BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5902
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53795|HINT_CAEEL Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis
elegans GN=hint-1 PE=4 SV=1
Length = 130
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 9 VCFTDSTVALCWVHGTPPQGN----VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAA 64
+ F D AL + H PQ V R+ L+ +D + ++G LM+ A KVA
Sbjct: 35 IIFEDDE-ALAF-HDVSPQAPIHFLVIPKRRIDMLENAVDSDAA--LIGKLMVTASKVAK 90
Query: 65 KKLIRN-YRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+ + N YRVVVNNG + Q HLHLHVLGGR L WPPG
Sbjct: 91 QLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130
>sp|P49773|HINT1_HUMAN Histidine triad nucleotide-binding protein 1 OS=Homo sapiens
GN=HINT1 PE=1 SV=2
Length = 126
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 51 ILGHLMIVAKKVAAK-KLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHLMIV KK AA L + YR+VVN G + Q H+HLHVLGGR +HWPPG
Sbjct: 73 LLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
>sp|Q5RF69|HINT1_PONAB Histidine triad nucleotide-binding protein 1 OS=Pongo abelii
GN=HINT1 PE=2 SV=3
Length = 126
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 51 ILGHLMIVAKKVAAK-KLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHLMIV KK AA L + YR+VVN G + Q H+HLHVLGGR +HWPPG
Sbjct: 73 LLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
>sp|P62959|HINT1_RAT Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus
GN=Hint1 PE=1 SV=5
Length = 126
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 51 ILGHLMIVAKKVAAK-KLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHLMIV KK AA L R YR+VVN G + Q H+HLHVLGGR ++WPPG
Sbjct: 73 LLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
>sp|P70349|HINT1_MOUSE Histidine triad nucleotide-binding protein 1 OS=Mus musculus
GN=Hint1 PE=1 SV=3
Length = 126
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 51 ILGHLMIVAKKVAAK-KLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHLMIV KK AA L R YR+VVN G + Q H+HLHVLGGR ++WPPG
Sbjct: 73 LLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
>sp|Q9D0S9|HINT2_MOUSE Histidine triad nucleotide-binding protein 2, mitochondrial OS=Mus
musculus GN=Hint2 PE=2 SV=1
Length = 163
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 50 HILGHLMIVAKKVA-AKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHL++VAKK+A A+ L YR+VVN+G Q HLH+HVLGGR L WPPG
Sbjct: 109 QLLGHLLLVAKKIAQAQGLKDGYRLVVNDGKMGAQSVYHLHIHVLGGRQLQWPPG 163
>sp|P80912|HINT1_RABIT Histidine triad nucleotide-binding protein 1 OS=Oryctolagus
cuniculus GN=HINT1 PE=1 SV=2
Length = 126
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 30 VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK-KLIRNYRVVVNNGWEAVQFSGHL 88
V +S++ D + +LGHLMIV KK AA L + YR+VVN G + Q H+
Sbjct: 54 VIPKKHISQISAAEDADE--SLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHV 111
Query: 89 HLHVLGGRPLHWPPG 103
HLHVLGGR ++WPPG
Sbjct: 112 HLHVLGGRQMNWPPG 126
>sp|P62958|HINT1_BOVIN Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1
PE=1 SV=2
Length = 126
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 36 VSKLQQTIDCERLFHILGHLMIVAKKVAAK-KLIRNYRVVVNNGWEAVQFSGHLHLHVLG 94
+S++ D + +LGHLMIV KK AA L + YR+VVN G + Q H+HLHVLG
Sbjct: 60 ISQISAAEDDDE--SLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLG 117
Query: 95 GRPLHWPPG 103
GR ++WPPG
Sbjct: 118 GRQMNWPPG 126
>sp|P73481|YHIT_SYNY3 Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr1234 PE=4 SV=1
Length = 114
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 51 ILGHLMIVAKKVAAKKLIRN-YRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHL++ AK+VAA I + +R+V+NNG E Q HLHLH+LGGRP WPPG
