Query psy5911
Match_columns 1242
No_of_seqs 1009 out of 5818
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 21:36:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5911.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5911hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0100|consensus 100.0 4E-126 9E-131 992.3 56.4 591 642-1242 35-640 (663)
2 KOG0100|consensus 100.0 1E-120 3E-125 951.1 54.9 575 2-591 35-618 (663)
3 PTZ00186 heat shock 70 kDa pre 100.0 2.8E-97 6E-102 901.2 71.7 591 644-1241 28-621 (657)
4 PRK13411 molecular chaperone D 100.0 1.1E-96 2E-101 906.1 72.2 592 644-1241 3-597 (653)
5 PTZ00400 DnaK-type molecular c 100.0 9E-97 2E-101 906.6 71.1 593 644-1241 42-634 (663)
6 PRK13410 molecular chaperone D 100.0 2.2E-96 5E-101 898.6 71.5 591 643-1240 2-598 (668)
7 KOG0102|consensus 100.0 1.6E-98 3E-103 817.9 45.4 573 3-588 27-599 (640)
8 KOG0102|consensus 100.0 1.8E-98 4E-103 817.4 44.8 591 645-1240 29-622 (640)
9 PTZ00186 heat shock 70 kDa pre 100.0 6.4E-95 1.4E-99 880.6 73.1 543 3-552 27-570 (657)
10 PLN03184 chloroplast Hsp70; Pr 100.0 8.4E-95 1.8E-99 889.0 71.7 592 643-1241 39-632 (673)
11 PRK00290 dnaK molecular chaper 100.0 1.5E-94 3.3E-99 890.7 73.8 592 643-1241 2-593 (627)
12 KOG0101|consensus 100.0 2.2E-96 5E-101 842.8 48.7 591 643-1242 7-611 (620)
13 TIGR02350 prok_dnaK chaperone 100.0 2.2E-93 4.8E-98 879.0 72.4 590 645-1241 2-591 (595)
14 CHL00094 dnaK heat shock prote 100.0 3E-93 6.5E-98 875.3 71.5 591 644-1241 3-595 (621)
15 PRK13410 molecular chaperone D 100.0 1.5E-92 3.3E-97 864.8 71.1 536 2-544 1-538 (668)
16 PTZ00009 heat shock 70 kDa pro 100.0 1.6E-92 3.4E-97 870.8 70.2 590 644-1242 5-611 (653)
17 TIGR01991 HscA Fe-S protein as 100.0 5.4E-92 1.2E-96 857.7 72.2 579 645-1241 1-581 (599)
18 PRK13411 molecular chaperone D 100.0 9.2E-92 2E-96 862.5 73.1 537 2-544 1-538 (653)
19 PTZ00400 DnaK-type molecular c 100.0 1.8E-91 4E-96 859.6 70.0 537 3-544 41-577 (663)
20 PRK05183 hscA chaperone protei 100.0 6.7E-91 1.4E-95 849.3 68.9 575 645-1241 21-597 (616)
21 PLN03184 chloroplast Hsp70; Pr 100.0 4.5E-90 9.8E-95 847.1 72.9 537 1-544 37-575 (673)
22 PRK00290 dnaK molecular chaper 100.0 2.6E-89 5.6E-94 844.1 72.7 536 2-544 1-536 (627)
23 KOG0101|consensus 100.0 3.6E-90 7.8E-95 791.6 49.6 573 2-591 6-589 (620)
24 CHL00094 dnaK heat shock prote 100.0 5E-88 1.1E-92 829.1 70.5 536 2-544 1-538 (621)
25 TIGR02350 prok_dnaK chaperone 100.0 6.2E-88 1.3E-92 830.7 71.3 534 4-544 1-534 (595)
26 TIGR01991 HscA Fe-S protein as 100.0 1.4E-87 3E-92 818.9 72.8 522 5-544 1-524 (599)
27 PRK01433 hscA chaperone protei 100.0 4.5E-88 9.9E-93 814.9 66.8 550 645-1240 21-574 (595)
28 PTZ00009 heat shock 70 kDa pro 100.0 6.3E-87 1.4E-91 821.2 70.6 534 2-544 3-548 (653)
29 PRK05183 hscA chaperone protei 100.0 5.5E-87 1.2E-91 814.8 69.4 519 4-544 20-540 (616)
30 COG0443 DnaK Molecular chapero 100.0 3.6E-86 7.7E-91 792.8 57.9 568 644-1241 6-574 (579)
31 PRK01433 hscA chaperone protei 100.0 4E-85 8.7E-90 789.3 65.0 505 2-553 18-526 (595)
32 COG0443 DnaK Molecular chapero 100.0 2.1E-84 4.6E-89 777.5 58.4 514 3-544 5-519 (579)
33 PF00012 HSP70: Hsp70 protein; 100.0 2.7E-82 5.8E-87 793.0 65.9 590 645-1242 1-599 (602)
34 PF00012 HSP70: Hsp70 protein; 100.0 1.7E-78 3.6E-83 758.7 68.8 532 5-544 1-540 (602)
35 KOG0103|consensus 100.0 4.9E-78 1.1E-82 679.3 50.5 579 645-1236 3-639 (727)
36 KOG0103|consensus 100.0 3.6E-71 7.9E-76 623.7 49.9 529 2-544 1-582 (727)
37 KOG0104|consensus 100.0 5.3E-64 1.2E-68 564.9 50.1 585 645-1242 24-734 (902)
38 KOG0104|consensus 100.0 3.4E-60 7.3E-65 534.3 48.5 476 3-491 22-531 (902)
39 PRK11678 putative chaperone; P 100.0 3.1E-53 6.6E-58 494.3 39.5 342 5-383 2-448 (450)
40 PRK11678 putative chaperone; P 100.0 4.4E-50 9.5E-55 467.8 37.8 342 645-1023 2-448 (450)
41 PRK13928 rod shape-determining 100.0 4.7E-37 1E-41 352.7 33.2 313 4-384 4-325 (336)
42 PRK13929 rod-share determining 100.0 2E-36 4.4E-41 345.7 33.9 309 4-380 5-324 (335)
43 PRK13927 rod shape-determining 100.0 2.9E-34 6.4E-39 330.6 34.2 312 2-382 4-324 (334)
44 PRK13928 rod shape-determining 100.0 2.3E-34 5.1E-39 330.4 32.7 311 646-1024 6-325 (336)
45 TIGR00904 mreB cell shape dete 100.0 4.4E-34 9.4E-39 328.1 34.4 312 3-382 2-327 (333)
46 PRK13929 rod-share determining 100.0 4.3E-34 9.3E-39 326.5 34.0 309 644-1020 5-324 (335)
47 PRK13930 rod shape-determining 100.0 4.2E-33 9.1E-38 321.7 33.2 314 2-383 7-329 (335)
48 PRK13927 rod shape-determining 100.0 1.4E-31 3E-36 308.4 33.1 309 645-1022 7-324 (334)
49 TIGR00904 mreB cell shape dete 100.0 1.9E-31 4.1E-36 306.3 33.4 309 646-1022 5-327 (333)
50 PRK13930 rod shape-determining 100.0 2.4E-30 5.2E-35 298.8 32.2 311 645-1023 10-329 (335)
51 PF06723 MreB_Mbl: MreB/Mbl pr 100.0 9.4E-31 2E-35 289.4 22.6 310 4-381 2-320 (326)
52 COG1077 MreB Actin-like ATPase 100.0 1.1E-27 2.3E-32 251.3 28.4 316 3-384 6-333 (342)
53 TIGR02529 EutJ ethanolamine ut 100.0 2E-28 4.3E-33 264.1 23.0 205 109-378 34-238 (239)
54 PF06723 MreB_Mbl: MreB/Mbl pr 100.0 2.8E-28 6.1E-33 269.7 22.0 311 645-1021 3-320 (326)
55 TIGR02529 EutJ ethanolamine ut 99.9 9.6E-27 2.1E-31 251.0 20.7 205 749-1018 34-238 (239)
56 PRK14148 heat shock protein Gr 99.9 5.3E-27 1.1E-31 235.4 14.5 142 533-684 49-193 (195)
57 PRK15080 ethanolamine utilizat 99.9 1.8E-25 4E-30 245.6 27.7 202 114-380 66-267 (267)
58 PRK14147 heat shock protein Gr 99.9 5.6E-27 1.2E-31 232.7 13.9 143 532-684 26-169 (172)
59 PRK14153 heat shock protein Gr 99.9 1.2E-26 2.6E-31 232.2 15.8 166 506-685 19-187 (194)
60 COG1077 MreB Actin-like ATPase 99.9 4.6E-25 1E-29 231.6 27.9 314 645-1024 8-333 (342)
61 PRK14145 heat shock protein Gr 99.9 1.6E-26 3.4E-31 231.2 14.8 117 543-663 63-179 (196)
62 PRK14161 heat shock protein Gr 99.9 3.9E-26 8.4E-31 227.1 15.8 141 534-684 29-175 (178)
63 PRK14139 heat shock protein Gr 99.9 2.2E-26 4.7E-31 229.0 13.7 141 533-684 41-182 (185)
64 PRK14159 heat shock protein Gr 99.9 2.8E-26 6E-31 226.8 14.4 116 544-663 42-159 (176)
65 PRK14151 heat shock protein Gr 99.9 2.8E-26 6E-31 228.2 14.0 127 533-663 29-158 (176)
66 PRK14162 heat shock protein Gr 99.9 2.5E-26 5.5E-31 230.4 13.4 118 544-663 58-177 (194)
67 PRK14155 heat shock protein Gr 99.9 3.3E-26 7.1E-31 232.7 14.3 144 533-686 22-172 (208)
68 PRK14141 heat shock protein Gr 99.9 2.9E-26 6.3E-31 232.3 13.6 143 533-685 40-191 (209)
69 PRK10325 heat shock protein Gr 99.9 4.3E-26 9.3E-31 232.1 14.3 132 544-684 58-193 (197)
70 PRK14158 heat shock protein Gr 99.9 4.2E-26 9.1E-31 228.8 13.3 117 544-663 59-177 (194)
71 PRK14163 heat shock protein Gr 99.9 7E-26 1.5E-30 228.8 14.8 138 533-685 49-187 (214)
72 PRK14140 heat shock protein Gr 99.9 5E-26 1.1E-30 227.6 13.6 117 544-663 56-174 (191)
73 PRK14150 heat shock protein Gr 99.9 7.2E-26 1.6E-30 229.7 14.2 118 543-663 56-176 (193)
74 COG0576 GrpE Molecular chapero 99.9 7.8E-26 1.7E-30 230.3 14.4 143 532-684 44-190 (193)
75 PRK14144 heat shock protein Gr 99.9 9.3E-26 2E-30 225.8 14.3 131 544-683 64-196 (199)
76 PRK14146 heat shock protein Gr 99.9 1.2E-25 2.5E-30 230.4 15.3 147 533-685 63-212 (215)
77 PRK14160 heat shock protein Gr 99.9 1.3E-25 2.7E-30 227.5 15.4 115 544-663 80-194 (211)
78 PRK14154 heat shock protein Gr 99.9 1E-25 2.2E-30 227.2 14.0 128 532-663 60-191 (208)
79 PRK14149 heat shock protein Gr 99.9 1.5E-25 3.3E-30 223.2 13.7 141 533-684 45-188 (191)
80 PRK14143 heat shock protein Gr 99.9 4.7E-25 1E-29 229.2 14.1 133 544-685 86-222 (238)
81 PRK14157 heat shock protein Gr 99.9 1.1E-24 2.5E-29 221.1 14.4 141 529-684 82-223 (227)
82 PRK14156 heat shock protein Gr 99.9 4.1E-24 8.8E-29 211.2 15.2 126 532-663 35-160 (177)
83 PRK15080 ethanolamine utilizat 99.9 3.1E-23 6.8E-28 228.0 23.3 202 754-1020 66-267 (267)
84 PRK14142 heat shock protein Gr 99.9 5.7E-24 1.2E-28 214.4 13.3 130 544-685 52-182 (223)
85 PRK14164 heat shock protein Gr 99.9 3.5E-23 7.6E-28 210.9 12.6 135 533-684 79-215 (218)
86 TIGR01174 ftsA cell division p 99.9 1.6E-20 3.5E-25 219.0 27.2 194 150-379 158-371 (371)
87 KOG3003|consensus 99.9 1.2E-21 2.5E-26 195.4 13.8 135 542-685 87-231 (236)
88 PRK09472 ftsA cell division pr 99.8 9.6E-20 2.1E-24 214.4 25.3 194 153-381 169-387 (420)
89 cd00446 GrpE GrpE is the adeni 99.8 1.1E-20 2.3E-25 184.7 10.8 117 544-663 4-122 (137)
90 TIGR01174 ftsA cell division p 99.8 6.1E-18 1.3E-22 197.4 26.4 195 789-1019 157-371 (371)
91 PRK09472 ftsA cell division pr 99.7 7.2E-17 1.6E-21 190.1 22.7 194 793-1021 169-387 (420)
92 COG0849 ftsA Cell division ATP 99.7 2.2E-16 4.7E-21 179.4 24.4 325 4-383 7-381 (418)
93 PF01025 GrpE: GrpE; InterPro 99.7 5.1E-18 1.1E-22 173.3 9.2 116 545-663 31-148 (165)
94 cd00012 ACTIN Actin; An ubiqui 99.7 1.1E-15 2.3E-20 179.2 19.8 309 5-382 1-347 (371)
95 smart00268 ACTIN Actin. ACTIN 99.6 8.4E-15 1.8E-19 171.9 19.0 300 4-382 2-347 (373)
96 COG4820 EutJ Ethanolamine util 99.6 3.3E-15 7.3E-20 144.6 7.7 196 119-379 76-271 (277)
97 COG0849 ftsA Cell division ATP 99.6 5.1E-13 1.1E-17 152.1 25.6 206 779-1023 158-381 (418)
98 cd00012 ACTIN Actin; An ubiqui 99.5 3.3E-13 7.2E-18 158.2 19.9 245 754-1022 74-347 (371)
99 smart00268 ACTIN Actin. ACTIN 99.5 1.6E-12 3.5E-17 152.6 18.9 299 645-1022 3-347 (373)
100 PTZ00280 Actin-related protein 99.5 6E-12 1.3E-16 148.9 23.8 292 4-359 5-337 (414)
101 PRK13917 plasmid segregation p 99.4 2.9E-11 6.4E-16 138.2 25.0 209 135-385 109-339 (344)
102 PF00022 Actin: Actin; InterP 99.4 7.6E-12 1.6E-16 148.4 18.5 311 3-383 4-368 (393)
103 COG4820 EutJ Ethanolamine util 99.4 2.5E-13 5.4E-18 131.8 4.1 197 758-1019 75-271 (277)
104 PTZ00452 actin; Provisional 99.4 2E-11 4.4E-16 141.7 20.6 306 2-382 4-349 (375)
105 PTZ00281 actin; Provisional 99.3 2.4E-11 5.2E-16 141.6 18.4 304 4-382 7-350 (376)
106 PTZ00004 actin-2; Provisional 99.3 7.6E-11 1.6E-15 137.7 19.9 298 4-382 7-352 (378)
107 PTZ00466 actin-like protein; P 99.3 1.6E-10 3.5E-15 134.3 20.7 302 5-382 14-354 (380)
108 PTZ00280 Actin-related protein 99.3 5E-10 1.1E-14 132.7 23.3 229 753-999 80-337 (414)
109 PRK13917 plasmid segregation p 99.2 8.9E-10 1.9E-14 126.1 21.2 208 776-1025 110-339 (344)
110 PF00022 Actin: Actin; InterP 99.2 7.7E-10 1.7E-14 131.2 18.8 309 645-1023 6-368 (393)
111 TIGR03739 PRTRC_D PRTRC system 99.2 1.2E-09 2.5E-14 124.6 19.1 205 135-380 101-318 (320)
112 PTZ00452 actin; Provisional 99.1 1.3E-09 2.9E-14 126.5 19.7 236 754-1022 79-349 (375)
113 TIGR01175 pilM type IV pilus a 99.1 2E-09 4.3E-14 125.3 20.7 179 149-380 142-347 (348)
114 PTZ00004 actin-2; Provisional 99.1 6.2E-09 1.3E-13 121.7 20.0 234 754-1022 80-352 (378)
115 PTZ00281 actin; Provisional 99.0 1.3E-09 2.9E-14 127.1 13.6 238 754-1022 80-350 (376)
116 PTZ00466 actin-like protein; P 99.0 1.5E-08 3.3E-13 117.9 20.8 236 753-1022 85-354 (380)
117 PF11104 PilM_2: Type IV pilus 99.0 1.1E-08 2.3E-13 118.1 17.3 202 122-380 92-339 (340)
118 TIGR03739 PRTRC_D PRTRC system 99.0 2.3E-08 5E-13 114.1 18.7 205 775-1020 101-318 (320)
119 KOG0679|consensus 98.9 1.4E-07 3E-12 102.0 19.0 182 4-244 12-202 (426)
120 PF06406 StbA: StbA protein; 98.8 2.7E-08 5.8E-13 113.1 13.7 172 165-377 141-316 (318)
121 TIGR01175 pilM type IV pilus a 98.7 1.4E-07 3E-12 109.9 16.3 180 788-1020 141-347 (348)
122 COG5277 Actin and related prot 98.7 7.2E-07 1.6E-11 104.1 18.3 193 6-245 9-205 (444)
123 TIGR00241 CoA_E_activ CoA-subs 98.6 2.8E-06 6.1E-11 93.2 21.6 171 168-379 73-248 (248)
124 PF11104 PilM_2: Type IV pilus 98.6 3.2E-07 6.9E-12 105.9 13.5 178 790-1020 136-339 (340)
125 COG4972 PilM Tfp pilus assembl 98.6 7.1E-06 1.5E-10 88.0 21.2 157 152-361 151-314 (354)
126 KOG0679|consensus 98.6 2.8E-06 6.1E-11 92.2 18.3 117 754-884 85-202 (426)
127 PF07520 SrfB: Virulence facto 98.5 1.7E-05 3.7E-10 97.9 23.7 336 49-390 330-842 (1002)
128 PF07520 SrfB: Virulence facto 98.4 8.6E-06 1.9E-10 100.4 20.3 337 690-1032 331-844 (1002)
129 PRK10719 eutA reactivating fac 98.3 2.6E-06 5.7E-11 97.2 9.3 85 138-234 90-182 (475)
130 PF06406 StbA: StbA protein; 98.3 3.1E-06 6.6E-11 96.4 9.8 172 805-1017 141-316 (318)
131 COG5277 Actin and related prot 98.2 3.7E-05 8E-10 90.0 18.8 120 755-885 84-205 (444)
132 TIGR03286 methan_mark_15 putat 98.2 4.9E-05 1.1E-09 86.0 17.1 45 337-381 358-402 (404)
133 TIGR03192 benz_CoA_bzdQ benzoy 98.2 0.00026 5.7E-09 77.1 21.7 46 337-382 242-288 (293)
134 COG1924 Activator of 2-hydroxy 98.1 0.00025 5.4E-09 78.0 19.7 72 307-382 318-390 (396)
135 KOG0676|consensus 98.0 8E-05 1.7E-09 83.8 14.4 240 110-381 74-345 (372)
136 TIGR00241 CoA_E_activ CoA-subs 98.0 0.00013 2.9E-09 80.0 15.9 170 808-1019 73-248 (248)
137 PF08841 DDR: Diol dehydratase 97.8 0.0003 6.5E-09 73.7 13.1 193 159-379 105-328 (332)
138 PRK13317 pantothenate kinase; 97.8 0.0023 4.9E-08 70.7 20.9 48 334-381 222-273 (277)
139 COG4972 PilM Tfp pilus assembl 97.7 0.001 2.2E-08 71.9 15.6 157 792-1001 151-314 (354)
140 TIGR02261 benz_CoA_red_D benzo 97.6 0.0055 1.2E-07 66.1 20.5 44 337-380 214-262 (262)
141 PF08841 DDR: Diol dehydratase 97.6 0.0028 6E-08 66.8 17.0 192 800-1019 106-328 (332)
142 PRK10719 eutA reactivating fac 97.5 0.00037 8E-09 80.0 10.4 86 777-874 89-182 (475)
143 TIGR03192 benz_CoA_bzdQ benzoy 97.4 0.0053 1.2E-07 67.2 16.0 47 976-1022 241-288 (293)
144 PRK15027 xylulokinase; Provisi 97.3 0.0053 1.1E-07 74.8 17.2 215 793-1028 211-440 (484)
145 COG4457 SrfB Uncharacterized p 97.2 0.02 4.3E-07 66.8 19.4 91 936-1031 742-855 (1014)
146 COG1070 XylB Sugar (pentulose 97.2 0.033 7.3E-07 68.0 23.1 81 300-382 369-449 (502)
147 COG4457 SrfB Uncharacterized p 97.2 0.019 4.1E-07 67.0 19.0 89 297-390 743-854 (1014)
148 COG1924 Activator of 2-hydroxy 97.2 0.0061 1.3E-07 67.4 14.6 73 946-1022 317-390 (396)
149 KOG0797|consensus 97.0 0.0068 1.5E-07 68.7 12.7 123 748-883 194-322 (618)
150 TIGR02628 fuculo_kin_coli L-fu 97.0 0.011 2.5E-07 71.5 15.6 87 937-1026 358-444 (465)
151 KOG0676|consensus 97.0 0.004 8.7E-08 70.4 10.6 232 758-1021 82-345 (372)
152 TIGR03286 methan_mark_15 putat 97.0 0.005 1.1E-07 70.1 11.3 46 976-1021 357-402 (404)
153 KOG0677|consensus 96.9 0.011 2.4E-07 61.0 12.1 223 136-385 101-364 (389)
154 PRK00047 glpK glycerol kinase; 96.8 0.035 7.5E-07 68.0 17.7 203 802-1026 236-454 (498)
155 KOG0797|consensus 96.8 0.011 2.3E-07 67.3 11.7 122 109-243 195-322 (618)
156 PRK10331 L-fuculokinase; Provi 96.7 0.032 6.9E-07 67.8 16.7 210 795-1026 219-440 (470)
157 TIGR02259 benz_CoA_red_A benzo 96.6 0.025 5.3E-07 63.7 13.1 68 950-1020 360-432 (432)
158 TIGR02259 benz_CoA_red_A benzo 96.6 0.014 3E-07 65.6 11.1 45 336-380 383-432 (432)
159 TIGR01312 XylB D-xylulose kina 96.5 0.055 1.2E-06 66.2 16.9 52 974-1026 390-441 (481)
160 PRK15027 xylulokinase; Provisi 96.5 0.05 1.1E-06 66.3 16.3 83 300-386 355-438 (484)
161 PF02782 FGGY_C: FGGY family o 96.4 0.0048 1E-07 65.4 6.0 48 974-1022 149-196 (198)
162 TIGR02261 benz_CoA_red_D benzo 96.4 0.016 3.6E-07 62.5 9.8 44 977-1020 214-262 (262)
163 KOG0677|consensus 96.4 0.014 3.1E-07 60.3 8.5 223 776-1025 101-364 (389)
164 TIGR01314 gntK_FGGY gluconate 96.3 0.083 1.8E-06 64.8 16.7 83 940-1026 369-452 (505)
165 COG1069 AraB Ribulose kinase [ 96.2 0.026 5.7E-07 65.6 10.7 224 793-1027 232-483 (544)
166 PF02782 FGGY_C: FGGY family o 96.2 0.0078 1.7E-07 63.8 6.2 74 308-382 122-196 (198)
167 PTZ00294 glycerol kinase-like 96.1 0.25 5.4E-06 60.6 19.5 205 801-1027 236-458 (504)
168 KOG0680|consensus 96.0 0.27 5.9E-06 53.1 15.9 99 136-243 93-199 (400)
169 PRK00047 glpK glycerol kinase; 95.8 0.25 5.4E-06 60.5 17.6 77 309-386 377-454 (498)
170 TIGR01315 5C_CHO_kinase FGGY-f 95.7 0.018 3.9E-07 71.0 7.1 88 938-1026 407-494 (541)
171 PF06277 EutA: Ethanolamine ut 95.7 0.086 1.9E-06 61.1 11.8 85 139-232 88-177 (473)
172 COG1070 XylB Sugar (pentulose 95.7 0.19 4E-06 61.5 15.6 81 939-1021 368-448 (502)
173 PF01869 BcrAD_BadFG: BadF/Bad 95.4 5.1 0.00011 44.6 25.1 70 308-380 197-271 (271)
174 PLN02669 xylulokinase 95.4 0.037 8E-07 68.2 8.3 77 941-1022 416-492 (556)
175 TIGR01234 L-ribulokinase L-rib 95.2 0.057 1.2E-06 66.7 9.1 84 939-1026 403-487 (536)
176 TIGR01315 5C_CHO_kinase FGGY-f 95.2 0.047 1E-06 67.4 8.2 85 300-385 409-493 (541)
177 PLN02295 glycerol kinase 95.0 0.072 1.6E-06 65.4 9.2 87 939-1026 374-463 (512)
178 TIGR02627 rhamnulo_kin rhamnul 95.0 0.071 1.5E-06 64.5 8.9 86 938-1028 353-439 (454)
179 PLN02669 xylulokinase 94.9 0.067 1.5E-06 65.9 8.4 76 302-382 417-492 (556)
180 TIGR01311 glycerol_kin glycero 94.9 0.05 1.1E-06 66.5 7.2 84 939-1026 366-450 (493)
181 PRK04123 ribulokinase; Provisi 94.8 0.054 1.2E-06 67.2 7.3 82 940-1025 407-489 (548)
182 COG1069 AraB Ribulose kinase [ 94.8 0.27 5.8E-06 57.6 12.1 81 302-386 399-482 (544)
183 PRK10939 autoinducer-2 (AI-2) 94.6 0.098 2.1E-06 64.4 9.0 81 942-1026 379-460 (520)
184 PRK10640 rhaB rhamnulokinase; 94.6 0.11 2.4E-06 62.8 9.2 80 942-1026 345-425 (471)
185 TIGR02628 fuculo_kin_coli L-fu 94.2 0.097 2.1E-06 63.5 7.5 80 300-385 361-443 (465)
186 PTZ00294 glycerol kinase-like 94.2 0.11 2.4E-06 63.7 8.0 52 334-386 406-457 (504)
187 TIGR01311 glycerol_kin glycero 94.1 0.11 2.3E-06 63.7 7.5 51 334-385 399-449 (493)
188 PF14450 FtsA: Cell division p 94.0 0.18 4E-06 48.3 7.5 49 191-242 1-53 (120)
189 TIGR01312 XylB D-xylulose kina 94.0 0.13 2.8E-06 62.9 8.1 51 334-385 390-440 (481)
190 TIGR01234 L-ribulokinase L-rib 93.8 0.14 3E-06 63.4 7.9 51 334-385 435-486 (536)
191 PRK04123 ribulokinase; Provisi 93.8 0.13 2.9E-06 63.8 7.7 80 302-385 409-489 (548)
192 PRK10331 L-fuculokinase; Provi 93.7 0.14 3E-06 62.2 7.7 82 300-385 357-439 (470)
193 KOG2517|consensus 93.6 0.17 3.6E-06 59.7 7.5 53 973-1026 413-465 (516)
194 TIGR01314 gntK_FGGY gluconate 93.5 0.16 3.4E-06 62.4 7.7 51 334-385 401-451 (505)
195 TIGR00555 panK_eukar pantothen 93.5 0.62 1.4E-05 51.3 11.3 46 333-378 229-278 (279)
196 TIGR02627 rhamnulo_kin rhamnul 93.4 0.16 3.5E-06 61.4 7.3 51 334-386 387-437 (454)
197 PRK13317 pantothenate kinase; 93.3 0.25 5.4E-06 54.7 8.1 48 974-1021 222-273 (277)
198 PLN02295 glycerol kinase 93.2 0.2 4.4E-06 61.5 7.9 51 334-385 412-462 (512)
199 PRK03011 butyrate kinase; Prov 93.0 5.3 0.00012 46.1 18.5 45 334-378 295-343 (358)
200 KOG2531|consensus 93.0 0.27 5.8E-06 55.8 7.5 56 966-1022 434-489 (545)
201 PRK10939 autoinducer-2 (AI-2) 92.8 0.22 4.8E-06 61.3 7.5 51 334-385 409-459 (520)
202 KOG2517|consensus 92.6 0.31 6.6E-06 57.6 7.8 75 311-386 390-465 (516)
203 PF14450 FtsA: Cell division p 92.5 0.4 8.6E-06 45.9 7.2 48 831-881 1-52 (120)
204 PRK10640 rhaB rhamnulokinase; 92.5 0.28 6E-06 59.5 7.6 51 334-386 375-425 (471)
205 PF14574 DUF4445: Domain of un 92.3 2.3 5E-05 49.7 14.3 58 297-355 291-348 (412)
206 PRK11031 guanosine pentaphosph 92.0 2 4.2E-05 52.4 14.0 57 150-207 92-150 (496)
207 TIGR00555 panK_eukar pantothen 91.7 1.2 2.6E-05 49.0 10.6 46 973-1018 229-278 (279)
208 PRK10854 exopolyphosphatase; P 91.7 1.3 2.9E-05 54.1 12.2 56 151-207 98-155 (513)
209 KOG0680|consensus 91.6 7.6 0.00016 42.5 15.8 98 776-882 93-198 (400)
210 COG4819 EutA Ethanolamine util 91.4 1.2 2.5E-05 48.5 9.7 72 139-210 90-166 (473)
211 KOG2531|consensus 91.4 0.55 1.2E-05 53.4 7.5 56 326-382 434-489 (545)
212 KOG0681|consensus 90.0 3 6.5E-05 48.7 11.9 123 109-244 89-216 (645)
213 smart00842 FtsA Cell division 89.5 2.4 5.1E-05 44.3 10.1 30 150-179 157-186 (187)
214 TIGR03706 exo_poly_only exopol 89.2 3 6.6E-05 47.2 11.5 54 153-207 89-143 (300)
215 PF13941 MutL: MutL protein 88.9 2.5 5.4E-05 49.9 10.6 59 149-207 197-266 (457)
216 KOG0681|consensus 88.6 0.43 9.4E-06 55.2 4.0 66 317-382 539-614 (645)
217 PF06277 EutA: Ethanolamine ut 88.4 3.5 7.6E-05 48.3 11.2 86 778-872 87-177 (473)
218 TIGR03281 methan_mark_12 putat 86.1 3.3 7.2E-05 45.3 8.7 58 335-394 263-323 (326)
219 TIGR03281 methan_mark_12 putat 85.4 3.4 7.3E-05 45.2 8.3 58 975-1034 263-323 (326)
220 PRK09604 UGMP family protein; 84.7 52 0.0011 37.8 18.3 47 334-380 254-306 (332)
221 COG0248 GppA Exopolyphosphatas 83.6 7 0.00015 47.0 10.8 94 754-848 51-148 (492)
222 COG1548 Predicted transcriptio 83.2 5.6 0.00012 42.0 8.4 69 121-207 76-148 (330)
223 COG0248 GppA Exopolyphosphatas 82.7 8 0.00017 46.5 10.8 94 114-208 51-148 (492)
224 COG0554 GlpK Glycerol kinase [ 81.7 3.7 7.9E-05 47.8 7.2 74 949-1026 376-453 (499)
225 PRK03011 butyrate kinase; Prov 80.7 15 0.00032 42.6 11.8 45 974-1018 295-343 (358)
226 PF01869 BcrAD_BadFG: BadF/Bad 80.5 5.7 0.00012 44.3 8.4 70 948-1020 197-271 (271)
227 PF02541 Ppx-GppA: Ppx/GppA ph 79.5 2.3 5.1E-05 47.8 4.8 54 794-848 76-131 (285)
228 PRK09698 D-allose kinase; Prov 79.3 1.2E+02 0.0025 34.3 23.3 43 162-206 104-146 (302)
229 TIGR00744 ROK_glcA_fam ROK fam 79.2 93 0.002 35.4 18.1 93 752-846 32-140 (318)
230 PF01968 Hydantoinase_A: Hydan 78.6 1.3 2.9E-05 49.7 2.5 67 309-378 216-283 (290)
231 PRK10854 exopolyphosphatase; P 78.3 5.9 0.00013 48.5 8.1 89 757-847 65-155 (513)
232 PRK11031 guanosine pentaphosph 78.1 9.9 0.00022 46.3 9.9 56 791-847 93-150 (496)
233 PF07318 DUF1464: Protein of u 78.1 19 0.00041 40.7 11.1 52 333-385 259-318 (343)
234 PRK00976 hypothetical protein; 76.1 13 0.00029 41.7 9.3 58 974-1033 263-322 (326)
235 COG0554 GlpK Glycerol kinase [ 76.1 7.6 0.00016 45.3 7.5 75 308-386 375-453 (499)
236 PF01968 Hydantoinase_A: Hydan 75.7 1.5 3.2E-05 49.3 1.7 65 951-1018 218-283 (290)
237 PF02541 Ppx-GppA: Ppx/GppA ph 75.5 5.1 0.00011 45.0 6.1 107 118-237 41-151 (285)
238 COG3426 Butyrate kinase [Energ 75.0 30 0.00065 37.4 10.9 48 330-377 292-343 (358)
239 PRK14101 bifunctional glucokin 74.8 42 0.00091 42.5 14.6 20 160-179 103-122 (638)
240 PRK00976 hypothetical protein; 74.3 18 0.00038 40.7 9.6 59 334-394 263-323 (326)
241 TIGR03706 exo_poly_only exopol 73.5 9.3 0.0002 43.3 7.5 89 757-847 54-143 (300)
242 PRK14878 UGMP family protein; 73.3 1.7E+02 0.0038 33.4 20.9 33 334-366 241-276 (323)
243 PLN02666 5-oxoprolinase 72.8 20 0.00044 48.3 11.3 76 940-1018 453-530 (1275)
244 COG5026 Hexokinase [Carbohydra 72.6 9.1 0.0002 44.0 6.9 19 3-21 75-93 (466)
245 KOG1385|consensus 70.9 13 0.00028 42.5 7.5 77 108-207 151-231 (453)
246 PF02543 CmcH_NodU: Carbamoylt 70.0 89 0.0019 36.3 14.5 82 939-1025 131-216 (360)
247 PF02543 CmcH_NodU: Carbamoylt 69.5 81 0.0018 36.6 14.1 82 299-385 131-216 (360)
248 PRK09604 UGMP family protein; 69.3 2.2E+02 0.0047 32.8 18.2 47 974-1020 254-306 (332)
249 PLN02666 5-oxoprolinase 68.3 68 0.0015 43.5 14.6 75 301-378 454-530 (1275)
250 PF03702 UPF0075: Uncharacteri 67.8 19 0.00042 41.5 8.4 73 947-1022 260-337 (364)
251 TIGR00744 ROK_glcA_fam ROK fam 66.8 2.3E+02 0.005 32.2 18.7 92 113-206 33-140 (318)
252 COG0145 HyuA N-methylhydantoin 66.7 5.6 0.00012 49.7 4.1 42 165-207 254-296 (674)
253 COG0145 HyuA N-methylhydantoin 64.9 5.9 0.00013 49.5 3.8 48 799-847 248-296 (674)
254 PRK00292 glk glucokinase; Prov 63.9 36 0.00078 38.8 9.8 46 160-206 88-144 (316)
255 PF07318 DUF1464: Protein of u 62.9 20 0.00043 40.5 7.0 52 973-1025 259-318 (343)
256 COG4819 EutA Ethanolamine util 62.2 28 0.00061 38.3 7.7 72 779-850 90-166 (473)
257 PRK09585 anmK anhydro-N-acetyl 61.5 32 0.00069 39.7 8.6 69 950-1021 265-337 (365)
258 TIGR03723 bact_gcp putative gl 60.5 3E+02 0.0065 31.3 23.6 44 334-377 259-308 (314)
259 PF00370 FGGY_N: FGGY family o 59.4 8.8 0.00019 42.0 3.7 19 4-22 1-19 (245)
260 KOG1385|consensus 55.3 23 0.0005 40.5 5.9 77 748-847 151-231 (453)
261 PF03702 UPF0075: Uncharacteri 55.1 45 0.00099 38.5 8.5 67 310-381 263-336 (364)
262 PRK00180 acetate kinase A/prop 53.1 1.4E+02 0.003 35.1 11.9 46 950-998 302-348 (402)
263 cd06007 R3H_DEXH_helicase R3H 52.2 42 0.00091 27.4 5.4 38 767-806 7-44 (59)
264 TIGR00143 hypF [NiFe] hydrogen 51.1 34 0.00075 43.4 7.3 48 334-381 658-711 (711)
265 cd06007 R3H_DEXH_helicase R3H 50.9 45 0.00098 27.2 5.4 37 128-166 8-44 (59)
266 TIGR00143 hypF [NiFe] hydrogen 50.8 34 0.00073 43.5 7.1 62 955-1021 644-711 (711)
267 COG2377 Predicted molecular ch 49.8 97 0.0021 35.3 9.6 51 972-1022 288-343 (371)
268 smart00732 YqgFc Likely ribonu 49.6 14 0.0003 33.7 2.7 18 4-21 2-19 (99)
269 PRK09585 anmK anhydro-N-acetyl 49.6 71 0.0015 36.9 8.8 61 318-381 273-337 (365)
270 COG2377 Predicted molecular ch 49.3 1.5E+02 0.0033 33.9 11.0 52 331-382 287-343 (371)
271 PF08735 DUF1786: Putative pyr 47.8 1.9E+02 0.004 31.5 11.0 100 102-207 81-185 (254)
272 TIGR03123 one_C_unchar_1 proba 46.9 18 0.00038 40.9 3.4 32 173-208 116-147 (318)
273 PF03652 UPF0081: Uncharacteri 45.9 21 0.00045 34.9 3.4 21 4-24 2-22 (135)
274 TIGR03123 one_C_unchar_1 proba 45.4 17 0.00037 41.0 3.0 20 829-848 128-147 (318)
275 cd00529 RuvC_resolvase Hollida 45.3 27 0.00058 35.0 4.2 18 4-21 1-18 (154)
276 COG5026 Hexokinase [Carbohydra 45.0 1.5E+02 0.0032 34.7 10.1 50 795-847 187-238 (466)
277 COG3426 Butyrate kinase [Energ 44.1 31 0.00067 37.3 4.4 49 970-1018 292-344 (358)
278 TIGR00016 ackA acetate kinase. 44.0 3E+02 0.0065 32.3 12.7 44 952-998 308-352 (404)
279 cd02640 R3H_NRF R3H domain of 40.5 87 0.0019 25.7 5.6 42 125-167 5-46 (60)
280 cd02640 R3H_NRF R3H domain of 39.9 1.1E+02 0.0024 25.1 6.1 42 765-807 5-46 (60)
281 PF00349 Hexokinase_1: Hexokin 39.5 44 0.00095 35.3 4.9 25 826-850 60-84 (206)
282 COG0816 Predicted endonuclease 39.0 30 0.00065 33.9 3.2 22 2-23 1-22 (141)
283 PRK14878 UGMP family protein; 39.0 6.4E+02 0.014 28.8 18.4 32 974-1005 241-275 (323)
284 PF00349 Hexokinase_1: Hexokin 38.4 45 0.00098 35.3 4.8 26 186-211 60-85 (206)
285 TIGR03723 bact_gcp putative gl 37.9 75 0.0016 36.2 6.8 44 974-1017 259-308 (314)
286 PRK00109 Holliday junction res 37.8 32 0.00069 33.8 3.3 21 3-23 4-24 (138)
287 KOG2708|consensus 37.4 3.5E+02 0.0076 28.5 10.5 74 940-1018 224-300 (336)
288 COG4012 Uncharacterized protei 36.9 1.2E+02 0.0027 32.5 7.4 67 808-882 208-274 (342)
289 TIGR00329 gcp_kae1 metallohydr 35.8 6.9E+02 0.015 28.2 14.4 37 317-358 246-282 (305)
290 PF08735 DUF1786: Putative pyr 35.3 5.1E+02 0.011 28.3 11.9 100 742-847 81-185 (254)
291 KOG2708|consensus 34.3 4.6E+02 0.01 27.7 10.8 74 300-378 224-300 (336)
292 COG2192 Predicted carbamoyl tr 33.8 9.5E+02 0.021 29.3 16.8 82 300-385 255-338 (555)
293 cd02641 R3H_Smubp-2_like R3H d 33.0 1.4E+02 0.0031 24.4 5.8 43 764-807 4-46 (60)
294 PRK00180 acetate kinase A/prop 32.5 2.2E+02 0.0048 33.4 9.4 46 310-358 302-348 (402)
295 PRK00039 ruvC Holliday junctio 32.0 39 0.00084 34.3 2.9 20 2-21 1-20 (164)
296 PRK07058 acetate kinase; Provi 31.1 1E+02 0.0022 35.9 6.3 46 309-358 297-343 (396)
297 PRK09698 D-allose kinase; Prov 31.1 7.9E+02 0.017 27.5 19.4 48 974-1021 236-295 (302)
298 COG4012 Uncharacterized protei 30.6 1.9E+02 0.004 31.3 7.4 86 142-241 185-273 (342)
299 PF02075 RuvC: Crossover junct 29.7 76 0.0016 31.6 4.5 24 5-28 1-26 (149)
300 COG4020 Uncharacterized protei 29.5 6E+02 0.013 27.4 10.8 59 331-391 265-326 (332)
301 PRK09605 bifunctional UGMP fam 29.4 1.3E+02 0.0029 37.1 7.7 52 974-1025 245-302 (535)
302 PRK07058 acetate kinase; Provi 28.4 5.4E+02 0.012 30.1 11.5 45 950-998 298-343 (396)
303 cd02641 R3H_Smubp-2_like R3H d 28.3 1.8E+02 0.004 23.8 5.7 41 125-166 5-45 (60)
304 smart00030 CLb CLUSTERIN Beta 28.3 5.3E+02 0.011 26.8 9.9 79 1148-1240 4-84 (206)
305 COG0533 QRI7 Metal-dependent p 28.0 1.5E+02 0.0034 33.5 6.9 41 313-358 245-285 (342)
306 PLN02362 hexokinase 27.7 1.2E+02 0.0026 36.9 6.4 50 152-204 208-259 (509)
307 TIGR00329 gcp_kae1 metallohydr 27.6 9.3E+02 0.02 27.2 15.1 37 957-998 246-282 (305)
308 cd02646 R3H_G-patch R3H domain 27.6 1.4E+02 0.003 24.2 4.9 41 123-166 3-43 (58)
309 PRK05082 N-acetylmannosamine k 27.6 2E+02 0.0044 32.2 8.2 48 974-1021 233-287 (291)
310 COG0533 QRI7 Metal-dependent p 27.4 1.7E+02 0.0036 33.3 7.0 69 943-1017 231-306 (342)
311 smart00842 FtsA Cell division 27.3 1.6E+02 0.0035 30.5 6.8 28 791-818 158-185 (187)
312 cd02646 R3H_G-patch R3H domain 26.9 1.4E+02 0.0031 24.2 4.8 42 762-806 2-43 (58)
313 KOG1369|consensus 26.8 86 0.0019 37.3 4.9 152 3-200 86-242 (474)
314 COG4020 Uncharacterized protei 26.5 5.3E+02 0.011 27.8 9.8 58 972-1031 266-326 (332)
315 PRK09605 bifunctional UGMP fam 26.5 1.7E+02 0.0037 36.2 7.9 50 334-383 245-300 (535)
316 PRK09557 fructokinase; Reviewe 25.7 1.2E+02 0.0027 34.1 6.0 47 974-1020 244-299 (301)
317 TIGR02707 butyr_kinase butyrat 25.5 1.7E+02 0.0037 33.8 7.0 65 950-1017 272-340 (351)
318 PLN02405 hexokinase 24.7 1.3E+02 0.0027 36.5 5.9 54 152-208 208-263 (497)
319 PTZ00340 O-sialoglycoprotein e 24.6 1.6E+02 0.0034 33.9 6.4 38 956-998 250-287 (345)
320 COG2192 Predicted carbamoyl tr 24.1 1.4E+03 0.03 28.0 16.4 82 939-1024 254-337 (555)
321 PTZ00340 O-sialoglycoprotein e 24.0 1.7E+02 0.0037 33.7 6.4 39 315-358 249-287 (345)
322 KOG1794|consensus 24.0 2.1E+02 0.0045 31.6 6.6 81 301-385 232-319 (336)
323 cd02639 R3H_RRM R3H domain of 24.0 1.4E+02 0.003 24.5 4.2 30 778-807 17-46 (60)
324 PRK13310 N-acetyl-D-glucosamin 24.0 2.5E+02 0.0054 31.7 8.1 47 974-1020 245-300 (303)
325 KOG1794|consensus 23.9 2.2E+02 0.0047 31.4 6.7 50 976-1025 265-319 (336)
326 PRK05082 N-acetylmannosamine k 23.6 2.8E+02 0.006 31.1 8.3 48 334-381 233-287 (291)
327 PLN03173 chalcone synthase; Pr 23.0 2.1E+02 0.0045 33.8 7.2 51 312-362 101-152 (391)
328 PF03646 FlaG: FlaG protein; 23.0 1.2E+02 0.0025 28.3 4.2 44 1113-1163 55-99 (107)
329 PLN02377 3-ketoacyl-CoA syntha 22.6 2E+02 0.0043 35.0 7.0 55 307-361 166-221 (502)
330 TIGR02707 butyr_kinase butyrat 22.6 2.1E+02 0.0046 33.1 7.0 44 334-377 293-340 (351)
331 PLN00130 succinate dehydrogena 22.6 12 0.00027 37.0 -2.5 21 4-24 58-78 (213)
332 PF02685 Glucokinase: Glucokin 22.3 7.3E+02 0.016 28.2 11.2 197 800-1021 88-314 (316)
333 PF14574 DUF4445: Domain of un 22.3 2.5E+02 0.0054 33.2 7.6 55 946-1000 55-109 (412)
334 PF07066 DUF3882: Lactococcus 22.2 1.3E+02 0.0028 29.3 4.1 23 2-24 1-28 (159)
335 PLN02914 hexokinase 22.1 1.6E+02 0.0035 35.6 6.0 55 152-209 208-264 (490)
336 PRK13318 pantothenate kinase; 21.8 89 0.0019 34.4 3.7 20 5-24 2-21 (258)
337 PRK12397 propionate kinase; Re 21.7 8.7E+02 0.019 28.6 11.6 44 951-998 302-346 (404)
338 PRK09557 fructokinase; Reviewe 21.5 1.7E+02 0.0036 33.1 6.0 43 162-206 96-139 (301)
339 PLN03172 chalcone synthase fam 21.5 2.3E+02 0.0049 33.5 7.1 52 311-362 100-152 (393)
340 PLN02377 3-ketoacyl-CoA syntha 21.4 2.2E+02 0.0048 34.6 7.1 56 946-1001 165-221 (502)
341 PLN03170 chalcone synthase; Pr 21.4 2.1E+02 0.0045 33.9 6.8 52 311-362 104-156 (401)
342 TIGR00250 RNAse_H_YqgF RNAse H 21.3 57 0.0012 31.7 1.8 17 6-22 1-17 (130)
343 PLN03173 chalcone synthase; Pr 21.3 2.4E+02 0.0052 33.3 7.3 52 951-1002 100-152 (391)
344 PRK12440 acetate kinase; Revie 21.1 1.4E+03 0.03 26.9 13.3 44 951-998 301-345 (397)
345 PTZ00107 hexokinase; Provision 20.9 1.5E+02 0.0032 35.7 5.4 161 3-200 74-248 (464)
346 PLN02596 hexokinase-like 20.7 2.3E+02 0.005 34.3 7.0 54 153-209 209-264 (490)
347 cd02639 R3H_RRM R3H domain of 20.7 1.8E+02 0.0038 24.0 4.1 31 137-167 16-46 (60)
348 PRK13321 pantothenate kinase; 20.6 95 0.0021 34.1 3.6 19 5-23 2-20 (256)
349 PRK14101 bifunctional glucokin 20.5 1.1E+03 0.024 29.8 13.6 22 798-819 101-122 (638)
350 PLN03170 chalcone synthase; Pr 20.4 2.3E+02 0.0049 33.6 6.8 52 951-1002 104-156 (401)
351 PLN03172 chalcone synthase fam 20.3 2.5E+02 0.0054 33.1 7.2 53 950-1002 99-152 (393)
No 1
>KOG0100|consensus
Probab=100.00 E-value=4e-126 Score=992.29 Aligned_cols=591 Identities=51% Similarity=0.796 Sum_probs=568.5
Q ss_pred ccccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCCh
Q psy5911 642 IYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 721 (1242)
Q Consensus 642 ~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~ 721 (1242)
+..++|||+||+++||+|+.+|++++|.|++|+|.+||+|+|+++ ++++|++|++++..||+||+++.||||||.++|+
T Consensus 35 ~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~d-erLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~ 113 (663)
T KOG0100|consen 35 LGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDD-ERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDK 113 (663)
T ss_pred cceEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccc-hhhhhhHhhcccccCcccceechHHHhCcccCCh
Confidence 445899999999999999999999999999999999999999988 8999999999999999999999999999999999
Q ss_pred hHHhhcccCceEEEEcCCCCeEEE--Ec---CeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHH
Q psy5911 722 IVQKDIKMVPYKIVAADNGDAWVE--VK---DQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATK 796 (1242)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~ 796 (1242)
.+|++++.|||+++. .++++.+. +. .+.|+|+++++|+|.++++.|+.|+|.++.++|+||||||++.||++++
T Consensus 114 ~vq~Dik~~Pfkvv~-k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATK 192 (663)
T KOG0100|consen 114 SVQKDIKFLPFKVVN-KDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 192 (663)
T ss_pred hhhhhhhcCceEEEc-CCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhc
Confidence 999999999999884 34455554 44 2589999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHH
Q psy5911 797 DAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 876 (1242)
Q Consensus 797 ~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~ 876 (1242)
+|..+|||+++|+||||+|||++||+++...++++||||+||||||||++.+++ +.|+|+++.||.+|||+|||.+
T Consensus 193 DAGtIAgLnV~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdn----GVFeVlaTnGDThLGGEDFD~r 268 (663)
T KOG0100|consen 193 DAGTIAGLNVVRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDN----GVFEVLATNGDTHLGGEDFDQR 268 (663)
T ss_pred ccceeccceEEEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcC----ceEEEEecCCCcccCccchHHH
Confidence 999999999999999999999999999998999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHH
Q psy5911 877 IINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISK 956 (1242)
Q Consensus 877 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~ 956 (1242)
.++|+.+-|+++++.|++.+.+++++|+++||+||+.||++.++.+.++++.++. +|+-++||+.||++..++|.+
T Consensus 269 vm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~----DfSEtLtRAkFEElNmDLFr~ 344 (663)
T KOG0100|consen 269 VMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGV----DFSETLTRAKFEELNMDLFRK 344 (663)
T ss_pred HHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccc----cccchhhhhHHHHhhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999988764 499999999999999999999
Q ss_pred HHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-cccccccCCcchhhhhhHHHhhhhhccc--ccceEEe
Q psy5911 957 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLSGV--VKDVLLL 1033 (1242)
Q Consensus 957 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~~~~~p~~aVa~GAa~~a~~l~~~--~~~~~~~ 1033 (1242)
++.+++++|+++++.+++|+.|+|||||+|||.||++|+++| |+++.+.+||+||||+|||.+|+.+||. ..++++.
T Consensus 345 TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGee~t~divLL 424 (663)
T KOG0100|consen 345 TLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGEEDTGDIVLL 424 (663)
T ss_pred hhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccccCcCcEEEE
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999994 5689999
Q ss_pred ecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEE
Q psy5911 1034 DVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQI 1113 (1242)
Q Consensus 1034 ~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i 1113 (1242)
|++|+++||++.+|.|..+||||+.||+++++.|+|..|+|+.+.|++|+||+++..+|+.||.|.|+||||+|+|.|+|
T Consensus 425 Dv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqI 504 (663)
T KOG0100|consen 425 DVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQI 504 (663)
T ss_pred eeccccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCeeEEEEEEecCCCceEEEEEccCC-CCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhh
Q psy5911 1114 EVSFDLDANGILNVTAKDKKTGKEQSIIIKSSG-GLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLK 1192 (1242)
Q Consensus 1114 ~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~-~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~ 1192 (1242)
+|||++|.||+|+|+|.++.+|+..+++|.++. +|++++|++|+++++++.++|+..+++.++||+||+|.|++++.+.
T Consensus 505 EVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~ 584 (663)
T KOG0100|consen 505 EVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIG 584 (663)
T ss_pred EEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccC
Confidence 999999999999999999999999999999885 5999999999999999999999999999999999999999999994
Q ss_pred ---hccCCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1193 ---DENTKITDEEKESIEKSISNLELLIKGD---DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1193 ---~~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
.....+++++++.+..++++..+||+++ +.++|++++++|+.+|.||+++
T Consensus 585 dkekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~Piisk 640 (663)
T KOG0100|consen 585 DKEKLGGKLSDEDKETIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISK 640 (663)
T ss_pred chhHhcccCChhHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999987 6899999999999999999863
No 2
>KOG0100|consensus
Probab=100.00 E-value=1.2e-120 Score=951.08 Aligned_cols=575 Identities=51% Similarity=0.799 Sum_probs=550.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|..|||||||||||||+++++|+++||.|.+|+|.+||+|+|+++ ++++|++|+++...||+||+++.|||||++|+|+
T Consensus 35 ~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~d-erLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~ 113 (663)
T KOG0100|consen 35 LGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDD-ERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDK 113 (663)
T ss_pred cceEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccc-hhhhhhHhhcccccCcccceechHHHhCcccCCh
Confidence 678999999999999999999999999999999999999999987 8999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEE--c---CeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEV--K---DKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATK 156 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~ 156 (1242)
.+|++.++|||+++.. ++.+++++ + .+.|+|+++++|+|.++++.|+.|+|.++.++|+||||||++.||++++
T Consensus 114 ~vq~Dik~~Pfkvv~k-~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATK 192 (663)
T KOG0100|consen 114 SVQKDIKFLPFKVVNK-DGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 192 (663)
T ss_pred hhhhhhhcCceEEEcC-CCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhc
Confidence 9999999999999854 44555554 4 3679999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 157 DAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 157 ~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
+|..+|||+++|+||||+|||++|++++...++++||||+||||||||++.+++ +.|+|+++.||.+|||+|||++
T Consensus 193 DAGtIAgLnV~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdn----GVFeVlaTnGDThLGGEDFD~r 268 (663)
T KOG0100|consen 193 DAGTIAGLNVVRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDN----GVFEVLATNGDTHLGGEDFDQR 268 (663)
T ss_pred ccceeccceEEEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcC----ceEEEEecCCCcccCccchHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHH
Q psy5911 237 IINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISK 316 (1242)
Q Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~ 316 (1242)
+++|+.+-|+++++.|++.+.+++++|+++||++|+.||+..++.++++++.++ .+|+-++||..||++..++|.+
T Consensus 269 vm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG----~DfSEtLtRAkFEElNmDLFr~ 344 (663)
T KOG0100|consen 269 VMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDG----VDFSETLTRAKFEELNMDLFRK 344 (663)
T ss_pred HHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeecccc----ccccchhhhhHHHHhhhHHHHH
Confidence 999999999999999999999999999999999999999999999999998876 6799999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc-ccccccCCCcchhhHhHHHHhhhhhcC--CccceEEE
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLSG--VVKDVLLL 393 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~~~~~~~p~~ava~GAa~~a~~l~~--~~~~~~~~ 393 (1242)
++.+++++|+++++.+.+|+.|+|||||+|||.||++|+++| |+++...+||+||||+|||++|+.+|| ...++++.
