Query psy5902
Match_columns 103
No_of_seqs 174 out of 1067
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 21:14:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1c_A Histidine triad nucleot 100.0 3.6E-33 1.2E-37 187.1 9.1 94 5-103 28-126 (126)
2 3n1s_A HIT-like protein HINT; 100.0 1.5E-31 5.3E-36 177.8 9.5 93 5-102 16-114 (119)
3 3oj7_A Putative histidine tria 100.0 9.2E-31 3.1E-35 173.0 10.7 93 5-102 20-116 (117)
4 4egu_A Histidine triad (HIT) p 100.0 3.6E-29 1.2E-33 165.6 9.1 92 5-101 17-114 (119)
5 1xqu_A HIT family hydrolase; p 100.0 1.4E-28 4.7E-33 169.5 10.0 93 5-102 48-146 (147)
6 1fit_A FragIle histidine prote 99.9 1.5E-26 5E-31 158.0 9.2 90 3-100 10-107 (147)
7 3ksv_A Uncharacterized protein 99.9 4.5E-26 1.5E-30 156.9 10.2 85 5-97 24-116 (149)
8 3o0m_A HIT family protein; ssg 99.9 3E-25 1E-29 152.2 8.4 85 5-97 18-111 (149)
9 3imi_A HIT family protein; str 99.9 2.4E-25 8.2E-30 152.4 7.8 85 5-97 22-114 (147)
10 3lb5_A HIT-like protein involv 99.9 4.1E-25 1.4E-29 153.9 8.4 85 5-97 41-133 (161)
11 2eo4_A 150AA long hypothetical 99.9 1.9E-24 6.5E-29 147.8 9.3 85 5-97 12-104 (149)
12 3l7x_A SMU.412C, putative HIT- 99.9 1.5E-24 5.2E-29 152.8 8.5 85 5-97 49-141 (173)
13 3r6f_A HIT family protein; str 99.9 3E-24 1E-28 145.1 8.6 81 5-96 17-102 (135)
14 1y23_A HIT, histidine triad pr 99.9 2.5E-24 8.5E-29 146.2 6.3 85 5-97 18-110 (145)
15 3ano_A AP-4-A phosphorylase; d 99.9 4.7E-23 1.6E-27 150.0 8.8 88 5-97 83-176 (218)
16 1ems_A Nitfhit, NIT-fragIle hi 99.9 3.4E-22 1.2E-26 155.5 9.1 89 4-100 307-403 (440)
17 3p0t_A Uncharacterized protein 99.9 4.2E-22 1.4E-26 134.6 8.4 81 5-98 18-106 (138)
18 2oik_A Histidine triad (HIT) p 99.8 1.2E-20 4E-25 129.7 9.4 81 4-97 18-106 (154)
19 3ohe_A Histidine triad (HIT) p 99.8 2.4E-20 8.3E-25 126.8 8.0 79 6-97 13-99 (137)
20 3i24_A HIT family hydrolase; s 99.8 4.7E-20 1.6E-24 127.2 7.9 79 6-97 13-99 (149)
21 3nrd_A Histidine triad (HIT) p 99.8 8.9E-19 3E-23 118.7 7.9 79 6-97 15-101 (135)
22 1z84_A Galactose-1-phosphate u 99.8 2.9E-18 9.8E-23 131.7 10.6 84 8-97 227-320 (351)
23 1gup_A Galactose-1-phosphate u 99.7 2.8E-17 9.5E-22 125.9 11.0 81 6-94 210-301 (348)
24 3sp4_A Aprataxin-like protein; 99.7 9.9E-18 3.4E-22 120.9 4.7 88 4-96 16-126 (204)
25 3i4s_A Histidine triad protein 99.7 1.3E-16 4.5E-21 109.9 7.9 78 6-97 18-104 (149)
26 3bl9_A Scavenger mRNA-decappin 99.0 1.8E-09 6E-14 81.7 9.2 85 3-96 148-248 (301)
27 1vlr_A MRNA decapping enzyme; 98.9 3.3E-09 1.1E-13 81.5 8.8 84 4-96 196-295 (350)
28 1z84_A Galactose-1-phosphate u 97.6 0.00026 8.7E-09 54.1 8.4 75 12-94 86-191 (351)
29 1gup_A Galactose-1-phosphate u 87.2 1.4 4.8E-05 33.1 6.1 56 33-94 113-171 (348)
30 3vg8_G Hypothetical protein TT 84.4 1 3.5E-05 29.2 3.4 25 68-93 76-100 (116)
31 2pof_A CDP-diacylglycerol pyro 80.9 2.7 9.2E-05 30.3 4.9 77 8-93 33-120 (227)
32 1omh_A TRWC protein; protein-D 22.7 31 0.0011 25.4 1.3 8 86-93 158-165 (293)
No 1
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=100.00 E-value=3.6e-33 Score=187.14 Aligned_cols=94 Identities=41% Similarity=0.719 Sum_probs=89.3
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh-hCCCceEEEEecCc
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK-KLIRNYRVVVNNGW 79 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~-~~~~g~~i~~n~G~ 79 (103)
++.+|||||.++| |+|++|.+|||+ |+|++++.||+++|. +++++|+.++++++++ ..++|||+++|+|+
T Consensus 28 ~~~iv~e~e~~~a---f~d~~P~~pgH~LViPk~H~~~l~dL~~~e~--~~l~~l~~~~~~~~~~~~~~~g~ni~~n~g~ 102 (126)
T 3o1c_A 28 PAKIIFEDDQALA---FHDISPQAPTHFLVIPKKHISQISAAEDADE--SLLGHLMIVGKKCAADLGLKKGYRMVVNEGS 102 (126)
T ss_dssp CCCEEEECSSEEE---EECSSCSSSEEEEEEESSCCCCGGGCCGGGH--HHHHHHHHHHHHHHHHTTCTTCEEEECCCHH
T ss_pred cCCEEEECCCEEE---EECCCCCCCceEEEEechHhchHhhCchhHH--HHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 4689999999999 999999999999 999999999999988 8999999999999987 55679999999999
Q ss_pred cCCCCcceeeeeeEcCCCCCCCCC
Q psy5902 80 EAVQFSGHLHLHVLGGRPLHWPPG 103 (103)
Q Consensus 80 ~agQ~V~HlHlHvip~~~~~~~~g 103 (103)
.|||+|+|+|+|||||++++||||
T Consensus 103 ~agq~v~HlH~Hiipr~~~~~~~~ 126 (126)
T 3o1c_A 103 DGGQSVYHVHLHVLGGRQMNWPPG 126 (126)
T ss_dssp HHTCCSSSCCEEEEESSCCCSSCC
T ss_pred ccCCccCEeEEEEeCCcccCCCCC
Confidence 999999999999999999999998
No 2
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.97 E-value=1.5e-31 Score=177.82 Aligned_cols=93 Identities=26% Similarity=0.390 Sum_probs=87.8
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh-hC-CCceEEEEecC
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK-KL-IRNYRVVVNNG 78 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~-~~-~~g~~i~~n~G 78 (103)
++.+|||||.++| |+|++|.+|||+ |+|++++.||+++|. ..+++|+..+++++++ .+ ++|||+++|+|
T Consensus 16 ~~~iv~ede~~~a---f~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~--~~l~~l~~~~~~v~~~~~~~~~g~ni~~n~g 90 (119)
T 3n1s_A 16 PSDIVYQDDLVTA---FRDISPQAPTHILIIPNILIPTVNDVSAEHE--QALGRMITVAAKIAEQEGIAEDGYRLIMNTN 90 (119)
T ss_dssp CCCEEEECSSEEE---EECSSCSSSEEEEEEESSCCCSGGGCCGGGH--HHHHHHHHHHHHHHHHTTCTTTCEEEEEEEH
T ss_pred cCCEEEECCCEEE---EECCCCCCCCeEEEEehhHhCCHhHcCHHHH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEeCC
Confidence 4689999999999 999999999999 999999999999988 8899999999999998 66 68999999999
Q ss_pred ccCCCCcceeeeeeEcCCCCCCCC
Q psy5902 79 WEAVQFSGHLHLHVLGGRPLHWPP 102 (103)
Q Consensus 79 ~~agQ~V~HlHlHvip~~~~~~~~ 102 (103)
+.|||+|+|+|+|||||++++|..
