Your job contains 1 sequence.
>psy5901
MKKPTLLKKLVSLAAVSSGSFALFSGINIYQNNENYYNNVLLPILFKFDAETAHNIAIWT
AKYKLLPKSVYEDPPQLASQVWNLKFPNPLAELRTQKPTEVSIQGPPTVSISGVEPQVPK
PV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5901
(122 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-3157 - symbol:dhodh "dihydroorotate ... 103 5.2e-07 2
MGI|MGI:1928378 - symbol:Dhodh "dihydroorotate dehydrogen... 96 8.7e-06 2
UNIPROTKB|Q5E9W3 - symbol:DHODH "Dihydroorotate dehydroge... 94 1.4e-05 2
UNIPROTKB|Q5ZHY0 - symbol:DHODH "Uncharacterized protein"... 87 3.7e-05 2
UNIPROTKB|G3N1V5 - symbol:G3N1V5 "Uncharacterized protein... 90 0.00021 1
FB|FBgn0000447 - symbol:Dhod "Dihydroorotate dehydrogenas... 98 0.00025 1
UNIPROTKB|F1S3B0 - symbol:F1S3B0 "Uncharacterized protein... 91 0.00055 1
UNIPROTKB|Q02127 - symbol:DHODH "Dihydroorotate dehydroge... 79 0.00069 2
POMBASE|SPAC57A10.12c - symbol:ura3 "dihydroorotate dehyd... 94 0.00076 1
>ZFIN|ZDB-GENE-030131-3157 [details] [associations]
symbol:dhodh "dihydroorotate dehydrogenase"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] HAMAP:MF_00225
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911
PROSITE:PS00912 ZFIN:ZDB-GENE-030131-3157 GO:GO:0016020
Gene3D:3.20.20.70 GO:GO:0006207 GO:GO:0006222 GO:GO:0004158
eggNOG:COG0167 HOGENOM:HOG000225103 KO:K00254 TIGRFAMs:TIGR01036
CTD:1723 HOVERGEN:HBG006898 OrthoDB:EOG47WNNW EMBL:BC086819
IPI:IPI00493178 RefSeq:NP_001008608.1 UniGene:Dr.78743
ProteinModelPortal:Q5PR57 SMR:Q5PR57 STRING:Q5PR57 GeneID:494065
KEGG:dre:494065 InParanoid:Q5PR57 NextBio:20865576
ArrayExpress:Q5PR57 Uniprot:Q5PR57
Length = 407
Score = 103 (41.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 7 LKKLVSLAA--VSSGSFALFSGXXXXXXXXXXXXXVLLPILFKF-DAETAHNIAIWTAKY 63
LKK A + GS ALF G L+P+L +F ETAH +A+
Sbjct: 5 LKKQAKDAVKIIGCGS-ALFLGYLTASGDECFYASALMPVLQRFVGGETAHLMAVRLIGL 63
Query: 64 KLLPKSVYEDPPQLASQVWNLKFPNPL 90
L+P++ Y+DP L V KF NP+
Sbjct: 64 GLVPRNNYKDPTSLEVHVMGRKFQNPV 90
Score = 40 (19.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 89 PLAELRTQKPTEVSI--QGP-PTVSISGV 114
PL EL TQ E+ QG P V + GV
Sbjct: 306 PLKELSTQTVREMYTLTQGKLPIVGVGGV 334
Score = 32 (16.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 99 TEVSIQGPPTVS 110
T + QGPP V+
Sbjct: 355 TALVYQGPPVVN 366
>MGI|MGI:1928378 [details] [associations]
symbol:Dhodh "dihydroorotate dehydrogenase" species:10090
"Mus musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=ISO]
[GO:0004158 "dihydroorotate oxidase activity" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=ISO]
[GO:0006221 "pyrimidine nucleotide biosynthetic process"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0008144 "drug binding" evidence=ISO] [GO:0010181 "FMN binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0048039 "ubiquinone binding"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0090140 "regulation of mitochondrial fission"