T Consensus 345 TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGee~t~divLL 424 (663)
T KOG0100|consen 345 TLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGEEDTGDIVLL 424 (663)
T ss_pred hhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccccCcCcEEEE
Confidence 999999999999999999999999999999999999999999 899999999999999999999999999 46789999
Q ss_pred eeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEE
Q psy5911 394 DVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQI 473 (1242)
Q Consensus 394 d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i 473 (1242)
|++|+++||++-+|.|..+|||||.||+++++.|+++.|||+.+.|++|+|||.+..+|+.||+|.++|+||+|+|.|+|
T Consensus 425 Dv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqI 504 (663)
T KOG0100|consen 425 DVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQI 504 (663)
T ss_pred eeccccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCeeEEEEEEEcCCCcEEEEEEecC-CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHHHHHHhhhH
Q psy5911 474 EVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIILEEKFCSFV 552 (1242)
Q Consensus 474 ~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~~~~~~~~~ 552 (1242)
+|+|++|.||+|+|+|.|+.+|+..+++|+++ ..|++|++++|+.++++++++|+..+++.+.+|++ +.|.+.+
T Consensus 505 EVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~L-----E~Yaysl 579 (663)
T KOG0100|consen 505 EVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNEL-----ESYAYSL 579 (663)
T ss_pred EEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHH-----HHHHHHh
Confidence 99999999999999999999999999999987 56999999999999999999999999999999999 6677777
Q ss_pred HHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhh
Q psy5911 553 LETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMF 591 (1242)
Q Consensus 553 a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a 591 (1242)
...-+.+..+...+++..|..+++.+++.+.||+.-+.|
T Consensus 580 Knqi~dkekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a 618 (663)
T KOG0100|consen 580 KNQIGDKEKLGGKLSDEDKETIEDAVEEALEWLESNQDA 618 (663)
T ss_pred hhccCchhHhcccCChhHHHHHHHHHHHHHHHHhhcccc
Confidence 777777777888888888999999999999999855444
No 3
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=2.8e-97 Score=901.17 Aligned_cols=591 Identities=54% Similarity=0.856 Sum_probs=562.3
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
.++|||+||+++++++++.|++++++|..|.+.+||+|+|.++ .+++|..|+.+...+|.++++++||+||+.+.++.+
T Consensus 28 ~viGIDLGTTnS~vA~~~~~~~~ii~n~~g~r~tPS~V~f~~~-~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~~~d~~v 106 (657)
T PTZ00186 28 DVIGVDLGTTYSCVATMDGDKARVLENSEGFRTTPSVVAFKGS-EKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEHI 106 (657)
T ss_pred eEEEEEeCcCeEEEEEEeCCceEEeecCCCCcccceEEEECCC-CEEEcHHHHHhhhhCchhHHHHHHHHhccccccHHH
Confidence 3789999999999999999999999999999999999999865 689999999999999999999999999999999999
Q ss_pred HhhcccCceEEEEcCCCCeEEEE-cCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEV-KDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
+...+.|||.++...++...+.. .++.++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||++|
T Consensus 107 ~~~~~~~p~~vv~~~~~~~~i~~~~~~~~speeisa~iL~~Lk~~Ae~~lg~~v~~aVITVPayF~~~qR~at~~Aa~~A 186 (657)
T PTZ00186 107 QKDIKNVPYKIVRAGNGDAWVQDGNGKQYSPSQIGAFVLEKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTIA 186 (657)
T ss_pred HHhhccCcEEEEEcCCCceEEEeCCCeEEcHHHHHHHHHHHHHHHHHHHhCCccceEEEEECCCCChHHHHHHHHHHHHc
Confidence 99999999999988888887776 36789999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
||+++++++||+|||++|+.... .+++++|||+||||||+|++++.+ +.++++++.|+.+|||+|||.+|++|+.
T Consensus 187 Gl~v~rlInEPtAAAlayg~~~~-~~~~vlV~DlGGGT~DvSil~~~~----g~~~V~at~Gd~~LGG~DfD~~l~~~~~ 261 (657)
T PTZ00186 187 GLNVIRVVNEPTAAALAYGMDKT-KDSLIAVYDLGGGTFDISVLEIAG----GVFEVKATNGDTHLGGEDFDLALSDYIL 261 (657)
T ss_pred CCCeEEEEcChHHHHHHHhccCC-CCCEEEEEECCCCeEEEEEEEEeC----CEEEEEEecCCCCCCchhHHHHHHHHHH
Confidence 99999999999999999998764 568999999999999999999987 8999999999999999999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+.++..++.+.|||++|+++++|+++++..+++
T Consensus 262 ~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v~ 341 (657)
T PTZ00186 262 EEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPCK 341 (657)
T ss_pred HHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889999999999999999999999999999988766555556789999999999999999999999999
Q ss_pred HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeE
Q psy5911 963 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi 1042 (1242)
++|+++++++.+|+.|+||||+||||.|+++|+++||.++....||++|||+|||++|+++++..+++.+.|++|++|||
T Consensus 342 ~~L~~a~~~~~dId~VvLVGGssriP~V~~~l~~~fg~~~~~~~nPdeaVA~GAAi~a~~l~~~~~~~~l~Dv~p~slgi 421 (657)
T PTZ00186 342 QCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFFQKDPFRGVNPDEAVALGAATLGGVLRGDVKGLVLLDVTPLSLGI 421 (657)
T ss_pred HHHHHcCCChhhCCEEEEECCcccChHHHHHHHHHhCCCccccCCCchHHHHhHHHHHHHhccccCceEEEeeccccccc
Confidence 99999999999999999999999999999999999998888999999999999999999999988899999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.++.|.+|||||++||+++++.|++..|||+.+.|+||||++..+.+|..||+|.|.++||.|+|.++|+|+|++|.|
T Consensus 422 e~~~g~~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf~iD~n 501 (657)
T PTZ00186 422 ETLGGVFTRMIPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTFDIDAN 501 (657)
T ss_pred eecCCEEEEEEeCCCEeeEEEeeccccccCCCceEEEEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+|+|++.++.||++.++.|..+.+|+++++++|+++++++..+|+..++..+++|+++.+++.+++.+++. ..+++++
T Consensus 502 GiL~V~a~d~~tg~~~~~~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 580 (657)
T PTZ00186 502 GICHVTAKDKATGKTQNITITANGGLSKEQIEQMIRDSEQHAEADRVKRELVEVRNNAETQLTTAERQLGEW-KYVSDAE 580 (657)
T ss_pred CEEEEEEEEccCCcEEEEEeccCccCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHH
Confidence 999999999999999999999888899999999999999999999999999999999999999999999653 4689999
Q ss_pred HHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhh
Q psy5911 1203 KESIEKSISNLELLIKGD--DIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~--~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
++.+...++.+++||.++ +.+.+++++++|++.+.+++.
T Consensus 581 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 621 (657)
T PTZ00186 581 KENVKTLVAELRKAMENPNVAKDDLAAATDKLQKAVMECGR 621 (657)
T ss_pred HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 459999999999999988764
No 4
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.1e-96 Score=906.10 Aligned_cols=592 Identities=54% Similarity=0.842 Sum_probs=563.8
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
.++|||+||+|++++++++|.+.+++|..|++.+||+|+|.+++++++|..|+.+...+|.++++++|||||+.+.++.
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~- 81 (653)
T PRK13411 3 KVIGIDLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAENTVYSIKRFIGRRWDDTE- 81 (653)
T ss_pred cEEEEEeCcccEEEEEEECCEEEEEECCCCCccCceEEEEeCCCCEEEcHHHHHhhhhCcccchHHHHHHhCCCccchh-
Confidence 4789999999999999999999999999999999999999877789999999999999999999999999999998864
Q ss_pred HhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAG 803 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AG 803 (1242)
...+++||.++...++.+.+.+.+..++|+++++++|++|++.|+.++|.++.++|||||+||++.||++|++||++||
T Consensus 82 -~~~~~~~~~~v~~~~~~~~~~i~~~~~~peei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AG 160 (653)
T PRK13411 82 -EERSRVPYTCVKGRDDTVNVQIRGRNYTPQEISAMILQKLKQDAEAYLGEPVTQAVITVPAYFTDAQRQATKDAGTIAG 160 (653)
T ss_pred -HHhhcCCceEEecCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCcHHHHHHHHHHHHcC
Confidence 3567899999998888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHH
Q psy5911 804 LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 883 (1242)
Q Consensus 804 l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 883 (1242)
|+++++++||+|||++|+......++++||||+||||||+|++++.+ +.++++++.|+.+|||++||..|++|+.+
T Consensus 161 l~v~~li~EPtAAAl~y~~~~~~~~~~vlV~DlGgGT~dvsi~~~~~----~~~~V~at~gd~~LGG~dfD~~l~~~l~~ 236 (653)
T PRK13411 161 LEVLRIINEPTAAALAYGLDKQDQEQLILVFDLGGGTFDVSILQLGD----GVFEVKATAGNNHLGGDDFDNCIVDWLVE 236 (653)
T ss_pred CCeEEEecchHHHHHHhcccccCCCCEEEEEEcCCCeEEEEEEEEeC----CEEEEEEEecCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999987665678899999999999999999987 89999999999999999999999999999
Q ss_pred HhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 884 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 963 (1242)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~ 963 (1242)
+|+.+++.++..+++++.+|+.+||++|+.||....+.+.++++..+..++.++.+.|||++|++++.|+++++..+|++
T Consensus 237 ~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i~~ 316 (653)
T PRK13411 237 NFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEELTKDLVEATIEPMQQ 316 (653)
T ss_pred HHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888899999999999999999999999999999887655545677899999999999999999999999999
Q ss_pred HHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc-ccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeE
Q psy5911 964 ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 964 ~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi 1042 (1242)
+|+++++.+.+|+.|+||||+||||+|++.|+++|+ .++..++||++|||+|||++|+++++..+++.+.|++|++||+
T Consensus 317 ~L~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~~~~~~~~~dv~p~slgi 396 (653)
T PRK13411 317 ALKDAGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGGEVKDLLLLDVTPLSLGI 396 (653)
T ss_pred HHHHcCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcCCccceeeeecccceeeE
Confidence 999999999999999999999999999999999996 6788899999999999999999999888999999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.++.|.+|||||++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.+.++|+.|.|.++|+|+|++|.|
T Consensus 397 ~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 476 (653)
T PRK13411 397 ETLGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVSFEIDVN 476 (653)
T ss_pred EecCCceEEEEECCCcccceeeEEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+|+|++.+..+|++..+.+....+|++++++++++++.++.++|+..+++.+++|+||+|+|.+++.|+++..++++++
T Consensus 477 Gil~v~a~d~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~~~~~~~~~~e 556 (653)
T PRK13411 477 GILKVSAQDQGTGREQSIRITNTGGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQADSLLYSYESTLKENGELISEEL 556 (653)
T ss_pred CeEEEEEeeccCCceEeeEEeccccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHH
Confidence 99999999999999999999877789999999999999999999999999999999999999999999977778999999
Q ss_pred HHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhh
Q psy5911 1203 KESIEKSISNLELLIKGD--DIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~--~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
|+++...++++++||+++ +.+++++++++|++.+.+++.
T Consensus 557 r~~i~~~l~~~~~wL~~~~~~~~~~~~~~~el~~~~~~i~~ 597 (653)
T PRK13411 557 KQRAEQKVEQLEAALTDPNISLEELKQQLEEFQQALLAIGA 597 (653)
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986 489999999999999999875
No 5
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=9e-97 Score=906.61 Aligned_cols=593 Identities=60% Similarity=0.929 Sum_probs=569.6
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
+++|||+||+|+++++++.|.+++++|..|++.+||+|+|.+++++++|..|+.+...+|.++++++|||||+.++|+.+
T Consensus 42 ~viGIDlGTt~s~va~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~ 121 (663)
T PTZ00400 42 DIVGIDLGTTNSCVAIMEGSQPKVIENSEGMRTTPSVVAFTEDGQRLVGIVAKRQAVTNPENTVFATKRLIGRRYDEDAT 121 (663)
T ss_pred cEEEEEECcccEEEEEEeCCeeEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhHHhCCcceehhhhhhcCCCcCcHHH
Confidence 47899999999999999999999999999999999999998777899999999999999999999999999999999999
Q ss_pred HhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAG 803 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AG 803 (1242)
+...+.+||.++..+++...+.+++..++|+++++++|++|++.++.++|.++.++|||||+||++.||++|++||++||
T Consensus 122 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AG 201 (663)
T PTZ00400 122 KKEQKILPYKIVRASNGDAWIEAQGKKYSPSQIGAFVLEKMKETAESYLGRKVKQAVITVPAYFNDSQRQATKDAGKIAG 201 (663)
T ss_pred HhhhccCCeEEEecCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHH
Q psy5911 804 LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 883 (1242)
Q Consensus 804 l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 883 (1242)
|+++++++||+|||++|+.... .++++||||+||||||+|++++.+ +.++++++.|+.++||++||..|++|+.+
T Consensus 202 l~v~~li~EptAAAlay~~~~~-~~~~vlV~DlGgGT~DvSv~~~~~----g~~~v~a~~gd~~LGG~d~D~~l~~~l~~ 276 (663)
T PTZ00400 202 LDVLRIINEPTAAALAFGMDKN-DGKTIAVYDLGGGTFDISILEILG----GVFEVKATNGNTSLGGEDFDQRILNYLIA 276 (663)
T ss_pred CceEEEeCchHHHHHHhccccC-CCcEEEEEeCCCCeEEEEEEEecC----CeeEEEecccCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999998754 567899999999999999999976 88999999999999999999999999999
Q ss_pred HhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 884 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 963 (1242)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~ 963 (1242)
+|+.+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+..++.++.++|||++|+++|+|++.++.+++++
T Consensus 277 ~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i~~ 356 (663)
T PTZ00400 277 EFKKQQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINLPFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPCEK 356 (663)
T ss_pred HhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEEEeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888899999999999999999999999899999887766556678999999999999999999999999999
Q ss_pred HHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeEE
Q psy5911 964 ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGIE 1043 (1242)
Q Consensus 964 ~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi~ 1043 (1242)
+|+++++.+.+|+.|+||||+||+|+|+++|+++||.++...+||+++||+|||++|+++++..+++.+.|++|++||++
T Consensus 357 ~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f~~~~~~~~npdeaVA~GAAi~aa~l~~~~~~~~~~dv~p~slgi~ 436 (663)
T PTZ00400 357 CIKDAGVKKDELNDVILVGGMTRMPKVSETVKKIFGKEPSKGVNPDEAVAMGAAIQAGVLKGEIKDLLLLDVTPLSLGIE 436 (663)
T ss_pred HHHHcCCCHHHCcEEEEECCccCChHHHHHHHHHhCCCcccCCCCccceeeccHHHHHhhcCCccceEEEeccccceEEE
Confidence 99999999999999999999999999999999999998999999999999999999999999888999999999999999
Q ss_pred EeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCCe
Q psy5911 1044 TMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDANG 1123 (1242)
Q Consensus 1044 ~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~g 1123 (1242)
+.+|.|.++||+|++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.+.++|+.|.|.++|+|+|++|.||
T Consensus 437 ~~~g~~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~G 516 (663)
T PTZ00400 437 TLGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDVDANG 516 (663)
T ss_pred ecCCeeEEEEecCccCCccceeeeeeccCCCceEEEEEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHHH
Q psy5911 1124 ILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEEK 1203 (1242)
Q Consensus 1124 ~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~~ 1203 (1242)
+|+|++.+..+|++.++.|....+|++++++++++++.++.++|+..+++.+++|+||+|+|.+++.|+++...++++++
T Consensus 517 il~v~a~~~~~~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~e~~~~~s~~er 596 (663)
T PTZ00400 517 IMNISAVDKSTGKKQEITIQSSGGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKNEAETLIYSVEKQLSDLKDKISDADK 596 (663)
T ss_pred CEEEEEEeccCCcEEEEEeeccccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCHHHH
Confidence 99999999999999999998777899999999999999999999999999999999999999999999768889999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1204 ESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1204 ~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
+++.+.++++++||++++.+++++++++|++.+.+++.
T Consensus 597 e~i~~~l~~~~~WL~~~d~~~i~~k~~eL~~~l~~l~~ 634 (663)
T PTZ00400 597 DELKQKITKLRSTLSSEDVDSIKDKTKQLQEASWKISQ 634 (663)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999874
No 6
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=2.2e-96 Score=898.64 Aligned_cols=591 Identities=50% Similarity=0.817 Sum_probs=557.9
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
..++|||+||++|+++++++|++.++.|..|.+.+||+|+|.+++++++|..|+.++..+|.++++++||+||+++.+
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~~~~-- 79 (668)
T PRK13410 2 GRIVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKDGELLVGQLARRQLVLNPQNTFYNLKRFIGRRYDE-- 79 (668)
T ss_pred CcEEEEEeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeCCCCEEECHHHHHhhHhCccceehHHhhhhCCCchh--
Confidence 357899999999999999999999999999999999999998777899999999999999999999999999999865
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEc--CeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVK--DQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
++...+.+||.+...++|.+.+.+. ++.++|+++++++|++|++.++.++|.++.++|||||+||++.||++|++||+
T Consensus 80 ~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 159 (668)
T PRK13410 80 LDPESKRVPYTIRRNEQGNVRIKCPRLEREFAPEELSAMILRKLADDASRYLGEPVTGAVITVPAYFNDSQRQATRDAGR 159 (668)
T ss_pred hHHhhccCCeEEEECCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 4556788999999988888888763 57899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINH 880 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~ 880 (1242)
+|||+++++++||+|||++|+.... .++++||||+||||||+|++++.+ +.++++++.|+.+|||++||..|++|
T Consensus 160 ~AGl~v~~li~EPtAAAlayg~~~~-~~~~vlV~DlGgGT~Dvsv~~~~~----g~~~V~at~gd~~lGG~dfD~~l~~~ 234 (668)
T PRK13410 160 IAGLEVERILNEPTAAALAYGLDRS-SSQTVLVFDLGGGTFDVSLLEVGN----GVFEVKATSGDTQLGGNDFDKRIVDW 234 (668)
T ss_pred HcCCCeEEEecchHHHHHHhccccC-CCCEEEEEECCCCeEEEEEEEEcC----CeEEEEEeecCCCCChhHHHHHHHHH
Confidence 9999999999999999999998764 567899999999999999999987 89999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHH
Q psy5911 881 LIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKP 960 (1242)
Q Consensus 881 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~ 960 (1242)
+.++|..+++.++..+++++.+|+.+||++|+.||....+.+.++++..+.++..++.+.|||++|+++|.|+++++..+
T Consensus 235 l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~~ 314 (668)
T PRK13410 235 LAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISLPFITATEDGPKHIETRLDRKQFESLCGDLLDRLLRP 314 (668)
T ss_pred HHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999999999988766666678899999999999999999999999
Q ss_pred HHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeeccccee
Q psy5911 961 CEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTL 1040 (1242)
Q Consensus 961 i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~ 1040 (1242)
|+++|+++++++.+|+.|+||||+||||+|+++|+++||.++...+||++|||+|||++|+++++..+++.+.|++|++|
T Consensus 315 i~~~L~~ag~~~~dId~VvLVGGssRiP~V~~~l~~~fg~~~~~~~npdeaVA~GAAi~aa~ls~~~~~~~l~Dv~p~sl 394 (668)
T PRK13410 315 VKRALKDAGLSPEDIDEVVLVGGSTRMPMVQQLVRTLIPREPNQNVNPDEVVAVGAAIQAGILAGELKDLLLLDVTPLSL 394 (668)
T ss_pred HHHHHHHcCCChhhCcEEEEECCccccHHHHHHHHHHcCCCcccCCCCchHHHHhHHHHHHhhcccccceeEEeeccccc
Confidence 99999999999999999999999999999999999999998999999999999999999999999889999999999999
Q ss_pred eEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEc
Q psy5911 1041 GIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLD 1120 (1242)
Q Consensus 1041 gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d 1120 (1242)
|+++.+|.+.++||+|++||++++.+|++..|||+.+.|++|||++..+.+|..||+|.|.++||.|.|.++|+|+|++|
T Consensus 395 gie~~~g~~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~f~id 474 (668)
T PRK13410 395 GLETIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVAFDID 474 (668)
T ss_pred cceecCCeeEEEEeCCCcccccccccceeccCCCcEEEEEEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhh----ccC
Q psy5911 1121 ANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKD----ENT 1196 (1242)
Q Consensus 1121 ~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~----~~~ 1196 (1242)
.||+|+|++.+..||++.+++|....+|+++|++++++++.++.++|+..+++.+++|++|+|+|.++++|.+ +..
T Consensus 475 ~nGiL~V~a~d~~tg~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn~~e~~i~~~~~~l~~~~~~~~~ 554 (668)
T PRK13410 475 ANGILQVSATDRTTGREQSVTIQGASTLSEQEVNRMIQEAEAKADEDRRRRERIEKRNRALTLIAQAERRLRDAALEFGP 554 (668)
T ss_pred CCcEEEEEEEEcCCCceeeeeecccccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 9999999999999999999999877789999999999999999999999999999999999999999999953 568
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy5911 1197 KITDEEKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENII 1240 (1242)
Q Consensus 1197 ~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~ 1240 (1242)
++++++|+++...++++++||+.++.+.+++++++|.+.+.++.
T Consensus 555 ~~~~~~~~~~~~~l~~~~~wL~~~~~~~~~~~~~~~~~~l~~~~ 598 (668)
T PRK13410 555 YFAERQRRAVESAMRDVQDSLEQDDDRELDLAVADLQEALYGLN 598 (668)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999888777777777777666654
No 7
>KOG0102|consensus
Probab=100.00 E-value=1.6e-98 Score=817.91 Aligned_cols=573 Identities=61% Similarity=0.915 Sum_probs=544.8
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChH
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 82 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 82 (1242)
..|+|||+||||||+|++.++.+.++.|.+|.|.+||+|+|+.++.+++|..|+.+...||.|+++.-||+||++|.|+.
T Consensus 27 ~~vigidlgttnS~va~meg~~~kiienaegqrtTpsvva~~kdge~Lvg~~akrqav~n~~ntffatKrligRrf~d~e 106 (640)
T KOG0102|consen 27 GKVIGIDLGTTNSCVAVMEGKKPKIIENAEGQRTTPSVVAFTKDGERLVGMPAKRQAVTNPENTFFATKRLIGRRFDDPE 106 (640)
T ss_pred CceeeEeeeccceeEEEEeCCCceEeecccccccCCceEEEeccccEEecchhhhhhccCCCceEEEehhhhhhhccCHH
Confidence 35999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 83 VQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 162 (1242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~A 162 (1242)
++.+.+..||+++...++..+++..|+.++|.++.+++|.+++++|+.+++..+..+|+||||||++.||+++++|.++|
T Consensus 107 vq~~~k~vpyKiVk~~ngdaw~e~~G~~~spsqig~~vl~kmk~tae~yl~~~v~~avvtvpAyfndsqRqaTkdag~ia 186 (640)
T KOG0102|consen 107 VQKDIKQVPYKIVKASNGDAWVEARGKQYSPSQIGAFVLMKMKETAEAYLGKKVKNAVITVPAYFNDSQRQATKDAGQIA 186 (640)
T ss_pred HHHHHHhCCcceEEccCCcEEEEeCCeEecHHHHHHHHHHHHHHHHHHHcCchhhheeeccHHHHhHHHHHHhHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHH
Q psy5911 163 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 242 (1242)
Q Consensus 163 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~ 242 (1242)
|+++++++|||+|||++|+++.+. +..++|||+||||||++++.+.+ +.|++.++.||.++||+|||..+++|+.
T Consensus 187 gl~vlrvineptaaalaygld~k~-~g~iaV~dLgggtfdisilei~~----gvfevksTngdtflggedfd~~~~~~~v 261 (640)
T KOG0102|consen 187 GLNVLRVINEPTAAALAYGLDKKE-DGVIAVFDLGGGTFDISILEIED----GVFEVKSTNGDTHLGGEDFDNALVRFIV 261 (640)
T ss_pred cceeeccCCccchhHHhhcccccC-CCceEEEEcCCceeeeeeehhcc----ceeEEEeccCccccChhHHHHHHHHHHH
Confidence 999999999999999999999886 88999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 243 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 322 (1242)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 322 (1242)
.+|++..++|+..+..+++||++++|++|+.||+...+.+.+|++..+..|+..+++++||.+||+++.+++++.+++++
T Consensus 262 ~~fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~p~~ 341 (640)
T KOG0102|consen 262 SEFKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIEPCK 341 (640)
T ss_pred HhhhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeEE
Q psy5911 323 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 402 (1242)
Q Consensus 323 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sigi 402 (1242)
++|++|++...+|+.|+||||.+|+|.+++.+++.||.......||+++||.|||++++.+++.+++.++.||+|+++||
T Consensus 342 ~aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~fgk~p~~~vnPdeava~GAaiqggvl~geVkdvlLLdVtpLsLgi 421 (640)
T KOG0102|consen 342 KALRDASLSSSDINEVILVGGMTRMPKVQSTVKELFGKGPSKGVNPDEAVAGGAAIQGGVLSGEVKDVLLLDVTPLSLGI 421 (640)
T ss_pred HHHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHhCCCCCCCcCCcchhccchhhccchhhccccceeeeecchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecCC
Q psy5911 403 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 482 (1242)
Q Consensus 403 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~ 482 (1242)
++.+|.|..|||||++||+++++.|+++.|+|+.+.|.++||++.+..+|.++|+|.+.++||.|+|.|+|+|+|++|.|
T Consensus 422 etlggvft~Li~rnttIptkksqvfstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVtfDIdan 501 (640)
T KOG0102|consen 422 ETLGGVFTKLIPRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVTFDIDAN 501 (640)
T ss_pred HhhhhhheecccCCcccCchhhhheeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCceeEEEeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHHHHHHhhhHHHhhccchhh
Q psy5911 483 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIILEEKFCSFVLETKKETDYD 562 (1242)
Q Consensus 483 g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~ 562 (1242)
|+++|+|.|+.+||.++++|..+++|++++++.|+.+++.+...|...++..+..+.++.. +-+.++..++.
T Consensus 502 GI~~vsA~dk~t~K~qsi~i~~sggLs~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~--------~~~te~~~~~~ 573 (640)
T KOG0102|consen 502 GIGTVSAKDKGTGKSQSITIASSGGLSKDEIELMVGEAERLASTDKEKREAIETKNKADSI--------IYDTEKSLKEF 573 (640)
T ss_pred ceeeeehhhcccCCccceEEeecCCCCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhhe--------ecCchhhhhhh
Confidence 9999999999999999999999999999999999999999999999999988888887433 33444444444
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhh
Q psy5911 563 EDKIRKLKEIVIENIIIELIPITDSM 588 (1242)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~ll~v~d~~ 588 (1242)
.........+.++..+.+|-..+.++
T Consensus 574 ~~~~~~~~~~~i~~~i~~l~~~~~~~ 599 (640)
T KOG0102|consen 574 EEKIPAEECEKLEEKISDLRELVANK 599 (640)
T ss_pred hhhCcHHHHHHHHHHHHHHHHHHhhh
Confidence 44444555555556566665555544
No 8
>KOG0102|consensus
Probab=100.00 E-value=1.8e-98 Score=817.40 Aligned_cols=591 Identities=62% Similarity=0.913 Sum_probs=574.8
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|+|+||+|+|++++..+++.++.|..|.|.+||+|+|..++++++|..|+.+...||.|+++.-||+|||++.|+.++
T Consensus 29 vigidlgttnS~va~meg~~~kiienaegqrtTpsvva~~kdge~Lvg~~akrqav~n~~ntffatKrligRrf~d~evq 108 (640)
T KOG0102|consen 29 VIGIDLGTTNSCVAVMEGKKPKIIENAEGQRTTPSVVAFTKDGERLVGMPAKRQAVTNPENTFFATKRLIGRRFDDPEVQ 108 (640)
T ss_pred eeeEeeeccceeEEEEeCCCceEeecccccccCCceEEEeccccEEecchhhhhhccCCCceEEEehhhhhhhccCHHHH
Confidence 57999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred hhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGL 804 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl 804 (1242)
++++..||+++..++|..+++..|+.++|.++.+++|.+++++|+.+++.++..+|+||||||++.||+++++|.++||+
T Consensus 109 ~~~k~vpyKiVk~~ngdaw~e~~G~~~spsqig~~vl~kmk~tae~yl~~~v~~avvtvpAyfndsqRqaTkdag~iagl 188 (640)
T KOG0102|consen 109 KDIKQVPYKIVKASNGDAWVEARGKQYSPSQIGAFVLMKMKETAEAYLGKKVKNAVITVPAYFNDSQRQATKDAGQIAGL 188 (640)
T ss_pred HHHHhCCcceEEccCCcEEEEeCCeEecHHHHHHHHHHHHHHHHHHHcCchhhheeeccHHHHhHHHHHHhHhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHH
Q psy5911 805 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 884 (1242)
Q Consensus 805 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 884 (1242)
++++++|||+|||++|+++... ++.++|||+||||||++++.+.+ +.+++.++.||.++||+|||..+++|+..+
T Consensus 189 ~vlrvineptaaalaygld~k~-~g~iaV~dLgggtfdisilei~~----gvfevksTngdtflggedfd~~~~~~~v~~ 263 (640)
T KOG0102|consen 189 NVLRVINEPTAAALAYGLDKKE-DGVIAVFDLGGGTFDISILEIED----GVFEVKSTNGDTHLGGEDFDNALVRFIVSE 263 (640)
T ss_pred eeeccCCccchhHHhhcccccC-CCceEEEEcCCceeeeeeehhcc----ceeEEEeccCccccChhHHHHHHHHHHHHh
Confidence 9999999999999999999875 88999999999999999999998 999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q psy5911 885 FKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVA 964 (1242)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~ 964 (1242)
|++..++++..+..+++||++++|++|+.||....+.+.+|++..+..|+.++++++||.+||+++.+++++.++++.++
T Consensus 264 fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~p~~~a 343 (640)
T KOG0102|consen 264 FKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIEPCKKA 343 (640)
T ss_pred hhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeEEE
Q psy5911 965 LNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGIET 1044 (1242)
Q Consensus 965 l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi~~ 1044 (1242)
|++|++..++|+.|+||||.+|+|.+++.+++.||..+....||+++||.|||++++.+++.++++.+.||+|+++||++
T Consensus 344 L~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~fgk~p~~~vnPdeava~GAaiqggvl~geVkdvlLLdVtpLsLgiet 423 (640)
T KOG0102|consen 344 LRDASLSSSDINEVILVGGMTRMPKVQSTVKELFGKGPSKGVNPDEAVAGGAAIQGGVLSGEVKDVLLLDVTPLSLGIET 423 (640)
T ss_pred HHhccCChhhhhhhhhhcchhhcHHHHHHHHHHhCCCCCCCcCCcchhccchhhccchhhccccceeeeecchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCCee
Q psy5911 1045 MGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDANGI 1124 (1242)
Q Consensus 1045 ~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~g~ 1124 (1242)
.+|.|..+||||+.||+++++.|.+..|+|+.+.|.++|||+.+..+|..+|+|.+.|+||.|+|.|+|+|+|.+|.||+
T Consensus 424 lggvft~Li~rnttIptkksqvfstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVtfDIdanGI 503 (640)
T KOG0102|consen 424 LGGVFTKLIPRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVTFDIDANGI 503 (640)
T ss_pred hhhhheecccCCcccCchhhhheeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCceeEEEeecCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHHHH
Q psy5911 1125 LNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEEKE 1204 (1242)
Q Consensus 1125 l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~~~ 1204 (1242)
++|+|.++.|||.+++++..+.+|++.|++.|+++++++...|+..++..+..|..+++++.....+..+...++.++.+
T Consensus 504 ~~vsA~dk~t~K~qsi~i~~sggLs~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~~~~~~~~~~~~~ 583 (640)
T KOG0102|consen 504 GTVSAKDKGTGKSQSITIASSGGLSKDEIELMVGEAERLASTDKEKREAIETKNKADSIIYDTEKSLKEFEEKIPAEECE 583 (640)
T ss_pred eeeehhhcccCCccceEEeecCCCCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhheecCchhhhhhhhhhCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHh
Q psy5911 1205 SIEKSISNLELLIKG---DDIELIKKGNEDLLKISENII 1240 (1242)
Q Consensus 1205 ~~~~~~~~~~~wl~~---~~~~~~~~~~~~l~~~~~~~~ 1240 (1242)
+|...+.++.+.+.. .+.+.++.+...|+...-+++
T Consensus 584 ~i~~~i~~l~~~~~~~~~~~~~~~k~~~~~l~q~~lkl~ 622 (640)
T KOG0102|consen 584 KLEEKISDLRELVANKDSGDMEEIKKAMSALQQASLKLF 622 (640)
T ss_pred HHHHHHHHHHHHHhhhccCChhhHHHHHHHHHHhhhHHH
Confidence 999999999998874 356777777777777666665
No 9
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=6.4e-95 Score=880.62 Aligned_cols=543 Identities=57% Similarity=0.905 Sum_probs=513.1
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChH
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 82 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 82 (1242)
+.+||||||||||+||++++|.+++++|..|.+.+||+|+|.++ .+++|..|+.+...+|.++++++||+||+++.++.
T Consensus 27 ~~viGIDLGTTnS~vA~~~~~~~~ii~n~~g~r~tPS~V~f~~~-~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~~~d~~ 105 (657)
T PTZ00186 27 GDVIGVDLGTTYSCVATMDGDKARVLENSEGFRTTPSVVAFKGS-EKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEH 105 (657)
T ss_pred ceEEEEEeCcCeEEEEEEeCCceEEeecCCCCcccceEEEECCC-CEEEcHHHHHhhhhCchhHHHHHHHHhccccccHH
Confidence 46999999999999999999999999999999999999999865 67999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEecCCCCeEEEE-cCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 83 VQTVLKMVPYKIVAADNGDAWVEV-KDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
++...+.+||.++...++...+.. +++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++||++
T Consensus 106 v~~~~~~~p~~vv~~~~~~~~i~~~~~~~~speeisa~iL~~Lk~~Ae~~lg~~v~~aVITVPayF~~~qR~at~~Aa~~ 185 (657)
T PTZ00186 106 IQKDIKNVPYKIVRAGNGDAWVQDGNGKQYSPSQIGAFVLEKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTI 185 (657)
T ss_pred HHHhhccCcEEEEEcCCCceEEEeCCCeEEcHHHHHHHHHHHHHHHHHHHhCCccceEEEEECCCCChHHHHHHHHHHHH
Confidence 999999999999988888887775 4678999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
|||+++++++||+|||++|+.... .++++|||||||||||+|++++.+ +.++++++.|+.+|||+|||.+|++|+
T Consensus 186 AGl~v~rlInEPtAAAlayg~~~~-~~~~vlV~DlGGGT~DvSil~~~~----g~~~V~at~Gd~~LGG~DfD~~l~~~~ 260 (657)
T PTZ00186 186 AGLNVIRVVNEPTAAALAYGMDKT-KDSLIAVYDLGGGTFDISVLEIAG----GVFEVKATNGDTHLGGEDFDLALSDYI 260 (657)
T ss_pred cCCCeEEEEcChHHHHHHHhccCC-CCCEEEEEECCCCeEEEEEEEEeC----CEEEEEEecCCCCCCchhHHHHHHHHH
Confidence 999999999999999999998654 568999999999999999999987 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
.++|+.+++.|+..+++++.+|+.+||++|+.||....+.+.++.+..+.++..++.+.|||++|+++++|+++++..++
T Consensus 261 ~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v 340 (657)
T PTZ00186 261 LEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPC 340 (657)
T ss_pred HHHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHH
Confidence 99999999989988999999999999999999999999999998876655555678999999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeE
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 401 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sig 401 (1242)
+++|+++++++.+|+.|+||||+||||.|+++|+++||.++....||++|||+|||++|+.+++..+++.+.|++|++||
T Consensus 341 ~~~L~~a~~~~~dId~VvLVGGssriP~V~~~l~~~fg~~~~~~~nPdeaVA~GAAi~a~~l~~~~~~~~l~Dv~p~slg 420 (657)
T PTZ00186 341 KQCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFFQKDPFRGVNPDEAVALGAATLGGVLRGDVKGLVLLDVTPLSLG 420 (657)
T ss_pred HHHHHHcCCChhhCCEEEEECCcccChHHHHHHHHHhCCCccccCCCchHHHHhHHHHHHHhccccCceEEEeecccccc
Confidence 99999999999999999999999999999999999999888899999999999999999999998889999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
|++.+|.+.+|||||++||+++++.|++..|||+.+.|+||||++..+.+|..||+|+|.++||.|+|.++|+|+|++|.
T Consensus 421 ie~~~g~~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf~iD~ 500 (657)
T PTZ00186 421 IETLGGVFTRMIPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTFDIDA 500 (657)
T ss_pred ceecCCEEEEEEeCCCEeeEEEeeccccccCCCceEEEEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHHHHHHhhhH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIILEEKFCSFV 552 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~~~~~~~~~ 552 (1242)
||+|+|+|.++.||++.+++|..+.+|+++++++|.+++++++.+|...++..+++++++..+ ....+.+
T Consensus 501 nGiL~V~a~d~~tg~~~~~~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~ 570 (657)
T PTZ00186 501 NGICHVTAKDKATGKTQNITITANGGLSKEQIEQMIRDSEQHAEADRVKRELVEVRNNAETQL-TTAERQL 570 (657)
T ss_pred CCEEEEEEEEccCCcEEEEEeccCccCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH-HHHHHHh
Confidence 999999999999999999999988889999999999999999999999999999999886665 3333333
No 10
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=8.4e-95 Score=888.98 Aligned_cols=592 Identities=53% Similarity=0.810 Sum_probs=561.4
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
..++|||+||++++++++++|.+.+++|..|++.+||+|+|.+++++++|..|+.+...+|.++++++|||||+++.+
T Consensus 39 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d-- 116 (673)
T PLN03184 39 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE-- 116 (673)
T ss_pred CCEEEEEeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcCCCCEEECHHHHHhhhhCchhhhHHHHHhhCCCcch--
Confidence 347899999999999999999999999999999999999998777899999999999999999999999999999876
Q ss_pred HHhhcccCceEEEEcCCCCeEEEE--cCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEV--KDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
++...+.+||.++..+++.+.+.+ .+..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++||+
T Consensus 117 ~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 196 (673)
T PLN03184 117 VDEESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDAGR 196 (673)
T ss_pred hhhhhhcCCeEEEecCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 456778899999988888887775 467899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINH 880 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~ 880 (1242)
+|||+++++++||+|||++|+.... .++++||||+||||||+|++++.+ +.++++++.|+.+|||++||..|++|
T Consensus 197 ~AGl~v~~li~EPtAAAlayg~~~~-~~~~vlV~DlGgGT~DvSi~~~~~----~~~eVla~~gd~~LGG~dfD~~L~~~ 271 (673)
T PLN03184 197 IAGLEVLRIINEPTAASLAYGFEKK-SNETILVFDLGGGTFDVSVLEVGD----GVFEVLSTSGDTHLGGDDFDKRIVDW 271 (673)
T ss_pred HCCCCeEEEeCcHHHHHHHhhcccC-CCCEEEEEECCCCeEEEEEEEecC----CEEEEEEecCCCccCHHHHHHHHHHH
Confidence 9999999999999999999998764 567899999999999999999976 89999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHH
Q psy5911 881 LIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKP 960 (1242)
Q Consensus 881 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~ 960 (1242)
+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++++..+.++..++++.|||++|++++.|+++++..+
T Consensus 272 ~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~~~ 351 (673)
T PLN03184 272 LASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISLPFITATADGPKHIDTTLTRAKFEELCSDLLDRCKTP 351 (673)
T ss_pred HHHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEEEeeeccCCCCceEEEEECHHHHHHHHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999999998877655555567899999999999999999999999
Q ss_pred HHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeeccccee
Q psy5911 961 CEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTL 1040 (1242)
Q Consensus 961 i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~ 1040 (1242)
|+++|+++++.+.+|+.|+||||+||||.|+++|+++||.++...+||++|||+|||++|+++++..+++.+.|++|++|
T Consensus 352 i~~~L~~a~~~~~dId~ViLvGGssriP~V~~~i~~~fg~~~~~~~npdeaVA~GAAi~aa~ls~~~~~~~~~dv~p~sl 431 (673)
T PLN03184 352 VENALRDAKLSFKDIDEVILVGGSTRIPAVQELVKKLTGKDPNVTVNPDEVVALGAAVQAGVLAGEVSDIVLLDVTPLSL 431 (673)
T ss_pred HHHHHHHcCCChhHccEEEEECCccccHHHHHHHHHHhCCCcccccCcchHHHHHHHHHHHHhccCccceEEEecccccc
Confidence 99999999999999999999999999999999999999988889999999999999999999999888999999999999
Q ss_pred eEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEc
Q psy5911 1041 GIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLD 1120 (1242)
Q Consensus 1041 gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d 1120 (1242)
|+++.++.+.++||+|++||+++++.|++..|+|+.+.|.+|||++....+|..||+|.|+++|+.|.|.++|+|+|++|
T Consensus 432 gi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id 511 (673)
T PLN03184 432 GLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDID 511 (673)
T ss_pred eEEecCCeeEEEEeCCCccceecceEeeeecCCCcEEEEEEEeecccccccCceEEEEEEeCCCCCCCCCceEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCH
Q psy5911 1121 ANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITD 1200 (1242)
Q Consensus 1121 ~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~ 1200 (1242)
.||+|+|++.+..++++.+++|....+|++++++++++++.++.++|+..+++.+++|+||+|+|.+++.|+++..++++
T Consensus 512 ~~GiL~V~a~~~~t~~~~~~~i~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN~lE~~iy~~r~~l~e~~~~~~~ 591 (673)
T PLN03184 512 ANGILSVSATDKGTGKKQDITITGASTLPKDEVERMVQEAEKFAKEDKEKRDAVDTKNQADSVVYQTEKQLKELGDKVPA 591 (673)
T ss_pred CCCeEEEEEEecCCCeEEEEEecccccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhCCH
Confidence 99999999999999999999998777899999999999999999999999999999999999999999999767789999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1201 EEKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1201 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
++++++.+.++++++||++++.+.+++++++|.+.+.++..
T Consensus 592 eer~~l~~~l~~~e~wL~~~d~~~ik~~~~~l~~~l~~l~~ 632 (673)
T PLN03184 592 DVKEKVEAKLKELKDAIASGSTQKMKDAMAALNQEVMQIGQ 632 (673)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888764
No 11
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.5e-94 Score=890.71 Aligned_cols=592 Identities=66% Similarity=0.986 Sum_probs=566.4
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
.+++|||+||++++++++++|.+++++|..|++.+||+|+|.+++++++|..|+.+...+|.++++++|||||+. ++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~--~~~ 79 (627)
T PRK00290 2 GKIIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTKDGERLVGQPAKRQAVTNPENTIFSIKRLMGRR--DEE 79 (627)
T ss_pred CcEEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeCCCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC--chH
Confidence 347899999999999999999999999999999999999998667899999999999999999999999999998 667
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
++...+.+||.++..+++...+.+++..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++||++|
T Consensus 80 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa~~A 159 (627)
T PRK00290 80 VQKDIKLVPYKIVKADNGDAWVEIDGKKYTPQEISAMILQKLKKDAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGKIA 159 (627)
T ss_pred HHHHhhcCCeEEEEcCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHc
Confidence 88888999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
||+++++++||+|||++|+.... .++++||||+||||||+|++++.+ +.++++++.|+.++||++||.+|++|+.
T Consensus 160 Gl~v~~li~EptAAAl~y~~~~~-~~~~vlV~D~GggT~dvsv~~~~~----~~~~vla~~gd~~lGG~d~D~~l~~~~~ 234 (627)
T PRK00290 160 GLEVLRIINEPTAAALAYGLDKK-GDEKILVYDLGGGTFDVSILEIGD----GVFEVLSTNGDTHLGGDDFDQRIIDYLA 234 (627)
T ss_pred CCceEEEecchHHHHHHhhhccC-CCCEEEEEECCCCeEEEEEEEEeC----CeEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 99999999999999999998764 568899999999999999999987 8999999999999999999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
++|+.+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+.+|+.++.+.|||++|+++|+|+++++..+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~ 314 (627)
T PRK00290 235 DEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEINLPFITADASGPKHLEIKLTRAKFEELTEDLVERTIEPCK 314 (627)
T ss_pred HHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889999999999999999999999999999988776545567789999999999999999999999999
Q ss_pred HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeE
Q psy5911 963 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi 1042 (1242)
++|+++++++.+|+.|+||||+||+|+|++.|++.||.++..++||++|||+|||++|+.+++..+++.+.|++|++||+
T Consensus 315 ~~l~~a~~~~~~id~ViLvGGssriP~v~~~l~~~fg~~~~~~~npdeava~GAa~~aa~l~~~~~~~~~~d~~~~slgi 394 (627)
T PRK00290 315 QALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFFGKEPNKGVNPDEVVAIGAAIQGGVLAGDVKDVLLLDVTPLSLGI 394 (627)
T ss_pred HHHHHcCCChhhCcEEEEECCcCCChHHHHHHHHHhCCCCCcCcCChHHHHHhHHHHHHHhcCCccceeeeeccceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.++.+.+|||+|+++|++++++|++..|+|+.+.|.+|+|++..+.+|..||+|.|+++|+.|+|.++|+|+|++|.|
T Consensus 395 ~~~~~~~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~ 474 (627)
T PRK00290 395 ETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDAN 474 (627)
T ss_pred EecCCeEEEEecCCCcCCccceEEEEecCCCcceEEEEEEEecccccCcCceEEEEEECCCCCCCCCCceEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+|+|++.+..+|+..+++|....++++++++++++++.++.++|+..+++.+++|+||+|+|.++++|+++..++++++
T Consensus 475 gil~v~a~~~~~~~~~~~~i~~~~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~le~~i~~~~~~l~~~~~~~~~~e 554 (627)
T PRK00290 475 GIVHVSAKDKGTGKEQSITITASSGLSDEEIERMVKDAEANAEEDKKRKELVEARNQADSLIYQTEKTLKELGDKVPADE 554 (627)
T ss_pred ceEEEEEEEccCCceeEEEeccccccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 99999999999999999999887789999999999999999999999999999999999999999999976778999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1203 KESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
++++.+.++++++||+.++.+.+++++++|++.+.+++.
T Consensus 555 ~~~i~~~l~~~~~wL~~~~~~~i~~k~~~L~~~~~~~~~ 593 (627)
T PRK00290 555 KEKIEAAIKELKEALKGEDKEAIKAKTEELTQASQKLGE 593 (627)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998999999999999999999875
No 12
>KOG0101|consensus
Probab=100.00 E-value=2.2e-96 Score=842.76 Aligned_cols=591 Identities=49% Similarity=0.769 Sum_probs=565.1
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
..++|+|+||+++|++++++|+++++.|+.|++.+||+|+|.++ ++++|.+|..+...+|.++++++||++|+.++|+.
T Consensus 7 ~~aiGIdlGtT~s~v~v~~~~~v~iian~~g~rttPs~vaf~~~-e~~vg~~a~~qv~~np~ntv~~~krliGr~f~d~~ 85 (620)
T KOG0101|consen 7 SVAIGIDLGTTYSCVGVYQSGKVEIIANDQGNRTTPSVVAFTDT-ERLIGDAAKNQVARNPDNTVFDAKRLIGRFFDDPE 85 (620)
T ss_pred cceeeEeccCccceeeeEcCCcceeeeccccCccccceeeeccc-ccchhhhhhhhhhcCCcceeeehhhhcCccccchh
Confidence 45789999999999999999999999999999999999999976 78999999999999999999999999999999999
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEc----CeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHH
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVK----DQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA 798 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~A 798 (1242)
++..+++|||.+....++.+.+.+. .+.++|+++++++|.++++.++.++|.++.++|+|||+||++.||+++.+|
T Consensus 86 v~~~~k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~A 165 (620)
T KOG0101|consen 86 VQSDMKLWPFKVISDQGGKPKIQVTYKGETKSFNPEEISSMVLTKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKDA 165 (620)
T ss_pred hHhHhhcCCcccccccCCcceEEecccccceeeeeeeeeehhccccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHHH
Confidence 9999999999999777767777764 258999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHHccCCCC-CCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHH
Q psy5911 799 GKIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 877 (1242)
Q Consensus 799 a~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l 877 (1242)
+.+|||+++++++||+|||++|++.+. ....++||+|+||||||+|++.+.. +.+.+.++.|+.++||++||+.|
T Consensus 166 ~~iaGl~vlrii~EPtAaalAygl~k~~~~~~~VlI~DlGggtfdvs~l~i~g----G~~~vkat~gd~~lGGedf~~~l 241 (620)
T KOG0101|consen 166 ALIAGLNVLRIINEPTAAALAYGLDKKVLGERNVLIFDLGGGTFDVSVLSLEG----GIFEVKATAGDTHLGGEDFDNKL 241 (620)
T ss_pred HHhcCCceeeeecchHHHHHHhhccccccceeeEEEEEcCCCceeeeeEEecc----chhhhhhhcccccccchhhhHHH
Confidence 999999999999999999999998765 4567899999999999999999987 78899999999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHH
Q psy5911 878 INHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKS 957 (1242)
Q Consensus 878 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~ 957 (1242)
++|+..+|+.+++.++..++++.++|+.+||.+|+.||+...+.+.++++..+.+ +...+||.+|+.++.+++.++
T Consensus 242 ~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~~~i~vdsL~~g~d----~~~~itrarfe~l~~dlf~~~ 317 (620)
T KOG0101|consen 242 VNHFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSITRARFEELNADLFRST 317 (620)
T ss_pred HHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhcccccceeccchhhcccc----ccceeehhhhhhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999887654 888999999999999999999
Q ss_pred HHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-cccccccCCcchhhhhhHHHhhhhhccc----ccceEE
Q psy5911 958 LKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLSGV----VKDVLL 1032 (1242)
Q Consensus 958 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~~~~~p~~aVa~GAa~~a~~l~~~----~~~~~~ 1032 (1242)
+.++.++|+++++++.+|+.|+||||++|+|.+++.++++| ++.+..++||||+||+|||++||.+++. ..++.+
T Consensus 318 ~~~v~~~L~da~~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~l 397 (620)
T KOG0101|consen 318 LEPVEKALKDAKLDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLL 397 (620)
T ss_pred HHHHHHHHHhhccCccCCceeEEecCcccchHHHHHHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCccccccceee
Confidence 99999999999999999999999999999999999999999 6788899999999999999999999983 478999
Q ss_pred eecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCE
Q psy5911 1033 LDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQ 1112 (1242)
Q Consensus 1033 ~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~ 1112 (1242)
.|+.|+++||++.++.|.++|++|+++|++++++|++..|||+.+.|.||+||+.++++|..+|.|.|.+|||.|+|.++
T Consensus 398 id~~pl~~gve~a~~~~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp~ 477 (620)
T KOG0101|consen 398 IDVAPLSLGVETAGGVFTVLIPRNTSIPTKKTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 477 (620)
T ss_pred eecccccccccccCCcceeeeecccccceeeeeeeeeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCeeEEEEEEecCCCceEEEEEccCC-CCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhh
Q psy5911 1113 IEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSG-GLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNL 1191 (1242)
Q Consensus 1113 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~-~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l 1191 (1242)
|+++|.+|.||+|+|++.++.|||..+++|.+.. .||+++|++|..++++++.+|...+++.+++|.||+|+|+++..+
T Consensus 478 IevtfdiD~ngiL~Vta~d~stgK~~~i~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~ 557 (620)
T KOG0101|consen 478 IEVTFDIDANGILNVTAVDKSTGKENKITITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATV 557 (620)
T ss_pred eeEEEecCCCcEEEEeeccccCCccceEEEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhh
Confidence 9999999999999999999999999999999886 599999999999999999999999999999999999999999999
Q ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1192 KDENTKITDEEKESIEKSISNLELLIKGD---DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1192 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
++....++++++.++.+.++++.+||+.+ ..++|++|.++|+..|.|+|++
T Consensus 558 ~~~~~~i~~~~~~~~~~~~~~~i~wl~~~~~~~~~e~e~k~~el~~~~~p~~~~ 611 (620)
T KOG0101|consen 558 EDEKGKINEEDKQKILDKCNEVINWLDKNQLAEKEEFEHKQKELELVCNPIISK 611 (620)
T ss_pred hhhccccChhhhhhHHHHHHHHHHHhhhcccccccHHHHHHHHHHhhccHHHHh
Confidence 87668999999999999999999999987 5789999999999999999974
No 13
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=2.2e-93 Score=879.05 Aligned_cols=590 Identities=61% Similarity=0.931 Sum_probs=562.9
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|||+||++++++++.+|.+.++.|..|++.+||+|+|.+++++++|..|+.+...+|.++++++||+||+.+. .++
T Consensus 2 viGIDlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~~~--~~~ 79 (595)
T TIGR02350 2 IIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTKNGERLVGQPAKRQAVTNPENTIYSIKRFMGRRFD--EVT 79 (595)
T ss_pred EEEEEeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhhhhCchhhhHHHHHHhCCCch--HHH
Confidence 579999999999999999999999999999999999999977789999999999999999999999999999983 466
Q ss_pred hhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGL 804 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl 804 (1242)
...+.+||. +..+++.+.+.+++..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++||++|||
T Consensus 80 ~~~~~~~~~-v~~~~~~~~~~v~~~~~~peel~a~~L~~l~~~a~~~~~~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl 158 (595)
T TIGR02350 80 EEAKRVPYK-VVGDGGDVRVKVDGKEYTPQEISAMILQKLKKDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGL 158 (595)
T ss_pred HHhhcCCee-EEcCCCceEEEECCEEecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 778899999 6677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHH
Q psy5911 805 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 884 (1242)
Q Consensus 805 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 884 (1242)
+++++++||+|||++|+......++++||||+||||||+|++++.+ +.++++++.|+.++||++||..|++|+.++
T Consensus 159 ~v~~li~EptAAAl~y~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~----~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~ 234 (595)
T TIGR02350 159 EVLRIINEPTAAALAYGLDKSKKDEKILVFDLGGGTFDVSILEIGD----GVFEVLSTAGDTHLGGDDFDQRIIDWLADE 234 (595)
T ss_pred ceEEEecchHHHHHHHhhcccCCCcEEEEEECCCCeEEEEEEEecC----CeEEEEEecCCcccCchhHHHHHHHHHHHH
Confidence 9999999999999999987645678999999999999999999986 899999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q psy5911 885 FKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVA 964 (1242)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~ 964 (1242)
|+.+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+.+|+.++.+.|||++|+++++|+++++.++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~~~ 314 (595)
T TIGR02350 235 FKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFEELTADLVERTKEPVRQA 314 (595)
T ss_pred HHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888999999999999999999999999999998877665556778999999999999999999999999999
Q ss_pred HHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeEEE
Q psy5911 965 LNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGIET 1044 (1242)
Q Consensus 965 l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi~~ 1044 (1242)
|+++++++.+|+.|+||||+||+|+|++.|++.||.++..++||++|||.|||++|+.+++..+++.+.|++|++||+++
T Consensus 315 l~~a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~~~~~~~~~pdeava~GAa~~aa~l~~~~~~~~~~d~~~~~igi~~ 394 (595)
T TIGR02350 315 LKDAGLSASDIDEVILVGGSTRIPAVQELVKDFFGKEPNKSVNPDEVVAIGAAIQGGVLKGDVKDVLLLDVTPLSLGIET 394 (595)
T ss_pred HHHcCCCHhHCcEEEEECCcccChHHHHHHHHHhCCcccCCcCcHHHHHHHHHHHHHHhcCCcccceeeecccceeEEEe
Confidence 99999999999999999999999999999999999889999999999999999999999998899999999999999999
Q ss_pred eCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCCee
Q psy5911 1045 MGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDANGI 1124 (1242)
Q Consensus 1045 ~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~g~ 1124 (1242)
.++.+.++||+|++||++++++|++..|+|+.+.|.+|+|++..+.+|..||++.++++|+.+.|.++|+|+|++|.||+
T Consensus 395 ~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~G~ 474 (595)
T TIGR02350 395 LGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFDIDANGI 474 (595)
T ss_pred cCCceEEEEeCCCcCCccceEeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECCCCCCCCCCceEEEEEEEcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHHHH
Q psy5911 1125 LNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEEKE 1204 (1242)
Q Consensus 1125 l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~~~ 1204 (1242)
|+|++.+..+|++.++++....++++++++++++++.++.++|+..+++.+++|+||+|+|.+++.|+++..++++++++
T Consensus 475 l~v~~~~~~~~~~~~~~i~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lEs~iy~~r~~l~~~~~~~~~~e~~ 554 (595)
T TIGR02350 475 LHVSAKDKGTGKEQSITITASSGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNADSLAYQAEKTLKEAGDKLPAEEKE 554 (595)
T ss_pred EEEEEEEccCCceEEEEeccccccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 99999999999999999988778999999999999999999999999999999999999999999997667889999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1205 SIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1205 ~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
++...++++++||+.++..++++++++|++.+++++.
