BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5894
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4MR74|EAF_DROWI Ell-associated factor Eaf OS=Drosophila willistoni GN=Eaf PE=3 SV=1
Length = 539
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 96/133 (72%), Gaps = 10/133 (7%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+AD+L + ++REL+LG++F N ++FHT++YDFKPAS+DPN +A +DVG +NQVTVT
Sbjct: 10 LADRLNIGGEVRELRLGATFNPKNSSTAFHTIKYDFKPASVDPNRMAAVDVGSNNQVTVT 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKTDT 116
VP+ G TV+KG+ + Y KEC++I D TG ITLEKL++NIQ+KKTR ++
Sbjct: 70 VPNLENSGVPHTVYKGNQRKYAKECLMIYDKETGAITLEKLNHNIQVKKTR------SEM 123
Query: 117 SHVMPSAIPLSRL 129
+H PS +P + +
Sbjct: 124 THHKPSFLPATNI 136
>sp|B4J6N6|EAF_DROGR Ell-associated factor Eaf OS=Drosophila grimshawi GN=Eaf PE=3 SV=1
Length = 529
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 94/127 (74%), Gaps = 7/127 (5%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+ ++L L ++RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTVT
Sbjct: 10 LTERLNLGDEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMATVDVGSNNQVTVT 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKTDT 116
VP+ G TV+KG+HK Y KEC++I D TG ITLEKL++NIQ+KKTR+ TNK
Sbjct: 70 VPNLESSGVPHTVYKGNHKKYTKECLIIYDKETGVITLEKLNHNIQVKKTRSEMTNKPS- 128
Query: 117 SHVMPSA 123
+MP+A
Sbjct: 129 --LMPAA 133
>sp|B4KND9|EAF_DROMO Ell-associated factor Eaf OS=Drosophila mojavensis GN=Eaf PE=3 SV=2
Length = 518
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 98/140 (70%), Gaps = 12/140 (8%)
Query: 1 MADKLGLNPD-IRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTV 59
+ ++L + D +RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTV
Sbjct: 10 LTERLNIGGDEVRELKLGATFNPKNTATAFHTIKYDFKPASVDTSRMATVDVGSNNQVTV 69
Query: 60 TVPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKTD 115
TVP+ G +TV+KG+HK Y KEC++I D TG ITLEKL++NIQ+KKTR+ TNK
Sbjct: 70 TVPNLESSGVPQTVYKGNHKKYTKECLIIFDKETGAITLEKLNHNIQVKKTRSEMTNK-- 127
Query: 116 TSHVMPSAIPLSRLKKKTSG 135
PS +P + +SG
Sbjct: 128 -----PSLMPATNAAPMSSG 142
>sp|B4LMA2|EAF_DROVI Ell-associated factor Eaf OS=Drosophila virilis GN=Eaf PE=3 SV=1
Length = 494
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 134/233 (57%), Gaps = 33/233 (14%)
Query: 1 MADKLGLNPD-IRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTV 59
+ ++L + D +RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTV
Sbjct: 10 LTERLNIGGDEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMATVDVGSNNQVTV 69
Query: 60 TVPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK-- 113
TVP+ G +TV+KG+HK Y KEC++I D TG ITLE+L++NIQ+KKTR+ TNK
Sbjct: 70 TVPNLESSGVPQTVYKGNHKKYTKECLIIFDKETGAITLERLNHNIQVKKTRSEVTNKPS 129
Query: 114 --TDTSHVMPSAIPLSRLKKKTSGKA----NNNHKTKSGNNLS-------VPPSIPRHSP 160
+ T+ M + P+ +G A N+ + S +S + PR+SP
Sbjct: 130 LMSATNAPMSNGAPVPSSAAAGTGSAGKLENSTMRISSKTKVSTGSRRNNIIDFKPRNSP 189
Query: 161 L-QTSPSYFSPPHTKSPTAPFKSPSPGQGSSLSPMVNSLPALGL----DDIGL 208