evidence=ISO] InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 MGI:MGI:1928378 GO:GO:0016021 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0005743 GO:GO:0043065 GO:GO:0044205
GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167 GO:GO:0090140
HOGENOM:HOG000225103 KO:K00254 OMA:ALNRMGF TIGRFAMs:TIGR01036
CTD:1723 HOVERGEN:HBG006898 GeneTree:ENSGT00500000044924
EMBL:AF029667 EMBL:BC019542 EMBL:BC027829 EMBL:BC045206
IPI:IPI00130733 RefSeq:NP_064430.1 UniGene:Mm.23894
ProteinModelPortal:O35435 SMR:O35435 IntAct:O35435 STRING:O35435
PhosphoSite:O35435 PaxDb:O35435 PRIDE:O35435
Ensembl:ENSMUST00000069058 Ensembl:ENSMUST00000123605 GeneID:56749
KEGG:mmu:56749 UCSC:uc009nip.1 InParanoid:O35435 BindingDB:O35435
ChEMBL:CHEMBL2991 NextBio:313274 Bgee:O35435 CleanEx:MM_DHODH
Genevestigator:O35435 GermOnline:ENSMUSG00000031730 Uniprot:O35435
Length = 395
Score = 96 (38.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 6 LLKKLVSLAAVSSGSFALFSGXXXXXXXXXXXXXVLLPILFKF-DAETAHNIAIWTAKYK 64
L K+ + A + G LF+ L+P L + D E+AH +A+
Sbjct: 6 LRKRALDAAIILGGGGLLFTSYLTATGDDHFYAEYLMPALQRLLDPESAHRLAVRVISLG 65
Query: 65 LLPKSVYEDPPQLASQVWNLKFPNPL 90
LLP++ ++D L +V KF NP+
Sbjct: 66 LLPRATFQDSNMLEVRVLGHKFRNPV 91
Score = 35 (17.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 89 PLAELRTQKPTEVSIQGPPTVSISGV 114
PL +L TQ E+ T+ I GV
Sbjct: 307 PLRDLSTQTIREMYALTQGTIPIIGV 332
>UNIPROTKB|Q5E9W3 [details] [associations]
symbol:DHODH "Dihydroorotate dehydrogenase (quinone),
mitochondrial" species:9913 "Bos taurus" [GO:0044205 "'de novo' UMP
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IEA] [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0016021 Gene3D:3.20.20.70 GO:GO:0005743
GO:GO:0044205 GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167
HOGENOM:HOG000225103 KO:K00254 TIGRFAMs:TIGR01036 EMBL:BT020807
EMBL:BC120337 IPI:IPI00712226 RefSeq:NP_001015650.1 UniGene:Bt.7483
ProteinModelPortal:Q5E9W3 SMR:Q5E9W3 STRING:Q5E9W3 PRIDE:Q5E9W3
GeneID:533873 KEGG:bta:533873 CTD:1723 HOVERGEN:HBG006898
InParanoid:Q5E9W3 OrthoDB:EOG47WNNW SABIO-RK:Q5E9W3
NextBio:20876177 Uniprot:Q5E9W3
Length = 395
Score = 94 (38.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 6 LLKKLVSLAAVSSGSFALFSGXXXXXXXXXXXXXVLLPILFKF-DAETAHNIAIWTAKYK 64
L K+ + G LF+ +L+P L + D ETAH +A+
Sbjct: 6 LKKRAQDAMVILGGGGLLFASYLTATGDEHFYAELLMPSLQRLLDPETAHRLAVRFTSLG 65
Query: 65 LLPKSVYEDPPQLASQVWNLKFPNPL 90
LLP++ ++D L +V KF NP+
Sbjct: 66 LLPRTTFQDSDMLEVRVLGHKFRNPV 91
Score = 35 (17.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 89 PLAELRTQKPTEVSI--QGP-PTVSISGV 114
PL +L TQ E+ QG P V + GV
Sbjct: 307 PLRDLSTQTIREMYALTQGRVPIVGVGGV 335
>UNIPROTKB|Q5ZHY0 [details] [associations]
symbol:DHODH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=TAS] [GO:0006222 "UMP biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0055086 "nucleobase-containing small
molecule metabolic process" evidence=TAS] Reactome:REACT_115655
HAMAP:MF_00225 InterPro:IPR001295 InterPro:IPR005719