T Consensus 555 ~l~~~l~~~~~wL~~~d~~~i~~~~~~l~~~~~~~~~ 591 (595)
T TIGR02350 555 KIEKAVAELKEALKGEDVEEIKAKTEELQQALQKLAE 591 (595)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999874
No 14
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=3e-93 Score=875.30 Aligned_cols=591 Identities=58% Similarity=0.871 Sum_probs=560.2
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
.++|||+||++++++++++|.+.+++|..|.+.+||+|+|.+++++++|..|+.+...+|.++++++||+||+.+.+ +
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~~--~ 80 (621)
T CHL00094 3 KVVGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTKKGDLLVGQIAKRQAVINPENTFYSVKRFIGRKFSE--I 80 (621)
T ss_pred ceEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcCCCCEEECHHHHHhHHhCccceehhhHHhcCCChHH--H
Confidence 47899999999999999999999999999999999999998777899999999999999999999999999999865 5
Q ss_pred HhhcccCceEEEEcCCCCeEEEE--cCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEV--KDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 801 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~ 801 (1242)
+...+.|||.++..+++.+.+.+ .+..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++||++
T Consensus 81 ~~~~~~~~~~v~~~~~g~i~~~~~~~~~~~s~eei~a~iL~~l~~~ae~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~ 160 (621)
T CHL00094 81 SEEAKQVSYKVKTDSNGNIKIECPALNKDFSPEEISAQVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKI 160 (621)
T ss_pred HhhhhcCCeEEEECCCCCEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 56667899999988888887765 4678999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHH
Q psy5911 802 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 881 (1242)
Q Consensus 802 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l 881 (1242)
|||+++++++||+|||++|+.... .+..+||||+||||||+|++++.. +.++++++.|+.++||++||..|++|+
T Consensus 161 AGl~v~~li~EptAAAlay~~~~~-~~~~vlV~DlGgGT~DvSv~~~~~----~~~~vla~~gd~~lGG~d~D~~l~~~~ 235 (621)
T CHL00094 161 AGLEVLRIINEPTAASLAYGLDKK-NNETILVFDLGGGTFDVSILEVGD----GVFEVLSTSGDTHLGGDDFDKKIVNWL 235 (621)
T ss_pred cCCceEEEeccHHHHHHHhccccC-CCCEEEEEEcCCCeEEEEEEEEcC----CEEEEEEEecCCCcChHHHHHHHHHHH
Confidence 999999999999999999998754 457899999999999999999976 889999999999999999999999999
Q ss_pred HHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 882 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 961 (1242)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i 961 (1242)
.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++++..+.+++.++...|||++|++++.|+++++..+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i 315 (621)
T CHL00094 236 IKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQTGPKHIEKTLTRAKFEELCSDLINRCRIPV 315 (621)
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888999999999999999999999999999998776554455678899999999999999999999999
Q ss_pred HHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceee
Q psy5911 962 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 1041 (1242)
Q Consensus 962 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~g 1041 (1242)
+++|+++++.+.+|+.|+||||+||+|.|++.|+++||.++...+||++|||+|||++|+++++..+++.+.|++|++||
T Consensus 316 ~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg~~~~~~~~pdeava~GAA~~aa~ls~~~~~~~~~d~~~~~lg 395 (621)
T CHL00094 316 ENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKKLLGKKPNQSVNPDEVVAIGAAVQAGVLAGEVKDILLLDVTPLSLG 395 (621)
T ss_pred HHHHHHcCCChhhCcEEEEECCccCChHHHHHHHHHhCCCcCcCCCchhHHHhhhHHHHHHhcCCccceeeeeeeceeee
Confidence 99999999999999999999999999999999999999989999999999999999999999998889999999999999
Q ss_pred EEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcC
Q psy5911 1042 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 1121 (1242)
Q Consensus 1042 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~ 1121 (1242)
++..++.+.+|||+|++||+++++.|++..++|+.+.|.+|||++..+.+|..||+|.+.++|+.+.|.++|+|+|++|.
T Consensus 396 i~~~~~~~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~f~id~ 475 (621)
T CHL00094 396 VETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDA 475 (621)
T ss_pred eeccCCEEEEEEeCCCccceeeeEEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHH
Q psy5911 1122 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDE 1201 (1242)
Q Consensus 1122 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~ 1201 (1242)
||+|+|++.+..||++.++.|....+|++++++++++++.++.++|+..+++.+++|.||+|+|.++++|+.+..+++++
T Consensus 476 ~Gil~v~~~~~~t~~~~~~~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~le~~i~~~~~~l~~~~~~~~~~ 555 (621)
T CHL00094 476 NGILSVTAKDKGTGKEQSITIQGASTLPKDEVERMVKEAEKNAAEDKEKREKIDLKNQAESLCYQAEKQLKELKDKISEE 555 (621)
T ss_pred CCeEEEEEeeccCCceeeeeeccchhccHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhHHHHHHHHHHHHHHhccCCHH
Confidence 99999999999999999999987778999999999999999999999999999999999999999999997677889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1202 EKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1202 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
+|+++...++++++||+.++.+.+++++++|++.+.+++.
T Consensus 556 ~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 595 (621)
T CHL00094 556 KKEKIENLIKKLRQALQNDNYESIKSLLEELQKALMEIGK 595 (621)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999875
No 15
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.5e-92 Score=864.84 Aligned_cols=536 Identities=54% Similarity=0.899 Sum_probs=509.6
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|++|||||||||||+||++++|.+.+|.|..|.+.+||+|+|.+++++++|..|+.+...+|.++++++||+||+++.+
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~~~~- 79 (668)
T PRK13410 1 MGRIVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKDGELLVGQLARRQLVLNPQNTFYNLKRFIGRRYDE- 79 (668)
T ss_pred CCcEEEEEeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeCCCCEEECHHHHHhhHhCccceehHHhhhhCCCchh-
Confidence 6789999999999999999999999999999999999999998777899999999999999999999999999999865
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEE--cCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEV--KDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 159 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa 159 (1242)
++...+.+||.+...+++.+.+.+ .++.++|+++++++|++|++.++.+++.++.++|||||+||++.||++|++||
T Consensus 80 -~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 158 (668)
T PRK13410 80 -LDPESKRVPYTIRRNEQGNVRIKCPRLEREFAPEELSAMILRKLADDASRYLGEPVTGAVITVPAYFNDSQRQATRDAG 158 (668)
T ss_pred -hHHhhccCCeEEEECCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 455667899999988888888776 35789999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHH
Q psy5911 160 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 239 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~ 239 (1242)
++|||+++++|+||+|||++|+.... .+.++||||+||||||+|++++.+ +.++++++.|+.+|||++||.+|++
T Consensus 159 ~~AGl~v~~li~EPtAAAlayg~~~~-~~~~vlV~DlGgGT~Dvsv~~~~~----g~~~V~at~gd~~lGG~dfD~~l~~ 233 (668)
T PRK13410 159 RIAGLEVERILNEPTAAALAYGLDRS-SSQTVLVFDLGGGTFDVSLLEVGN----GVFEVKATSGDTQLGGNDFDKRIVD 233 (668)
T ss_pred HHcCCCeEEEecchHHHHHHhccccC-CCCEEEEEECCCCeEEEEEEEEcC----CeEEEEEeecCCCCChhHHHHHHHH
Confidence 99999999999999999999998764 578899999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHH
Q psy5911 240 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLK 319 (1242)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~ 319 (1242)
|+..+|..+++.++..+++++.+|+.+||++|+.||....+.+.++++..+.+++.++...|||++|+++|.|+++++..
T Consensus 234 ~l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~ 313 (668)
T PRK13410 234 WLAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISLPFITATEDGPKHIETRLDRKQFESLCGDLLDRLLR 313 (668)
T ss_pred HHHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999999999988876655667889999999999999999999999
Q ss_pred HHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccce
Q psy5911 320 PCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLT 399 (1242)
Q Consensus 320 ~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~s 399 (1242)
+|+++|+++++.+.+|+.|+||||+||||+|+++|+++||.++...+||++|||+|||++|+++++..+++.+.|++|++
T Consensus 314 ~i~~~L~~ag~~~~dId~VvLVGGssRiP~V~~~l~~~fg~~~~~~~npdeaVA~GAAi~aa~ls~~~~~~~l~Dv~p~s 393 (668)
T PRK13410 314 PVKRALKDAGLSPEDIDEVVLVGGSTRMPMVQQLVRTLIPREPNQNVNPDEVVAVGAAIQAGILAGELKDLLLLDVTPLS 393 (668)
T ss_pred HHHHHHHHcCCChhhCcEEEEECCccccHHHHHHHHHHcCCCcccCCCCchHHHHhHHHHHHhhcccccceeEEeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred eEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEe
Q psy5911 400 LGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDL 479 (1242)
Q Consensus 400 igi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~ 479 (1242)
||+++.+|.+.+|||+|++||++++.+|++..|||+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|++
T Consensus 394 lgie~~~g~~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~f~i 473 (668)
T PRK13410 394 LGLETIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVAFDI 473 (668)
T ss_pred ccceecCCeeEEEEeCCCcccccccccceeccCCCcEEEEEEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 480 DANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 480 d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|.||+|+|++.+..||++..++|....+|++++++++.++++++.++|...+++.+++|+++.++
T Consensus 474 d~nGiL~V~a~d~~tg~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn~~e~~i 538 (668)
T PRK13410 474 DANGILQVSATDRTTGREQSVTIQGASTLSEQEVNRMIQEAEAKADEDRRRRERIEKRNRALTLI 538 (668)
T ss_pred CCCcEEEEEEEEcCCCceeeeeecccccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999877889999999999999999999999999999999997765
No 16
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=1.6e-92 Score=870.84 Aligned_cols=590 Identities=48% Similarity=0.776 Sum_probs=553.8
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
+++|||+||+|++++++++|++++++|..|++.+||+|+|.++ .+++|..|+.+...+|.++++++||+||+.++++.+
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~-~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~ 83 (653)
T PTZ00009 5 PAIGIDLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDSVV 83 (653)
T ss_pred cEEEEEeCcccEEEEEEeCCceEEEECCCCCccCCcEEEECCC-CEEEcHHHHHhhhhCcccEEhhhHHHhCCCCCchhH
Confidence 4689999999999999999999999999999999999999865 689999999999999999999999999999999999
Q ss_pred HhhcccCceEEEEcCCCCeEEEEc--C--eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVK--D--QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 799 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa 799 (1242)
+...+.|||.++..+++...+.+. + ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa 163 (653)
T PTZ00009 84 QSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVLQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKDAG 163 (653)
T ss_pred hhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHHHHHHHHHHHHhCCCcceeEEEeCCCCCHHHHHHHHHHH
Confidence 999999999999888887766653 3 689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHccCCCC-CCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRII 878 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~ 878 (1242)
++|||+++++++||+|||++|+.... ..++++||||+||||||+|++++.. +.++++++.|+.+|||++||.+|+
T Consensus 164 ~~AGl~v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~v~a~~gd~~lGG~d~D~~l~ 239 (653)
T PTZ00009 164 TIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIED----GIFEVKATAGDTHLGGEDFDNRLV 239 (653)
T ss_pred HHcCCceeEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEEEeC----CeEEEEEecCCCCCChHHHHHHHH
Confidence 99999999999999999999998654 2467899999999999999999987 889999999999999999999999
Q ss_pred HHHHHHhhhhc-CCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHH
Q psy5911 879 NHLIYEFKIEN-GVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKS 957 (1242)
Q Consensus 879 ~~l~~~~~~~~-~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~ 957 (1242)
+|+.++|+.++ +.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .+++++|||++|+++|+|+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~i~i~~~~~~----~d~~~~itR~~fe~l~~~l~~~~ 315 (653)
T PTZ00009 240 EFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEG----IDYNVTISRARFEELCGDYFRNT 315 (653)
T ss_pred HHHHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEEEEEEeccCC----ceEEEEECHHHHHHHHHHHHHHH
Confidence 99999998876 46777889999999999999999999999999999876654 45899999999999999999999
Q ss_pred HHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc-ccccccCCcchhhhhhHHHhhhhhccc----ccceEE
Q psy5911 958 LKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSGV----VKDVLL 1032 (1242)
Q Consensus 958 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~v~~~~~p~~aVa~GAa~~a~~l~~~----~~~~~~ 1032 (1242)
..+|+++|+++++++.+|+.|+||||+||||.|+++|+++|+ .++...+||++|||+|||++|+++++. .+++.+
T Consensus 316 ~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ls~~~~~~~~~~~~ 395 (653)
T PTZ00009 316 LQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLL 395 (653)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCCCCCcchHHhhhhhhhHHHhcCCccccccceEE
Confidence 999999999999999999999999999999999999999996 578889999999999999999999873 568899
Q ss_pred eecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCE
Q psy5911 1033 LDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQ 1112 (1242)
Q Consensus 1033 ~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~ 1112 (1242)
.|++|++||++..++.+.++||+|++||++++++|++..|+|+.+.|.+|||++....+|..||+|.+.++|+.++|.++
T Consensus 396 ~dv~p~slgi~~~~~~~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~ 475 (653)
T PTZ00009 396 LDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQ 475 (653)
T ss_pred EeecccccCccccCCceEEEEeCCCcCCccceeEeEeecCCCceEEEEEEecccccCCCCceEEEEEEcCCCCCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred EEEEEEEcCCeeEEEEEEecCCCceEEEEEccC-CCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhh
Q psy5911 1113 IEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNL 1191 (1242)
Q Consensus 1113 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l 1191 (1242)
|+|+|++|.||+|+|++.+..+|+..++.|... ..+++++++++++++.++..+|+..+++.+++|+||+|+|.+|++|
T Consensus 476 i~v~f~id~~Gil~v~~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eakN~lEs~Iy~~r~~L 555 (653)
T PTZ00009 476 IEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTL 555 (653)
T ss_pred EEEEEEECCCCeEEEEEecccCCceeeEEEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999999999999999988754 4699999999999999999999999999999999999999999999
Q ss_pred hh--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1192 KD--ENTKITDEEKESIEKSISNLELLIKGD---DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1192 ~~--~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
++ +..++++++++++...++++++||+++ +.++|++++++|++.++|++.|
T Consensus 556 ~~~~~~~~~t~ee~~~l~~~l~~~~~wL~~~~~~~~~~~~~kl~eL~~~~~pi~~r 611 (653)
T PTZ00009 556 QDEKVKGKLSDSDKATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTK 611 (653)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 63 778999999999999999999999976 5789999999999999999864
No 17
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=5.4e-92 Score=857.65 Aligned_cols=579 Identities=42% Similarity=0.675 Sum_probs=545.1
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|||+||+||+++++++|++++++|..|++.+||+|+|.+++.+++|..|+.+...+|.++++++|||||+.+.+...
T Consensus 1 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~~~d~~~- 79 (599)
T TIGR01991 1 AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKDGGVEVGKEALAAAAEDPKNTISSVKRLMGRSIEDIKT- 79 (599)
T ss_pred CEEEEEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEecHHHHHhhhhChhhhHHHHHHHhCCCccchhh-
Confidence 3689999999999999999999999999999999999998777899999999999999999999999999999877432
Q ss_pred hhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGL 804 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl 804 (1242)
.+.+||.++..+++.+.+.+.+..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++||++|||
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~p~ei~a~iL~~lk~~a~~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl 157 (599)
T TIGR01991 80 --FSILPYRFVDGPGEMVRLRTVQGTVTPVEVSAEILKKLKQRAEESLGGDLVGAVITVPAYFDDAQRQATKDAARLAGL 157 (599)
T ss_pred --cccCCEEEEEcCCCceEEEeCCCEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677899999888888998888788999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHH
Q psy5911 805 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 884 (1242)
Q Consensus 805 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 884 (1242)
+++++++||+|||++|+.... .++++||||+||||||+|++++.+ +.++++++.|+.+|||++||..|++|+.++
T Consensus 158 ~v~~li~EPtAAAlay~~~~~-~~~~vlV~DlGgGT~DvSi~~~~~----~~~~vla~~gd~~lGG~d~D~~l~~~l~~~ 232 (599)
T TIGR01991 158 NVLRLLNEPTAAAVAYGLDKA-SEGIYAVYDLGGGTFDVSILKLTK----GVFEVLATGGDSALGGDDFDHALAKWILKQ 232 (599)
T ss_pred CceEEecCHHHHHHHHhhccC-CCCEEEEEEcCCCeEEEEEEEEcC----CeEEEEEEcCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999998765 567899999999999999999987 889999999999999999999999999976
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q psy5911 885 FKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVA 964 (1242)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~ 964 (1242)
++ .+...++..+.+|+.+||++|+.||....+.+.++. .+.++.++|||++|+++++|+++++.++++++
T Consensus 233 ~~----~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~------~g~~~~~~itr~efe~l~~~ll~~i~~~i~~~ 302 (599)
T TIGR01991 233 LG----ISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTL------DGKDFKGKLTRDEFEALIQPLVQKTLSICRRA 302 (599)
T ss_pred hC----CCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEE------CCcEEEEEEeHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 444568889999999999999999999988888764 13568999999999999999999999999999
Q ss_pred HHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhccc--ccceEEeecccceeeE
Q psy5911 965 LNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV--VKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 965 l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~--~~~~~~~~~~~~~~gi 1042 (1242)
|+++++.+.+|+.|+||||+||||+|+++|++.|+.++..++||++|||+|||++|+.+++. .+++.+.|++|++||+
T Consensus 303 L~~a~~~~~~id~ViLvGGssriP~V~~~l~~~f~~~~~~~~npdeaVA~GAai~a~~l~~~~~~~~~~l~dv~p~slgi 382 (599)
T TIGR01991 303 LRDAGLSVEEIKGVVLVGGSTRMPLVRRAVAELFGQEPLTDIDPDQVVALGAAIQADLLAGNRIGNDLLLLDVTPLSLGI 382 (599)
T ss_pred HHHcCCChhhCCEEEEECCcCCChHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHHHhccccccCceEEEEeeeeeeEE
Confidence 99999999999999999999999999999999999888889999999999999999999874 3578999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.+|.+.++||||++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.|.|.++|+|+|++|.|
T Consensus 383 ~~~~g~~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 462 (599)
T TIGR01991 383 ETMGGLVEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDAD 462 (599)
T ss_pred EecCCEEEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+|+|++.++.||++.++.|..+.++++++++++.+++.++..+|+..++..+++|++|+|++.+++.+.++...+++++
T Consensus 463 gil~V~a~~~~t~~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (599)
T TIGR01991 463 GLLTVSAQEQSTGVEQSIQVKPSYGLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILEALQAALAADGDLLSEDE 542 (599)
T ss_pred CeEEEEEEECCCCcEEEEecccccCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHH
Confidence 99999999999999999999887789999999999999999999999999999999999999999999976667899999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1203 KESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
|+++...++++++||++++.+.++++.++|++.+.+++.
T Consensus 543 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 581 (599)
T TIGR01991 543 RAAIDAAMEALQKALQGDDADAIKAAIEALEEATDNFAA 581 (599)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988764
No 18
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=9.2e-92 Score=862.48 Aligned_cols=537 Identities=58% Similarity=0.909 Sum_probs=510.7
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+.+||||||||||+||++.+|.+.+|+|..|++.+||+|+|.+++++++|..|+.+...+|.++++++|||||+++.++
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~ 80 (653)
T PRK13411 1 MGKVIGIDLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAENTVYSIKRFIGRRWDDT 80 (653)
T ss_pred CCcEEEEEeCcccEEEEEEECCEEEEEECCCCCccCceEEEEeCCCCEEEcHHHHHhhhhCcccchHHHHHHhCCCccch
Confidence 57899999999999999999999999999999999999999987778999999999999999999999999999999886
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
. ...+.+||.++...++.+.+.+.+..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++||++
T Consensus 81 ~--~~~~~~~~~~v~~~~~~~~~~i~~~~~~peei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~ 158 (653)
T PRK13411 81 E--EERSRVPYTCVKGRDDTVNVQIRGRNYTPQEISAMILQKLKQDAEAYLGEPVTQAVITVPAYFTDAQRQATKDAGTI 158 (653)
T ss_pred h--HHhhcCCceEEecCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCcHHHHHHHHHHHH
Confidence 4 34678999999888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
|||+++++++||+|||++|+......+.++|||||||||||+|++++.+ +.++++++.|+.+|||++||..|++|+
T Consensus 159 AGl~v~~li~EPtAAAl~y~~~~~~~~~~vlV~DlGgGT~dvsi~~~~~----~~~~V~at~gd~~LGG~dfD~~l~~~l 234 (653)
T PRK13411 159 AGLEVLRIINEPTAAALAYGLDKQDQEQLILVFDLGGGTFDVSILQLGD----GVFEVKATAGNNHLGGDDFDNCIVDWL 234 (653)
T ss_pred cCCCeEEEecchHHHHHHhcccccCCCCEEEEEEcCCCeEEEEEEEEeC----CEEEEEEEecCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999987665678899999999999999999987 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++++..+..++.++.+.|||++|+++++|+++++..+|
T Consensus 235 ~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i 314 (653)
T PRK13411 235 VENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEELTKDLVEATIEPM 314 (653)
T ss_pred HHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence 99999988889989999999999999999999999999999998876554455788999999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc-cccccCCCcchhhHhHHHHhhhhhcCCccceEEEeecccee
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTL 400 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~si 400 (1242)
+++|+++++.+.+|+.|+||||+||+|+|+++|+++|+ .++..+.||++|||+|||++|+.+++..+++.+.|++|++|
T Consensus 315 ~~~L~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~~~~~~~~~dv~p~sl 394 (653)
T PRK13411 315 QQALKDAGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGGEVKDLLLLDVTPLSL 394 (653)
T ss_pred HHHHHHcCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcCCccceeeeeccccee
Confidence 99999999999999999999999999999999999996 67888999999999999999999998888999999999999
Q ss_pred EEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEec
Q psy5911 401 GIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLD 480 (1242)
Q Consensus 401 gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d 480 (1242)
|+++.++.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|
T Consensus 395 gi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 474 (653)
T PRK13411 395 GIETLGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVSFEID 474 (653)
T ss_pred eEEecCCceEEEEECCCcccceeeEEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 481 ANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 481 ~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
.||+|+|++.+..+|++..+.+....+|++++++++.++++++.++|+..+++.+++|++++++
T Consensus 475 ~~Gil~v~a~d~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~i 538 (653)
T PRK13411 475 VNGILKVSAQDQGTGREQSIRITNTGGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQADSLL 538 (653)
T ss_pred CCCeEEEEEeeccCCceEeeEEeccccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999877889999999999999999999999999999999997765
No 19
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=1.8e-91 Score=859.65 Aligned_cols=537 Identities=64% Similarity=0.988 Sum_probs=514.3
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChH
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 82 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 82 (1242)
+.+||||||||||+||++++|.+++++|..|++.+||+|+|.+++++++|..|+.+..++|.++++++||+||+++.++.
T Consensus 41 ~~viGIDlGTt~s~va~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~ 120 (663)
T PTZ00400 41 GDIVGIDLGTTNSCVAIMEGSQPKVIENSEGMRTTPSVVAFTEDGQRLVGIVAKRQAVTNPENTVFATKRLIGRRYDEDA 120 (663)
T ss_pred CcEEEEEECcccEEEEEEeCCeeEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhHHhCCcceehhhhhhcCCCcCcHH
Confidence 46999999999999999999999999999999999999999877789999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 83 VQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 162 (1242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~A 162 (1242)
++...+.+||.++..+++.+.+.++++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||++|++||++|
T Consensus 121 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~A 200 (663)
T PTZ00400 121 TKKEQKILPYKIVRASNGDAWIEAQGKKYSPSQIGAFVLEKMKETAESYLGRKVKQAVITVPAYFNDSQRQATKDAGKIA 200 (663)
T ss_pred HHhhhccCCeEEEecCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHH
Q psy5911 163 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 242 (1242)
Q Consensus 163 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~ 242 (1242)
||+++++++||+|||++|+.... .++++|||||||||||+|++++.+ +.++++++.|+.+|||++||..|++|+.
T Consensus 201 Gl~v~~li~EptAAAlay~~~~~-~~~~vlV~DlGgGT~DvSv~~~~~----g~~~v~a~~gd~~LGG~d~D~~l~~~l~ 275 (663)
T PTZ00400 201 GLDVLRIINEPTAAALAFGMDKN-DGKTIAVYDLGGGTFDISILEILG----GVFEVKATNGNTSLGGEDFDQRILNYLI 275 (663)
T ss_pred CCceEEEeCchHHHHHHhccccC-CCcEEEEEeCCCCeEEEEEEEecC----CeeEEEecccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999998654 578999999999999999999976 8899999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 243 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 322 (1242)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 322 (1242)
.+|+.+++.++..+++++.+|+.+||++|+.||.+.++.+.++.+..+..++.++.++|||++|+++++|+++++.++++
T Consensus 276 ~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i~ 355 (663)
T PTZ00400 276 AEFKKQQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINLPFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPCE 355 (663)
T ss_pred HHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEEEeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888899999999999999999999999989999887776655667899999999999999999999999999
Q ss_pred HHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeEE
Q psy5911 323 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 402 (1242)
Q Consensus 323 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sigi 402 (1242)
++|+++++.+.+|+.|+||||+||+|+|+++|+++||.++....||+++||+|||++|+.+++..+++.+.|++|++||+
T Consensus 356 ~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f~~~~~~~~npdeaVA~GAAi~aa~l~~~~~~~~~~dv~p~slgi 435 (663)
T PTZ00400 356 KCIKDAGVKKDELNDVILVGGMTRMPKVSETVKKIFGKEPSKGVNPDEAVAMGAAIQAGVLKGEIKDLLLLDVTPLSLGI 435 (663)
T ss_pred HHHHHcCCCHHHCcEEEEECCccCChHHHHHHHHHhCCCcccCCCCccceeeccHHHHHhhcCCccceEEEeccccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred EeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecCC
Q psy5911 403 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 482 (1242)
Q Consensus 403 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~ 482 (1242)
++.+|.+.+|||+|++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.+.|.++|+|+|++|.|
T Consensus 436 ~~~~g~~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~ 515 (663)
T PTZ00400 436 ETLGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDVDAN 515 (663)
T ss_pred EecCCeeEEEEecCccCCccceeeeeeccCCCceEEEEEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 483 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 483 g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|+|+|++.+..+|++..+.|....+|++++++++.+++++++++|+..+++.+++|+++.++
T Consensus 516 Gil~v~a~~~~~~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~i 577 (663)
T PTZ00400 516 GIMNISAVDKSTGKKQEITIQSSGGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKNEAETLI 577 (663)
T ss_pred CCEEEEEEeccCCcEEEEEeeccccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877889999999999999999999999999999999997764
No 20
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=6.7e-91 Score=849.26 Aligned_cols=575 Identities=41% Similarity=0.682 Sum_probs=539.9
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|||+||++|+++++++|++++++|..|++.+||+|+|.++ .++||..|+.+...+|.++++++|||||+.+.+ ++
T Consensus 21 ~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~-~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d--~~ 97 (616)
T PRK05183 21 AVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLED-GIEVGYEARANAAQDPKNTISSVKRFMGRSLAD--IQ 97 (616)
T ss_pred EEEEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEcCC-CEEEcHHHHHhhHhCchhhHHHHHHHhCCCchh--hh
Confidence 689999999999999999999999999999999999999876 489999999999999999999999999999876 34
Q ss_pred hhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGL 804 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl 804 (1242)
...+.+||.+...++|.+.+.+.+..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++||++|||
T Consensus 98 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl 177 (616)
T PRK05183 98 QRYPHLPYQFVASENGMPLIRTAQGLKSPVEVSAEILKALRQRAEETLGGELDGAVITVPAYFDDAQRQATKDAARLAGL 177 (616)
T ss_pred hhhhcCCeEEEecCCCceEEEecCCeEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 45677899998888888888887778999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHH
Q psy5911 805 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 884 (1242)
Q Consensus 805 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 884 (1242)
+++++++||+|||++|+.... .+++++|||+||||||+|++++.. +.++++++.|+.+|||++||..|++|+.++
T Consensus 178 ~v~~li~EPtAAAlay~~~~~-~~~~vlV~DlGGGT~DvSv~~~~~----~~~evlat~gd~~lGG~d~D~~l~~~~~~~ 252 (616)
T PRK05183 178 NVLRLLNEPTAAAIAYGLDSG-QEGVIAVYDLGGGTFDISILRLSK----GVFEVLATGGDSALGGDDFDHLLADWILEQ 252 (616)
T ss_pred CeEEEecchHHHHHHhhcccC-CCCEEEEEECCCCeEEEEEEEeeC----CEEEEEEecCCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999998764 467899999999999999999987 889999999999999999999999999988
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q psy5911 885 FKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVA 964 (1242)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~ 964 (1242)
|+. +...+++.+.+|+.+||++|+.||....+.+.++. +...|||++|++++.|+++++..+++++
T Consensus 253 ~~~----~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~----------~~~~itr~efe~l~~~l~~~~~~~i~~~ 318 (616)
T PRK05183 253 AGL----SPRLDPEDQRLLLDAARAAKEALSDADSVEVSVAL----------WQGEITREQFNALIAPLVKRTLLACRRA 318 (616)
T ss_pred cCC----CcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEec----------CCCeEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 753 33467889999999999999999999888887742 1124999999999999999999999999
Q ss_pred HHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhccc--ccceEEeecccceeeE
Q psy5911 965 LNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV--VKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 965 l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~--~~~~~~~~~~~~~~gi 1042 (1242)
|+++++.+.+|+.|+||||+||||.|++.|+++||.++..+.||++|||+|||++|+.+++. .+++.+.|++|++||+
T Consensus 319 L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg~~~~~~~npdeaVA~GAAi~a~~l~~~~~~~~~~l~dv~p~slgi 398 (616)
T PRK05183 319 LRDAGVEADEVKEVVMVGGSTRVPLVREAVGEFFGRTPLTSIDPDKVVAIGAAIQADILAGNKPDSDMLLLDVIPLSLGL 398 (616)
T ss_pred HHHcCCCcccCCEEEEECCcccChHHHHHHHHHhccCcCcCCCchHHHHHHHHHHHHHhccccccCceEEEeeccccccc
Confidence 99999999999999999999999999999999999888889999999999999999999875 4589999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.+|.+.++||||++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.|+|.++|+|+|++|.|
T Consensus 399 ~~~~g~~~~ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~~ 478 (616)
T PRK05183 399 ETMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDAD 478 (616)
T ss_pred eecCCeEEEEEeCCCcccccccEEEEeccCCCeEEEEEEecccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+|+|++.++.+|++.++.|..+.++++++++++++++.++..+|+..+++.+++|++|.|++.+++.+++....+++++
T Consensus 479 Gil~V~a~~~~~~~~~~~~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 558 (616)
T PRK05183 479 GLLSVTAMEKSTGVEASIQVKPSYGLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVLEALQAALAADGDLLSAAE 558 (616)
T ss_pred CeEEEEEEEcCCCcEEEecccccccCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHH
Confidence 99999999999999999999877789999999999999999999999999999999999999999999976667899999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1203 KESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
|+++...++++++||.+++.+.+++++++|++.+.+++.
T Consensus 559 ~~~~~~~l~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~ 597 (616)
T PRK05183 559 RAAIDAAMAALREVAQGDDADAIEAAIKALDKATQEFAA 597 (616)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998864
No 21
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=4.5e-90 Score=847.12 Aligned_cols=537 Identities=56% Similarity=0.875 Sum_probs=508.6
Q ss_pred CCCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCC
Q psy5911 1 QYCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 80 (1242)
Q Consensus 1 q~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 80 (1242)
|++.|||||||||||+||++.+|.+.+++|..|++.+||+|+|.+++.+++|..|+.+...+|.++++++|||||+++.+
T Consensus 37 ~~~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d 116 (673)
T PLN03184 37 VAEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE 116 (673)
T ss_pred cCCCEEEEEeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcCCCCEEECHHHHHhhhhCchhhhHHHHHhhCCCcch
Confidence 57789999999999999999999999999999999999999998777899999999999999999999999999999876
Q ss_pred hHHHHHhccCCeEEEecCCCCeEEEE--cCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHH
Q psy5911 81 EIVQTVLKMVPYKIVAADNGDAWVEV--KDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA 158 (1242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~A 158 (1242)
++...+.+||.++..+++.+.+.+ .++.++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++|
T Consensus 117 --~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 194 (673)
T PLN03184 117 --VDEESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDA 194 (673)
T ss_pred --hhhhhhcCCeEEEecCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 456678899999988888887765 4688999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHH
Q psy5911 159 GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRII 238 (1242)
Q Consensus 159 a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~ 238 (1242)
|++|||+++++++||+|||++|+.... .+.++|||||||||||+|++++.+ +.++++++.|+.+|||++||+.|+
T Consensus 195 a~~AGl~v~~li~EPtAAAlayg~~~~-~~~~vlV~DlGgGT~DvSi~~~~~----~~~eVla~~gd~~LGG~dfD~~L~ 269 (673)
T PLN03184 195 GRIAGLEVLRIINEPTAASLAYGFEKK-SNETILVFDLGGGTFDVSVLEVGD----GVFEVLSTSGDTHLGGDDFDKRIV 269 (673)
T ss_pred HHHCCCCeEEEeCcHHHHHHHhhcccC-CCCEEEEEECCCCeEEEEEEEecC----CEEEEEEecCCCccCHHHHHHHHH
Confidence 999999999999999999999998764 567899999999999999999976 899999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHH
Q psy5911 239 NHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSL 318 (1242)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~ 318 (1242)
+|+..+|+.+++.++..+++++.+|+.+||++|+.||.+.++.+.++++....+++.++++.|||++|++++.|+++++.
T Consensus 270 ~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~ 349 (673)
T PLN03184 270 DWLASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISLPFITATADGPKHIDTTLTRAKFEELCSDLLDRCK 349 (673)
T ss_pred HHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEEEeeeccCCCCceEEEEECHHHHHHHHHHHHHHHH
Confidence 99999999999988889999999999999999999999999999888766544455678999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccc
Q psy5911 319 KPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPL 398 (1242)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~ 398 (1242)
.+|+++|+++++.+.+|+.|+||||+||||+|+++|+++||.++...+||+++||+|||++|+.+++..+++.+.|++|+
T Consensus 350 ~~i~~~L~~a~~~~~dId~ViLvGGssriP~V~~~i~~~fg~~~~~~~npdeaVA~GAAi~aa~ls~~~~~~~~~dv~p~ 429 (673)
T PLN03184 350 TPVENALRDAKLSFKDIDEVILVGGSTRIPAVQELVKKLTGKDPNVTVNPDEVVALGAAVQAGVLAGEVSDIVLLDVTPL 429 (673)
T ss_pred HHHHHHHHHcCCChhHccEEEEECCccccHHHHHHHHHHhCCCcccccCcchHHHHHHHHHHHHhccCccceEEEecccc
Confidence 99999999999999999999999999999999999999999988899999999999999999999998889999999999
Q ss_pred eeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEE
Q psy5911 399 TLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFD 478 (1242)
Q Consensus 399 sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~ 478 (1242)
+||+++.++.+.+|||+|++||++++++|++..|+|+.+.|.+|||++....+|..||+|.|+++|+.++|.++|+|+|+
T Consensus 430 slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~ 509 (673)
T PLN03184 430 SLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFD 509 (673)
T ss_pred cceEEecCCeeEEEEeCCCccceecceEeeeecCCCcEEEEEEEeecccccccCceEEEEEEeCCCCCCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 479 LDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 479 ~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
+|.||+|+|++.+..+|++..++|..+.+|++++++++.++.++++.+|+..+++.+++|++++++
T Consensus 510 id~~GiL~V~a~~~~t~~~~~~~i~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN~lE~~i 575 (673)
T PLN03184 510 IDANGILSVSATDKGTGKKQDITITGASTLPKDEVERMVQEAEKFAKEDKEKRDAVDTKNQADSVV 575 (673)
T ss_pred eCCCCeEEEEEEecCCCeEEEEEecccccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999877889999999999999999999999999999999997665
No 22
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=2.6e-89 Score=844.15 Aligned_cols=536 Identities=69% Similarity=1.045 Sum_probs=511.7
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+++||||||||||++|++++|.+++++|..|++.+||+|+|..++.+++|..|+.+..++|.++++++||+||++ ++
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~--~~ 78 (627)
T PRK00290 1 MGKIIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTKDGERLVGQPAKRQAVTNPENTIFSIKRLMGRR--DE 78 (627)
T ss_pred CCcEEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeCCCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC--ch
Confidence 6789999999999999999999999999999999999999998667899999999999999999999999999998 56
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
.++...+.+||.++...++...+.++++.++|+++++++|++|++.|+.+++.++.++|||||++|++.||++|++||++
T Consensus 79 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa~~ 158 (627)
T PRK00290 79 EVQKDIKLVPYKIVKADNGDAWVEIDGKKYTPQEISAMILQKLKKDAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGKI 158 (627)
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 78888899999999998888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
|||++++|++||+|||++|+.... .++++|||||||||||+|++++.+ +.++++++.|+.++||.+||.+|++|+
T Consensus 159 AGl~v~~li~EptAAAl~y~~~~~-~~~~vlV~D~GggT~dvsv~~~~~----~~~~vla~~gd~~lGG~d~D~~l~~~~ 233 (627)
T PRK00290 159 AGLEVLRIINEPTAAALAYGLDKK-GDEKILVYDLGGGTFDVSILEIGD----GVFEVLSTNGDTHLGGDDFDQRIIDYL 233 (627)
T ss_pred cCCceEEEecchHHHHHHhhhccC-CCCEEEEEECCCCeEEEEEEEEeC----CeEEEEEecCCCCcChHHHHHHHHHHH
Confidence 999999999999999999998764 578999999999999999999977 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
.++|+.+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+..|+.++.+.|||++|+++|+|+++++..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i 313 (627)
T PRK00290 234 ADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEINLPFITADASGPKHLEIKLTRAKFEELTEDLVERTIEPC 313 (627)
T ss_pred HHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHHHH
Confidence 99999999989988999999999999999999999999999998876654455788999999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeE
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 401 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sig 401 (1242)
+++|+.+++.+.+|+.|+||||+||+|+|++.|+++||.++..+.||++|||+|||++|+.+++..+++.+.|++|++||
T Consensus 314 ~~~l~~a~~~~~~id~ViLvGGssriP~v~~~l~~~fg~~~~~~~npdeava~GAa~~aa~l~~~~~~~~~~d~~~~slg 393 (627)
T PRK00290 314 KQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFFGKEPNKGVNPDEVVAIGAAIQGGVLAGDVKDVLLLDVTPLSLG 393 (627)
T ss_pred HHHHHHcCCChhhCcEEEEECCcCCChHHHHHHHHHhCCCCCcCcCChHHHHHhHHHHHHHhcCCccceeeeeccceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
+++.++.+.+|||+|+++|++++++|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.++|.++|+|+|++|.
T Consensus 394 i~~~~~~~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~ 473 (627)
T PRK00290 394 IETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDA 473 (627)
T ss_pred EEecCCeEEEEecCCCcCCccceEEEEecCCCcceEEEEEEEecccccCcCceEEEEEECCCCCCCCCCceEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
||+|+|++.+..+|+..+++|....+|++++++++.+++.++.++|+..++..+++|+++.++
T Consensus 474 ~gil~v~a~~~~~~~~~~~~i~~~~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~le~~i 536 (627)
T PRK00290 474 NGIVHVSAKDKGTGKEQSITITASSGLSDEEIERMVKDAEANAEEDKKRKELVEARNQADSLI 536 (627)
T ss_pred CceEEEEEEEccCCceeEEEeccccccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999887889999999999999999999999999999999997764
No 23
>KOG0101|consensus
Probab=100.00 E-value=3.6e-90 Score=791.58 Aligned_cols=573 Identities=51% Similarity=0.778 Sum_probs=531.5
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
++.++|||||||+||++++.+|.++++.|.+|++.+||+|+|.++ +.++|.+|..+...+|.++++++||++|+.++++
T Consensus 6 ~~~aiGIdlGtT~s~v~v~~~~~v~iian~~g~rttPs~vaf~~~-e~~vg~~a~~qv~~np~ntv~~~krliGr~f~d~ 84 (620)
T KOG0101|consen 6 ESVAIGIDLGTTYSCVGVYQSGKVEIIANDQGNRTTPSVVAFTDT-ERLIGDAAKNQVARNPDNTVFDAKRLIGRFFDDP 84 (620)
T ss_pred ccceeeEeccCccceeeeEcCCcceeeeccccCccccceeeeccc-ccchhhhhhhhhhcCCcceeeehhhhcCccccch
Confidence 457899999999999999999999999999999999999999975 7889999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEc----CeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVK----DKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
.++.+.++|||.+....++.+.+.+. .+.++|+++++++|.++++.++.+++..+.++|+|||+||++.||+++.+
T Consensus 85 ~v~~~~k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~ 164 (620)
T KOG0101|consen 85 EVQSDMKLWPFKVISDQGGKPKIQVTYKGETKSFNPEEISSMVLTKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKD 164 (620)
T ss_pred hhHhHhhcCCcccccccCCcceEEecccccceeeeeeeeeehhccccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHH
Confidence 99999999999999777767777764 36799999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCC-CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
|+.+|||+++++|+||+|||++|++.+. ....+|||||+||||||+|++.+.. +.+.+.++.|+.++||++||+.
T Consensus 165 A~~iaGl~vlrii~EPtAaalAygl~k~~~~~~~VlI~DlGggtfdvs~l~i~g----G~~~vkat~gd~~lGGedf~~~ 240 (620)
T KOG0101|consen 165 AALIAGLNVLRIINEPTAAALAYGLDKKVLGERNVLIFDLGGGTFDVSVLSLEG----GIFEVKATAGDTHLGGEDFDNK 240 (620)
T ss_pred HHHhcCCceeeeecchHHHHHHhhccccccceeeEEEEEcCCCceeeeeEEecc----chhhhhhhcccccccchhhhHH
Confidence 9999999999999999999999998765 4578899999999999999999987 7889999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHH
Q psy5911 237 IINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISK 316 (1242)
Q Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~ 316 (1242)
|++|+..+|+.+++.++..+.+++.+|+.+||.+|+.||+...+.+.++++.++ .++...|||.+|+.++.+++.+
T Consensus 241 l~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~~~i~vdsL~~g----~d~~~~itrarfe~l~~dlf~~ 316 (620)
T KOG0101|consen 241 LVNHFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRS 316 (620)
T ss_pred HHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhcccccceeccchhhcc----ccccceeehhhhhhhhhHHHHH
Confidence 999999999999999999999999999999999999999999999999998876 5688999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc-ccccccCCCcchhhHhHHHHhhhhhcC----CccceE
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLSG----VVKDVL 391 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~~~~~~~p~~ava~GAa~~a~~l~~----~~~~~~ 391 (1242)
+..++.++|+++++++.+|+.|+||||++|+|.+|..++++| ++.+..++||+++||+|||++||.+++ ...+++
T Consensus 317 ~~~~v~~~L~da~~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~ 396 (620)
T KOG0101|consen 317 TLEPVEKALKDAKLDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLL 396 (620)
T ss_pred HHHHHHHHHHhhccCccCCceeEEecCcccchHHHHHHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCcccccccee
Confidence 999999999999999999999999999999999999999999 677889999999999999999999998 347889
Q ss_pred EEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcC
Q psy5911 392 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 471 (1242)
Q Consensus 392 ~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 471 (1242)
+.|+.|+++||++.++.|.++|++||++|++++++|++..|||+.+.|.||+|++.+.++|.++|.|.|.++||+|+|++
T Consensus 397 lid~~pl~~gve~a~~~~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp 476 (620)
T KOG0101|consen 397 LIDVAPLSLGVETAGGVFTVLIPRNTSIPTKKTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVP 476 (620)
T ss_pred eeecccccccccccCCcceeeeecccccceeeeeeeeeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecC-CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy5911 472 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIILEEKFCS 550 (1242)
Q Consensus 472 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~~~~~~~ 550 (1242)
+|+++|.+|.||+|+|++.|+.|||...++|.+. ..|+.+++++|..+++..+.+|+..+++.+.++.++.+..+....
T Consensus 477 ~IevtfdiD~ngiL~Vta~d~stgK~~~i~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~ 556 (620)
T KOG0101|consen 477 QIEVTFDIDANGILNVTAVDKSTGKENKITITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKAT 556 (620)
T ss_pred ceeEEEecCCCcEEEEeeccccCCccceEEEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhh
Confidence 9999999999999999999999999999999877 569999999999999999999999999999999997765322221
Q ss_pred hHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhh
Q psy5911 551 FVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMF 591 (1242)
Q Consensus 551 ~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a 591 (1242)
. +..+ ..+.+..+.+++.-+.+.+.|+|.-..|
T Consensus 557 ~--~~~~------~~i~~~~~~~~~~~~~~~i~wl~~~~~~ 589 (620)
T KOG0101|consen 557 V--EDEK------GKINEEDKQKILDKCNEVINWLDKNQLA 589 (620)
T ss_pred h--hhhc------cccChhhhhhHHHHHHHHHHHhhhcccc
Confidence 1 2222 2445556666777788888888865544
No 24
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=5e-88 Score=829.06 Aligned_cols=536 Identities=60% Similarity=0.928 Sum_probs=506.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+++||||||||||++|++++|.+.+++|..|.+.+||+|+|.+++++++|..|+.+...+|.++++++||+||+++.+
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~~- 79 (621)
T CHL00094 1 MGKVVGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTKKGDLLVGQIAKRQAVINPENTFYSVKRFIGRKFSE- 79 (621)
T ss_pred CCceEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcCCCCEEECHHHHHhHHhCccceehhhHHhcCCChHH-
Confidence 5689999999999999999999999999999999999999998777899999999999999999999999999999865
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEE--cCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEV--KDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 159 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa 159 (1242)
++...+.+||.++...++.+.+.+ .+..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++||
T Consensus 80 -~~~~~~~~~~~v~~~~~g~i~~~~~~~~~~~s~eei~a~iL~~l~~~ae~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa 158 (621)
T CHL00094 80 -ISEEAKQVSYKVKTDSNGNIKIECPALNKDFSPEEISAQVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAG 158 (621)
T ss_pred -HHhhhhcCCeEEEECCCCCEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 455667899999988888877765 46789999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHH
Q psy5911 160 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 239 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~ 239 (1242)
+.|||+++++++||+|||++|+.... .+.++|||||||||||+|++++.+ +.++++++.|+.++||++||..|++
T Consensus 159 ~~AGl~v~~li~EptAAAlay~~~~~-~~~~vlV~DlGgGT~DvSv~~~~~----~~~~vla~~gd~~lGG~d~D~~l~~ 233 (621)
T CHL00094 159 KIAGLEVLRIINEPTAASLAYGLDKK-NNETILVFDLGGGTFDVSILEVGD----GVFEVLSTSGDTHLGGDDFDKKIVN 233 (621)
T ss_pred HHcCCceEEEeccHHHHHHHhccccC-CCCEEEEEEcCCCeEEEEEEEEcC----CEEEEEEEecCCCcChHHHHHHHHH
Confidence 99999999999999999999998654 567899999999999999999876 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHH
Q psy5911 240 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLK 319 (1242)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~ 319 (1242)
|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+..++.++...|||++|++++.|+++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~ 313 (621)
T CHL00094 234 WLIKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQTGPKHIEKTLTRAKFEELCSDLINRCRI 313 (621)
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHH
Confidence 99999999999998889999999999999999999999999999887765444556788999999999999999999999
Q ss_pred HHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccce
Q psy5911 320 PCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLT 399 (1242)
Q Consensus 320 ~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~s 399 (1242)
+|+++|+++++.+.+|+.|+||||+||+|.|+++|+++||.++....||+++||+|||++|+.+++..+++.+.|++|++
T Consensus 314 ~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg~~~~~~~~pdeava~GAA~~aa~ls~~~~~~~~~d~~~~~ 393 (621)
T CHL00094 314 PVENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKKLLGKKPNQSVNPDEVVAIGAAVQAGVLAGEVKDILLLDVTPLS 393 (621)
T ss_pred HHHHHHHHcCCChhhCcEEEEECCccCChHHHHHHHHHhCCCcCcCCCchhHHHhhhHHHHHHhcCCccceeeeeeecee
Confidence 99999999999999999999999999999999999999999899999999999999999999999988899999999999
Q ss_pred eEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEe
Q psy5911 400 LGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDL 479 (1242)
Q Consensus 400 igi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~ 479 (1242)
||++..++.+.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.++|.++|+|+|++
T Consensus 394 lgi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~f~i 473 (621)
T CHL00094 394 LGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDI 473 (621)
T ss_pred eeeeccCCEEEEEEeCCCccceeeeEEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 480 DANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 480 d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|.||+|+|++.+..+|++.++.|....+|++++++++.+++.++..+|+..+++.+++|++++++
T Consensus 474 d~~Gil~v~~~~~~t~~~~~~~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~le~~i 538 (621)
T CHL00094 474 DANGILSVTAKDKGTGKEQSITIQGASTLPKDEVERMVKEAEKNAAEDKEKREKIDLKNQAESLC 538 (621)
T ss_pred CCCCeEEEEEeeccCCceeeeeeccchhccHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhHHHH
Confidence 99999999999999999999999877789999999999999999999999999999999997764
No 25
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=6.2e-88 Score=830.71 Aligned_cols=534 Identities=65% Similarity=0.980 Sum_probs=507.6
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChHH
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 83 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 83 (1242)
.|||||||||||++|++++|.+.+++|..|++.+||+|+|.+++++++|..|+.+...+|.++++++||+||+++. .+
T Consensus 1 ~viGIDlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~~~--~~ 78 (595)
T TIGR02350 1 KIIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTKNGERLVGQPAKRQAVTNPENTIYSIKRFMGRRFD--EV 78 (595)
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhhhhCchhhhHHHHHHhCCCch--HH
Confidence 4899999999999999999999999999999999999999977789999999999999999999999999999983 46
Q ss_pred HHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q psy5911 84 QTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAG 163 (1242)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AG 163 (1242)
+...+.+||. +..+++.+.+.++++.++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++||+.||
T Consensus 79 ~~~~~~~~~~-v~~~~~~~~~~v~~~~~~peel~a~~L~~l~~~a~~~~~~~v~~~VItVPa~f~~~qR~a~~~Aa~~AG 157 (595)
T TIGR02350 79 TEEAKRVPYK-VVGDGGDVRVKVDGKEYTPQEISAMILQKLKKDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAG 157 (595)
T ss_pred HHHhhcCCee-EEcCCCceEEEECCEEecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 6777899999 667788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHH
Q psy5911 164 LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 243 (1242)
Q Consensus 164 l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~ 243 (1242)
|+++++++||+|||++|+......+.++|||||||||||+|++++.+ +.++++++.|+.++||.+||+.|++|+..
