPRMRAVPLASGGIPETDAHLP-SLQTEVWSWGQGQDGQLGHGDL- 567
Query: 217 ISTPRVLSQC-KGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTL 273
PR+ C K ++ ++ VA+G L + V+SWG GQ + PT
Sbjct: 568 --LPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQ---LGHMESPTT 622
Query: 274 IP 275
P
Sbjct: 623 FP 624
Score = 81 (33.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 216 QISTPRVLSQC-KGVSRIVDVASGGSACTMLNDEGL---VYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + + R V +ASGG T + L V+SWG G LG G + R
Sbjct: 513 QVS-PRLLRRTSRPRMRAVPLASGGIPETDAHLPSLQTEVWSWGQGQDGQLGHGDLLPR- 570
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + S N K +V + AG A+T ++ WG N GQLG
Sbjct: 571 LQPDCVKS-------LNGK-EVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLG 615
Score = 58 (25.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 66 PST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
P T +I +A G HT+ ++ + +G+ C G+ + W + L G
Sbjct: 142 PQTVKILEVACGDQHTLALSAKHEVWAWGSG----CQLGL-NTSTFP-VWKPQKVDHLSG 195
Query: 125 EKIMDAVCGQDHTLFL 140
++ CG H++ L
Sbjct: 196 RHVLQVACGSAHSVAL 211
Score = 45 (20.9 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 26/76 (34%), Positives = 32/76 (42%)
Query: 255 GYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYM--W 312
G+G+L G S S PS GQ Q++ KS G F IT G YM W
Sbjct: 1164 GHGMLRSGKLNSTS------PSVFIGQWQYDKKS-------GYGVFDDITR-GEKYMGMW 1209
Query: 313 GKNQYGQLGLGTVEDQ 328
+Q + G G V Q
Sbjct: 1210 LDDQ--RQGNGVVVTQ 1223
Score = 41 (19.5 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGC--GLNSDS 36
+KI ++ACG T+ + + GC GLN+ +
Sbjct: 145 VKILEVACGDQHTLALSAKHEVWAWGSGCQLGLNTST 181
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 144 (55.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 49/165 (29%), Positives = 78/165 (47%)
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVL-- 223
++P L+ E +I+ L++ +A++ G V+ WG +G++ + VL
Sbjct: 4 KSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVE 63
Query: 224 --SQCKGVS-RIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLF 279
+Q +G RIV VA+G ++D+G V+ WGY + GQ G S+ P LI + LF
Sbjct: 64 FPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKN-LF 122
Query: 280 GQH----QFNPKS-------KVESLIAGPCTFGAITNFGHLYMWG 313
+ N KV ++ AG AI N G L+MWG
Sbjct: 123 ERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG 167
Score = 138 (53.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 65/209 (31%), Positives = 94/209 (44%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT---ESGKV 146
+++GNN GQ G G E G + D CG HT LT E+ K
Sbjct: 230 YSWGNNHHGQLGLG--DGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKG 287
Query: 147 YS-C---GWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVF 200
S C G+G +GQ LGH +N+ + P V E +V + + VS +G V+
Sbjct: 288 PSICWTFGFGENGQ--LGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVW 345
Query: 201 GWGNSEYG-----QISESEMQI---STPRVLSQCKGVSRI---VDVASGGSACTMLNDEG 249
WG E G ++ +E++ S PR +S G SR V V+ G + ++ D G
Sbjct: 346 SWG-MERGLGLCPDVNFTEVEAGDDSVPRKISG--GSSRFRDPVQVSCGAAHTVLVVDGG 402
Query: 250 L-VYSWGYG---LLGQGPKVSRSMKPTLI 274
++SWG G +LG G VS PTL+
Sbjct: 403 YKLWSWGRGRNGVLGTG-NVSDCYVPTLV 430
Score = 130 (50.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
S +I LA G AHTI +T + +++G FG+ G G +E N A+ + +
Sbjct: 15 SRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIR 74
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
I+ G H+L +++ G V+ G+ GQ G N PCL++ E E
Sbjct: 75 IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDG-ENSLAPCLIKNLFERE 125
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 215 MQISTPRVLSQCKGVSR-IVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GP-KVSRSMKP 271
M+ +P +L + +SR I+ +A+G + L +G VYSWG G+ G+ G K S + P
Sbjct: 1 MEDKSPTLLIS-EDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVP 59
Query: 272 TLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
L+ F + ++ + AG A+++ G ++ WG N YGQLG
Sbjct: 60 VLVE---FPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLG 106
Score = 104 (41.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 53/205 (25%), Positives = 83/205 (40%)
Query: 146 VYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAVD--CVLAV---SDKGD 198
+YS G GQ GLG ++ P V + G + ++ +L + KG
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 199 VFGW--GNSEYGQISE-SEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWG 255
W G E GQ+ S S P +S + +V V G ++++ EG V+SWG
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Query: 256 YGL-LGQGPKVSRSMKPT---LIPSTLFG-QHQFNPKSKVESLIAGPCTFGAITNFGH-L 309
LG P V+ + +P + G +F +V G + + G+ L
Sbjct: 349 MERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVS---CGAAHTVLVVDGGYKL 405
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG+ + G LG G V D P V
Sbjct: 406 WSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 92 (37.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 39/179 (21%), Positives = 75/179 (41%)
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDV-----------FGWGNSEYGQIS----ESEMQIS 218
+ G ++K++ + V+A+ GD+ + WGN+ +GQ+ ES +
Sbjct: 193 DFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQ 252
Query: 219 TPRVLSQCKGVSRIVDVASGGSACTMLN-----DEGLVYSWGYGLLGQGPKVSRSMKPTL 273
T +Q G++ + D+A G +L +G W +G G RS K +
Sbjct: 253 TVETFNQKSGLT-VYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSS 311
Query: 274 IPSTL--FGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPF 330
+P + +H + + S+ G +++ G+++ WG + GLG D F
Sbjct: 312 LPEPVSDLPEHAY-----LVSVDCGLFHTSVVSSEGYVWSWGMER----GLGLCPDVNF 361
Score = 81 (33.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 231 RIVDVASGGSACTMLNDEGLVYSWGYGLLGQG----PKVSRSMKPTLIPSTLF-GQHQFN 285
++ V +G +++ G ++ WG + Q P++S + P P F G+
Sbjct: 143 KVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLK 201
Query: 286 PKSKVESLIA--GPCTFGAITNF--GHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQK 340
E ++A GP ++ LY WG N +GQLGLG E + P V QK
Sbjct: 202 VACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQK 260
Score = 72 (30.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
KI +A G T+ T D + +G G+ +LG K+ + ELV V P
Sbjct: 17 KIISLAAGEAHTIALTG--DGCVYSWGRGMFG--RLG---TGKESD--ELVPVLVEFPNQ 67
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
+ +I +A G H++ ++D+ + +G N +GQ G
Sbjct: 68 AEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLG 106
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 71/276 (25%), Positives = 126/276 (45%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +ACG FT T D+ + + FG G S+ LG+ G+ ++ + +
Sbjct: 397 VTIKHVACGDLFTACLT---DRGIIMTFGSG--SNGCLGH------GSLTDISQPTI-VE 444
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-HNI 119
+ + Q+ A G +H + ++ + F +G G+ G G + + C +
Sbjct: 445 ALLGYEMVQV---ACGASHVLALSADGELFAWGRGDGGRLGLGTRESHN------CPQQV 495
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G++ VCG D ++ LT G+V +CG + GL L+ +E P + E
Sbjct: 496 PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALS 555
Query: 180 IVKLSSA-VD-----CV-------LAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQ 225
L SA +D CV AV+ G + +G++++GQ+ S ++S P +
Sbjct: 556 FTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQG 615
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ ++V VA G + + EG VYSWG G G+
Sbjct: 616 LEGI-KMVMVACGDAFTVAIGAEGEVYSWGKGARGR 650
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 74/303 (24%), Positives = 127/303 (41%)
Query: 49 PLELVMSF---VRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIV 105
PL V ++ + IPL + P+T++ +A GR +T + + G G ++
Sbjct: 316 PLSSVYAWGGGLSIPLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLL 375
Query: 106 QE--EDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLN 163
E Q ++ + G I CG T LT+ G + + G G++G G G L
Sbjct: 376 PGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLT 435
Query: 164 NQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI-STPRV 222
+ P +V + G +V+++ VLA+S G++F WG + G++ + + P+
Sbjct: 436 DISQPTIVEALL-GYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQ 494
Query: 223 LSQCKG--VSRIVDVASGGSACTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF 279
+ G R+V G C+M L G V + G + S++ +P
Sbjct: 495 VPMVPGQEAQRVVC----GIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQV 550
Query: 280 GQH-QFNPKSKV----ESLIA---GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFP 331
+ F P E+L+ G A+T G Y +G NQ+GQLG + P
Sbjct: 551 EEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAP 610
Query: 332 LKV 334
+V
Sbjct: 611 CRV 613
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 77/285 (27%), Positives = 120/285 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLT--DISQPTI---VEALLGYEMVQ 453
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLG----HLNNQETPCLVRGEIEGERIVKLSS 185
CG H L L+ G++++ G G G+ GLG H Q+ P +V G+ E +R+V
Sbjct: 454 VACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVP-MVPGQ-EAQRVV---C 508
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS------ESE----MQIS-----TPRVLSQCKGVS 230
+DC + ++ G V G++ + ++ E E Q+ TP + +
Sbjct: 509 GIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRET 568
Query: 231 RI-VDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+ VD+ + SA + G Y++G GQ SR + P + G K
Sbjct: 569 LLCVDLGTAHSAAVTAS--GACYTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGI----K 620
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + G AI G +Y WGK G+LG ED P V
Sbjct: 621 MVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRD-EDAGLPRPV 664
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 51/228 (22%), Positives = 92/228 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG V S D +LF G +LG P + +P+
Sbjct: 450 EMVQVACGASH--VLALSADG--ELFAWGRGDGGRLGLGTRESHNCPQQ-------VPMV 498
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ-EED---YQG-----K 113
P + + + G ++++T G+N F + G + EE+ +Q
Sbjct: 499 ---PGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALS 555
Query: 114 WFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
+ A L+ E ++ G H+ +T SG Y+ G GQ G PC V+G
Sbjct: 556 FTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQG 615
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
+EG ++V ++ +A+ +G+V+ WG G++ + PR
Sbjct: 616 -LEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPR 662
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 90/328 (27%), Positives = 136/328 (41%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
FGC N + LG D +G+ E+V V + ++ ++ G +HT +T++
Sbjct: 91 FGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSHTAALTEDG 138
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
F +G SF G++ + K L+ + ++ G DH + LT G +Y
Sbjct: 139 RVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLDTQ-VVKVASGNDHLVMLTTDGDLY 194
Query: 148 SCGWGADGQTGL--------GHLNNQE---TPCLVRGEIEGER-IVKLSSAVDC----VL 191
+ G G GQ G G E P V + G R V+ A C
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAF-CGAYFTF 253
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND-EG 249
A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG T+ D EG
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 313
Query: 250 LVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
YS G YG LG G PTLI S L P V S+ G A++
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLI-SRL-------PV--VSSVACGASVGYAVSKD 363
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G ++ WG QLG G +D P+++
Sbjct: 364 GRVFAWGMGTNYQLGTGQEDDAWSPVEM 391
Score = 168 (64.2 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 73/293 (24%), Positives = 126/293 (43%)
Query: 62 PVKHPSTQ-IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
P P Q + G HT+ ++ + ++FG N G GR + +G
Sbjct: 60 PALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGR----DTSVEGSEMVPGKV 115
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGER 179
+L+ EK++ G HT LTE G+V+ G D +G L + + V+ +++ +
Sbjct: 116 ELQ-EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQ- 173
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISE-SEM-----------QISTPR-VLSQC 226
+VK++S D ++ ++ GD++ G E GQ+ E+ ++ PR VL +
Sbjct: 174 VVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKS 233
Query: 227 KGVS---RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
+G R D G ++ EG VY G+GL + IP L +
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVY--GFGLSNYHQLGTPGTGSCFIPQNLTS-FK 290
Query: 284 FNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT-VEDQPFPLKVA 335
+ KS V G + + G Y G+ +YG+LGLG E++ P ++
Sbjct: 291 NSTKSWV-GFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS 342
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 66/277 (23%), Positives = 112/277 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G T T+ D + L+G +++ +G +P KK +P+
Sbjct: 120 KVVQVSAGDSHTAALTE--DGRVFLWGSFRDNNGVIGLLEPMKKS----------MVPVQ 167
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG---IVQEEDYQG--KWFCH 117
V+ TQ+ +A+G H +++T + +T G GQ GR QG +
Sbjct: 168 VQL-DTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 118 NIADLEGE------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-L 170
L+ + DA CG T ++ G VY G Q G + P L
Sbjct: 227 RCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNL 286
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKG 228
+ + V S + + +G + G +EYG++ E + S P ++S+
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV 346
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQG 262
VS VA G S ++ +G V++WG G LG G
Sbjct: 347 VS---SVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/188 (25%), Positives = 84/188 (44%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG + ++ P LV + +V+ + + +S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLL---QDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L ++G V+ W
Sbjct: 84 QSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G G + MK +++P Q Q + ++V + +G +T G LY G
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLD--TQVVKVASGNDHLVMLTTDGDLYTLG 197
Query: 314 KNQYGQLG 321
+ GQLG
Sbjct: 198 CGEQGQLG 205
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 78/278 (28%), Positives = 126/278 (45%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
LP K ++ H R+H+ T+ T G GQ G G E + K +
Sbjct: 17 LP-KSKKVKVSH----RSHS---TEPGLVLTLGQGDVGQLGLG---ENVMERKKPA--LV 63
Query: 121 DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GER 179
+ E I+ A G HT+ L++SG+VYS G +G LG + E +V G++E E+
Sbjct: 64 PIP-EDIVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEK 120
Query: 180 IVKLSSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVAS 237
+V++S+ A+++ G VF WG+ G I E + V Q + +V VAS
Sbjct: 121 VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLSMPVVKVAS 179
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPK 287
G ML +G +Y+ G G LG+ P++ + ++ L+P +
Sbjct: 180 GNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH 239
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
+ + G AI++ GH+Y +G + Y QLG GT
Sbjct: 240 VRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGT 277
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 68/277 (24%), Positives = 116/277 (41%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G T T+ D + L+G +++ +G +P KK +V V++ +P
Sbjct: 120 KVVQVSAGDSHTAALTE--DGRVFLWGSFRDNNGVIGLLEPMKKS----MVPVQVQLSMP 173
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG---IVQEEDYQG--KWFCH 117
V +K +A+G H +++T + +T G+ GQ GR QG +
Sbjct: 174 V------VK-VASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 118 NIADLEGE------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-L 170
L+ + DA CG T ++ G VY G Q G + P L
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNL 286
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKG 228
+ + V+ S + + +G + G +EYG++ E + S P ++S+
Sbjct: 287 TSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPA 346
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQG 262
VS + AS G A T +G V++WG G LG G
Sbjct: 347 VSSVACGASVGYAVTK---DGRVFAWGMGTNYQLGTG 380
Score = 141 (54.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 83/333 (24%), Positives = 133/333 (39%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
SK + FGC N + LG D +G+ E+V V + ++ ++ G +H
Sbjct: 83 SKSGQVYSFGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSH 130
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
T +T++ F +G SF G++ + K L ++ G DH +
Sbjct: 131 TAALTEDGRVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLS-MPVVKVASGNDHLVM 186
Query: 140 LTESGKVYSCGWGADGQTGL---------GH--LNNQETPCLVRGEIEGER-IVKLSSAV 187
LT G++Y+ G G GQ G G L P V + G R V+ A
Sbjct: 187 LTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 188 DC----VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
C A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG
Sbjct: 247 -CGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHH 305
Query: 243 TMLNDEGLVYSWGYGLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
T+ D ++ G G + + +P TL + P V S+ G
Sbjct: 306 TVCMDSE-GRAYSLGRAEYGRLGLGEGAEEKSVP-TLISRL---PA--VSSVACGASVGY 358
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
A+T G ++ WG QLG G ED P+++
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEM 391
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/167 (25%), Positives = 77/167 (46%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVAS 237
R+V +S + L ++ + +F G ++ GQ+ E+ + + P + + ++ + +
Sbjct: 75 RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFN-VIKIKA 133
Query: 238 GGSACTMLNDEGLVYSWG---YGLLGQGPKVSR--SMKPTLIPSTLFGQHQFNPKSKVES 292
G + + + G +Y WG YG LG G ++ S PT I + L + +
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNL 193
Query: 293 LIAGPCTFGA-----ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
C FGA I+ G ++ WG NQYGQLGLG + P+ +
Sbjct: 194 QYTNIC-FGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPI 239
Score = 145 (56.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 36/151 (23%), Positives = 70/151 (46%)
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+++ CG +HTL LT K++S G+ GQ G+ ++ + P V + ++K+ +
Sbjct: 75 RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPV-DTLSKFNVIKIKA 133
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQIS----TPR-----VLSQCKGVSRI---- 232
+ A+++ GD++ WG+S YGQ+ +M TP ++ + I
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNL 193
Query: 233 --VDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
++ G ++ G ++SWG GQ
Sbjct: 194 QYTNICFGAQHTIAISTTGAIFSWGSNQYGQ 224
Score = 126 (49.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ ++CG+ T++ T K+F G N QLG +E V+ +PLP
Sbjct: 75 RVVSVSCGFNHTLLLTSE----YKIFSMGFNQTGQLG----------IENVVDSA-VPLP 119
Query: 63 VKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEE--DYQGKWFCHN- 118
V S + + G + IT+ + +G++++GQ G G + + + +
Sbjct: 120 VDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPL 179
Query: 119 IADLEGEKIM------DAVC-GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLV 171
I D E + + +C G HT+ ++ +G ++S G GQ GLGH N + P +
Sbjct: 180 IPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPI 239
Query: 172 RGEIEGER 179
+ ER
Sbjct: 240 HLDNSFER 247
Score = 106 (42.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 227 KGVSRIV-DVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH 282
K + RIV D+A G +L EG ++ WG YG LGQG + +S +P T+ G
Sbjct: 266 KTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQS-----VPKTVKGSL 320
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTV 325
+F K+ + G +T ++ +G N++ QLG G++
Sbjct: 321 EF---VKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSI 360
Score = 86 (35.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+T G L++WG NQYGQLG G DQ P V