T Consensus 91 ~~agq~V~HlH~Hiipr~~~~~~~ 114 (119)
T 3n1s_A 91 RHGGQEVYHIHMHLLGGRPLGPML 114 (119)
T ss_dssp HHHTCCSSSCCEEEEESSCCCCSS
T ss_pred CCcCCCcCEEEEEEeCCcccCccc
Confidence 999999999999999999999864
No 3
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.97 E-value=9.2e-31 Score=173.02 Aligned_cols=93 Identities=25% Similarity=0.441 Sum_probs=87.4
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHhhCCCceEEEEecCcc
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKLIRNYRVVVNNGWE 80 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~~~~~g~~i~~n~G~~ 80 (103)
++.+|||||.++| |+|++|.+|||+ |+|++++.||+++|. +++.+|+.++++++++.+++|||+++|+|+.
T Consensus 20 ~~~iv~e~~~~~a---f~d~~P~~pgH~LViPk~H~~~l~dL~~~e~--~~l~~l~~~~~~~~~~~~~~g~ni~~n~g~~ 94 (117)
T 3oj7_A 20 PSTIVYEDDEIFA---FKDINPIAPIHILVIPKQHIASLNEITEENE--AFIGKVLYKVSLIGKKECPEGYRVVNNIGED 94 (117)
T ss_dssp CCCEEEECSSEEE---EECSSCSSSEEEEEEESSCCCSGGGCCTTTH--HHHHHHHHHHHHHHHHHCTTCEEEECCCSTT
T ss_pred CCCEEEECCcEEE---EECCCCCCCceEEEEechHhCCHHHCCHHHH--HHHHHHHHHHHHHHHhcCCCCeEEEEcCCCC
Confidence 4689999999999 999999999999 999999999999988 8999999999999887554599999999999
Q ss_pred CCCCcceeeeeeEcCCCCCCCC
Q psy5902 81 AVQFSGHLHLHVLGGRPLHWPP 102 (103)
Q Consensus 81 agQ~V~HlHlHvip~~~~~~~~ 102 (103)
|||+|+|+|+|||||++++||+
T Consensus 95 agq~v~H~H~Hiipr~~~~~~~ 116 (117)
T 3oj7_A 95 AGQTVKHIHFHILGGKKLAWDK 116 (117)
T ss_dssp TTCCSSSCCEEEEESSCCCCCC
T ss_pred CCeeeeEEEEEEeCCCCCCCCC
Confidence 9999999999999999999985
No 4
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.96 E-value=3.6e-29 Score=165.63 Aligned_cols=92 Identities=26% Similarity=0.346 Sum_probs=85.8
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh-hC-CCceEEEEecC
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK-KL-IRNYRVVVNNG 78 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~-~~-~~g~~i~~n~G 78 (103)
++.+|||||.++| |+|++|.+|||+ |+|++++.+|+++|. +.+.+|+.++++++++ ++ ++|||+++|+|
T Consensus 17 ~~~iv~e~e~~~a---f~d~~P~~pgH~LViPk~H~~~l~dL~~~e~--~~l~~~~~~~~~~~~~~~~~~~~~ni~~n~g 91 (119)
T 4egu_A 17 PSTKVYEDDRVLA---FNDLNPVAPYHILVVPKKHYDSLIDIPDKEM--DIVSHIHVVINKIAKEKGFDQTGFRVINNCG 91 (119)
T ss_dssp CCCEEEECSSEEE---EECSSCSSSEEEEEEESSCCSSGGGSCGGGT--HHHHHHHHHHHHHHHHHTHHHHCEEEEEEET
T ss_pred CCCEEEECCCEEE---EECCCCCCCceEEEEechhhCCHhHCCHhHH--HHHHHHHHHHHHHHHHhCCCCCCEEEEEeCC
Confidence 4689999999999 999999999999 999999999999988 8999999999999987 55 57999999999
Q ss_pred ccCCCCcceeeeeeEcCCCCCCC
Q psy5902 79 WEAVQFSGHLHLHVLGGRPLHWP 101 (103)
Q Consensus 79 ~~agQ~V~HlHlHvip~~~~~~~ 101 (103)
+.|||+|+|+|+|||||++++|.
T Consensus 92 ~~agq~v~HlH~Hiip~~~~~~~ 114 (119)
T 4egu_A 92 SDGGQEVKHLHYHILAGKKLPNY 114 (119)
T ss_dssp TTTTCCSCSCCEEEEESSCCCCG
T ss_pred CCCCCCcCEEEEEEeCCcccCcc
Confidence 99999999999999999998863
No 5
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.95 E-value=1.4e-28 Score=169.50 Aligned_cols=93 Identities=25% Similarity=0.343 Sum_probs=87.7
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh-hC-CCceEEEEecC
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK-KL-IRNYRVVVNNG 78 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~-~~-~~g~~i~~n~G 78 (103)
++.+|||||.++| |+|++|.+|||+ |+|++++.||+++|. +.+.+|+.++++++++ .. ++|||+++|+|
T Consensus 48 ~~~iV~e~e~~~a---f~d~~P~~pgH~LViPkrHv~~l~dL~~~e~--~~l~~l~~~~~~v~~~~~~~~~gyni~~n~g 122 (147)
T 1xqu_A 48 PSTIYYEDERVIA---IKDINPAAPVHVLIIPKEHIANVKEINESNA--QILIDIHKAANKVAEDLGIAEKGYRLITNCG 122 (147)
T ss_dssp CBCEEEECSSEEE---EECSSCSSSEEEEEEESSCCSSGGGCCTTTT--THHHHHHHHHHHHHHHTTCTTTCEEEECCCS
T ss_pred CcEEEEECCcEEE---EEecCCCCccEEEEEeCcccCChhHCCHHHH--HHHHHHHHHHHHHHHHhCCCCCCEEEEEecC
Confidence 4689999999999 999999999999 999999999999888 8899999999999988 55 57999999999
Q ss_pred ccCCCCcceeeeeeEcCCCCCCCC
Q psy5902 79 WEAVQFSGHLHLHVLGGRPLHWPP 102 (103)
Q Consensus 79 ~~agQ~V~HlHlHvip~~~~~~~~ 102 (103)
+.|||+|+|+|+|||||++++||+
T Consensus 123 ~~aGq~v~HlHlHiiP~~~~~wp~ 146 (147)
T 1xqu_A 123 VAAGQTVFHLHYHLLGGVDMGPKI 146 (147)
T ss_dssp TTTTCCSCSCCEEEEESSCCCSCC
T ss_pred cccCCCccEEEEEEeCCCcCCCCC
Confidence 999999999999999999999985
No 6
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.94 E-value=1.5e-26 Score=158.05 Aligned_cols=90 Identities=20% Similarity=0.207 Sum_probs=79.8
Q ss_pred CcCccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEE
Q psy5902 3 FKVENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVV 74 (103)
Q Consensus 3 ~~~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~ 74 (103)
++++.+|||||.++| |+|++|.+|||+ |+|+.++.+|++++ +.+|+..+++++++ .+ ++|||++
T Consensus 10 ip~~~iv~e~~~~~a---~~d~~p~~pgh~LViPk~h~~~~~dL~~~e-----~~~l~~~~~~v~~~l~~~~~~~~~ni~ 81 (147)
T 1fit_A 10 IKPSVVFLKTELSFA---LVNRKPVVPGHVLVCPLRPVERFHDLRPDE-----VADLFQTTQRVGTVVEKHFHGTSLTFS 81 (147)