T Consensus 158 l~v~~li~EptAAAl~y~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~----~~~~v~~~~gd~~lGG~d~D~~l~~~~~~ 233 (595)
T TIGR02350 158 LEVLRIINEPTAAALAYGLDKSKKDEKILVFDLGGGTFDVSILEIGD----GVFEVLSTAGDTHLGGDDFDQRIIDWLAD 233 (595)
T ss_pred CceEEEecchHHHHHHHhhcccCCCcEEEEEECCCCeEEEEEEEecC----CeEEEEEecCCcccCchhHHHHHHHHHHH
Confidence 99999999999999999987655688999999999999999999976 89999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 244 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 323 (1242)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 323 (1242)
+|+.+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+..++.++.+.|||++|+++++|+++++..++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~~ 313 (595)
T TIGR02350 234 EFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFEELTADLVERTKEPVRQ 313 (595)
T ss_pred HHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998898899999999999999999999999999999887665555678899999999999999999999999999
Q ss_pred HHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeEEE
Q psy5911 324 ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGIE 403 (1242)
Q Consensus 324 ~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sigi~ 403 (1242)
+|+++++++.+|+.|+||||+||+|+|++.|+++||.++..+.||++|||+|||++|+.+++..+++.+.|++|++||++
T Consensus 314 ~l~~a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~~~~~~~~~pdeava~GAa~~aa~l~~~~~~~~~~d~~~~~igi~ 393 (595)
T TIGR02350 314 ALKDAGLSASDIDEVILVGGSTRIPAVQELVKDFFGKEPNKSVNPDEVVAIGAAIQGGVLKGDVKDVLLLDVTPLSLGIE 393 (595)
T ss_pred HHHHcCCCHhHCcEEEEECCcccChHHHHHHHHHhCCcccCCcCcHHHHHHHHHHHHHHhcCCcccceeeecccceeEEE
Confidence 99999999999999999999999999999999999988999999999999999999999999888999999999999999
Q ss_pred eeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecCCe
Q psy5911 404 TMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDANG 483 (1242)
Q Consensus 404 ~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g 483 (1242)
+.++.+.+|||+|++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|+++++.++|.++|+|+|++|.||
T Consensus 394 ~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~G 473 (595)
T TIGR02350 394 TLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFDIDANG 473 (595)
T ss_pred ecCCceEEEEeCCCcCCccceEeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECCCCCCCCCCceEEEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 484 ILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 484 ~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
+|+|++.+..+|++..+.+....+|++++++++.++..++...|+..++..+++|++++++
T Consensus 474 ~l~v~~~~~~~~~~~~~~i~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lEs~i 534 (595)
T TIGR02350 474 ILHVSAKDKGTGKEQSITITASSGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNADSLA 534 (595)
T ss_pred eEEEEEEEccCCceEEEEeccccccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999887889999999999999999999999999999999997664
No 26
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=1.4e-87 Score=818.95 Aligned_cols=522 Identities=45% Similarity=0.718 Sum_probs=490.1
Q ss_pred EEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChHHH
Q psy5911 5 IIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 84 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 84 (1242)
+||||||||||+||++++|++++++|..|.+.+||+|+|.+++.+++|..|+.+...+|.++++++||+||+++.+...
T Consensus 1 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~~~d~~~- 79 (599)
T TIGR01991 1 AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKDGGVEVGKEALAAAAEDPKNTISSVKRLMGRSIEDIKT- 79 (599)
T ss_pred CEEEEEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEecHHHHHhhhhChhhhHHHHHHHhCCCccchhh-
Confidence 5899999999999999999999999999999999999999777899999999999999999999999999999876432
Q ss_pred HHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy5911 85 TVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGL 164 (1242)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl 164 (1242)
.+.+||.++...++.+.+.+.+..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++||+.|||
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~p~ei~a~iL~~lk~~a~~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl 157 (599)
T TIGR01991 80 --FSILPYRFVDGPGEMVRLRTVQGTVTPVEVSAEILKKLKQRAEESLGGDLVGAVITVPAYFDDAQRQATKDAARLAGL 157 (599)
T ss_pred --cccCCEEEEEcCCCceEEEeCCCEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677899999888889999888788999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHH
Q psy5911 165 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 244 (1242)
Q Consensus 165 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~ 244 (1242)
+++++++||+|||++|+.... .+.++||||+||||||+|++++.+ +.++++++.|+.+|||++||+.|++|+.++
T Consensus 158 ~v~~li~EPtAAAlay~~~~~-~~~~vlV~DlGgGT~DvSi~~~~~----~~~~vla~~gd~~lGG~d~D~~l~~~l~~~ 232 (599)
T TIGR01991 158 NVLRLLNEPTAAAVAYGLDKA-SEGIYAVYDLGGGTFDVSILKLTK----GVFEVLATGGDSALGGDDFDHALAKWILKQ 232 (599)
T ss_pred CceEEecCHHHHHHHHhhccC-CCCEEEEEEcCCCeEEEEEEEEcC----CeEEEEEEcCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999998764 578899999999999999999987 889999999999999999999999999976
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q psy5911 245 FKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVA 324 (1242)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~ 324 (1242)
+ +.+...++..+.+|+.+||++|+.||....+.+.++. . +.++.++|||++|+++++|+++++..+++++
T Consensus 233 ~----~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~--~----g~~~~~~itr~efe~l~~~ll~~i~~~i~~~ 302 (599)
T TIGR01991 233 L----GISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTL--D----GKDFKGKLTRDEFEALIQPLVQKTLSICRRA 302 (599)
T ss_pred h----CCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEE--C----CcEEEEEEeHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4455668889999999999999999999888888764 1 2578999999999999999999999999999
Q ss_pred HHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC--ccceEEEeeccceeEE
Q psy5911 325 LNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV--VKDVLLLDVTPLTLGI 402 (1242)
Q Consensus 325 l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~--~~~~~~~d~~~~sigi 402 (1242)
|+++++.+.+|+.|+||||+||+|+|+++|+++|+.++..+.||++|||+|||++|+.+++. .+++.+.|++|++||+
T Consensus 303 L~~a~~~~~~id~ViLvGGssriP~V~~~l~~~f~~~~~~~~npdeaVA~GAai~a~~l~~~~~~~~~~l~dv~p~slgi 382 (599)
T TIGR01991 303 LRDAGLSVEEIKGVVLVGGSTRMPLVRRAVAELFGQEPLTDIDPDQVVALGAAIQADLLAGNRIGNDLLLLDVTPLSLGI 382 (599)
T ss_pred HHHcCCChhhCCEEEEECCcCCChHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHHHhccccccCceEEEEeeeeeeEE
Confidence 99999999999999999999999999999999999888889999999999999999999874 3578999999999999
Q ss_pred EeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecCC
Q psy5911 403 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 482 (1242)
Q Consensus 403 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~ 482 (1242)
++.+|.+.+|||||++||+++++.|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.|+|.++|+|+|++|.|
T Consensus 383 ~~~~g~~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 462 (599)
T TIGR01991 383 ETMGGLVEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDAD 462 (599)
T ss_pred EecCCEEEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 483 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 483 g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|+|+|++.+..||++..+.|..+.+|++++++++.+++++++.+|...++..++++++++++
T Consensus 463 gil~V~a~~~~t~~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 524 (599)
T TIGR01991 463 GLLTVSAQEQSTGVEQSIQVKPSYGLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERIL 524 (599)
T ss_pred CeEEEEEEECCCCcEEEEecccccCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888889999999999999999999999999999999886665
No 27
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=4.5e-88 Score=814.92 Aligned_cols=550 Identities=35% Similarity=0.550 Sum_probs=499.5
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCCh---
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE--- 721 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~--- 721 (1242)
++|||+||++++++++..|++++++|..|++.+||+|+|.++ .+++|..| +++++||+||+.+++.
T Consensus 21 viGIDlGTT~S~va~~~~~~~~ii~n~~g~~~tPS~V~f~~~-~~~vG~~A----------ti~~~KrliG~~~~~~~~~ 89 (595)
T PRK01433 21 AVGIDFGTTNSLIAIATNRKVKVIKSIDDKELIPTTIDFTSN-NFTIGNNK----------GLRSIKRLFGKTLKEILNT 89 (595)
T ss_pred EEEEEcCcccEEEEEEeCCeeEEEECCCCCeecCeEEEEcCC-CEEECchh----------hHHHHHHHhCCCchhhccc
Confidence 689999999999999999999999999999999999999865 58999987 7999999999998752
Q ss_pred -hHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 722 -IVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 722 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
......+. ......+...+.+.++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||++|++||+
T Consensus 90 ~~~~~~~k~----~~~~~~~~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg~~v~~aVITVPa~f~~~qR~a~~~Aa~ 165 (595)
T PRK01433 90 PALFSLVKD----YLDVNSSELKLNFANKQLRIPEIAAEIFIYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVMLAAK 165 (595)
T ss_pred hhhHhhhhh----eeecCCCeeEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 22222221 1222344556777788999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINH 880 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~ 880 (1242)
+||++++++++||+|||++|+.... ..+++||||+||||||+|++++.+ +.++++++.|+.++||+|||.+|++|
T Consensus 166 ~AGl~v~~li~EPtAAAlay~~~~~-~~~~vlV~DlGGGT~DvSi~~~~~----~~~~V~at~gd~~lGG~d~D~~l~~~ 240 (595)
T PRK01433 166 IAGFEVLRLIAEPTAAAYAYGLNKN-QKGCYLVYDLGGGTFDVSILNIQE----GIFQVIATNGDNMLGGNDIDVVITQY 240 (595)
T ss_pred HcCCCEEEEecCcHHHHHHHhcccC-CCCEEEEEECCCCcEEEEEEEEeC----CeEEEEEEcCCcccChHHHHHHHHHH
Confidence 9999999999999999999998764 456899999999999999999987 89999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHH
Q psy5911 881 LIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKP 960 (1242)
Q Consensus 881 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~ 960 (1242)
+..+|... .+.. .++.||++|+.||....... ..++|||++|+++++|+++++..+
T Consensus 241 ~~~~~~~~------~~~~----~~~~~ekaK~~LS~~~~~~~--------------~~~~itr~efe~l~~~l~~~~~~~ 296 (595)
T PRK01433 241 LCNKFDLP------NSID----TLQLAKKAKETLTYKDSFNN--------------DNISINKQTLEQLILPLVERTINI 296 (595)
T ss_pred HHHhcCCC------CCHH----HHHHHHHHHHhcCCCccccc--------------ceEEEcHHHHHHHHHHHHHHHHHH
Confidence 99887532 2222 23459999999998764311 267899999999999999999999
Q ss_pred HHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeeccccee
Q psy5911 961 CEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTL 1040 (1242)
Q Consensus 961 i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~ 1040 (1242)
++++|++++ ..+|+.|+||||+||+|+|+++|+++||.++..+.||++|||+|||++|+.+++...++.+.|++|++|
T Consensus 297 i~~~L~~a~--~~~Id~ViLvGGssriP~v~~~l~~~f~~~~~~~~npdeaVA~GAAi~a~~l~~~~~~~~l~Dv~p~sl 374 (595)
T PRK01433 297 AQECLEQAG--NPNIDGVILVGGATRIPLIKDELYKAFKVDILSDIDPDKAVVWGAALQAENLIAPHTNSLLIDVVPLSL 374 (595)
T ss_pred HHHHHhhcC--cccCcEEEEECCcccChhHHHHHHHHhCCCceecCCchHHHHHHHHHHHHHhhCCccceEEEEecccce
Confidence 999999998 568999999999999999999999999998889999999999999999999998778899999999999
Q ss_pred eEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEc
Q psy5911 1041 GIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLD 1120 (1242)
Q Consensus 1041 gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d 1120 (1242)
|+++.+|.+.++||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|+++||.|+|.++|+|+|++|
T Consensus 375 gi~~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf~id 454 (595)
T PRK01433 375 GMELYGGIVEKIIMRNTPIPISVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAID 454 (595)
T ss_pred EEEecCCEEEEEEECCCcccceeeEEeEeecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCH
Q psy5911 1121 ANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITD 1200 (1242)
Q Consensus 1121 ~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~ 1200 (1242)
.||+|+|++.+..||++.++.|..+.+++++|+++++++++++..+|...++..+++|+++++++.+++.++++...+++
T Consensus 455 ~~Gil~V~a~~~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 534 (595)
T PRK01433 455 ADGILSVSAYEKISNTSHAIEVKPNHGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFNIERAIAELTTLLSE 534 (595)
T ss_pred CCCcEEEEEEEcCCCcEEEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCH
Confidence 99999999999999999999998877899999999999999999999999999999999999999999999776677899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy5911 1201 EEKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENII 1240 (1242)
Q Consensus 1201 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~ 1240 (1242)
++|+++...++++++||..++...+++.+++|++.+.+.+
T Consensus 535 ~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 574 (595)
T PRK01433 535 SEISIINSLLDNIKEAVHARDIILINNSIKEFKSKIKKSM 574 (595)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888888877777777776643
No 28
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=6.3e-87 Score=821.17 Aligned_cols=534 Identities=51% Similarity=0.815 Sum_probs=500.5
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
...+||||||||||+||++++|.+++++|..|++.+||+|+|.++ .+++|..|+.+..++|.++++++||+||++++++
T Consensus 3 ~~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~-~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~ 81 (653)
T PTZ00009 3 KGPAIGIDLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDS 81 (653)
T ss_pred cccEEEEEeCcccEEEEEEeCCceEEEECCCCCccCCcEEEECCC-CEEEcHHHHHhhhhCcccEEhhhHHHhCCCCCch
Confidence 457999999999999999999999999999999999999999864 6799999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEc----CeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVK----DKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
.++...+.|||.++...++...+.+. .+.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~ 161 (653)
T PTZ00009 82 VVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVLQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKD 161 (653)
T ss_pred hHhhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHHHHHHHHHHHHhCCCcceeEEEeCCCCCHHHHHHHHH
Confidence 99999999999998888887766653 36899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCCC-CCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKKP-DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~~-~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
||++|||++++|++||+|||++|+..... .+.++|||||||||||+|++++.. +.++++++.|+.+|||++||.+
T Consensus 162 Aa~~AGl~v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~v~a~~gd~~lGG~d~D~~ 237 (653)
T PTZ00009 162 AGTIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIED----GIFEVKATAGDTHLGGEDFDNR 237 (653)
T ss_pred HHHHcCCceeEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEEEeC----CeEEEEEecCCCCCChHHHHHH
Confidence 99999999999999999999999986543 468899999999999999999987 8899999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHH
Q psy5911 237 IINHLIYEFKIEN-GVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLIS 315 (1242)
Q Consensus 237 l~~~l~~~~~~~~-~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~ 315 (1242)
|++|+.++|+.++ +.++..+++++.+|+.+||++|+.||.+.++.+.++.+..+ .+++++|||++|+++++|+++
T Consensus 238 l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~i~i~~~~~~----~d~~~~itR~~fe~l~~~l~~ 313 (653)
T PTZ00009 238 LVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEG----IDYNVTISRARFEELCGDYFR 313 (653)
T ss_pred HHHHHHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEEEEEEeccCC----ceEEEEECHHHHHHHHHHHHH
Confidence 9999999998876 46778889999999999999999999999999999876654 568999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc-cccccCCCcchhhHhHHHHhhhhhcCC----ccce
Q psy5911 316 KSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSGV----VKDV 390 (1242)
Q Consensus 316 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~~~~~~~p~~ava~GAa~~a~~l~~~----~~~~ 390 (1242)
++..+++++|+++++++.+|+.|+||||+||+|+|+++|+++|+ .++...+||++|||+|||++|+.+++. .+++
T Consensus 314 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ls~~~~~~~~~~ 393 (653)
T PTZ00009 314 NTLQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDL 393 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCCCCCcchHHhhhhhhhHHHhcCCccccccce
Confidence 99999999999999999999999999999999999999999996 578889999999999999999999873 4678
Q ss_pred EEEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCc
Q psy5911 391 LLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGV 470 (1242)
Q Consensus 391 ~~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~ 470 (1242)
.+.|++|++||++..++.+.+|||+|++||++++++|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.++|.
T Consensus 394 ~~~dv~p~slgi~~~~~~~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~ 473 (653)
T PTZ00009 394 LLLDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGV 473 (653)
T ss_pred EEEeecccccCccccCCceEEEEeCCCcCCccceeEeEeecCCCceEEEEEEecccccCCCCceEEEEEEcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecC-CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 471 PQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 471 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
++|+|+|++|.||+|+|++.+..+|++..+.|... ..|+.++++++.+++.++..+|...+++.+++|+++.++
T Consensus 474 ~~i~v~f~id~~Gil~v~~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eakN~lEs~I 548 (653)
T PTZ00009 474 PQIEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYC 548 (653)
T ss_pred ceEEEEEEECCCCeEEEEEecccCCceeeEEEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999988744 569999999999999999999999999999999997765
No 29
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=5.5e-87 Score=814.83 Aligned_cols=519 Identities=44% Similarity=0.717 Sum_probs=485.4
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChHH
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 83 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 83 (1242)
.+||||||||||+||++.+|.+++++|..|++.+||+|+|.++ .++||..|+.+...+|.++++++||+||+++.+.
T Consensus 20 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~-~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~-- 96 (616)
T PRK05183 20 LAVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLED-GIEVGYEARANAAQDPKNTISSVKRFMGRSLADI-- 96 (616)
T ss_pred eEEEEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEcCC-CEEEcHHHHHhhHhCchhhHHHHHHHhCCCchhh--
Confidence 6899999999999999999999999999999999999999876 4899999999999999999999999999998763
Q ss_pred HHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q psy5911 84 QTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAG 163 (1242)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AG 163 (1242)
+...+.+||.+....++.+.+.+.+..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++||++||
T Consensus 97 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AG 176 (616)
T PRK05183 97 QQRYPHLPYQFVASENGMPLIRTAQGLKSPVEVSAEILKALRQRAEETLGGELDGAVITVPAYFDDAQRQATKDAARLAG 176 (616)
T ss_pred hhhhhcCCeEEEecCCCceEEEecCCeEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 44567789999888888888888878999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHH
Q psy5911 164 LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 243 (1242)
Q Consensus 164 l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~ 243 (1242)
|+++++++||+|||++|+.... .++++||||+||||||+|++++.+ +.++++++.|+.+|||++||..|++|+.+
T Consensus 177 l~v~~li~EPtAAAlay~~~~~-~~~~vlV~DlGGGT~DvSv~~~~~----~~~evlat~gd~~lGG~d~D~~l~~~~~~ 251 (616)
T PRK05183 177 LNVLRLLNEPTAAAIAYGLDSG-QEGVIAVYDLGGGTFDISILRLSK----GVFEVLATGGDSALGGDDFDHLLADWILE 251 (616)
T ss_pred CCeEEEecchHHHHHHhhcccC-CCCEEEEEECCCCeEEEEEEEeeC----CEEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999998654 478899999999999999999987 78999999999999999999999999998
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 244 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 323 (1242)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 323 (1242)
+|+ .+...+++++.+|+.+||++|+.||....+.+.++.. ...|||++|+++++|+++++..++++
T Consensus 252 ~~~----~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~----------~~~itr~efe~l~~~l~~~~~~~i~~ 317 (616)
T PRK05183 252 QAG----LSPRLDPEDQRLLLDAARAAKEALSDADSVEVSVALW----------QGEITREQFNALIAPLVKRTLLACRR 317 (616)
T ss_pred HcC----CCcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEecC----------CCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 775 3344678899999999999999999998888877421 12499999999999999999999999
Q ss_pred HHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC--ccceEEEeeccceeE
Q psy5911 324 ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV--VKDVLLLDVTPLTLG 401 (1242)
Q Consensus 324 ~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~--~~~~~~~d~~~~sig 401 (1242)
+|+++++.+.+|+.|+||||+||+|+|+++|+++||.++..+.||+++||+|||++|+.+++. ..++.+.|++|++||
T Consensus 318 ~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg~~~~~~~npdeaVA~GAAi~a~~l~~~~~~~~~~l~dv~p~slg 397 (616)
T PRK05183 318 ALRDAGVEADEVKEVVMVGGSTRVPLVREAVGEFFGRTPLTSIDPDKVVAIGAAIQADILAGNKPDSDMLLLDVIPLSLG 397 (616)
T ss_pred HHHHcCCCcccCCEEEEECCcccChHHHHHHHHHhccCcCcCCCchHHHHHHHHHHHHHhccccccCceEEEeecccccc
Confidence 999999999999999999999999999999999999888889999999999999999999874 458999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
+++.+|.+.+|||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|++|.
T Consensus 398 i~~~~g~~~~ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~ 477 (616)
T PRK05183 398 LETMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDA 477 (616)
T ss_pred ceecCCeEEEEEeCCCcccccccEEEEeccCCCeEEEEEEecccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
||+|+|++.++.+|++.++.|..+.+|++++++++.+++++++.+|...++..+.+++++.++
T Consensus 478 ~Gil~V~a~~~~~~~~~~~~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i 540 (616)
T PRK05183 478 DGLLSVTAMEKSTGVEASIQVKPSYGLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVL 540 (616)
T ss_pred CCeEEEEEEEcCCCcEEEecccccccCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999877889999999999999999999999999999999987665
No 30
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-86 Score=792.78 Aligned_cols=568 Identities=59% Similarity=0.889 Sum_probs=541.3
Q ss_pred ccccccCCceEEEEEEEeCC-cceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 644 PTFGKKKGTTNSCVAVLNNG-KPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
.++|||+||+|||+++++.| .+.++.|..|.+.+||+|+|..++++++|..|+.++..+|.++++.+||++|+...
T Consensus 6 ~~iGIDlGTTNS~vA~~~~~~~~~vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~--- 82 (579)
T COG0443 6 KAIGIDLGTTNSVVAVMRGGGLPKVIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN--- 82 (579)
T ss_pred eEEEEEcCCCcEEEEEEeCCCCceEecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC---
Confidence 47899999999999999988 79999999999999999999987789999999999999999999999999998711
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
.....+.+.++.++|+++++++|++|++.++.+++.++.++||||||||++.||+++++|+++|
T Consensus 83 ----------------~~~~~~~~~~~~~~~eeisa~~L~~lk~~ae~~lg~~v~~~VItVPayF~d~qR~at~~A~~ia 146 (579)
T COG0443 83 ----------------GLKISVEVDGKKYTPEEISAMILTKLKEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAARIA 146 (579)
T ss_pred ----------------CCcceeeeCCeeeCHHHHHHHHHHHHHHHHHHhhCCCcceEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 1124566777899999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
||+++++++||+|||++|+.+.. .+.+|||||+||||||+|++++.. +.++++++.|+.+|||+|||.+|++|+.
T Consensus 147 Gl~vlrlinEPtAAAlayg~~~~-~~~~vlV~DlGGGTfDvSll~~~~----g~~ev~at~gd~~LGGddfD~~l~~~~~ 221 (579)
T COG0443 147 GLNVLRLINEPTAAALAYGLDKG-KEKTVLVYDLGGGTFDVSLLEIGD----GVFEVLATGGDNHLGGDDFDNALIDYLV 221 (579)
T ss_pred CCCeEEEecchHHHHHHhHhccC-CCcEEEEEEcCCCCEEEEEEEEcC----CEEEEeecCCCcccCchhHHHHHHHHHH
Confidence 99999999999999999999887 788999999999999999999986 7999999999999999999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
.+|+.+++.++..++.+++||+.+||++|+.||...++.+.++++..+ .++..+|||++||+++.+++.++...+.
T Consensus 222 ~~f~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~~~~~----~~~~~~ltR~~~E~l~~dll~r~~~~~~ 297 (579)
T COG0443 222 MEFKGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPSIGGD----IDLLKELTRAKFEELILDLLERTIEPVE 297 (579)
T ss_pred HHhhccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhhcccc----chhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998876654 4578899999999999999999999999
Q ss_pred HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeE
Q psy5911 963 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi 1042 (1242)
+++.+++++..+|+.|+||||++|||.|++.++++|++++...+||+++||.|||++|+.+++..+++++.|++|+++|+
T Consensus 298 ~al~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~~~~~~~inpdeava~GAa~qa~~l~~~~~d~ll~Dv~plslgi 377 (579)
T COG0443 298 QALKDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFGKEPEKSINPDEAVALGAAIQAAVLSGEVPDVLLLDVIPLSLGI 377 (579)
T ss_pred HHHHHcCCChhhCceEEEccceeccHHHHHHHHHHhCccccccCCccHHHHHHHHHHHHhhcCcccCceEEeeeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.++.+.++|++|+++|++++..|.+..|+|+.+.+++++|++.+..+|..+|.|.+.++||.|+|.++|+|+|.+|.|
T Consensus 378 e~~~~~~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~~ 457 (579)
T COG0443 378 ETLGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDAN 457 (579)
T ss_pred ccCcchhhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+++|++.++.+|++.+++|..+.+|+++++++|.+.+..+.+.|+..++..+.+|.++.+++.++..|.+.. .+++++
T Consensus 458 gi~~v~a~~~~~~k~~~i~i~~~~~ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 536 (579)
T COG0443 458 GILNVTAKDLGTGKEQSITIKASSGLSDEEIERMVEDAEANAALDKKFRELVEARNEAESLIYSLEKALKEIV-KVSEEE 536 (579)
T ss_pred cceEeeeecccCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-cCCHHH
Confidence 9999999999999999999999888999999999999999999999999999999999999999999997766 899999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh
Q psy5911 1203 KESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIK 1241 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~ 1241 (1242)
++++..++.++++||+.. .++++.+.++|+....++..
T Consensus 537 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~~~~~~~ 574 (579)
T COG0443 537 KEKIEEAITDLEEALEGE-KEEIKAKIEELQEVTQKLAE 574 (579)
T ss_pred HHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999984 88999999999998887764
No 31
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=4e-85 Score=789.32 Aligned_cols=505 Identities=37% Similarity=0.584 Sum_probs=451.5
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|..+||||||||||+||++.+|.+++++|..|++.+||+|+|.++ .++||..| +++++||+||+++++.
T Consensus 18 ~~~viGIDlGTT~S~va~~~~~~~~ii~n~~g~~~tPS~V~f~~~-~~~vG~~A----------ti~~~KrliG~~~~~~ 86 (595)
T PRK01433 18 RQIAVGIDFGTTNSLIAIATNRKVKVIKSIDDKELIPTTIDFTSN-NFTIGNNK----------GLRSIKRLFGKTLKEI 86 (595)
T ss_pred CceEEEEEcCcccEEEEEEeCCeeEEEECCCCCeecCeEEEEcCC-CEEECchh----------hHHHHHHHhCCCchhh
Confidence 346999999999999999999999999999999999999999865 58999987 7999999999998752
Q ss_pred ----HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 82 ----IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
......+ .......+...+.+.++.++|+++++++|++|++.|+.+++.++.++||||||||++.||+++++
T Consensus 87 ~~~~~~~~~~k----~~~~~~~~~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg~~v~~aVITVPa~f~~~qR~a~~~ 162 (595)
T PRK01433 87 LNTPALFSLVK----DYLDVNSSELKLNFANKQLRIPEIAAEIFIYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVML 162 (595)
T ss_pred ccchhhHhhhh----heeecCCCeeEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHH
Confidence 2211111 11222344556777889999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 237 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l 237 (1242)
||+.||++++++++||+|||++|+.... ...++||||+||||||+|++++.+ +.++|+++.|+.+|||+|||.+|
T Consensus 163 Aa~~AGl~v~~li~EPtAAAlay~~~~~-~~~~vlV~DlGGGT~DvSi~~~~~----~~~~V~at~gd~~lGG~d~D~~l 237 (595)
T PRK01433 163 AAKIAGFEVLRLIAEPTAAAYAYGLNKN-QKGCYLVYDLGGGTFDVSILNIQE----GIFQVIATNGDNMLGGNDIDVVI 237 (595)
T ss_pred HHHHcCCCEEEEecCcHHHHHHHhcccC-CCCEEEEEECCCCcEEEEEEEEeC----CeEEEEEEcCCcccChHHHHHHH
Confidence 9999999999999999999999998764 456899999999999999999987 89999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHH
Q psy5911 238 INHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKS 317 (1242)
Q Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i 317 (1242)
++|+..+|... .+.. .++.||++|+.||.+..... ..++|||++|+++++|+++++
T Consensus 238 ~~~~~~~~~~~------~~~~----~~~~~ekaK~~LS~~~~~~~--------------~~~~itr~efe~l~~~l~~~~ 293 (595)
T PRK01433 238 TQYLCNKFDLP------NSID----TLQLAKKAKETLTYKDSFNN--------------DNISINKQTLEQLILPLVERT 293 (595)
T ss_pred HHHHHHhcCCC------CCHH----HHHHHHHHHHhcCCCccccc--------------ceEEEcHHHHHHHHHHHHHHH
Confidence 99999887422 2222 23469999999998764211 167899999999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeecc
Q psy5911 318 LKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTP 397 (1242)
Q Consensus 318 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~ 397 (1242)
..+++++|++++ ..+|+.|+||||+||+|+|+++|+++||.++..+.||+++||+|||++|+.+++...++.+.|++|
T Consensus 294 ~~~i~~~L~~a~--~~~Id~ViLvGGssriP~v~~~l~~~f~~~~~~~~npdeaVA~GAAi~a~~l~~~~~~~~l~Dv~p 371 (595)
T PRK01433 294 INIAQECLEQAG--NPNIDGVILVGGATRIPLIKDELYKAFKVDILSDIDPDKAVVWGAALQAENLIAPHTNSLLIDVVP 371 (595)
T ss_pred HHHHHHHHhhcC--cccCcEEEEECCcccChhHHHHHHHHhCCCceecCCchHHHHHHHHHHHHHhhCCccceEEEEecc
Confidence 999999999998 568999999999999999999999999998889999999999999999999998778899999999
Q ss_pred ceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEE
Q psy5911 398 LTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSF 477 (1242)
Q Consensus 398 ~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~ 477 (1242)
++||+++.+|.+.+|||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|
T Consensus 372 ~slgi~~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf 451 (595)
T PRK01433 372 LSLGMELYGGIVEKIIMRNTPIPISVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTF 451 (595)
T ss_pred cceEEEecCCEEEEEEECCCcccceeeEEeEeecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHHHHHHhhhHH
Q psy5911 478 DLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIILEEKFCSFVL 553 (1242)
Q Consensus 478 ~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~~~~~~~~~a 553 (1242)
++|.||+|+|++.+..||++.++.|..+.+|++++++++.++++++..++...++..+.+++++..+ ....+.+.
T Consensus 452 ~id~~Gil~V~a~~~~t~~~~~~~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~ 526 (595)
T PRK01433 452 AIDADGILSVSAYEKISNTSHAIEVKPNHGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALI-FNIERAIA 526 (595)
T ss_pred EECCCCcEEEEEEEcCCCcEEEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 9999999999999999999999999887889999999999999989889988888888888876554 33444443
No 32
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-84 Score=777.46 Aligned_cols=514 Identities=62% Similarity=0.937 Sum_probs=489.6
Q ss_pred CeEEEEEcCccceEEEEEECC-eEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNG-KPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g-~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
..+|||||||||||||+++++ .+.++.|..|.+.+||+|+|..++++++|..|+.+...+|.++++.+||++|+...
T Consensus 5 ~~~iGIDlGTTNS~vA~~~~~~~~~vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~-- 82 (579)
T COG0443 5 KKAIGIDLGTTNSVVAVMRGGGLPKVIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN-- 82 (579)
T ss_pred ceEEEEEcCCCcEEEEEEeCCCCceEecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC--
Confidence 479999999999999999988 79999999999999999999987789999999999999999999999999998611
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
.....+.+.++.++|+++++++|++|++.++.+++..+.++||||||||++.||+++++|+++
T Consensus 83 -----------------~~~~~~~~~~~~~~~eeisa~~L~~lk~~ae~~lg~~v~~~VItVPayF~d~qR~at~~A~~i 145 (579)
T COG0443 83 -----------------GLKISVEVDGKKYTPEEISAMILTKLKEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAARI 145 (579)
T ss_pred -----------------CCcceeeeCCeeeCHHHHHHHHHHHHHHHHHHhhCCCcceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 112455667789999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
|||+++++++||+|||++|+.+.. .+.+|||||+||||||+|++++.. +.++++++.||.+|||+|||.+|++|+
T Consensus 146 aGl~vlrlinEPtAAAlayg~~~~-~~~~vlV~DlGGGTfDvSll~~~~----g~~ev~at~gd~~LGGddfD~~l~~~~ 220 (579)
T COG0443 146 AGLNVLRLINEPTAAALAYGLDKG-KEKTVLVYDLGGGTFDVSLLEIGD----GVFEVLATGGDNHLGGDDFDNALIDYL 220 (579)
T ss_pred cCCCeEEEecchHHHHHHhHhccC-CCcEEEEEEcCCCCEEEEEEEEcC----CEEEEeecCCCcccCchhHHHHHHHHH
Confidence 999999999999999999999887 788999999999999999999986 799999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
..+|+.+++.++..++.++++|+.+||++|+.||+..++.+.+++...+ .++..+|||++||+++.+++.++..++
T Consensus 221 ~~~f~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~~~~~----~~~~~~ltR~~~E~l~~dll~r~~~~~ 296 (579)
T COG0443 221 VMEFKGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPSIGGD----IDLLKELTRAKFEELILDLLERTIEPV 296 (579)
T ss_pred HHHhhccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhhcccc----chhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876654 567889999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeE
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 401 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sig 401 (1242)
+++|.+++++..+|+.|+||||++|||.|++.++++|++++...+||+++||.|||++|+.+++..+++++.|++|+++|
T Consensus 297 ~~al~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~~~~~~~inpdeava~GAa~qa~~l~~~~~d~ll~Dv~plslg 376 (579)
T COG0443 297 EQALKDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFGKEPEKSINPDEAVALGAAIQAAVLSGEVPDVLLLDVIPLSLG 376 (579)
T ss_pred HHHHHHcCCChhhCceEEEccceeccHHHHHHHHHHhCccccccCCccHHHHHHHHHHHHhhcCcccCceEEeeeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998779999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
+++.++.+..+|++|+++|++++..|++..|+|+.+.++++||++.+..+|..+|.|.+.++||.|+|.++|+|+|.+|.
T Consensus 377 ie~~~~~~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~ 456 (579)
T COG0443 377 IETLGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDA 456 (579)
T ss_pred cccCcchhhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
||+++|++.++.+|++..++|..+.+|++++++.|.++++..++.|...+++.+.+++.+...
T Consensus 457 ~gi~~v~a~~~~~~k~~~i~i~~~~~ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~ 519 (579)
T COG0443 457 NGILNVTAKDLGTGKEQSITIKASSGLSDEEIERMVEDAEANAALDKKFRELVEARNEAESLI 519 (579)
T ss_pred CcceEeeeecccCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999988889999999999999999999988888888888886654
No 33
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=2.7e-82 Score=793.02 Aligned_cols=590 Identities=45% Similarity=0.715 Sum_probs=534.7
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|||+||++++++++++|.++++.|..|++.+||+|+|.++ ++++|..|...+.++|.++++++|||||+.++++.++
T Consensus 1 viGID~Gt~~~~va~~~~~~~~ii~~~~~~~~~ps~v~~~~~-~~~~G~~a~~~~~~~~~~~~~~~k~liG~~~~~~~~~ 79 (602)
T PF00012_consen 1 VIGIDLGTTNSKVAVFKNGKPEIILNEEGKRKTPSVVSFSDN-ERLVGEDAKSQMIRNPKNTIYNLKRLIGRKFDDPDVQ 79 (602)
T ss_dssp EEEEEE-SSEEEEEEEETTEEEEE--TTS-SSEESEEEEESS-CEEETHHHHHTTTTSGGGEEESGGGTTTSBTTSHHHH
T ss_pred CEEEEeccCCEEEEEEEeccccccccccccccccceeeEeee-cccCCcchhhhcccccccccccccccccccccccccc
Confidence 469999999999999999999999999999999999999977 7899999999999999999999999999999999999
Q ss_pred hhcccCceEEEEcCCCCeEEEEc--Ce--eeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEVK--DQ--YCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
...+.+||.++..+++...+.+. +. .++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~~~~Aa~ 159 (602)
T PF00012_consen 80 KEKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMILKYLKEMAEKYLGEKVTDVVITVPAYFTDEQRQALRDAAE 159 (602)
T ss_dssp HHHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEE-TT--HHHHHHHHHHHH
T ss_pred hhhhcccccccccccccccccccccccceeeeeecccccchhhhcccchhhcccccccceeeechhhhhhhhhccccccc
Confidence 99999999999998898888775 54 899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINH 880 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~ 880 (1242)
.|||+++++++||+|||++|+......++++||||+||||+|+|++++.+ +.++++++.++..+||.+||.+|++|
T Consensus 160 ~agl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~Gggt~dvs~~~~~~----~~~~v~~~~~~~~lGG~~~D~~l~~~ 235 (602)
T PF00012_consen 160 LAGLNVLRLINEPTAAALAYGLERSDKGKTVLVVDFGGGTFDVSVVEFSN----GQFEVLATAGDNNLGGRDFDEALAEY 235 (602)
T ss_dssp HTT-EEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEEESSEEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred ccccccceeecccccccccccccccccccceeccccccceEeeeehhccc----ccccccccccccccccceecceeecc
Confidence 99999999999999999999988776788999999999999999999987 89999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccC--CceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHH
Q psy5911 881 LIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSN--AEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSL 958 (1242)
Q Consensus 881 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~--~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~ 958 (1242)
+.++|+.+++.+...+++.+.+|+.+||++|+.||. .....+.++.+..+ +.++.+.|||++|++++.|+++++.
T Consensus 236 ~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~~~~~~~~~---~~~~~~~itr~~fe~l~~~~~~~~~ 312 (602)
T PF00012_consen 236 LLEKFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEITISIESLYDD---GEDFSITITREEFEELCEPLLERII 312 (602)
T ss_dssp HHHHHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEEEEEEEEETT---TEEEEEEEEHHHHHHHTHHHHHHTH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccceecccccccccccc
Confidence 999999999888888999999999999999999999 55556666555431 2678999999999999999999999
Q ss_pred HHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcc--cccceEEeecc
Q psy5911 959 KPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG--VVKDVLLLDVT 1036 (1242)
Q Consensus 959 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~--~~~~~~~~~~~ 1036 (1242)
.+++++|++++++..+|+.|+||||+||+|+|++.|++.|+.++..++||++|||+|||++|+.+++ ..+++.+.|++
T Consensus 313 ~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~~~~~~~~d~~ 392 (602)
T PF00012_consen 313 EPIEKALKDAGLKKEDIDSVLLVGGSSRIPYVQEALKELFGKKISKSVNPDEAVARGAALYAAILSGSFRVKDIKIIDVT 392 (602)
T ss_dssp HHHHHHHHHTT--GGGESEEEEESGGGGSHHHHHHHHHHTTSEEB-SS-TTTHHHHHHHHHHHHHHTSCSSTSSCESEBE
T ss_pred cccccccccccccccccceeEEecCcccchhhhhhhhhccccccccccccccccccccccchhhhccccccccccccccc
Confidence 9999999999999999999999999999999999999999988999999999999999999999988 56788999999
Q ss_pred cceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEE
Q psy5911 1037 PLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVS 1116 (1242)
Q Consensus 1037 ~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~ 1116 (1242)
|++|||+..++.+.+++|+|+++|+..+..|.+..++|+.+.+.+|+|++....+|..||++.+.++++.+.|.++|+|+
T Consensus 393 ~~~~~i~~~~~~~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~ 472 (602)
T PF00012_consen 393 PFSIGIEVSNGKFSKIIPKNTPIPSKKSKSFKTVTDNQTSISIDIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVT 472 (602)
T ss_dssp SSEEEEEETTTEEEEEESTTEBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEE
T ss_pred cccccccccccccccccccccccccccccccchhccccccccceeeeccccccccccccccccccccccccccccceeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccC
Q psy5911 1117 FDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENT 1196 (1242)
Q Consensus 1117 ~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~ 1196 (1242)
|++|.||+|+|++.+..++.+..+.+.....+++++++++.++++++..+|+..++..+++|++|+++|.+|+.+++...
T Consensus 473 f~ld~~Gil~V~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~kn~lE~~i~~~r~~l~~~~~ 552 (602)
T PF00012_consen 473 FELDENGILSVEAAEVETGKEEEVTVKKKETLSKEEIEELKKKLEEMDEEDEERRERAEAKNELESYIYELRDKLEEDKD 552 (602)
T ss_dssp EEEETTSEEEEEEEETTTTEEEEEEEESSSSSCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EeeeeeeehhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhhccccHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999877779999999999999999999999999999999999999999999977677
Q ss_pred CCCHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1197 KITDEEK-ESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1197 ~~~~~~~-~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
.++++++ +++++..+++.+|.++.+.++|++++++|++..+||..|
T Consensus 553 ~~~~~~~~~~l~~~~~wl~~~~~~~~~~e~~~kl~~L~~~~~~i~~r 599 (602)
T PF00012_consen 553 FVSEEEKKKKLKETSDWLEDNGEDADKEEYKEKLEELKKVIEPIKKR 599 (602)
T ss_dssp GSTHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887 444444444444444447899999999999999999865
No 34
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=1.7e-78 Score=758.73 Aligned_cols=532 Identities=48% Similarity=0.765 Sum_probs=488.9
Q ss_pred EEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChHHH
Q psy5911 5 IIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 84 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 84 (1242)
|||||||||||+||++.+|.++++.|..|++.+||+|+|.++ ++++|..|.....++|.++++++|||||+.++++.++
T Consensus 1 viGID~Gt~~~~va~~~~~~~~ii~~~~~~~~~ps~v~~~~~-~~~~G~~a~~~~~~~~~~~~~~~k~liG~~~~~~~~~ 79 (602)
T PF00012_consen 1 VIGIDLGTTNSKVAVFKNGKPEIILNEEGKRKTPSVVSFSDN-ERLVGEDAKSQMIRNPKNTIYNLKRLIGRKFDDPDVQ 79 (602)
T ss_dssp EEEEEE-SSEEEEEEEETTEEEEE--TTS-SSEESEEEEESS-CEEETHHHHHTTTTSGGGEEESGGGTTTSBTTSHHHH
T ss_pred CEEEEeccCCEEEEEEEeccccccccccccccccceeeEeee-cccCCcchhhhcccccccccccccccccccccccccc
Confidence 799999999999999999999999999999999999999976 8899999999999999999999999999999999999
Q ss_pred HHhccCCeEEEecCCCCeEEEEc--C--eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 85 TVLKMVPYKIVAADNGDAWVEVK--D--KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 160 (1242)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~ 160 (1242)
...+.+||.++..+++.+.+.+. + ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~~~~Aa~ 159 (602)
T PF00012_consen 80 KEKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMILKYLKEMAEKYLGEKVTDVVITVPAYFTDEQRQALRDAAE 159 (602)
T ss_dssp HHHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEE-TT--HHHHHHHHHHHH
T ss_pred hhhhcccccccccccccccccccccccceeeeeecccccchhhhcccchhhcccccccceeeechhhhhhhhhccccccc
Confidence 99999999999988888888775 4 4899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHH
Q psy5911 161 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINH 240 (1242)
Q Consensus 161 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~ 240 (1242)
.|||++++||+||+|||++|+......++++|||||||||+|+|++++.+ +.++++++.++..+||.+||.+|++|
T Consensus 160 ~agl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~Gggt~dvs~~~~~~----~~~~v~~~~~~~~lGG~~~D~~l~~~ 235 (602)
T PF00012_consen 160 LAGLNVLRLINEPTAAALAYGLERSDKGKTVLVVDFGGGTFDVSVVEFSN----GQFEVLATAGDNNLGGRDFDEALAEY 235 (602)
T ss_dssp HTT-EEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEEESSEEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred ccccccceeecccccccccccccccccccceeccccccceEeeeehhccc----ccccccccccccccccceecceeecc
Confidence 99999999999999999999988776789999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcC--CceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHH
Q psy5911 241 LIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSN--AEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSL 318 (1242)
Q Consensus 241 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~--~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~ 318 (1242)
+.++|+.+++.++..+++.+.+|+.+||++|+.||. .....+.++.+..+ +.++.+.|||++|+++++|+++++.
T Consensus 236 ~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~~~~~~~~~---~~~~~~~itr~~fe~l~~~~~~~~~ 312 (602)
T PF00012_consen 236 LLEKFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEITISIESLYDD---GEDFSITITREEFEELCEPLLERII 312 (602)
T ss_dssp HHHHHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEEEEEEEEETT---TEEEEEEEEHHHHHHHTHHHHHHTH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccceecccccccccccc
Confidence 999999999989989999999999999999999999 55666666655542 2689999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC--CccceEEEeec
Q psy5911 319 KPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG--VVKDVLLLDVT 396 (1242)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~--~~~~~~~~d~~ 396 (1242)
.+++++|++++++..+|+.|+||||+||+|+|++.|++.|+.++..+.||++|||+|||++|+.+++ ..+++.+.|++
T Consensus 313 ~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~~~~~~~~d~~ 392 (602)
T PF00012_consen 313 EPIEKALKDAGLKKEDIDSVLLVGGSSRIPYVQEALKELFGKKISKSVNPDEAVARGAALYAAILSGSFRVKDIKIIDVT 392 (602)
T ss_dssp HHHHHHHHHTT--GGGESEEEEESGGGGSHHHHHHHHHHTTSEEB-SS-TTTHHHHHHHHHHHHHHTSCSSTSSCESEBE
T ss_pred cccccccccccccccccceeEEecCcccchhhhhhhhhccccccccccccccccccccccchhhhccccccccccccccc
Confidence 9999999999999999999999999999999999999999988999999999999999999999988 56788899999
Q ss_pred cceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEE
Q psy5911 397 PLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVS 476 (1242)
Q Consensus 397 ~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~ 476 (1242)
|++|||+..++.+.+++++|+++|+..+..|++..++|+.+.|.+|+|++....+|..||++.|.++++.+.|.++|+|+
T Consensus 393 ~~~~~i~~~~~~~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~ 472 (602)
T PF00012_consen 393 PFSIGIEVSNGKFSKIIPKNTPIPSKKSKSFKTVTDNQTSISIDIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVT 472 (602)
T ss_dssp SSEEEEEETTTEEEEEESTTEBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEE
T ss_pred cccccccccccccccccccccccccccccccchhccccccccceeeeccccccccccccccccccccccccccccceeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 477 FDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 477 ~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|++|.||+|+|++.+..++.+..+.+.....+++++++++.++.+++...|+..++..+.+|+++.++
T Consensus 473 f~ld~~Gil~V~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~kn~lE~~i 540 (602)
T PF00012_consen 473 FELDENGILSVEAAEVETGKEEEVTVKKKETLSKEEIEELKKKLEEMDEEDEERRERAEAKNELESYI 540 (602)
T ss_dssp EEEETTSEEEEEEEETTTTEEEEEEEESSSSSCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeeehhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhhccccHHHHHHHH
Confidence 99999999999999999999999999877779999999999999999999999999999999997665
No 35
>KOG0103|consensus
Probab=100.00 E-value=4.9e-78 Score=679.26 Aligned_cols=579 Identities=32% Similarity=0.502 Sum_probs=529.0
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|+|+|..+|+++|.+.|..++|.|+.++|.+|++|+|.++ .+++|.+|..+..+|+.|++..+||++|+.|+||.+|
T Consensus 3 vvG~D~Gn~nc~iavAr~~gIe~i~nd~Snr~TPa~vsfg~K-~R~~G~aak~~~~~n~kntv~~~KRl~Gr~f~dP~~q 81 (727)
T KOG0103|consen 3 VVGFDLGNENCYIAVARQGGIEVVANDYSNRETPAIVSFGPK-NRFIGVAAKNQQTTNVKNTVSNFKRLIGRKFSDPEVQ 81 (727)
T ss_pred ceeeeccccceeeeeeccCCceeeeeccccccCcceeeeccc-cceeeeccccceeecccccchhhhhhhccccCChHhh
Confidence 789999999999999999999999999999999999999987 6889999999999999999999999999999999999
Q ss_pred hhcccCceEEEEcCCCCeEEEEc----CeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEVK----DQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
...+.+|+.++..++|.+.+.++ .+.++|+++++|+|.+|+..++..+..++.+|||+||+||++.||+++.+||+
T Consensus 82 ~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~Am~l~klk~~ae~~l~~~v~DcvIavP~~FTd~qRravldAA~ 161 (727)
T KOG0103|consen 82 REIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVLAMLLTKLKATAEKNLKSPVSDCVIAVPSYFTDSQRRAVLDAAR 161 (727)
T ss_pred hcccccchheeecCCCCcceeehcccCCCCCChHHHHHHHHHHHHHHHHHhcCCCCCCeeEeccccccHHHHHHHHhHHh
Confidence 99999999999999999999886 36899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCC------CCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKK------PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFD 874 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~------~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D 874 (1242)
+|||+++++++|.+|+|++||..+. .++++++++|+|.+++.+|++.+.. +.++++++.+|.++||++||
T Consensus 162 iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v~fvD~GHS~~q~si~aF~k----G~lkvl~ta~D~~lGgr~fD 237 (727)
T KOG0103|consen 162 IAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNVVFVDIGHSSYQVSIAAFTK----GKLKVLATAFDRKLGGRDFD 237 (727)
T ss_pred hcCccceeeeecchHhHhhcccccccCCCcccCcceEEEEecccccceeeeeeecc----CcceeeeeecccccccchHH
Confidence 9999999999999999999999764 2468899999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHH
Q psy5911 875 MRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLI 954 (1242)
Q Consensus 875 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~ 954 (1242)
+.|.+|+..+|+.+++++...++++..||+..||+.|+.||.+...+.++++++.+.+ .+..|+|++||+++.|++
T Consensus 238 e~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN~~~plNIEcfM~d~d----vs~~i~ReEfEel~~plL 313 (727)
T KOG0103|consen 238 EALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSANTELPLNIECFMNDKD----VSSKIKREEFEELSAPLL 313 (727)
T ss_pred HHHHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHhhcCcCCCcchhheeecch----hhhhccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999889999999998754 778999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcc--cccceEE
Q psy5911 955 SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG--VVKDVLL 1032 (1242)
Q Consensus 955 ~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~--~~~~~~~ 1032 (1242)
+++..++.++|.++++...||+.|.+|||+||+|.|+++|.++||++..+++|.++|||+|||+++|++|+ .++++.+
T Consensus 314 ~rv~~p~~~~l~d~~l~~edi~~VEiVGg~sripaike~Is~~Fgke~s~TlN~dEavarG~ALqcAIlSP~frVRef~v 393 (727)
T KOG0103|consen 314 ERVEVPLLKALADAKLKVEDIHAVEIVGGLSRIPAIKEMISDFFGKELSRTLNQDEAVARGAALQCAILSPTFRVREFSV 393 (727)
T ss_pred HhhhHHHHHHHHHhcCccccceeEEEecCcccchHHHHHHHHHhCCcccccccHHHHHHHhHHHHHHhcCccccceecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997 5778999
Q ss_pred eecccceeeEEEe----C-ceEEEEecCCCCcccceEEEeeeccCCCceEEEEeeccc-ccccccCcceeeEEecCCCCC
Q psy5911 1033 LDVTPLTLGIETM----G-GVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGE-RKKASQNKSLGKFDLNDISPA 1106 (1242)
Q Consensus 1033 ~~~~~~~~gi~~~----~-~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~-~~~~~~n~~lg~~~l~~~~~~ 1106 (1242)
.|+.|++|.+.+. + +....+||+|.++|..+..+|....+ +.+.++++. ...+.....|+++++.++.+.
T Consensus 394 ~Di~pysIs~~w~~~~ed~~~~~evF~~~~~~p~~K~lT~~Rk~~----F~lea~yt~~~~lp~~~~kI~~~~i~~v~~~ 469 (727)
T KOG0103|consen 394 EDIVPYSISLRWVKQGEDGGSVTEVFPKGHPSPSVKLLTFNRKGP----FTLEAKYTKVNKLPYPKPKIEKWTITGVTPS 469 (727)
T ss_pred ecccceeEEEEeccccccCCCceeeecCCCCCCCceEEEEEecCc----eEEEEEeccccccCCCCCceeeEEecccccC
Confidence 9999999998864 2 45577999999999999999988764 556655554 555556678999999999987
Q ss_pred CCC-cCEEEEEEEEcCCeeEEEEEEec----------------------------CCCc----eEEEEEc--cCCCCCHH
Q psy5911 1107 PRG-VPQIEVSFDLDANGILNVTAKDK----------------------------KTGK----EQSIIIK--SSGGLSEI 1151 (1242)
Q Consensus 1107 ~~g-~~~i~v~~~~d~~g~l~v~~~~~----------------------------~~~~----~~~~~i~--~~~~l~~~ 1151 (1242)
..| ..+++|.++++.+|+++|..... ..++ ...+.+. ..++++..
T Consensus 470 ~~ge~skVKvkvr~n~~Gi~~i~sA~~~e~~~veev~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l~~~ 549 (727)
T KOG0103|consen 470 EDGEFSKVKVKVRLNEHGIDTIESATLIEDIEVEEVPEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGALITD 549 (727)
T ss_pred ccccccceeEEEEEcCccceeeecceeecccchhccccchhhhhcchhhhhhhccccccceeeeccccceeeeccccCHH
Confidence 774 56799999999999999874210 0111 1112222 22469999
Q ss_pred HHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcC----CHHHHH
Q psy5911 1152 EIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKD-ENTKITDEEKESIEKSISNLELLIKGD----DIELIK 1226 (1242)
Q Consensus 1152 e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~wl~~~----~~~~~~ 1226 (1242)
+++..++.+.+|..+|+...++.+++|.||+|+|.||++|.+ |.+++++++++++...|+++++|||++ ....|.