Sbjct: 285 LTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTV 316
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 174 (66.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 84/332 (25%), Positives = 136/332 (40%)
Query: 17 ATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGN-PLELVMSFVRIPLPVKHPSTQIKHLAT 75
+T+S K ++ G+ +L D K G P++ +P PV+ P + K +
Sbjct: 6 STRSSTKREEVSKNGVEK-RELDESDVMKNGKKPVKRA-KVSSLPKPVRVPGSA-KRI-- 60
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
+ + T+ + FG+ S + G G +E D + + I + ++D G
Sbjct: 61 NKIPELP-TERLNVYVFGSGSMNELGMG-EEEMDVVYRPRLNPILSTDKVGVVDLAVGGM 118
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGHLNNQE---------------TPCLVRGEIEGERI 180
H+ L+ G+VY+ WG + LG L + TP V G + R+
Sbjct: 119 HSAALSHDGRVYT--WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRV 176
Query: 181 VKLSSAVDCVLAVSDKGDVFGWGNSEY--GQISESEMQISTPRVLSQCKGVSRIVDVASG 238
K+ + + A++D G F WG G + S+ Q T +Q + + I +A+G
Sbjct: 177 TKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEP-TQMR-LPEICQLATG 234
Query: 239 GSACTMLNDEGLVYSWGYGLLGQ-GPKV-SRSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
L G VY+WG G Q G ++ R L P L + S+ AG
Sbjct: 235 TDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL-------ALKNIISVGAG 287
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQ 328
AI N G +Y WG N Q G+ VED+
Sbjct: 288 SYHSFAIDNKGRVYAWGLNITRQCGI-EVEDE 318
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 85/352 (24%), Positives = 145/352 (41%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+ + D+A G G A S D +++ G+N D LG +K + V + +
Sbjct: 108 VGVVDLAVG-GMHSAAL-SHDG--RVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGT 163
Query: 62 PVKHPSTQIKHLATGRAH-----TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC 116
P K + HL + T ITDN FT+G +F +C G++ D Q +
Sbjct: 164 PSKVEGA-LSHLRVTKVICSDNLTAAITDNGCCFTWG--TF-RCSDGVLGYSDSQKR--T 217
Query: 117 HNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
+ +I G DH + LT +GKVY+ G G Q G L + L +
Sbjct: 218 AEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLA 277
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWG---NSEYGQISESEMQ---ISTPRVLSQCKGVS 230
+ I+ + + A+ +KG V+ WG + G E E + I+ P ++ +G +
Sbjct: 278 LKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYN 337
Query: 231 RIVDVASGGSACTM-LNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
V +GG T+ L ++G V +WG Q ++ T++ + + +
Sbjct: 338 --VKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTI 395
Query: 290 VESL------IAGPCTFGAITNFGHLYMWGKNQYGQLGLG-TVEDQPFPLKV 334
+ L + G A+T+ G +Y WG + ++G G ED P V
Sbjct: 396 IPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 172 (65.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 62/214 (28%), Positives = 104/214 (48%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
+ ++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 67 QDVVQAEAGGMHTVCLSQSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A+++ G VF WG+ G I E + V Q + + +V VASG
Sbjct: 125 SAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDAPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML ++G +Y+ G G LG+ P++ + + L+P L + + +
Sbjct: 184 LVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
G AI+ GH+Y +G + Y QLG GT
Sbjct: 244 DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGT 277
Score = 142 (55.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 65/277 (23%), Positives = 113/277 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G T T+ D + L+G +++ +G +P KK +P+
Sbjct: 120 KVVQVSAGDSHTAALTE--DGRVFLWGSFRDNNGVIGLLEPMKKS----------MVPVQ 167
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG---IVQEEDYQG--KWFCH 117
V+ + +K +A+G H +++T++ +T G GQ GR QG +
Sbjct: 168 VQLDAPVVK-VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVP 226
Query: 118 NIADLEGE------KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-L 170
L+ + DA CG T ++ G VY G Q G + P L
Sbjct: 227 RCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNL 286
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKG 228
+ + V S + + +G + G +EYG++ E + S P ++S+
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV 346
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQG 262
VS VA G S ++ +G V++WG G LG G
Sbjct: 347 VS---SVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 132 (51.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 52/189 (27%), Positives = 84/189 (44%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG + ++ P LV + +V+ + + +S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLL---QDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L ++G V+ W
Sbjct: 84 QSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMW 312
G G + MK +++P Q Q + P KV S G +TN G LY
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLDAPVVKVAS---GNDHLVMLTNDGDLYTL 196
Query: 313 GKNQYGQLG 321
G + GQLG
Sbjct: 197 GCGEQGQLG 205
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 80/325 (24%), Positives = 129/325 (39%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
FGC N + LG D +G+ E+V V + ++ ++ G +HT +T++
Sbjct: 91 FGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSHTAALTEDG 138
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
F +G SF G++ + K L+ ++ G DH + LT G +Y
Sbjct: 139 RVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLDAP-VVKVASGNDHLVMLTNDGDLY 194
Query: 148 SCGWGADGQTGL---------GH--LNNQETPCLVRGEIEGER-IVKLSSAVDC----VL 191
+ G G GQ G G L P V + G R V+ A C
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAF-CGAYFTF 253
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG T+ D
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSE- 312
Query: 251 VYSWGYGLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
++ G G + + IP TL + V S+ G A++ G +
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIP-TLISRLPV-----VSSVACGASVGYAVSKDGRV 366
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG QLG G ED P+++
Sbjct: 367 FAWGMGTNYQLGTGQDEDAWSPVEM 391
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 172 (65.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 62/214 (28%), Positives = 102/214 (47%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
+ ++ A G HT+ L +SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 67 QDVVQAEAGGMHTVCLNQSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A+++ G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDMPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML +G +Y+ G G LG+ P++ + ++ L+P L + + +
Sbjct: 184 LVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
G AI+ GH+Y +G + Y QLG GT
Sbjct: 244 DAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGT 277
Score = 141 (54.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 68/277 (24%), Positives = 113/277 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
K+ ++ G T T+ D + L+G +++ +G +P KK +V V++ +P
Sbjct: 120 KVVQVSAGDSHTAALTE--DGRVFLWGSFRDNNGVIGLLEPMKKS----MVPVQVQLDMP 173
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRG---IVQEEDYQG------- 112
V +K +A+G H +++T + +T G GQ GR QG
Sbjct: 174 V------VK-VASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 113 KWFCHNIADLEGE-KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPC-L 170
K G + DA CG T ++ G VY G Q G + P L
Sbjct: 227 KCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNL 286
Query: 171 VRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKG 228
+ + V S + + +G + G +EYG++ E + S P ++S+
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV 346
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGL---LGQG 262
VS VA G S ++ +G V++WG G LG G
Sbjct: 347 VS---SVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 80/325 (24%), Positives = 129/325 (39%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
FGC N + LG D +G+ E+V V + ++ ++ G +HT +T++
Sbjct: 91 FGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSHTAALTEDG 138
Query: 88 GAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVY 147
F +G SF G++ + K L+ ++ G DH + LT G +Y
Sbjct: 139 RVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLD-MPVVKVASGNDHLVMLTTDGDLY 194
Query: 148 SCGWGADGQTGL---------GH--LNNQETPCLVRGEIEGER-IVKLSSAVDC----VL 191
+ G G GQ G G L P V + G R V+ A C
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAF-CGAYLTF 253
Query: 192 AVSDKGDVFGWGNSEYGQI-SESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG T+ D
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSE- 312
Query: 251 VYSWGYGLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHL 309
++ G G + + IP TL + V S+ G A++ G +
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIP-TLISRLPV-----VSSVACGASVGYAVSKDGRV 366
Query: 310 YMWGKNQYGQLGLGTVEDQPFPLKV 334
+ WG QLG G ED P+++
Sbjct: 367 FAWGMGTNYQLGTGQDEDAWSPVEM 391
Score = 124 (48.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 50/189 (26%), Positives = 83/189 (43%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG + ++ P LV + +V+ + + ++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLL---QDVVQAEAGGMHTVCLN 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L ++G V+ W
Sbjct: 84 QSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMW 312
G G + MK +++P Q Q + P KV S G +T G LY
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLDMPVVKVAS---GNDHLVMLTTDGDLYTL 196
Query: 313 GKNQYGQLG 321
G + GQLG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 172 (65.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E ++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 67 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A++D G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDVPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML +G +Y+ G G LG+ P++ + ++ L+P + + +
Sbjct: 184 LVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQLGL-GT 324
G AI++ GH+Y +G + Y QLG GT
Sbjct: 244 DAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGT 277
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 87/338 (25%), Positives = 136/338 (40%)
Query: 20 SKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAH 79
SK + FGC N + LG D +G+ E+V V + ++ ++ G +H
Sbjct: 83 SKSGQVYSFGC--NDEGALG-RDTSVEGS--EMVPGKVEL-------QEKVVQVSAGDSH 130
Query: 80 TIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLF 139
T +TD+ F +G SF G++ + K L+ ++ G DH +
Sbjct: 131 TAALTDDGRVFLWG--SFRD-NNGVIGLLEPMKKSMVPVQVQLD-VPVVKVASGNDHLVM 186
Query: 140 LTESGKVYSCGWGADGQTGL---------GH--LNNQETPCLVRGEIEGER-IVKLSSAV 187
LT G +Y+ G G GQ G G L P V + G R V+ A
Sbjct: 187 LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 188 DC----VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGGSAC 242
C A+S +G V+G+G S Y Q+ + P+ L+ K ++ SGG
Sbjct: 247 -CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 243 TMLNDEGLVYSWGYGLLGQGPK-VSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFG 301
T+ D ++ G G + + IP TL + P V S+ G
Sbjct: 306 TVCMDSE-GKAYSLGRAEYGRLGLGEGAEEKSIP-TLISRL---PA--VSSVACGASVGY 358
Query: 302 AITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
A+T G ++ WG QLG G ED P+++ +G Q
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM-MGKQ 395
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 54/189 (28%), Positives = 85/189 (44%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG ++ ++ P LV I E +V+ + + +S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV--SIP-EDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L D+G V+ W
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMW 312
G G + MK +++P Q Q + P KV S G +T G LY
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLDVPVVKVAS---GNDHLVMLTADGDLYTL 196
Query: 313 GKNQYGQLG 321
G + GQLG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 160 (61.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 57/191 (29%), Positives = 91/191 (47%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKG 197
LTE+G+V SCG + GQ G+ H + C+V IE E++V +++ + +A + G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
Query: 198 DVFGWGN--SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGL 250
VF WG + G+ ++ T + S+ G+ S+ + V +G L D G
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLY 310
VY WG GQ + + P +P + H F KV ++ +G A T G ++
Sbjct: 119 VYVWGSNKHGQLANEAAFL-P--VPQKIEA-HCFQ-NEKVTAIWSGWTHLVAQTETGKMF 173
Query: 311 MWGKNQYGQLG 321
WG+ YGQLG
Sbjct: 174 TWGRADYGQLG 184
Score = 154 (59.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 23 KNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
+N ++ CG NS QLG H PR+ +P ++ ++ +A G H +
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQAIELHKEKVVCIAAGLRHAV 52
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HNIADLEGEKIMDAVCGQDHT 137
T + F +G CGR + + +F + LE K M + G DH+
Sbjct: 53 AATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 138 LFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-----ERIVKLSSAVDCVLA 192
LT++G+VY WG++ G L N+ V +IE E++ + S ++A
Sbjct: 111 ASLTDAGEVYV--WGSNKH---GQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Query: 193 VSDKGDVFGWGNSEYGQI 210
++ G +F WG ++YGQ+
Sbjct: 166 QTETGKMFTWGRADYGQL 183
Score = 151 (58.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 62/237 (26%), Positives = 104/237 (43%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T+N + G+NSFGQ G V + +L EK++ G H + T
Sbjct: 1 MLTENGQVLSCGSNSFGQLG---VPHGPR--RCVVPQAIELHKEKVVCIAAGLRHAVAAT 55
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL-SSAVDCVLA-------V 193
SG V+ G G G Q P + E R+ L +S CVLA +
Sbjct: 56 ASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSASL 113
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVY 252
+D G+V+ WG++++GQ++ + P ++ + C ++ + SG + + G ++
Sbjct: 114 TDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMF 173
Query: 253 SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKV-ESLIAGP-CTFGAITNFG 307
+WG GQ + R ++ T L Q F P S+ S+ + P C GA T G
Sbjct: 174 TWGRADYGQ---LGRKLE-TYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA-TEVG 225
Score = 126 (49.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+++ G V G++ +GQ+ + P+ + K ++V +A+G G+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHK--EKVVCIAAGLRHAVAATASGI 59
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLI-----PSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+ WG GL G ++ L PS + G SK ++AG ++T+
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLEN----SKAMCVLAGSDHSASLTD 115
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y+WG N++GQL P P K+
Sbjct: 116 AGEVYVWGSNKHGQLA-NEAAFLPVPQKI 143
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 174 (66.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 70/293 (23%), Positives = 128/293 (43%)
Query: 55 SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQG 112
S + PL + +T++ ++ GR + +T + T+ S G G + E Q
Sbjct: 327 SGISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGAVEQMQP 385
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
++ + G I CG T LT+ G + + G G++G G G+ N+ P +V
Sbjct: 386 QFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVE 445
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSR 231
+ G +V++S VLAV+++ +VF WG + G++ ++ + P+ +S
Sbjct: 446 ALL-GYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVS-LPADFE 503
Query: 232 IVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPST----LFGQHQF 284
V G +++ + + + G + LG KVS + +P+ LF Q
Sbjct: 504 AQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLD-KVSGTEEPSSFCQVEEVHLFQLVQS 562
Query: 285 NPKS--KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVA 335
P + K+ + G A+T G + +G NQ+GQLG P +V+
Sbjct: 563 APLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVS 615
Score = 153 (58.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 65/269 (24%), Positives = 112/269 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IK ++ G T +TD TFG+ S G G G + Q K + L G +++
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVT-QPKI----VEALLGYELVQ 454
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR--GEIEGERIVKLSSAV 187
CG H L +T +V+S G G +G+ GL ++ P V + E +R++ V
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVL---CGV 511
Query: 188 DCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRVLSQCKGV-------------SRIV 233
DC + +S + + GN+ + ++ ++ P Q + V +IV
Sbjct: 512 DCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIV 571
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVES 292
+ G + + ++G +++G GQ G RS + +P +Q + +
Sbjct: 572 YIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSR---VP------YQVSGLQGITM 622
Query: 293 LIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
G AI G +Y WGK G+LG
Sbjct: 623 AACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 49/229 (21%), Positives = 89/229 (38%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ ++CG + T ++ +F G + +LG P + + LP
Sbjct: 451 ELVQVSCGASHVLAVTNERE----VFSWGRGDNGRLGLATQDSHNCPQQ-------VSLP 499
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC-----H 117
+ ++ G +++++ GNN F + G V + FC H
Sbjct: 500 ADFEAQRV---LCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSS-FCQVEEVH 555
Query: 118 -----NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
A L EKI+ G H++ +TE G+ ++ G GQ G H + P V
Sbjct: 556 LFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVS 615
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
G ++G + A LA+ +G+V+ WG G++ E P+
Sbjct: 616 G-LQGITMAACGDAF--TLAIGAEGEVYTWGKGARGRLGRKEEDFGIPK 661
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 165 (63.1 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 60/209 (28%), Positives = 100/209 (47%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E ++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 67 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A++D G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDVPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWG---YGLLGQGPKV------SRSMKPTLIPS-TLFGQHQFNPKSKVE 291
ML +G +Y+ G G LG+ P++ + ++ L+P + + +
Sbjct: 184 LVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Query: 292 SLIAGPCTFGAITNFGHLYMWGKNQYGQL 320
G AI++ GH+Y +G + Y QL
Sbjct: 244 DAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 138 (53.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 54/189 (28%), Positives = 85/189 (44%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG ++ ++ P LV I E +V+ + + +S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV--SIP-EDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L D+G V+ W
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMW 312
G G + MK +++P Q Q + P KV S G +T G LY
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLDVPVVKVAS---GNDHLVMLTADGDLYTL 196
Query: 313 GKNQYGQLG 321
G + GQLG
Sbjct: 197 GCGEQGQLG 205
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V P ++ A G HT+ ++ + ++FG N G GR + +G
Sbjct: 60 PALVSIPEDVVQAEAGGM-HTVCLSKSGQVYSFGCNDEGALGR----DTSVEGSEMVPGK 114
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGE 178
+L+ EK++ G HT LT+ G+V+ G D +G L + + V+ +++
Sbjct: 115 VELQ-EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP 173
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+VK++S D ++ ++ GD++ G E GQ+
Sbjct: 174 -VVKVASGNDHLVMLTADGDLYTLGCGEQGQL 204
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 175 (66.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 58/216 (26%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P+K P L++ V+
Sbjct: 499 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 556
Query: 60 PLPVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
TQ K LA G NE F QC GI+ E Y + +
Sbjct: 557 GCDGTFLLTQSGKVLACGL--------NE----FNKLGLNQCMSGIINHEAYHEVPYTTS 604