+ Q+SPS P A +SP + +LP++ + DD GL
Sbjct: 190 MQQSSPS--------RPVASHRSPQSAPAWHANNAQQTLPSIPMIMDDDDFGL 234
>sp|Q7JRJ1|EAF_DROME Ell-associated factor Eaf OS=Drosophila melanogaster GN=Eaf PE=1
SV=1
Length = 504
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 133/239 (55%), Gaps = 39/239 (16%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + ++RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTVT
Sbjct: 10 LAERLNIGEEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVT 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKT-- 114
VP+ G TV+KG+ + Y KEC++I D TG IT+EKL++NIQ+KKTR TNK+
Sbjct: 70 VPNSESSGVPHTVYKGNQREYAKECLMIYDKETGAITIEKLNHNIQVKKTRNEVTNKSVQ 129
Query: 115 ------------DTSHVMPSAIPLSRLKKKTSGKANNN-------HKTKSGNNL-SVPPS 154
+ P A+P+ T+ K N+ K +G+ ++
Sbjct: 130 LPGQNMGQPHNQGANGAAPVAVPVPGQGSGTAPKMENSTMRISTKTKVSTGSRRNNIIDF 189
Query: 155 IPRHSPL-QTSPSYFSPPHTKSPTAPFKSPSPGQGSSLSPMVNSLPALGL----DDIGL 208
PR+SP+ Q SPS P H +AP + Q +LP++ L DD GL
Sbjct: 190 KPRNSPMQQNSPSRPVPVHRSPQSAPAWDANNAQ--------QTLPSIPLITDDDDFGL 240
>sp|B4P1N5|EAF_DROYA Ell-associated factor Eaf OS=Drosophila yakuba GN=Eaf PE=3 SV=1
Length = 501
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 90/118 (76%), Gaps = 4/118 (3%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + ++RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTVT
Sbjct: 10 LAERLNIGEEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVT 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKT 114
VP+ G TV+KG+ + Y KEC++I D TG IT+EKL++NIQ+KKTR+ T+K+
Sbjct: 70 VPNSESSGVPHTVYKGNQREYAKECLMIYDKETGAITIEKLNHNIQVKKTRSEVTSKS 127
>sp|B3NA01|EAF_DROER Ell-associated factor Eaf OS=Drosophila erecta GN=Eaf PE=3 SV=2
Length = 508
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 88/118 (74%), Gaps = 4/118 (3%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + ++RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTVT
Sbjct: 10 LAERLNIGEEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVT 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKT 114
VP+ G TV+KG+ + Y KEC++I D TG IT+EKL++NIQ+KKTR NK+
Sbjct: 70 VPNSESSGVPHTVYKGNQREYAKECLMIYDKETGAITIEKLNHNIQVKKTRNEVANKS 127
>sp|B4HQT6|EAF_DROSE Ell-associated factor Eaf OS=Drosophila sechellia GN=Eaf PE=3 SV=1
Length = 503
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 88/118 (74%), Gaps = 4/118 (3%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + + RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTVT
Sbjct: 10 LAERLNIGEEARELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVT 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKT 114
VP+ G TV+KG+ + Y KEC++I D TG IT+EKL++NIQ+KKTR +NK+
Sbjct: 70 VPNSESSGVPHTVYKGNQREYAKECLMIYDKETGAITIEKLNHNIQVKKTRNEVSNKS 127
>sp|B5E1I4|EAF_DROPS Ell-associated factor Eaf OS=Drosophila pseudoobscura pseudoobscura
GN=Eaf PE=3 SV=2
Length = 564