T Consensus 550 ~l~~~~e~E~~M~~qD~~~~Et~D~KNaleeyVY~~R~kl~~~y~~f~~~a~~e~~~~~l~~~E~wlyedGed~~k~~Y~ 629 (727)
T KOG0103|consen 550 ELELYIEKENKMILQDKLEKETVDAKNALEEYVYDMRDKLSDKYEDFITDAEREKLKKMLTDTEEWLYEDGEDQTKAVYV 629 (727)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhccHHHHHHHHHHHHHHHhhhhhhhhcCHHHHHHHHHHHHHHHHHHHhcCcccchHHHH
Confidence 999999999999999999999999999999999999999964 888999999999999999999999976 478999
Q ss_pred HHHHHHHHHH
Q psy5911 1227 KGNEDLLKIS 1236 (1242)
Q Consensus 1227 ~~~~~l~~~~ 1236 (1242)
.|+.+|+...
T Consensus 630 ~kl~elk~~g 639 (727)
T KOG0103|consen 630 AKLEELKKLG 639 (727)
T ss_pred HHHHHHHhhh
Confidence 9999998765
No 36
>KOG0103|consensus
Probab=100.00 E-value=3.6e-71 Score=623.74 Aligned_cols=529 Identities=33% Similarity=0.517 Sum_probs=484.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+ |+|||||..+|.+|+.+.+..++|.|+.++|.||++|+|.++ .+++|.+|..+..+|+.|++..+||++|+.|+||
T Consensus 1 ms-vvG~D~Gn~nc~iavAr~~gIe~i~nd~Snr~TPa~vsfg~K-~R~~G~aak~~~~~n~kntv~~~KRl~Gr~f~dP 78 (727)
T KOG0103|consen 1 MS-VVGFDLGNENCYIAVARQGGIEVVANDYSNRETPAIVSFGPK-NRFIGVAAKNQQTTNVKNTVSNFKRLIGRKFSDP 78 (727)
T ss_pred CC-ceeeeccccceeeeeeccCCceeeeeccccccCcceeeeccc-cceeeeccccceeecccccchhhhhhhccccCCh
Confidence 56 999999999999999999999999999999999999999976 6789999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEc----CeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVK----DKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
.+|...+.+|+.++...++.+.+.++ .+.++|++|.+|+|.+|+..++..+..++.+|||+||+||++.||+++.+
T Consensus 79 ~~q~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~Am~l~klk~~ae~~l~~~v~DcvIavP~~FTd~qRravld 158 (727)
T KOG0103|consen 79 EVQREIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVLAMLLTKLKATAEKNLKSPVSDCVIAVPSYFTDSQRRAVLD 158 (727)
T ss_pred HhhhcccccchheeecCCCCcceeehcccCCCCCChHHHHHHHHHHHHHHHHHhcCCCCCCeeEeccccccHHHHHHHHh
Confidence 99999999999999999999998885 36899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCC------CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKK------PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGE 231 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~------~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 231 (1242)
||++|||+++++++|.+|+|++||..+. .++++++++|+|.+++.+|++.+.. +.+.++++.+|.++||+
T Consensus 159 AA~iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v~fvD~GHS~~q~si~aF~k----G~lkvl~ta~D~~lGgr 234 (727)
T KOG0103|consen 159 AARIAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNVVFVDIGHSSYQVSIAAFTK----GKLKVLATAFDRKLGGR 234 (727)
T ss_pred HHhhcCccceeeeecchHhHhhcccccccCCCcccCcceEEEEecccccceeeeeeecc----Ccceeeeeecccccccc
Confidence 9999999999999999999999998764 2468899999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHH
Q psy5911 232 DFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVE 311 (1242)
Q Consensus 232 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~ 311 (1242)
+||+.|.+|+..+|+.++++|+..++++..||+..||++|+.||++...+.++++++.+ .+.+..|+|++||+++.
T Consensus 235 ~fDe~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN~~~plNIEcfM~d----~dvs~~i~ReEfEel~~ 310 (727)
T KOG0103|consen 235 DFDEALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSANTELPLNIECFMND----KDVSSKIKREEFEELSA 310 (727)
T ss_pred hHHHHHHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHhhcCcCCCcchhheeec----chhhhhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998899999999987 46788999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC--Cccc
Q psy5911 312 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG--VVKD 389 (1242)
Q Consensus 312 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~--~~~~ 389 (1242)
|+++++..++.++|+++++..++|+.|.+|||+||||.|++.|+++||+++.+++|.++|||+|||+++|++|+ ++++
T Consensus 311 plL~rv~~p~~~~l~d~~l~~edi~~VEiVGg~sripaike~Is~~Fgke~s~TlN~dEavarG~ALqcAIlSP~frVRe 390 (727)
T KOG0103|consen 311 PLLERVEVPLLKALADAKLKVEDIHAVEIVGGLSRIPAIKEMISDFFGKELSRTLNQDEAVARGAALQCAILSPTFRVRE 390 (727)
T ss_pred HHHHhhhHHHHHHHHHhcCccccceeEEEecCcccchHHHHHHHHHhCCcccccccHHHHHHHhHHHHHHhcCcccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997 6788
Q ss_pred eEEEeeccceeEEEee----C-CeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecC-cccccCCcceeEEEecCC
Q psy5911 390 VLLLDVTPLTLGIETM----G-GVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGE-RKKASQNKSLGKFDLNDI 463 (1242)
Q Consensus 390 ~~~~d~~~~sigi~~~----~-~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~-~~~~~~~~~lg~~~i~~~ 463 (1242)
+.+.|+.|++|.+.+. + +....+||+|.++|..+..+|.... .|.+.++++. ...+.....|+++++.++
T Consensus 391 f~v~Di~pysIs~~w~~~~ed~~~~~evF~~~~~~p~~K~lT~~Rk~----~F~lea~yt~~~~lp~~~~kI~~~~i~~v 466 (727)
T KOG0103|consen 391 FSVEDIVPYSISLRWVKQGEDGGSVTEVFPKGHPSPSVKLLTFNRKG----PFTLEAKYTKVNKLPYPKPKIEKWTITGV 466 (727)
T ss_pred cceecccceeEEEEeccccccCCCceeeecCCCCCCCceEEEEEecC----ceEEEEEeccccccCCCCCceeeEEeccc
Confidence 9999999999999865 2 4557899999999999999998876 4888888776 444556689999999999
Q ss_pred CCCCC-CcCEEEEEEEecCCeeEEEEEEEc----------------------------CCC----cEEEEEEe-c-CCCC
Q psy5911 464 SPAPR-GVPQIEVSFDLDANGILNVTAKDK----------------------------KTG----KEQSIIIK-S-SGGL 508 (1242)
Q Consensus 464 ~~~~~-g~~~i~v~~~~d~~g~l~v~~~~~----------------------------~~~----~~~~~~i~-~-~~~l 508 (1242)
.+... ...+++|..+++.+|+.+|.-... ..+ +...+.+. + .++|
T Consensus 467 ~~~~~ge~skVKvkvr~n~~Gi~~i~sA~~~e~~~veev~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l 546 (727)
T KOG0103|consen 467 TPSEDGEFSKVKVKVRLNEHGIDTIESATLIEDIEVEEVPEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGAL 546 (727)
T ss_pred ccCccccccceeEEEEEcCccceeeecceeecccchhccccchhhhhcchhhhhhhccccccceeeeccccceeeecccc
Confidence 98777 456899999999999999874211 111 11223333 2 2469
Q ss_pred chHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 509 SEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 509 ~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
...+++..++.+-+|..+|...++..+++|.++++.
T Consensus 547 ~~~~l~~~~e~E~~M~~qD~~~~Et~D~KNaleeyV 582 (727)
T KOG0103|consen 547 ITDELELYIEKENKMILQDKLEKETVDAKNALEEYV 582 (727)
T ss_pred CHHHHHHHHHHHHHhhhhhhhhhhhccHHHHHHHHH
Confidence 999999999999999999999999999999998773
No 37
>KOG0104|consensus
Probab=100.00 E-value=5.3e-64 Score=564.94 Aligned_cols=585 Identities=28% Similarity=0.412 Sum_probs=502.6
Q ss_pred cccccCCceEEEEEEEeCCcc-eEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKP-QVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~-~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
+.++|+|+.+..++++.+|-| +++.|..++|++|++|+|.+ |+|++|.+|.....++|++++..++.|+|+...++.+
T Consensus 24 vmsVDlGse~~Kv~vVkPGvPmeIvLn~esrRKtp~~vafk~-~eR~fg~~A~~ma~r~P~~~~~~l~~llgk~~~~~~v 102 (902)
T KOG0104|consen 24 VMSVDLGSEWIKVAVVKPGVPMEIVLNKESRRKTPSIVAFKG-GERIFGEAAASMATRFPQSTYRQLKDLLGKSLDDPTV 102 (902)
T ss_pred heeeecccceeEEEEecCCCCeEEeechhhcccCcceEEecC-CceehhhhhhhhhhcCcHHHHHHHHHHhCcccCCcHH
Confidence 458999999999999999976 78889999999999999975 5899999999999999999999999999999999999
Q ss_pred HhhcccCceEEE-EcC-CCCeEEEEcC-eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 724 QKDIKMVPYKIV-AAD-NGDAWVEVKD-QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 724 ~~~~~~~~~~~~-~~~-~~~~~~~~~~-~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
....+++|+.-. .++ .+.+.+.+.+ ..|++|+++||+|.+.+..|+.+...++.++|||||.||++.||+++.+||+
T Consensus 103 ~ly~~~~p~~e~v~d~~rstV~F~i~d~~~ysvEellAMil~~a~~~ae~~a~~~Ikd~ViTVP~~F~qaeR~all~Aa~ 182 (902)
T KOG0104|consen 103 DLYQKRFPFFELVEDPQRSTVVFKISDQEEYSVEELLAMILQYAKSLAEEYAKQPIKDMVITVPPFFNQAERRALLQAAQ 182 (902)
T ss_pred HHHHhcCCceeecccCccceEEEEeCCccccCHHHHHHHHHHHHHHHHHHHHhcchhheEEeCCcccCHHHHHHHHHHHH
Confidence 999888887655 443 4567778877 7899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCC----CCCcEEEEEeeCCCceEEEEEEEeecC------CCceEEEEEecCCCCCCc
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKK----PDDRIIVVYDLGGGTFDISVIEIANVD------GETQFEVLSTNGDTFLGG 870 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~----~~~~~vlV~D~GggT~dvsi~~~~~~~------~~~~~~v~~~~~~~~lGG 870 (1242)
+||++++.||||-+|||+.|+..+. ..+++++|||||+|++.++++.+.-.. ....+++++.++|..|||
T Consensus 183 iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvGfd~tLGG 262 (902)
T KOG0104|consen 183 IAGLNVLQLINDGTAVALNYGVFRRKEINETPQHYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVGFDRTLGG 262 (902)
T ss_pred hcCchhhhhhccchHHHhhhhhhccccCCCCceEEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeeccCCccch
Confidence 9999999999999999999999863 467899999999999999999985321 225899999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhcCC--CCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHH
Q psy5911 871 EDFDMRIINHLIYEFKIENGV--DLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLES 948 (1242)
Q Consensus 871 ~~~D~~l~~~l~~~~~~~~~~--~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~ 948 (1242)
..|..+|.+|+.+.|...++. ++..+++++.+|.++|+++|..||.+..+.+.++.+.++.| |+.+|||++||+
T Consensus 263 ~e~~~rLr~~l~~~F~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANsea~aqIEsL~ddiD----Fr~kvTRe~fEe 338 (902)
T KOG0104|consen 263 LEMTMRLRDHLANEFNEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANSEAFAQIESLIDDID----FRLKVTREEFEE 338 (902)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhccc----cccceeHHHHHH
Confidence 999999999999999988763 57889999999999999999999999999999999988754 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc-ccccccCCcchhhhhhHHHhhhhhcc--
Q psy5911 949 LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSG-- 1025 (1242)
Q Consensus 949 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~v~~~~~p~~aVa~GAa~~a~~l~~-- 1025 (1242)
+|.++..++..+|.++|..++++.++|+.|+|.||+||+|.||+.|.++.| .++...+|.|||++.||+++||.||.
T Consensus 339 lc~Dl~~r~~~Pi~dAl~~a~l~ldeIn~ViL~Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSksF 418 (902)
T KOG0104|consen 339 LCADLEERIVEPINDALKKAQLSLDEINQVILFGGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSKSF 418 (902)
T ss_pred HHHHHHHhhhhhHHHHHHhcCCChhhhheeEEecCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999997 47889999999999999999999997
Q ss_pred cccceEEeecccceeeEEEeCc--------eEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceee
Q psy5911 1026 VVKDVLLLDVTPLTLGIETMGG--------VMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGK 1097 (1242)
Q Consensus 1026 ~~~~~~~~~~~~~~~gi~~~~~--------~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~ 1097 (1242)
.++++.+.|.++++|-++..+. .-..+|++|.++|.++..+|+...|+ +.+.+-.|.-. ..+-.
T Consensus 419 KvKpf~V~D~~~yp~~v~f~~~~~i~~~k~~~~~lf~~~~~yPnk~vi~~~~ysdd---f~~~~n~~~~~-----~nl~~ 490 (902)
T KOG0104|consen 419 KVKPFNVVDASVYPYLVEFETEPGIHALKSVKRDLFARMSPYPNKKVITFTSYSDD---FPFNINYGDLG-----QNLTT 490 (902)
T ss_pred cccceeeeecccccEEEEeccCCcccccchhHHHHHhcCCcCCCcceeeccccCCc---cccccchhhhc-----cCccE
Confidence 4678999999999988875543 22348999999999987788766552 33332222110 22446
Q ss_pred EEecCCCC----CCC---CcCEEEEEEEEcCCeeEEEEEEec------------------C---C---------------
Q psy5911 1098 FDLNDISP----APR---GVPQIEVSFDLDANGILNVTAKDK------------------K---T--------------- 1134 (1242)
Q Consensus 1098 ~~l~~~~~----~~~---g~~~i~v~~~~d~~g~l~v~~~~~------------------~---~--------------- 1134 (1242)
+++.++.. .+. ....|+++|.+|..|++.|+..+. + |
T Consensus 491 velsgV~d~~kk~~~~~~~~KGIk~~F~~D~Sgi~~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~~~~e~ 570 (902)
T KOG0104|consen 491 VELSGVKDALKKNSYSDSESKGIKASFSLDLSGIVLVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDSVQEED 570 (902)
T ss_pred EEEecchHHHHhcccchhhccCceEEEEEcCcCceEEeeeeEEEeccCCcccchhhhhhhccccccccccccccccchhh
Confidence 77776652 121 133589999999999999886421 0 0
Q ss_pred --------Cc--e------------------------------------EEEEEccC----CCCCHHHHHHHHHHHHhhh
Q psy5911 1135 --------GK--E------------------------------------QSIIIKSS----GGLSEIEIENMIKDAELNS 1164 (1242)
Q Consensus 1135 --------~~--~------------------------------------~~~~i~~~----~~l~~~e~~~~~~~~~~~~ 1164 (1242)
++ + +.+.|... ..|++..++.....++.+.
T Consensus 571 ae~k~~ep~e~se~~ee~~~d~s~e~k~e~~t~e~~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~kl~d~~ 650 (902)
T KOG0104|consen 571 AEEKGLEPSERSELEEEAEEDASQEDKTEKETSEAQKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAKLEDFV 650 (902)
T ss_pred hhhhccCccccccccccccccccccccccccchhccCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHHHHHHH
Confidence 00 0 01334332 2488899999999999999
Q ss_pred HhhHhhHHHHHhhhhHHHHHHHHHHhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHH
Q psy5911 1165 ELDKKFEELVKCKNEADSTISIVKKNLKD--ENTKITDEEKESIEKSISNLELLIKGD----DIELIKKGNEDLLKISEN 1238 (1242)
Q Consensus 1165 ~~d~~~~~~~~~~n~le~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~wl~~~----~~~~~~~~~~~l~~~~~~ 1238 (1242)
+.|+...++.++.|+||.|+|.+...|.+ |..+.+++++..|...+..+.+||+++ ..+.+.+++.+|++.+..
T Consensus 651 ~~e~~k~~re~a~N~LE~~l~e~q~~l~d~ey~e~at~EEk~~L~~~~~~~~~Wleed~~~~~t~~~~ek~a~L~~l~~~ 730 (902)
T KOG0104|consen 651 QKEKEKSEREEASNELEAFLFELQDKLDDDEYAEVATEEEKKILKKKVSLLMDWLEEDGSQTPTEMLTEKLAELKKLETS 730 (902)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHhcCchHhhhcCHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999954 678999999999999999999999976 367899999999998877
Q ss_pred HhhC
Q psy5911 1239 IIKK 1242 (1242)
Q Consensus 1239 ~~~~ 1242 (1242)
+..|
T Consensus 731 ~~~R 734 (902)
T KOG0104|consen 731 KNFR 734 (902)
T ss_pred hhHH
Confidence 6543
No 38
>KOG0104|consensus
Probab=100.00 E-value=3.4e-60 Score=534.28 Aligned_cols=476 Identities=30% Similarity=0.470 Sum_probs=419.8
Q ss_pred CeEEEEEcCccceEEEEEECCeE-EEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKP-QVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~-~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
.+|++||+||.++.||++..|-| +|+.|..++|++|++|+|.+ +++++|.+|.....++|++++..++.++|+...++
T Consensus 22 ~AvmsVDlGse~~Kv~vVkPGvPmeIvLn~esrRKtp~~vafk~-~eR~fg~~A~~ma~r~P~~~~~~l~~llgk~~~~~ 100 (902)
T KOG0104|consen 22 LAVMSVDLGSEWIKVAVVKPGVPMEIVLNKESRRKTPSIVAFKG-GERIFGEAAASMATRFPQSTYRQLKDLLGKSLDDP 100 (902)
T ss_pred hhheeeecccceeEEEEecCCCCeEEeechhhcccCcceEEecC-CceehhhhhhhhhhcCcHHHHHHHHHHhCcccCCc
Confidence 47999999999999999999976 78889999999999999985 58999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecC--CCCeEEEEcC-eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAAD--NGDAWVEVKD-KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA 158 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~A 158 (1242)
.++.+.+.+||.-+..+ .+.+.|.+.+ ..|++++++||+|.+.+..|+.+...++.++|||||.||++.||+++.+|
T Consensus 101 ~v~ly~~~~p~~e~v~d~~rstV~F~i~d~~~ysvEellAMil~~a~~~ae~~a~~~Ikd~ViTVP~~F~qaeR~all~A 180 (902)
T KOG0104|consen 101 TVDLYQKRFPFFELVEDPQRSTVVFKISDQEEYSVEELLAMILQYAKSLAEEYAKQPIKDMVITVPPFFNQAERRALLQA 180 (902)
T ss_pred HHHHHHhcCCceeecccCccceEEEEeCCccccCHHHHHHHHHHHHHHHHHHHHhcchhheEEeCCcccCHHHHHHHHHH
Confidence 99999998887655433 5678888887 88999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeeeeechHHHHHHHhccCCC----CCCcEEEEEEeCCcceeeeEEEEEeec------CCceEEEEEecCCCCc
Q psy5911 159 GKIAGLEVLRIINEPTAAALAYGLDKK----PDDRIIVVYDLGGGTFDISVIEIANVD------GETQFEVLSTNGDTFL 228 (1242)
Q Consensus 159 a~~AGl~~~~li~Ep~AAal~y~~~~~----~~~~~vlV~D~GggT~Dvsv~~~~~~~------~~~~~~v~~~~~~~~l 228 (1242)
|++||++++.|||+-+|||+.|+..+. ..+++++|||+|+|++.++++.+.-.. ....+++++.++|..|
T Consensus 181 a~iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvGfd~tL 260 (902)
T KOG0104|consen 181 AQIAGLNVLQLINDGTAVALNYGVFRRKEINETPQHYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVGFDRTL 260 (902)
T ss_pred HHhcCchhhhhhccchHHHhhhhhhccccCCCCceEEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeeccCCcc
Confidence 999999999999999999999999863 468899999999999999999985432 2367999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHH
Q psy5911 229 GGEDFDMRIINHLIYEFKIENG--VDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKL 306 (1242)
Q Consensus 229 GG~~iD~~l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~f 306 (1242)
||..|..+|.+|+.+.|.+.++ .++..+++++.+|.++|+++|..||.+..+.+.++.+.++ .+|..+|||++|
T Consensus 261 GG~e~~~rLr~~l~~~F~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANsea~aqIEsL~dd----iDFr~kvTRe~f 336 (902)
T KOG0104|consen 261 GGLEMTMRLRDHLANEFNEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANSEAFAQIESLIDD----IDFRLKVTREEF 336 (902)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhc----cccccceeHHHH
Confidence 9999999999999999998876 4678899999999999999999999999999999999887 579999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc-cccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 307 ESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 307 e~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
|++|.++..++..+|+++|..++++..+|+.|+|.||+||+|.||+.|.++.| .++...+|.|||++.||+++||.||.
T Consensus 337 Eelc~Dl~~r~~~Pi~dAl~~a~l~ldeIn~ViL~Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSk 416 (902)
T KOG0104|consen 337 EELCADLEERIVEPINDALKKAQLSLDEINQVILFGGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSK 416 (902)
T ss_pred HHHHHHHHHhhhhhHHHHHHhcCCChhhhheeEEecCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999997 46889999999999999999999998
Q ss_pred --CccceEEEeeccceeEEEeeCC--------eeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcce
Q psy5911 386 --VVKDVLLLDVTPLTLGIETMGG--------VMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSL 455 (1242)
Q Consensus 386 --~~~~~~~~d~~~~sigi~~~~~--------~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~l 455 (1242)
+++++.+.|.++++|-++..+. ....+|++|.++|.++..+|+.+.|+ |.+.+-.|.-. .-+
T Consensus 417 sFKvKpf~V~D~~~yp~~v~f~~~~~i~~~k~~~~~lf~~~~~yPnk~vi~~~~ysdd---f~~~~n~~~~~-----~nl 488 (902)
T KOG0104|consen 417 SFKVKPFNVVDASVYPYLVEFETEPGIHALKSVKRDLFARMSPYPNKKVITFTSYSDD---FPFNINYGDLG-----QNL 488 (902)
T ss_pred cccccceeeeecccccEEEEeccCCcccccchhHHHHHhcCCcCCCcceeeccccCCc---cccccchhhhc-----cCc
Confidence 5678999999999988876543 22358999999999988888766553 44444333211 224
Q ss_pred eEEEecCCCCCC----C---CcCEEEEEEEecCCeeEEEEEEE
Q psy5911 456 GKFDLNDISPAP----R---GVPQIEVSFDLDANGILNVTAKD 491 (1242)
Q Consensus 456 g~~~i~~~~~~~----~---g~~~i~v~~~~d~~g~l~v~~~~ 491 (1242)
-.|++.++...- . ....|+++|.+|.+|++.|+..+
T Consensus 489 ~~velsgV~d~~kk~~~~~~~~KGIk~~F~~D~Sgi~~v~~~e 531 (902)
T KOG0104|consen 489 TTVELSGVKDALKKNSYSDSESKGIKASFSLDLSGIVLVSRVE 531 (902)
T ss_pred cEEEEecchHHHHhcccchhhccCceEEEEEcCcCceEEeeee
Confidence 477887776321 1 12359999999999999988653
No 39
>PRK11678 putative chaperone; Provisional
Probab=100.00 E-value=3.1e-53 Score=494.33 Aligned_cols=342 Identities=27% Similarity=0.429 Sum_probs=291.2
Q ss_pred EEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEe----------------------------------------
Q psy5911 5 IIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYT---------------------------------------- 44 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~---------------------------------------- 44 (1242)
++|||||||||++|++++|.++++++..|.+.+||+|+|.
T Consensus 2 ~iGID~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T PRK11678 2 FIGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDV 81 (450)
T ss_pred eEEEecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccc
Confidence 6999999999999999999999999999999999999995
Q ss_pred cCCcEEEcHHHHHhhhhCCCch--hhhchhhhCCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHH
Q psy5911 45 EDNRIIVGLPAKRQAITNPNNT--LYAIKRLIGRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILK 122 (1242)
Q Consensus 45 ~~~~~~vG~~A~~~~~~~~~~~--~~~~k~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~ 122 (1242)
+++.+++|..|+.++..+|.++ +.++||+||.....+ +....++++++++|+
T Consensus 82 ~~~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~--------------------------~~~~~~e~l~a~iL~ 135 (450)
T PRK11678 82 TAQSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKP--------------------------QQVALFEDLVCAMML 135 (450)
T ss_pred cccccchhHHHHHhhccCCCCceEEecchhhhccCCCCc--------------------------cceeCHHHHHHHHHH
Confidence 3457889999999999999988 679999999752110 122348999999999
Q ss_pred HHHHHHHhHhcCCCCcEEEEecCCCC-----HHHHHH---HHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEE
Q psy5911 123 KMKSTAETFLNEKIEKAVITVPAYFN-----DSQRQA---TKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVY 194 (1242)
Q Consensus 123 ~l~~~a~~~~~~~~~~~vitVPa~f~-----~~qr~~---~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~ 194 (1242)
+|++.++.+++.++.++|||||++|+ +.||++ +++||+.||++++++++||+|||++|+.... .++.+|||
T Consensus 136 ~lk~~ae~~~g~~v~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~~-~~~~vlV~ 214 (450)
T PRK11678 136 HIKQQAEAQLQAAITQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATLT-EEKRVLVV 214 (450)
T ss_pred HHHHHHHHHhCCCCCcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhccccC-CCCeEEEE
Confidence 99999999999999999999999998 788776 6999999999999999999999999987543 67889999
Q ss_pred EeCCcceeeeEEEEEeec---CCceEEEEEecCCCCcchHHHHHHHH-HHHHHHHHH----hcCCCC-------------
Q psy5911 195 DLGGGTFDISVIEIANVD---GETQFEVLSTNGDTFLGGEDFDMRII-NHLIYEFKI----ENGVDL------------- 253 (1242)
Q Consensus 195 D~GggT~Dvsv~~~~~~~---~~~~~~v~~~~~~~~lGG~~iD~~l~-~~l~~~~~~----~~~~~~------------- 253 (1242)
||||||+|+|++++.... .....+++++.| .++||+|||..|+ +++...|.. +.+.++
T Consensus 215 D~GGGT~D~Svv~~~~~~~~~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~~~~~~~~~~~ 293 (450)
T PRK11678 215 DIGGGTTDCSMLLMGPSWRGRADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSLPFWNAVAIND 293 (450)
T ss_pred EeCCCeEEEEEEEecCcccccCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHhhhchhhccCCcCcchhhhhhhhhhc
Confidence 999999999999986421 123578999998 5799999999998 677777742 111110
Q ss_pred ----------------------CCCHHHH------------HHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEE
Q psy5911 254 ----------------------SGDSLAM------------QRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNV 299 (1242)
Q Consensus 254 ----------------------~~~~~~~------------~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~ 299 (1242)
..++..+ .+|+.+||++|+.||..+++.+.++.+.. ++..
T Consensus 294 i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~~------~~~~ 367 (450)
T PRK11678 294 VPAQSDFYSLANGRLLNDLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFISD------GLAT 367 (450)
T ss_pred cchhhhhhhhhhHHHHHHHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccCC------Ccce
Confidence 0123223 36889999999999999999998876542 3678
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
.|||++|+++++|+++++..+++++|+++++. ++.|+||||+|++|.|++.+++.||.......+|.++||.|+|++
T Consensus 368 ~ItR~efe~ii~~~l~ri~~~i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v~~g~~~~sVa~Gla~~ 444 (450)
T PRK11678 368 EISQQGLEEAISQPLARILELVQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPIVGGDDFGSVTAGLARW 444 (450)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcEEeCCCcchHHHHHHHH
Confidence 99999999999999999999999999999975 579999999999999999999999876667889999999999999
Q ss_pred hhhh
Q psy5911 380 AGVL 383 (1242)
Q Consensus 380 a~~l 383 (1242)
|..+
T Consensus 445 a~~~ 448 (450)
T PRK11678 445 AQVV 448 (450)
T ss_pred HHhh
Confidence 8754
No 40
>PRK11678 putative chaperone; Provisional
Probab=100.00 E-value=4.4e-50 Score=467.84 Aligned_cols=342 Identities=26% Similarity=0.412 Sum_probs=290.6
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEe----------------------------------------
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYT---------------------------------------- 684 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~---------------------------------------- 684 (1242)
.+|||+||+||+++++++|+++++++..|.+.+||+|+|.
T Consensus 2 ~iGID~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T PRK11678 2 FIGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDV 81 (450)
T ss_pred eEEEecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccc
Confidence 5799999999999999999999999999999999999994
Q ss_pred cCCcEEEcHHHHHHhhhCCcch--hhHHHHhcCCCCCChhHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHH
Q psy5911 685 EDNRIIVGLPAKRQAITNPNNT--LYAIKRLIGRKYTDEIVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILK 762 (1242)
Q Consensus 685 ~~~~~~~G~~A~~~~~~~p~~~--~~~~krllg~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~ 762 (1242)
+++..++|..|+.++..+|..+ +.++||+||.....+ +....++++++++|+
T Consensus 82 ~~~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~--------------------------~~~~~~e~l~a~iL~ 135 (450)
T PRK11678 82 TAQSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKP--------------------------QQVALFEDLVCAMML 135 (450)
T ss_pred cccccchhHHHHHhhccCCCCceEEecchhhhccCCCCc--------------------------cceeCHHHHHHHHHH
Confidence 3457889999999999999998 669999999752110 112348999999999
Q ss_pred HHHHHHHhHhCCCCCcEEEEecCCCC-----HHHHHH---HHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEE
Q psy5911 763 KMKSTAETFLNEKIEKAVITVPAYFN-----DSQRQA---TKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVY 834 (1242)
Q Consensus 763 ~l~~~a~~~~~~~~~~~VitVPa~~~-----~~qr~~---~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~ 834 (1242)
+|++.++.+++.++.++|||||++|+ +.||++ +++||+.|||+++++++||+|||++|+.... .++.+|||
T Consensus 136 ~lk~~ae~~~g~~v~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~~-~~~~vlV~ 214 (450)
T PRK11678 136 HIKQQAEAQLQAAITQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATLT-EEKRVLVV 214 (450)
T ss_pred HHHHHHHHHhCCCCCcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhccccC-CCCeEEEE
Confidence 99999999999999999999999998 788776 6999999999999999999999999987554 57889999
Q ss_pred eeCCCceEEEEEEEeecC---CCceEEEEEecCCCCCCchHHHHHHH-HHHHHHhhhh----cCCCC-------------
Q psy5911 835 DLGGGTFDISVIEIANVD---GETQFEVLSTNGDTFLGGEDFDMRII-NHLIYEFKIE----NGVDL------------- 893 (1242)
Q Consensus 835 D~GggT~dvsi~~~~~~~---~~~~~~v~~~~~~~~lGG~~~D~~l~-~~l~~~~~~~----~~~~~------------- 893 (1242)
|+||||+|+|++++.... .....+++++.| .++||+|||..|+ +++...|+.. .+.++
T Consensus 215 D~GGGT~D~Svv~~~~~~~~~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~~~~~~~~~~~ 293 (450)
T PRK11678 215 DIGGGTTDCSMLLMGPSWRGRADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSLPFWNAVAIND 293 (450)
T ss_pred EeCCCeEEEEEEEecCcccccCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHhhhchhhccCCcCcchhhhhhhhhhc
Confidence 999999999999986421 123578999998 5799999999998 6787777521 11110
Q ss_pred ----------------------CCCHHHH------------HHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEE
Q psy5911 894 ----------------------SGDSLAM------------QRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNV 939 (1242)
Q Consensus 894 ----------------------~~~~~~~------------~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~ 939 (1242)
..++..+ .+|+.+||++|+.||..+++.+.++++.. ++..
T Consensus 294 i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~~------~~~~ 367 (450)
T PRK11678 294 VPAQSDFYSLANGRLLNDLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFISD------GLAT 367 (450)
T ss_pred cchhhhhhhhhhHHHHHHHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccCC------Ccce
Confidence 0123223 36889999999999999999998876532 3678
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 940 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 940 ~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
+|||++|+++++|+++++.++++++|+++++. ++.|+||||+|+||.|++.+++.||.......+|.++||.|+|++
T Consensus 368 ~ItR~efe~ii~~~l~ri~~~i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v~~g~~~~sVa~Gla~~ 444 (450)
T PRK11678 368 EISQQGLEEAISQPLARILELVQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPIVGGDDFGSVTAGLARW 444 (450)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcEEeCCCcchHHHHHHHH
Confidence 99999999999999999999999999999975 589999999999999999999999876666889999999999999
Q ss_pred hhhh
Q psy5911 1020 AGVL 1023 (1242)
Q Consensus 1020 a~~l 1023 (1242)
|..+
T Consensus 445 a~~~ 448 (450)
T PRK11678 445 AQVV 448 (450)
T ss_pred HHhh
Confidence 8754
No 41
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=100.00 E-value=4.7e-37 Score=352.70 Aligned_cols=313 Identities=27% Similarity=0.389 Sum_probs=242.8
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC-Cc-EEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-NR-IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~-~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
.-+||||||+||+++.. ++..++. .||+|+|..+ +. +.+|.+|+....+.|.+.... +
T Consensus 4 ~~~gIDlGt~~~~i~~~--~~~~v~~-------~psvv~~~~~~~~i~~vG~~A~~~~~~~p~~~~~~------~----- 63 (336)
T PRK13928 4 RDIGIDLGTANVLVYVK--GKGIVLN-------EPSVVAIDKNTNKVLAVGEEARRMVGRTPGNIVAI------R----- 63 (336)
T ss_pred ceeEEEcccccEEEEEC--CCCEEEc-------cCCEEEEECCCCeEEEecHHHHHhhhcCCCCEEEE------c-----
Confidence 34899999999999886 4444553 5999999954 23 479999988765655553321 0
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
| +.+..+...+++..+|+++.+.+..........+|||||++|+..||+++++|++.
T Consensus 64 ---------p--------------i~~G~i~d~~~~~~~l~~~~~~~~~~~~~~~p~~vitvP~~~~~~~r~~~~~a~~~ 120 (336)
T PRK13928 64 ---------P--------------LRDGVIADYDVTEKMLKYFINKACGKRFFSKPRIMICIPTGITSVEKRAVREAAEQ 120 (336)
T ss_pred ---------c--------------CCCCeEecHHHHHHHHHHHHHHHhccCCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 1 11233456678888888888665433223345799999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
||++++.+++||+|||++|+.+.. .+..++|||+||||||+++++... . ...++..+||++||+.|++++
T Consensus 121 ag~~~~~li~ep~Aaa~~~g~~~~-~~~~~lVvDiGggttdvsvv~~g~-----~----~~~~~~~lGG~did~~i~~~l 190 (336)
T PRK13928 121 AGAKKVYLIEEPLAAAIGAGLDIS-QPSGNMVVDIGGGTTDIAVLSLGG-----I----VTSSSIKVAGDKFDEAIIRYI 190 (336)
T ss_pred cCCCceEecccHHHHHHHcCCccc-CCCeEEEEEeCCCeEEEEEEEeCC-----E----EEeCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999998654 456689999999999999998643 1 134578899999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce----eeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ----TDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKS 317 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i 317 (1242)
..+|....+ ...||++|+.++.... ..+.+.. .+...+....++|+|++|++++.+.++++
T Consensus 191 ~~~~~~~~~-------------~~~ae~lK~~~~~~~~~~~~~~~~v~g--~~~~~~~~~~~~i~~~~~~eii~~~~~~i 255 (336)
T PRK13928 191 RKKYKLLIG-------------ERTAEEIKIKIGTAFPGAREEEMEIRG--RDLVTGLPKTITVTSEEIREALKEPVSAI 255 (336)
T ss_pred HHHhchhcC-------------HHHHHHHHHHhcccccccCCcEEEEec--ccccCCCceEEEECHHHHHHHHHHHHHHH
Confidence 977753221 3579999999875421 2222211 11112234578999999999999999999
Q ss_pred HHHHHHHHHHcC--CCcCCcc-eEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhc
Q psy5911 318 LKPCEVALNDAK--IDKSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 318 ~~~i~~~l~~~~--~~~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~ 384 (1242)
.+.+++.|+.++ +....++ .|+|+||+|++|.+++++++.|+.++....||+++||+|||+++..+.
T Consensus 256 ~~~i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~~~~~~v~~~~~P~~ava~Gaa~~~~~~~ 325 (336)
T PRK13928 256 VQAVKSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAEETKVPVYIAEDPISCVALGTGKMLENID 325 (336)
T ss_pred HHHHHHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHHHHCCCceecCCHHHHHHHHHHHHHhchH
Confidence 999999999986 3445677 799999999999999999999999999999999999999999987643
No 42
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=100.00 E-value=2e-36 Score=345.66 Aligned_cols=309 Identities=25% Similarity=0.370 Sum_probs=245.2
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCc--EEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNR--IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~--~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
..+||||||+||++ |.+++.. +.| .||+|+++.++. +.+|.+|+.+..++|.++... +-
T Consensus 5 ~~~giDlGt~~~~i--~~~~~~~-~~~------~ps~va~~~~~~~~~~vG~~A~~~~~~~p~~~~~~--~p-------- 65 (335)
T PRK13929 5 TEIGIDLGTANILV--YSKNKGI-ILN------EPSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAV--RP-------- 65 (335)
T ss_pred CeEEEEcccccEEE--EECCCcE-Eec------CCcEEEEECCCCeEEEeCHHHHHhhhcCCCcEEEE--ec--------
Confidence 46999999999985 5556554 444 499999986543 679999999888888775542 11
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCC--cEEEEecCCCCHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIE--KAVITVPAYFNDSQRQATKDAG 159 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~--~~vitVPa~f~~~qr~~~~~Aa 159 (1242)
+....+...++++.+|++++..++..++..+. .+|||||++|+..||+++.+|+
T Consensus 66 ------------------------i~~G~I~d~d~~~~~l~~~~~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~a~ 121 (335)
T PRK13929 66 ------------------------MKDGVIADYDMTTDLLKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISDAV 121 (335)
T ss_pred ------------------------CCCCccCCHHHHHHHHHHHHHHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHHHH
Confidence 11223445689999999999998888776554 7999999999999999999999
Q ss_pred HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHH
Q psy5911 160 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 239 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~ 239 (1242)
+.||++++.+++||+|||++|+.... .+..++|+|+||||+|++++.+.. . + ..++..+||++||+.|.+
T Consensus 122 ~~ag~~~~~li~ep~Aaa~~~g~~~~-~~~~~lvvDiG~gtt~v~vi~~~~-----~---~-~~~~~~~GG~~id~~l~~ 191 (335)
T PRK13929 122 KNCGAKNVHLIEEPVAAAIGADLPVD-EPVANVVVDIGGGTTEVAIISFGG-----V---V-SCHSIRIGGDQLDEDIVS 191 (335)
T ss_pred HHcCCCeeEeecCHHHHHHhcCCCcC-CCceEEEEEeCCCeEEEEEEEeCC-----E---E-EecCcCCHHHHHHHHHHH
Confidence 99999999999999999999987654 456789999999999999998653 1 1 345577999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc----eeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHH
Q psy5911 240 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE----QTDINLPYITADKNGPKHLNVKITRSKLESLVEDLIS 315 (1242)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~ 315 (1242)
++...+.. .. . ...||++|+.++... ...+.+... +...+....+.+++++|++++.+++.
T Consensus 192 ~l~~~~~~----~~--~-------~~~AE~iK~~l~~~~~~~~~~~~~v~g~--~~~~~~p~~i~i~~~~~~~~i~~~l~ 256 (335)
T PRK13929 192 FVRKKYNL----LI--G-------ERTAEQVKMEIGYALIEHEPETMEVRGR--DLVTGLPKTITLESKEIQGAMRESLL 256 (335)
T ss_pred HHHHHhCc----Cc--C-------HHHHHHHHHHHcCCCCCCCCceEEEeCC--ccCCCCCeEEEEcHHHHHHHHHHHHH
Confidence 99875532 21 1 258999999998642 112222111 11112346789999999999999999
Q ss_pred HHHHHHHHHHHHcCCC--cCCcc-eEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 316 KSLKPCEVALNDAKID--KSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 316 ~i~~~i~~~l~~~~~~--~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
++.+.+.+.|+.+... ...++ .|+|+||+|++|.+++++++.|+.++....||+++||+||+..-
T Consensus 257 ~i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~e~l~~~~~~~v~~~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 257 HILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSEEIVVPVHVAANPLESVAIGTGRSL 324 (335)
T ss_pred HHHHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHHHHHHHHHCCCceeCCCHHHHHHHHHHHHH
Confidence 9999999999998644 35577 69999999999999999999999999989999999999998763
No 43
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=100.00 E-value=2.9e-34 Score=330.58 Aligned_cols=312 Identities=27% Similarity=0.392 Sum_probs=233.7
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC-Cc-EEEcHHHHHhhhhCCCchhhhchhhhCCCCC
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-NR-IIVGLPAKRQAITNPNNTLYAIKRLIGRKYT 79 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~-~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~ 79 (1242)
++..|||||||++++++.. |+..++ .+||+|++.++ +. .++|.+|+.+...+|.++... +
T Consensus 4 ~~~~igIDlGt~~~~i~~~--~~~~~~-------~~ps~v~~~~~~~~~~~vG~~a~~~~~~~~~~~~~~--~------- 65 (334)
T PRK13927 4 FSNDLGIDLGTANTLVYVK--GKGIVL-------NEPSVVAIRTDTKKVLAVGEEAKQMLGRTPGNIVAI--R------- 65 (334)
T ss_pred CcceeEEEcCcceEEEEEC--CCcEEE-------ecCCEEEEECCCCeEEEecHHHHHHhhcCCCCEEEE--e-------
Confidence 3457999999999998543 332333 27999999865 33 589999998776666543211 1
Q ss_pred ChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 80 DEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 159 (1242)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa 159 (1242)
.+....+...+.+..+|+++........ .....+|+|||++|++.||+++++|+
T Consensus 66 -------------------------pi~~G~i~d~~~~~~ll~~~~~~~~~~~-~~~~~~vi~vP~~~~~~~r~~~~~a~ 119 (334)
T PRK13927 66 -------------------------PMKDGVIADFDVTEKMLKYFIKKVHKNF-RPSPRVVICVPSGITEVERRAVRESA 119 (334)
T ss_pred -------------------------cCCCCeecCHHHHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 1111222334555666776665544332 22248999999999999999999999
Q ss_pred HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHH
Q psy5911 160 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 239 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~ 239 (1242)
+.||++.+.+++||+|||++|+.... .+..++|||+||||||+++++... . ...++..+||++||+.|.+
T Consensus 120 ~~ag~~~~~li~ep~aaa~~~g~~~~-~~~~~lvvDiGggttdvs~v~~~~----~-----~~~~~~~lGG~~id~~l~~ 189 (334)
T PRK13927 120 LGAGAREVYLIEEPMAAAIGAGLPVT-EPTGSMVVDIGGGTTEVAVISLGG----I-----VYSKSVRVGGDKFDEAIIN 189 (334)
T ss_pred HHcCCCeeccCCChHHHHHHcCCccc-CCCeEEEEEeCCCeEEEEEEecCC----e-----EeeCCcCChHHHHHHHHHH
Confidence 99999999999999999999987654 456689999999999999997653 1 1334567999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce----eeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHH
Q psy5911 240 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ----TDINLPYITADKNGPKHLNVKITRSKLESLVEDLIS 315 (1242)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~ 315 (1242)
++.+++... . + ...||++|+.++.... ..+.+.. .+...+.+..+.|+|++|++++.+.++
T Consensus 190 ~l~~~~~~~----~--~-------~~~ae~iK~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~e~i~~~~~ 254 (334)
T PRK13927 190 YVRRNYNLL----I--G-------ERTAERIKIEIGSAYPGDEVLEMEVRG--RDLVTGLPKTITISSNEIREALQEPLS 254 (334)
T ss_pred HHHHHhCcC----c--C-------HHHHHHHHHHhhccCCCCCCceEEEeC--cccCCCCCeEEEECHHHHHHHHHHHHH
Confidence 998766421 1 1 3478999999986432 2222211 111112345789999999999999999
Q ss_pred HHHHHHHHHHHHcCCCc--CCcc-eEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhh
Q psy5911 316 KSLKPCEVALNDAKIDK--SKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 316 ~i~~~i~~~l~~~~~~~--~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
++.+.+.++|+.++... ..++ .|+|+||+|++|.++++|++.|+.++....+|+++||+|||+++..
T Consensus 255 ~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~~~~~~~v~~~~~P~~ava~Ga~~~~~~ 324 (334)
T PRK13927 255 AIVEAVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLSEETGLPVHVAEDPLTCVARGTGKALEN 324 (334)
T ss_pred HHHHHHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHHHHHCCCcEecCCHHHHHHHHHHHHHhh
Confidence 99999999999886432 2244 5999999999999999999999999999999999999999999765
No 44
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.38 Aligned_cols=311 Identities=26% Similarity=0.371 Sum_probs=240.4
Q ss_pred ccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC-CcE-EEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 646 FGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-NRI-IVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 646 ~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~-~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
+|||+||+++++++. ++..++. .||+|+|..+ +.+ .+|..|+......|.+.... +
T Consensus 6 ~gIDlGt~~~~i~~~--~~~~v~~-------~psvv~~~~~~~~i~~vG~~A~~~~~~~p~~~~~~------~------- 63 (336)
T PRK13928 6 IGIDLGTANVLVYVK--GKGIVLN-------EPSVVAIDKNTNKVLAVGEEARRMVGRTPGNIVAI------R------- 63 (336)
T ss_pred eEEEcccccEEEEEC--CCCEEEc-------cCCEEEEECCCCeEEEecHHHHHhhhcCCCCEEEE------c-------
Confidence 699999999999876 5555554 5999999954 334 68999987765555554320 0
Q ss_pred HhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAG 803 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AG 803 (1242)
| +.+..+...++...+|+++.+.+..........+|||||++|+..||+++++|++.||
T Consensus 64 -------p--------------i~~G~i~d~~~~~~~l~~~~~~~~~~~~~~~p~~vitvP~~~~~~~r~~~~~a~~~ag 122 (336)
T PRK13928 64 -------P--------------LRDGVIADYDVTEKMLKYFINKACGKRFFSKPRIMICIPTGITSVEKRAVREAAEQAG 122 (336)
T ss_pred -------c--------------CCCCeEecHHHHHHHHHHHHHHHhccCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 1 0112234556778888888765543222334479999999999999999999999999
Q ss_pred CceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHH
Q psy5911 804 LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 883 (1242)
Q Consensus 804 l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 883 (1242)
++.+.+++||+|||++|+.... .+..++|||+||||||+++++... . ...++..+||++||+.|.+++..
T Consensus 123 ~~~~~li~ep~Aaa~~~g~~~~-~~~~~lVvDiGggttdvsvv~~g~-----~----~~~~~~~lGG~did~~i~~~l~~ 192 (336)
T PRK13928 123 AKKVYLIEEPLAAAIGAGLDIS-QPSGNMVVDIGGGTTDIAVLSLGG-----I----VTSSSIKVAGDKFDEAIIRYIRK 192 (336)
T ss_pred CCceEecccHHHHHHHcCCccc-CCCeEEEEEeCCCeEEEEEEEeCC-----E----EEeCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999998654 455689999999999999998653 1 23457889999999999999998
Q ss_pred HhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCc----eeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHH
Q psy5911 884 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE----QTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLK 959 (1242)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~ 959 (1242)
+|+...+ ...||++|+.++... ...+.+.. .+...+....++|+|++|++++.+.++++.+
T Consensus 193 ~~~~~~~-------------~~~ae~lK~~~~~~~~~~~~~~~~v~g--~~~~~~~~~~~~i~~~~~~eii~~~~~~i~~ 257 (336)
T PRK13928 193 KYKLLIG-------------ERTAEEIKIKIGTAFPGAREEEMEIRG--RDLVTGLPKTITVTSEEIREALKEPVSAIVQ 257 (336)
T ss_pred HhchhcC-------------HHHHHHHHHHhcccccccCCcEEEEec--ccccCCCceEEEECHHHHHHHHHHHHHHHHH
Confidence 7753322 357999999987541 12222211 1111224467899999999999999999999
Q ss_pred HHHHHHHhcC--CCccCcc-eEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhc
Q psy5911 960 PCEVALNDAK--IDKSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 960 ~i~~~l~~~~--~~~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
.+++.|+.++ +....++ .|+|+||+|++|.+++++++.|+.++....||+++||.|||+++..+.
T Consensus 258 ~i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~~~~~~v~~~~~P~~ava~Gaa~~~~~~~ 325 (336)
T PRK13928 258 AVKSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAEETKVPVYIAEDPISCVALGTGKMLENID 325 (336)
T ss_pred HHHHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHHHHCCCceecCCHHHHHHHHHHHHHhchH
Confidence 9999999986 3455677 799999999999999999999999998899999999999999987643
No 45
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=100.00 E-value=4.4e-34 Score=328.06 Aligned_cols=312 Identities=26% Similarity=0.359 Sum_probs=232.1
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC-----C-cEEEcHHHHHhhhhCCCchhhhchhhhCC
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-----N-RIIVGLPAKRQAITNPNNTLYAIKRLIGR 76 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-----~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~ 76 (1242)
+.-+||||||+||+++....| .++ ..||+|+|.++ + -+.+|.+|+....+.|.+.. +++-+
T Consensus 2 ~~~~giDlGt~~s~i~~~~~~--~~~-------~~psvv~~~~~~~~~~~~~~~vG~~A~~~~~~~~~~~~--~~~pi-- 68 (333)
T TIGR00904 2 SSDIGIDLGTANTLVYVKGRG--IVL-------NEPSVVAIRTDRDAKTKSILAVGHEAKEMLGKTPGNIV--AIRPM-- 68 (333)
T ss_pred CceeEEecCcceEEEEECCCC--EEE-------ecCCEEEEecCCCCCCCeEEEEhHHHHHhhhcCCCCEE--EEecC--
Confidence 345999999999999885433 333 37999999854 2 26799999887655554432 12221
Q ss_pred CCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHH
Q psy5911 77 KYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATK 156 (1242)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~ 156 (1242)
.+..+...+.+..+++++........+.....+|+|||++|+..||++++
T Consensus 69 ------------------------------~~G~i~d~~~~~~~~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~ 118 (333)
T TIGR00904 69 ------------------------------KDGVIADFEVTEKMIKYFIKQVHSRKSFFKPRIVICVPSGITPVERRAVK 118 (333)
T ss_pred ------------------------------CCCEEEcHHHHHHHHHHHHHHHhcccccCCCcEEEEeCCCCCHHHHHHHH
Confidence 11223334555566666665543322222238999999999999999999
Q ss_pred HHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 157 DAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 157 ~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
+|++.||++.+.+++||+|||++|+.... .+..++|+|+||||+|+++++... . ...++..+||++||+.
T Consensus 119 ~~~~~ag~~~~~li~ep~aaa~~~g~~~~-~~~~~lVvDiG~gttdvs~v~~~~----~-----~~~~~~~lGG~did~~ 188 (333)
T TIGR00904 119 ESALSAGAREVYLIEEPMAAAIGAGLPVE-EPTGSMVVDIGGGTTEVAVISLGG----I-----VVSRSIRVGGDEFDEA 188 (333)
T ss_pred HHHHHcCCCeEEEecCHHHHHHhcCCccc-CCceEEEEEcCCCeEEEEEEEeCC----E-----EecCCccchHHHHHHH
Confidence 99999999999999999999999987553 456789999999999999998754 1 1234567999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCcee-----eeeccccccCCCCCeeeEEEEcHHHHHHHHH
Q psy5911 237 IINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT-----DINLPYITADKNGPKHLNVKITRSKLESLVE 311 (1242)
Q Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~-----~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~ 311 (1242)
|++++..++.. ... +..||++|+.++..... .+.+.. .+..........|++++|.+++.
T Consensus 189 l~~~l~~~~~~----~~~---------~~~ae~lK~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~e~i~ 253 (333)
T TIGR00904 189 IINYIRRTYNL----LIG---------EQTAERIKIEIGSAYPLNDEPRKMEVRG--RDLVTGLPRTIEITSVEVREALQ 253 (333)
T ss_pred HHHHHHHHhcc----cCC---------HHHHHHHHHHHhccccccccccceeecC--ccccCCCCeEEEECHHHHHHHHH
Confidence 99999866531 111 35799999999764221 222211 11011123457899999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCc-CCc-c-eEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhh
Q psy5911 312 DLISKSLKPCEVALNDAKIDK-SKI-S-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 312 ~~~~~i~~~i~~~l~~~~~~~-~~i-~-~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+.++++.+.+.+.++.++... .++ + .|+|+||+|++|.++++|++.|+.++....||+++||.||++++..
T Consensus 254 ~~~~~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~~~~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 254 EPVNQIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRNLDKLLSKETGLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred HHHHHHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhhHHHHHHHHHCCCceecCChHHHHHHHHHHHHhC
Confidence 999999999999999887542 233 3 6999999999999999999999999999999999999999998654
No 46
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=100.00 E-value=4.3e-34 Score=326.52 Aligned_cols=309 Identities=23% Similarity=0.355 Sum_probs=244.3
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCc--EEEcHHHHHHhhhCCcchhhHHHHhcCCCCCCh
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNR--IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 721 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~--~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~ 721 (1242)
..+|||+||+++++ +.+|+..++ | .||+|+++.++. +.+|.+|+.+..++|.++... + +.