Query: 119 IA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
L KI G+ HT L E G++ + G GQ G+G+ + L+ G +
Sbjct: 605 FTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPL 664
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 665 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 700
Score = 164 (62.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 71 KHLATGRAHTIVITDNEGAFTF-----GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + G H V+T + +T+ G GQ G G + Y+ ++ L+G+
Sbjct: 389 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--DKASYRQP---KHVEKLQGK 443
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKL 183
I CG D T+ +T+ G++Y+ G G G+ + E P + + + ++
Sbjct: 444 AIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNP-VEQV 502
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S + V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 503 SCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI-IVAVQCGCDGT 561
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IP-STLFGQHQFNPKSKVESLIA 295
+L G V + G + LG +S + +P +T F + K+ ++
Sbjct: 562 FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAP 621
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G A+ G L +G N+ GQLG+G
Sbjct: 622 GKTHTAALDERGRLLTFGCNKCGQLGVG 649
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 66/280 (23%), Positives = 116/280 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCHNIADLEGE 125
I+ ++ G T+ +TD + FG++ +G G G E Q +F N E
Sbjct: 445 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPV----E 500
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ CG +H + LT + +VYS G G G+ GL + TP V + IV +
Sbjct: 501 QVS---CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP-KALIIVAVQC 556
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-----------ES--EMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ E+ E+ +T L++ +I
Sbjct: 557 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 616
Query: 233 VDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A G + L++ G + ++G G LG G + + L+ L G+
Sbjct: 617 RTIAPGKTHTAALDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCG 675
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
E IA T+ H++ WG G+L + T ++P
Sbjct: 676 DEFTIAA-------TDDNHIFAWGNGGNGRLAM-TPTERP 707
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 174 (66.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P+K P L++ V+
Sbjct: 501 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 558
Query: 60 PLPVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
TQ K LA G NE F QC GI+ E Y + +
Sbjct: 559 GCDGTFLLTQSGKVLACGL--------NE----FNKLGLNQCMSGIINHEAYHEVPYTTS 606
Query: 119 IA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
L KI G+ HT + E G++ + G GQ G+G+ + L+ G +
Sbjct: 607 FTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPL 666
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 667 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 702
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 71 KHLATGRAHTIVITDNEGAFTF-----GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + G H V+T + +T+ G GQ G G + Y+ ++ L+G+
Sbjct: 391 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--DKASYRQP---KHVEKLQGK 445
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLS 184
I CG D T+ +T+ G++Y+ G G G+ + E + + ++S
Sbjct: 446 AIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVS 505
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACT 243
+ V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 506 CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI-IVAVQCGCDGTF 564
Query: 244 MLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IP-STLFGQHQFNPKSKVESLIAG 296
+L G V + G + LG +S + +P +T F + K+ ++ G
Sbjct: 565 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPG 624
Query: 297 PCTFGAITNFGHLYMWGKNQYGQLGLG 323
AI G L +G N+ GQLG+G
Sbjct: 625 KTHTAAIDERGRLLTFGCNKCGQLGVG 651
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 66/280 (23%), Positives = 117/280 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCHNIADLEGE 125
I+ ++ G T+ +TD + FG++ +G G G E Q +F +N E
Sbjct: 447 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPV----E 502
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ CG +H + LT + +VYS G G G+ GL + TP V + IV +
Sbjct: 503 QVS---CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP-KALIIVAVQC 558
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-----------ES--EMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ E+ E+ +T L++ +I
Sbjct: 559 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 618
Query: 233 VDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
VA G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 619 RTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCG 677
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
E IA T+ H++ WG G+L + T ++P
Sbjct: 678 DEFTIAA-------TDDNHIFAWGNGGNGRLAM-TPTERP 709
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 173 (66.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P+K P L++ V+
Sbjct: 482 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 539
Query: 60 PLPVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
TQ K LA G NE F QC GI+ E Y + +
Sbjct: 540 GCDGTFLLTQSGKVLACGL--------NE----FNKLGLNQCMSGIINHEAYHEVPYTTS 587
Query: 119 IA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
L KI G+ HT + E G++ + G GQ G+G+ + L+ G +
Sbjct: 588 FTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPL 647
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 648 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 66/268 (24%), Positives = 117/268 (43%)
Query: 71 KHLATGRAHTIVITDNEGAFTF-----GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + G H V+T + +T+ G GQ G G + Y+ ++ L+G+
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--DKASYRQP---KHVEKLQGK 426
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKL 183
I CG D T+ +T+ G++Y+ G G G+ + E P + + + ++
Sbjct: 427 AIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNP-VEQV 485
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S + V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 486 SCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI-IVAVQCGCDGT 544
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IP-STLFGQHQFNPKSKVESLIA 295
+L G V + G + LG +S + +P +T F + K+ ++
Sbjct: 545 FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAP 604
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G AI G L +G N+ GQLG+G
Sbjct: 605 GKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 65/280 (23%), Positives = 116/280 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCHNIADLEGE 125
I+ ++ G T+ +TD + FG++ +G G G E Q +F N E
Sbjct: 428 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPV----E 483
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ CG +H + LT + +VYS G G G+ GL + TP V + IV +
Sbjct: 484 QVS---CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP-KALIIVAVQC 539
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-----------ES--EMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ E+ E+ +T L++ +I
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 233 VDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
E IA T+ H++ WG G+L + T ++P
Sbjct: 659 DEFTIAA-------TDDNHIFAWGNGGNGRLAM-TPTERP 690
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P+K P L++ V+
Sbjct: 482 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 539
Query: 60 PLPVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
TQ K LA G NE F QC GI+ E Y + +
Sbjct: 540 GCDGTFLLTQSGKVLACGL--------NE----FNKLGLNQCMSGIINHEAYHEIPYTTS 587
Query: 119 IA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
L KI G+ HT + E G++ + G GQ G+G+ + L+ G +
Sbjct: 588 FTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPL 647
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 648 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 67/268 (25%), Positives = 117/268 (43%)
Query: 71 KHLATGRAHTIVITDNEGAFTF-----GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + G H V+T + +T+ G GQ G G + Y+ ++ L+G+
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--DKASYRQP---KHVEKLQGK 426
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKL 183
I CG D T+ +T+ G++Y+ G G G+ + E P + + + ++
Sbjct: 427 AIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNP-VEQV 485
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S + V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 486 SCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALI-IVAVQCGCDGT 544
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IP-STLFGQHQFNPKSKVESLIA 295
+L G V + G + LG +S + IP +T F + K+ ++
Sbjct: 545 FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAP 604
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G AI G L +G N+ GQLG+G
Sbjct: 605 GKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 129 (50.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 65/280 (23%), Positives = 117/280 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG----RGIVQEEDYQGKWFCHNIADLEGE 125
I+ ++ G T+ +TD + FG++ +G G G E Q +F +N E
Sbjct: 428 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPV----E 483
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ CG +H + LT + +VYS G G G+ GL + TP V + IV +
Sbjct: 484 QVS---CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP-KALIIVAVQC 539
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQIS-----------ES--EMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ E+ E+ +T L++ +I
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKI 599
Query: 233 VDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+A G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
E IA T+ H++ WG G+L + T ++P
Sbjct: 659 DEFTIAA-------TDDNHIFAWGNGGNGRLAM-TPTERP 690
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 126 (49.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG H+ +TDN A+ +G NS GQC V + Y + +IAD E +I
Sbjct: 96 VATGSFHSGAVTDNGVAYMWGENSAGQCA---VANQQYVPEPNPVSIADSEASPLLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSISREIWA--WGTGCQLGL 182
Score = 119 (46.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 515 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLA 573
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ S+ + PR L++ + + VA+G L D
Sbjct: 574 LTAKSQVYSWGSNTFGQLGHSDFPTTVPR-LAKISSENGVWSVAAGRDYSLFLVDTEDFQ 632
Query: 249 -GLVYS 253
GL YS
Sbjct: 633 PGLYYS 638
Score = 98 (39.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 477 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 535
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GG L + VYSWG GQ +
Sbjct: 536 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ---LG 592
Query: 267 RSMKPTLIP 275
S PT +P
Sbjct: 593 HSDFPTTVP 601
Score = 73 (30.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 490 QVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR- 547
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 548 LQPLCV-KCLDGK-------EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTG----CQLGLITTAFPVTK--PQKVEHLAGRV 202
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 203 VLQVACGAFHSLALVQ 218
Score = 53 (23.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WGK + GQLG G V + PL V
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCV 553
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 126 (49.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG H+ +TDN A+ +G NS GQC V + Y + +IAD E +I
Sbjct: 96 VATGSFHSGAVTDNGVAYMWGENSAGQCA---VANQQYVPEPNPVSIADSEASPLLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSISREIWA--WGTGCQLGL 182
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 33/126 (26%), Positives = 63/126 (50%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 515 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLA 573
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ S+ + PR L++ + + +A+G L D
Sbjct: 574 LTAKSQVYSWGSNTFGQLGHSDFPTTVPR-LAKISSENGVWSIAAGRDYSLFLVDTEDFQ 632
Query: 249 -GLVYS 253
GL YS
Sbjct: 633 PGLYYS 638
Score = 98 (39.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 477 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 535
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GG L + VYSWG GQ +
Sbjct: 536 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ---LG 592
Query: 267 RSMKPTLIP 275
S PT +P
Sbjct: 593 HSDFPTTVP 601
Score = 73 (30.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 490 QVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR- 547
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 548 LQPLCV-KCLDGK-------EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 57 (25.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTG----CQLGLITTAFPVTK--PQKVEHLAGRV 202
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 203 VLQVACGAFHSLALVQ 218
Score = 53 (23.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WGK + GQLG G V + PL V
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCV 553
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 56/216 (25%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P++ P L++ V+
Sbjct: 480 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQC 537
Query: 60 PLPVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
TQ K LA G NE F QC GI+ E Y + +
Sbjct: 538 GCDGTFLLTQSGKVLACGL--------NE----FNKLGLNQCMSGIINHEAYHEVPYTTS 585
Query: 119 IA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
L KI G+ HT + E G++ + G GQ G+G+ + L+ G +
Sbjct: 586 FTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPL 645
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 646 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 681
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 66/268 (24%), Positives = 118/268 (44%)
Query: 71 KHLATGRAHTIVITDNEGAFTF-----GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + G H V+T + +T+ G GQ G G + Y+ ++ L+G+
Sbjct: 370 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--DKASYRQP---KHVEKLQGK 424
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKL 183
I CG D T+ +T+ G++Y+ G G G+ ++ E P + + + ++
Sbjct: 425 AIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNP-VEQV 483
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S + V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 484 SCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALI-IVAVQCGCDGT 542
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IP-STLFGQHQFNPKSKVESLIA 295
+L G V + G + LG +S + +P +T F + K+ ++
Sbjct: 543 FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAP 602
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G AI G L +G N+ GQLG+G
Sbjct: 603 GKTHTAAIDERGRLLTFGCNKCGQLGVG 630
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 65/281 (23%), Positives = 117/281 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE----EDYQGKWFCHNIADLEGE 125
I ++ G T+ +TD + FG++ +G G V E Q +F N E
Sbjct: 426 IHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPV----E 481
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLS 184
++ CG +H + LT + +VYS G G G+ GL + TP R ++ + IV +
Sbjct: 482 QVS---CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP--QRVDVPKALIIVAVQ 536
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS-----------ES--EMQISTPRVLSQCKGVSR 231
D ++ G V G +E+ ++ E+ E+ +T L++ +
Sbjct: 537 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 596
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I +A G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 597 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSC 655
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
E IA T+ H++ WG G+L + T ++P
Sbjct: 656 GDEFTIAA-------TDDNHIFAWGNGGNGRLAM-TPTERP 688
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/216 (25%), Positives = 97/216 (44%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG VV T++K+ + +GCG L DS+ Y+ P++ P L++ V+
Sbjct: 482 VEQVSCGDNHVVVLTRNKE--VYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQC 539
Query: 60 PLPVKHPSTQI-KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
TQ K LA G NE F QC GI+ E Y + +
Sbjct: 540 GCDGTFLLTQSGKVLACGL--------NE----FNKLGLNQCMSGIINHEAYHEVPYTTS 587
Query: 119 IA---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
L KI G+ HT + E G++ + G GQ G+G+ + L+ G +
Sbjct: 588 FTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPL 647
Query: 176 EGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 648 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 66/268 (24%), Positives = 118/268 (44%)
Query: 71 KHLATGRAHTIVITDNEGAFTF-----GNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
+ + G H V+T + +T+ G GQ G G + Y+ ++ L+G+
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--DKASYRQP---KHVEKLQGK 426
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET--PCLVRGEIEGERIVKL 183
I CG D T+ +T+ G++Y+ G G G+ ++ E P + + + ++
Sbjct: 427 AIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNP-VEQV 485
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSAC 242
S + V+ ++ +V+ WG EYG++ +SE TP+ + K + IV V G
Sbjct: 486 SCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALI-IVAVQCGCDGT 544
Query: 243 TMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTL---IP-STLFGQHQFNPKSKVESLIA 295
+L G V + G + LG +S + +P +T F + K+ ++
Sbjct: 545 FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAP 604
Query: 296 GPCTFGAITNFGHLYMWGKNQYGQLGLG 323
G AI G L +G N+ GQLG+G
Sbjct: 605 GKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 65/281 (23%), Positives = 117/281 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE----EDYQGKWFCHNIADLEGE 125
I ++ G T+ +TD + FG++ +G G V E Q +F N E
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPV----E 483
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI-EGERIVKLS 184
++ CG +H + LT + +VYS G G G+ GL + TP R ++ + IV +
Sbjct: 484 QVS---CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP--QRVDVPKALIIVAVQ 538
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQIS-----------ES--EMQISTPRVLSQCKGVSR 231
D ++ G V G +E+ ++ E+ E+ +T L++ +
Sbjct: 539 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 598
Query: 232 IVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKS 288
I +A G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSC 657
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQP 329
E IA T+ H++ WG G+L + T ++P
Sbjct: 658 GDEFTIAA-------TDDNHIFAWGNGGNGRLAM-TPTERP 690
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 70/281 (24%), Positives = 126/281 (44%)
Query: 66 PST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG 124
PS IK +A + HT+V+T++ F FG+NS GQ G G + + G+ + L+G
Sbjct: 464 PSRISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKME-NGRL----VESLKG 518
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGERIVKL 183
I G ++ + G + + +G GLG + P L+ ++ E I +
Sbjct: 519 RDIQSVGVGNYFSVICCDRGTLLT--FGTAKNLGLGKDAKDSAKPMLLE-QLLRENIKDI 575
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ--ISTPRV--LSQCKGV---------- 229
D V+AV + G+ GWG+++YGQ+ ++ + +V L++ +
Sbjct: 576 YCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPS 635
Query: 230 -SRIVDVASGGSACTMLNDEGLVYSWG---YGLLGQGPKVSRSMKPTLIPSTLFGQH--- 282
+IV +G A +L+D+G + + G + L +V K P+ +
Sbjct: 636 NKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTIL 695
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG 323
Q P+ V+ + G G I G + ++G+N +LGLG
Sbjct: 696 QGFPERVVDFSV-GSYHSGVILESGQVMIFGRNDNTELGLG 735
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 40/146 (27%), Positives = 66/146 (45%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEM-QISTPRVLSQCKGVSRIVDVASGGSACTMLNDEG 249