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 88/131 (67%), Gaps = 18/131 (13%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + ++RELKLGS+F N ++FHT++YDFKPAS+D + +A +DVG +NQVTV
Sbjct: 10 LAERLNIGDEVRELKLGSTFNPKNTSTAFHTIKYDFKPASVDTSRMATVDVGSNNQVTVI 69
Query: 61 VPH------------------GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQ 102
VP+ G TV+KG+ + Y KEC++I D TG IT+EKL++NIQ
Sbjct: 70 VPNSELALNVRLLIFGLTESSGVPHTVYKGNQREYAKECLMIYDKETGAITIEKLNHNIQ 129
Query: 103 LKKTRTAPTNK 113
+KKTRT TNK
Sbjct: 130 VKKTRTEVTNK 140
>sp|B4GCP2|EAF_DROPE Ell-associated factor Eaf OS=Drosophila persimilis GN=Eaf PE=3 SV=1
Length = 544
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 88/131 (67%), Gaps = 18/131 (13%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + ++RELKLGS+F N ++FHT++YDFKPAS+D + +A +DVG +NQVTV
Sbjct: 10 LAERLNIGDEVRELKLGSTFNPKNTSTAFHTIKYDFKPASVDTSRMATVDVGSNNQVTVI 69
Query: 61 VPH------------------GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQ 102
VP+ G TV+KG+ + Y KEC++I D TG IT+EKL++NIQ
Sbjct: 70 VPNSELALNVRLLIFGLTESSGVPHTVYKGNQREYAKECLMIYDKETGAITIEKLNHNIQ 129
Query: 103 LKKTRTAPTNK 113
+KKTRT TNK
Sbjct: 130 VKKTRTEVTNK 140
>sp|B3MI72|EAF_DROAN Ell-associated factor Eaf OS=Drosophila ananassae GN=Eaf PE=3 SV=2
Length = 503
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 93/125 (74%), Gaps = 6/125 (4%)
Query: 1 MADKLGLNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVT 60
+A++L + ++RELKLG++F N ++FHT++YDFKPAS+D + +A +DVG +NQVTV
Sbjct: 10 LAERLNIGDEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGPNNQVTVI 69
Query: 61 VPH----GSRETVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKTDT 116
VP+ G TV+KG+ + + KEC++I D TG IT+EKL++NIQ+KKTR+ ++K +
Sbjct: 70 VPNSESSGVPHTVYKGNQREHAKECLMIYDKETGAITIEKLNHNIQVKKTRSEISSK--S 127
Query: 117 SHVMP 121
SH+ P
Sbjct: 128 SHLPP 132
>sp|Q96CJ1|EAF2_HUMAN ELL-associated factor 2 OS=Homo sapiens GN=EAF2 PE=1 SV=1
Length = 260
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 5/106 (4%)
Query: 12 RELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVPH--GSR--E 67
R LKLG SF + +FHT+RYDFKPAS+D + L+VGE QVT+T+P+ GS
Sbjct: 15 RVLKLGESFEKQPR-CAFHTVRYDFKPASIDTSSEGYLEVGEGEQVTITLPNIEGSTPPV 73
Query: 68 TVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK 113
TVFKGS KPY KEC+LII++ TGE LEKLS+NI +KKTR ++K
Sbjct: 74 TVFKGSKKPYLKECILIINHDTGECRLEKLSSNITVKKTRVEGSSK 119
>sp|Q9D4C5|EAF1_MOUSE ELL-associated factor 1 OS=Mus musculus GN=Eaf1 PE=1 SV=2
Length = 268
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 79/104 (75%), Gaps = 5/104 (4%)
Query: 14 LKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVPH--GSRE--TV 69
L+LG SF + +SFHT+RYDFKPAS+D + +L VG+ ++VT+T+PH GS TV
Sbjct: 16 LRLGESFEKRPR-ASFHTIRYDFKPASIDTSCEGELQVGKGDEVTITLPHIPGSTPPMTV 74
Query: 70 FKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK 113
FKG+ +PYQK+CVLII++ TGE LEKLS++IQ+KKTR ++K
Sbjct: 75 FKGNKRPYQKDCVLIINHDTGEYVLEKLSSSIQVKKTRAEGSSK 118
>sp|Q5RAM8|EAF1_PONAB ELL-associated factor 1 OS=Pongo abelii GN=EAF1 PE=2 SV=1
Length = 268