T ss_dssp ECGGGEEEECSSEEE---EECSSCSSTTCEEEEESSCCSSGGGSCHHH-----HHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCcEEEEECCCEEE---EECCCCCCCcEEEEEEccccCChhhCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 567899999999999 999999999999 99999999999865 47788888888776 34 5799999
Q ss_pred EecCccCCCCcceeeeeeEcCCCCCC
Q psy5902 75 VNNGWEAVQFSGHLHLHVLGGRPLHW 100 (103)
Q Consensus 75 ~n~G~~agQ~V~HlHlHvip~~~~~~ 100 (103)
+|+|+.+||+|+|+|+|||||....|
T Consensus 82 ~n~g~~agq~v~HlH~HiiPr~~~d~ 107 (147)
T 1fit_A 82 MQDGPEAGQTVKHVHVHVLPRKAGDF 107 (147)
T ss_dssp ECCSGGGTCCSSSCCEEEEEECTTC-
T ss_pred EecCCccCCCccEEEEEEECCcCCCC
Confidence 99999999999999999999977654
No 7
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.93 E-value=4.5e-26 Score=156.90 Aligned_cols=85 Identities=20% Similarity=0.156 Sum_probs=77.3
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
++.+|||||.++| |+|++|.+|||+ |+|+.++.||++++ +.+|+.++++++++ .+ ++|||+++|
T Consensus 24 p~~iV~ed~~~~a---f~d~~P~~pgH~LViPk~H~~~l~dL~~~e-----~~~l~~~~~~v~~~l~~~~~~~g~ni~~n 95 (149)
T 3ksv_A 24 PCAKVAETSKALA---FMDINPLSRGHMLVIPKEHASCLHELGMED-----AADVGVLLAKASRAVAGPDGSMQYNVLQN 95 (149)
T ss_dssp CCCEEEECSSEEE---EECSSCSSTTCEEEEESSCCSSGGGSCHHH-----HHHHHHHHHHHHHHHHCTTSCCEEEEEEC
T ss_pred CccEEEECCCEEE---EECCCCCCCCEEEEEeChhhhhhhhCCHHH-----HHHHHHHHHHHHHHHHHhhCCCCEEEEEe
Confidence 5789999999999 999999999999 99999999999865 58888899988887 34 579999999
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
+|+.+||+|+|+|+|||||..
T Consensus 96 ~g~~aGq~v~HlHiHiiPR~~ 116 (149)
T 3ksv_A 96 NGSLAHQEVPHVHFHIIPKTD 116 (149)
T ss_dssp CSTTTTCCSSSCCEEEEEECC
T ss_pred cCcccCCCCCEEEEEEEeccc
Confidence 999999999999999999753
No 8
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.92 E-value=3e-25 Score=152.18 Aligned_cols=85 Identities=19% Similarity=0.230 Sum_probs=76.1
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---h-C-CCceEEEE
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---K-L-IRNYRVVV 75 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~-~-~~g~~i~~ 75 (103)
+..+|||||.++| |+|++|.+|||+ |+|+.++.+|++++ +.+|+..+++++++ . + ++|||+++
T Consensus 18 ~~~iv~e~~~~~a---f~d~~p~~pgh~lViPk~H~~~l~dl~~~~-----~~~l~~~~~~v~~~l~~~~~~~~~~ni~~ 89 (149)
T 3o0m_A 18 PAIRIYEDENFLG---ILDIRPFTRGHTLVIPKTHTVDLTDTPPET-----VAGMAAVGQRIARAARESGLHADGNNIAI 89 (149)
T ss_dssp CCCEEEECSSEEE---EECSSCSSTTCEEEEESSCCCSTTTSCHHH-----HHHHHHHHHHHHHHHHHSTTCCSEEEEEC
T ss_pred CCCEEEECCCEEE---EEcCCCCCCCeEEEEechhhCCHhHCCHHH-----HHHHHHHHHHHHHHHHHcCCCCCceEEEE
Confidence 4689999999999 999999999999 99999999999865 57788888887775 3 5 68999999
Q ss_pred ecCccCCCCcceeeeeeEcCCC
Q psy5902 76 NNGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 76 n~G~~agQ~V~HlHlHvip~~~ 97 (103)
|+|+.+||+|+|+|+|||||..
T Consensus 90 n~g~~aGq~v~HlHiHiiPR~~ 111 (149)
T 3o0m_A 90 NDGKAAFQTVFHIHLHVVPRRN 111 (149)
T ss_dssp CCSGGGTCCSSSCCEEEEEECT
T ss_pred ecCCCCCCccceEEEEEECCcc
Confidence 9999999999999999999853
No 9
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.92 E-value=2.4e-25 Score=152.40 Aligned_cols=85 Identities=18% Similarity=0.144 Sum_probs=76.5
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
+..+|||||.++| |+|++|.+|||+ |+|++++.||++++ +.+|+..+++++++ .+ ++|||+++|
T Consensus 22 ~~~iV~e~~~~~a---~~d~~p~~pgh~lViPk~H~~~l~dL~~~e-----~~~l~~~~~~v~~~l~~~~~~~~~ni~~n 93 (147)
T 3imi_A 22 LCSKVYEDEHVLA---FLDISQVTKGHTLVIPKVHKQDIFALTPEI-----ASHIFSVVPKIANAIKAEFNPVGFNLLNN 93 (147)
T ss_dssp CCCEEEECSSEEE---EECTTCSSTTCEEEEESSCCCSGGGCCHHH-----HHHHHHTHHHHHHHHHHHHCCSEEEEEEE
T ss_pred cCCEEEECCCEEE---EEcCCCCCCcEEEEEEeeccCChhhCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4689999999999 999999999999 99999999999865 47888888888776 34 589999999
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
+|+.+||+|+|+|+|||||..
T Consensus 94 ~g~~aGq~v~HlHiHiiPR~~ 114 (147)
T 3imi_A 94 NGEKAGQTVFHFHLHLIPRYG 114 (147)
T ss_dssp ESGGGTCCSSSCCEEEEEECS
T ss_pred CCcccCCCcCEEEEEEeCCcc
Confidence 999999999999999999865
No 10
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.92 E-value=4.1e-25 Score=153.86 Aligned_cols=85 Identities=19% Similarity=0.128 Sum_probs=76.7
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
+..+|||||.++| |+|++|.+|||+ |+|+.++.||++++ +.+|+..+++++++ .+ ++|||+++|
T Consensus 41 p~~iV~e~e~~~a---f~d~~P~~pgH~LViPk~H~~~l~dL~~ee-----~~~l~~~~~~v~~~l~~~~~~~g~ni~~n 112 (161)
T 3lb5_A 41 PSVRVYEDDDVIA---FMDIMPQAPGHTLVIPKKGSRNLLDADTET-----LFPVIKAVQKIAKAVKKAFQADGITVMQF 112 (161)
T ss_dssp CCCEEEECSSEEE---EECSSCSSTTCEEEEESSCCSSTTTSCHHH-----HHHHHHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CccEEEECCCEEE---EECCCcCCCcEEEEEEeeccchhhhCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4689999999999 999999999999 99999999999865 58888888888876 34 589999999
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
+|+.+||+|+|+|+|||||..