T Consensus 5 ~~~giDlGt~~~~i--~~~~~~~~~-~------~ps~va~~~~~~~~~~vG~~A~~~~~~~p~~~~~~--~----pi--- 66 (335)
T PRK13929 5 TEIGIDLGTANILV--YSKNKGIIL-N------EPSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAV--R----PM--- 66 (335)
T ss_pred CeEEEEcccccEEE--EECCCcEEe-c------CCcEEEEECCCCeEEEeCHHHHHhhhcCCCcEEEE--e----cC---
Confidence 35799999999974 666665443 4 499999985543 579999999988888876442 1 11
Q ss_pred hHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCC--cEEEEecCCCCHHHHHHHHHHH
Q psy5911 722 IVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIE--KAVITVPAYFNDSQRQATKDAG 799 (1242)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~--~~VitVPa~~~~~qr~~~~~Aa 799 (1242)
....+..-++++.+|++++..++..++..+. .+|||||++|+..||+++.+|+
T Consensus 67 -------------------------~~G~I~d~d~~~~~l~~~~~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~a~ 121 (335)
T PRK13929 67 -------------------------KDGVIADYDMTTDLLKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISDAV 121 (335)
T ss_pred -------------------------CCCccCCHHHHHHHHHHHHHHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHHHH
Confidence 1112233478899999999998887776554 7999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+.||++++.+++||+|||++|+.... .+..++|+|+||||+|++++.+.. . ...++..+||++||+.|.+
T Consensus 122 ~~ag~~~~~li~ep~Aaa~~~g~~~~-~~~~~lvvDiG~gtt~v~vi~~~~-----~----~~~~~~~~GG~~id~~l~~ 191 (335)
T PRK13929 122 KNCGAKNVHLIEEPVAAAIGADLPVD-EPVANVVVDIGGGTTEVAIISFGG-----V----VSCHSIRIGGDQLDEDIVS 191 (335)
T ss_pred HHcCCCeeEeecCHHHHHHhcCCCcC-CCceEEEEEeCCCeEEEEEEEeCC-----E----EEecCcCCHHHHHHHHHHH
Confidence 99999999999999999999987654 456789999999999999998653 1 1345677999999999999
Q ss_pred HHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCc----eeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHH
Q psy5911 880 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE----QTDINLPYITADKNGPKHLNVKITRSKLESLVEDLIS 955 (1242)
Q Consensus 880 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~ 955 (1242)
++...|+...+ ...||++|+.++... ...+.+.. .+...+....+.+++++|++++.+.+.
T Consensus 192 ~l~~~~~~~~~-------------~~~AE~iK~~l~~~~~~~~~~~~~v~g--~~~~~~~p~~i~i~~~~~~~~i~~~l~ 256 (335)
T PRK13929 192 FVRKKYNLLIG-------------ERTAEQVKMEIGYALIEHEPETMEVRG--RDLVTGLPKTITLESKEIQGAMRESLL 256 (335)
T ss_pred HHHHHhCcCcC-------------HHHHHHHHHHHcCCCCCCCCceEEEeC--CccCCCCCeEEEEcHHHHHHHHHHHHH
Confidence 99876542211 258999999998632 11222211 111122346789999999999999999
Q ss_pred HHHHHHHHHHHhcCCC--ccCcc-eEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 956 KSLKPCEVALNDAKID--KSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 956 ~~~~~i~~~l~~~~~~--~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
++.+.+.+.|+++... ...++ .|+|+||+|++|.+.+++++.|+.++....||+++||.||+..-
T Consensus 257 ~i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~e~l~~~~~~~v~~~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 257 HILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSEEIVVPVHVAANPLESVAIGTGRSL 324 (335)
T ss_pred HHHHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHHHHHHHHHCCCceeCCCHHHHHHHHHHHHH
Confidence 9999999999998643 35577 69999999999999999999999999988999999999998763
No 47
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=100.00 E-value=4.2e-33 Score=321.68 Aligned_cols=314 Identities=26% Similarity=0.359 Sum_probs=237.9
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC-C-cEEEcHHHHHhhhhCCCchhhhchhhhCCCCC
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-N-RIIVGLPAKRQAITNPNNTLYAIKRLIGRKYT 79 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~ 79 (1242)
|+..+||||||++|+++++.++ .++ .+||+|++..+ + .+++|.+|+......|.+.. +++
T Consensus 7 ~~~~vgiDlGt~~t~i~~~~~~--~~~-------~~ps~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~--~~~------- 68 (335)
T PRK13930 7 FSKDIGIDLGTANTLVYVKGKG--IVL-------NEPSVVAIDTKTGKVLAVGEEAKEMLGRTPGNIE--AIR------- 68 (335)
T ss_pred hccceEEEcCCCcEEEEECCCC--EEE-------ecCCEEEEECCCCeEEEEcHHHHHhhhcCCCCeE--Eee-------
Confidence 4566999999999999987433 233 25999999853 2 46899999887655554321 111
Q ss_pred ChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 80 DEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 159 (1242)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa 159 (1242)
| +....+...+.+..+|+++.+.+..........+|+|+|++|+..+|+++.+|+
T Consensus 69 -----------p--------------i~~G~i~d~~~~e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~~~ 123 (335)
T PRK13930 69 -----------P--------------LKDGVIADFEATEAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVREAA 123 (335)
T ss_pred -----------c--------------CCCCeEcCHHHHHHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 1 122233345667888888887665544444678999999999999999999999
Q ss_pred HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHH
Q psy5911 160 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 239 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~ 239 (1242)
+.+|++.+.+++||+|||++|+.... .....+|||+||||||++++.... ++ ..+...+||.+||+.|.+
T Consensus 124 e~~g~~~~~lv~ep~AAa~a~g~~~~-~~~~~lVvDiG~gttdvs~v~~g~--------~~-~~~~~~lGG~~id~~l~~ 193 (335)
T PRK13930 124 EHAGAREVYLIEEPMAAAIGAGLPVT-EPVGNMVVDIGGGTTEVAVISLGG--------IV-YSESIRVAGDEMDEAIVQ 193 (335)
T ss_pred HHcCCCeEEecccHHHHHHhcCCCcC-CCCceEEEEeCCCeEEEEEEEeCC--------EE-eecCcCchhHHHHHHHHH
Confidence 99999999999999999999987544 344578999999999999997643 11 245678999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCcee----eeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHH
Q psy5911 240 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT----DINLPYITADKNGPKHLNVKITRSKLESLVEDLIS 315 (1242)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~----~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~ 315 (1242)
++..++. .+.. ...||++|+.++..... .+.+.. .+...+....+.|++++|++++.+.++
T Consensus 194 ~l~~~~~----~~~~---------~~~ae~~K~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~e~i~~~~~ 258 (335)
T PRK13930 194 YVRRKYN----LLIG---------ERTAEEIKIEIGSAYPLDEEESMEVRG--RDLVTGLPKTIEISSEEVREALAEPLQ 258 (335)
T ss_pred HHHHHhC----CCCC---------HHHHHHHHHHhhcCcCCCCCceEEEEC--ccCCCCCCeeEEECHHHHHHHHHHHHH
Confidence 9987653 2111 25799999999865321 122211 111111234788999999999999999
Q ss_pred HHHHHHHHHHHHcCCCc--CCcce-EEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhh
Q psy5911 316 KSLKPCEVALNDAKIDK--SKISE-IILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 316 ~i~~~i~~~l~~~~~~~--~~i~~-ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l 383 (1242)
++.+.+.++|+.+.... ..++. |+|+||+|++|.++++|++.|+.++....+|+++||+|||+.+...
T Consensus 259 ~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~~~~~~v~~~~~p~~ava~Ga~~~~~~~ 329 (335)
T PRK13930 259 QIVEAVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSEETGLPVHIAEDPLTCVARGTGKALENL 329 (335)
T ss_pred HHHHHHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHHHHCCCceecCCHHHHHHHHHHHHHhCh
Confidence 99999999999875332 23454 9999999999999999999999999989999999999999987643
No 48
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=100.00 E-value=1.4e-31 Score=308.45 Aligned_cols=309 Identities=27% Similarity=0.384 Sum_probs=229.4
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC-Cc-EEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-NR-IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~-~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
.++||+||+++++.. .|+..++ .+||+|+|..+ ++ .++|.+|+.+...+|.++... +
T Consensus 7 ~igIDlGt~~~~i~~--~~~~~~~-------~~ps~v~~~~~~~~~~~vG~~a~~~~~~~~~~~~~~--~---------- 65 (334)
T PRK13927 7 DLGIDLGTANTLVYV--KGKGIVL-------NEPSVVAIRTDTKKVLAVGEEAKQMLGRTPGNIVAI--R---------- 65 (334)
T ss_pred eeEEEcCcceEEEEE--CCCcEEE-------ecCCEEEEECCCCeEEEecHHHHHHhhcCCCCEEEE--e----------
Confidence 468999999999743 4443333 38999999855 33 589999998876666553211 0
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
|. ....+..-+.+..+|+++........ .....+|+|||++|++.+|++++.|++.|
T Consensus 66 --------pi--------------~~G~i~d~~~~~~ll~~~~~~~~~~~-~~~~~~vi~vP~~~~~~~r~~~~~a~~~a 122 (334)
T PRK13927 66 --------PM--------------KDGVIADFDVTEKMLKYFIKKVHKNF-RPSPRVVICVPSGITEVERRAVRESALGA 122 (334)
T ss_pred --------cC--------------CCCeecCHHHHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 10 11111122344556666555443332 11248999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
|++.+.+++||+|||++|+.... .+..++|||+||||||+++++... . ...++..+||++||+.|.+++.
T Consensus 123 g~~~~~li~ep~aaa~~~g~~~~-~~~~~lvvDiGggttdvs~v~~~~----~-----~~~~~~~lGG~~id~~l~~~l~ 192 (334)
T PRK13927 123 GAREVYLIEEPMAAAIGAGLPVT-EPTGSMVVDIGGGTTEVAVISLGG----I-----VYSKSVRVGGDKFDEAIINYVR 192 (334)
T ss_pred CCCeeccCCChHHHHHHcCCccc-CCCeEEEEEeCCCeEEEEEEecCC----e-----EeeCCcCChHHHHHHHHHHHHH
Confidence 99999999999999999988654 355689999999999999997653 1 1334567999999999999998
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCce----eeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ----TDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSL 958 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~ 958 (1242)
+++..... ...||++|+.++.... ..+.+.. .+...+.+..+.|+|++|++++.+.+.++.
T Consensus 193 ~~~~~~~~-------------~~~ae~iK~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~ 257 (334)
T PRK13927 193 RNYNLLIG-------------ERTAERIKIEIGSAYPGDEVLEMEVRG--RDLVTGLPKTITISSNEIREALQEPLSAIV 257 (334)
T ss_pred HHhCcCcC-------------HHHHHHHHHHhhccCCCCCCceEEEeC--cccCCCCCeEEEECHHHHHHHHHHHHHHHH
Confidence 77642211 3478999999875432 2222211 111122345789999999999999999999
Q ss_pred HHHHHHHHhcCCC--ccCcc-eEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 959 KPCEVALNDAKID--KSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 959 ~~i~~~l~~~~~~--~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+.|.++|++++.. ...++ .|+|+||+|++|.++++|++.|+.++....+|+++||+|||+++..
T Consensus 258 ~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~~~~~~~v~~~~~P~~ava~Ga~~~~~~ 324 (334)
T PRK13927 258 EAVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLSEETGLPVHVAEDPLTCVARGTGKALEN 324 (334)
T ss_pred HHHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHHHHHCCCcEecCCHHHHHHHHHHHHHhh
Confidence 9999999988643 22244 5999999999999999999999999999999999999999999765
No 49
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=100.00 E-value=1.9e-31 Score=306.28 Aligned_cols=309 Identities=25% Similarity=0.339 Sum_probs=228.0
Q ss_pred ccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC-----C-cEEEcHHHHHHhhhCCcchhhHHHHhcCCCCC
Q psy5911 646 FGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-----N-RIIVGLPAKRQAITNPNNTLYAIKRLIGRKYT 719 (1242)
Q Consensus 646 ~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~-----~-~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~ 719 (1242)
+|||+||++|++++..+| .++ ..||+|+|..+ + -+.+|.+|+....+.|.+... ++-+.
T Consensus 5 ~giDlGt~~s~i~~~~~~--~~~-------~~psvv~~~~~~~~~~~~~~~vG~~A~~~~~~~~~~~~~--~~pi~---- 69 (333)
T TIGR00904 5 IGIDLGTANTLVYVKGRG--IVL-------NEPSVVAIRTDRDAKTKSILAVGHEAKEMLGKTPGNIVA--IRPMK---- 69 (333)
T ss_pred eEEecCcceEEEEECCCC--EEE-------ecCCEEEEecCCCCCCCeEEEEhHHHHHhhhcCCCCEEE--EecCC----
Confidence 699999999998885433 344 37999999844 2 266999998776555554321 11111
Q ss_pred ChhHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 720 DEIVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 799 (1242)
Q Consensus 720 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa 799 (1242)
+..+..-+.+..+++++........+.....+|+|||++|+..+|+++++|+
T Consensus 70 ----------------------------~G~i~d~~~~~~~~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~~~ 121 (333)
T TIGR00904 70 ----------------------------DGVIADFEVTEKMIKYFIKQVHSRKSFFKPRIVICVPSGITPVERRAVKESA 121 (333)
T ss_pred ----------------------------CCEEEcHHHHHHHHHHHHHHHhcccccCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 1111122344455555554443322222238999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+.+|++.+.+++||+|||++|+.... .+..++|+|+||||||+++++... . ...++..+||++||+.|++
T Consensus 122 ~~ag~~~~~li~ep~aaa~~~g~~~~-~~~~~lVvDiG~gttdvs~v~~~~----~-----~~~~~~~lGG~did~~l~~ 191 (333)
T TIGR00904 122 LSAGAREVYLIEEPMAAAIGAGLPVE-EPTGSMVVDIGGGTTEVAVISLGG----I-----VVSRSIRVGGDEFDEAIIN 191 (333)
T ss_pred HHcCCCeEEEecCHHHHHHhcCCccc-CCceEEEEEcCCCeEEEEEEEeCC----E-----EecCCccchHHHHHHHHHH
Confidence 99999999999999999999987654 456789999999999999998754 1 1335567999999999999
Q ss_pred HHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCce-----eeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHH
Q psy5911 880 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ-----TDINLPYITADKNGPKHLNVKITRSKLESLVEDLI 954 (1242)
Q Consensus 880 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~ 954 (1242)
++.+++..... +..||++|+.++.... ..+.+.. .+...+....+.+++++|.+++.+.+
T Consensus 192 ~l~~~~~~~~~-------------~~~ae~lK~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~e~i~~~~ 256 (333)
T TIGR00904 192 YIRRTYNLLIG-------------EQTAERIKIEIGSAYPLNDEPRKMEVRG--RDLVTGLPRTIEITSVEVREALQEPV 256 (333)
T ss_pred HHHHHhcccCC-------------HHHHHHHHHHHhccccccccccceeecC--ccccCCCCeEEEECHHHHHHHHHHHH
Confidence 99876642111 3579999999875322 1222211 11111223457899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCc-cCc-c-eEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 955 SKSLKPCEVALNDAKIDK-SKI-S-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 955 ~~~~~~i~~~l~~~~~~~-~~i-~-~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
.++.+.+.+.++.+.... .++ + .|+|+||+|++|.++++|++.|+.++....||+++||.||++++..
T Consensus 257 ~~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~~~~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 257 NQIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRNLDKLLSKETGLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred HHHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhhHHHHHHHHHCCCceecCChHHHHHHHHHHHHhC
Confidence 999999999999887542 233 3 6999999999999999999999999999999999999999998654
No 50
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=99.98 E-value=2.4e-30 Score=298.77 Aligned_cols=311 Identities=24% Similarity=0.314 Sum_probs=233.3
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC-C-cEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-N-RIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~-~-~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
.+++|+||+++++++..+ ..++ .+||+|++... + .+++|.+|+......|.+.-. +
T Consensus 10 ~vgiDlGt~~t~i~~~~~--~~~~-------~~ps~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~--~----------- 67 (335)
T PRK13930 10 DIGIDLGTANTLVYVKGK--GIVL-------NEPSVVAIDTKTGKVLAVGEEAKEMLGRTPGNIEA--I----------- 67 (335)
T ss_pred ceEEEcCCCcEEEEECCC--CEEE-------ecCCEEEEECCCCeEEEEcHHHHHhhhcCCCCeEE--e-----------
Confidence 378999999999988633 2333 25999999752 3 368999998776555544211 0
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
.| +....+..-+.+..+|+++.+.+..........+|+|+|++|+..+|+++.+|++.+
T Consensus 68 -------~p--------------i~~G~i~d~~~~e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~~~e~~ 126 (335)
T PRK13930 68 -------RP--------------LKDGVIADFEATEAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVREAAEHA 126 (335)
T ss_pred -------ec--------------CCCCeEcCHHHHHHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHHHHHHc
Confidence 01 111112223557777888876655543444678999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
|++.+.+++||+|||++|+.... .....+|||+||||||++++.... . ...+...+||.+||+.|.+++.
T Consensus 127 g~~~~~lv~ep~AAa~a~g~~~~-~~~~~lVvDiG~gttdvs~v~~g~--------~-~~~~~~~lGG~~id~~l~~~l~ 196 (335)
T PRK13930 127 GAREVYLIEEPMAAAIGAGLPVT-EPVGNMVVDIGGGTTEVAVISLGG--------I-VYSESIRVAGDEMDEAIVQYVR 196 (335)
T ss_pred CCCeEEecccHHHHHHhcCCCcC-CCCceEEEEeCCCeEEEEEEEeCC--------E-EeecCcCchhHHHHHHHHHHHH
Confidence 99999999999999999987654 344568999999999999997643 1 1245678999999999999998
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCcee----eEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT----DINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSL 958 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~----~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~ 958 (1242)
+++.. +.. ...||++|+.++..... .+.+.. .+...+....+.|++++|++++.+.+.++.
T Consensus 197 ~~~~~----~~~---------~~~ae~~K~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~ 261 (335)
T PRK13930 197 RKYNL----LIG---------ERTAEEIKIEIGSAYPLDEEESMEVRG--RDLVTGLPKTIEISSEEVREALAEPLQQIV 261 (335)
T ss_pred HHhCC----CCC---------HHHHHHHHHHhhcCcCCCCCceEEEEC--ccCCCCCCeeEEECHHHHHHHHHHHHHHHH
Confidence 87542 111 25789999999754321 222211 111122335788999999999999999999
Q ss_pred HHHHHHHHhcCCCc--cCcce-EEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhh
Q psy5911 959 KPCEVALNDAKIDK--SKISE-IILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 959 ~~i~~~l~~~~~~~--~~i~~-ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l 1023 (1242)
+.+.++++.+.... ..++. |+|+||+|++|.++++|++.|+.++....+|+++||.||++.+...
T Consensus 262 ~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~~~~~~v~~~~~p~~ava~Ga~~~~~~~ 329 (335)
T PRK13930 262 EAVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSEETGLPVHIAEDPLTCVARGTGKALENL 329 (335)
T ss_pred HHHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHHHHCCCceecCCHHHHHHHHHHHHHhCh
Confidence 99999999875332 23454 9999999999999999999999999888999999999999998643
No 51
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.97 E-value=9.4e-31 Score=289.38 Aligned_cols=310 Identities=30% Similarity=0.406 Sum_probs=223.3
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC--cEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN--RIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~--~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
.-+||||||+++.++.-..| .++ + .||+|+++.+. -..+|.+|+....+.|.+.
T Consensus 2 ~~igIDLGT~~t~i~~~~~G--iv~-~------epSvVA~~~~~~~i~avG~~A~~m~gktp~~i--------------- 57 (326)
T PF06723_consen 2 KDIGIDLGTSNTRIYVKGKG--IVL-N------EPSVVAYDKDTGKILAVGDEAKAMLGKTPDNI--------------- 57 (326)
T ss_dssp SEEEEEE-SSEEEEEETTTE--EEE-E------EES-EEEETTT--EEEESHHHHTTTTS-GTTE---------------
T ss_pred CceEEecCcccEEEEECCCC--EEE-e------cCcEEEEECCCCeEEEEhHHHHHHhhcCCCcc---------------
Confidence 45899999999998543333 222 2 39999999652 3459999977555444331
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
.+..++.+..+...++...+|+++.+.+.......-.+++++||+.-++.+|+++.+|+..
T Consensus 58 -------------------~~~~Pl~~GvI~D~~~~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~~~ 118 (326)
T PF06723_consen 58 -------------------EVVRPLKDGVIADYEAAEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAARQ 118 (326)
T ss_dssp -------------------EEE-SEETTEESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHHHH
T ss_pred -------------------EEEccccCCcccCHHHHHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 1222345566777789999999999988764333456899999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
||...+.+++||.|||+..+.+-. .+...+|+|+||||+|++++.... ++.+.. ...||++||++|.+|+
T Consensus 119 aGa~~V~li~ep~AaAiGaGl~i~-~~~g~miVDIG~GtTdiavislgg--------iv~s~s-i~~gG~~~DeaI~~~i 188 (326)
T PF06723_consen 119 AGARKVYLIEEPIAAAIGAGLDIF-EPRGSMIVDIGGGTTDIAVISLGG--------IVASRS-IRIGGDDIDEAIIRYI 188 (326)
T ss_dssp TT-SEEEEEEHHHHHHHHTT--TT-SSS-EEEEEE-SS-EEEEEEETTE--------EEEEEE-ES-SHHHHHHHHHHHH
T ss_pred cCCCEEEEecchHHHHhcCCCCCC-CCCceEEEEECCCeEEEEEEECCC--------EEEEEE-EEecCcchhHHHHHHH
Confidence 999999999999999999998765 445567779999999999997544 122222 3569999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce----eeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ----TDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKS 317 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i 317 (1242)
.++|.-..+ ...||++|+.+++... ..+.+ ...+...+..-++.|+.+++.+.+.+.+.++
T Consensus 189 r~~y~l~Ig-------------~~tAE~iK~~~g~~~~~~~~~~~~v--~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I 253 (326)
T PF06723_consen 189 REKYNLLIG-------------ERTAEKIKIEIGSASPPEEEESMEV--RGRDLITGLPKSIEITSSEVREAIEPPVDQI 253 (326)
T ss_dssp HHHHSEE---------------HHHHHHHHHHH-BSS--HHHHEEEE--EEEETTTTCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHhhCcccC-------------HHHHHHHHHhcceeeccCCCceEEE--ECccccCCCcEEEEEcHHHHHHHHHHHHHHH
Confidence 999864444 5689999999986532 22333 2222333456789999999999999999999
Q ss_pred HHHHHHHHHHcCCCc-CCc--ceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 318 LKPCEVALNDAKIDK-SKI--SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 318 ~~~i~~~l~~~~~~~-~~i--~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
.+.++++|+...... .|| ++|+|+||+|+++.+.++|++.++.++....+|.++||.||.....
T Consensus 254 ~~~i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~~i~~~~~~pV~va~~P~~~va~G~~~~l~ 320 (326)
T PF06723_consen 254 VEAIKEVLEKTPPELAADILENGIVLTGGGALLRGLDEYISEETGVPVRVADDPLTAVARGAGKLLE 320 (326)
T ss_dssp HHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHHHHHHHHCCCEEEcCCHHHHHHHHHHHHHh
Confidence 999999999765432 132 5699999999999999999999999999999999999999987643
No 52
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.96 E-value=1.1e-27 Score=251.27 Aligned_cols=316 Identities=27% Similarity=0.354 Sum_probs=242.5
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEec--CC--cEEEcHHHHHhhhhCCCchhhhchhhhCCCC
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTE--DN--RIIVGLPAKRQAITNPNNTLYAIKRLIGRKY 78 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~--~~--~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~ 78 (1242)
+..+||||||.|+.|..-..| ++.++ ||+|++.. +. -..+|.+|+...-+.|.+.
T Consensus 6 s~diGIDLGTanTlV~~k~kg---IVl~e------PSVVAi~~~~~~~~v~aVG~eAK~MlGrTP~ni------------ 64 (342)
T COG1077 6 SNDIGIDLGTANTLVYVKGKG---IVLNE------PSVVAIESEGKTKVVLAVGEEAKQMLGRTPGNI------------ 64 (342)
T ss_pred cccceeeecccceEEEEcCce---EEecC------ceEEEEeecCCCceEEEehHHHHHHhccCCCCc------------
Confidence 567999999999998775333 45544 99999987 22 2458999876544444332
Q ss_pred CChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhc-CCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 79 TDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLN-EKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~-~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
...-+.++..+...++...+|+|+.+.....-+ ....++++.||..-++..|+++++
T Consensus 65 ----------------------~aiRPmkdGVIAd~~~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~e 122 (342)
T COG1077 65 ----------------------VAIRPMKDGVIADFEVTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIKE 122 (342)
T ss_pred ----------------------eEEeecCCcEeecHHHHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHHH
Confidence 122234556677788999999999998864333 445579999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 237 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l 237 (1242)
|++.||...+.++.||.|||+..++.-.....+ +|+|+||||+|++++.+.+...... ..+||+.||+.+
T Consensus 123 a~~~aGa~~V~lieEp~aAAIGaglpi~ep~G~-mvvDIGgGTTevaVISlggiv~~~S---------irv~GD~~De~I 192 (342)
T COG1077 123 AAESAGAREVYLIEEPMAAAIGAGLPIMEPTGS-MVVDIGGGTTEVAVISLGGIVSSSS---------VRVGGDKMDEAI 192 (342)
T ss_pred HHHhccCceEEEeccHHHHHhcCCCcccCCCCC-EEEEeCCCceeEEEEEecCEEEEee---------EEEecchhhHHH
Confidence 999999999999999999999998876644445 5569999999999999876222222 345999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCcee----eeeccccccCCCCCeeeEEEEcHHHHHHHHHHH
Q psy5911 238 INHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT----DINLPYITADKNGPKHLNVKITRSKLESLVEDL 313 (1242)
Q Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~----~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~ 313 (1242)
..|+.++|+--.+ .+.+|++|....+.-.. ...++....+...+..-.++++-+++.+.+++.
T Consensus 193 i~yvr~~~nl~IG-------------e~taE~iK~eiG~a~~~~~~~~~~~eV~Grdl~~GlPk~i~i~s~ev~eal~~~ 259 (342)
T COG1077 193 IVYVRKKYNLLIG-------------ERTAEKIKIEIGSAYPEEEDEELEMEVRGRDLVTGLPKTITINSEEIAEALEEP 259 (342)
T ss_pred HHHHHHHhCeeec-------------HHHHHHHHHHhcccccccCCccceeeEEeeecccCCCeeEEEcHHHHHHHHHHH
Confidence 9999999876555 34689999987654321 111222222222223456899999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCc--CCcce-EEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhc
Q psy5911 314 ISKSLKPCEVALNDAKIDK--SKISE-IILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 314 ~~~i~~~i~~~l~~~~~~~--~~i~~-ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~ 384 (1242)
++.|.+.++..|+...... +-++. ++|+||+|.+..+.+.|++..+.++....+|..|||+|+......+.
T Consensus 260 v~~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD~~i~~et~~pv~ia~~pL~~Va~G~G~~le~~~ 333 (342)
T COG1077 260 LNGIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLDRLLSEETGVPVIIADDPLTCVAKGTGKALEALD 333 (342)
T ss_pred HHHHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCchHhHHhccCCeEEECCChHHHHHhccchhhhhhH
Confidence 9999999999999866432 22455 99999999999999999999999999999999999999987766543
No 53
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.96 E-value=2e-28 Score=264.05 Aligned_cols=205 Identities=22% Similarity=0.305 Sum_probs=175.4
Q ss_pred eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCC
Q psy5911 109 KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDD 188 (1242)
Q Consensus 109 ~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~ 188 (1242)
..+...+.++++|+++++.++.+++.++.++|+|||++|++.||+++.+|++.||++++.+++||.|||++|+..
T Consensus 34 g~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa~~~~~~----- 108 (239)
T TIGR02529 34 GIVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAAAVLQIK----- 108 (239)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHHHHhcCC-----
Confidence 345557889999999999999999989999999999999999999999999999999999999999999999753
Q ss_pred cEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q psy5911 189 RIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAE 268 (1242)
Q Consensus 189 ~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e 268 (1242)
..+|+|+||||+|+++++-.. ++. ..+..+||++||+.|.+.+. ++ ...||
T Consensus 109 -~~~vvDiGggtt~i~i~~~G~--------i~~-~~~~~~GG~~it~~Ia~~~~--------i~-----------~~~AE 159 (239)
T TIGR02529 109 -NGAVVDVGGGTTGISILKKGK--------VIY-SADEPTGGTHMSLVLAGAYG--------IS-----------FEEAE 159 (239)
T ss_pred -CcEEEEeCCCcEEEEEEECCe--------EEE-EEeeecchHHHHHHHHHHhC--------CC-----------HHHHH
Confidence 248999999999999986332 222 34567899999998875542 21 36899
Q ss_pred HHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChH
Q psy5911 269 KAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMP 348 (1242)
Q Consensus 269 ~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip 348 (1242)
++|+.++. .+++.+++.++++++...+++.|++. .++.|+|+||+|++|
T Consensus 160 ~~K~~~~~--------------------------~~~~~~~i~~~~~~i~~~i~~~l~~~-----~~~~v~LtGG~a~ip 208 (239)
T TIGR02529 160 EYKRGHKD--------------------------EEEIFPVVKPVYQKMASIVKRHIEGQ-----GVKDLYLVGGACSFS 208 (239)
T ss_pred HHHHhcCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEECchhcch
Confidence 99987531 35577899999999999999999864 367899999999999
Q ss_pred HHHHHHHHhcccccccCCCcchhhHhHHHH
Q psy5911 349 LVQKMVSEFFEKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 349 ~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 378 (1242)
.+++.+++.|+.++..+.||++++|.|||+
T Consensus 209 gl~e~l~~~lg~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 209 GFADVFEKQLGLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred hHHHHHHHHhCCCcccCCCCCeehhheeec
Confidence 999999999999999999999999999986
No 54
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.96 E-value=2.8e-28 Score=269.71 Aligned_cols=311 Identities=29% Similarity=0.380 Sum_probs=220.8
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCC-c-EEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN-R-IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~-~-~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
.+|+|+||+++.+.+ +++-.++. .||+|+++.+. + ..+|.+|+....+.|.+.
T Consensus 3 ~igIDLGT~~t~i~~--~~~Giv~~-------epSvVA~~~~~~~i~avG~~A~~m~gktp~~i---------------- 57 (326)
T PF06723_consen 3 DIGIDLGTSNTRIYV--KGKGIVLN-------EPSVVAYDKDTGKILAVGDEAKAMLGKTPDNI---------------- 57 (326)
T ss_dssp EEEEEE-SSEEEEEE--TTTEEEEE-------EES-EEEETTT--EEEESHHHHTTTTS-GTTE----------------
T ss_pred ceEEecCcccEEEEE--CCCCEEEe-------cCcEEEEECCCCeEEEEhHHHHHHhhcCCCcc----------------
Confidence 468999999998744 44333442 39999998642 3 458999976554444332
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
.+...+.+..+.-.++...+|+++.+.+.......-.+++++||+.-++.+|+++.+|+..+
T Consensus 58 ------------------~~~~Pl~~GvI~D~~~~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~~~a 119 (326)
T PF06723_consen 58 ------------------EVVRPLKDGVIADYEAAEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAARQA 119 (326)
T ss_dssp ------------------EEE-SEETTEESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHHHHT
T ss_pred ------------------EEEccccCCcccCHHHHHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 11122334455667888889999988876642334558999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
|...+.++.||.|||+..+.+-... ...+|+|+||||||++++.... ++.+. ....||++||++|.+|++
T Consensus 120 Ga~~V~li~ep~AaAiGaGl~i~~~-~g~miVDIG~GtTdiavislgg--------iv~s~-si~~gG~~~DeaI~~~ir 189 (326)
T PF06723_consen 120 GARKVYLIEEPIAAAIGAGLDIFEP-RGSMIVDIGGGTTDIAVISLGG--------IVASR-SIRIGGDDIDEAIIRYIR 189 (326)
T ss_dssp T-SEEEEEEHHHHHHHHTT--TTSS-S-EEEEEE-SS-EEEEEEETTE--------EEEEE-EES-SHHHHHHHHHHHHH
T ss_pred CCCEEEEecchHHHHhcCCCCCCCC-CceEEEEECCCeEEEEEEECCC--------EEEEE-EEEecCcchhHHHHHHHH
Confidence 9999999999999999999887644 4456669999999999997653 11222 245699999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCcee--eEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT--DINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKP 960 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~--~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~ 960 (1242)
++|.-..+ ...||++|+.+++.... .-.+.....+...+..-++.|+-+++.+++.+.+.++.+.
T Consensus 190 ~~y~l~Ig-------------~~tAE~iK~~~g~~~~~~~~~~~~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I~~~ 256 (326)
T PF06723_consen 190 EKYNLLIG-------------ERTAEKIKIEIGSASPPEEEESMEVRGRDLITGLPKSIEITSSEVREAIEPPVDQIVEA 256 (326)
T ss_dssp HHHSEE---------------HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred HhhCcccC-------------HHHHHHHHHhcceeeccCCCceEEEECccccCCCcEEEEEcHHHHHHHHHHHHHHHHHH
Confidence 99875544 66899999998764221 1122223334445567889999999999999999999999
Q ss_pred HHHHHHhcCCCc-cCc--ceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhh
Q psy5911 961 CEVALNDAKIDK-SKI--SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 961 i~~~l~~~~~~~-~~i--~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
++++|+...... .|| ++|+|+||+|+++.+.++|++.++.++....+|..+||.||.....
T Consensus 257 i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~~i~~~~~~pV~va~~P~~~va~G~~~~l~ 320 (326)
T PF06723_consen 257 IKEVLEKTPPELAADILENGIVLTGGGALLRGLDEYISEETGVPVRVADDPLTAVARGAGKLLE 320 (326)
T ss_dssp HHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHHSS-EEE-SSTTTHHHHHHHHTTC
T ss_pred HHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHHHHHHHHCCCEEEcCCHHHHHHHHHHHHHh
Confidence 999999765332 132 5699999999999999999999999999999999999999987654
No 55
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.95 E-value=9.6e-27 Score=250.99 Aligned_cols=205 Identities=22% Similarity=0.310 Sum_probs=175.7
Q ss_pred eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCC
Q psy5911 749 QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDD 828 (1242)
Q Consensus 749 ~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~ 828 (1242)
..+...+..+++|+++++.++.+++.++.++|+|||++|++.||+++.+|++.||++++.+++||.|||++|+...
T Consensus 34 g~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa~~~~~~~---- 109 (239)
T TIGR02529 34 GIVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAAAVLQIKN---- 109 (239)
T ss_pred CeEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHHHHhcCCC----
Confidence 3455668899999999999999999999999999999999999999999999999999999999999999997542
Q ss_pred cEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHH
Q psy5911 829 RIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAE 908 (1242)
Q Consensus 829 ~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e 908 (1242)
.+|+|+||||+|+++++... ++. ..+..+||++||+.|.+.+. ++ ..+||
T Consensus 110 --~~vvDiGggtt~i~i~~~G~--------i~~-~~~~~~GG~~it~~Ia~~~~--------i~-----------~~~AE 159 (239)
T TIGR02529 110 --GAVVDVGGGTTGISILKKGK--------VIY-SADEPTGGTHMSLVLAGAYG--------IS-----------FEEAE 159 (239)
T ss_pred --cEEEEeCCCcEEEEEEECCe--------EEE-EEeeecchHHHHHHHHHHhC--------CC-----------HHHHH
Confidence 48899999999999986332 222 34567899999998876542 11 36899
Q ss_pred HhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchH
Q psy5911 909 KAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMP 988 (1242)
Q Consensus 909 ~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip 988 (1242)
++|+.++. .+++.+++.|+++++.+.+++.|++. .++.|+|+||+|++|
T Consensus 160 ~~K~~~~~--------------------------~~~~~~~i~~~~~~i~~~i~~~l~~~-----~~~~v~LtGG~a~ip 208 (239)
T TIGR02529 160 EYKRGHKD--------------------------EEEIFPVVKPVYQKMASIVKRHIEGQ-----GVKDLYLVGGACSFS 208 (239)
T ss_pred HHHHhcCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEECchhcch
Confidence 99987531 35677899999999999999999865 367899999999999
Q ss_pred HHHHHHHhhhcccccccCCcchhhhhhHHH
Q psy5911 989 LVQKMVSEFFEKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 989 ~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
.+++.+++.|+.++..+.||++++|.|||+
T Consensus 209 gl~e~l~~~lg~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 209 GFADVFEKQLGLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred hHHHHHHHHhCCCcccCCCCCeehhheeec
Confidence 999999999999999999999999999986
No 56
>PRK14148 heat shock protein GrpE; Provisional
Probab=99.94 E-value=5.3e-27 Score=235.44 Aligned_cols=142 Identities=21% Similarity=0.273 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc--chhhhHHHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN--QTKESEIIFLIF 610 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~--~~~~~~g~~~~~ 610 (1242)
+.+++.+++ .++++|+|..||++|+|||+++|++++++||.++|+++||||+||||||+.+.... ..++.+|++||+
T Consensus 49 l~~l~~e~~-elkd~~lR~~Ae~eN~rKR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~~~~~~l~~Gv~mi~ 127 (195)
T PRK14148 49 IKELEDSCD-QFKDEALRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQALKHEVKLEEAIAMKEGIELTA 127 (195)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccchhHHHHHHHHHHHH
Confidence 333444443 35799999999999999999999999999999999999999999999999986542 357999999999
Q ss_pred HHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 611 KLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 611 ~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
++|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.|+|+|- ..+++ .-|+.|...
T Consensus 128 k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~---~gtVv~V~qkGY------~l~dRVLRpA~V~Va 193 (195)
T PRK14148 128 KMLVDILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFE---DNTIFDVFQKGY------MLNGRIVRAAKVVIV 193 (195)
T ss_pred HHHHHHHHHCCCEEeCCCCCCCChhHhheeeeeCCCCCC---cCEEEEEeeCCc------EeCCEeeeccEEEeC
Confidence 999999999999999999999999999999987665544 677999999992 22233 347777653
No 57
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.94 E-value=1.8e-25 Score=245.63 Aligned_cols=202 Identities=24% Similarity=0.355 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEE
Q psy5911 114 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVV 193 (1242)
Q Consensus 114 ~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV 193 (1242)
.+.....|+++++.++.+++.++..++++||++|+..+|.++.+|++.||+++..+++||.|++.+|.... .+|
T Consensus 66 i~~a~~~i~~~~~~ae~~~g~~i~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~~~~------~~v 139 (267)
T PRK15080 66 FIGAVTIVRRLKATLEEKLGRELTHAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLGIDN------GAV 139 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhCCCC------cEE
Confidence 56778899999999999989889999999999999999999999999999999999999999999886531 488
Q ss_pred EEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHH
Q psy5911 194 YDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIE 273 (1242)
Q Consensus 194 ~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ 273 (1242)
+|+||||||+++++-. .+ .. .++..+||++||+.|++++. .+ +.+||++|+.
T Consensus 140 vDIGggtt~i~v~~~g------~~--~~-~~~~~~GG~~it~~Ia~~l~--------i~-----------~~eAE~lK~~ 191 (267)
T PRK15080 140 VDIGGGTTGISILKDG------KV--VY-SADEPTGGTHMSLVLAGAYG--------IS-----------FEEAEQYKRD 191 (267)
T ss_pred EEeCCCcEEEEEEECC------eE--EE-EecccCchHHHHHHHHHHhC--------CC-----------HHHHHHHHhc
Confidence 8999999999998532 22 22 24678999999999987752 11 4578999876
Q ss_pred hcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHH
Q psy5911 274 LSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKM 353 (1242)
Q Consensus 274 Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~ 353 (1242)
++ +++++.++++|+++++.+.+++.++.. .++.|+|+||+|++|.+++.
T Consensus 192 ~~--------------------------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~ 240 (267)
T PRK15080 192 PK--------------------------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEV 240 (267)
T ss_pred cC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHH
Confidence 42 247788999999999999999999864 57899999999999999999
Q ss_pred HHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 354 VSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 354 l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+++.|+.++..+.+|+.++|.|||++|
T Consensus 241 l~~~lg~~v~~~~~P~~~~a~Gaa~~~ 267 (267)
T PRK15080 241 FEKQTGLPVHKPQHPLFVTPLGIALSC 267 (267)
T ss_pred HHHHhCCCcccCCCchHHHHHHHHhhC
Confidence 999999999999999999999999875
No 58
>PRK14147 heat shock protein GrpE; Provisional
Probab=99.94 E-value=5.6e-27 Score=232.66 Aligned_cols=143 Identities=17% Similarity=0.236 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHH
Q psy5911 532 ELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFK 611 (1242)
Q Consensus 532 e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~ 611 (1242)
++.+++.++.. ++++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+.+...+..++.+|++||++
T Consensus 26 ~l~~l~~e~~e-lkd~~lR~~Ad~eN~rkR~~kE~e~~~~~a~~~~~~~lLpv~DnlerAl~~~~~~~~~l~~Gv~mi~k 104 (172)
T PRK14147 26 EVESLRSEIAL-VKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSLDAGLTAAGTEPSPLRDGLELTYK 104 (172)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccchHHHHHHHHHHHHH
Confidence 34444444433 46999999999999999999999999999999999999999999999998876556789999999999
Q ss_pred HHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 612 LIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 612 ~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
+|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.++|+| ...+.+ .-|+.|.+.
T Consensus 105 ~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~---~g~Vv~v~qkG------Y~l~~RvLRpA~V~Va 169 (172)
T PRK14147 105 QLLKVAADNGLTLLDPVGQPFNPEHHQAISQGEAEGVA---PGHVVQVFQKG------YLLNERLLRPALVVVA 169 (172)
T ss_pred HHHHHHHHCCCEEeCCCCCCCChHHhceeeeecCCCCC---cCEEEEEeeCC------cEeCCEeccCceEEeC
Confidence 99999999999999999999999999999987655544 66799999999 222333 337777654
No 59
>PRK14153 heat shock protein GrpE; Provisional
Probab=99.94 E-value=1.2e-26 Score=232.18 Aligned_cols=166 Identities=23% Similarity=0.337 Sum_probs=130.0
Q ss_pred CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcch
Q psy5911 506 GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPIT 585 (1242)
Q Consensus 506 ~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~ 585 (1242)
+|-+.++.+++.++.+ ....+. ++.+++.++. .++++|+|..||++|+|||+++|++++++||.++|+++||||+
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~~~~---ei~~l~~e~~-elkd~~lR~~AEfeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~ 93 (194)
T PRK14153 19 SGSSAEEAEELKEEPE-DSTADS---ETEKCREEIE-SLKEQLFRLAAEFDNFRKRTAREMEENRKFVLEQVLLDLLEVT 93 (194)
T ss_pred cCCCHHHHHHHhhhhh-cccchH---HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 4566677666654443 222222 2333344433 3469999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccCC--cchhhhHHHHHHHHHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 586 DSMEMFAKNFDS--NQTKESEIIFLIFKLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 586 d~~e~a~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
|||+||+++... +..++.+|++||+++|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.|+|+|
T Consensus 94 DnLerAl~~~~~~~~~~~l~~Gvemi~k~~~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~---~gtVi~V~qkG 170 (194)
T PRK14153 94 DNFERALESARTAEDMNSIVEGIEMVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVP---DNTIVDVCKPG 170 (194)
T ss_pred hHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChhHhceeeeeCCCCCC---cCEEEEEeeCC
Confidence 999999987653 3468999999999999999999999999999999999999999976655444 67799999999
Q ss_pred cceEEecCCCCc-ccceEEEEec
Q psy5911 664 KPQVIENSEGGR-TTPSVVGYTE 685 (1242)
Q Consensus 664 ~~~ii~~~~g~~-~~PS~v~~~~ 685 (1242)
= ..+.+ .-|+.|.+..
T Consensus 171 Y------~l~dRVLRPA~V~Vak 187 (194)
T PRK14153 171 Y------ALNSKVIRPAMVSVAR 187 (194)
T ss_pred c------EeCCEEeeCcEEEECC
Confidence 2 22223 3477777653
No 60
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.94 E-value=4.6e-25 Score=231.56 Aligned_cols=314 Identities=25% Similarity=0.351 Sum_probs=238.6
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC--Cc--EEEcHHHHHHhhhCCcchhhHHHHhcCCCCCC
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED--NR--IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 720 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~--~~--~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d 720 (1242)
.+|+|+||.|+.+.+-.+| ++.+ -||+|++... .. ..+|.+|+...-+.|.+..
T Consensus 8 diGIDLGTanTlV~~k~kg---IVl~------ePSVVAi~~~~~~~~v~aVG~eAK~MlGrTP~ni~------------- 65 (342)
T COG1077 8 DIGIDLGTANTLVYVKGKG---IVLN------EPSVVAIESEGKTKVVLAVGEEAKQMLGRTPGNIV------------- 65 (342)
T ss_pred cceeeecccceEEEEcCce---EEec------CceEEEEeecCCCceEEEehHHHHHHhccCCCCce-------------
Confidence 5799999999998776333 3333 4999999862 22 3489988755433333321
Q ss_pred hhHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhC-CCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 721 EIVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLN-EKIEKAVITVPAYFNDSQRQATKDAG 799 (1242)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~-~~~~~~VitVPa~~~~~qr~~~~~Aa 799 (1242)
..-.+.+..+...++...+|+|+.+......+ ....++++.||..-++-.|+++++|+
T Consensus 66 ---------------------aiRPmkdGVIAd~~~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~ea~ 124 (342)
T COG1077 66 ---------------------AIRPMKDGVIADFEVTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIKEAA 124 (342)
T ss_pred ---------------------EEeecCCcEeecHHHHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHHHHH
Confidence 11123345566778889999999888764333 34457999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+.||...+.++.||.|||+..++.-....+++ |||+||||+|++++.+.... ++....+||+.||+.+.+
T Consensus 125 ~~aGa~~V~lieEp~aAAIGaglpi~ep~G~m-vvDIGgGTTevaVISlggiv---------~~~Sirv~GD~~De~Ii~ 194 (342)
T COG1077 125 ESAGAREVYLIEEPMAAAIGAGLPIMEPTGSM-VVDIGGGTTEVAVISLGGIV---------SSSSVRVGGDKMDEAIIV 194 (342)
T ss_pred HhccCceEEEeccHHHHHhcCCCcccCCCCCE-EEEeCCCceeEEEEEecCEE---------EEeeEEEecchhhHHHHH
Confidence 99999999999999999999988766555564 45999999999999987521 122244699999999999
Q ss_pred HHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCce---e-eEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHH
Q psy5911 880 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ---T-DINLPYITADKNGPKHLNVKITRSKLESLVEDLIS 955 (1242)
Q Consensus 880 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~---~-~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~ 955 (1242)
|+.++|+--.+ ...+|++|......-. . ...++....+.-.+..-.++++-+++.+.+++.++
T Consensus 195 yvr~~~nl~IG-------------e~taE~iK~eiG~a~~~~~~~~~~~eV~Grdl~~GlPk~i~i~s~ev~eal~~~v~ 261 (342)
T COG1077 195 YVRKKYNLLIG-------------ERTAEKIKIEIGSAYPEEEDEELEMEVRGRDLVTGLPKTITINSEEIAEALEEPLN 261 (342)
T ss_pred HHHHHhCeeec-------------HHHHHHHHHHhcccccccCCccceeeEEeeecccCCCeeEEEcHHHHHHHHHHHHH
Confidence 99999886555 3468899988764322 1 12222222233334556789999999999999999
Q ss_pred HHHHHHHHHHHhcCCC--ccCcce-EEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhc
Q psy5911 956 KSLKPCEVALNDAKID--KSKISE-IILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 956 ~~~~~i~~~l~~~~~~--~~~i~~-ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
.|.+.++..|+..... .+-++. ++|+||+|.+..+.+.|++..+.++....+|-.|||.|+......+.
T Consensus 262 ~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD~~i~~et~~pv~ia~~pL~~Va~G~G~~le~~~ 333 (342)
T COG1077 262 GIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLDRLLSEETGVPVIIADDPLTCVAKGTGKALEALD 333 (342)
T ss_pred HHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCchHhHHhccCCeEEECCChHHHHHhccchhhhhhH
Confidence 9999999999986533 222555 99999999999999999999999999999999999999988776543
No 61
>PRK14145 heat shock protein GrpE; Provisional
Probab=99.94 E-value=1.6e-26 Score=231.19 Aligned_cols=117 Identities=26% Similarity=0.351 Sum_probs=107.4
Q ss_pred HHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHHHHHHHHHhccc
Q psy5911 543 ILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFKLIKKFYKKFNI 622 (1242)
Q Consensus 543 ~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 622 (1242)
.+.++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+++.. +..++.+|++||+++|.++|+++||
T Consensus 63 el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~e~~~~~LLpV~DnLerAl~~~~-~~~~l~~Gv~mi~k~l~~vL~k~GV 141 (196)
T PRK14145 63 EYLDIAQRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSG-DYNSLKEGIELIYRQFKKILDKFGV 141 (196)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 356999999999999999999999999999999999999999999999998843 3467899999999999999999999
Q ss_pred eecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 623 KQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 623 ~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
++|++.|++|||++||||++.+..+.+ .++++.|+|+|
T Consensus 142 e~I~~~Ge~FDP~~HEAv~~~~~~~~~---~gtVv~V~qkG 179 (196)
T PRK14145 142 KEIEAEGQIFDPYKHHAVMQEEVEGKQ---PNEIIEVFQKG 179 (196)
T ss_pred EEeCCCCCCCCchhhheeeeeCCCCCC---cCEEEEEeeCC
Confidence 999999999999999999987665554 67799999999
No 62
>PRK14161 heat shock protein GrpE; Provisional
Probab=99.94 E-value=3.9e-26 Score=227.11 Aligned_cols=141 Identities=20% Similarity=0.250 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc----chhhhHHHHHH
Q psy5911 534 VKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN----QTKESEIIFLI 609 (1242)
Q Consensus 534 ~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~----~~~~~~g~~~~ 609 (1242)
.+++.+++ .++++|+|..||++|+|||+++|++++++||.++|+++||||+|||+||+.+.+.+ ..++.+|++||
T Consensus 29 ~~l~~e~~-elkd~~lR~~AefeN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~~~~~~~~~~~Gv~mi 107 (178)
T PRK14161 29 TALKAEIE-ELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSRALAHKPANSDVEVTNIIAGVQMT 107 (178)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcCccccchhHHHHHHHHHHH
Confidence 33444443 34699999999999999999999999999999999999999999999999986543 24789999999
Q ss_pred HHHHHHHHHhccceeccc-CCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 610 FKLIKKFYKKFNIKQISE-TGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 610 ~~~~~~~~~~~g~~~i~~-~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
+++|.++|+++||++|++ .|++|||++||||++.+..+.+ .++++.|+|+| ...+++ .-|+.|...
T Consensus 108 ~k~l~~vL~~~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~---~gtVi~v~q~G------Y~l~dRVLRpA~V~Va 175 (178)
T PRK14161 108 KDELDKVFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHA---PNSIITLMQSG------YKIRDRLLRPATVQVV 175 (178)
T ss_pred HHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeeCCCCCC---cCEEEEEeeCC------cEeCCEeecCceEEeC
Confidence 999999999999999998 6999999999999987655444 67799999999 222333 337777654
No 63
>PRK14139 heat shock protein GrpE; Provisional
Probab=99.94 E-value=2.2e-26 Score=229.02 Aligned_cols=141 Identities=25% Similarity=0.384 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFKL 612 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~~ 612 (1242)
+.+++.++. .++++|+|..||++|+|||+++|++++++|+.++|+++||||+|||+||+.+.+.+..++.+|++||+++
T Consensus 41 l~~le~e~~-elkd~~lR~~AefeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~~~~~l~~Gv~mi~k~ 119 (185)
T PRK14139 41 LAEAEAKAA-ELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAALADESGDLEKLREGVELTLKQ 119 (185)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 334444443 3579999999999999999999999999999999999999999999999988766667899999999999
Q ss_pred HHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 613 IKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 613 ~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
|.++|+++||++|++.|++|||++||||++.+. +. ..++++.|+|+| ...+++ .-|+.|.+.