Sbjct: 61 LLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114
>sp|Q9BX68|HINT2_HUMAN Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo
sapiens GN=HINT2 PE=1 SV=1
Length = 163
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 46 ERLFHILGHLMIVAKKVA-AKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
E +LGHL++VAK+ A A+ L YR+V+N+G Q HLH+HVLGGR L WPPG
Sbjct: 105 EEDQQLLGHLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163
>sp|Q8SQ21|HINT2_BOVIN Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos
taurus GN=HINT2 PE=2 SV=1
Length = 163
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 46 ERLFHILGHLMIVAKKVA-AKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
E +LGHL++VAK+ A A+ L YR+V+N+G Q HLH+HVLGGR L WPPG
Sbjct: 105 EEDQQLLGHLLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163
>sp|P42856|ZB14_MAIZE 14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1
Length = 128
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 46 ERLFHILGHLMIVAKKVAAKKLIRN-YRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
ER ILG+L+ VAK VA ++ + + YRVV+N+G Q H+H+H+LGGR ++WPPG
Sbjct: 70 ERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 128
>sp|P32084|Y1390_SYNE7 Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1
Length = 114
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 51 ILGHLMIVAKKVAAKK-LIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
+LGHL++ K +AA++ L YR V+N G Q HLH+H+LGGR L WPPG
Sbjct: 61 LLGHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114
>sp|P42855|ZB14_BRAJU 14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1
Length = 113
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 46 ERLFHILGHLMIVAKKVAAKK-LIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
ER ILG L+ AK VA ++ L +R+V+N+G + Q H+H+H++GGR ++WPPG
Sbjct: 55 ERHIDILGRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113
>sp|O66536|YHIT_AQUAE Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus (strain
VF5) GN=aq_141 PE=4 SV=1
Length = 121
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 51 ILGHLMIVAKKVAA-------KKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWPPG 103
++GH+ VA+K+A + L + YR+V N G +A Q HLHLH++GGR + WPPG
Sbjct: 62 LVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121
>sp|Q23921|PKIA_DICDI Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2
Length = 127
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 42 TIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPLHWP 101
+D E+ +GH+M +A+ K +YR+V+N G Q LH+H+LGGR ++WP
Sbjct: 66 NVDLEKYKESMGHIMSKIHHIASLKGADSYRLVINEGVLGQQSVRWLHIHILGGRQMNWP 125
Query: 102 PG 103
PG
Sbjct: 126 PG 127
>sp|Q9Z863|YHIT_CHLPN HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 OS=Chlamydia
pneumoniae GN=CPn_0488 PE=4 SV=1
Length = 110
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 1 KLFKVENYVCFTDSTVALCWVHGTPPQGNV---FVANRVSKLQQTIDCERLFHILGHLMI 57
K+F+ EN++ D PQ V + + Q I + + + I
Sbjct: 16 KVFENENFIAIKDRF----------PQAPVHLLIIPKKPIPRFQDIPGDEMILMAEAGKI 65
Query: 58 VAKKVAAKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
V + A + YRVV+NNG E Q HLH+H+LGGRPL
Sbjct: 66 VQELAAEFGIADGYRVVINNGAEGGQAVFHLHIHLLGGRPL 106
>sp|Q89AG5|YHIT_BUCBP Uncharacterized HIT-like protein bbp_327 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_327 PE=4
SV=1
Length = 112
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 50 HILGHLMIVAKKVAAK-KLIRN-YRVVVNNGWEAVQFSGHLHLHVLGGRPLH 99
HILG+++ ++ K+A K K+ +N YR+++N Q HLHLH+LGG+ L+