T Consensus 113 ~g~~aGq~V~HlHiHiiPR~~ 133 (161)
T 3lb5_A 113 NEAASQQTVYHLHFHIIPRME 133 (161)
T ss_dssp ESGGGTCCSCSCCEEEEEECT
T ss_pred cCcccCCCCCEEEEEEEcccC
Confidence 999999999999999999854
No 11
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.91 E-value=1.9e-24 Score=147.81 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=76.0
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
++.+|||||.++| |+|++|.+|||+ |+|+.++.+|++++ +.+|+..+++++++ .+ ++|||+++|
T Consensus 12 ~~~iv~e~~~~~a---~~d~~p~~pgh~lViPk~H~~~~~dL~~~e-----~~~l~~~~~~v~~~l~~~~~~~~~ni~~n 83 (149)
T 2eo4_A 12 EGYFVYEDEKFAA---ILDKYPVSLGHTLVIPKKHFENYLEADEDT-----LAELAKVVKLVSLGIKDAVKADGLRLLTN 83 (149)
T ss_dssp CCCEEEECSSEEE---EECSSCSSTTCEEEEESSCCSSGGGSCHHH-----HHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CccEEEECCCEEE---EECCCCCCCCeEEEEechhhCCHhHCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 4689999999999 999999999998 99999999999965 47788888888776 34 579999999
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
+|+.+||+|+|+|+|||||..
T Consensus 84 ~g~~~gq~v~HlHiHviPr~~ 104 (149)
T 2eo4_A 84 IGRSAGQVIFHLHVHIIPTWE 104 (149)
T ss_dssp CSGGGTCCSCSCCEEEEEECS
T ss_pred cCcCCCCCcCEEEEEEECCcC
Confidence 999999999999999999753
No 12
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.91 E-value=1.5e-24 Score=152.76 Aligned_cols=85 Identities=15% Similarity=0.106 Sum_probs=76.4
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
+..+|||||.++| |+|++|.+|||+ |+|+.++.||++++ +.+|+..+++++++ .+ ++|||+++|
T Consensus 49 p~~iV~e~e~~~a---fld~~P~~pgH~LVIPkrHv~~l~dL~~ee-----~~~L~~~~~~v~~~l~~~~~~~g~ni~~n 120 (173)
T 3l7x_A 49 PSSKVYEDEDVLA---FLDISQATKGHTLVIPKEHVRNALEMTQTQ-----AANLFARIPKIARALQKATKADGLNIINN 120 (173)
T ss_dssp CCCEEEECSSEEE---EECTTCSSTTCEEEEESSCCSCGGGCCHHH-----HHHHHHTHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CceEEEECCCEEE---EEcCCCCCCcEEEEEeccccCChhhCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4689999999999 999999999999 99999999999865 57888888888776 34 589999999
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
+|+.+||+|+|+|+|||||..
T Consensus 121 ~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 121 NEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp CSGGGTCCSCSCCEEEEEECC
T ss_pred cCcccCCCcCEEEEEEEeccc
Confidence 999999999999999999864
No 13
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.91 E-value=3e-24 Score=145.09 Aligned_cols=81 Identities=21% Similarity=0.177 Sum_probs=73.8
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh-hCCCceEEEEecCc
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK-KLIRNYRVVVNNGW 79 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~-~~~~g~~i~~n~G~ 79 (103)
++.+|||||.++| |+|++|.+|||+ |+|+.++.||++++. .+|+.++++++++ + ++|||+++|+|+
T Consensus 17 ~~~iv~e~~~~~a---f~d~~p~~pgh~lViPk~H~~~l~dL~~~~~-----~~l~~~~~~v~~~~~-~~~~ni~~n~g~ 87 (135)
T 3r6f_A 17 GANIIYETDRLFA---LIDRYPLSKGHFLVIPKAHHPYLHNYKPEEL-----SGVLDTIRHLVQKFG-FERYNILQNNGN 87 (135)
T ss_dssp CCSCCEECSSEEE---EECSSCSSTTCEEEEESSCCSSGGGSCGGGG-----TTHHHHHHHHHHHHT-CCSEEEECCSSS
T ss_pred CceEEEECCCEEE---EECCCCCCCCeEEEEEhhHhCCHhHCCHHHH-----HHHHHHHHHHHHHhC-CCCeEEEEEcCC
Confidence 5789999999999 999999999999 999999999999765 7888888888876 3 368999999999
Q ss_pred cCCCCcceeeeeeEcCC
Q psy5902 80 EAVQFSGHLHLHVLGGR 96 (103)
Q Consensus 80 ~agQ~V~HlHlHvip~~ 96 (103)
||+|+|+|+|||||.
T Consensus 88 --gq~v~HlH~HiiPR~ 102 (135)
T 3r6f_A 88 --HQEVFHVHFHVIPFV 102 (135)
T ss_dssp --SCSSSSCCEEEEECC
T ss_pred --CCCccEEEEEEeccc
Confidence 999999999999985
No 14
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.90 E-value=2.5e-24 Score=146.21 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=75.5
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
++.+|||||.++| |+|++|.+|||+ |+|+.++.||++++ +.+|+..+++++++ .+ ++|||+++|
T Consensus 18 ~~~iv~e~~~~~a---~~~~~p~~pgh~LViPk~h~~~l~dL~~~~-----~~~l~~~~~~v~~~l~~~~~~~~~ni~~n 89 (145)
T 1y23_A 18 PSAKVYEDEHVLA---FLDISQVTKGHTLVIPKTHIENVYEFTDEL-----AKQYFHAVPKIARAIRDEFEPIGLNTLNN 89 (145)
T ss_dssp CCCEEEECSSEEE---EECTTCSSTTCEEEEESSCCSSGGGCCHHH-----HHTTTTHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred CCCEEEECCCEEE---EECCCCCCCCeEEEEEhhhhhhHHhCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence 4689999999999 999999999998 99999999999865 47777777777776 33 579999999
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
+|+.+||+|+|+|+|||||..
T Consensus 90 ~g~~~g~~v~HlH~HiiPr~~ 110 (145)
T 1y23_A 90 NGEKAGQSVFHYHMHIIPRYG 110 (145)
T ss_dssp ESGGGTCCSSSCCEEEEEECS
T ss_pred CCcCCCCCcCEEEEEEEcccc
Confidence 999999999999999999864
No 15
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.88 E-value=4.7e-23 Score=149.96 Aligned_cols=88 Identities=25% Similarity=0.140 Sum_probs=78.0
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHhhC-CCceEEEEecCc
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAKKL-IRNYRVVVNNGW 79 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~~~-~~g~~i~~n~G~ 79 (103)
+..+||||+.++| |+|++|.++||+ |+|+.++.+|++++. ..+..+++.+.+++++.+ ++|||+++|+|+
T Consensus 83 ~~~iV~edd~~~a---fld~~P~~pGH~LVIPkrHv~~l~dL~~ee~--~~L~~l~~~v~~~l~~~~~~~g~ni~~n~G~ 157 (218)
T 3ano_A 83 EGLVVARGKLVYA---VLNLYPYNPGHLMVVPYRRVSELEDLTDLES--AELMAFTQKAIRVIKNVSRPHGFNVGLNLGT 157 (218)
T ss_dssp HHTEEEECSSEEE---EECSSCSSTTCEEEEESSCCCCGGGSCHHHH--HHHHHHHHHHHHHHHHHCCCSEEEEEEEESG
T ss_pred CceEEEECCcEEE---EEccCCCCCcEEEEEechhhCChhhCCHHHH--HHHHHHHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 4579999999999 999999999999 999999999999887 667777777766666644 679999999999
Q ss_pred cCCCCc-ceeeeeeEcCCC
Q psy5902 80 EAVQFS-GHLHLHVLGGRP 97 (103)
Q Consensus 80 ~agQ~V-~HlHlHvip~~~ 97 (103)
.+||+| +|+|+|||||..