T Consensus 120 l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~-~~---~~gtVi~V~qkG------Y~l~dRVLRPA~V~Va 182 (185)
T PRK14139 120 LTSAFEKGRVVEINPVGEKFDPHQHQAISMVPA-EQ---EPNTVVAVLQKG------YTIADRVLRPALVTVA 182 (185)
T ss_pred HHHHHHHCCCceeCCCCCCCChHHhheeeeecC-CC---CcCEEEEEeeCC------cEeCCEeccCceEEeC
Confidence 999999999999999999999999999997664 32 467899999999 222333 347777654
No 64
>PRK14159 heat shock protein GrpE; Provisional
Probab=99.94 E-value=2.8e-26 Score=226.79 Aligned_cols=116 Identities=21% Similarity=0.218 Sum_probs=105.9
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc--chhhhHHHHHHHHHHHHHHHhcc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN--QTKESEIIFLIFKLIKKFYKKFN 621 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~g 621 (1242)
++++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+++...+ ..++.+|++||+++|.++|+++|
T Consensus 42 lkd~~lR~~AdfeN~rkR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~~~~~~l~~Gv~mi~k~l~~vL~k~G 121 (176)
T PRK14159 42 LKDKYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECHDEISLKIKEGVQNTLDLFLKKLEKHG 121 (176)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHCc
Confidence 4689999999999999999999999999999999999999999999999876543 35789999999999999999999
Q ss_pred ceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 622 IKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 622 ~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
|++|++.| +|||++||||++.+..+.+ .++++.|+|+|
T Consensus 122 v~~I~~~G-~FDP~~HEAv~~~~~~~~~---~gtVv~v~qkG 159 (176)
T PRK14159 122 VALIKEEK-EFDPNLHEAMFHVDSENHQ---SGEVVQVLQKG 159 (176)
T ss_pred CEecCCCC-CCChHHhhhhheeCCCCCC---cCeEEEEeeCC
Confidence 99999999 6999999999987765544 67799999999
No 65
>PRK14151 heat shock protein GrpE; Provisional
Probab=99.94 E-value=2.8e-26 Score=228.16 Aligned_cols=127 Identities=17% Similarity=0.305 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc---chhhhHHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN---QTKESEIIFLI 609 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~---~~~~~~g~~~~ 609 (1242)
+.+++.++. .++++|+|..||++|+|||+++|++++++|+.++|+++||||+||||||+++...+ ..++.+|++||
T Consensus 29 i~~le~e~~-el~d~~lR~~Ae~eN~rkR~~kE~e~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~~~~~~~~~~Gv~mi 107 (176)
T PRK14151 29 VQELEEQLA-AAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERGLELSSADDEAIKPMREGVELT 107 (176)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccccchhHHHHHHHHHHH
Confidence 344444443 34689999999999999999999999999999999999999999999999875432 35789999999
Q ss_pred HHHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 610 FKLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 610 ~~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
+++|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.|+|+|
T Consensus 108 ~k~l~~~L~k~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~---~gtI~~v~qkG 158 (176)
T PRK14151 108 LKMFQDTLKRYQLEAVDPHGEPFNPEHHQAMAMQESADVE---PNSVLKVFQKG 158 (176)
T ss_pred HHHHHHHHHHCCCEEeCCCCCCCCHHHhhcceeeCCCCCC---cCeEEEEeeCC
Confidence 9999999999999999999999999999999987665544 67799999999
No 66
>PRK14162 heat shock protein GrpE; Provisional
Probab=99.94 E-value=2.5e-26 Score=230.36 Aligned_cols=118 Identities=17% Similarity=0.273 Sum_probs=106.6
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc--chhhhHHHHHHHHHHHHHHHhcc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN--QTKESEIIFLIFKLIKKFYKKFN 621 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~g 621 (1242)
++++|+|.+||++|+|||+++|++++++||+++|+++||||+|||+||+.+...+ ..++.+|++||+++|.++|+++|
T Consensus 58 lkd~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~~~~~~l~~Gvemi~k~l~~vL~~~G 137 (194)
T PRK14162 58 LEDKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAVKADDEAAKQLKKGVQMTLDHLVKALKDHG 137 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5699999999999999999999999999999999999999999999999876543 36799999999999999999999
Q ss_pred ceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 622 IKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 622 ~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
|++|++.|++|||++||||++.+.. +....++++.|+|+|
T Consensus 138 V~~I~~~G~~FDP~~HEAv~~~~~~--~~~~~gtVv~v~qkG 177 (194)
T PRK14162 138 VTEIKADGEKFDPTLHQAVQTVAAE--NDDQKDHVVQVLQKG 177 (194)
T ss_pred CEEeCCCCCCCChhHhhhheeecCC--CCCCcCEEEEEeeCC
Confidence 9999999999999999999976542 122367899999999
No 67
>PRK14155 heat shock protein GrpE; Provisional
Probab=99.94 E-value=3.3e-26 Score=232.72 Aligned_cols=144 Identities=15% Similarity=0.204 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc-----chhhhHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN-----QTKESEIIF 607 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~-----~~~~~~g~~ 607 (1242)
+.+++.++. .++++|+|..||++|+|||+++|++++++|++++|+++||||+||||||+.+...+ ..++.+|++
T Consensus 22 l~~le~e~~-elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~~~~~~~~~i~~Gve 100 (208)
T PRK14155 22 IEALKAEVA-ALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKDSADPAVKNFIIGVE 100 (208)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHhcccccccchHHHHHHHHHH
Confidence 334444443 34699999999999999999999999999999999999999999999999986532 357899999
Q ss_pred HHHHHHHHHHHhccceeccc-CCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCC-CcccceEEEEec
Q psy5911 608 LIFKLIKKFYKKFNIKQISE-TGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEG-GRTTPSVVGYTE 685 (1242)
Q Consensus 608 ~~~~~~~~~~~~~g~~~i~~-~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g-~~~~PS~v~~~~ 685 (1242)
||+++|.++|+++||++|++ .|++|||++||||++.+..+.+ .++++.|+|+|= ..+ +-.-|+.|.+..
T Consensus 101 mi~k~~~~~L~k~GV~~I~~~~G~~FDP~~HEAv~~~~~~~~~---~gtVi~V~qkGY------~l~dRVLRPA~V~Vak 171 (208)
T PRK14155 101 MTEKELLGAFERNGLKKIDPAKGDKFDPHLHQAMMEQPSTEVA---AGGVLQVMQAGY------ELMGRLVRPAMVAVAA 171 (208)
T ss_pred HHHHHHHHHHHHCCCceecCCCCCCCChhHhceeeeecCCCCC---cCeEEEEeeCCe------EeCCEeeccceEEECC
Confidence 99999999999999999998 7999999999999987765555 677999999992 222 334488888864
Q ss_pred C
Q psy5911 686 D 686 (1242)
Q Consensus 686 ~ 686 (1242)
.
T Consensus 172 ~ 172 (208)
T PRK14155 172 K 172 (208)
T ss_pred C
Confidence 3
No 68
>PRK14141 heat shock protein GrpE; Provisional
Probab=99.94 E-value=2.9e-26 Score=232.28 Aligned_cols=143 Identities=17% Similarity=0.286 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC--------cchhhhH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS--------NQTKESE 604 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~--------~~~~~~~ 604 (1242)
+.+++.++. .++++|+|.+||++|+|||+++|++++++||+++|+++||||+||||||+++... ...++.+
T Consensus 40 i~~le~e~~-elkd~~lR~~Ae~eN~RKR~~kE~e~~~~~a~~~~~~dLLpViDnLerAl~~~~~~~~~~~~~~~~~l~e 118 (209)
T PRK14141 40 LEALKAENA-ELKDRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRALDAIPAEARAAADAGLKALIE 118 (209)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhccccccccccchhHHHHHH
Confidence 333333433 3468999999999999999999999999999999999999999999999987543 2357999
Q ss_pred HHHHHHHHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEE
Q psy5911 605 IIFLIFKLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGY 683 (1242)
Q Consensus 605 g~~~~~~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~ 683 (1242)
|++||+++|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.|+|+| ...+.+ .-|+.|.+
T Consensus 119 Gv~mi~k~l~~vLek~GV~~I~~~Ge~FDP~~HEAv~~~~~~~~~---~gtVv~V~qkG------Y~l~dRVLRpA~V~V 189 (209)
T PRK14141 119 GVEMTERAMLNALERHGVKKLDPEGQKFDPNFHQAMFEVPNPDVP---NNTVVQVVQAG------YTIGERVLRPAMVGV 189 (209)
T ss_pred HHHHHHHHHHHHHHHCCCEEECCCCCCCChHHhceeeeecCCCCC---cCEEEEEeeCC------cEeCCEeecccEEEE
Confidence 999999999999999999999999999999999999976654443 67899999999 222333 34888877
Q ss_pred ec
Q psy5911 684 TE 685 (1242)
Q Consensus 684 ~~ 685 (1242)
..
T Consensus 190 sk 191 (209)
T PRK14141 190 AK 191 (209)
T ss_pred CC
Confidence 64
No 69
>PRK10325 heat shock protein GrpE; Provisional
Probab=99.93 E-value=4.3e-26 Score=232.10 Aligned_cols=132 Identities=23% Similarity=0.344 Sum_probs=115.0
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC---cchhhhHHHHHHHHHHHHHHHhc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS---NQTKESEIIFLIFKLIKKFYKKF 620 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~ 620 (1242)
++++|+|..|+++|+|||+++|++++++||.++|+++||||+||||||+++.+. ...++.+|++||+++|.++|+++
T Consensus 58 ~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~lLpv~DnlerAl~~~~~~~~~~~~l~~Gv~m~~~~l~~~L~~~ 137 (197)
T PRK10325 58 ERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEGIELTLKSMLDVVRKF 137 (197)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHC
Confidence 468999999999999999999999999999999999999999999999987542 34689999999999999999999
Q ss_pred cceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 621 NIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 621 g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
||++|++.|++|||++||||++.+..+.+ .++++.|+|+| ...+.+ .-|+.|.+.
T Consensus 138 Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~---~~~Vv~v~qkG------Y~l~drvlRpA~V~Vs 193 (197)
T PRK10325 138 GVEVIAETNVPLDPNVHQAIAMVESDDVA---PGNVLGIMQKG------YTLNGRTIRAAMVTVA 193 (197)
T ss_pred cCeeeCCCCCCCChhHhceeeeeCCCCCC---cCeEEEEeeCC------cEeCCEeccCceEEeC
Confidence 99999999999999999999987665554 67799999999 222333 347777664
No 70
>PRK14158 heat shock protein GrpE; Provisional
Probab=99.93 E-value=4.2e-26 Score=228.79 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=107.1
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC-cchhhhHHHHHHHHHHHHHHHhccc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS-NQTKESEIIFLIFKLIKKFYKKFNI 622 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~ 622 (1242)
++++|+|..||++|+|||+++|++++++||.++|+++||||+||||||+.+.+. +..++.+|++||+++|.++|+++||
T Consensus 59 l~d~~lR~~AefeN~RkR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~~~~~~i~~Gv~mi~k~l~~vLek~Gv 138 (194)
T PRK14158 59 NWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERALDHADEESMSAIIEGIRMTLSMLLSTLKKFGV 138 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 469999999999999999999999999999999999999999999999987654 3467999999999999999999999
Q ss_pred eeccc-CCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 623 KQISE-TGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 623 ~~i~~-~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
++|++ .|++|||++||||++.+..+.+ .++|+.|+|+|
T Consensus 139 ~~I~~~~G~~FDP~~HEAv~~~~~~~~~---~gtVv~v~qkG 177 (194)
T PRK14158 139 TPVEAEKGTPFDPAYHQAMCQVESAEQE---PNTVVAVFQKG 177 (194)
T ss_pred EEecCCCCCCCChHHhhhheeecCCCCC---cCEEEEEeeCC
Confidence 99997 7999999999999976654444 67899999999
No 71
>PRK14163 heat shock protein GrpE; Provisional
Probab=99.93 E-value=7e-26 Score=228.81 Aligned_cols=138 Identities=22% Similarity=0.264 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFKL 612 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~~ 612 (1242)
+.+++.++. .++++|+|..||++|+|||++||++++++|+.++|+++||||+|||+||+.+. .+.+|++||+++
T Consensus 49 l~~l~~e~~-el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~-----~l~~Gv~mi~k~ 122 (214)
T PRK14163 49 LDQVRTALG-ERTADLQRLQAEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRAREHG-----ELVGGFKSVAES 122 (214)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhch-----hHHHHHHHHHHH
Confidence 344444443 34699999999999999999999999999999999999999999999999874 488999999999
Q ss_pred HHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEec
Q psy5911 613 IKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYTE 685 (1242)
Q Consensus 613 ~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~~ 685 (1242)
|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.|+|+| ...+.| .-|+.|.+..
T Consensus 123 l~~~L~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~---~gtVv~v~qkG------Y~l~~RVLRPA~V~Vsk 187 (214)
T PRK14163 123 LETTVAKLGLQQFGKEGEPFDPTIHEALMHSYAPDVT---ETTCVAILQPG------YRIGERTIRPARVAVAE 187 (214)
T ss_pred HHHHHHHCCCEEeCCCCCCCChhHhceeeeecCCCCC---cCEEEEEeeCC------cCcCCEeccCceEEECC
Confidence 9999999999999999999999999999987665554 67799999999 233333 3488887764
No 72
>PRK14140 heat shock protein GrpE; Provisional
Probab=99.93 E-value=5e-26 Score=227.63 Aligned_cols=117 Identities=16% Similarity=0.225 Sum_probs=107.3
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc--chhhhHHHHHHHHHHHHHHHhcc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN--QTKESEIIFLIFKLIKKFYKKFN 621 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~g 621 (1242)
++++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+++.+.+ ..++.+|++||+++|.++|+++|
T Consensus 56 lkd~~lR~~Ae~eN~rkR~~rE~~~~~~~a~~~~~~~LLpvlDnLerAl~~~~~~~~~~~i~~Gv~mi~k~l~~~L~k~G 135 (191)
T PRK14140 56 LEERYLRLQADFENYKRRIQKENEAAEKYRAQSLASDLLPALDNFERALQIEADDEQTKSLLKGVEMVHRQLLEALKKEG 135 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5799999999999999999999999999999999999999999999999976543 36789999999999999999999
Q ss_pred ceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 622 IKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 622 ~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
|++|++.|++|||++||||++.+..+. ..++++.|+|+|
T Consensus 136 V~~i~~~Ge~FDP~~HEAv~~~~~~~~---~~gtVv~V~qkG 174 (191)
T PRK14140 136 VEVIEAVGEQFDPNLHQAVMQDEDEDF---ESNEVVEELQKG 174 (191)
T ss_pred CEeeCCCCCCCChHHhccceeeCCCCC---CcCeEEEEeeCC
Confidence 999999999999999999997665444 467799999999
No 73
>PRK14150 heat shock protein GrpE; Provisional
Probab=99.93 E-value=7.2e-26 Score=229.69 Aligned_cols=118 Identities=21% Similarity=0.321 Sum_probs=107.5
Q ss_pred HHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC---cchhhhHHHHHHHHHHHHHHHh
Q psy5911 543 ILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS---NQTKESEIIFLIFKLIKKFYKK 619 (1242)
Q Consensus 543 ~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~---~~~~~~~g~~~~~~~~~~~~~~ 619 (1242)
.++++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+++... ...++.+|++||+++|.++|++
T Consensus 56 ~~kd~~lR~~AefeN~rkR~~kE~~~~~~~a~~~~~~~lL~v~DnlerAl~~~~~~~~~~~~~~~Gv~mi~~~l~~~L~~ 135 (193)
T PRK14150 56 EERDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQAADKENEALKALIEGVELTLKSLLDTVAK 135 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999999999999999999999999986542 2367999999999999999999
Q ss_pred ccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 620 FNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 620 ~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
+||++|++.|++|||++||||++.+..+.+ .++++.|+|+|
T Consensus 136 ~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~---~gtI~~v~q~G 176 (193)
T PRK14150 136 FGVEVVGPVGEPFNPEVHQAISMQESEDHE---PNTVMMVMQKG 176 (193)
T ss_pred CCCeeeCCCCCCCCHhHcceeeeeCCCCCC---cCEEEEEeeCC
Confidence 999999999999999999999987665544 67799999999
No 74
>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=7.8e-26 Score=230.29 Aligned_cols=143 Identities=20% Similarity=0.312 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcc---hhhhHHHHH
Q psy5911 532 ELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQ---TKESEIIFL 608 (1242)
Q Consensus 532 e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~---~~~~~g~~~ 608 (1242)
++.++++++++ +++.|+|..|+++|+|||++++++++++||+++|+.+||||+|||||||.+.+.+. .++.+|++|
T Consensus 44 ~i~~Le~q~~e-~~~~~lr~~Ae~eN~rkR~~re~e~~~k~a~e~~~~dlLpviDnlerAl~~~~~~~d~~~~l~~Gvem 122 (193)
T COG0576 44 EIAELEAQLEE-LKDKYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDDKDPEKALLEGVEM 122 (193)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 44555555544 56999999999999999999999999999999999999999999999988754422 369999999
Q ss_pred HHHHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 609 IFKLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 609 ~~~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
|+++|.++|.++||++|++.|+.|||++||||++.+..+. ..++++.|+|+| ...++| .-|+.|...
T Consensus 123 ~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~~~~---~~~tVv~v~qkG------Y~l~dRVLRpA~V~Va 190 (193)
T COG0576 123 TLDQLLDALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDV---EPNTVVEVLQKG------YKLNDRVLRPAMVKVA 190 (193)
T ss_pred HHHHHHHHHHHCCCEEeCCCCCCCCHHHhhheeeecCCCC---CCCeEEEEeecC------eeeCCEeccceEEEEe
Confidence 9999999999999999999999999999999997655444 478899999999 222333 448888765
No 75
>PRK14144 heat shock protein GrpE; Provisional
Probab=99.93 E-value=9.3e-26 Score=225.78 Aligned_cols=131 Identities=27% Similarity=0.365 Sum_probs=113.2
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc-chhhhHHHHHHHHHHHHHHHhccc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN-QTKESEIIFLIFKLIKKFYKKFNI 622 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~g~ 622 (1242)
++++|+|..|+++|+|||+++|++++++||+++|+++||||+|||+||+.+...+ ..++.+|++||+++|.++|+++||
T Consensus 64 lkdk~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~~~~~i~~Gv~mi~k~l~~~L~k~GV 143 (199)
T PRK14144 64 NWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSLEQALQLADKNSDPSMHEGLELTMKLFLDALQKFDV 143 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHcccccchhHHHHHHHHHHHHHHHHHHHCCC
Confidence 4699999999999999999999999999999999999999999999999876542 357899999999999999999999
Q ss_pred eecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEE
Q psy5911 623 KQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGY 683 (1242)
Q Consensus 623 ~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~ 683 (1242)
++|++.|++|||++||||++.+..+.+ .++++.|+|+| ...+.+ .-|+.|.+
T Consensus 144 ~~I~~~G~~FDP~~HEAv~~~~~~~~~---~gtVv~V~qkG------Y~l~dRVLRpA~V~V 196 (199)
T PRK14144 144 EQIDPLGQTFDPQQHEAMSMQPAPGAP---PNSVITVFQKG------YKLSDRVIRPARVIV 196 (199)
T ss_pred EEeCCCCCCCChhHhceeeeeCCCCCC---cCeEEEEeeCC------cEECCEEecccEEEe
Confidence 999999999999999999987665444 67799999999 222233 33776655
No 76
>PRK14146 heat shock protein GrpE; Provisional
Probab=99.93 E-value=1.2e-25 Score=230.41 Aligned_cols=147 Identities=14% Similarity=0.158 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC--cchhhhHHHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS--NQTKESEIIFLIF 610 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~--~~~~~~~g~~~~~ 610 (1242)
+.+++.++. .++++|+|..|+++|+|||+++|++++++||+++|+++||||+|||+||+.+... +..++.+|++||+
T Consensus 63 l~~l~~e~~-el~d~~lR~~AdfeN~rkR~~kE~e~~~~~a~e~~~~~lLpv~DnlerAl~~~~~~~~~~~l~~Gv~mi~ 141 (215)
T PRK14146 63 LDNAKKEIE-SLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERVGATQNQSEELKPFVEGVKMIL 141 (215)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccccchhhHHHHHHHHHH
Confidence 344444443 3569999999999999999999999999999999999999999999999987543 3467999999999
Q ss_pred HHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecC-CCCcccceEEEEec
Q psy5911 611 KLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENS-EGGRTTPSVVGYTE 685 (1242)
Q Consensus 611 ~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~-~g~~~~PS~v~~~~ 685 (1242)
++|.++|+++||++|++.|++|||++||||++.+..+.+ .++++.|+|+|- .+... ++.-.-|+.|.+..
T Consensus 142 k~l~~~L~k~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~---~g~Vv~v~qkGY--~l~~r~~~RvLRpA~V~Vak 212 (215)
T PRK14146 142 KEFYSVLEKSNVIRFDPKGEPFDPMSMEALSSEEGDQYS---EETVIDVYQAGY--YYKENEDKFTLRPARVRIGK 212 (215)
T ss_pred HHHHHHHHHCcCeeeCCCCCCCChhHhceeeeecCCCCC---cCEEEEEeeCCe--EeCCccCCeeccCceEEeCC
Confidence 999999999999999999999999999999987665554 677999999992 12110 11245588887653
No 77
>PRK14160 heat shock protein GrpE; Provisional
Probab=99.93 E-value=1.3e-25 Score=227.49 Aligned_cols=115 Identities=23% Similarity=0.295 Sum_probs=105.6
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHHHHHHHHHhccce
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFKLIKKFYKKFNIK 623 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 623 (1242)
++++|+|..|+++|+|||++|+++++++||.++|+++||||+|||+||+++... ..++++|++||+++|.++|+++||+
T Consensus 80 lkd~~lR~~AefeN~RKR~~kE~e~~~~~a~e~~~~~LLpVlDnLerAl~~~~~-~~~l~~Gv~mi~kql~~vL~k~GVe 158 (211)
T PRK14160 80 LKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVLDNLERAAAVEGS-VEDLKKGIEMTVKQFKTSLEKLGVE 158 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHCCCE
Confidence 579999999999999999999999999999999999999999999999987443 3579999999999999999999999
Q ss_pred ecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 624 QISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 624 ~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
+|++.| +|||++||||++.+..+.+ .++++.|+|+|
T Consensus 159 ~I~~~G-~FDP~~HEAv~~~~~~e~~---~gtVveV~qkG 194 (211)
T PRK14160 159 EISTEG-EFDPNLHNAVMHVEDENYG---ENEIVEVFQKG 194 (211)
T ss_pred EeCCCC-CCChHHhceeeeeCCCCCC---cCeEEEEeeCC
Confidence 999999 8999999999987655444 67799999999
No 78
>PRK14154 heat shock protein GrpE; Provisional
Probab=99.93 E-value=1e-25 Score=227.17 Aligned_cols=128 Identities=18% Similarity=0.270 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC---cchhhhHHHHH
Q psy5911 532 ELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS---NQTKESEIIFL 608 (1242)
Q Consensus 532 e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~---~~~~~~~g~~~ 608 (1242)
++.++++++. .++++|+|..||++|+|||++||++++++||.++|+++||||+|||+||+.+... ...++.+||+|
T Consensus 60 el~~le~e~~-elkd~~lRl~ADfeNyRKR~~kE~e~~~~~a~e~~~~~LLpVlDnLeRAL~~~~~~~~~~~~l~eGvem 138 (208)
T PRK14154 60 QLTRMERKVD-EYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPASEDPQVKSMRDGMSL 138 (208)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccccchhHHHHHHHHHH
Confidence 3344444443 3469999999999999999999999999999999999999999999999986432 24689999999
Q ss_pred HHHHHHHHHHhccceeccc-CCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 609 IFKLIKKFYKKFNIKQISE-TGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 609 ~~~~~~~~~~~~g~~~i~~-~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
|+++|.++|+++||++|++ .|++|||++||||++.+..+.+ .++++.|+|+|
T Consensus 139 i~k~l~~vL~k~GVe~I~~~~G~~FDP~~HEAv~~~~~~~~~---~gtVveV~qkG 191 (208)
T PRK14154 139 TLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQAVPDAK---PDTIIQVLQKG 191 (208)
T ss_pred HHHHHHHHHHHCCCEEecCCCCCCCChhHhheeeeeCCCCCC---cCEEEEEeeCC
Confidence 9999999999999999998 5999999999999976655544 56799999999
No 79
>PRK14149 heat shock protein GrpE; Provisional
Probab=99.93 E-value=1.5e-25 Score=223.23 Aligned_cols=141 Identities=19% Similarity=0.229 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC--cchhhhHHHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS--NQTKESEIIFLIF 610 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~--~~~~~~~g~~~~~ 610 (1242)
+.+++.++. .++++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+.+... +..++.+|++||+
T Consensus 45 ~~~l~~e~~-elkd~~lR~~AefEN~rKR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~~~~~~~l~~Gv~mi~ 123 (191)
T PRK14149 45 KEDFELKYK-EMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGALKSAAEVDKESALTKGLELTM 123 (191)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccccchHHHHHHHHHHH
Confidence 344444443 3469999999999999999999999999999999999999999999999987654 3357999999999
Q ss_pred HHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 611 KLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 611 ~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
++|.++|+++||++|++.| +|||++||||++.+..+. ..++++.|+|+|= ..+.+ .-|+.|...
T Consensus 124 k~l~~vL~k~GV~~I~~~G-~FDP~~HEAv~~v~~~~~---~~gtVv~V~QkGY------~l~dRVLRPA~V~Va 188 (191)
T PRK14149 124 EKLHEVLARHGIEGIECLE-EFDPNFHNAIMQVKSEEK---ENGKIVQVLQQGY------KYKGRVLRPAMVSIA 188 (191)
T ss_pred HHHHHHHHHCCCEEeCCCC-CCChHHhheeeeecCCCC---CcCEEEEEeeCCc------EeCCEEeeccEEEeC
Confidence 9999999999999999998 599999999997665443 4678999999992 22233 337777664
No 80
>PRK14143 heat shock protein GrpE; Provisional
Probab=99.92 E-value=4.7e-25 Score=229.19 Aligned_cols=133 Identities=17% Similarity=0.284 Sum_probs=115.0
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC---cchhhhHHHHHHHHHHHHHHHhc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS---NQTKESEIIFLIFKLIKKFYKKF 620 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~ 620 (1242)
++++|+|..|+++|+|||++||++++++||+++|+++||||+|||+||+.+... ....+.+|++||+++|.++|+++
T Consensus 86 lkd~~lR~~AdfeN~RKR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~~~~~~~~l~~Gve~i~k~l~~~L~k~ 165 (238)
T PRK14143 86 LNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERARQQLKPEGEEAQALHRSYQGLYKQLVDVLKRL 165 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHC
Confidence 468999999999999999999999999999999999999999999999987543 23578999999999999999999
Q ss_pred cceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEec
Q psy5911 621 NIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYTE 685 (1242)
Q Consensus 621 g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~~ 685 (1242)
||++|++.|++|||++||||++.+..+.+ .++++.++|+| ...+.| .-|+.|....
T Consensus 166 GV~~i~~~G~~FDP~~HEAv~~~~~~~~~---~gtVv~v~qkG------Y~l~~RVLRpA~V~Vsk 222 (238)
T PRK14143 166 GVSPMRVVGQEFDPNLHEAVLREPSDEHP---EDVVLEELQRG------YHLGGRVLRHAMVKVSM 222 (238)
T ss_pred CCeeeCCCCCCCChHHhheeeeecCCCCC---cCeEEEEeeCC------ceeCCEecccceEEECC
Confidence 99999999999999999999987765554 67799999999 222333 3477777753
No 81
>PRK14157 heat shock protein GrpE; Provisional
Probab=99.92 E-value=1.1e-24 Score=221.08 Aligned_cols=141 Identities=18% Similarity=0.256 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHH
Q psy5911 529 KFEELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFL 608 (1242)
Q Consensus 529 ~~~e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~ 608 (1242)
...++.+++.++.+ ++++|+|..||++|+|||++||++++++|++++|+++||||+|||+||+.+.. +.+|++|
T Consensus 82 ~~~~l~~le~e~~e-~kd~llR~~AEfeNyRKR~~rE~e~~~~~a~~~~~~dLLpvlDnLeRAl~~~~-----~~~~~~~ 155 (227)
T PRK14157 82 TLTPLGQAKKEAAE-YLEALQRERAEFINYRNRTQKEQDRFRQHGIIDVLTALLPALDDIDRIREHSE-----MDDSFKA 155 (227)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhccc-----cchHHHH
Confidence 34455555555544 46999999999999999999999999999999999999999999999998753 4579999
Q ss_pred HHHHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 609 IFKLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 609 ~~~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
|+++|.++|+++||++|++.|++|||++||||++.+..+.. .++|+.|+|+| ...+.| .-|+.|.+.
T Consensus 156 i~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAV~~~~~~~~~---~gtVi~V~QkG------Y~l~dRVLRPA~V~Va 223 (227)
T PRK14157 156 VAAKIDKAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAE---KETVDTVVEAG------YRIGDRVIRAARVVVA 223 (227)
T ss_pred HHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCC---cCEEEEEeeCC------ceeCCEeccCceEEeC
Confidence 99999999999999999999999999999999987665544 57799999999 222333 347777664
No 82
>PRK14156 heat shock protein GrpE; Provisional
Probab=99.91 E-value=4.1e-24 Score=211.22 Aligned_cols=126 Identities=13% Similarity=0.193 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHH
Q psy5911 532 ELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFK 611 (1242)
Q Consensus 532 e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~ 611 (1242)
++.+++.++. .++++|+|..|+++|+|||+++|++++++||.++|+++||||+|||+||+++... ..++.+|++||++
T Consensus 35 ~l~~l~~e~~-elkd~~lR~~AEfeN~rKR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~-~~~l~~Gv~mi~k 112 (177)
T PRK14156 35 ELELANERAD-EFENKYLRAHAEMQNIQRRANEERQQLQRYRSQDLAKAILPSLDNLERALAVEGL-TDDVKKGLEMVQE 112 (177)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhCccc-chhHHHHHHHHHH
Confidence 3344444443 3569999999999999999999999999999999999999999999999987543 3578999999999
Q ss_pred HHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 612 LIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 612 ~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
+|.++|+++||++|++. +|||++||||++.+.. +....++++.++|+|
T Consensus 113 ~l~~~L~~~GV~~i~~~--~FDP~~HEAv~~~~~~--~~~~~gtVv~V~qkG 160 (177)
T PRK14156 113 SLIQALKEEGVEEVAVD--SFDHNLHMAVQTLPAD--DEHPADSIAQVFQKG 160 (177)
T ss_pred HHHHHHHHCCCeecCCC--CCChhHhhcceeecCC--CCCCcCEEEEEeeCC
Confidence 99999999999999985 9999999999975532 112367899999999
No 83
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.91 E-value=3.1e-23 Score=228.00 Aligned_cols=202 Identities=24% Similarity=0.354 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEE
Q psy5911 754 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVV 833 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV 833 (1242)
.+.....|+++++.++.+++.++..++++||++|+..+|+++.+|++.||+++..+++||.|++.+|.... .+|
T Consensus 66 i~~a~~~i~~~~~~ae~~~g~~i~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~~~~------~~v 139 (267)
T PRK15080 66 FIGAVTIVRRLKATLEEKLGRELTHAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLGIDN------GAV 139 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhCCCC------cEE
Confidence 57778899999999999989889999999999999999999999999999999999999999999886531 478
Q ss_pred EeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhh
Q psy5911 834 YDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIE 913 (1242)
Q Consensus 834 ~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ 913 (1242)
+|+||||||+++++-.. + .. .++..+||++||+.|.+++. .+ +.+||++|+.
T Consensus 140 vDIGggtt~i~v~~~g~------~--~~-~~~~~~GG~~it~~Ia~~l~--------i~-----------~~eAE~lK~~ 191 (267)
T PRK15080 140 VDIGGGTTGISILKDGK------V--VY-SADEPTGGTHMSLVLAGAYG--------IS-----------FEEAEQYKRD 191 (267)
T ss_pred EEeCCCcEEEEEEECCe------E--EE-EecccCchHHHHHHHHHHhC--------CC-----------HHHHHHHHhc
Confidence 89999999999985322 2 22 24678999999999987752 11 4678888886
Q ss_pred ccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHH
Q psy5911 914 LSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKM 993 (1242)
Q Consensus 914 Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~ 993 (1242)
++ +++++.++++|.++++.+.+++.++.. .++.|+|+||+|++|.+++.
T Consensus 192 ~~--------------------------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~ 240 (267)
T PRK15080 192 PK--------------------------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEV 240 (267)
T ss_pred cC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHH
Confidence 42 246788999999999999999999864 57899999999999999999
Q ss_pred HHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 994 VSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 994 l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+++.|+.++....+|+.++|.|||++|
T Consensus 241 l~~~lg~~v~~~~~P~~~~a~Gaa~~~ 267 (267)
T PRK15080 241 FEKQTGLPVHKPQHPLFVTPLGIALSC 267 (267)
T ss_pred HHHHhCCCcccCCCchHHHHHHHHhhC
Confidence 999999999999999999999999875
No 84
>PRK14142 heat shock protein GrpE; Provisional
Probab=99.91 E-value=5.7e-24 Score=214.40 Aligned_cols=130 Identities=15% Similarity=0.187 Sum_probs=109.2
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHHHHHHHHHhccce
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFKLIKKFYKKFNIK 623 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 623 (1242)
++++|+|..||++|+|||++||++++++||+++|+++||||+||||||+++...+. ++++||+++|.++|+++||+
T Consensus 52 lkdk~lR~~AEfEN~RKR~erE~e~~~~~A~e~~~kdLLpVlDnLERAL~~~~~~~----~~v~~I~kqL~~iLek~GVe 127 (223)
T PRK14142 52 LTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERARKHGDLES----GPLKSVADKLDSALTGLGLV 127 (223)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHhHHHHHHhcccccc----HHHHHHHHHHHHHHHHCCCE
Confidence 35889999999999999999999999999999999999999999999998764332 46899999999999999999
Q ss_pred ecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEec
Q psy5911 624 QISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYTE 685 (1242)
Q Consensus 624 ~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~~ 685 (1242)
+|++.|++|||++||||++.+..+. ...++|+.|+|+| ...+.+ .-|+.|....
T Consensus 128 ~I~~~Ge~FDP~~HEAv~~ve~~e~--~~~~tVveV~QkG------YkL~dRVLRPA~V~Vsk 182 (223)
T PRK14142 128 AFGAEGEDFDPVLHEAVQHEGDGGQ--GSKPVIGTVMRQG------YQLGEQVLRHALVGVVD 182 (223)
T ss_pred EeCCCCCCCChhhhceeeeecCCCC--CCCCEEEEEecCC------cEeCCEeccCceEEECC
Confidence 9999999999999999997554332 2345799999999 222333 3488877753
No 85
>PRK14164 heat shock protein GrpE; Provisional
Probab=99.89 E-value=3.5e-23 Score=210.87 Aligned_cols=135 Identities=18% Similarity=0.232 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHH-HHHHHH
Q psy5911 533 LVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEI-IFLIFK 611 (1242)
Q Consensus 533 ~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g-~~~~~~ 611 (1242)
+.+++.++.+ ++++|+|..|+++|+|||++||++++++|++++|+++||||+|||+||+++.+. .+| ++||++
T Consensus 79 ~~~le~el~e-l~d~llR~~AE~eN~RkR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~-----~~g~l~~i~~ 152 (218)
T PRK14164 79 ASTVEAQLAE-RTEDLQRVTAEYANYRRRTERERQAIIETAKAGVATDLLPILDDLDLAEQHGDL-----NEGPLKAFSD 152 (218)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-----cccHHHHHHH
Confidence 3444444433 358899999999999999999999999999999999999999999999987543 245 899999
Q ss_pred HHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCc-ccceEEEEe
Q psy5911 612 LIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGR-TTPSVVGYT 684 (1242)
Q Consensus 612 ~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~-~~PS~v~~~ 684 (1242)
+|.++|+++||++|++.|++|||++||||++.+.. + .++++.|+|+| ...+.| .-|+.|.+.
T Consensus 153 ~l~~vL~k~Gve~I~~~Ge~FDP~~HEAV~~~~~~--~---~~~V~~V~qkG------Y~l~dRVLRPA~V~Va 215 (218)
T PRK14164 153 KLTNVLAGLKVEKFGEEGDAFDPEIHEAVQDLSSG--D---EKVLGTVLRKG------YRMGDRVLRTAMVIIA 215 (218)
T ss_pred HHHHHHHHCCCEEeCCCCCCCChhHhheeeeecCC--C---CCEeeEEeeCC------cEECCEeccCceEEeC
Confidence 99999999999999999999999999999976542 2 35688899999 222333 337777654
No 86
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.87 E-value=1.6e-20 Score=219.02 Aligned_cols=194 Identities=22% Similarity=0.326 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcc
Q psy5911 150 SQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG 229 (1242)
Q Consensus 150 ~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lG 229 (1242)
...+.+.+|++.||+++..++.||.|+|++|.... .....++|+|+||||+|++++.-.. +.. .....+|
T Consensus 158 ~~v~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~-~~~~~~~vvDiG~gtt~i~i~~~g~------~~~---~~~i~~G 227 (371)
T TIGR01174 158 TILRNLVKCVERCGLEVDNIVLSGLASAIAVLTED-EKELGVCLIDIGGGTTDIAVYTGGS------IRY---TKVIPIG 227 (371)
T ss_pred HHHHHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcc-hhcCCEEEEEeCCCcEEEEEEECCE------EEE---Eeeecch
Confidence 44677888999999999999999999999986433 3456789999999999999996332 211 2335689
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC------ceeeeeccccccCCCCCeeeEEEEcH
Q psy5911 230 GEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA------EQTDINLPYITADKNGPKHLNVKITR 303 (1242)
Q Consensus 230 G~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~~~~~itr 303 (1242)
|++||+.+.+.+. ....+||++|+.++.. ....+.++... .+....++|
T Consensus 228 G~~it~~i~~~l~-------------------~~~~~AE~lK~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~is~ 282 (371)
T TIGR01174 228 GNHITKDIAKALR-------------------TPLEEAERIKIKYGCASIPLEGPDENIEIPSVG------ERPPRSLSR 282 (371)
T ss_pred HHHHHHHHHHHhC-------------------CCHHHHHHHHHHeeEecccCCCCCCEEEeccCC------CCCCeEEcH
Confidence 9999998876531 1256899999999864 23445555432 234579999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCcCCcce-EEEecCccChHHHHHHHHHhccccccc------------CCCcc
Q psy5911 304 SKLESLVEDLISKSLKPCE-VALNDAKIDKSKISE-IILVGGQTRMPLVQKMVSEFFEKEVKK------------DINPD 369 (1242)
Q Consensus 304 ~~fe~l~~~~~~~i~~~i~-~~l~~~~~~~~~i~~-ViLvGG~s~ip~v~~~l~~~f~~~~~~------------~~~p~ 369 (1242)
++|++++++.++++.+.++ +.|++++.. .+++. |+|+||+|++|.+++++++.|+.++.. ..+|.
T Consensus 283 ~~l~~ii~~~~~ei~~~i~~~~L~~~~~~-~~i~~gIvLtGG~S~ipgi~~~l~~~~~~~vr~~~P~~~~~~~~~~~~p~ 361 (371)
T TIGR01174 283 KELAEIIEARAEEILEIVKQKELRKSGFK-EELNGGIVLTGGGAQLEGIVELAEKVFDNPVRIGLPQNIGGLTEDVNDPE 361 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCEEEEeChHHcccCHHHHHHHHhCCCeEEECCCccCCchhhcCCcH
Confidence 9999999999999999997 999998876 56776 999999999999999999999876432 12688
Q ss_pred hhhHhHHHHh
Q psy5911 370 EAVAVGASVQ 379 (1242)
Q Consensus 370 ~ava~GAa~~ 379 (1242)
.++|.|.++|
T Consensus 362 ~~~a~Gl~~~ 371 (371)
T TIGR01174 362 YSTAVGLLLY 371 (371)
T ss_pred HHHHHHHHhC
Confidence 8889888764
No 87
>KOG3003|consensus
Probab=99.87 E-value=1.2e-21 Score=195.44 Aligned_cols=135 Identities=19% Similarity=0.307 Sum_probs=114.9
Q ss_pred HHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCc---------chhhhHHHHHHHHH
Q psy5911 542 IILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSN---------QTKESEIIFLIFKL 612 (1242)
Q Consensus 542 ~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~---------~~~~~~g~~~~~~~ 612 (1242)
..+.++|+|..||++|.|+|+.|..++++.||+++|+++||.|.|||++|++...+. ...+.+|+.||+++
T Consensus 87 ~eLkdk~~rs~Ad~eNlr~R~~r~~edak~FaiQ~f~kdLleVaD~Le~a~~~v~ee~~~~d~~~~L~~l~eGl~mte~q 166 (236)
T KOG3003|consen 87 QELKDKYLRSLAECENLRDRTIRDVEDAKKFAIQSFCKDLLEVADNLEKATECVKEESEKEDQKKDLKDLFEGLSMTEAQ 166 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcccccchHHHHHHhHHHHHHHH
Confidence 446799999999999999999999999999999999999999999999998876542 24677999999999
Q ss_pred HHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCC-CCcccceEEEEec
Q psy5911 613 IKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSE-GGRTTPSVVGYTE 685 (1242)
Q Consensus 613 ~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~-g~~~~PS~v~~~~ 685 (1242)
|.++|.|||++..+|+|++||||.|||++|.|..+.+ .++|.-+.+.| ... |...-|+.|....
T Consensus 167 l~~vf~KhGLekldPigekFDPn~HEAvfq~p~~~k~---pgtV~~v~k~G------y~L~~R~IRPA~VgV~~ 231 (236)
T KOG3003|consen 167 LKEVFAKHGLEKLDPIGEKFDPNEHEAVFQVPDAAKE---PGTVALVTKKG------YKLNGRVIRPAMVGVVK 231 (236)
T ss_pred HHHHHHHcCceecCCCCCCCCcchhheeEeccccCCC---CCeEEEEeccC------cccCCeeechhheeeec
Confidence 9999999999999999999999999999998776655 45577777777 222 3334588877653
No 88
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.85 E-value=9.6e-20 Score=214.40 Aligned_cols=194 Identities=20% Similarity=0.237 Sum_probs=146.5
Q ss_pred HHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHH
Q psy5911 153 QATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGED 232 (1242)
Q Consensus 153 ~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~ 232 (1242)
+.+.+|++.|||++..++.||.|+|.++.... ..+..++|+|+||||||+++++- +.+. ......+||++
T Consensus 169 ~~~~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~-e~~~gv~vvDiGggtTdisv~~~------G~l~---~~~~i~~GG~~ 238 (420)
T PRK09472 169 KNIVKAVERCGLKVDQLIFAGLASSYAVLTED-ERELGVCVVDIGGGTMDIAVYTG------GALR---HTKVIPYAGNV 238 (420)
T ss_pred HHHHHHHHHcCCeEeeEEehhhHHHHHhcChh-hhhcCeEEEEeCCCceEEEEEEC------CEEE---EEeeeechHHH
Confidence 34467999999999999999999999986543 34667899999999999999963 2221 22234569999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC------ceeeeeccccccCCCCCeeeEEEEcHHHH
Q psy5911 233 FDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA------EQTDINLPYITADKNGPKHLNVKITRSKL 306 (1242)
Q Consensus 233 iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~~~~~itr~~f 306 (1242)
|++.|...+. . -...||++|+.+... ....+.++..... ....++|.+|
T Consensus 239 it~dIa~~l~--------i-----------~~~~AE~lK~~~g~~~~~~~~~~~~i~v~~~~~~------~~~~i~~~~l 293 (420)
T PRK09472 239 VTSDIAYAFG--------T-----------PPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGR------PPRSLQRQTL 293 (420)
T ss_pred HHHHHHHHhC--------c-----------CHHHHHHHHHhcceeccccCCCCceeEecCCCCC------CCeEEcHHHH
Confidence 9999876542 1 146899999775532 2334555432211 1248899999
Q ss_pred HHHHHHHHHHHHHHHHH-------HHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccccccc------------CCC
Q psy5911 307 ESLVEDLISKSLKPCEV-------ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK------------DIN 367 (1242)
Q Consensus 307 e~l~~~~~~~i~~~i~~-------~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~------------~~~ 367 (1242)
.+++.+.++++.+.+++ .+..+++....++.|+|+||+|++|.+++++++.|+.++.. ..+
T Consensus 294 ~~ii~~r~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~~~vri~~P~~~~g~~~~~~~ 373 (420)
T PRK09472 294 AEVIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQE 373 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhCCCeEEeCCcccCCChhhcCC
Confidence 99999977777766654 55677777778999999999999999999999999866543 248
Q ss_pred cchhhHhHHHHhhh
Q psy5911 368 PDEAVAVGASVQAG 381 (1242)
Q Consensus 368 p~~ava~GAa~~a~ 381 (1242)
|..++|.|.++|+.
T Consensus 374 P~~ata~Gl~~~~~ 387 (420)
T PRK09472 374 PYYSTAVGLLHYGK 387 (420)
T ss_pred cHHHHHHHHHHHhh
Confidence 99999999999975
No 89
>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.
Probab=99.83 E-value=1.1e-20 Score=184.70 Aligned_cols=117 Identities=21% Similarity=0.341 Sum_probs=106.2
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC--cchhhhHHHHHHHHHHHHHHHhcc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS--NQTKESEIIFLIFKLIKKFYKKFN 621 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~g 621 (1242)
+++.|+|..|+++|+|||++++++++++++.++++++||||+|||+||+++... +...+.+|++|++++|.++|+++|
T Consensus 4 ~~~~~~r~~ae~~N~rkr~~~e~~~~~~~~~~~~~~~ll~v~D~le~a~~~~~~~~~~~~~~~g~~~i~~~l~~~L~~~G 83 (137)
T cd00446 4 LKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKEEELKNLVEGVEMTLKQLLDVLEKHG 83 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357899999999999999999999999999999999999999999999988654 345788999999999999999999
Q ss_pred ceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 622 IKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 622 ~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
|++|++.|++|||++|||+++.+..+. ..++++.++++|
T Consensus 84 v~~i~~~g~~FDp~~Heav~~~~~~~~---~~~~I~~v~~~G 122 (137)
T cd00446 84 VEKIEPEGEPFDPNLHEAVMQVPSPDV---EPGTVVEVLQKG 122 (137)
T ss_pred CEEECCCCCCCCHHHheeeeeecCCCC---CcCEEEEEeecC
Confidence 999999999999999999997655443 467799999998
No 90
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.80 E-value=6.1e-18 Score=197.36 Aligned_cols=195 Identities=22% Similarity=0.327 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCC
Q psy5911 789 DSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFL 868 (1242)
Q Consensus 789 ~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~l 868 (1242)
....+.+.+|++.||+++..++.||.|+|++|..... .+..++|+|+||||||++++.-.. .. ......+
T Consensus 157 ~~~v~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~~-~~~~~~vvDiG~gtt~i~i~~~g~------~~---~~~~i~~ 226 (371)
T TIGR01174 157 STILRNLVKCVERCGLEVDNIVLSGLASAIAVLTEDE-KELGVCLIDIGGGTTDIAVYTGGS------IR---YTKVIPI 226 (371)
T ss_pred HHHHHHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcch-hcCCEEEEEeCCCcEEEEEEECCE------EE---EEeeecc
Confidence 3456778889999999999999999999999865433 355688999999999999996332 21 1233568
Q ss_pred CchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC------ceeeEEeccccccCCCCeeeEEEEc
Q psy5911 869 GGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA------EQTDINLPYITADKNGPKHLNVKIT 942 (1242)
Q Consensus 869 GG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~~~~~it 942 (1242)
||++||+.+.+.+. ....+||++|+.++.. ....+.++... .+....++
T Consensus 227 GG~~it~~i~~~l~-------------------~~~~~AE~lK~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~is 281 (371)
T TIGR01174 227 GGNHITKDIAKALR-------------------TPLEEAERIKIKYGCASIPLEGPDENIEIPSVG------ERPPRSLS 281 (371)
T ss_pred hHHHHHHHHHHHhC-------------------CCHHHHHHHHHHeeEecccCCCCCCEEEeccCC------CCCCeEEc
Confidence 99999998876531 1256899999999863 23445554432 23567999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHhcCCCccCcce-EEEecCcCchHHHHHHHHhhhcccccc------------cCCc
Q psy5911 943 RSKLESLVEDLISKSLKPCE-VALNDAKIDKSKISE-IILVGGQTRMPLVQKMVSEFFEKEVKK------------DINP 1008 (1242)
Q Consensus 943 r~~fe~~~~~~~~~~~~~i~-~~l~~~~~~~~~i~~-ViLvGG~s~ip~v~~~l~~~f~~~v~~------------~~~p 1008 (1242)
|++|++++++.++++.+.++ +.|++++.. .+++. |+|+||+|++|.+++++++.|+.++.. .-+|
T Consensus 282 ~~~l~~ii~~~~~ei~~~i~~~~L~~~~~~-~~i~~gIvLtGG~S~ipgi~~~l~~~~~~~vr~~~P~~~~~~~~~~~~p 360 (371)
T TIGR01174 282 RKELAEIIEARAEEILEIVKQKELRKSGFK-EELNGGIVLTGGGAQLEGIVELAEKVFDNPVRIGLPQNIGGLTEDVNDP 360 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCEEEEeChHHcccCHHHHHHHHhCCCeEEECCCccCCchhhcCCc
Confidence 99999999999999999997 999998876 56777 999999999999999999999865421 1267
Q ss_pred chhhhhhHHHh
Q psy5911 1009 DEAVAVGASVQ 1019 (1242)
Q Consensus 1009 ~~aVa~GAa~~ 1019 (1242)
..++|.|.++|
T Consensus 361 ~~~~a~Gl~~~ 371 (371)
T TIGR01174 361 EYSTAVGLLLY 371 (371)
T ss_pred HHHHHHHHHhC
Confidence 88888888764
No 91
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.75 E-value=7.2e-17 Score=190.11 Aligned_cols=194 Identities=20% Similarity=0.245 Sum_probs=145.0
Q ss_pred HHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchH
Q psy5911 793 QATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGED 872 (1242)
Q Consensus 793 ~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~ 872 (1242)
+.+.+|++.|||++..++.||.|+|.++..... .+..++|+|+||||||++++.- +.+ .......+||++
T Consensus 169 ~~~~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~e-~~~gv~vvDiGggtTdisv~~~------G~l---~~~~~i~~GG~~ 238 (420)
T PRK09472 169 KNIVKAVERCGLKVDQLIFAGLASSYAVLTEDE-RELGVCVVDIGGGTMDIAVYTG------GAL---RHTKVIPYAGNV 238 (420)
T ss_pred HHHHHHHHHcCCeEeeEEehhhHHHHHhcChhh-hhcCeEEEEeCCCceEEEEEEC------CEE---EEEeeeechHHH
Confidence 334569999999999999999999999865533 4556888899999999999973 222 122335579999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC------ceeeEEeccccccCCCCeeeEEEEcHHHH
Q psy5911 873 FDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA------EQTDINLPYITADKNGPKHLNVKITRSKL 946 (1242)
Q Consensus 873 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~~~~~itr~~f 946 (1242)
+++.|...+.- -...||++|+..... ....+.++... +. ....++|.+|
T Consensus 239 it~dIa~~l~i-------------------~~~~AE~lK~~~g~~~~~~~~~~~~i~v~~~~----~~--~~~~i~~~~l 293 (420)
T PRK09472 239 VTSDIAYAFGT-------------------PPSDAEAIKVRHGCALGSIVGKDESVEVPSVG----GR--PPRSLQRQTL 293 (420)
T ss_pred HHHHHHHHhCc-------------------CHHHHHHHHHhcceeccccCCCCceeEecCCC----CC--CCeEEcHHHH
Confidence 99998765421 146899999765432 22345554322 11 1248899999
Q ss_pred HHHHHHHHHHHHHHHH-------HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccc------------cCC
Q psy5911 947 ESLVEDLISKSLKPCE-------VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK------------DIN 1007 (1242)
Q Consensus 947 e~~~~~~~~~~~~~i~-------~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~------------~~~ 1007 (1242)
.+++.+.++++.+.++ ..+.++++....++.|+|+||+|++|.+++++++.|+.++.. ..+
T Consensus 294 ~~ii~~r~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~~~vri~~P~~~~g~~~~~~~ 373 (420)
T PRK09472 294 AEVIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQE 373 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhCCCeEEeCCcccCCChhhcCC
Confidence 9999997666666665 455677777778999999999999999999999999865432 248
Q ss_pred cchhhhhhHHHhhh
Q psy5911 1008 PDEAVAVGASVQAG 1021 (1242)
Q Consensus 1008 p~~aVa~GAa~~a~ 1021 (1242)
|..++|.|.++++.
T Consensus 374 P~~ata~Gl~~~~~ 387 (420)
T PRK09472 374 PYYSTAVGLLHYGK 387 (420)
T ss_pred cHHHHHHHHHHHhh
Confidence 99999999999975
No 92
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.74 E-value=2.2e-16 Score=179.35 Aligned_cols=325 Identities=24% Similarity=0.359 Sum_probs=214.9
Q ss_pred eEEEEEcCccceEEEEEE--CC-eEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCC
Q psy5911 4 KIIGIDLGTTNSCVAVLN--NG-KPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 80 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~--~g-~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 80 (1242)
.++|+|+||+..++.+.. ++ ...++.- -..||-= .. +|. +.--.+..+.. +..+....+..|....+
T Consensus 7 ~iv~LDIGTskV~~lVge~~~~g~i~iig~----g~~~SrG-ik-~G~-I~di~~~~~sI---~~av~~AE~mag~~i~~ 76 (418)
T COG0849 7 LIVGLDIGTSKVKALVGELRPDGRLNIIGV----GSHPSRG-IK-KGV-IVDLDAAAQSI---KKAVEAAERMAGCEIKS 76 (418)
T ss_pred eEEEEEccCcEEEEEEEEEcCCCeEEEEee----ecccCcc-cc-cce-EEcHHHHHHHH---HHHHHHHHHhcCCCcce
Confidence 699999999999988773 34 4555532 1223211 11 122 22222222211 23455555666654331
Q ss_pred hHHHHHhccCCeEEEecCCCCeEEEEcC-eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCC-H---------
Q psy5911 81 EIVQTVLKMVPYKIVAADNGDAWVEVKD-KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFN-D--------- 149 (1242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~-~--------- 149 (1242)
..+ .++-......+....+.+.+ +.++.+++- .+.+.|......+-..++-..|-.|. +
T Consensus 77 v~v-----s~sG~~i~s~~~~g~v~i~~~~eIt~~DI~-----rvl~~A~~~~~~~~~~ilh~~p~~y~vD~~~~I~dP~ 146 (418)
T COG0849 77 VIV-----SLSGNHIKSQNVNGEVSISEEKEITQEDIE-----RVLEAAKAVAIPPEREILHVIPQEYIVDGQEGIKDPL 146 (418)
T ss_pred EEE-----EeccceeEEEeeEEEEEcCCCCccCHHHHH-----HHHHHHHhhccCCCceEEEEeeeEEEECCccccCCcc
Confidence 110 11111112222233344445 666666664 44444444333333445555554443 1
Q ss_pred ------------------HHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEee
Q psy5911 150 ------------------SQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANV 211 (1242)
Q Consensus 150 ------------------~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~ 211 (1242)
.--+.+.+|.+.+|+++..++.+|.|+|.+...+ ..++..++++|+||||+|+++++-..
T Consensus 147 gm~G~rL~v~vhvit~~~~~~~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~-dEkelGv~lIDiG~GTTdIai~~~G~- 224 (418)
T COG0849 147 GMSGVRLEVEVHVITGPKNILENLEKCVERAGLKVDNIVLEPLASALAVLTE-DEKELGVALIDIGGGTTDIAIYKNGA- 224 (418)
T ss_pred ccccceEEEEEEEEEcchHHHHHHHHHHHHhCCCeeeEEEehhhhhhhccCc-ccHhcCeEEEEeCCCcEEEEEEECCE-
Confidence 1256788999999999999999999999988543 44666788889999999999997543
Q ss_pred cCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc------eeeeecc
Q psy5911 212 DGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE------QTDINLP 285 (1242)
Q Consensus 212 ~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~------~~~i~i~ 285 (1242)
+...+--.+||++++..|+.-|.-. ...||++|..+.... ...+.++
T Consensus 225 --------l~~~~~ipvgG~~vT~DIa~~l~t~-------------------~~~AE~iK~~~g~a~~~~~~~~~~i~v~ 277 (418)
T COG0849 225 --------LRYTGVIPVGGDHVTKDIAKGLKTP-------------------FEEAERIKIKYGSALISLADDEETIEVP 277 (418)
T ss_pred --------EEEEeeEeeCccHHHHHHHHHhCCC-------------------HHHHHHHHHHcCccccCcCCCcceEecc
Confidence 2222334579999999998776433 348999999886543 2335555
Q ss_pred ccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccccccc-
Q psy5911 286 YITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK- 364 (1242)
Q Consensus 286 ~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~- 364 (1242)
....+ ....+||.++.+++++.+.++..+++..|++.+....-...|+|+||++.+|.+.+..++.|+.+++.