+ +++ ++FG+G++ GQ+ + ++ R++ KG I V G + D G
Sbjct: 480 MVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRD-IQSVGVGNYFSVICCDRG 538
Query: 250 LVYSWGYGL-LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGH 308
+ ++G LG G S KP L+ L + ++ + G A+ G
Sbjct: 539 TLLTFGTAKNLGLGKDAKDSAKPMLLEQLL--------RENIKDIYCGHDHVVAVLESGE 590
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
WG NQYGQLGL T+E P KV
Sbjct: 591 CLGWGSNQYGQLGLPTLEHFFAPTKV 616
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 168 (64.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 69/294 (23%), Positives = 128/294 (43%)
Query: 55 SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ--EEDYQG 112
S + PL + +T++ ++ GR +T + + G G + E Q
Sbjct: 325 SGITTPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQP 384
Query: 113 KWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVR 172
++ + G I CG T LT+ G + + G G++G G G+ + P +V
Sbjct: 385 QFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVE 444
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI--STPRVLSQCKGVS 230
+ G +V+++ VLAVS++ +VF WG + G++ ++ S +V + +
Sbjct: 445 ALL-GYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEA 503
Query: 231 RIVDVASGGSACTMLNDEGLVY-SWGYGLLGQGPKVSRSMKPT----LIPSTLFGQHQFN 285
+ V S +N++ L S LG ++S + +P+ + +T+F Q
Sbjct: 504 QRVICGIDSSMVLTVNNQILACGSNRCNKLGLD-RISSAEEPSPEDQVEEATVFTCAQSA 562
Query: 286 PKSKVESLIA--GPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAVG 337
P ++ + A G A+T G Y +G NQ+GQLG + + P + VG
Sbjct: 563 PLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVP-HLVVG 615
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 65/282 (23%), Positives = 118/282 (41%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH++ G T +TD TFG+ S G G G + Q K + L G +++
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVS-QPKI----VEALLGYEMVQ 453
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETP--CLVRGEIEGERIVKLSSAV 187
CG H L ++ +V++ G G +G+ GLG L +P V E E +R++ +
Sbjct: 454 VACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVI---CGI 510
Query: 188 DCVLAVSDKGDVFGWGNSEYGQIS------------ESEMQISTPRVLSQCKGVSR--IV 233
D + ++ + G++ ++ E +++ +T +Q +++ +V
Sbjct: 511 DSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVV 570
Query: 234 DVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESL 293
G + + G Y++G GQ + S + + +P + G KV +
Sbjct: 571 CADIGTAHSAAVTASGQCYTFGSNQHGQ--LGTNSCRNSRVPHLVVGLRAM----KVTVV 624
Query: 294 IAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVED-QPFPLKV 334
G AI G + WGK G+LG E P P+++
Sbjct: 625 ACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQL 666
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/228 (21%), Positives = 92/228 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG + + ++ +F G + +LG LE S ++ +P
Sbjct: 450 EMVQVACGASHVLAVSNERE----VFAWGRGDNGRLGL-------GTLECHNSPQQVAVP 498
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE------EDY--QGKW 114
+H + ++ G ++V+T N G+N + G + ED +
Sbjct: 499 PEHEAQRV---ICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATV 555
Query: 115 F-CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
F C A L E ++ A G H+ +T SG+ Y+ G GQ G N P LV G
Sbjct: 556 FTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG 615
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
+ ++ ++ +A+ G+V WG G++ + + PR
Sbjct: 616 -LRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPR 662
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 133 (51.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 32/98 (32%), Positives = 56/98 (57%)
Query: 115 FCHNIA-DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
FC +A +L ++ G +H L L E+G+V+S G G GQ G G L + P L+
Sbjct: 153 FCQPLAPEL---RVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEA 209
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
++G R+ ++++ + VS+ GD++ WG +E GQ++
Sbjct: 210 -LQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLA 246
Score = 127 (49.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
R+ +L + L + + G VF WG +GQ+ ++ PR+L +G+ R+ +VA+
Sbjct: 162 RVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGL-RMAEVAA 220
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
GG +++ G +Y WG+ GQ +RS
Sbjct: 221 GGWHSVCVSETGDIYIWGWNESGQLALPTRS 251
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +++ L G H +++ + F++G GQ G G ++ E + + + L+G
Sbjct: 159 PELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAE-LEPRL----LEALQGL 213
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
++ + G H++ ++E+G +Y GW GQ L
Sbjct: 214 RMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 247
Score = 72 (30.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 303 ITNFGHLYMWGKNQYGQLGL--GTVEDQP 329
+T G LY WG +YGQLG T DQP
Sbjct: 317 VTRTGELYTWGWGKYGQLGHKDSTSSDQP 345
Score = 55 (24.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 236 ASGGSACT-MLNDEGLVYSWGYGLLGQ-GPKVSRS 268
AS GS T ++ G +Y+WG+G GQ G K S S
Sbjct: 307 ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTS 341
Score = 54 (24.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE 214
G VK S V+ G+++ WG +YGQ+ +
Sbjct: 301 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKD 338
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 58/222 (26%), Positives = 97/222 (43%)
Query: 110 YQGKWF--CHNIADLE-GEK--IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNN 164
YQ K F C ++A ++ K I+D H + + E G Y+ G G GQ GL L
Sbjct: 432 YQLKAFGTCFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEA 491
Query: 165 -QETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQ-ISTPRV 222
+ P + + +V + + V+ G + G++ + + + E + +P++
Sbjct: 492 WKHYPSRMES-VRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKL 550
Query: 223 LSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLF 279
+++ V R+ VA+G L+ EG VY WG G LG G + K P +
Sbjct: 551 IARLADV-RVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLG-NYQQQQK---FPQKIL 605
Query: 280 GQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
H K+K + GP T + G L++ G N Y +LG
Sbjct: 606 LSHV---KTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLG 644
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 68/273 (24%), Positives = 116/273 (42%)
Query: 55 SFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKW 114
S I LP P I +A +H +V+ ++ A+ +G + GQ G + E + K
Sbjct: 442 SMAPIQLP---PKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLG--LTALEAW--KH 494
Query: 115 FCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE 174
+ + + ++ A G T+ +T++G + SCG A G N +P L+
Sbjct: 495 YPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLI-AR 553
Query: 175 IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS--ESEMQISTPR--VLSQCKGVS 230
+ R+ ++++ + VLA+S +G V+ WG S G + + Q P+ +LS K
Sbjct: 554 LADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKP 613
Query: 231 RIVDVASGGSACTMLNDEGLVY-SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
+ SA N E V S Y LG RS K T F + Q P
Sbjct: 614 SKIYCGPDTSAVLFANGELHVCGSNDYNKLG----FQRSAK-----ITAFKKVQL-PHKV 663
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGL 322
++ + + + G++Y G+N GQ G+
Sbjct: 664 TQACFSSTHSVFLVEG-GYVYTMGRNAEGQRGI 695
Score = 136 (52.9 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQ--GKWFCHNIADLEGEKI 127
+ H+ T + I + A F N CG + +Q K L K+
Sbjct: 606 LSHVKT-KPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLP-HKV 663
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
A H++FL E G VY+ G A+GQ G+ H N+ + P LV ++ IVK + +
Sbjct: 664 TQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLV-DSVKSRYIVKANCSD 722
Query: 188 DCVLAVSDKGDVFGWG 203
C + S+ + WG
Sbjct: 723 QCTIVASEDNIITVWG 738
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 132 (51.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
R +L + L + + G VF WG +GQ+ ++ PR+L +G+ + +VA+
Sbjct: 96 RARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLP-VAEVAA 154
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSM-KPT-LIPSTLFGQHQ--FNPKSKVESL 293
GG +++ G +Y WG+ GQ SRS+ + T IP G ++ F + +
Sbjct: 155 GGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTAKGE 214
Query: 294 IAGPCTFGAITNF 306
P F AI F
Sbjct: 215 DGAPAPFIAIQPF 227
Score = 127 (49.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H L L E+G+V+S G G GQ G G L + P L+ ++G + ++++ +
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEA-LQGLPVAEVAAGGWHSVC 161
Query: 193 VSDKGDVFGWGNSEYGQIS 211
VS+ GD++ WG +E GQ++
Sbjct: 162 VSETGDIYIWGWNESGQLA 180
Score = 108 (43.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 57 VRIPLP-VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF 115
+R P P P + + L G H +++ + F++G GQ G G ++ E
Sbjct: 83 LRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEP---- 138
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ L+G + + G H++ ++E+G +Y GW GQ L
Sbjct: 139 -RLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 181
Score = 65 (27.9 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 303 ITNFGHLYMWGKNQYGQLG 321
+T G LY WG +YGQLG
Sbjct: 252 VTGTGELYTWGWGKYGQLG 270
Score = 57 (25.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 220 PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSM 269
P +L G +V + G ++ G +Y+WG+G GQ G K + S+
Sbjct: 228 PALLDLPLGAD-VVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSL 277
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 146 (56.5 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 56/183 (30%), Positives = 86/183 (46%)
Query: 160 GHLNNQE-TPCLVRGE-----IEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ---- 209
G LN E TP + E EG ++V+L++ + A+ G+V+ WG +
Sbjct: 141 GDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILG 200
Query: 210 ISESEMQIS-TP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-GPKVS 266
+ +++I TP +V + K IV +A G L++EG+V++WG G Q G KV
Sbjct: 201 FYQDKIKIQKTPWKVPTFSK--YNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVM 258
Query: 267 RSMK-PTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGT- 324
+ TL P FG V+ + +G A+T L WG NQ+GQ G+
Sbjct: 259 ERFRLKTLDPRP-FGLRH------VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSED 311
Query: 325 VED 327
VED
Sbjct: 312 VED 314
Score = 136 (52.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 40/146 (27%), Positives = 66/146 (45%)
Query: 123 EGEKIMDAVCGQDHTLFLTESGKVYSCGWGA----DGQTGL--GHLNNQETPCLVRGEIE 176
EG K++ + + L +G+VY+ WG +G G + Q+TP V
Sbjct: 163 EGHKVVQLAATDNMSCALFSNGEVYA--WGTFRCNEGILGFYQDKIKIQKTPWKVP-TFS 219
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCK-GVSRIVDV 235
IV+L+ D +L + ++G VF WGN + Q+ M+ + L G+ + +
Sbjct: 220 KYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYI 279
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQ 261
ASG + C L + + SWG GQ
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQ 305
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 59/235 (25%), Positives = 94/235 (40%)
Query: 22 DKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
D+ +F G +QLG RK L R P ++H +K++A+G H
Sbjct: 237 DEEGMVFAWGNGQQNQLG----RKVMERFRLKTLDPR-PFGLRH----VKYIASGENHCF 287
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCH--NIADLEGEKIMDAVCGQDHTLF 139
+T + ++G N FGQCG V E+ G +A + I G+ H+L
Sbjct: 288 ALTKDNKLVSWGLNQFGQCG---VSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLI 344
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQE-TPCLVRGEIEG-------ERIVKLSSAV---D 188
L++ G +YSCG + G+ N E T V G+ + K S
Sbjct: 345 LSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSH 404
Query: 189 CVLAVSDKGDVFGWGNSEYGQIS----ESEMQISTPRVLSQCKGVSRIVDVASGG 239
+AV+ G + WG E + E + ++ T R+ + I+ V GG
Sbjct: 405 HSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPT-RIKNTATQDHNIILVGCGG 458
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 53/233 (22%), Positives = 99/233 (42%)
Query: 70 IKHLATGRAHTIVITDNEG-AFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
I LA G+ H I+ D EG F +GN Q GR ++ E ++ K L K +
Sbjct: 223 IVQLAPGKDH-ILFLDEEGMVFAWGNGQQNQLGRKVM--ERFRLKTLDPRPFGLRHVKYI 279
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE---IEGERIVK-LS 184
+ G++H LT+ K+ S G GQ G+ + ++ + + + + +++ ++
Sbjct: 280 AS--GENHCFALTKDNKLVSWGLNQFGQCGVSE-DVEDGALVTKPKRLALPDNVVIRSIA 336
Query: 185 SAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---------STPRVL---SQCKGVSRI 232
+ L +S GD++ G + ++ + + R + ++ V +
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 233 VDVASGGSACTMLNDEGLVYSWGYG---LLGQGPKVSRSMKPTLIPSTLFGQH 282
VA+G + G+ YSWG+G +G GP + PT I +T H
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDH 449
Score = 56 (24.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
F +G S + G G + + + + + KI+ G HTL L E V+S
Sbjct: 49 FCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS- 107
Query: 150 GWGADGQTGLG 160
WG + LG
Sbjct: 108 -WGCNDVGALG 117
Score = 54 (24.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 25 LKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVIT 84
L +F G S +LG P K E+ + LP +I A G HT+ +
Sbjct: 46 LDIFCWGTGSMCELGL-GPLAKNK--EVKRPRLNPFLP--RDEAKIISFAVGGMHTLALD 100
Query: 85 DNEGAFTFGNNSFGQCGR 102
+ +++G N G GR
Sbjct: 101 EESNVWSWGCNDVGALGR 118
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 162 (62.1 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 68/276 (24%), Positives = 119/276 (43%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKL-FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIP 60
+ I +ACG FT T D+ + + FG G S+ LG+ P +V + +
Sbjct: 399 VTIKHVACGDLFTACLT---DRGIIMTFGSG--SNGCLGHGSLNDISQPT-IVEALL--- 449
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIA 120
++ +A G +H + ++ F +G G+ G G E + C +
Sbjct: 450 ------GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGT--RESH----CCPQLV 497
Query: 121 DLE-GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGER 179
+ G++ VCG D ++ LT G+ +CG + GL L+ E P + E
Sbjct: 498 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT 557
Query: 180 IVKLSSA---------VDC----VLAVSDKGDVFGWGNSEYGQISESEMQIS-TPRVLSQ 225
L SA VD L ++ GD + +G++++GQ+ + ++S P +
Sbjct: 558 FTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG 617
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+G+ +I VA G + + EG V+SWG G G+
Sbjct: 618 LQGI-KISTVACGDAFTVAIGAEGEVFSWGKGARGR 652
Score = 162 (62.1 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 67/288 (23%), Positives = 119/288 (41%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQE--EDYQGKWFCH 117
PL + +T++ +A GR +T + + G G ++ E Q ++
Sbjct: 332 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSR 391
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ G I CG T LT+ G + + G G++G G G LN+ P +V + G
Sbjct: 392 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL-G 450
Query: 178 ERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVA 236
+V+++ VLA+S + ++F WG + G++ + P+++ G V
Sbjct: 451 YEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPG-QEAQRVV 509
Query: 237 SGGSACTMLNDEGLVYSWG------YGL----LGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
G + +L G + G GL LG+ P + ++ + T G +
Sbjct: 510 CGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEA-VTFTPLGSAPLDQ 568
Query: 287 KSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
+ + S+ GP +T G Y +G NQ+GQLG P +V
Sbjct: 569 EPLL-SVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRV 615
Score = 146 (56.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 53/228 (23%), Positives = 93/228 (40%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLP 62
++ +ACG + + ++ LF G +LG P +LV P+P
Sbjct: 452 EMVQVACGASHVLALSTERE----LFAWGRGDGGRLGLGTRESHCCP-QLV------PMP 500
Query: 63 VKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ--EEDYQGKWFCHNI- 119
P + + + G ++++T A G+N F + G + EE + +
Sbjct: 501 ---PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT 557
Query: 120 ------ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRG 173
A L+ E ++ G H+L LT SG Y+ G GQ G PC V+G
Sbjct: 558 FTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG 617
Query: 174 EIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPR 221
++G +I ++ +A+ +G+VF WG G++ + PR
Sbjct: 618 -LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPR 664
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 65/280 (23%), Positives = 108/280 (38%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 401 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN--DISQPTI---VEALLGYEMVQ 455
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG H L L+ ++++ G G G+ GLG + P LV G+ ++ +D
Sbjct: 456 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMP-PGQEAQRVVCGIDS 514
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS----------- 237
+ ++ G G++ + ++ + + P Q + + S
Sbjct: 515 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSV 574
Query: 238 --GGSACTMLNDEGLVYSWGYGLLGQ-GPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLI 294
G + +L G Y++G GQ G R + P + G K+ ++
Sbjct: 575 DLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRA---PCRVQGLQGI----KISTVA 627
Query: 295 AGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G AI G ++ WGK G+LG ED P V
Sbjct: 628 CGDAFTVAIGAEGEVFSWGKGARGRLGRKD-EDAGLPRPV 666
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 155 (59.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 65/254 (25%), Positives = 107/254 (42%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV 63
I I+CG T++ D++ +L+ CG N Q GY NPL ++RI V
Sbjct: 33 IEKISCGGNHTLLL----DEDSQLWACGDNRKGQCGYEVKEPLYNPLS--PDYLRIFTRV 86
Query: 64 KHPSTQIKHLATGRAHTIVI-TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
H L G ++++ D + G G+ G+G + QG +I L
Sbjct: 87 SHERWVF--LTCGWEFSVIVHADRRRVCSCGEGLSGELGQG--NRSNSQGLREI-DIPYL 141
Query: 123 EGEK-IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIV 181
+ ++ I+D G H + +T G +Y CG G GQ G + + G IE + V
Sbjct: 142 DDKEFIIDISAGLRHWICVTNEGNLYGCGDGRKGQLGPVVMKTVNKVSFL-GRIEHAQAV 200
Query: 182 KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
VL + G V G ++ +E + + LS S I +++ S
Sbjct: 201 VCGVQFSAVL--QETGHVIVLGGEKWNVAAECDAWQANNSELS-----SSICSISANWST 253
Query: 242 CTMLNDEGLVYSWG 255
++L+ EG VY++G
Sbjct: 254 LSLLSTEGCVYAFG 267
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 230 SRIVDVASGGSACTMLNDEG--LVYSW 254
S IV +ASG + +G L+Y W
Sbjct: 280 SDIVQIASGTEHNILRTKKGSVLIYGW 306
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 144 (55.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 65/238 (27%), Positives = 100/238 (42%)
Query: 28 FGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNE 87
F G N QLG P + S L +P++ + +A G HT+++T +
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSA-NPTSPVVQVAAGGNHTLLLTQDG 63
Query: 88 GAFTFGNNSFGQCG-RGIVQEEDYQGKW---FCHNI---ADLEGEKIMDAVCGQDHTLFL 140
++ G+ + G CG + + G+ H I A+ + + +
Sbjct: 64 EIYSSGDPASGACGLKSATADSAGAGQPRPPVFHKIHVPAEQAAQSPGRLIAATWEASII 123
Query: 141 T---ESGK----VYSCGWGADGQTGLGHLNNQ---ETPCLVRGEIEGERIVKLSSAVDCV 190
T E G+ VYS G G+ G+ G G L + P E E +V LS+ + V
Sbjct: 124 TGPDEQGRRNRRVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETE-VVGLSACMGHV 182
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+AV GDV+GWGN GQ+ E I+ PR + +GV V A+ G T L E
Sbjct: 183 VAVLSNGDVYGWGNGRKGQLGAPEGIITEPRKI---EGVPFKVAKAACGKEFTCLVGE 237
Score = 91 (37.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 89 AFTFGNNSFGQCGRGIVQEEDY---QGKWFCHNIADLEGEK---IMDAVCGQDHTLFLTE 142
AF G+N GQ G G +ED + F +L ++ G +HTL LT+
Sbjct: 4 AFALGSNGSGQLGIG--HKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQ 61
Query: 143 SGKVYSCGWGADGQTGL 159
G++YS G A G GL