Sbjct: 59 HILGNMLYISIKIAKKFKIDKNGYRLIINCNQHGRQEIQHLHLHLLGGKKLN 110
>sp|P0ACE9|HINT_SHIFL HIT-like protein HinT OS=Shigella flexneri GN=hinT PE=4 SV=1
Length = 119
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 52 LGHLMIVAKKVAAKKLIRN--YRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
LG ++ VA K+A ++ I YR+++N Q H+H+H+LGGRPL
Sbjct: 62 LGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
>sp|P0ACE7|HINT_ECOLI HIT-like protein HinT OS=Escherichia coli (strain K12) GN=hinT PE=1
SV=1
Length = 119
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 52 LGHLMIVAKKVAAKKLIRN--YRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
LG ++ VA K+A ++ I YR+++N Q H+H+H+LGGRPL
Sbjct: 62 LGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
>sp|P0ACE8|HINT_ECO57 HIT-like protein HinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1
Length = 119
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 52 LGHLMIVAKKVAAKKLIRN--YRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
LG ++ VA K+A ++ I YR+++N Q H+H+H+LGGRPL
Sbjct: 62 LGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
>sp|P57438|YHIT_BUCAI Uncharacterized HIT-like protein BU357 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=BU357 PE=4
SV=1
Length = 114
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 51 ILGHLMIVAKKVAAKKLIRN--YRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
I+ H+ +A K+A +K I YR+++N Q +LH+H+LGG+ L
Sbjct: 61 IMSHMFYIAVKIAKQKKINQEGYRIIINCNEYGGQEINYLHMHLLGGKKL 110
>sp|Q9Y4K4|M4K5_HUMAN Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo
sapiens GN=MAP4K5 PE=1 SV=1
Length = 846
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 3 FKVENYVCFTDSTVALCWVHGTPPQGNVFVANRVSKLQQTIDCERLFHILGHLMIVAKKV 62
F++E+ VC DS +A W HG QG F ++ V+ Q+ D R+F +LG
Sbjct: 770 FRIESVVCLQDSVLAF-WKHGM--QGKSFKSDEVT--QEISDETRVFRLLG--------- 815
Query: 63 AAKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGG 95
+ RVVV + H +L++L G
Sbjct: 816 -------SDRVVVLESRPTENPTAHSNLYILAG 841
>sp|Q8BPM2|M4K5_MOUSE Mitogen-activated protein kinase kinase kinase kinase 5 OS=Mus
musculus GN=Map4k5 PE=2 SV=2
Length = 847
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 3 FKVENYVCFTDSTVALCWVHGTPPQGNVFVANRVSKLQQTIDCERLFHILGHLMIV 58
F++E+ VC DS +A W HG QG F ++ V+ Q+ D R+F +LG +V
Sbjct: 771 FRIESVVCLQDSVLAF-WKHGM--QGKSFKSDEVT--QEISDETRVFRLLGSDRVV 821
>sp|P44956|Y961_HAEIN HIT-like protein HI_0961 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0961 PE=1 SV=1
Length = 116
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 52 LGHLMIVAKKVAAKKLIRN--YRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
LG L VA K+A ++ + YR++VN Q HLH+H++GG PL
Sbjct: 62 LGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110
>sp|A1S7A3|ATE_SHEAM Putative arginyl-tRNA--protein transferase OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=ate PE=3
SV=1
Length = 237
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 36 VSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWE 80
++++ D ++ F LG+ + +K+ K+L R Y+++ NGWE
Sbjct: 186 LTQMALAADMDKAFVYLGYQIDANRKMCYKRLYRPYQILTQNGWE 230
>sp|Q8K9I9|YHIT_BUCAP Uncharacterized HIT-like protein BUsg_345 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_345 PE=4
SV=1
Length = 115
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 50 HILGHLMIVAKKVAAKKLIRN--YRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
+I H++ +A K+A K I Y++V+N Q +LH+H+LGG L
Sbjct: 61 NIFAHMLYIAVKIAKNKKISEDGYKIVMNCNKNGGQEINYLHMHLLGGEKL 111
>sp|Q0HVY7|ATE_SHESR Putative arginyl-tRNA--protein transferase OS=Shewanella sp.