InterPro:IPR012135 InterPro:IPR013785 Pfam:PF01180
PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912 GO:GO:0005739
GO:GO:0016020 Gene3D:3.20.20.70 GO:GO:0006206 GO:GO:0006207
GO:GO:0006222 GO:GO:0004158 eggNOG:COG0167 HOGENOM:HOG000225103
KO:K00254 OMA:ALNRMGF TIGRFAMs:TIGR01036 CTD:1723
HOVERGEN:HBG006898 OrthoDB:EOG47WNNW GeneTree:ENSGT00500000044924
EMBL:AADN02054197 EMBL:AJ721004 IPI:IPI00578843
RefSeq:NP_001006131.1 UniGene:Gga.4705 SMR:Q5ZHY0 STRING:Q5ZHY0
Ensembl:ENSGALT00000001163 GeneID:415876 KEGG:gga:415876
InParanoid:Q5ZHY0 NextBio:20819416 Uniprot:Q5ZHY0
Length = 387
Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 7 LKKLVSLAAVSSGSFALFSGXXXXXXXXXXXXXVLLPILFKFDAETAHNIAIWTAKYKLL 66
+++ + L A + G L G ++P L E AH +A+ A LL
Sbjct: 1 MRRRLRLLAAALGGCGLLLGSALAAGDERLYTAAVMPALRVVTPEAAHGLALRAAALGLL 60
Query: 67 PKSVYEDPPQLASQVWNLKFPNPL 90
P + D P L V L+F NPL
Sbjct: 61 PPA-RPDSPSLEVHVLGLRFRNPL 83
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 89 PLAELRTQKPTEVSI--QGP-PTVSISGV 114
PL EL TQ E+ QG P + + GV
Sbjct: 299 PLRELSTQTVREMYALTQGRVPIIGVGGV 327
>UNIPROTKB|G3N1V5 [details] [associations]
symbol:G3N1V5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0004152 "dihydroorotate dehydrogenase activity"
evidence=IEA] InterPro:IPR001295 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PROSITE:PS00911 Gene3D:3.20.20.70
GO:GO:0006207 GO:GO:0006222 GO:GO:0004152
GeneTree:ENSGT00500000044924 EMBL:DAAA02046752
Ensembl:ENSBTAT00000063657 OMA:QCEAVDG Uniprot:G3N1V5
Length = 131
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 16 VSSGSFALFSGXXXXXXXXXXXXXVLLPILFKF-DAETAHNIAIWTAKYKLLPKSVYEDP 74
+ G LF+ +L+P L + D ETAH +A+ LLP++ ++D
Sbjct: 2 ILGGGGLLFASYLTATGDEHFYAELLMPSLQRLLDPETAHRLAVRFTSLGLLPRTTFQDS 61
Query: 75 PQLASQVWNLKFPNPL 90
L +V KF NP+
Sbjct: 62 DMLEVRVLGHKFRNPV 77
>FB|FBgn0000447 [details] [associations]
symbol:Dhod "Dihydroorotate dehydrogenase" species:7227
"Drosophila melanogaster" [GO:0004152 "dihydroorotate dehydrogenase
activity" evidence=ISS;IDA] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=ISS;NAS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS;NAS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 EMBL:AE014297 GO:GO:0016021 Gene3D:3.20.20.70
GO:GO:0005743 GO:GO:0005758 GO:GO:0044205 GO:GO:0006207
GO:GO:0004158 eggNOG:COG0167 GO:GO:0004152 KO:K00254 OMA:ALNRMGF
TIGRFAMs:TIGR01036 EMBL:L00964 EMBL:BT009968 EMBL:BT010096
EMBL:X17297 PIR:JN0500 PIR:S15742 RefSeq:NP_477224.1
RefSeq:NP_599138.3 UniGene:Dm.7901 ProteinModelPortal:P32748
SMR:P32748 DIP:DIP-23907N IntAct:P32748 MINT:MINT-742593
STRING:P32748 PaxDb:P32748 EnsemblMetazoa:FBtr0081890
EnsemblMetazoa:FBtr0300442 GeneID:41022 KEGG:dme:Dmel_CG9741
CTD:41022 FlyBase:FBgn0000447 GeneTree:ENSGT00500000044924
InParanoid:P32748 OrthoDB:EOG43BK4M PhylomeDB:P32748
GenomeRNAi:41022 NextBio:821763 Bgee:P32748 GermOnline:CG9741
Uniprot:P32748
Length = 405
Score = 98 (39.6 bits), Expect = 0.00025, P = 0.00025