Sbjct: 62 DGEIYSSGDPASGACGL 78
Score = 77 (32.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 32/94 (34%), Positives = 44/94 (46%)
Query: 251 VYSWGYGL---LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
VYS+G G LGQGP + R P P F P+++V L A A+ + G
Sbjct: 136 VYSFGCGSKGELGQGPLIIRV--PFAQPIANFPP----PETEVVGLSACMGHVVAVLSNG 189
Query: 308 HLYMWGKNQYGQLGL--GTVED----QPFPLKVA 335
+Y WG + GQLG G + + + P KVA
Sbjct: 190 DVYGWGNGRKGQLGAPEGIITEPRKIEGVPFKVA 223
Score = 52 (23.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 307 GHLYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
G + WG+N +GQL + P ++AVG +
Sbjct: 281 GSILSWGRNDHGQLA---PSELPKMSQIAVGSE 310
Score = 48 (22.0 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 18/67 (26%), Positives = 26/67 (38%)
Query: 199 VFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSAC----TMLNDEGLVYSW 254
V+ +G G++ + + I P +V G SAC + G VY W
Sbjct: 136 VYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVV-GLSACMGHVVAVLSNGDVYGW 194
Query: 255 GYGLLGQ 261
G G GQ
Sbjct: 195 GNGRKGQ 201
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 119 (46.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 519 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLA 577
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ S+ + PR L++ + + VA+G L D
Sbjct: 578 LTAKSQVYSWGSNTFGQLGHSDFPTTVPR-LAKVNSENGVWSVAAGQDYSLFLVDTEDFQ 636
Query: 249 -GLVYS 253
GL YS
Sbjct: 637 PGLCYS 642
Score = 115 (45.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG HT +TD+ + +G NS GQC V + Y + +I+D E +I
Sbjct: 101 VATGSFHTGAVTDSGVVYMWGENSAGQCA---VANQPYVPEPNPVSISDSETSPLLAVRI 157
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 158 LQLACGEEHTLALSLSREIWA--WGTGCQLGL 187
Score = 100 (40.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 481 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 539
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GG L + VYSWG GQ +
Sbjct: 540 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ---LG 596
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
S PT +P + N ++ V S+ AG
Sbjct: 597 HSDFPTTVPRLA----KVNSENGVWSVAAG 622
Score = 73 (30.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 494 QVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR- 551
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 552 LQPLCV-KCLDGK-------EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 596
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 154 AVRILQLACGEEHTLALSLSREIWAWGTG----CQLGLITTTFPVTK--PQKVEHLAGRV 207
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 208 VLQVACGAFHSLALVQ 223
Score = 53 (23.7 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKV 334
++ WGK + GQLG G V + PL V
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCV 557
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 147 (56.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 40 YHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQ 99
Y+ +K P E + + L + + Q+ + GR HT+++T+N G ++ GNN+ Q
Sbjct: 1146 YYSAQKSTEPPEPAHAVKSLDL-LSQLNLQVHAIKCGRQHTLILTNN-GLYSLGNNNLCQ 1203
Query: 100 CGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
G G + Q + L+G I GQ H + + GK+Y GWG GQ G
Sbjct: 1204 LGIGRHMQMALQPML----VTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQ 1258
Query: 160 GHLNNQETPCLVRGEIEGERIVKLS 184
G N TP LV + ++I+++S
Sbjct: 1259 GSCENIATPQLV-SFFKFKKILQIS 1282
Score = 66 (28.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 167 TPCLV-RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQ 225
TP LV E+ G RI+++SS + +S ++ WG + Q+ + S
Sbjct: 1490 TPHLVDTSEVAG-RILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSP 1548
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ-----GPKVSRSMKPTL-IPST 277
+ R + V G ++ + +V ++G GQ GP V R + + +P+T
Sbjct: 1549 IDSIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVERMRQRVVCLPAT 1606
Score = 50 (22.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 289 KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++ + +G F I++ LY WGKN QLG
Sbjct: 1502 RILQISSGLFHFCLISSSCTLYTWGKNLEHQLG 1534
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/163 (30%), Positives = 84/163 (51%)
Query: 118 NIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQT---GLGHLNNQETPCLVRGE 174
+I + EG K + AV G H+ LT G+VY CG G G+ + + V+ E
Sbjct: 178 DIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFE 237
Query: 175 --IEGE-RIVKLSSAVDCVLAVSDKGDVFGWGN--SEYGQISES----EMQISTPRVLSQ 225
IE E +IV L++ A++D+G V WGN + G + +MQ + ++ Q
Sbjct: 238 EDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQ 297
Query: 226 CKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
K +IV +A+G + ML+++G + ++G G +GQ + SR+
Sbjct: 298 AK--RKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRT 338
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 174 EIEGE-RIVKLSSAVDCVLAVSDKGDVFGWGN--SEYGQISES----EMQISTPRVLSQC 226
+IE E +IV L++ A++D+G V WGN + G + +MQ + ++ Q
Sbjct: 239 DIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQA 298
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLF----GQH 282
K +IV +A+G + ML+++G + ++G G +GQ + RS + I S G H
Sbjct: 299 K--RKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQ---LGRSSRTKTIRSKYMCDESGDH 353
Query: 283 -----QFNPKSKVESLIAG---PCTFGAITNF--GHLYMWGKNQYGQLGL 322
+F K K ++A F I + G Y +G N Y QLG+
Sbjct: 354 LLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGI 403
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 147 (56.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E ++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 67 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 124
Query: 184 SSAVDCVLAVSDKGDVFGWGN--SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSA 241
S+ A++D G VF WG+ G I E + V Q + +V VASG
Sbjct: 125 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE-PMKKSMVPVQVQLDVPVVKVASGNDH 183
Query: 242 CTMLNDEGLVYSWGYGLLGQ 261
ML +G +Y+ G G GQ
Sbjct: 184 LVMLTADGDLYTLGCGEQGQ 203
Score = 138 (53.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 54/189 (28%), Positives = 85/189 (44%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG ++ ++ P LV I E +V+ + + +S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV--SIP-EDVVQAEAGGMHTVCLS 83
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L D+G V+ W
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 255 GYGLLGQGP-KVSRSMKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMW 312
G G + MK +++P Q Q + P KV S G +T G LY
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPV----QVQLDVPVVKVAS---GNDHLVMLTADGDLYTL 196
Query: 313 GKNQYGQLG 321
G + GQLG
Sbjct: 197 GCGEQGQLG 205
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V P ++ A G HT+ ++ + ++FG N G GR + +G
Sbjct: 60 PALVSIPEDVVQAEAGGM-HTVCLSKSGQVYSFGCNDEGALGR----DTSVEGSEMVPGK 114
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCL-VRGEIEGE 178
+L+ EK++ G HT LT+ G+V+ G D +G L + + V+ +++
Sbjct: 115 VELQ-EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP 173
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+VK++S D ++ ++ GD++ G E GQ+
Sbjct: 174 -VVKVASGNDHLVMLTADGDLYTLGCGEQGQL 204
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 120 (47.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 27/103 (26%), Positives = 56/103 (54%)
Query: 145 KVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGN 204
+V+S G G +GQ G G + P ++ + + +VK+++ + LA++ + V+ WG+
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKS-LSKKEVVKITAGANHSLALTAQCQVYSWGS 579
Query: 205 SEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLND 247
++GQ+ + P + + G+ R+ DVA+G + +L D
Sbjct: 580 EKFGQLGRMNSPSTVPNLTTVSDGI-RVWDVAAGQTHTLLLAD 621
Score = 118 (46.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 49/195 (25%), Positives = 88/195 (45%)
Query: 98 GQCGRGIVQEEDYQGKWFCHNIAD--LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADG 155
G +G++ +QG +FC + L ++ A G H L L E G+VYS G
Sbjct: 6 GSREKGVLYR--WQG-YFCSVSPEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFG----- 57
Query: 156 QTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ--ISES 213
+ + ++ + G+ ++ +S+ AV++ G V WG + YGQ +S +
Sbjct: 58 EQPWKPVEPPPASLVLESTLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGT 117
Query: 214 EMQIS-TPRVL----SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL-LGQGPKVSR 267
+ S TP + + + R+++VA G L+++ V++WG G LG V
Sbjct: 118 DRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNKHEVWAWGSGCQLGLVTNVFP 177
Query: 268 SMKPTLIPSTLFGQH 282
KP + L G++
Sbjct: 178 VWKPQKVEH-LVGRY 191
Score = 92 (37.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
++ G H +T++ +G NS+GQCG V D + D E ++
Sbjct: 85 VSAGSYHCSAVTEDGLVLMWGENSYGQCG---VSGTDRVPSPTPVTVVDDETHPPQLVRV 141
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
++ CG HTL L+ +V++ WG+ Q GL
Sbjct: 142 LNVACGAQHTLALSNKHEVWA--WGSGCQLGL 171
Score = 90 (36.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQC-KGVSR--IVDV 235
R V+ S++ L S +V+ WG GQ+ + PR+ C K +S+ +V +
Sbjct: 502 RAVRASTSESRNLLPSLFTEVWSWGKGHEGQLGHGDY---LPRLQPLCIKSLSKKEVVKI 558
Query: 236 ASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPS 276
+G + L + VYSWG GQ + R P+ +P+
Sbjct: 559 TAGANHSLALTAQCQVYSWGSEKFGQ---LGRMNSPSTVPN 596
Score = 66 (28.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 65 HPSTQIK--HLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL 122
HP ++ ++A G HT+ +++ + +G+ C G+V + W + L
Sbjct: 134 HPPQLVRVLNVACGAQHTLALSNKHEVWAWGSG----CQLGLVT--NVFPVWKPQKVEHL 187
Query: 123 EGEKIMDAVCGQDHTLFLTE 142
G ++ CG H+L L +
Sbjct: 188 VGRYVVQIACGAFHSLALVQ 207
Score = 50 (22.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 306 FGHLYMWGKNQYGQLGLG 323
F ++ WGK GQLG G
Sbjct: 519 FTEVWSWGKGHEGQLGHG 536
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 135 (52.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/151 (27%), Positives = 75/151 (49%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 509 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHSLA 567
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASG-GSACTMLNDE--- 248
++ K V+ WG++ +GQ+ SE + PR LS+ S + VA+G G + +++ E
Sbjct: 568 LTAKSQVYSWGSNTFGQLGHSEFPTTVPR-LSKVSSESGVWSVAAGHGYSLFLVDTEDFQ 626
Query: 249 -GLVYSWGYGLLGQGPKVSRSMKPTLIPSTL 278
GL YS G +G + + T P L
Sbjct: 627 PGLYYS-GRQDRAEGDTLPENPSGTTTPVLL 656
Score = 108 (43.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG H+ +T++ + +G N+ GQC V + Y + +I+D E +I
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENAAGQCA---VANQQYVSEPSPVSISDSETSPLLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSISREIWA--WGTGCQLGL 182
Score = 105 (42.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 471 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 529
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GGS L + VYSWG GQ +
Sbjct: 530 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ---LG 586
Query: 267 RSMKPTLIP 275
S PT +P
Sbjct: 587 HSEFPTTVP 595
Score = 74 (31.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 484 QVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR- 541
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 542 LQPLCV-KCLDGK-------EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLG 586
Score = 57 (25.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTG----CQLGLITTTFPVTK--PQKVEHLAGRV 202
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 203 VLQVACGAFHSLALVQ 218
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 67/265 (25%), Positives = 111/265 (41%)
Query: 71 KHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDA 130
+ + G H V+T + +T+ N G G + D ++ L+G+ I
Sbjct: 382 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQV 441
Query: 131 VCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCV 190
CG D T+ +T+ G++Y+ G G G+ E ++ + V+ S D
Sbjct: 442 SCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNH 501
Query: 191 LAVSDKG-DVFGWGNSEYGQIS-ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+AV + +V+ WG EYG++ +SE TP+ + K ++ IV V G +L
Sbjct: 502 VAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLN-IVSVHCGCDGTFLLTQT 560
Query: 249 GLVYSWG---YGLLGQGPKVSRSMK-------PTLIPSTLFGQHQFNPKSKVESLIAGPC 298
G V + G + LG S + P TL Q F K+ ++ G
Sbjct: 561 GKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFY---KIRTISPGKT 617
Query: 299 TFGAITNFGHLYMWGKNQYGQLGLG 323
+I G L +G N+ GQLG+G
Sbjct: 618 HTASIDERGRLLTFGSNKCGQLGVG 642
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 4 ITDIACGYGFTVVATKSKDKNLKLFGCG----LNSDSQLGYHDPRKKGNPLELVMSFVRI 59
+ ++CG V T++++ + +GCG L DS+ ++ P+K P L + V +
Sbjct: 492 VEQVSCGDNHVAVLTRNRE--VYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTL--NIVSV 547
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
H L T + NE F QC GI+ + Y + ++
Sbjct: 548 -----HCGCDGTFLLTQTGKVLACGLNE----FNKLGLNQCTSGIINHDTYCEVPYATSL 598
Query: 120 A---DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE 176
L KI G+ HT + E G++ + G GQ G+G L+ G +
Sbjct: 599 TLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLG 658
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G++++++S + +A +D +F WGN G+++
Sbjct: 659 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 693
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKK--GNPLELVMSFVRI 59
+ I + CG T + T++ K+ CGLN ++LG + + + +
Sbjct: 542 LNIVSVHCGCDGTFLLTQTG----KVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATS 597
Query: 60 PLPVKHPST-QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
K S +I+ ++ G+ HT I + TFG+N GQ G G DY+ +
Sbjct: 598 LTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVG-----DYKKHLGINL 652
Query: 119 IAD-LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+A L G++++ CG + T+ T+ +++ G G +G+ +
Sbjct: 653 LAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 694
Score = 119 (46.9 bits), Expect = 0.00079, P = 0.00079
Identities = 62/277 (22%), Positives = 112/277 (40%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCG--RGIVQE--EDYQGKWFCHNIADLEGE 125
I+ ++ G T+ ITD + FG++ +G G + E E Q +F N E
Sbjct: 438 IRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPV----E 493
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ CG +H LT + +VY+ G G G+ GL + TP V + IV +
Sbjct: 494 QVS---CGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVP-KTLNIVSVHC 549
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISES-------------EMQISTPRVLSQCKGVSRI 232
D ++ G V G +E+ ++ + E+ +T L++ +I
Sbjct: 550 GCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKI 609
Query: 233 VDVASGGSACTMLNDEGLVYSWGY---GLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSK 289
++ G + +++ G + ++G G LG G + + L+ L G+
Sbjct: 610 RTISPGKTHTASIDERGRLLTFGSNKCGQLGVGD-YKKHLGINLLAGPLGGKQVIRVSCG 668
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVE 326
E IA T+ H++ WG G+L + E
Sbjct: 669 DEFTIAA-------TDDNHIFAWGNGGNGRLAMTPTE 698
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 150 (57.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 62/231 (26%), Positives = 99/231 (42%)
Query: 116 CHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEI 175
CH L EK++ G H + T SG V+ G G G Q P +
Sbjct: 11 CHM---LHKEKVVCIAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAK- 65
Query: 176 EGERIVKL-SSAVDCVLA-------VSDKGDVFGWGNSEYGQISESEMQISTP-RVLSQC 226
E R+ L +S CVLA ++D G+V+ WG++++GQ++ + P ++ + C
Sbjct: 66 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHC 125
Query: 227 KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNP 286
++ + SG + + G +++WG GQ + R ++ T L Q F P
Sbjct: 126 FQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQ---LGRKLE-TYEGWKLEKQDSFLP 181
Query: 287 KSKV-ESLIAGP-CTFGAIT-------NF----GHLYMWGKNQYGQLGLGT 324
S+ S+ + P C GA N G Y WG N++G G GT
Sbjct: 182 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGT 232
Score = 132 (51.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 40/147 (27%), Positives = 68/147 (46%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HNIADLEGEKIM 128
+A G H + T + F +G CGR + + +F + LE K M
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSRVTGLENSKAM 79
Query: 129 DAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG-----ERIVKL 183
+ G DH+ LT++G+VY WG++ G L N+ V +IE E++ +
Sbjct: 80 CVLAGSDHSASLTDAGEVYV--WGSNKH---GQLANEAAFLPVPQKIEAHCFQNEKVTAI 134
Query: 184 SSAVDCVLAVSDKGDVFGWGNSEYGQI 210
S ++A ++ G +F WG ++YGQ+
Sbjct: 135 WSGWTHLVAQTETGKMFTWGRADYGQL 161
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 132 (51.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 36/137 (26%), Positives = 70/137 (51%)
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+ G +GQ GLG + + L+ +I +LS+ + A++ +G+++ +G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 204 NSEYGQISESEMQISTPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLVYSWG---YGLL 259
E G++ + +V G+S +++ VA GG +L ++ VY++G +G L
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQL 121
Query: 260 GQGPKVSRSMKPTLIPS 276
G G + +P +I S
Sbjct: 122 GLGTFTFETSEPKVIES 138
Score = 121 (47.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 39 GYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFG 98
G + K G P +L+++ ++P V S ++ +A G HT+V+T+ + +TFG FG
Sbjct: 62 GEPESGKLGLPPKLLVNH-KVPQLVPGISEKVIQVACGGGHTVVLTE-KAVYTFGLGQFG 119
Query: 99 QCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
Q G G E + K I ++ +KI CG++HT +T
Sbjct: 120 QLGLGTFTFETSEPKV----IESVKDKKISHVCCGENHTALIT 158
Score = 111 (44.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITD 85
+++ G N++ QLG D ++ + L+ F +H +IK L+ G + +T
Sbjct: 4 QVYATGGNNEGQLGLGDTDER-SAFHLISFFTS-----QH---KIKQLSAGSNTSAALTA 54
Query: 86 NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGK 145
+TFG G+ G +++ I+ EK++ CG HT+ LTE
Sbjct: 55 EGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGIS----EKVIQVACGGGHTVVLTEKA- 109
Query: 146 VYSCGWGADGQTGLG 160
VY+ G G GQ GLG
Sbjct: 110 VYTFGLGQFGQLGLG 124
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 128 (50.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 509 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHSLA 567
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ SE + PR LS+ + + VA+G L D
Sbjct: 568 LTAKSQVYSWGSNTFGQLGHSEFPTTVPR-LSKVSSENGVWSVAAGQDYSLFLVDTEDFQ 626
Query: 249 -GLVYS 253
GL YS
Sbjct: 627 PGLYYS 632
Score = 106 (42.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG H+ +T++ + +G N+ GQC V + Y + +I+D E +I
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENAAGQCA---VANQQYVPEPSPVSISDSETSPSLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSLSREIWA--WGTGCQLGL 182
Score = 105 (42.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 471 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 529
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GGS L + VYSWG GQ +
Sbjct: 530 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ---LG 586
Query: 267 RSMKPTLIP 275
S PT +P
Sbjct: 587 HSEFPTTVP 595
Score = 74 (31.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 484 QVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR- 541
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 542 LQPLCV-KCLDGK-------EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLG 586
Score = 56 (24.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 149 AVRILQLACGEEHTLALSLSREIWAWGTG----CQLGLITTTFPVTK--PQKVEHLAGRV 202
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 203 VLQVACGAFHSLALVQ 218
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 127 (49.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 100 CGRGIVQEEDYQGKWFCHNIA-DLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTG 158