(strain MR-7) GN=ate PE=3 SV=1
Length = 238
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 30 VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQ 83
+ + R++KLQ ++ F LG+ + +K++ K+L R Y+++ GWE Q
Sbjct: 188 ILLQCRLAKLQ-----DKEFLYLGYQIDANRKMSYKRLYRPYQILTPQGWEYSQ 236
>sp|A0KW19|ATE_SHESA Putative arginyl-tRNA--protein transferase OS=Shewanella sp.
(strain ANA-3) GN=ate PE=3 SV=1
Length = 238
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 30 VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQ 83
+ + R++KLQ ++ F LG+ + +K++ K+L R Y+++ GWE Q
Sbjct: 188 ILLQCRLAKLQ-----DKEFLYLGYQIDANRKMSYKRLYRPYQILTPQGWEYSQ 236
>sp|Q0HJP1|ATE_SHESM Putative arginyl-tRNA--protein transferase OS=Shewanella sp.
(strain MR-4) GN=ate PE=3 SV=1
Length = 238
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 30 VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQ 83
+ + R++KLQ ++ F LG+ + +K++ K+L R Y+++ GWE Q
Sbjct: 188 ILLQCRLAKLQ-----DKEFLYLGYQIDANRKMSYKRLYRPYQILTPQGWEYSQ 236
>sp|P26724|YHIT_AZOBR Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region
OS=Azospirillum brasilense PE=4 SV=1
Length = 122
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 26 PQGNVFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQFS 85
P+G + S + LF +G VA+ A + YR++ N G +A Q
Sbjct: 48 PKGAYVDMDDFSARATEAEIAGLFRAVGE---VARGAGAAE--PGYRILSNCGEDANQEV 102
Query: 86 GHLHLHVLGGRPL 98
HLH+HV GR L
Sbjct: 103 PHLHIHVFAGRRL 115
>sp|A4Y7L3|ATE_SHEPC Putative arginyl-tRNA--protein transferase OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=ate PE=3
SV=1
Length = 235
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 30 VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWE 80
+ + R++KLQ+ + F LG+ + +K++ K+L R Y+++ GWE
Sbjct: 188 ILIQCRLAKLQR-----KEFLYLGYQIDANRKMSYKRLYRPYQILTPQGWE 233
>sp|Q8EDW7|ATE_SHEON Putative arginyl-tRNA--protein transferase OS=Shewanella oneidensis
(strain MR-1) GN=ate PE=3 SV=1
Length = 238
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 30 VFVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQ 83
+ + R++KLQ + F LG+ + +K++ K+L R Y+++ + GWE Q
Sbjct: 188 ILLQCRLAKLQG-----KAFLYLGYQIDANRKMSYKRLYRPYQILTHQGWEYSQ 236
>sp|Q5RBX0|ZNF7_PONAB Zinc finger protein 7 OS=Pongo abelii GN=ZNF7 PE=2 SV=1
Length = 686
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 22 HGTPPQGNVFVA----NRVSKLQQTIDCERLFHILGHLMI 57
+G +G++FV+ N + KL Q DCE++F HL+I
Sbjct: 612 YGNALEGSIFVSRKKVNTIKKLHQCEDCEKIFRWRSHLII 651
>sp|Q9ZDL1|YHIT_RICPR Uncharacterized HIT-like protein RP317 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP317 PE=4 SV=1
Length = 120
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 45 CERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGRPL 98
+ + H + +A + K+ YR++ N G ++ Q H H H++GG+ L
Sbjct: 61 IDEIKHFFSKIADIANEAGLDKV--GYRLITNKGEKSGQTIFHFHFHIIGGKKL 112
>sp|P17097|ZNF7_HUMAN Zinc finger protein 7 OS=Homo sapiens GN=ZNF7 PE=1 SV=1
Length = 686
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 22 HGTPPQGNVFVA----NRVSKLQQTIDCERLFHILGHLMI 57
+G +G+ FV+ N + KL Q DCE++F HL+I
Sbjct: 612 YGNALEGSTFVSRKKVNTIKKLHQCEDCEKIFRWRSHLII 651
>sp|Q04344|HNT1_YEAST Hit family protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HNT1 PE=1 SV=2