T Consensus 158 ~aGq~V~~HlHiHIIPR~~ 176 (218)
T 3ano_A 158 SAGGSLAEHLHVHVVPRWG 176 (218)
T ss_dssp GGTCTTTTSCCEEEEEECT
T ss_pred ccCCcccCEEEEEEEcccC
Confidence 999999 999999999864
No 16
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.87 E-value=3.4e-22 Score=155.55 Aligned_cols=89 Identities=27% Similarity=0.349 Sum_probs=78.7
Q ss_pred cCccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEE
Q psy5902 4 KVENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVV 75 (103)
Q Consensus 4 ~~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~ 75 (103)
+-+.+|||||.++| |+|++|.+|||+ |+|+.++.||++++ +.+|+..+++++++ .+ ++|||+++
T Consensus 307 p~~~iv~e~~~~~a---~~~~~p~~pgh~lviPk~h~~~~~~l~~~~-----~~~l~~~~~~v~~~l~~~~~~~~~n~~~ 378 (440)
T 1ems_A 307 PADHIFYSTPHSFV---FVNLKPVTDGHVLVSPKRVVPRLTDLTDAE-----TADLFIVAKKVQAMLEKHHNVTSTTICV 378 (440)
T ss_dssp CGGGEEEECSSEEE---EECSSCSSTTCEEEEESSCCSCGGGSCHHH-----HHHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCceEEEECCCEEE---EEcCCcCCCCeEEEEEccccCChhHCCHHH-----HHHHHHHHHHHHHHHHhhcCCCCeEEEE
Confidence 33468999999999 999999999999 99999999999865 58888888888876 34 57999999
Q ss_pred ecCccCCCCcceeeeeeEcCCCCCC
Q psy5902 76 NNGWEAVQFSGHLHLHVLGGRPLHW 100 (103)
Q Consensus 76 n~G~~agQ~V~HlHlHvip~~~~~~ 100 (103)
|+|+.+||+|+|+|+|||||....|
T Consensus 379 ~~g~~~gq~v~HlH~Hiipr~~~d~ 403 (440)
T 1ems_A 379 QDGKDAGQTVPHVHIHILPRRAGDF 403 (440)
T ss_dssp CCSGGGTCCSSSCCEEEEEECSSCC
T ss_pred ecCCCCCCCccEEEEEEeCCCCCCC
Confidence 9999999999999999999977653
No 17
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.87 E-value=4.2e-22 Score=134.59 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=69.4
Q ss_pred CccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 5 VENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 5 ~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
++.+|||||.++| |+|++|.+|||+ |+|+.++.||++++ +.+|+..+++++++ .+ ++++++.
T Consensus 18 p~~iV~e~~~~~a---f~d~~P~~pgH~LViPk~H~~~l~dL~~~e-----~~~l~~~~~~v~~~l~~~~~~~~~n~~-- 87 (138)
T 3p0t_A 18 PGRFVYEDDDVVA---FLTIEPMTQGHTLVVPREEIDNWQDVDSAA-----FNRVMGVSQLIGKAVCKAFRTERSGLI-- 87 (138)
T ss_dssp CCCEEEECSSEEE---EECSSCSSTTCEEEEESSCCCCGGGSCHHH-----HHHHHHHHHHHHHHHHHHHTCSEEEEE--
T ss_pred CcCEEEeCCCEEE---EecCCCCCCcEEEEEEhHHhCchhhCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCCcEE--
Confidence 4689999999999 999999999999 99999999999855 58888888888776 34 4677764
Q ss_pred cCccCCCCcceeeeeeEcCCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRPL 98 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~~ 98 (103)
.+||+|+|+|+|||||+..
T Consensus 88 ---~~gq~v~HlH~HiiPr~~~ 106 (138)
T 3p0t_A 88 ---IAGLEVPHLHVHVFPTRSL 106 (138)
T ss_dssp ---ECCSSCSSCCEEEEEESCG
T ss_pred ---ECCcccCEEEEEEeccccC
Confidence 3799999999999998753
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.84 E-value=1.2e-20 Score=129.66 Aligned_cols=81 Identities=19% Similarity=0.185 Sum_probs=68.8
Q ss_pred cCccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEE
Q psy5902 4 KVENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVV 75 (103)
Q Consensus 4 ~~~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~ 75 (103)
.++.+|||||.++| |+|++|.+|||+ |+|+.++.||++++. .+|+..+++++++ .+ ++|||+.
T Consensus 18 ~~~~iv~e~~~~~a---~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~-----~~l~~~~~~v~~~l~~~~~~~g~ni~- 88 (154)
T 2oik_A 18 AGGEILWQDALCRV---VHVENQDYPGFCRVILNRHVKEMSDLRPAER-----DHLMLVVFAVEEAVREVMRPDKINLA- 88 (154)
T ss_dssp CCSEEEEECSSEEE---EECCCTTCTTCEEEEESSCCSCGGGSCHHHH-----HHHHHHHHHHHHHHHHHHCCSEEEEE-
T ss_pred CCCeEEEECCcEEE---EEcCCCCCCeEEEEEecCCcCChHHCCHHHH-----HHHHHHHHHHHHHHHHHhCCCcEEhH-
Confidence 35789999999999 999999999999 999999999999764 6666666666665 34 5799996
Q ss_pred ecCccCCCCcceeeeeeEcCCC
Q psy5902 76 NNGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 76 n~G~~agQ~V~HlHlHvip~~~ 97 (103)
.+||+|+|+|+|||||..
T Consensus 89 ----~~gq~v~HlHiHiiPr~~ 106 (154)
T 2oik_A 89 ----SLGNMTPHVHWHVIPRFK 106 (154)
T ss_dssp ----ECCSSSCSCEEEEEEECT
T ss_pred ----HhCCCCCEEEEEEeCCCC
Confidence 368999999999999864
No 19
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.82 E-value=2.4e-20 Score=126.78 Aligned_cols=79 Identities=8% Similarity=0.026 Sum_probs=64.8
Q ss_pred ccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEec
Q psy5902 6 ENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVNN 77 (103)
Q Consensus 6 ~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n~ 77 (103)
..+|+|++.+++ |++.+|..|||+ |+|++++.||++++. .+++..+++++++ .+ ++|+|++
T Consensus 13 ~~~v~~~~~~~v---~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~-----~~l~~~~~~v~~~l~~~~~~~~~N~~--- 81 (137)
T 3ohe_A 13 THKLGESRLCDV---LLMNDNTWPWVILVPRVSGIREIYELPNEQQ-----QRLLFESSALSEGMMELFGGDKMNVA--- 81 (137)
T ss_dssp EEEEEECSSEEE---EEESCTTSCEEEEEESCTTCCSGGGSCHHHH-----HHHHHHHHHHHHHHHHHTTCSEEEEE---
T ss_pred cEEEEECCcEEE---EEcCCCCCCEEEEEecccccCChHHCCHHHH-----HHHHHHHHHHHHHHHHHhCCCeEEEe---
Confidence 468999999999 999999999999 799999999999765 4455555555443 34 5787775
Q ss_pred CccCCCCcceeeeeeEcCCC
Q psy5902 78 GWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 78 G~~agQ~V~HlHlHvip~~~ 97 (103)
.+||+|+|+|+|||||+.