C R V E FC +A +L ++ G +H L L +G+V+S G G GQ G
Sbjct: 142 CARAYVTPEPP----FCQPLAPEL---RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLG 194
Query: 159 LGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQIS 211
G L + P L+ ++G R+ K+++ + +S+ GD++ WG +E GQ++
Sbjct: 195 HGTLEAELEPRLLEA-LQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLA 246
Score = 124 (48.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
R+ +L + VL + G VF WG +GQ+ ++ PR+L +G+ R+ VA+
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGL-RMAKVAA 220
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRS 268
GG L++ G +Y WG+ GQ +RS
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQLALPTRS 251
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/133 (24%), Positives = 60/133 (45%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P +++ L G H +++ F++G GQ G G ++ E + + + L+G
Sbjct: 159 PELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAE-LEPRL----LEALQGL 213
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
++ G H++ L+E+G +Y GW GQ L + E + E E +L+
Sbjct: 214 RMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEN------KAEREEATELNE 267
Query: 186 -AVDCVLAVSDKG 197
+ LAV+D G
Sbjct: 268 DGLKEELAVADAG 280
Score = 65 (27.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 303 ITNFGHLYMWGKNQYGQLG 321
+T G LY WG +YGQLG
Sbjct: 316 VTRTGELYTWGWGKYGQLG 334
Score = 60 (26.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 235 VASGGSACT-MLNDEGLVYSWGYGLLGQ-GPKVSRSM-KPTLIPSTLFGQHQFNPKSKVE 291
+AS GS T ++ G +Y+WG+G GQ G K S S+ +P + F + Q +V
Sbjct: 305 MASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVE--YFVERQL----EVR 358
Query: 292 SLIAGP 297
++ GP
Sbjct: 359 AVTCGP 364
Score = 48 (22.0 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 193 VSDKGDVFGWGNSEYGQISESE 214
V+ G+++ WG +YGQ+ +
Sbjct: 316 VTRTGELYTWGWGKYGQLGHKD 337
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 52/183 (28%), Positives = 86/183 (46%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQ 134
+G A ++ + +++G GQ G G V Q C + L+G++++ G
Sbjct: 509 SGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPR-LQP--LC--VKSLDGKEVIQLSAGG 563
Query: 135 DHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEIEGERIVKLSSAVDCVLAV 193
H+L LT +VYS G GQ LGH N+ T P L + + G+ + ++ D L +
Sbjct: 564 HHSLALTAKSQVYSWGSNIFGQ--LGHTNSPTTVPRLAK--VCGDGVWSTAAGSDYSLFL 619
Query: 194 SDKGDVFGWGNSEYGQISE----SEMQIS-TPRVLSQCKGVSRIVDVASGGSACTMLNDE 248
+D+ D F G GQ + SE S P +L C + I +V +GG C +L D+
Sbjct: 620 ADEED-FQPGLYYCGQETATDNLSENNCSKNPVLLLSCSKIGYISNVIAGGDNCLVLVDK 678
Query: 249 GLV 251
++
Sbjct: 679 NIM 681
Score = 106 (42.4 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+A G H +T+ + +GNNS GQC V + Y + +I+D E ++
Sbjct: 96 VAAGSFHNGAVTEGGVVYMWGNNSSGQCA---VANQPYVPEPQPISISDSETSPLLSVRV 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG+ Q GL
Sbjct: 153 LQLACGEEHTLALSLSREIWA--WGSGCQLGL 182
Score = 102 (41.0 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 152 GADGQTGLGHLNNQETPCLVRGEIEGE-RIVKL----SSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R + R V L S D +L S + +V+ WG +
Sbjct: 472 GGSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLP-SLRTEVWSWGRGK 530
Query: 207 YGQISESEMQISTPRVLSQC-KGVS--RIVDVASGGSACTMLNDEGLVYSWGYGLLGQGP 263
GQ+ ++ PR+ C K + ++ +++GG L + VYSWG + GQ
Sbjct: 531 DGQLGHGDV---LPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQ-- 585
Query: 264 KVSRSMKPTLIP 275
+ + PT +P
Sbjct: 586 -LGHTNSPTTVP 596
Score = 76 (31.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 38/114 (33%), Positives = 55/114 (48%)
Query: 216 QISTPRVLSQCKGVSRIVDVAS----GGSACTMLND-EGLVYSWGYGL---LGQGPKVSR 267
Q+S PR+L + G +++ VA G A +L V+SWG G LG G + R
Sbjct: 485 QVS-PRLLRKV-GRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPR 542
Query: 268 SMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + S L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 543 -LQPLCVKS-LDGK-------EVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG 587
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 120 (47.3 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
R +L + L + G VF WG +GQ+ ++ PR+L +G+ R+ +VA+
Sbjct: 160 RARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGL-RMAEVAA 218
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ 261
GG L++ G +Y WG+ GQ
Sbjct: 219 GGWHSVCLSETGDIYIWGWNESGQ 242
Score = 109 (43.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P+ + + L G H +++ F++G GQ G G ++ E + L+G
Sbjct: 157 PTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEP-----RLLEALQGL 211
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
++ + G H++ L+E+G +Y GW GQ L + E GE G
Sbjct: 212 RMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASG 263
Score = 71 (30.1 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLG--TVEDQPFPLKVAVGGQ 339
+P S+ + G +T G LY WG +YGQLG T D+P ++ V Q
Sbjct: 298 SPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQ 354
Score = 55 (24.4 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 177 GERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE 214
G VK+S ++ G+++ WG +YGQ+ +
Sbjct: 300 GSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKD 337
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 123 (48.4 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G DGQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 509 GEADALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLA 567
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ S+ + PR L++ + + VA+G L D
Sbjct: 568 LTAKSQVYSWGSNTFGQLGHSDFPTTVPR-LAKMNSENGVWSVAAGQDYSLFLVDTEDFQ 626
Query: 249 -GLVYS 253
GL YS
Sbjct: 627 PGLYYS 632
Score = 108 (43.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+ATG H+ +T++ + +G NS GQC V + Y + +I+D E +I
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENSAGQCA---VANQQYVPEPNPVSISDSETSPLLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSISREIWA--WGTGCQLGL 182
Score = 99 (39.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 471 GGTRRLSLPGLLSQVSPRLLRRAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 529
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GG L + VYSWG GQ +
Sbjct: 530 DGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ---LG 586
Query: 267 RSMKPTLIPSTLFGQHQFNPKSKVESLIAG 296
S PT +P + N ++ V S+ AG
Sbjct: 587 HSDFPTTVPRLA----KMNSENGVWSVAAG 612
Score = 73 (30.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 484 QVS-PRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPR- 541
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 542 LQPLCV-KCLDGK-------EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 586
Score = 57 (25.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTG----CQLGLITTTFPVTK--PQKVEHLAGRV 202
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 203 VLQVACGAFHSLALVQ 218
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 124 (48.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 45/196 (22%), Positives = 82/196 (41%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + + L G H +++ F++G GQ G G ++ E + + + L+G
Sbjct: 156 PELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE-LEPRL----LEALQGL 210
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSS 185
+ + G H++ ++E+G +Y GW GQ L N E +GE + + ++
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAE---------DGETVAREAT 261
Query: 186 AVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTML 245
++ D V G +E G + P +L G S V + G ++
Sbjct: 262 ELN-----EDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMG-SDAVKASCGSRHTAVV 315
Query: 246 NDEGLVYSWGYGLLGQ 261
G +Y+WG+G GQ
Sbjct: 316 TRTGELYTWGWGKYGQ 331
Score = 65 (27.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 303 ITNFGHLYMWGKNQYGQLG 321
+T G LY WG +YGQLG
Sbjct: 315 VTRTGELYTWGWGKYGQLG 333
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 126 (49.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+++ G V G++ +GQ+ + P+ + K ++V +A+G G+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHK--EKVVCIAAGLRHAVAATASGI 59
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLI-----PSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+ WG GL G ++ L PS + G SK ++AG ++T+
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLEN----SKAMCVLAGSDHSASLTD 115
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y+WG N++GQL P P K+
Sbjct: 116 AGEVYVWGSNKHGQLA-NEAAFLPVPQKI 143
Score = 121 (47.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T+N + G+NSFGQ G V + +L EK++ G H + T
Sbjct: 1 MLTENGQVLSCGSNSFGQLG---VPHGPR--RCVVPQAIELHKEKVVCIAAGLRHAVAAT 55
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL-SSAVDCVLA-------V 193
SG V+ G G G Q P + E R+ L +S CVLA +
Sbjct: 56 ASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSASL 113
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASG 238
+D G+V+ WG++++GQ++ + P ++ + C ++ + SG
Sbjct: 114 TDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSG 159
Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 23 KNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
+N ++ CG NS QLG H PR+ +P ++ ++ +A G H +
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQAIELHKEKVVCIAAGLRHAV 52
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HNIADLEGEKIMDAVCGQDHT 137
T + F +G CGR + + +F + LE K M + G DH+
Sbjct: 53 AATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 138 LFLTESGKVYSCGWGADGQ 156
LT++G+VY G GQ
Sbjct: 111 ASLTDAGEVYVWGSNKHGQ 129
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 70/292 (23%), Positives = 128/292 (43%)
Query: 2 IKITDIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPL 61
+KI +A T + T + NL F CG +LG D + SFV I
Sbjct: 423 LKIQTLAMSKLHTAILTDDPESNL--FICGFGPGGRLGTGDESTR-------FSFVCIE- 472
Query: 62 PVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQ---EEDYQGKWFCHN 118
+ ++ +A G+ HT+ IT++ F++G+N FGQ G G+ + ++D +
Sbjct: 473 GGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQ 532
Query: 119 IAD-LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGL-----GHLNNQETPCLVR 172
I + + E I+ A H++ + SG +Y+ G +GQ GL L Q TP V
Sbjct: 533 IFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKN-EGQLGLVDSDARSLEVQTTPRRVG 590
Query: 173 GEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKG---- 228
+ I +S+ + +V+ + + Y ++S ++I++ +
Sbjct: 591 ASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRLS-FPLEINSRFIRDSFMATRYD 649
Query: 229 --VSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTL 278
++RIV + SGG+ L+ G V++ L P ++ + P I ++L
Sbjct: 650 TSINRIVKIRSGGNTICALSSSGDVFTVQVNKLENLPSLTSTTNPAKIRNSL 701
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 72/291 (24%), Positives = 127/291 (43%)
Query: 59 IPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHN 118
+P +K +I+ LA + HT ++TD+ + F FG GR +E + + C
Sbjct: 414 LPAFIKARPLKIQTLAMSKLHTAILTDDPESNLF-ICGFGPGGRLGTGDESTRFSFVCIE 472
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLG--HLNNQE------TPCL 170
L +K+ GQDHTL +TE G ++S G GQ G G NN++ +P
Sbjct: 473 GGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQ 532
Query: 171 VRGEIEGERIV-KLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQI---STPRVLSQC 226
+ + E I+ +SAV V+ + FG + G + + +TPR +
Sbjct: 533 IFNPFKKEVILGAAASAVHSVVYSTSGLYTFGKNEGQLGLVDSDARSLEVQTTPRRVGAS 592
Query: 227 KGVSRIVDVASGGSACTML--NDEGLVYS-WGYGLLGQGPKV-SRSMKPTLIPSTLFGQH 282
+ I V++ A +L N E V++ +GY L ++ SR ++ + + +T +
Sbjct: 593 LFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLEINSRFIRDSFM-ATRYDT- 650
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLK 333
N K+ S G T A+++ G ++ N+ L T P ++
Sbjct: 651 SINRIVKIRS---GGNTICALSSSGDVFTVQVNKLENLPSLTSTTNPAKIR 698
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 122 (48.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 36/133 (27%), Positives = 60/133 (45%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
R +L + L + G VF WG +GQ+ ++ PRVL +G+ + +VA+
Sbjct: 165 RARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLP-MAEVAA 223
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPT--LIPSTLFGQHQFNPKSK--VESL 293
GG +++ G +Y WG+ GQ +RS+ I G ++ ++K E
Sbjct: 224 GGWHSVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGDAPGLNEDGSEAKRATEGE 283
Query: 294 IAGPCTFGAITNF 306
GP F A+ F
Sbjct: 284 DGGPTPFIAVQPF 296
Score = 116 (45.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H L L +G+V+S G G GQ G G L + P ++ ++G + ++++ +
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEA-LQGLPMAEVAAGGWHSVC 230
Query: 193 VSDKGDVFGWGNSEYGQIS 211
VS+ GD++ WG +E GQ++
Sbjct: 231 VSETGDIYIWGWNESGQLA 249
Score = 103 (41.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P+ + + L G H +++ F++G GQ G G ++ E + L+G
Sbjct: 162 PTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREP-----RVLEALQGL 216
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG 177
+ + G H++ ++E+G +Y GW GQ L + E + G+ G
Sbjct: 217 PMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGDAPG 268
Score = 65 (27.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 303 ITNFGHLYMWGKNQYGQLG 321
+T G LY WG +YGQLG
Sbjct: 321 VTRTGELYTWGWGKYGQLG 339
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 123 (48.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 34/135 (25%), Positives = 62/135 (45%)
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+++ G V G++ +GQ+ + P+ + K ++V +A+G G+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHK--EKVVCIAAGLRHAVAATASGI 59
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLI-----PSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+ WG GL G ++ L PS + G SK ++AG ++T+
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLEN----SKAMCVLAGSDHSASLTD 115
Query: 306 FGHLYMWGKNQYGQL 320
G +Y+WG N++GQL
Sbjct: 116 AGEVYVWGSNKHGQL 130
Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 140 LTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE--GERIVKLSSAVDCVLAVSDKG 197
LTE+G+V SCG + GQ G+ H + C+V IE E++V +++ + +A + G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
Query: 198 DVFGWGN--SEYGQI---SESEMQISTPRVLSQCKGV--SRIVDVASGGSACTMLNDEGL 250
VF WG + G+ ++ T + S+ G+ S+ + V +G L D G
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 251 VYSWGYGLLGQ 261
VY WG GQ
Sbjct: 119 VYVWGSNKHGQ 129
Score = 110 (43.8 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T+N + G+NSFGQ G V + +L EK++ G H + T
Sbjct: 1 MLTENGQVLSCGSNSFGQLG---VPHGPR--RCVVPQAIELHKEKVVCIAAGLRHAVAAT 55
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL-SSAVDCVLA-------V 193
SG V+ G G G Q P + E R+ L +S CVLA +
Sbjct: 56 ASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSASL 113
Query: 194 SDKGDVFGWGNSEYGQIS 211
+D G+V+ WG++++GQ++
Sbjct: 114 TDAGEVYVWGSNKHGQLA 131
Score = 110 (43.8 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 23 KNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
+N ++ CG NS QLG H PR+ +P ++ ++ +A G H +
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQAIELHKEKVVCIAAGLRHAV 52
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HNIADLEGEKIMDAVCGQDHT 137
T + F +G CGR + + +F + LE K M + G DH+
Sbjct: 53 AATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 138 LFLTESGKVYSCGWGADGQ 156
LT++G+VY G GQ
Sbjct: 111 ASLTDAGEVYVWGSNKHGQ 129
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 126 (49.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 193 VSDKGDVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGL 250
+++ G V G++ +GQ+ + P+ + K ++V +A+G G+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHK--EKVVCIAAGLRHAVAATASGI 59
Query: 251 VYSWGYGLLGQGPKVSRSMKPTLI-----PSTLFGQHQFNPKSKVESLIAGPCTFGAITN 305
V+ WG GL G ++ L PS + G SK ++AG ++T+
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLEN----SKAMCVLAGSDHSASLTD 115
Query: 306 FGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
G +Y+WG N++GQL P P K+
Sbjct: 116 AGEVYVWGSNKHGQLA-NEAAFLPVPQKI 143
Score = 121 (47.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLT 141
++T+N + G+NSFGQ G V + +L EK++ G H + T
Sbjct: 1 MLTENGQVLSCGSNSFGQLG---VPHGPR--RCVVPQAIELHKEKVVCIAAGLRHAVAAT 55
Query: 142 ESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKL-SSAVDCVLA-------V 193
SG V+ G G G Q P + E R+ L +S CVLA +
Sbjct: 56 ASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAK-EPSRVTGLENSKAMCVLAGSDHSASL 113
Query: 194 SDKGDVFGWGNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASG 238
+D G+V+ WG++++GQ++ + P ++ + C ++ + SG
Sbjct: 114 TDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSG 159
Score = 110 (43.8 bits), Expect = 0.00022, P = 0.00022
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 23 KNLKLFGCGLNSDSQLGY-HDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTI 81
+N ++ CG NS QLG H PR+ +P ++ ++ +A G H +
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRR-----------CVVPQAIELHKEKVVCIAAGLRHAV 52
Query: 82 VITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFC----HNIADLEGEKIMDAVCGQDHT 137
T + F +G CGR + + +F + LE K M + G DH+
Sbjct: 53 AATASGIVFQWGTG-LASCGRRLCPGQTLP-LFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 138 LFLTESGKVYSCGWGADGQ 156
LT++G+VY G GQ
Sbjct: 111 ASLTDAGEVYVWGSNKHGQ 129
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 114 (45.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 923 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 981
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
V D G VF +G+ GQ+ + +
Sbjct: 982 LVMD-GQVFTFGSFSKGQLGRPILDV 1006
Score = 90 (36.7 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 659 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 717
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 718 EELDEKDEKSMMCPPG 733
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 105 (42.0 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 50/203 (24%), Positives = 87/203 (42%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +T LTE G++Y G G+ GLG ++ TP V ++ E + ++ +
Sbjct: 422 GVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVI-RLKNEVVSTIACSSTHSAC 480
Query: 193 VSDKGDVFGWGNS-EYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLV 251
++ G ++ WG S E G+I I +P + + R + +GG G +
Sbjct: 481 YTESGKMYVWGQSDETGKIQA----IPSPLPIHSY--LDREIKSPNGGGVGGFFGGGGKI 534
Query: 252 YSWGYG-----LLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNF 306
G +L Q +V P IP L ++ S V +++ G +T+
Sbjct: 535 KQLACGQRCIAVLTQMGEVFMWEIPG-IPIPL--RNALENHS-VRNIVMGNFHLVCLTDS 590
Query: 307 GHLYMWGKNQYGQLGLGTVEDQP 329
G + G+N+ GQLG E++P
Sbjct: 591 GEVVTIGRNKTGQLGRTDAENEP 613
Score = 100 (40.3 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 290 VESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
V+ + G A+T +G LYMWG N++G+LGLG D+ P +V
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRV 460
Score = 96 (38.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 36/159 (22%), Positives = 70/159 (44%)
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESE-MQISTP-RVL 223
+T C + +E + + +++ V A+++ G+++ WG +E+G++ + + TP RV+
Sbjct: 403 QTTCTPK-MVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVI 461
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQ 283
V + +S SAC + G +Y WG + K+ P I S L + +
Sbjct: 462 RLKNEVVSTIACSSTHSAC--YTESGKMYVWGQS--DETGKIQAIPSPLPIHSYLDREIK 517
Query: 284 ----------FNPKSKVESLIAGPCTFGAITNFGHLYMW 312
F K++ L G +T G ++MW
Sbjct: 518 SPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMW 556
Score = 90 (36.7 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 90 FTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSC 149
FTFG+ S G G G + ++ + +++ +++ CG HT+F+T+ +Y C
Sbjct: 4 FTFGHGSNGALGLGKITDDTCPTPQKVNYFTEID-KRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 150 GWGADGQTG 158