Length = 158
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 52 LGHLMIVAKKVAAKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGR 96
L M +AK++A + Y V+ NNG A Q H+H H++ R
Sbjct: 79 LTDAMPIAKRLAKAMKLDTYNVLQNNGKIAHQEVDHVHFHLIPKR 123
>sp|Q11066|YHI2_MYCTU Uncharacterized HIT-like protein Rv1262c/MT1300 OS=Mycobacterium
tuberculosis GN=Rv1262c PE=4 SV=2
Length = 144
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 58 VAKKVAAKKLIRNYRVVVNNGWEAVQFSGHLHLHVLGGR 96
+A+ A KL + +N+G A Q H+HLHVL R
Sbjct: 67 IARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPR 105
>sp|O94586|HNT1_SCHPO Hit family protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hnt1 PE=3 SV=1
Length = 133
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 55 LMIVAKKVAAKKLIRNYRVVVNNGWEAVQFSGHLHLHVL 93
++ + KKV NY V+ NNG A QF H+H H++
Sbjct: 60 ILPLVKKVTKAIGPENYNVLQNNGRIAHQFVDHVHFHII 98
>sp|O07817|HITA_NEIGO Protein HitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1
Length = 107
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 51 ILGHLMIVAKKVA-AKKLIRNYRVVVNNGWEAVQFSGHLHLHVLG 94
+LG +M+ ++A A L ++ ++N G Q HLH+H++G
Sbjct: 60 LLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIMG 104
>sp|Q8BR76|MKS3_MOUSE Meckelin OS=Mus musculus GN=Tmem67 PE=1 SV=2
Length = 992
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 6 ENYVCFTDSTVALCWVHG--TPPQ--GNVFVANRVSKLQQTIDCERLFHIL 52
E + + +T A CW H T Q GN+ V N S T+D RLFH +
Sbjct: 224 EWFAKYLQATAAACWTHANLTSCQALGNMCVMNMNSYDSTTLDACRLFHYI 274
>sp|Q6ZRR7|LRRC9_HUMAN Leucine-rich repeat-containing protein 9 OS=Homo sapiens GN=LRRC9
PE=2 SV=2
Length = 1453
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 31 FVANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNN----GWEAVQFSG 86
F N ++K++ C L + ++K K+ + R+ +NN GWE F
Sbjct: 916 FSNNNLTKMEGLESCINLEELTLDGNCISKIEGISKMTKLTRLSINNNLLTGWEEHTFDN 975
Query: 87 HLHLHVL 93
LHLH L
Sbjct: 976 MLHLHSL 982
>sp|P0C152|MKS3_RAT Meckelin OS=Rattus norvegicus GN=Tmem67 PE=1 SV=1
Length = 992
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 6 ENYVCFTDSTVALCWVHG--TPPQ--GNVFVANRVSKLQQTIDCERLFH 50
E + + +T A CW H T Q GN+ V N S T D RLFH
Sbjct: 224 EWFTKYLQATAAACWTHSNLTSCQALGNMCVMNMNSYDSTTFDACRLFH 272
>sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3
Length = 2959
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 80 EAVQFSGHLHLHVLGGRP 97
+AVQ SGH H+H L G P
Sbjct: 2800 DAVQISGHFHIHHLLGNP 2817
>sp|A2CG49|KALRN_MOUSE Kalirin OS=Mus musculus GN=Kalrn PE=1 SV=1
Length = 2964
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 80 EAVQFSGHLHLHVLGGRP 97
+AVQ SGH H+H L G P
Sbjct: 2799 DAVQISGHFHIHHLLGNP 2816
>sp|O60229|KALRN_HUMAN Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2
Length = 2985
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 80 EAVQFSGHLHLHVLGGRP 97
+AVQ SGH H+H L G P
Sbjct: 2826 DAVQISGHFHIHHLLGNP 2843
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,676,571
Number of Sequences: 539616
Number of extensions: 1227299
Number of successful extensions: 3504
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3455
Number of HSP's gapped (non-prelim): 52
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)