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 9 KLVSLAAVSSGSFALFSGXXXXXXXXXXXXXVLLPILFKFDAETAHNIAIWTAKYKLLPK 68
+L SL V+ G AL +G ++P + AE +H +A+ KY+L P
Sbjct: 18 RLRSLGIVTVGGAALVAGITAYKNQDQLFRTFVMPAVRLLPAEASHQLAVLACKYRLCPV 77
Query: 69 SVYEDPPQLASQVWNLKFPNPL 90
S Y D L + + NP+
Sbjct: 78 SQYHDDQNLHTSFFGRMLSNPI 99
>UNIPROTKB|F1S3B0 [details] [associations]
symbol:F1S3B0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001295 InterPro:IPR005719 InterPro:IPR012135
InterPro:IPR013785 Pfam:PF01180 PROSITE:PS00911 GO:GO:0016020
Gene3D:3.20.20.70 GO:GO:0006207 GO:GO:0006222 GO:GO:0004158
TIGRFAMs:TIGR01036 GeneTree:ENSGT00500000044924 EMBL:CU914723
EMBL:AEMK01132674 Ensembl:ENSSSCT00000003043 OMA:LTIRCIS
Uniprot:F1S3B0
Length = 233
Score = 91 (37.1 bits), Expect = 0.00055, P = 0.00055
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 6 LLKKLVSLAAVSSGSFALFSGXXXXXXXXXXXXXVLLPILFKF-DAETAHNIAIWTAKYK 64
L K+ + G LF+ +L+P L D ETAH +AI
Sbjct: 6 LKKRAQDAMVILGGGGLLFASYLTATGDERFYRELLMPALQGLLDPETAHRLAIRFTSLG 65
Query: 65 LLPKSVYEDPPQLASQVWNLKFPNPL 90
LLP++ ++D L +V KF NP+
Sbjct: 66 LLPRATFQDSDMLEVRVLGHKFRNPV 91
>UNIPROTKB|Q02127 [details] [associations]
symbol:DHODH "Dihydroorotate dehydrogenase (quinone),
mitochondrial" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=IEA] [GO:0090140 "regulation of mitochondrial fission"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0007565 "female pregnancy" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0031000
"response to caffeine" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042594 "response to starvation" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0044205 "'de
novo' UMP biosynthetic process" evidence=IEA] [GO:0006207 "'de
novo' pyrimidine nucleobase biosynthetic process" evidence=NAS]
[GO:0005743 "mitochondrial inner membrane" evidence=NAS;TAS]
[GO:0004152 "dihydroorotate dehydrogenase activity"
evidence=NAS;TAS] [GO:0006206 "pyrimidine nucleobase metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0046134 "pyrimidine nucleoside
biosynthetic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PIRSF:PIRSF000164 PROSITE:PS00911 PROSITE:PS00912
UniPathway:UPA00070 GO:GO:0016021 Gene3D:3.20.20.70 GO:GO:0005743
GO:GO:0043065 GO:GO:0044205 GO:GO:0006207 DrugBank:DB01097
DrugBank:DB01117 GO:GO:0046134 GO:GO:0004158 eggNOG:COG0167
GO:GO:0004152 GO:GO:0090140 HOGENOM:HOG000225103 KO:K00254
OMA:ALNRMGF TIGRFAMs:TIGR01036 CTD:1723 HOVERGEN:HBG006898
OrthoDB:EOG47WNNW EMBL:M94065 EMBL:AK292293 EMBL:BC065245
IPI:IPI00024462 PIR:PC1219 RefSeq:NP_001352.2 UniGene:Hs.654427
PDB:1D3G PDB:1D3H PDB:2B0M PDB:2BXV PDB:2FPT PDB:2FPV PDB:2FPY
PDB:2FQI PDB:2PRH PDB:2PRL PDB:2PRM PDB:2WV8 PDB:3F1Q PDB:3FJ6
PDB:3FJL PDB:3G0U PDB:3G0X PDB:3KVJ PDB:3KVK PDB:3KVL PDB:3KVM
PDB:3U2O PDB:3ZWS PDB:3ZWT PDBsum:1D3G PDBsum:1D3H PDBsum:2B0M
PDBsum:2BXV PDBsum:2FPT PDBsum:2FPV PDBsum:2FPY PDBsum:2FQI