G D + G
Sbjct: 63 GIKKDPKHG 71
Score = 79 (32.9 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 42 DPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCG 101
DP P+ + F+ P IK +A G H +++T+ +T+G+NS GQ G
Sbjct: 312 DPNIHFTPIRISTHFLE-----NSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Query: 102 RGIVQEEDYQ 111
+ ++ Q
Sbjct: 367 YLVDTQQQQQ 376
Score = 60 (26.2 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 127 IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL 162
I G H + LTE G V++ WG++ LG+L
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWT--WGSNSNGQLGYL 368
Score = 53 (23.7 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFG 93
++K +A G HT+ +TD+E + G
Sbjct: 39 RVKKVACGSYHTVFVTDDEHLYICG 63
Score = 52 (23.4 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 190 VLAVSDKGDVFGWGNSEYGQISES-EMQISTPRVLSQCKGVSRIVDVASGGS 240
++ +++ G+V+ WG++ GQ+ + Q + L Q + +S + AS S
Sbjct: 345 IVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSASSSS 396
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 229 VSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
++ I VA G +L + G V++WG GQ
Sbjct: 332 LNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQ 364
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 3 KITDIACGYGFTVVATKSKDKNLKLFGCG 31
KITD C V DK +K CG
Sbjct: 18 KITDDTCPTPQKVNYFTEIDKRVKKVACG 46
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 142 (55.0 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 87/314 (27%), Positives = 124/314 (39%)
Query: 33 NSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAFTF 92
+SDS D NP E + IP T I +A G + + +TD EG +
Sbjct: 199 DSDSDSD-SDDNPDLNPHECTPT--AIPSSAFPHGTVIVEVAAGDSSSFALTD-EGQ-VY 253
Query: 93 GNNSFGQCGRGIVQEEDYQGKWFCHNIADL--EGEKIMDAVCGQDHTLFLTESGKVYSCG 150
G +F + GI+ + K L + +KI VCG +H L L + G V S G
Sbjct: 254 GWGTF-RSNDGIL---GFDAKTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWG 309
Query: 151 WGADGQTGLGHLNNQETPCLVRGEIEGER-IVKLSSAVDCVLAVSDKGDVFGWGNSEYGQ 209
G Q G + + L E + IV + + AV G VF WG + +G+
Sbjct: 310 SGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGE 369
Query: 210 IS------ESEMQISTPRVLSQC--KGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+SE I P V+ K V++I A A T + E LV WG L G
Sbjct: 370 TGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQ-DGECLV--WGR-LDGY 425
Query: 262 --GPKVSRSMKPTLI------PSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWG 313
G K+ +I P L + P K +++ AG AI G + WG
Sbjct: 426 QTGLKIDTLPDDAVIKDERDRPRILI-EPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWG 484
Query: 314 KNQYGQLGLGTVED 327
+ Q G GT +D
Sbjct: 485 FSATYQTGQGTQDD 498
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 112 (44.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G+ L + +V++ G G +GQ G G + + P V+ ++G+ ++ L + LA
Sbjct: 514 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKC-LDGKEVIYLEAGGYHSLA 572
Query: 193 VSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDE---- 248
++ K V+ WG++ +GQ+ + + PR L++ + + VA+G L D
Sbjct: 573 LTAKSQVYSWGSNTFGQLGHYDFPTTVPR-LAKVSSENGVWSVAAGQDYSLFLVDTEDFQ 631
Query: 249 -GLVYS 253
GL YS
Sbjct: 632 PGLYYS 637
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 73 LATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE-----KI 127
+A+G H +T++ A+ +G NS GQC V + Y + +I+D E +I
Sbjct: 96 VASGSFHNGAVTESGVAYMWGENSAGQCA---VANQQYVPEPNPVSISDSETSSLLAVRI 152
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGL 159
+ CG++HTL L+ S ++++ WG Q GL
Sbjct: 153 LQLACGEEHTLALSISREIWA--WGTGCQLGL 182
Score = 90 (36.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/129 (24%), Positives = 55/129 (42%)
Query: 152 GADGQTGLGHLNNQETPCLVR--GEIEGERIV---KLSSAVDCVLAVSDKGDVFGWGNSE 206
G + L L +Q +P L+R ++ +V S D +L S + +V+ WG +
Sbjct: 476 GGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLP-SLRTEVWTWGKGK 534
Query: 207 YGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVS 266
GQ+ ++ + +C ++ + +GG L + VYSWG GQ +
Sbjct: 535 EGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQ---LG 591
Query: 267 RSMKPTLIP 275
PT +P
Sbjct: 592 HYDFPTTVP 600
Score = 72 (30.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 216 QISTPRVLSQCKGV-SRIVDVAS--GGSACTMLND-EGLVYSWGYGL---LGQGPKVSRS 268
Q+S PR+L + V +R V + G A +L V++WG G LG G + R
Sbjct: 489 QVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR- 546
Query: 269 MKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
++P + L G+ +V L AG A+T +Y WG N +GQLG
Sbjct: 547 LQPLCV-KCLDGK-------EVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLG 591
Score = 57 (25.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 67 STQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEK 126
+ +I LA G HT+ ++ + + +G C G++ K + L G
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTG----CQLGLITTTFPVTK--PQKVEHLAGRV 202
Query: 127 IMDAVCGQDHTLFLTE 142
++ CG H+L L +
Sbjct: 203 VLQVACGAFHSLALVQ 218
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 112 (44.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ +P LV+ + G + + +
Sbjct: 932 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQA-LPGPSTQVTAGSNHTAV 990
Query: 192 AVSDKGDVFGWGNSEYGQI 210
+ D G VF +G+ GQ+
Sbjct: 991 LLMD-GQVFTFGSFSKGQL 1008
Score = 93 (37.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+T + +TFG N+ GQCGR GK F N+A E +
Sbjct: 674 VTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGRD-TGAMSQAGKAFGVENMATAMDEDLE 732
Query: 129 DAVCGQDHTLFLTESG 144
D + ++ + + G
Sbjct: 733 DELDEKEEKSMMCQPG 748
Score = 88 (36.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 41/132 (31%), Positives = 60/132 (45%)
Query: 203 GNSEYGQISESEMQISTP-RVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGL--- 258
G+SE G S++ P V C+ R V V+ G +L + G VY++GYG
Sbjct: 899 GSSERGDKDASKITTYPPGAVRFDCE--LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 956
Query: 259 LGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYG 318
LG G SR PTL+ + L G P ++V AG + G ++ +G G
Sbjct: 957 LGHGDVNSRG-SPTLVQA-LPG-----PSTQVT---AGSNHTAVLLMDGQVFTFGSFSKG 1006
Query: 319 QLGLGTVEDQPF 330
QLG + D P+
Sbjct: 1007 QLGR-PILDMPY 1017
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 115 (45.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 133 GQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLA 192
G +H L L +G+V+S G G GQ G G L + P L+ ++G + ++++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGGWHSVC 224
Query: 193 VSDKGDVFGWGNSEYGQIS 211
VS+ GD++ WG +E GQ++
Sbjct: 225 VSETGDIYIWGWNESGQLA 243
Score = 111 (44.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQIST-PRVLSQCKGVSRIVDVAS 237
R +L + L + G VF WG +GQ+ ++ PR+L +G+ + +VA+
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLV-MAEVAA 217
Query: 238 GGSACTMLNDEGLVYSWGYGLLGQ 261
GG +++ G +Y WG+ GQ
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQ 241
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGE 125
P + + L G H +++ F++G GQ G G ++ E + + + L+G
Sbjct: 156 PELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE-LEPRL----LEALQGL 210
Query: 126 KIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQET-PCLVRGEI--EGERIVK 182
+ + G H++ ++E+G +Y GW GQ L N E + R E+ +G ++ +
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREELNEDGSQVKR 270
Query: 183 LSSAVD 188
A D
Sbjct: 271 TGGAED 276
Score = 65 (27.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 303 ITNFGHLYMWGKNQYGQLG 321
+T G LY WG +YGQLG
Sbjct: 313 VTRTGELYTWGWGKYGQLG 331
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 220 PRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
P +L G S V + G ++ G +Y+WG+G GQ
Sbjct: 289 PALLDLPMG-SDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ 329
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 114 (45.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 967
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
V D G VF +G+ GQ+ + +
Sbjct: 968 LVMD-GQVFTFGSFSKGQLGRPILDV 992
Score = 90 (36.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 703
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 704 EELDEKDEKSMMCPPG 719
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 112 (44.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 847 CGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAI 905
Query: 192 AVSDKGDVFGWGNSEYGQI 210
+ D G VF +G+ GQ+
Sbjct: 906 LLMD-GQVFTFGSFSKGQL 923
Score = 90 (36.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR GK F N+A E +
Sbjct: 583 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGSMSQGGKGFGVENMATAMDEDLE 641
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 642 EELDEKDEKSMMCPPG 657
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 112 (44.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G ++++ +
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPS-TQVTAGSNHTA 966
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
A+ G VF +G+ GQ+ + +
Sbjct: 967 ALLMDGQVFTFGSFSKGQLGRPILDV 992
Score = 90 (36.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 703
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 704 EELDEKDEKSMMCPPG 719
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/168 (26%), Positives = 82/168 (48%)
Query: 168 PCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRV-LSQC 226
PCLV E E++ ++ D L + G + G++ YGQ+ S+ + V +++
Sbjct: 277 PCLVE-ETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES 335
Query: 227 KGVSRIVDVASG-GSACTMLN-DEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQF 284
+ +A+G G + + N E + SWG+ + ++ R KP +P + G F
Sbjct: 336 P-----ISIAAGLGHSLAICNRGERNILSWGWN---RSRQLGRG-KPENLPREVEG---F 383
Query: 285 NPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPL 332
+ +S S+ AG +T G ++WG + G+LGLG+ D+P P+
Sbjct: 384 DGESPA-SVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPM 430
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 39/152 (25%), Positives = 67/152 (44%)
Query: 60 PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNI 119
P V + + I ++ G H++ +T + + +G N GQ GR IV + + +
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGR-IVIDSSRDSRSEPKRV 132
Query: 120 ADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGH-LNNQETPCLVRGEIEGE 178
LE + A + + + G ++ G GQ GLG+ + P V + E
Sbjct: 133 EGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVEN-LAAE 191
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+VK+S LA++ G VFGWG G++
Sbjct: 192 HVVKVSLGWGHALALTVDGKVFGWGYVADGRV 223
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/173 (26%), Positives = 83/173 (47%)
Query: 119 IADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG- 177
+++L + I G H+L +T SG++++ G +GQ G +++ +EG
Sbjct: 77 VSNLPSD-ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGL 135
Query: 178 ERI-VKLSSAVDCV-LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVS--RIV 233
E + V+ + A V A+ D G ++ WG S+ GQ+ I RV S+ + ++ +V
Sbjct: 136 ENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEA-RVPSRVENLAAEHVV 194
Query: 234 DVASGGSACTMLNDEGLVYSWGY---GLLGQ-GPKVSRSMKPTLIPSTLFGQH 282
V+ G L +G V+ WGY G +G G + S+ ++ ++ G H
Sbjct: 195 KVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHH 247
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 40/168 (23%), Positives = 72/168 (42%)
Query: 106 QEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQ 165
+E D W + + EK+ D CG DH+L L G + S G GQ G +
Sbjct: 267 KENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLG 326
Query: 166 ETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGD--VFGWGNSEYGQISESEMQISTPRVL 223
P + E + +++ + LA+ ++G+ + WG + Q+ + + + PR +
Sbjct: 327 MKPVDIT-----ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPE-NLPREV 380
Query: 224 SQCKGVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKP 271
G S V++G + ++G + WG G G+ S S +P
Sbjct: 381 EGFDGESP-ASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEP 427
Score = 115 (45.5 bits), Expect = 0.00079, P = 0.00079
Identities = 41/163 (25%), Positives = 72/163 (44%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIM 128
++ +A G H++++ + + G+N +GQ GR ++D K D+ E +
Sbjct: 287 KVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRS---KQDLGMK-----PVDIT-ESPI 337
Query: 129 DAVCGQDHTLFLTESGK--VYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSA 186
G H+L + G+ + S GW Q G G N P V G +GE +S+
Sbjct: 338 SIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEG-FDGESPASVSAG 394
Query: 187 VDCVLAVSDKGDVFGWGNSEYGQIS-ESEMQISTPRVLSQCKG 228
L V++KG+ + WG + G++ S P +L +G
Sbjct: 395 RVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEG 437
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 117 (46.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 136 HTLFLTESGKVYSCGWGADGQTGLG-HLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVS 194
H TE G V + G G GQ GLG ++ ++ P LV I E +V+ + + +S
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV--SIP-EDVVQAEAGGMHTVCLS 91
Query: 195 DKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACTMLNDEGLVYSW 254
G V+ +G ++ G + + V + + ++V V++G S L D+G V+ W
Sbjct: 92 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 151
Query: 255 G 255
G
Sbjct: 152 G 152
Score = 116 (45.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 125 EKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIE-GERIVKL 183
E ++ A G HT+ L++SG+VYS G +G LG + E +V G++E E++V++
Sbjct: 75 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG--ALGRDTSVEGSEMVPGKVELQEKVVQV 132
Query: 184 SSAVDCVLAVSDKGDVFGWGN 204
S+ A++D G VF WG+
Sbjct: 133 SAGDSHTAALTDDGRVFLWGS 153
Score = 55 (24.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 232 IVDVASGGSACTMLNDEGLVYSWGYGLLGQ 261
+V VASG ML +G +Y+ G G GQ
Sbjct: 210 VVKVASGNDHLVMLTADGDLYTLGCGEQGQ 239
Score = 41 (19.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 269 MKPTLIPSTLFGQHQFN-PKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLG 321
MK +++P Q Q + P KV S G +T G LY G + GQLG
Sbjct: 195 MKKSMVPV----QVQLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 111 (44.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 822 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 880
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
+ D G VF +G+ GQ+ + +
Sbjct: 881 LLMD-GQVFTFGSFSKGQLGRPILDV 905
Score = 90 (36.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 558 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 616
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 617 EELDEKDEKSMMCPPG 632
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 111 (44.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 967
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
+ D G VF +G+ GQ+ + +
Sbjct: 968 LLMD-GQVFTFGSFSKGQLGRPILDV 992
Score = 90 (36.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 703
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 704 EELDEKDEKSMMCPPG 719
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 111 (44.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 967
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
+ D G VF +G+ GQ+ + +
Sbjct: 968 LLMD-GQVFTFGSFSKGQLGRPILDV 992
Score = 90 (36.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 703
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 704 EELDEKDEKSMMCPPG 719
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 111 (44.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 947 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 1005
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
+ D G VF +G+ GQ+ + +
Sbjct: 1006 LLMD-GQVFTFGSFSKGQLGRPILDV 1030
Score = 90 (36.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 683 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 741
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 742 EELDEKDEKSMMCPPG 757
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 111 (44.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTACSNHTAV 967
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
+ D G VF +G+ GQ+ + I
Sbjct: 968 LLMD-GQVFTFGSFSKGQLGRPILDI 992
Score = 90 (36.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 703
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 704 EELDEKDEKSMMCPPG 719
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 111 (44.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 132 CGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVL 191
CG H++ L E+G VY+ G+G GQ G G +N++ P LV+ + G + + +
Sbjct: 947 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTAGSNHTAV 1005
Query: 192 AVSDKGDVFGWGNSEYGQISESEMQI 217
+ D G VF +G+ GQ+ + +
Sbjct: 1006 LLMD-GQVFTFGSFSKGQLGRPILDV 1030
Score = 90 (36.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWF-CHNIADLEGEKIM 128
+ +A G+AHT V+ N +TFG N+ GQCGR + GK F N+A E +
Sbjct: 683 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRD-TGAMNQGGKGFGVENMATAMDEDLE 741
Query: 129 DAVCGQDHTLFLTESG 144
+ + +D + G
Sbjct: 742 EELDEKDEKSMMCPPG 757
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDN-EGAFTFGNNSFGQ-CGRGIVQE--EDYQGKWF- 115
+ +K +I ++ +G H I + ++ E FT GN+ Q C QE E+ + K+
Sbjct: 190 IDLKDEDIKIINIISGEDHLICLDESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKYVY 249
Query: 116 --CHNIADLEGE-KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLV 171
C++ E K + CG ++T E+ VY G A G G+ +N
Sbjct: 250 PNCYHYTYFGFENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEK 309
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR 231
E+ ++I +L + + + D++ WGN E + E + +P L K +
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGM-EYDDDAYSPLELDFFKKNNY 368
Query: 232 IV-DVASGGSACTMLNDEGLVYSWGYG 257
V ++ G C +L D G ++ WG G
Sbjct: 369 TVKNITCGTDHCLVLTDNGKLFGWGTG 395
Score = 118 (46.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 38/124 (30%), Positives = 54/124 (43%)
Query: 42 DPRKKGN-PLELVMSFVRI-PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQ 99
D R+ G P E +V++ P + + I + G HTI+ T ++ ++FG N G
Sbjct: 11 DKRECGQLPPEYCTDYVQVNPTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGV 70
Query: 100 CGRGIVQE--EDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--G 155
GR +D + N KI CG +HT L E+GKVY G D G
Sbjct: 71 LGRKTYSSGIKDLEHSPTLINFTF--PSKIKKITCGDNHTAILLENGKVYITGGFRDYCG 128
Query: 156 QTGL 159
GL
Sbjct: 129 VLGL 132
Score = 64 (27.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 39/172 (22%), Positives = 72/172 (41%)
Query: 176 EGERIVKLSSAVDCVLAVSDKGD-VFGWGNSEYGQISES--EMQISTPR----VLSQCK- 227
E +I+ + S D ++ + + + +F GNS+ Q+ + E + S + V C
Sbjct: 195 EDIKIINIISGEDHLICLDESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKYVYPNCYH 254
Query: 228 ----GV-SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
G ++ ++ GG+ T + E + +G G G S K +I F +
Sbjct: 255 YTYFGFENKFENIYCGGNN-TYVQLENSLDVYGIGRNAYG-SCGVSSKDNIIKK--FEKI 310
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
Q + K+ L G + N LY+WG + LG+ +D PL++
Sbjct: 311 QELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLEL 360
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 61 LPVKHPSTQIKHLATGRAHTIVITDN-EGAFTFGNNSFGQ-CGRGIVQE--EDYQGKWF- 115
+ +K +I ++ +G H I + ++ E FT GN+ Q C QE E+ + K+
Sbjct: 190 IDLKDEDIKIINIISGEDHLICLDESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKYVY 249
Query: 116 --CHNIADLEGE-KIMDAVCGQDHTLFLTESG-KVYSCGWGADGQTGLGHLNNQETPCLV 171
C++ E K + CG ++T E+ VY G A G G+ +N
Sbjct: 250 PNCYHYTYFGFENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEK 309
Query: 172 RGEIEGERIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSR 231
E+ ++I +L + + + D++ WGN E + E + +P L K +
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGM-EYDDDAYSPLELDFFKKNNY 368