T Consensus 82 --~aGq~V~HlH~HviPR~~ 99 (137)
T 3ohe_A 82 --ALGNMVPQLHLHHIVRYQ 99 (137)
T ss_dssp --ECCSSCCSCCEEEEEECT
T ss_pred --eccCcCCEEEEEEeCCCC
Confidence 689999999999999864
No 20
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.81 E-value=4.7e-20 Score=127.16 Aligned_cols=79 Identities=9% Similarity=0.049 Sum_probs=64.3
Q ss_pred ccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEec
Q psy5902 6 ENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVNN 77 (103)
Q Consensus 6 ~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n~ 77 (103)
..+|+|++.+++ |++.+|.+|||+ |+|++++.||++++. .+++..+++++++ .+ ++|+|++
T Consensus 13 ~~~v~~~~~~~v---~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~-----~~l~~~~~~va~al~~~~~~~~~Ni~--- 81 (149)
T 3i24_A 13 CIVLGNLPLCKV---LLIKEDIGPWLILVPRIEELKEIHHMTDEQQ-----IQFIKESSAVAQLLEDNFSPDKINIG--- 81 (149)
T ss_dssp EEEEEECSSEEE---EEECBSSTTEEEEEESCTTCSSGGGSCHHHH-----HHHHHHHHHHHHHHHHHHCCSEEEEE---
T ss_pred CEEEEECCCEEE---EEcCCCCCCEEEEEeCccccCChhHCCHHHH-----HHHHHHHHHHHHHHHHhhCCCeEEEh---
Confidence 468999999999 999999999999 779999999999765 4455555555444 33 5787775
Q ss_pred CccCCCCcceeeeeeEcCCC
Q psy5902 78 GWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 78 G~~agQ~V~HlHlHvip~~~ 97 (103)
.+||+|+|+|+|||||+.
T Consensus 82 --~aGq~V~HlH~HvIPR~~ 99 (149)
T 3i24_A 82 --ALGNLVPQLHIHHIARFT 99 (149)
T ss_dssp --ECCSSCCSCCEEEEEECT
T ss_pred --hhhCCCCEEEEEEeCCcc
Confidence 489999999999999865
No 21
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.77 E-value=8.9e-19 Score=118.70 Aligned_cols=79 Identities=11% Similarity=0.052 Sum_probs=64.0
Q ss_pred ccEEEECCCEEEeccccCCCcCCccee---e-ccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEec
Q psy5902 6 ENYVCFTDSTVALCWVHGTPPQGNVFV---A-NRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVNN 77 (103)
Q Consensus 6 ~~iv~e~d~~~a~~af~d~~P~~~gH~---k-~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n~ 77 (103)
..+|+|++.+.+ +++.+|..||++ | +|++++.||++++. .+++..+++++++ .+ ++|+|++
T Consensus 15 ~~~v~~~~~~~v---~l~~~~~~p~~lvVpkr~h~~~l~dl~~~~~-----~~l~~~~~~v~~~l~~~~~~~~~N~~--- 83 (135)
T 3nrd_A 15 GIPIGTLGLCQM---RLMNDRRWPWLILVPQRADIKEVFELTPLDQ-----AMLTFETNLVAAGLKKATGAEKINIG--- 83 (135)
T ss_dssp EEEEEECSSEEE---EEESCTTSCEEEEEECCTTCCSGGGSCHHHH-----HHHHHHHHHHHHHHHHHHTCSEEEEE---
T ss_pred CEEEEECCcEEE---EEcCCCCCCEEEEEcCccccCChHHCCHHHH-----HHHHHHHHHHHHHHHHhcCCCeEEEe---
Confidence 468999999999 999999999988 6 79999999999764 4555555555544 33 5787774
Q ss_pred CccCCCCcceeeeeeEcCCC
Q psy5902 78 GWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 78 G~~agQ~V~HlHlHvip~~~ 97 (103)
.+||+|+|+|+|||||..
T Consensus 84 --~aGq~V~HlH~HviPR~~ 101 (135)
T 3nrd_A 84 --ALGNIVRQLHVHVIARRE 101 (135)
T ss_dssp --ECCSSCCSCCEEEEEECT
T ss_pred --eccCCCCEEEEEEecCCC
Confidence 689999999999999864
No 22
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.76 E-value=2.9e-18 Score=131.71 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=69.5
Q ss_pred EEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHH-HHHHHhhC-CCceEEEEecCccC
Q psy5902 8 YVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVA-KKVAAKKL-IRNYRVVVNNGWEA 81 (103)
Q Consensus 8 iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a-~~v~~~~~-~~g~~i~~n~G~~a 81 (103)
+|||||.++| |.|++|.+|||+ |+|+.++.+|++++. ..|..+++.+ +++.+ .+ .+|||+++|+|+.+
T Consensus 227 iV~E~e~~~a---f~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~--~~La~~l~~v~~~l~~-~~~~~~yn~~~n~gp~~ 300 (351)
T 1z84_A 227 VIDESSHFVS---VAPFAATYPFEIWIIPKDHSSHFHHLDDVKA--VDLGGLLKLMLQKIAK-QLNDPPYNYMIHTSPLK 300 (351)
T ss_dssp EEEECSSEEE---EECTTCSSTTCEEEEESSCCSCGGGCCHHHH--HHHHHHHHHHHHHHHH-HTTSCCEEEEEECCCTT
T ss_pred EEecCCcEEE---EeccCCCCCeEEEEEeccccCChHHCCHHHH--HHHHHHHHHHHHHHHH-hcCCCCEEEEEeCCCcc
Confidence 8999999999 999999999999 999999999999776 4455544433 22222 33 35999999999998
Q ss_pred C----CCcceeeeeeEcCCC
Q psy5902 82 V----QFSGHLHLHVLGGRP 97 (103)
Q Consensus 82 g----Q~V~HlHlHvip~~~ 97 (103)
| |+++|+|+||+||.+
T Consensus 301 g~~~~q~v~HlHiHiiPR~~ 320 (351)
T 1z84_A 301 VTESQLPYTHWFLQIVPQLS 320 (351)
T ss_dssp CCGGGGGGCCCEEEEEECCC
T ss_pred CCCCCCccceEEEEEEccCC
Confidence 7 899999999999864
No 23
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.72 E-value=2.8e-17 Score=125.88 Aligned_cols=81 Identities=17% Similarity=0.089 Sum_probs=67.4
Q ss_pred ccEEEECCCEEEeccccCCCcCCccee----eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-C-CceEEEEe
Q psy5902 6 ENYVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-I-RNYRVVVN 76 (103)
Q Consensus 6 ~~iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~-~g~~i~~n 76 (103)
+.+|||||.++| |.|++|.+|||+ |+|+.++.||++++. .+|+..+++++++ .+ . .+||+++|
T Consensus 210 ~~iV~E~e~~~a---f~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~-----~~La~~l~~v~~~l~~~~~~~~~Yn~g~~ 281 (348)
T 1gup_A 210 SRTVVETEHWLA---VVPYWAAWPFETLLLPKAHVLRITDLTDAQR-----SDLALALKKLTSRYDNLFQCSFPYSMGWH 281 (348)
T ss_dssp TTEEEECSSEEE---ECCTTCCSTTCEEEEESSCCSSGGGCCHHHH-----HHHHHHHHHHHHHHHHHHTSCCCEEEEEE
T ss_pred ceEEEeCCcEEE---EEccCCCCceEEEEEeCcccCChHHCCHHHH-----HHHHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 489999999999 999999999999 999999999999775 4444444444443 22 3 49999999
Q ss_pred cCccC--CCCcceeeeeeEc
Q psy5902 77 NGWEA--VQFSGHLHLHVLG 94 (103)
Q Consensus 77 ~G~~a--gQ~V~HlHlHvip 94 (103)
.++.+ ||+|+|+|+||+|
T Consensus 282 ~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 282 GAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCCSSSSCCTTCCCEEEEEC
T ss_pred eCCCCCCCCcccEEEEEEec
Confidence 99875 4999999999999
No 24
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.70 E-value=9.9e-18 Score=120.93 Aligned_cols=88 Identities=15% Similarity=0.243 Sum_probs=70.6
Q ss_pred cCcc---EEEECCCEEEeccccCCCcCCccee----eccccccccCch---hhhHHHHHHHHHHHHH-H-HHHh------
Q psy5902 4 KVEN---YVCFTDSTVALCWVHGTPPQGNVFV----ANRVSKLQQTID---CERLFHILGHLMIVAK-K-VAAK------ 65 (103)
Q Consensus 4 ~~~~---iv~e~d~~~a~~af~d~~P~~~gH~----k~Hi~~l~~l~~---~e~~~~~l~~l~~~a~-~-v~~~------ 65 (103)
+|+. +|||||.++| |+|++|+++||+ |+|+.++.++.+ ++. +++.+|..+|+ + +++.