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 79/104 (75%), Gaps = 5/104 (4%)
Query: 14 LKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVPH--GSRE--TV 69
L+LG SF + +SFHT+RYDFKPAS+D + +L VG+ ++VT+T+PH GS TV
Sbjct: 16 LRLGESFEKRPR-ASFHTIRYDFKPASIDTSCEGELQVGKGDEVTITLPHIPGSTPPMTV 74
Query: 70 FKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK 113
FKG+ +PYQK+CVLII++ TGE LEKLS++IQ+KKTR ++K
Sbjct: 75 FKGNKRPYQKDCVLIINHDTGEYVLEKLSSSIQVKKTRAEGSSK 118
>sp|Q96JC9|EAF1_HUMAN ELL-associated factor 1 OS=Homo sapiens GN=EAF1 PE=1 SV=1
Length = 268
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 79/104 (75%), Gaps = 5/104 (4%)
Query: 14 LKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVPH--GSRE--TV 69
L+LG SF + +SFHT+RYDFKPAS+D + +L VG+ ++VT+T+PH GS TV
Sbjct: 16 LRLGESFEKRPR-ASFHTIRYDFKPASIDTSCEGELQVGKGDEVTITLPHIPGSTPPMTV 74
Query: 70 FKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK 113
FKG+ +PYQK+CVLII++ TGE LEKLS++IQ+KKTR ++K
Sbjct: 75 FKGNKRPYQKDCVLIINHDTGEYVLEKLSSSIQVKKTRAEGSSK 118
>sp|Q91ZD6|EAF2_MOUSE ELL-associated factor 2 OS=Mus musculus GN=Eaf2 PE=1 SV=1
Length = 262
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 12 RELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVP--HGSR--E 67
R LKLG SF + +FHT+RYDFKPAS+D + L+VG+ QVT+T+P GS
Sbjct: 15 RVLKLGESFEKQPR-CAFHTVRYDFKPASIDTSCEGNLEVGKGEQVTITLPNIEGSTPPV 73
Query: 68 TVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK 113
TVFKGS +PY KEC+LII++ TGE LEKLS+NI +KKTR +++
Sbjct: 74 TVFKGSKRPYLKECILIINHDTGECRLEKLSSNITVKKTRVEGSSR 119
>sp|Q811X5|EAF2_RAT ELL-associated factor 2 OS=Rattus norvegicus GN=Eaf2 PE=1 SV=1
Length = 262
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 76/106 (71%), Gaps = 5/106 (4%)
Query: 12 RELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVPH--GSR--E 67
R LKLG SF + +FHT+RYDFKPAS+D + L+VG+ QVT+T+P+ GS
Sbjct: 15 RILKLGESFEKQPR-CAFHTVRYDFKPASVDASCEGNLEVGKGEQVTITLPNIEGSTPPV 73
Query: 68 TVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNK 113
TVFKGS +PY KEC+LII++ TGE LEKLS+NI +KKTR ++K
Sbjct: 74 TVFKGSKRPYLKECILIINHDTGECRLEKLSSNITVKKTRGEGSSK 119
>sp|Q5ZHP7|EAF2_CHICK ELL-associated factor 2 OS=Gallus gallus GN=EAF2 PE=2 SV=1
Length = 264
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 5/114 (4%)
Query: 7 LNPDIRELKLGSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVPH--G 64
P R L+LG +F + +FHT+RYDFKPAS+D L+VG+ QVT+T+P+ G
Sbjct: 9 FEPKERVLQLGETFEKQPR-CAFHTVRYDFKPASIDTACEGDLEVGKGEQVTITLPNIEG 67
Query: 65 SRE--TVFKGSHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKTDT 116
S TVFKGS KPY KEC+LII++ TGE LEKLS+NI +KK R ++K +
Sbjct: 68 STPPVTVFKGSKKPYLKECILIINHDTGECRLEKLSSNITVKKIRAEGSSKVQS 121
>sp|A0ZWU1|EAF1_SCHPO Ell1-associated factor 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=eaf1 PE=1 SV=1
Length = 251
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 17 GSSFTNANKGSSFHTLRYDFKPASMDPNEVAKLDVGESNQVTVTVP---HGSRETVFKGS 73