Query: 232 IV-DVASGGSACTMLNDEGLVYSWGYG 257
V ++ G C +L D G ++ WG G
Sbjct: 369 TVKNITCGTDHCLVLTDNGKLFGWGTG 395
Score = 118 (46.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 38/124 (30%), Positives = 54/124 (43%)
Query: 42 DPRKKGN-PLELVMSFVRI-PLPVKHPSTQIKHLATGRAHTIVITDNEGAFTFGNNSFGQ 99
D R+ G P E +V++ P + + I + G HTI+ T ++ ++FG N G
Sbjct: 11 DKRECGQLPPEYCTDYVQVNPTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGV 70
Query: 100 CGRGIVQE--EDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKVYSCGWGAD--G 155
GR +D + N KI CG +HT L E+GKVY G D G
Sbjct: 71 LGRKTYSSGIKDLEHSPTLINFTF--PSKIKKITCGDNHTAILLENGKVYITGGFRDYCG 128
Query: 156 QTGL 159
GL
Sbjct: 129 VLGL 132
Score = 64 (27.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 39/172 (22%), Positives = 72/172 (41%)
Query: 176 EGERIVKLSSAVDCVLAVSDKGD-VFGWGNSEYGQISES--EMQISTPR----VLSQCK- 227
E +I+ + S D ++ + + + +F GNS+ Q+ + E + S + V C
Sbjct: 195 EDIKIINIISGEDHLICLDESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKYVYPNCYH 254
Query: 228 ----GV-SRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQH 282
G ++ ++ GG+ T + E + +G G G S K +I F +
Sbjct: 255 YTYFGFENKFENIYCGGNN-TYVQLENSLDVYGIGRNAYG-SCGVSSKDNIIKK--FEKI 310
Query: 283 QFNPKSKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
Q + K+ L G + N LY+WG + LG+ +D PL++
Sbjct: 311 QELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLEL 360
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 135 (52.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 48/175 (27%), Positives = 83/175 (47%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDN 86
++ GLN+ QL H+ + K E ++ P+K I+H+A G+ HT+++T +
Sbjct: 263 IWATGLNNFKQLA-HETKGK----EFALT------PIKTELKDIRHIAGGQHHTVILTTD 311
Query: 87 EGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTESGKV 146
G +G+ G G V+ D K I EKI+ CG+ + +T GK+
Sbjct: 312 LKCSVVGRPEYGRLGLGDVK--DVVEK---PTIVKKLTEKIVSVGCGEVCSYAVTIDGKL 366
Query: 147 YSCGWGADGQTGLGHLNNQETPCLVRGE-IEGERIVKLSSAVD--CVLAVSDKGD 198
YS G G + Q G+G +++ P +V + +G+ ++ S L +DK D
Sbjct: 367 YSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQD 421
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 90/355 (25%), Positives = 150/355 (42%)
Query: 6 DIACGYGFTVVATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKH 65
DI+ G +V TKS D + FGC N + LG D + G+ + + I LP K
Sbjct: 78 DISAGGMHNLVLTKSGD--IYSFGC--NDEGALG-RDTSEDGSESKPDL----IDLPGKA 128
Query: 66 PSTQIKHLATGRAHTIVITDNEGAFTFGN--NSFGQCGRGIVQEEDYQGKWFCHNIADLE 123
++ G +H+ + ++ F +G+ +S G G I D + I +E
Sbjct: 129 LC-----ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTI----DGNKRT---PIDLME 176
Query: 124 GEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGE-IEGER--- 179
G G DH + LT +GKV++ G GQ LG L+ + + GE G+R
Sbjct: 177 GTVCCSIASGADHLVILTTAGKVFTVGCAEQGQ--LGRLSERS----ISGEGRRGKRDLL 230
Query: 180 -----IVKLSSAVDCVLAV--------SDKGDVFGWGNSEYGQIS-ESE-MQISTPRVLS 224
I+ + + + A S ++ G + + Q++ E++ + + + +
Sbjct: 231 RPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT 290
Query: 225 QCKGVSRIVDVASGGSACTMLNDEGLVYSW-G---YGLLGQGPKVSRSMKPTLIPSTLFG 280
+ K + I +GG T++ L S G YG LG G KPT++
Sbjct: 291 ELKDIRHI----AGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT-- 344
Query: 281 QHQFNPKSKVESLIAGP-CTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
K+ S+ G C++ A+T G LY WG QLG+G +D+ P+ V
Sbjct: 345 -------EKIVSVGCGEVCSY-AVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV 391
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
TD +T+G+N+ G G Q + + ++ G + V + H++FL++
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGS-QNSKHHPELL--DLFSRSGVYVKQVVLCKFHSVFLSQK 195
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+CG G G+ G G P LV G + G ++++A D + ++D G V+ +G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTDDGCVYTFG 254
Query: 204 NSEYGQIS--ESEMQISTPRVLSQ--CKGVSRIVDVASGGSACTMLNDEGLVYSWGY--G 257
+ + Q+ + PR + KG + I+ VA+G + E VY+ G G
Sbjct: 255 LNMFHQLGIIPPPASCNVPRQIQAKYLKGRT-IIGVAAGRFHTVLWTREA-VYTLGLNGG 312
Query: 258 LLG 260
LG
Sbjct: 313 QLG 315
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 64/272 (23%), Positives = 106/272 (38%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 384 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN--DISQPTI---VEALLGYEMVQ 438
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG H L L+ ++++ G G G+ GLG + P LV G+ ++ +D
Sbjct: 439 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMP-PGQEAQRVVCGIDS 497
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT----ML 245
+ ++ G G++ + ++ + + Q V V GSA +L
Sbjct: 498 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQ--QVEEAVTFTPLGSAPLDQEPLL 555
Query: 246 N-DEGLVYSWGYGLLGQGPKV--SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ D G +S S + + + P + G K+ ++ G A
Sbjct: 556 SVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGI----KISTVACGDAFTVA 611
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
I G ++ WGK G+LG ED P V
Sbjct: 612 IGAEGEVFSWGKGARGRLGRKD-EDAGLPRPV 642
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 48/202 (23%), Positives = 85/202 (42%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-GEKI 127
++ +A G +H + ++ F +G G+ G G E + C + + G++
Sbjct: 435 EMVQVACGASHVLALSTERELFAWGRGDGGRLGLGT--RESH----CCPQLVPMPPGQEA 488
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
VCG D ++ LT G+ +CG + GL L+ E P + E L SA
Sbjct: 489 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAP 548
Query: 188 ---DCVLAVSDKGDVFG----WGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
+ +L+V D G + + + ++S P + +G+ +I VA G
Sbjct: 549 LDQEPLLSV-DLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGI-KISTVACGD 606
Query: 240 SACTMLNDEGLVYSWGYGLLGQ 261
+ + EG V+SWG G G+
Sbjct: 607 AFTVAIGAEGEVFSWGKGARGR 628
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 122 LEGEK---IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
LEG+ I CG T LT+ G + + G G++G G G LN+ P +V + G
Sbjct: 376 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL-GY 434
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+V+++ VLA+S + ++F WG + G++
Sbjct: 435 EMVQVACGASHVLALSTERELFAWGRGDGGRL 466
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 64/272 (23%), Positives = 106/272 (38%)
Query: 70 IKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMD 129
IKH+A G T +TD TFG+ S G G G + D + L G +++
Sbjct: 388 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN--DISQPTI---VEALLGYEMVQ 442
Query: 130 AVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDC 189
CG H L L+ ++++ G G G+ GLG + P LV G+ ++ +D
Sbjct: 443 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMP-PGQEAQRVVCGIDS 501
Query: 190 VLAVSDKGDVFGWGNSEYGQISESEMQISTPRVLSQCKGVSRIVDVASGGSACT----ML 245
+ ++ G G++ + ++ + + Q V V GSA +L
Sbjct: 502 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQ--QVEEAVTFTPLGSAPLDQEPLL 559
Query: 246 N-DEGLVYSWGYGLLGQGPKV--SRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGA 302
+ D G +S S + + + P + G K+ ++ G A
Sbjct: 560 SVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGI----KISTVACGDAFTVA 615
Query: 303 ITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKV 334
I G ++ WGK G+LG ED P V
Sbjct: 616 IGAEGEVFSWGKGARGRLGRKD-EDAGLPRPV 646
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 48/202 (23%), Positives = 85/202 (42%)
Query: 69 QIKHLATGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLE-GEKI 127
++ +A G +H + ++ F +G G+ G G E + C + + G++
Sbjct: 439 EMVQVACGASHVLALSTERELFAWGRGDGGRLGLGT--RESH----CCPQLVPMPPGQEA 492
Query: 128 MDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAV 187
VCG D ++ LT G+ +CG + GL L+ E P + E L SA
Sbjct: 493 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAP 552
Query: 188 ---DCVLAVSDKGDVFG----WGNSEYGQISESEMQIS-TPRVLSQCKGVSRIVDVASGG 239
+ +L+V D G + + + ++S P + +G+ +I VA G
Sbjct: 553 LDQEPLLSV-DLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGI-KISTVACGD 610
Query: 240 SACTMLNDEGLVYSWGYGLLGQ 261
+ + EG V+SWG G G+
Sbjct: 611 AFTVAIGAEGEVFSWGKGARGR 632
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 122 LEGEK---IMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGE 178
LEG+ I CG T LT+ G + + G G++G G G LN+ P +V + G
Sbjct: 380 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL-GY 438
Query: 179 RIVKLSSAVDCVLAVSDKGDVFGWGNSEYGQI 210
+V+++ VLA+S + ++F WG + G++
Sbjct: 439 EMVQVACGASHVLALSTERELFAWGRGDGGRL 470
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
TD +T+G+N+ G G Q + + ++ G I V + H++FL++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGS-QNSKHHPELV--DLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+CG G G+ G G P LV G + G ++++A D + +++ G V+ +G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 204 NSEYGQIS--ESEMQISTPRVLSQ--CKGVSRIVDVASGGSACTMLNDEGLVYSWGY--G 257
+ + Q+ + PR + KG + I+ VA+G + E VY+ G G
Sbjct: 255 LNIFHQLGIIPPPSSCNVPRQIQAKYLKGRT-IIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 258 LLG 260
LG
Sbjct: 313 QLG 315
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
TD +T+G+N+ G G Q + + ++ G I V + H++FL++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGS-QNSKHHPELV--DLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+CG G G+ G G P LV G + G ++++A D + +++ G V+ +G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 204 NSEYGQIS--ESEMQISTPRVLSQ--CKGVSRIVDVASGGSACTMLNDEGLVYSWGY--G 257
+ + Q+ + PR + KG + I+ VA+G + E VY+ G G
Sbjct: 255 LNIFHQLGIIPPPSSCNVPRQIQAKYLKGRT-IIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 258 LLG 260
LG
Sbjct: 313 QLG 315
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 68/303 (22%), Positives = 129/303 (42%)
Query: 26 KLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVK---HPSTQIKHLATGRAHTIV 82
+L+G G N ++ LG + ++ +P + + + P +I + + H++V
Sbjct: 150 ELYGFGTNVNNTLGIANGKEPSSPERVFLLKNQTESPTSGQLFSRDKILDVQASKFHSVV 209
Query: 83 ITD--NEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEG--EKIMDAVCGQDHTL 138
+TD ++ + G + G+ G D Q +N + G K++ H+L
Sbjct: 210 LTDEPSQNVYVCGIGAGGRIGFNT----DVQ-----YNFIPIPGIIHKVIQISVSHTHSL 260
Query: 139 FLTESGKVYSCGWGADGQTGLGHLNNQ---ETPCLVR----GEIEGERIVKLSSAVDCVL 191
LT+ G +YS WG +G LG N++ + P + + +I+ +++ +
Sbjct: 261 ALTKFGSIYS--WGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGKSYSV 318
Query: 192 AVSDKGDVFGWG--NSEYGQISESEMQISTPR-VLSQCKGVSRIVDVASGGSACTMLNDE 248
A +D D++ WG N + G IS+ +STPR V V V + + C + N+
Sbjct: 319 AWTDT-DIYSWGLNNGQLG-ISDHISVVSTPRRVAGLLSPVIHAV-CTTRATICLLQNNS 375
Query: 249 GLVY-SWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIAGPCTFGAITNFG 307
+ + ++ L S+K T P +L +FN V L+A +T G
Sbjct: 376 IIAFCNYNQVKLPFNVDFGSSLKVTKHPLSLT---RFN----VRKLLASENKLAVLTELG 428
Query: 308 HLY 310
+Y
Sbjct: 429 EVY 431
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
TD +T+G+N+ G G Q + + ++ G I V + H++FL++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGS-QNSKHHPELV--DLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+CG G G+ G G P LV G + G ++++A D + +++ G V+ +G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 204 NSEYGQIS--ESEMQISTPRVLSQ--CKGVSRIVDVASGGSACTMLNDEGLVYSWGY--G 257
+ + Q+ + PR + KG + I+ VA+G + E VY+ G G
Sbjct: 255 LNIFHQLGLIPPPSSCNVPRQMQAKYLKGRT-IIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 258 LLG 260
LG
Sbjct: 313 QLG 315
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
TD +T+G+N+ G G Q + + ++ G I V + H++FL++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGS-QNSKHHPELV--DLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+CG G G+ G G P LV G + G ++++A D + +++ G V+ +G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 204 NSEYGQIS--ESEMQISTPRVLSQ--CKGVSRIVDVASGGSACTMLNDEGLVYSWGY--G 257
+ + Q+ + PR + KG + I+ VA+G + E VY+ G G
Sbjct: 255 LNIFHQLGIIPPPSSCNVPRQIQAKYLKGRT-IIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 258 LLG 260
LG
Sbjct: 313 QLG 315
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 53/188 (28%), Positives = 88/188 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADL---EGEKIMDAVCGQDHTLFL 140
TD +T+GNN G G Q + + + DL I V + H++FL
Sbjct: 142 TDLTEVYTWGNNINFTLGHGGQQSKHHP------ELVDLFPRNSVYIKQVVLCKFHSVFL 195
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEG---ERIVKLSSAVDCVLAVSDKG 197
+ G++Y+CG G G+ LGH E CLV +EG + ++++A D + +++ G
Sbjct: 196 SHKGQIYTCGHGQGGR--LGH--GDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDG 251
Query: 198 DVFGWGNSEYGQIS--ESEMQISTPRVLSQCKGVS-RIVDVASGGSACTMLNDEGLVYSW 254
V+ +G + + Q+ S PR + Q K + R+V + G T+L + VY+
Sbjct: 252 CVYTFGLNTFHQLGILPPPANCSVPRQV-QAKNLKGRMVIGVAAGRFHTVLWTKEAVYTM 310
Query: 255 GY--GLLG 260
G G LG
Sbjct: 311 GLNGGQLG 318
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 59/245 (24%), Positives = 102/245 (41%)
Query: 16 VATKSKDKNLKLFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLAT 75
V K D +++ G N + LG+ + K +P ELV F R S IK +
Sbjct: 137 VVFKKTDLT-EVYTWGNNINFTLGHGGQQSKHHP-ELVDLFPR-------NSVYIKQVVL 187
Query: 76 GRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQD 135
+ H++ ++ +T G+ G+ G G D Q + L + +D
Sbjct: 188 CKFHSVFLSHKGQIYTCGHGQGGRLGHG-----DEQTCLVPRLVEGLSSHQCSQIAAAKD 242
Query: 136 HTLFLTESGKVYSCGWGADGQTG-LGHLNNQETPCLVRGE-IEGERIVKLSSA-VDCVLA 192
HT+ LTE G VY+ G Q G L N P V+ + ++G ++ +++ VL
Sbjct: 243 HTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLW 302
Query: 193 VSDKGDVFGWGNSEYGQISE--SEMQISTPRVLSQC--KGVS-RIVDVASGGSACTMLND 247
+ G + G + + E ++ PR +S K VS +V + G + C + +
Sbjct: 303 TKEAVYTMGLNGGQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVC--VTE 360
Query: 248 EGLVY 252
G +Y
Sbjct: 361 RGDIY 365
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 132 (51.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 61/238 (25%), Positives = 113/238 (47%)
Query: 122 LEGEKIMDAVCGQDHTLFLTESGKVYSCGWGADGQTGLGHL------NNQE----TPCLV 171
L K+ V GQDHT+ +T+ G++++ WG++ + LG+ ++E P V
Sbjct: 373 LADRKVTQVVLGQDHTMAVTDKGELWT--WGSNAYSQLGYALPPPAKKDEEPMSLAPKQV 430
Query: 172 RGEIEGERIVKLS-SAVDCVLAVSDKGDVFGWGNSEYGQI------SES-EMQISTPRVL 223
G ++ E ++ +S SA+ V ++ VF WG + GQ+ S S E+Q TPR +
Sbjct: 431 FGALKKEVVIGVSASAIHSVAHTTNS--VFCWGKNS-GQLALMDADSRSLEVQ-QTPRKV 486
Query: 224 SQCKGVSRIVDVASGGSACTML--NDEGLVYS-WGYGLLGQGPKVSRSMKPTLI-PSTLF 279
+ + IV V++ A T+L N V++ +GY ++ + P++ + P+ +
Sbjct: 487 AASLFSAPIVMVSAIDKATTVLLANHIVCVFTNYGYNMV-KFPEIDPFATYHISNPAVVL 545
Query: 280 GQHQFNPKS-KVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
G K ++ + +G T A+T G L++ G N + P +K +V
Sbjct: 546 GYDAAASKGQRICHITSGGETIAAVTGRGDLFVMGLNHNADVSSSASTTNPAKIKGSV 603
Score = 46 (21.3 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 75 TGRAHTIVITDNEGAFTFGNNSFGQCGRGIVQEEDY 110
+G A +TD + F+FG+N G G + Y
Sbjct: 239 SGNAGLQDLTDGDELFSFGSNKNMSLGVGDESDRQY 274
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 129 (50.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 51/204 (25%), Positives = 91/204 (44%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV------KHPSTQIKHLATGRAHT 80
+FGC NS++QLG D + P L + + + + K + + H+
Sbjct: 184 VFGC--NSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISKNHS 241
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
+V+T + F+ G S G+ G G+ +Y K+ I + I D +H++ L
Sbjct: 242 VVVTQDGELFSCGVGSRGRLGHGLTDLNNYF-KF--KRIEFFNDKTIKDVAISSNHSIAL 298
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQE----------TPCLVRGEIEG-ERIVKLSSAVDC 189
T +VY+ G + Q G+ ++NN++ TP +V GE+ + I+ + +
Sbjct: 299 TTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIEVSKIH 358
Query: 190 VLAVSDKGDVFGWGNSEYGQISES 213
LA S K + WG + GQ+ S
Sbjct: 359 SLAWS-KNYLCFWGLN-VGQMGIS 380
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 129 (50.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 51/204 (25%), Positives = 91/204 (44%)
Query: 27 LFGCGLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPV------KHPSTQIKHLATGRAHT 80
+FGC NS++QLG D + P L + + + + K + + H+
Sbjct: 184 VFGC--NSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISKNHS 241
Query: 81 IVITDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFL 140
+V+T + F+ G S G+ G G+ +Y K+ I + I D +H++ L
Sbjct: 242 VVVTQDGELFSCGVGSRGRLGHGLTDLNNYF-KF--KRIEFFNDKTIKDVAISSNHSIAL 298
Query: 141 TESGKVYSCGWGADGQTGLGHLNNQE----------TPCLVRGEIEG-ERIVKLSSAVDC 189
T +VY+ G + Q G+ ++NN++ TP +V GE+ + I+ + +
Sbjct: 299 TTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIEVSKIH 358
Query: 190 VLAVSDKGDVFGWGNSEYGQISES 213
LA S K + WG + GQ+ S
Sbjct: 359 SLAWS-KNYLCFWGLN-VGQMGIS 380
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 135 (52.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 84 TDNEGAFTFGNNSFGQCGRGIVQEEDYQGKWFCHNIADLEGEKIMDAVCGQDHTLFLTES 143
TD +T+G+N+ G G Q + + ++ G I V + H++FL++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGS-QNSKHHPELV--DLFSRSGVYIKQVVLCKFHSVFLSQK 195
Query: 144 GKVYSCGWGADGQTGLGHLNNQETPCLVRGEIEGERIVKLSSAVDCVLAVSDKGDVFGWG 203
G+VY+CG G G+ G G P LV G + G ++++A D + +++ G V+ +G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 204 NSEYGQIS--ESEMQISTPRVLSQ--CKGVSRIVDVASGGSACTMLNDEGLVYSWGY--G 257
+ + Q+ + PR + KG + I+ VA+G + E VY+ G G
Sbjct: 255 LNIFHQLGIIPPPSNCNVPRQMQAKYLKGRT-IIGVAAGRFHTVLWTREA-VYTLGLNGG 312
Query: 258 LLG 260
LG
Sbjct: 313 QLG 315
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 256 YGLLGQGPKVSRSMKPTLIPSTLF 279
+ +L PK S PT+ S+LF
Sbjct: 525 FAILQSDPKTSLYEIPTVSSSSLF 548
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 101 (40.6 bits), Expect = 0.00018, P = 0.00018
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 228 GVSRIVDVASGGSACTMLNDEGLVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPK 287
G ++ A G +L ++G VYS+G GP P ++ + L GQ+
Sbjct: 39 GGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSP-ILENALVGQY----- 92
Query: 288 SKVESLIAGPCTFGAITNFGHLYMWGKNQYGQLGLGTVEDQPFPLKVAV 336
V ++ G GA+T+ G YMWG+N GQ + + P P V++
Sbjct: 93 --VITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSI 139
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 50/205 (24%), Positives = 86/205 (41%)
Query: 31 GLNSDSQLGYHDPRKKGNPLELVMSFVRIPLPVKHPSTQIKHLATGRAHTIVITDNEGAF 90
G+ + SQ P + +EL+ F V +IK +A G HT+ I +
Sbjct: 336 GIPTFSQFDEFPPNNQLFEIELLNKFKHEGEDVVR-KREIKKIACGSYHTLAIDKTGEIY 394
Query: 91 TFGNNSFGQCGRGIVQEEDYQG--KWFCH----NIADLEGEKIMDAVCGQDHTLFLT--E 142
FG N FGQ I +Y + H + + K +D C D T F+T +
Sbjct: 395 AFGWNRFGQLALPISYNLEYVSFPRSVTHAFKPHFPGMTNWKCVDIHC-DDETSFVTIRK 453
Query: 143 SGKVYSCGWGADGQTGLGHLNN---QETPC-LVRGEIEGERIVKLSSAVDCVLAVSDK-G 197
G + A G G L N + + C ++ + + +++ S CV +++
Sbjct: 454 PGSTSDHHYFAFGNGLFGELGNNTFKNSQCDPIKIKSDDKKLTNWSCGSHCVFTETEQEN 513
Query: 198 DVFGWGNSEYGQ--ISESEMQISTP 220
+V WGN+++GQ I + M+ + P
Sbjct: 514 EVIAWGNNDHGQLGIGKKTMKCAKP 538
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 191 LAVSDKGDVFGWGNSEYGQISESEMQISTPRVLS-QCKGVSRIVDVASGGSACTMLNDEG 249
LA+++ G+++GWG++ + Q+S ++ S + + Q R+ ++ GG+ + + G
Sbjct: 47 LALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENG 106
Query: 250 LVYSWGYGLLGQGPKVSRSMKPTLIPSTLFGQHQFNPKSKVESLIA-GPCTFGAITNFGH 308
L+Y WG L +G K + S PT + L G + +++A P T
Sbjct: 107 LLYVWG--TLIEGGKCTES--PTKV-DLLKGVTCVSIGINHCAVVADSPTT----PEKRS 157
Query: 309 LYMWGKNQYGQLGLGTVEDQPFPLKVAVGGQ 339
+Y WG N+ GQLG+ P +V +G +
Sbjct: 158 VYTWGTNRKGQLGVVGDSITNAPRRVTLGSK 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 340 340 0.00095 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 216
No. of states in DFA: 613 (65 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 26.58u 0.09s 26.67t Elapsed: 00:00:05
Total cpu time: 26.75u 0.10s 26.85t Elapsed: 00:00:06
Start: Thu Aug 15 15:59:33 2013 End: Thu Aug 15 15:59:39 2013
WARNINGS ISSUED: 1