T Consensus 16 ~Pe~~p~~v~edd~~~a---f~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~--~Ll~~m~~la~~~~l~~~~~~~~~ 90 (204)
T 3sp4_A 16 SPESYKNVIYYDDDVVL---VRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHR--SLVEKLVSYVQGDLSGLIFDEARN 90 (204)
T ss_dssp CGGGCTTEEEECSSEEE---EECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCH--HHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred ChhhCCCEEEEcCCEEE---EeCCCCCCCccEEEEeccccCcccchhhhhhhhH--HHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4555 9999999999 999999999998 999999887644 334 78899998888 6 3322
Q ss_pred ---hCC--CceEEEEecCccCCCCcceeeeeeEcCC
Q psy5902 66 ---KLI--RNYRVVVNNGWEAVQFSGHLHLHVLGGR 96 (103)
Q Consensus 66 ---~~~--~g~~i~~n~G~~agQ~V~HlHlHvip~~ 96 (103)
.++ +||+..+|.|..|+|||.|||+|||...
T Consensus 91 ~~~~~~~~~~~~~~i~~GfHa~PSm~HLHLHVIS~D 126 (204)
T 3sp4_A 91 CLSQQLTNEALCNYIKVGFHAGPSMNNLHLHIMTLD 126 (204)
T ss_dssp HSCTTCCHHHHHTTEEEEEESSCSSSSCCEEEEESC
T ss_pred hhcccCCcCCeeeeEeccCCCCCcccceeEEEeccC
Confidence 132 3566677889999999999999999864
No 25
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.67 E-value=1.3e-16 Score=109.94 Aligned_cols=78 Identities=9% Similarity=0.086 Sum_probs=63.5
Q ss_pred ccEEEECCCEEEeccccCCCcCCccee----ec-cccccccCchhhhHHHHHHHHHHHHHHHHHh---hC-CCceEEEEe
Q psy5902 6 ENYVCFTDSTVALCWVHGTPPQGNVFV----AN-RVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KL-IRNYRVVVN 76 (103)
Q Consensus 6 ~~iv~e~d~~~a~~af~d~~P~~~gH~----k~-Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~-~~g~~i~~n 76 (103)
..+++|.+.+++ +++ +|.+.+|+ |+ |++++.||++++ +.+++..+++++++ .+ ++|||++
T Consensus 18 ~~~~~e~p~~~v---~l~-~~~~~~H~LVIPk~~H~~~l~dL~~e~-----~~~l~~~~~~va~~l~~~~~~~g~N~~-- 86 (149)
T 3i4s_A 18 TIDIGDLPLSKV---LVI-KDANYPWLLLVPRRPDAVEIIDLDEVQ-----QAQLMTEISRVSRALKEITKCDKLNIA-- 86 (149)
T ss_dssp EEEEEECSSEEE---EEE-SCTTSCEEEEEECCTTCCSGGGSCHHH-----HHHHHHHHHHHHHHHHHHHTCSEEEEE--
T ss_pred CEEEEEcCceEE---EEC-CCCCCCEEEEEecccccCChhHCCHHH-----HHHHHHHHHHHHHHHHHhcCCCeEEEe--
Confidence 357899999999 887 56677788 88 999999999865 47788888888776 33 5788764
Q ss_pred cCccCCCCcceeeeeeEcCCC
Q psy5902 77 NGWEAVQFSGHLHLHVLGGRP 97 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvip~~~ 97 (103)
.+||+|+|+|+|||||..
T Consensus 87 ---~aGq~V~HlH~HvIPR~~ 104 (149)
T 3i4s_A 87 ---ALGNLVPQLHVHIIARRT 104 (149)
T ss_dssp ---ECCSSCCSCCEEEEEECT
T ss_pred ---ecCCcCCEEEEEEECCcC
Confidence 689999999999999864
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=99.00 E-value=1.8e-09 Score=81.66 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=73.2
Q ss_pred CcCccEEEECCC----EEEeccccCCC----cCCccee-----eccccccccCchhhhHHHHHHHHHHHHHHHHHh--hC
Q psy5902 3 FKVENYVCFTDS----TVALCWVHGTP----PQGNVFV-----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK--KL 67 (103)
Q Consensus 3 ~~~~~iv~e~d~----~~a~~af~d~~----P~~~gH~-----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~--~~ 67 (103)
...++++|||+. +++ |.|++ |.+.-|+ ++.+.|+.||+.++. ++|.+|...+++++++ ++
T Consensus 148 ~E~e~ilyeD~d~~~gFvl---lpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~Hl--pLL~~M~~~~~~~i~~~y~~ 222 (301)
T 3bl9_A 148 AEADRIVFENPDPSDGFVL---IPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHL--PLLRNILHQGQEAILQRYRM 222 (301)
T ss_dssp SSGGGCCEEECCTTTCEEE---EECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGH--HHHHHHHHHHHHHHHHHHCC
T ss_pred CccccEEEecCCCCcCEEE---eccCccCCCcccccEEEEEecccCCCChHHCCHhHH--HHHHHHHHHHHHHHHHhcCC
Confidence 356899999988 999 99988 7788888 455999999999998 9999999999999987 45
Q ss_pred -CCceEEEEecCccCCCCcceeeeeeEcCC
Q psy5902 68 -IRNYRVVVNNGWEAVQFSGHLHLHVLGGR 96 (103)
Q Consensus 68 -~~g~~i~~n~G~~agQ~V~HlHlHvip~~ 96 (103)
.+.++++++-.| |+.|+|+|++...
T Consensus 223 ~~~~~rlgfHy~P----S~yHLHlHvis~~ 248 (301)
T 3bl9_A 223 KGDHLRVYLHYLP----SYYHLHVHFTALG 248 (301)
T ss_dssp CGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred ChHHeEEEecCCC----CcceEEEEEEecC
Confidence 357999888766 8999999999754
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=98.94 E-value=3.3e-09 Score=81.48 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=71.6
Q ss_pred cCccEEEECCC----EEEeccccCCC----cCCccee-----eccccccccCchhhhHHHHHHHHHHHHHHHHHh--hC-
Q psy5902 4 KVENYVCFTDS----TVALCWVHGTP----PQGNVFV-----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK--KL- 67 (103)
Q Consensus 4 ~~~~iv~e~d~----~~a~~af~d~~----P~~~gH~-----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~--~~- 67 (103)
..++++|||+. +++ |.|++ |.+.-|+ ++.+.|+.||+.++. ++|.+|...+++++.. ++
T Consensus 196 E~e~vlyeD~d~~~gFvl---lpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~Hl--pLL~~M~~~~~~ii~~~yg~~ 270 (350)
T 1vlr_A 196 EADRIVFENPDPSDGFVL---IPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHL--PLLRNILREGQEAILKRYQVT 270 (350)
T ss_dssp --CCCSEEECCTTTCEEE---EECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGH--HHHHHHHHHHHHHHHHHHCCC
T ss_pred ccccEEEecCCCCCCeEE---eccCccCCCccccceEEEEecccCCCChHHCCHhHH--HHHHHHHHHHHHHHHHhcCCC
Confidence 56789999988 999 99988 7888888 455999999999998 9999999999999987 45
Q ss_pred CCceEEEEecCccCCCCcceeeeeeEcCC
Q psy5902 68 IRNYRVVVNNGWEAVQFSGHLHLHVLGGR 96 (103)
Q Consensus 68 ~~g~~i~~n~G~~agQ~V~HlHlHvip~~ 96 (103)
.+.++++++-.| |+.|+|+||+...