PDBsum:2PRH PDBsum:2PRL PDBsum:2PRM PDBsum:2WV8 PDBsum:3F1Q
PDBsum:3FJ6 PDBsum:3FJL PDBsum:3G0U PDBsum:3G0X PDBsum:3KVJ
PDBsum:3KVK PDBsum:3KVL PDBsum:3KVM PDBsum:3U2O PDBsum:3ZWS
PDBsum:3ZWT ProteinModelPortal:Q02127 SMR:Q02127 IntAct:Q02127
STRING:Q02127 PhosphoSite:Q02127 DMDM:56405372 PaxDb:Q02127
PRIDE:Q02127 Ensembl:ENST00000219240 GeneID:1723 KEGG:hsa:1723
UCSC:uc002fbp.3 GeneCards:GC16P072042 HGNC:HGNC:2867 HPA:HPA010123
HPA:HPA011942 MIM:126064 MIM:263750 neXtProt:NX_Q02127 Orphanet:246
PharmGKB:PA27327 InParanoid:Q02127 SABIO-RK:Q02127 BindingDB:Q02127
ChEMBL:CHEMBL1966 EvolutionaryTrace:Q02127 GenomeRNAi:1723
NextBio:6971 Bgee:Q02127 CleanEx:HS_DHODH Genevestigator:Q02127
GermOnline:ENSG00000102967 Uniprot:Q02127
Length = 395
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 6 LLKKLVSLAAVSSGSFALFSGXXXXXXXXXXXXXVLLPILFKF-DAETAHNIAIWTAKYK 64
L K+ + G LF+ L+P L D E+AH +A+
Sbjct: 6 LKKRAQDAVIILGGGGLLFASYLMATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLG 65
Query: 65 LLPKSVYEDPPQLASQVWNLKFPNPL 90
LLP++ ++D L +V KF NP+
Sbjct: 66 LLPRARFQDSDMLEVRVLGHKFRNPV 91
Score = 34 (17.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 89 PLAELRTQKPTEVSI--QGP-PTVSISGV 114
PL +L TQ E+ QG P + + GV
Sbjct: 307 PLRDLSTQTIREMYALTQGRVPIIGVGGV 335
>POMBASE|SPAC57A10.12c [details] [associations]
symbol:ura3 "dihydroorotate dehydrogenase Ura3"
species:4896 "Schizosaccharomyces pombe" [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0006207 "'de novo' pyrimidine
nucleobase biosynthetic process" evidence=IDA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0052888 "dihydroorotate oxidase
(fumarate) activity" evidence=IDA] InterPro:IPR001295
InterPro:IPR005719 InterPro:IPR012135 InterPro:IPR013785
Pfam:PF01180 PROSITE:PS00911 PROSITE:PS00912 UniPathway:UPA00070
PomBase:SPAC57A10.12c GO:GO:0016021 GO:GO:0005739 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:3.20.20.70 GO:GO:0005743
GO:GO:0044205 GO:GO:0006207 GO:GO:0004158 eggNOG:COG0167 KO:K00226
GO:GO:0052888 HOGENOM:HOG000225103 OMA:ALNRMGF TIGRFAMs:TIGR01036
EMBL:X65114 PIR:A46248 RefSeq:NP_593317.1 ProteinModelPortal:P32747
STRING:P32747 PRIDE:P32747 EnsemblFungi:SPAC57A10.12c.1
GeneID:2542781 KEGG:spo:SPAC57A10.12c OrthoDB:EOG4NS6M1
NextBio:20803825 GO:GO:1901004 Uniprot:P32747
Length = 443
Score = 94 (38.1 bits), Expect = 0.00076, P = 0.00076
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 42 LPILFKFDA-ETAHNIAIWTAKYKLLPKSVYEDPPQLASQVWNLKFPNPL 90
+P+ F E +H +AI A + + PK D P LA +VW KF NP+
Sbjct: 69 MPLFHAFTTPEFSHRVAILAASWGITPKDRVADDPSLAVEVWGKKFCNPI 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 122 109 0.00091 102 3 11 22 0.48 30
29 0.41 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 538 (57 KB)
Total size of DFA: 112 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 12.26u 0.07s 12.33t Elapsed: 00:00:04
Total cpu time: 12.27u 0.07s 12.34t Elapsed: 00:00:06
Start: Thu Aug 15 11:18:50 2013 End: Thu Aug 15 11:18:56 2013