GSSF+ + G +++Y+F P S+DP+ L+ + + +P R +F+GS
Sbjct: 14 GSSFSKNSNG--LLSIKYNFIPESVDPSRRGVLEKAQ-EAYRLRLPSTFDDDRPHIFEGS 70
Query: 74 -HKPYQKECVLIIDNVTGEITLEKLSNNIQL------KKTRTAPTN---KTDTSHVMPS 122
+ +CVLI + T TLE + +L K ++T P+N ++D S + S
Sbjct: 71 CQRARNVDCVLIFNAKTKTFTLEHIDEIARLNALRNPKVSKTVPSNAITQSDNSQISES 129
>sp|Q6C7Q6|GPI7_YARLI GPI ethanolamine phosphate transferase 2 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=LAS21 PE=3 SV=1
Length = 860
Score = 35.8 bits (81), Expect = 0.23, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 73 SHKPYQKECVLIIDNVTGEITLEKLSNNIQLKKTRTAPTNKTDTSHVMPSAIPLSRLKKK 132
+ P+QK ++++D + SN QL K + T+H P + L R+K
Sbjct: 44 TEAPFQKAIIMVVDAFRSDFAFSDQSNCPQLHKRINSGGAIPFTAHSTPPTVTLPRIKGL 103
Query: 133 TSGKANN 139
T+G N
Sbjct: 104 TTGSTPN 110
>sp|Q12112|YN11B_YEAST Transposon Ty1-NL1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-NL1 PE=3 SV=1
Length = 1755
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 140 NHKTKSGNNLSVPPSIPRHSPLQTSPSYFSP-PHTKSPT------APFKSPSPGQGSSLS 192
N SG + PS+ ++P Q SP YF P PH++ P P +PSP G++ +
Sbjct: 94 NQANPSGWSFYGRPSMIPYTPYQMSPMYFPPGPHSQFPQYPSSVGTPLSTPSPESGNTFT 153
>sp|Q99337|YN12B_YEAST Transposon Ty1-NL2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1B-NL2 PE=2 SV=1
Length = 1749
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 153 PSIPRHSPLQTSPSYFSP-PHTKSPT------APFKSPSPGQGSSLS 192
PS+ ++P Q SP YF P PH++ P P +PSP G++ +
Sbjct: 107 PSMIPYTPYQMSPMYFPPGPHSQFPQYPSSVGTPLSTPSPESGNTFT 153
>sp|Q12391|YN11A_YEAST Transposon Ty1-NL1 Gag polyprotein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TY1A-NL1 PE=2 SV=1
Length = 440
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 140 NHKTKSGNNLSVPPSIPRHSPLQTSPSYFSP-PHTKSPT------APFKSPSPGQGSSLS 192
N SG + PS+ ++P Q SP YF P PH++ P P +PSP G++ +
Sbjct: 94 NQANPSGWSFYGRPSMIPYTPYQMSPMYFPPGPHSQFPQYPSSVGTPLSTPSPESGNTFT 153
>sp|Q810L3|CHFR_MOUSE E3 ubiquitin-protein ligase CHFR OS=Mus musculus GN=Chfr PE=1 SV=1
Length = 664
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 81 CVLIIDNVTGEITLEKLSNN------IQLKKTRTAPTNKTDTSHVM 120
C L +D ++GE+TLE S N +Q+ K +T P D +++
Sbjct: 61 CKLTVDEISGEVTLEDTSTNGTVINKLQVVKKQTYPLQSGDIIYLV 106
>sp|P53681|CRK_DAUCA CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1
Length = 602
Score = 30.4 bits (67), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 138 NNNHKTKSGNNLSVPP---SIPRHSPLQTSPSYFSPPHTKSPTAPFKSPSPGQ--GSSLS 192
+N+H + N+ S+PP SIP + PP KSP PF SPSP S S
Sbjct: 15 HNHHTSIPVNDTSLPPQDNSIPPKDIAIPAQDNNKPPGKKSPFLPFYSPSPAHFLFSKKS 74
Query: 193 PMVNSLPALG 202
P V S PA G
Sbjct: 75 PAVGS-PAAG 83
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.126 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,022,822
Number of Sequences: 539616
Number of extensions: 4076165
Number of successful extensions: 15234
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 14105
Number of HSP's gapped (non-prelim): 1154
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)