T Consensus 271 ~~~lRlgfHy~P----S~yHLHlHvis~~ 295 (350)
T 1vlr_A 271 GDRLRVYLHYLP----SYYHLHVHFTALG 295 (350)
T ss_dssp GGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred hHHeEEEecCCC----CcceEEEEEEecc
Confidence 357999888766 8999999999754
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=97.62 E-value=0.00026 Score=54.06 Aligned_cols=75 Identities=19% Similarity=0.143 Sum_probs=57.8
Q ss_pred CCCEEEeccccCCCcCCc------------c-----------ee----eccccccccCchhhhHHHHHHHHHHHHHHHHH
Q psy5902 12 TDSTVALCWVHGTPPQGN------------V-----------FV----ANRVSKLQQTIDCERLFHILGHLMIVAKKVAA 64 (103)
Q Consensus 12 ~d~~~a~~af~d~~P~~~------------g-----------H~----k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~ 64 (103)
+-.+++ |.+.+|..+ | ++ .+|..++.+|+.++ +..++.+.++-.+
T Consensus 86 ~~~~~v---~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls~~e-----~~~vi~~~~~~~~ 157 (351)
T 1z84_A 86 NWKLRV---IENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDIDPVG-----IGDILIAYKKRIN 157 (351)
T ss_dssp SCSEEE---EECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSCHHH-----HHHHHHHHHHHHH
T ss_pred CceEEE---EcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCCHHH-----HHHHHHHHHHHHH
Confidence 456777 999999983 4 33 89999999999965 4666666555444
Q ss_pred h--hC--CCceEEEEecCccCCCCcceeeeeeEc
Q psy5902 65 K--KL--IRNYRVVVNNGWEAVQFSGHLHLHVLG 94 (103)
Q Consensus 65 ~--~~--~~g~~i~~n~G~~agQ~V~HlHlHvip 94 (103)
. .. ...+.+..|-|+.+|-|++|.|.+|+.
T Consensus 158 ~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a 191 (351)
T 1z84_A 158 QIAQHDSINYIQVFKNQGASAGASMSHSHSQMMA 191 (351)
T ss_dssp HHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEE
T ss_pred HHhcccCCCEEEEEEEcCcccCCCCcCccceeEe
Confidence 3 21 258899999999999999999999996
No 29
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=87.24 E-value=1.4 Score=33.08 Aligned_cols=56 Identities=11% Similarity=0.007 Sum_probs=39.9
Q ss_pred eccccccccCchhhhHHHHHHHHHHHHHHHHHh---hCCCceEEEEecCccCCCCcceeeeeeEc
Q psy5902 33 ANRVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KLIRNYRVVVNNGWEAVQFSGHLHLHVLG 94 (103)
Q Consensus 33 k~Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~~~g~~i~~n~G~~agQ~V~HlHlHvip 94 (103)
.+|-.++.+|+.++. ..++.+.++-.++ .+ .=.-+.-|-|+.+|-|.+|-|.-|+.
T Consensus 113 p~H~~~l~~l~~~~~-----~~vi~~~~~r~~~l~~~~-~yV~iF~N~G~~~G~Sl~HpH~Qi~a 171 (348)
T 1gup_A 113 PDHSKTLPELSVAAL-----TEIVKTWQEQTAELGKTY-PWVQVFENKGAAMGCSNPHPGGQIWA 171 (348)
T ss_dssp SCTTCCGGGSCHHHH-----HHHHHHHHHHHHHHHHHC-SEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred CcccCChhhCCHHHH-----HHHHHHHHHHHHHHhhcC-CEEEEecccCCcCCcCCCCCceeEEe
Confidence 699999999998653 4444444333322 22 12446789999999999999999885
No 30
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=84.43 E-value=1 Score=29.17 Aligned_cols=25 Identities=12% Similarity=0.231 Sum_probs=20.8
Q ss_pred CCceEEEEecCccCCCCcceeeeeeE
Q psy5902 68 IRNYRVVVNNGWEAVQFSGHLHLHVL 93 (103)
Q Consensus 68 ~~g~~i~~n~G~~agQ~V~HlHlHvi 93 (103)
-|..++-+|.| ..|-++||.|+|+.
T Consensus 76 vDHVdi~~~~g-HpGve~PHyhI~l~ 100 (116)
T 3vg8_G 76 IDHVNMIPSGP-HPGVSEPHYHIELV 100 (116)
T ss_dssp CCEEEEEECCC-CTTCCSCEEEEEEE
T ss_pred cceEEEecCCC-CCCcccCceEEEEE
Confidence 36889999854 56999999999986
No 31
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=80.91 E-value=2.7 Score=30.33 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=49.7
Q ss_pred EEEECCCEEEeccccCCCcCCccee----ec---cccccccCchhhhHHHHHHHHHHHHHHHHHh---hCC-CceEEEEe
Q psy5902 8 YVCFTDSTVALCWVHGTPPQGNVFV----AN---RVSKLQQTIDCERLFHILGHLMIVAKKVAAK---KLI-RNYRVVVN 76 (103)
Q Consensus 8 iv~e~d~~~a~~af~d~~P~~~gH~----k~---Hi~~l~~l~~~e~~~~~l~~l~~~a~~v~~~---~~~-~g~~i~~n 76 (103)
.|......++ |.| +..+-|+ .. =|++-.-+++... +.+..-...-..++++ .++ +.+.+.+|
T Consensus 33 ~Vd~~~gyvv---lKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~p--nYf~~AW~aR~~v~~~~g~pipd~~lsLaIN 105 (227)
T 2pof_A 33 EVKPNAGYVV---LKD--LNGPLQYLLMPTYRINGTESPLLTDPSTP--NFFWLAWQARDFMSKKYGQPVPDRAVSLAIN 105 (227)
T ss_dssp EEETTTTEEE---EEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSC--CHHHHHHHTTHHHHHHHTSCCCGGGEEEEEB
T ss_pred eEccCCCEEE---EeC--CCCCceEEEeccccccCccChhhcCCCCC--cHHHHHHHHhHHHHHhhCCCCCccceEEEec
Confidence 3455677777 888 5577777 33 3444444555554 5666666555555555 344 46888887
Q ss_pred cCccCCCCcceeeeeeE
Q psy5902 77 NGWEAVQFSGHLHLHVL 93 (103)
Q Consensus 77 ~G~~agQ~V~HlHlHvi 93 (103)
.- .|.|-.+||+||-
T Consensus 106 S~--~gRSQnQLHIHIs 120 (227)
T 2pof_A 106 SR--TGRTQNHFHIHIS 120 (227)
T ss_dssp CG--GGCSCCSCCEEEE
T ss_pred CC--CCccccceeeehh
Confidence 53 5899999999975
No 32
>1omh_A TRWC protein; protein-DNA complex, bacterial conjugation, relaxase, DNA replication, transferase/DNA complex; HET: DNA; 1.95A {Escherichia coli} SCOP: d.89.1.5 PDB: 1osb_A* 1qx0_A* 1s6m_A* 1zm5_A* 2cdm_A
Probab=22.67 E-value=31 Score=25.37 Aligned_cols=8 Identities=38% Similarity=0.675 Sum_probs=7.0
Q ss_pred ceeeeeeE
Q psy5902 86 GHLHLHVL 93 (103)
Q Consensus 86 ~HlHlHvi 93 (103)
||+|.|++
T Consensus 158 P~lHtH~v 165 (293)
T 1omh_A 158 PQLHTHAV 165 (293)
T ss_dssp EEEEEEEE
T ss_pred CCceeEEE
Confidence 89999965
Done!