T Consensus 278 ~vg~~------~~~~~t~~~ls~II~aR~~Ei~~lV~~~l~~~g~~~~~~~gvVlTGG~a~l~Gi~elA~~if~~~vRig 351 (418)
T COG0849 278 SVGSD------IPRQVTRSELSEIIEARVEEILELVKAELRKSGLPNHLPGGVVLTGGGAQLPGIVELAERIFGRPVRLG 351 (418)
T ss_pred cCCCc------ccchhhHHHHHHHHHhhHHHHHHHHHHHHHHcCccccCCCeEEEECchhcCccHHHHHHHhcCCceEeC
Confidence 44332 25789999999999999999999999999999998777899999999999999999999999765432
Q ss_pred -----------CCCcchhhHhHHHHhhhhh
Q psy5911 365 -----------DINPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 365 -----------~~~p~~ava~GAa~~a~~l 383 (1242)
..+|..+.|.|..++++..
T Consensus 352 ~P~~~~Gl~d~~~~p~fs~avGl~~~~~~~ 381 (418)
T COG0849 352 VPLNIVGLTDIARNPAFSTAVGLLLYGALM 381 (418)
T ss_pred CCccccCchhhccCchhhhhHHHHHHHhhc
Confidence 2368999999999988753
No 93
>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.
Probab=99.73 E-value=5.1e-18 Score=173.34 Aligned_cols=116 Identities=22% Similarity=0.367 Sum_probs=99.7
Q ss_pred HHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccC--CcchhhhHHHHHHHHHHHHHHHhccc
Q psy5911 545 EEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFD--SNQTKESEIIFLIFKLIKKFYKKFNI 622 (1242)
Q Consensus 545 ~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~g~ 622 (1242)
.+.|.+..++++|+++|+.++.+++++++.++|+++|||++|+|+||+.+.. .+...+.+|++|++++|.++|+++||
T Consensus 31 ~~~~~r~~ae~en~~~r~~~e~~~~~~~~~~~~~~~ll~v~D~l~~a~~~~~~~~~~~~~~~g~~~~~~~l~~~L~~~Gv 110 (165)
T PF01025_consen 31 KERLLRLQAEFENYRKRLEKEKEEAKKYALEKFLKDLLPVLDNLERALEAAKSNEEEESLLEGLEMILKQLEDILEKNGV 110 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC-SHHCTCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5788999999999999999999999999999999999999999999999853 45568999999999999999999999
Q ss_pred eecccCCCCCCcCccccccccccccccCCceEEEEEEEeCC
Q psy5911 623 KQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNG 663 (1242)
Q Consensus 623 ~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g 663 (1242)
++|++.|++|||++|+|+++.+..+.+ .++++.|+++|
T Consensus 111 ~~i~~~G~~FDp~~heav~~~~~~~~~---~~~I~~v~~~G 148 (165)
T PF01025_consen 111 EEIEPVGEPFDPNLHEAVETVPDPDKE---PGTIVEVVRPG 148 (165)
T ss_dssp EEE--TSSB--TTTEEEEEEECSSSS----CTBEEEECC-E
T ss_pred EecCCCCCCCCHHHheeheecCcCCCC---cCeEEEEEecC
Confidence 999999999999999999987666655 45588888887
No 94
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=99.68 E-value=1.1e-15 Score=179.24 Aligned_cols=309 Identities=17% Similarity=0.165 Sum_probs=195.4
Q ss_pred EEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC---------CcEEEcHHHHHhhhhCCCchhhhchhhhC
Q psy5911 5 IIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED---------NRIIVGLPAKRQAITNPNNTLYAIKRLIG 75 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---------~~~~vG~~A~~~~~~~~~~~~~~~k~~lg 75 (1242)
.|.||+||+++++++..++.|..+ +||+++...+ ...++|.+|...... +
T Consensus 1 ~iViD~Gs~~~r~G~a~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~~G~~a~~~~~~-------------~ 59 (371)
T cd00012 1 AVVIDNGSGTIKAGFAGEDAPRVV--------FPSCVGRPKHQSVMVGAGDKDYFVGEEALEKRGL-------------G 59 (371)
T ss_pred CEEEECCCCeEEEEeCCCCCCceE--------eeccceeecCcccccccCCCceEEchhhhhCCCC-------------c
Confidence 378999999999999876644432 3666665432 356778776542110 0
Q ss_pred CCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHH
Q psy5911 76 RKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQAT 155 (1242)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~ 155 (1242)
. .-.+| +.+..+...+....+++++...... ....-..+++++|..++..+|+.+
T Consensus 60 ~----------~~~~P--------------~~~G~i~d~~~~e~~~~~~~~~~l~-~~~~~~~vvl~~p~~~~~~~r~~~ 114 (371)
T cd00012 60 L----------ELIYP--------------IEHGIVVDWDDMEKIWDHLFFNELK-VNPEEHPVLLTEPPLNPKSNREKT 114 (371)
T ss_pred e----------EEccc--------------ccCCEEeCHHHHHHHHHHHHHHhcC-CCCCCCceEEecCCCCCHHHHHHH
Confidence 0 00111 1222334456667777777654321 122346799999999998888888
Q ss_pred HH-HHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHH
Q psy5911 156 KD-AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFD 234 (1242)
Q Consensus 156 ~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD 234 (1242)
.+ +.+..|++.+.++++|.+|+++++. .+.+|+|+|+++++++.+.-.. .+........+||.++|
T Consensus 115 ~e~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~pv~~G~-------~~~~~~~~~~~GG~~l~ 181 (371)
T cd00012 115 TEIMFETFNVPALYVAIQAVLSLYASGR------TTGLVVDSGDGVTHVVPVYDGY-------VLPHAIKRLDLAGRDLT 181 (371)
T ss_pred HHHhhccCCCCEEEEechHHHHHHhcCC------CeEEEEECCCCeeEEEEEECCE-------EchhhheeccccHHHHH
Confidence 77 5677999999999999999999864 5678999999999999885321 12222334568999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCcee---e-----eeccccccCCCCCeeeEEEEcHHHH
Q psy5911 235 MRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT---D-----INLPYITADKNGPKHLNVKITRSKL 306 (1242)
Q Consensus 235 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~---~-----i~i~~~~~~~~~~~~~~~~itr~~f 306 (1242)
+.|.+++..+.. ..+. ..-...++.+|+.+...... . ...........-+....+.++.+.|
T Consensus 182 ~~l~~~l~~~~~---~~~~-------~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~~~~er~ 251 (371)
T cd00012 182 RYLKELLRERGY---ELNS-------SDEREIVRDIKEKLCYVALDIEEEQDKSAKETSLLEKTYELPDGRTIKVGNERF 251 (371)
T ss_pred HHHHHHHHhcCC---Cccc-------hhHHHHHHHHHHhheeecCCHHHHHHhhhccCCccceeEECCCCeEEEEChHHh
Confidence 999998865431 0011 11234567777775432110 0 0000000000000123466666544
Q ss_pred H---HHHHHH-----HHHHHHHHHHHHHHcCCCc--CCcceEEEecCccChHHHHHHHHHhccc----------ccccCC
Q psy5911 307 E---SLVEDL-----ISKSLKPCEVALNDAKIDK--SKISEIILVGGQTRMPLVQKMVSEFFEK----------EVKKDI 366 (1242)
Q Consensus 307 e---~l~~~~-----~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~~----------~~~~~~ 366 (1242)
. .++.|. ...+.+.|.+++.....+. .-.+.|+|+||+|++|.+.++|.+.++. .+....
T Consensus 252 ~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~~~~~~~~ 331 (371)
T cd00012 252 RAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDLYSNIVLSGGSTLFPGFGERLQKELLKLAPPSKDTKVKVIAPP 331 (371)
T ss_pred hChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCEEEeCCccCCcCHHHHHHHHHHHhCCcccceEEEEccCC
Confidence 2 233332 2367788888888765332 2378899999999999999999888741 234567
Q ss_pred CcchhhHhHHHHhhhh
Q psy5911 367 NPDEAVAVGASVQAGV 382 (1242)
Q Consensus 367 ~p~~ava~GAa~~a~~ 382 (1242)
+|..++-.||+++|..
T Consensus 332 ~~~~~aw~G~si~as~ 347 (371)
T cd00012 332 ERKYSVWLGGSILASL 347 (371)
T ss_pred CccccEEeCchhhcCc
Confidence 8999999999999865
No 95
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=99.62 E-value=8.4e-15 Score=171.94 Aligned_cols=300 Identities=18% Similarity=0.168 Sum_probs=189.5
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC--------cEEEcHHHHHhhhhCCCchhhhchhhhC
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN--------RIIVGLPAKRQAITNPNNTLYAIKRLIG 75 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~--------~~~vG~~A~~~~~~~~~~~~~~~k~~lg 75 (1242)
..|+||+||.++.+++..+..|.++ +||+|+...++ ..++|.+|.... ...
T Consensus 2 ~~iviD~Gs~~~k~G~~~~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~G~~a~~~~----~~~--------- 60 (373)
T smart00268 2 PAIVIDNGSGTIKAGFAGEDEPQVV--------FPSIVGRPKDGKGMVGDAKDTFVGDEAQEKR----GGL--------- 60 (373)
T ss_pred CeEEEECCCCcEEEeeCCCCCCcEE--------ccceeeEecccccccCCCcceEecchhhhcC----CCc---------
Confidence 4799999999999999876666544 48888876432 246676663211 000
Q ss_pred CCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHH
Q psy5911 76 RKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQAT 155 (1242)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~ 155 (1242)
.-.+| +.+..+...+....+++++...... ....-..+++|.|...+..+|+.+
T Consensus 61 -----------~~~~P--------------~~~G~i~d~~~~e~i~~~~~~~~l~-~~~~~~~vll~~p~~~~~~~r~~~ 114 (373)
T smart00268 61 -----------ELKYP--------------IEHGIVENWDDMEKIWDYTFFNELR-VEPEEHPVLLTEPPMNPKSNREKI 114 (373)
T ss_pred -----------eecCC--------------CcCCEEeCHHHHHHHHHHHHhhhcC-CCCccCeeEEecCCCCCHHHHHHH
Confidence 00112 1233445567778888888764211 112235789999999999999999
Q ss_pred HHHH-HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHH
Q psy5911 156 KDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFD 234 (1242)
Q Consensus 156 ~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD 234 (1242)
.+.+ +..|++.+.++++|.+|+++++ ..+.+|+|+|+++++++.+.-.. .+.....-..+||.++|
T Consensus 115 ~e~lfE~~~~~~v~~~~~~~~a~~~~g------~~~~lVVDiG~~~t~v~pv~~G~-------~~~~~~~~~~~GG~~l~ 181 (373)
T smart00268 115 LEIMFETFNFPALYIAIQAVLSLYASG------RTTGLVIDSGDGVTHVVPVVDGY-------VLPHAIKRIDIAGRDLT 181 (373)
T ss_pred HHHhhccCCCCeEEEeccHHHHHHhCC------CCEEEEEecCCCcceEEEEECCE-------EchhhheeccCcHHHHH
Confidence 8876 5779999999999999999986 35678899999999999986221 12222233468999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce-------------------eeeeccccccCCCCCe
Q psy5911 235 MRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ-------------------TDINLPYITADKNGPK 295 (1242)
Q Consensus 235 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-------------------~~i~i~~~~~~~~~~~ 295 (1242)
+.|.+++...- ...+. ..-...++.+|+.+..... ....+| +
T Consensus 182 ~~l~~~l~~~~---~~~~~-------~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~lp----d----- 242 (373)
T smart00268 182 DYLKELLSERG---YQFNS-------SAEFEIVREIKEKLCYVAEDFEKEMKKARESSESSKLEKTYELP----D----- 242 (373)
T ss_pred HHHHHHHHhcC---CCCCc-------HHHHHHHHHhhhheeeecCChHHHHHHhhhcccccccceeEECC----C-----
Confidence 99998886511 00111 1123446666665432210 011111 1
Q ss_pred eeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCCcC--CcceEEEecCccChHHHHHHHHHhcc------
Q psy5911 296 HLNVKITRSKLE---SLVEDL-----ISKSLKPCEVALNDAKIDKS--KISEIILVGGQTRMPLVQKMVSEFFE------ 359 (1242)
Q Consensus 296 ~~~~~itr~~fe---~l~~~~-----~~~i~~~i~~~l~~~~~~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~------ 359 (1242)
...+.+..+.|. .++.|. ...+.+.|.+++..+..+.. -.+.|+|+||+|++|.+.++|.+.+.
T Consensus 243 g~~~~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~ 322 (373)
T smart00268 243 GNTIKVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGGSTLIPGFGERLEKELKQLAPKK 322 (373)
T ss_pred CCEEEEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCeEeecccccCcCHHHHHHHHHHHhCCCC
Confidence 112344433331 233331 23677788888876653321 25679999999999999999987772
Q ss_pred c--ccccCCCcchhhHhHHHHhhhh
Q psy5911 360 K--EVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 360 ~--~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
. .+....++..++=.||+++|..
T Consensus 323 ~~v~v~~~~~~~~~~W~G~silas~ 347 (373)
T smart00268 323 LKVKVIAPPERKYSVWLGGSILASL 347 (373)
T ss_pred ceeEEecCCCCccceEeCcccccCc
Confidence 1 2334556677888888888754
No 96
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=99.57 E-value=3.3e-15 Score=144.63 Aligned_cols=196 Identities=26% Similarity=0.389 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCC
Q psy5911 119 EILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGG 198 (1242)
Q Consensus 119 ~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~Gg 198 (1242)
.+.+++++.+++.+|..++++.=++|..-.....+...+..+.||++++..++||||||.-.+++.. .|+|+||
T Consensus 76 eiVrrlkd~lEk~lGi~~tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~dg------~VVDiGG 149 (277)
T COG4820 76 EIVRRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLDDG------GVVDIGG 149 (277)
T ss_pred HHHHHHHHHHHHhhCeEeeeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccCCC------cEEEeCC
Confidence 4678899999999999999999999999877777778888899999999999999999977766444 5779999
Q ss_pred cceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc
Q psy5911 199 GTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE 278 (1242)
Q Consensus 199 gT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~ 278 (1242)
||+-+|+++-.+ |..+ .|..-||.++...|+-+ ++++ .++||..|+.-...
T Consensus 150 GTTGIsi~kkGk--------Viy~-ADEpTGGtHmtLvlAG~--------ygi~-----------~EeAE~~Kr~~k~~- 200 (277)
T COG4820 150 GTTGISIVKKGK--------VIYS-ADEPTGGTHMTLVLAGN--------YGIS-----------LEEAEQYKRGHKKG- 200 (277)
T ss_pred CcceeEEEEcCc--------EEEe-ccCCCCceeEEEEEecc--------cCcC-----------HhHHHHhhhccccc-
Confidence 999999997554 3333 34556887776554432 3333 45777777643111
Q ss_pred eeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc
Q psy5911 279 QTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF 358 (1242)
Q Consensus 279 ~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f 358 (1242)
+|.-..+.|+++++.+.+.+.++..+ +..+.|+||+|.-|.+.+.+++.|
T Consensus 201 -------------------------~Eif~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~l 250 (277)
T COG4820 201 -------------------------EEIFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQL 250 (277)
T ss_pred -------------------------hhcccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHHh
Confidence 11112468999999999999998765 667999999999999999999999
Q ss_pred ccccccCCCcchhhHhHHHHh
Q psy5911 359 EKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 359 ~~~~~~~~~p~~ava~GAa~~ 379 (1242)
+.++..+..|....-+|-|.-
T Consensus 251 ~l~v~~P~~p~y~TPLgIA~s 271 (277)
T COG4820 251 ALQVHLPQHPLYMTPLGIASS 271 (277)
T ss_pred ccccccCCCcceechhhhhhc
Confidence 999999988888777776654
No 97
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.56 E-value=5.1e-13 Score=152.10 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=160.6
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEE
Q psy5911 779 AVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFE 858 (1242)
Q Consensus 779 ~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~ 858 (1242)
.++|+|..+ -+.+.+|.+.+|+++..++.+|.|+|.+...+.. ++-.++++|+||||||++++.-..
T Consensus 158 hvit~~~~~----~~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~dE-kelGv~lIDiG~GTTdIai~~~G~-------- 224 (418)
T COG0849 158 HVITGPKNI----LENLEKCVERAGLKVDNIVLEPLASALAVLTEDE-KELGVALIDIGGGTTDIAIYKNGA-------- 224 (418)
T ss_pred EEEEcchHH----HHHHHHHHHHhCCCeeeEEEehhhhhhhccCccc-HhcCeEEEEeCCCcEEEEEEECCE--------
Confidence 355666544 4678899999999999999999999998876554 444566679999999999998544
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCc------eeeEEeccccccCC
Q psy5911 859 VLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE------QTDINLPYITADKN 932 (1242)
Q Consensus 859 v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~------~~~i~i~~~~~~~~ 932 (1242)
+.+.+...+||++++..|..-|.-. ...||+.|....... ...+.++....+
T Consensus 225 -l~~~~~ipvgG~~vT~DIa~~l~t~-------------------~~~AE~iK~~~g~a~~~~~~~~~~i~v~~vg~~-- 282 (418)
T COG0849 225 -LRYTGVIPVGGDHVTKDIAKGLKTP-------------------FEEAERIKIKYGSALISLADDEETIEVPSVGSD-- 282 (418)
T ss_pred -EEEEeeEeeCccHHHHHHHHHhCCC-------------------HHHHHHHHHHcCccccCcCCCcceEecccCCCc--
Confidence 2333445679999999998766433 347888988876442 223455443322
Q ss_pred CCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccc--------
Q psy5911 933 GPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK-------- 1004 (1242)
Q Consensus 933 ~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~-------- 1004 (1242)
....+||.++.+++++-+.+++.+++..|++.+....-...|+|+||++.+|.+.+..++.|+.++..
T Consensus 283 ----~~~~~t~~~ls~II~aR~~Ei~~lV~~~l~~~g~~~~~~~gvVlTGG~a~l~Gi~elA~~if~~~vRig~P~~~~G 358 (418)
T COG0849 283 ----IPRQVTRSELSEIIEARVEEILELVKAELRKSGLPNHLPGGVVLTGGGAQLPGIVELAERIFGRPVRLGVPLNIVG 358 (418)
T ss_pred ----ccchhhHHHHHHHHHhhHHHHHHHHHHHHHHcCccccCCCeEEEECchhcCccHHHHHHHhcCCceEeCCCccccC
Confidence 25689999999999999999999999999999998666889999999999999999999999755321
Q ss_pred ----cCCcchhhhhhHHHhhhhh
Q psy5911 1005 ----DINPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 1005 ----~~~p~~aVa~GAa~~a~~l 1023 (1242)
..+|..+.|.|..++++..
T Consensus 359 l~d~~~~p~fs~avGl~~~~~~~ 381 (418)
T COG0849 359 LTDIARNPAFSTAVGLLLYGALM 381 (418)
T ss_pred chhhccCchhhhhHHHHHHHhhc
Confidence 2358889999999888754
No 98
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=99.52 E-value=3.3e-13 Score=158.18 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHH-HHHHcCCceeeeechhHHHHHHccCCCCCCCcEEE
Q psy5911 754 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD-AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIV 832 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vl 832 (1242)
-+....+++++...... ....-..+++++|..++..+|+.+.+ +.+..|++.+.++++|.+|+++++. .+-+
T Consensus 74 ~~~~e~~~~~~~~~~l~-~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~l 146 (371)
T cd00012 74 WDDMEKIWDHLFFNELK-VNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASGR------TTGL 146 (371)
T ss_pred HHHHHHHHHHHHHHhcC-CCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcCC------CeEE
Confidence 34556677766654221 12224579999999999888888877 5677999999999999999999875 4678
Q ss_pred EEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhh
Q psy5911 833 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKI 912 (1242)
Q Consensus 833 V~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 912 (1242)
|+|+|+++++++.+.-. ..+........+||.++|+.|.+++..+... .+. ..-...++..|+
T Consensus 147 VVDiG~~~t~i~pv~~G-------~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~---~~~-------~~~~~~~~~iKe 209 (371)
T cd00012 147 VVDSGDGVTHVVPVYDG-------YVLPHAIKRLDLAGRDLTRYLKELLRERGYE---LNS-------SDEREIVRDIKE 209 (371)
T ss_pred EEECCCCeeEEEEEECC-------EEchhhheeccccHHHHHHHHHHHHHhcCCC---ccc-------hhHHHHHHHHHH
Confidence 88999999999988632 2222233445689999999999998664320 011 111334566666
Q ss_pred hccCCcee---e-----EEeccccccCCCCeeeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHhcCCCc--cC
Q psy5911 913 ELSNAEQT---D-----INLPYITADKNGPKHLNVKITRSKLE---SLVEDL-----ISKSLKPCEVALNDAKIDK--SK 974 (1242)
Q Consensus 913 ~Ls~~~~~---~-----i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~~--~~ 974 (1242)
.+..-... . ...........-+....+.++.+.|. .++.|. ...+.+.|.+++.....+. .-
T Consensus 210 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~~~~er~~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l 289 (371)
T cd00012 210 KLCYVALDIEEEQDKSAKETSLLEKTYELPDGRTIKVGNERFRAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDL 289 (371)
T ss_pred hheeecCCHHHHHHhhhccCCccceeEECCCCeEEEEChHHhhChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHH
Confidence 64321100 0 00000000000011234666655442 233332 2367788888888765332 23
Q ss_pred cceEEEecCcCchHHHHHHHHhhhcc----------cccccCCcchhhhhhHHHhhhh
Q psy5911 975 ISEIILVGGQTRMPLVQKMVSEFFEK----------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 975 i~~ViLvGG~s~ip~v~~~l~~~f~~----------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
.+.|+|+||+|++|.+.++|.+.++. .+....+|..++-.||+++|..
T Consensus 290 ~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~~~~~~~~~~~~~aw~G~si~as~ 347 (371)
T cd00012 290 YSNIVLSGGSTLFPGFGERLQKELLKLAPPSKDTKVKVIAPPERKYSVWLGGSILASL 347 (371)
T ss_pred HhCEEEeCCccCCcCHHHHHHHHHHHhCCcccceEEEEccCCCccccEEeCchhhcCc
Confidence 78899999999999999999988752 2345678899999999999865
No 99
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=99.45 E-value=1.6e-12 Score=152.61 Aligned_cols=299 Identities=17% Similarity=0.165 Sum_probs=183.4
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCC--------cEEEcHHHHHHhhhCCcchhhHHHHhcCC
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN--------RIIVGLPAKRQAITNPNNTLYAIKRLIGR 716 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~--------~~~~G~~A~~~~~~~p~~~~~~~krllg~ 716 (1242)
.+.+|.|+.++.+.+.....|.+ .+||+|+...++ ..++|.+|.... ...
T Consensus 3 ~iviD~Gs~~~k~G~~~~~~P~~--------~~ps~v~~~~~~~~~~~~~~~~~~G~~a~~~~----~~~---------- 60 (373)
T smart00268 3 AIVIDNGSGTIKAGFAGEDEPQV--------VFPSIVGRPKDGKGMVGDAKDTFVGDEAQEKR----GGL---------- 60 (373)
T ss_pred eEEEECCCCcEEEeeCCCCCCcE--------EccceeeEecccccccCCCcceEecchhhhcC----CCc----------
Confidence 46789999998888765443433 358888876432 245676663211 000
Q ss_pred CCCChhHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHH
Q psy5911 717 KYTDEIVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATK 796 (1242)
Q Consensus 717 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~ 796 (1242)
.-.+|+ .+..+.--+....+++++...... ....-..+++|.|...+..+|+.+.
T Consensus 61 ----------~~~~P~--------------~~G~i~d~~~~e~i~~~~~~~~l~-~~~~~~~vll~~p~~~~~~~r~~~~ 115 (373)
T smart00268 61 ----------ELKYPI--------------EHGIVENWDDMEKIWDYTFFNELR-VEPEEHPVLLTEPPMNPKSNREKIL 115 (373)
T ss_pred ----------eecCCC--------------cCCEEeCHHHHHHHHHHHHhhhcC-CCCccCeeEEecCCCCCHHHHHHHH
Confidence 011221 112233456667777777664211 1112356899999999999999998
Q ss_pred HHH-HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHH
Q psy5911 797 DAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDM 875 (1242)
Q Consensus 797 ~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~ 875 (1242)
+.+ +..|++.+.++++|.+|+++++ ..+.+|+|+|+++++++.+.-. ..+........+||.++|+
T Consensus 116 e~lfE~~~~~~v~~~~~~~~a~~~~g------~~~~lVVDiG~~~t~v~pv~~G-------~~~~~~~~~~~~GG~~l~~ 182 (373)
T smart00268 116 EIMFETFNFPALYIAIQAVLSLYASG------RTTGLVIDSGDGVTHVVPVVDG-------YVLPHAIKRIDIAGRDLTD 182 (373)
T ss_pred HHhhccCCCCeEEEeccHHHHHHhCC------CCEEEEEecCCCcceEEEEECC-------EEchhhheeccCcHHHHHH
Confidence 876 6779999999999999999987 3457888999999999998622 2222223335689999999
Q ss_pred HHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCc-------------------eeeEEeccccccCCCCee
Q psy5911 876 RIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE-------------------QTDINLPYITADKNGPKH 936 (1242)
Q Consensus 876 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-------------------~~~i~i~~~~~~~~~~~~ 936 (1242)
.|.+++...-. .+ +. ..-...++.+|+.+..-. ...+.+| ++
T Consensus 183 ~l~~~l~~~~~-~~--~~-------~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~lp------dg--- 243 (373)
T smart00268 183 YLKELLSERGY-QF--NS-------SAEFEIVREIKEKLCYVAEDFEKEMKKARESSESSKLEKTYELP------DG--- 243 (373)
T ss_pred HHHHHHHhcCC-CC--Cc-------HHHHHHHHHhhhheeeecCChHHHHHHhhhcccccccceeEECC------CC---
Confidence 99998866210 00 00 011234555555542210 0011111 11
Q ss_pred eEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHhcCCCcc--CcceEEEecCcCchHHHHHHHHhhhc-------
Q psy5911 937 LNVKITRSKLE---SLVEDL-----ISKSLKPCEVALNDAKIDKS--KISEIILVGGQTRMPLVQKMVSEFFE------- 999 (1242)
Q Consensus 937 ~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~------- 999 (1242)
..+.+..+.|. .++.|. ...+.+.|.+++..+..+.. -.+.|+|+||+|++|.+.++|.+.+.
T Consensus 244 ~~~~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~~ 323 (373)
T smart00268 244 NTIKVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGGSTLIPGFGERLEKELKQLAPKKL 323 (373)
T ss_pred CEEEEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCeEeecccccCcCHHHHHHHHHHHhCCCCc
Confidence 12344433331 223331 23677788888877653321 15779999999999999999987772
Q ss_pred -ccccccCCcchhhhhhHHHhhhh
Q psy5911 1000 -KEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 1000 -~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
..+....++..++=.||+++|..
T Consensus 324 ~v~v~~~~~~~~~~W~G~silas~ 347 (373)
T smart00268 324 KVKVIAPPERKYSVWLGGSILASL 347 (373)
T ss_pred eeEEecCCCCccceEeCcccccCc
Confidence 12344556777888898888754
No 100
>PTZ00280 Actin-related protein 3; Provisional
Probab=99.45 E-value=6e-12 Score=148.94 Aligned_cols=292 Identities=16% Similarity=0.126 Sum_probs=177.5
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC------------cEEEcHHHHHhhhhCCCchhhhch
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN------------RIIVGLPAKRQAITNPNNTLYAIK 71 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~------------~~~vG~~A~~~~~~~~~~~~~~~k 71 (1242)
..|.||+||.++++++..+..|.++ +||+|+...+. ..++|++|....
T Consensus 5 ~~iViD~GS~~~k~G~ag~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~~~vG~ea~~~~------------ 64 (414)
T PTZ00280 5 PVVVIDNGTGYTKMGYAGNTEPTYI--------IPTLIADNSKQSRRRSKKGFEDLDFYIGDEALAAS------------ 64 (414)
T ss_pred CeEEEECCCCceEeeeCCCCCCCEE--------ecceeEEeccccccccccccccCCEEEcchhhhCc------------
Confidence 4799999999999999876666543 47777664321 233444433210
Q ss_pred hhhCCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHH
Q psy5911 72 RLIGRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQ 151 (1242)
Q Consensus 72 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~q 151 (1242)
..+ .+...+....+...+....+++++...... ....-..+++|.|..++..+
T Consensus 65 ------------------~~~--------~l~~Pi~~G~I~dwd~~e~l~~~~~~~~L~-~~p~~~~vllte~~~~~~~~ 117 (414)
T PTZ00280 65 ------------------KSY--------TLTYPMKHGIVEDWDLMEKFWEQCIFKYLR-CEPEEHYFILTEPPMNPPEN 117 (414)
T ss_pred ------------------CCc--------EEecCccCCEeCCHHHHHHHHHHHHHHhhc-cCCCCCceEEeeCCCCcHHH
Confidence 000 111222334455667777788876543211 12223468999999999999
Q ss_pred HHHHHHHH-HHcCCCeeeeechHHHHHHHhccCCCC----CCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCC
Q psy5911 152 RQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKP----DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDT 226 (1242)
Q Consensus 152 r~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~----~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~ 226 (1242)
|+.+.+.+ +..+++-+.+..+|.+|++++...... ...+-||+|+|.|+++++.+.-+. . +.....-.
T Consensus 118 Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g~~tglVVDiG~~~T~i~PV~~G~------~-l~~~~~~~ 190 (414)
T PTZ00280 118 REYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGGTLTGTVIDSGDGVTHVIPVVDGY------V-IGSSIKHI 190 (414)
T ss_pred HHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCCceeEEEEECCCCceEEEEEECCE------E-cccceEEe
Confidence 99987765 555999999999999999987432221 233558889999999998875221 1 11111224
Q ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce-------------eeeeccccccCCCC
Q psy5911 227 FLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ-------------TDINLPYITADKNG 293 (1242)
Q Consensus 227 ~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-------------~~i~i~~~~~~~~~ 293 (1242)
.+||.++++.|.++|..+. ..+... .....++.+|+.++.... ......+...+..+
T Consensus 191 ~~GG~~lt~~L~~lL~~~~-----~~~~~~-----~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~ 260 (414)
T PTZ00280 191 PLAGRDITNFIQQMLRERG-----EPIPAE-----DILLLAQRIKEKYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVT 260 (414)
T ss_pred cCcHHHHHHHHHHHHHHcC-----CCCCcH-----HHHHHHHHHHHhcCcccCcHHHHHHHhhcCcccccceEECCCCCC
Confidence 6799999999999886431 112111 112356677776643211 00000011111111
Q ss_pred CeeeEEEEcHHHHHH---HHHHHH------HHHHHHHHHHHHHcCCCc--CCcceEEEecCccChHHHHHHHHHhcc
Q psy5911 294 PKHLNVKITRSKLES---LVEDLI------SKSLKPCEVALNDAKIDK--SKISEIILVGGQTRMPLVQKMVSEFFE 359 (1242)
Q Consensus 294 ~~~~~~~itr~~fe~---l~~~~~------~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~ 359 (1242)
+....+.|..+.|.. ++.|-+ ..+.++|.+.+..+..+. .-.+.|+|+||+|.+|.+.++|++.+.
T Consensus 261 g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~~~d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El~ 337 (414)
T PTZ00280 261 KKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCPIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDVR 337 (414)
T ss_pred CCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCcccCcCHHHHHHHHHH
Confidence 233467788777753 444532 145677777877665432 226779999999999999999988774
No 101
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=99.41 E-value=2.9e-11 Score=138.23 Aligned_cols=209 Identities=17% Similarity=0.243 Sum_probs=138.1
Q ss_pred CCCcE--EEEecCCCCHHHH-HHHHHHHHHc------------CCCeeeeechHHHHHHHhccCCC-------CCCcEEE
Q psy5911 135 KIEKA--VITVPAYFNDSQR-QATKDAGKIA------------GLEVLRIINEPTAAALAYGLDKK-------PDDRIIV 192 (1242)
Q Consensus 135 ~~~~~--vitVPa~f~~~qr-~~~~~Aa~~A------------Gl~~~~li~Ep~AAal~y~~~~~-------~~~~~vl 192 (1242)
.+..+ +...|..+-..++ +.+++..... -+..+.+++||.+|.+.+..+.. .....++
T Consensus 109 ~~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~il 188 (344)
T PRK13917 109 EVVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVVADKAFEEGKVS 188 (344)
T ss_pred CcceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcccchhcccCcEE
Confidence 34444 4599998854443 6666654321 12446789999999887765422 2345689
Q ss_pred EEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhH
Q psy5911 193 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKI 272 (1242)
Q Consensus 193 V~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 272 (1242)
|+|+|+||+|++++.- +.+ +...++....|..++.+.+.+++..+. .+..+ +.. .++++
T Consensus 189 vIDIG~~TtD~~v~~~------~~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~---~~~~~--~~~-------~ie~~-- 247 (344)
T PRK13917 189 VIDFGSGTTDLDTIQN------LKR-VEEESFVIPKGTIDVYKRIASHISKKE---EGASI--TPY-------MLEKG-- 247 (344)
T ss_pred EEEcCCCcEEEEEEeC------cEE-cccccccccchHHHHHHHHHHHHHhhC---CCCCC--CHH-------HHHHH--
Confidence 9999999999999862 222 223344456799999999988885432 12222 111 12222
Q ss_pred HhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHH
Q psy5911 273 ELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQK 352 (1242)
Q Consensus 273 ~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~ 352 (1242)
|... .+.+. +... +.+ ++++.++++++++++.+.+...+.+ ..+++.|+|+||++++ +++
T Consensus 248 -l~~g---~i~~~-------~~~~--id~-~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~ 307 (344)
T PRK13917 248 -LEYG---ACKLN-------QKTV--IDF-KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFD 307 (344)
T ss_pred -HHcC---cEEeC-------CCce--Eeh-HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHH
Confidence 2111 11110 0011 222 4667788999999998888888753 3478999999999987 889
Q ss_pred HHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 353 MVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 353 ~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.|++.|+. +....||..|.|+|...+|..+.+
T Consensus 308 ~lk~~f~~-~~~~~~p~~ANa~G~~~~g~~~~~ 339 (344)
T PRK13917 308 SLSHWYSD-VEKADESQFANVRGYYKYGELLKN 339 (344)
T ss_pred HHHHHcCC-eEEcCChHHHHHHHHHHHHHHHhc
Confidence 99999975 467789999999999999876654
No 102
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=99.39 E-value=7.6e-12 Score=148.36 Aligned_cols=311 Identities=21% Similarity=0.252 Sum_probs=185.7
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC----cEEEcHHHHHhhhhCCCchhhhchhhhCCCC
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN----RIIVGLPAKRQAITNPNNTLYAIKRLIGRKY 78 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~----~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~ 78 (1242)
..+|-||+|+.++++++..+..|..+ +||+++...+. ...+|..+... .+. .
T Consensus 4 ~~~vViD~Gs~~~k~G~age~~P~~v--------~ps~~~~~~~~~~~~~~~~g~~~~~~---~~~---~---------- 59 (393)
T PF00022_consen 4 NKPVVIDNGSSTIKAGFAGEDLPRVV--------IPSVVGRPRDKNSSNDYYVGDEALSP---RSN---L---------- 59 (393)
T ss_dssp SSEEEEEECSSEEEEEETTSSS-SEE--------EESEEEEESSSSSSSSCEETHHHHHT---GTG---E----------
T ss_pred CCEEEEECCCceEEEEECCCCCCCCc--------CCCccccccccccceeEEeecccccc---hhh---e----------
Confidence 35789999999999999766655533 48888765443 35677663321 000 0
Q ss_pred CChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHH
Q psy5911 79 TDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA 158 (1242)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~A 158 (1242)
.....+.+..+...+....+++++.... -.....-..++++.|..++..+|+.+.+.
T Consensus 60 ----------------------~~~~p~~~g~i~~~~~~e~i~~~~~~~~-l~~~~~~~~vll~~~~~~~~~~r~~l~e~ 116 (393)
T PF00022_consen 60 ----------------------ELRSPIENGVIVDWDALEEIWDYIFSNL-LKVDPSDHPVLLTEPPFNPRSQREKLAEI 116 (393)
T ss_dssp ----------------------EEEESEETTEESSHHHHHHHHHHHHHTT-T-SSGGGSEEEEEESTT--HHHHHHHHHH
T ss_pred ----------------------eeeeeccccccccccccccccccccccc-cccccccceeeeeccccCCchhhhhhhhh
Confidence 0011122334445666677777776643 11223345799999999999999987765
Q ss_pred -HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHH
Q psy5911 159 -GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 237 (1242)
Q Consensus 159 -a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l 237 (1242)
.+..|++.+.++++|.+|+++++.. +-||+|+|.+.+.++-+.- + +.+........+||.++++.|
T Consensus 117 lfE~~~~~~v~~~~~~~~a~~~~g~~------tglVVD~G~~~t~v~pV~d------G-~~~~~~~~~~~~GG~~lt~~l 183 (393)
T PF00022_consen 117 LFEKFGVPSVYFIPSPLLALYASGRT------TGLVVDIGYSSTSVVPVVD------G-YVLPHSIKRSPIGGDDLTEYL 183 (393)
T ss_dssp HHHTS--SEEEEEEHHHHHHHHTTBS------SEEEEEESSS-EEEEEEET------T-EE-GGGBEEES-SHHHHHHHH
T ss_pred hhcccccceeeeeecccccccccccc------cccccccceeeeeeeeeee------c-cccccccccccccHHHHHHHH
Confidence 4577999999999999999999764 3488899999999987741 1 111112223467999999999
Q ss_pred HHHHHHH-HHHhcCCCCC------CCHHHHHHHHHHHHHHhHHhcCC---------------ceeeeeccccccCCCCCe
Q psy5911 238 INHLIYE-FKIENGVDLS------GDSLAMQRLKEAAEKAKIELSNA---------------EQTDINLPYITADKNGPK 295 (1242)
Q Consensus 238 ~~~l~~~-~~~~~~~~~~------~~~~~~~~L~~~~e~~K~~Ls~~---------------~~~~i~i~~~~~~~~~~~ 295 (1242)
.++|..+ +......... ........-...++.+|+.+... ....+.+| + +
T Consensus 184 ~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~lP----d--g-- 255 (393)
T PF00022_consen 184 KELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVEEIKEECCYVSEDPDEEQEEQASENPEKSYELP----D--G-- 255 (393)
T ss_dssp HHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHHHHHHHHHSGGSSHHHHHHHHHCSTTTEEEE-T----T--S--
T ss_pred HHHHHhhccccccccccccccccccccccchhhhccchhccchhhhcccccccccccccccccceecccc----c--c--
Confidence 9988874 1110000000 01111111233344555443211 11122222 1 1
Q ss_pred eeEEEEcHHHHHHHHHHHHH----------------HHHHHHHHHHHHcCCCcCC--cceEEEecCccChHHHHHHHHHh
Q psy5911 296 HLNVKITRSKLESLVEDLIS----------------KSLKPCEVALNDAKIDKSK--ISEIILVGGQTRMPLVQKMVSEF 357 (1242)
Q Consensus 296 ~~~~~itr~~fe~l~~~~~~----------------~i~~~i~~~l~~~~~~~~~--i~~ViLvGG~s~ip~v~~~l~~~ 357 (1242)
..+.+..+.|. +.+.+++ .+.++|.+++.....+... .+.|+|+||+|++|.+.++|...
T Consensus 256 -~~i~~~~er~~-~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~~si~~~~~d~r~~l~~nIvl~GG~S~i~G~~eRL~~e 333 (393)
T PF00022_consen 256 -QTIILGKERFR-IPEILFNPSLIGIDSASEPSEFMGLPELILDSISKCPIDLRKELLSNIVLTGGSSLIPGFKERLQQE 333 (393)
T ss_dssp -SEEEESTHHHH-HHHTTTSGGGGTSSSTS---SSSCHHHHHHHHHHTSTTTTHHHHHTTEEEESGGGGSTTHHHHHHHH
T ss_pred -ccccccccccc-ccccccccccccccccccccccchhhhhhhhhhhccccccccccccceEEecccccccchHHHHHHH
Confidence 25666666653 3343332 4778888888876543322 57899999999999999999877
Q ss_pred ccc--------ccccCC-CcchhhHhHHHHhhhhh
Q psy5911 358 FEK--------EVKKDI-NPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 358 f~~--------~~~~~~-~p~~ava~GAa~~a~~l 383 (1242)
+.. ++.... +|..++=.||+++|..-
T Consensus 334 L~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl~ 368 (393)
T PF00022_consen 334 LRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASLS 368 (393)
T ss_dssp HHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTSG
T ss_pred hhhhhhccccceeccCchhhhhcccccceeeeccc
Confidence 622 234445 89999999999998753
No 103
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=99.38 E-value=2.5e-13 Score=131.79 Aligned_cols=197 Identities=26% Similarity=0.387 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeC
Q psy5911 758 AEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLG 837 (1242)
Q Consensus 758 a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~G 837 (1242)
-.+.+++++.+++.+|..++++.-++|..-.....+...+..+.||++++..++||+|||.-.+++.. .|+|+|
T Consensus 75 veiVrrlkd~lEk~lGi~~tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~dg------~VVDiG 148 (277)
T COG4820 75 VEIVRRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLDDG------GVVDIG 148 (277)
T ss_pred HHHHHHHHHHHHHhhCeEeeeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccCCC------cEEEeC
Confidence 34778999999999999999999999999877777788888999999999999999999977766543 677999
Q ss_pred CCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC
Q psy5911 838 GGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA 917 (1242)
Q Consensus 838 ggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~ 917 (1242)
|||+-+|+++-.+ +..+ .|..-||.++.-.|+-+ ++++ ++++|+.|..-...
T Consensus 149 GGTTGIsi~kkGk--------Viy~-ADEpTGGtHmtLvlAG~--------ygi~-----------~EeAE~~Kr~~k~~ 200 (277)
T COG4820 149 GGTTGISIVKKGK--------VIYS-ADEPTGGTHMTLVLAGN--------YGIS-----------LEEAEQYKRGHKKG 200 (277)
T ss_pred CCcceeEEEEcCc--------EEEe-ccCCCCceeEEEEEecc--------cCcC-----------HhHHHHhhhccccc
Confidence 9999999997544 2222 34445887665444322 3333 45677776642111
Q ss_pred ceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhh
Q psy5911 918 EQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEF 997 (1242)
Q Consensus 918 ~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~ 997 (1242)
+|.-..+.|+++++.+.+.+-++..+ +..+.|+||+|.-|.+.+.+++.
T Consensus 201 --------------------------~Eif~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~ 249 (277)
T COG4820 201 --------------------------EEIFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQ 249 (277)
T ss_pred --------------------------hhcccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHH
Confidence 11122468999999999999988765 66799999999999999999999
Q ss_pred hcccccccCCcchhhhhhHHHh
Q psy5911 998 FEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 998 f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
|+.++..+..|....-.|-|+-
T Consensus 250 l~l~v~~P~~p~y~TPLgIA~s 271 (277)
T COG4820 250 LALQVHLPQHPLYMTPLGIASS 271 (277)
T ss_pred hccccccCCCcceechhhhhhc
Confidence 9999998888888777776654
No 104
>PTZ00452 actin; Provisional
Probab=99.37 E-value=2e-11 Score=141.66 Aligned_cols=306 Identities=16% Similarity=0.157 Sum_probs=185.9
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC---------cEEEcHHHHHhhhhCCCchhhhchh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN---------RIIVGLPAKRQAITNPNNTLYAIKR 72 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~---------~~~vG~~A~~~~~~~~~~~~~~~k~ 72 (1242)
|...|-||+|+.++++++..+..|.++ +||+|....+. ..++|.+|.... ..
T Consensus 4 ~~~~vViD~Gs~~~k~G~age~~P~~i--------~ps~vg~~~~~~~~~~~~~~~~~iG~~~~~~~------~~----- 64 (375)
T PTZ00452 4 QYPAVVIDNGSGYCKIGIAGDDAPTSC--------FPAIVGRSKQNDGIFSTFNKEYYVGEEAQAKR------GV----- 64 (375)
T ss_pred CCCEEEEECCCCeEEEeeCCCCCcCEE--------ecceeEEECCccccccccccceEEChhhhccc------cC-----
Confidence 345789999999999999977777644 47776654321 233444432100 00
Q ss_pred hhCCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHH
Q psy5911 73 LIGRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQR 152 (1242)
Q Consensus 73 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr 152 (1242)
+ .+...+++..+...+....+++|+...... ....-..+++|-|...+..+|
T Consensus 65 -------------------~--------~l~~Pi~~G~I~dwd~~e~iw~~~f~~~l~-v~p~~~pvlitE~~~~~~~~R 116 (375)
T PTZ00452 65 -------------------L--------AIKEPIQNGIINSWDDIEIIWHHAFYNELC-MSPEDQPVFMTDAPMNSKFNR 116 (375)
T ss_pred -------------------c--------EEcccCcCCEEcCHHHHHHHHHHHHHhhcC-CCcccCceeeecCCCCCHHHH
Confidence 0 111123344455566777777776543211 222345789999999999999
Q ss_pred HHHHHHH-HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchH
Q psy5911 153 QATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGE 231 (1242)
Q Consensus 153 ~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 231 (1242)
+.|.+.+ +..+++.+.+.+.|.+++++++. .+-||+|+|.|.+.++-+.-+ +.+.....-..+||.
T Consensus 117 e~l~eilFE~~~vp~~~~~~~~~lslya~g~------~tglVVDiG~~~t~v~PV~dG-------~~l~~~~~r~~~gG~ 183 (375)
T PTZ00452 117 ERMTQIMFETFNTPCLYISNEAVLSLYTSGK------TIGLVVDSGEGVTHCVPVFEG-------HQIPQAITKINLAGR 183 (375)
T ss_pred HHHHHHHhhccCCceEEEechHHHHHHHCCC------ceeeeecCCCCcceEEEEECC-------EEeccceEEeeccch
Confidence 9987754 56788999999999999998764 345888999999999877522 122222223457999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce------------eeeeccccccCCCCCeeeEE
Q psy5911 232 DFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ------------TDINLPYITADKNGPKHLNV 299 (1242)
Q Consensus 232 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------------~~i~i~~~~~~~~~~~~~~~ 299 (1242)
++++.|.+.|..+ +..+.... . ...++.+|+.++.... .....++...| .-.+
T Consensus 184 ~lt~~L~~lL~~~-----~~~~~~~~-~----~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~y~LPD-----g~~i 248 (375)
T PTZ00452 184 LCTDYLTQILQEL-----GYSLTEPH-Q----RIIVKNIKERLCYTALDPQDEKRIYKESNSQDSPYKLPD-----GNIL 248 (375)
T ss_pred HHHHHHHHHHHhc-----CCCCCCHH-H----HHHHHHHHHHhccccCcHHHHHHHhhccCCcCceEECCC-----CCEE
Confidence 9999998877532 21221111 0 2235556666542210 00000111111 1246
Q ss_pred EEcHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCc--CCcceEEEecCccChHHHHHHHHHhccc--------c
Q psy5911 300 KITRSKLE---SLVEDLI-----SKSLKPCEVALNDAKIDK--SKISEIILVGGQTRMPLVQKMVSEFFEK--------E 361 (1242)
Q Consensus 300 ~itr~~fe---~l~~~~~-----~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~ 361 (1242)
.+..+.|. -+++|.+ ..+.+++.+.+..+..+. .-.+.|+|+||+|.+|.+.++|.+.+.. +
T Consensus 249 ~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v~ 328 (375)
T PTZ00452 249 TIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQLKIQ 328 (375)
T ss_pred EeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhhccEEEecccccccCHHHHHHHHHHHhCCCCceeE
Confidence 67777663 2344432 235667777777665332 2267899999999999999999876621 2
Q ss_pred cccCCCcchhhHhHHHHhhhh
Q psy5911 362 VKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 362 ~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+..+.++..++=.|++++|..
T Consensus 329 v~~~~~r~~~aW~GgSilasl 349 (375)
T PTZ00452 329 VAAPPDRRFSAWIGGSIQCTL 349 (375)
T ss_pred EecCCCcceeEEECchhhcCc
Confidence 333445667777888888753
No 105
>PTZ00281 actin; Provisional
Probab=99.34 E-value=2.4e-11 Score=141.56 Aligned_cols=304 Identities=14% Similarity=0.146 Sum_probs=184.7
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC---------cEEEcHHHHHhhhhCCCchhhhchhhh
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN---------RIIVGLPAKRQAITNPNNTLYAIKRLI 74 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~---------~~~vG~~A~~~~~~~~~~~~~~~k~~l 74 (1242)
..|-||+|+.++++++..+..|..+ +||+|+...+. ..++|+.|.... .
T Consensus 7 ~~vViD~Gs~~~k~G~age~~P~~i--------~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~---~----------- 64 (376)
T PTZ00281 7 QALVIDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR---G----------- 64 (376)
T ss_pred CeEEEECCCCeEEEeeCCCCCCCee--------ccccceeecCcccccCcccCCeEECchhhccc---c-----------
Confidence 3688999999999999876666543 46766654321 233444432100 0
Q ss_pred CCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHH
Q psy5911 75 GRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQA 154 (1242)
Q Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~ 154 (1242)
.+ .+...+++..+...+....+++++..... .....-..+++|-|..+...+|+.
T Consensus 65 ----------------~~--------~l~~Pi~~G~i~dwd~~e~l~~~~f~~~l-~v~p~~~pvllte~~~~~~~~re~ 119 (376)
T PTZ00281 65 ----------------IL--------TLKYPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREK 119 (376)
T ss_pred ----------------Cc--------EEeccCcCCEEcCHHHHHHHHHHHHHhhc-cCCCccCeEEEecCCCCcHHHHHH
Confidence 00 01112233445556677777777654211 122233568889999999999999
Q ss_pred HHH-HHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHH
Q psy5911 155 TKD-AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDF 233 (1242)
Q Consensus 155 ~~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~i 233 (1242)
|.+ ..+..+++-+.+...|.+++++++. .+-||+|+|.+.+.++-+.-+. .+........+||.++
T Consensus 120 l~e~lFE~~~vp~~~~~~~~~ls~ya~g~------~tglVVDiG~~~t~v~PV~dG~-------~~~~~~~~~~~GG~~l 186 (376)
T PTZ00281 120 MTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVMDSGDGVSHTVPIYEGY-------ALPHAILRLDLAGRDL 186 (376)
T ss_pred HHHHHhcccCCceeEeeccHHHHHHhcCC------ceEEEEECCCceEEEEEEEecc-------cchhheeeccCcHHHH
Confidence 877 5567899999999999999998764 3558889999999987654221 1222223346899999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce------------eeeeccccccCCCCCeeeEEEE
Q psy5911 234 DMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ------------TDINLPYITADKNGPKHLNVKI 301 (1242)
Q Consensus 234 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------------~~i~i~~~~~~~~~~~~~~~~i 301 (1242)
++.|.+.|..+ +..... .. -...++.+|+.++.... ......+...+ ...+.+
T Consensus 187 t~~L~~lL~~~-----~~~~~~-~~----~~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~y~LPd-----g~~i~i 251 (376)
T PTZ00281 187 TDYMMKILTER-----GYSFTT-TA----EREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPD-----GQVITI 251 (376)
T ss_pred HHHHHHHHHhc-----CCCCCc-HH----HHHHHHHHHHhcEEecCCchHHHHhhhcCcccceeEECCC-----CCEEEe
Confidence 99998887543 111111 10 12346677776542210 00000111111 124566
Q ss_pred cHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCcC--CcceEEEecCccChHHHHHHHHHhcc--------cccc
Q psy5911 302 TRSKLE---SLVEDLI-----SKSLKPCEVALNDAKIDKS--KISEIILVGGQTRMPLVQKMVSEFFE--------KEVK 363 (1242)
Q Consensus 302 tr~~fe---~l~~~~~-----~~i~~~i~~~l~~~~~~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~--------~~~~ 363 (1242)
..+.|. -+++|.+ ..+.++|.+++..+..+.. -.+.|+|+||+|.+|.+.++|+..+. .++.
T Consensus 252 ~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~El~~~~p~~~~v~v~ 331 (376)
T PTZ00281 252 GNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKII 331 (376)
T ss_pred eHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHHHhhccccCccccCcCHHHHHHHHHHHhCCCCcceEEe
Confidence 665542 2444432 1456677777776543321 25789999999999999999987662 1234
Q ss_pred cCCCcchhhHhHHHHhhhh
Q psy5911 364 KDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 364 ~~~~p~~ava~GAa~~a~~ 382 (1242)
.+.++..++=+||+++|..
T Consensus 332 ~~~~r~~~aW~Ggsilasl 350 (376)
T PTZ00281 332 APPERKYSVWIGGSILASL 350 (376)
T ss_pred cCCCCceeEEECcccccCc
Confidence 4556778888899888863
No 106
>PTZ00004 actin-2; Provisional
Probab=99.30 E-value=7.6e-11 Score=137.68 Aligned_cols=298 Identities=15% Similarity=0.171 Sum_probs=183.8
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC---------CcEEEcHHHHHhhhhCCCchhhhchhhh
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED---------NRIIVGLPAKRQAITNPNNTLYAIKRLI 74 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---------~~~~vG~~A~~~~~~~~~~~~~~~k~~l 74 (1242)
..|-||+|+.++++++..+..|..+ +||+++...+ ...++|+.+.... . ..
T Consensus 7 ~~vViD~Gs~~~k~G~ag~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~-~~------ 66 (378)
T PTZ00004 7 NAAVVDNGSGMVKAGFAGDDAPRCV--------FPSIVGRPKNPGIMVGMEEKDCYVGDEAQDKR-----G-IL------ 66 (378)
T ss_pred CeEEEECCCCeEEEeeCCCCCCCEE--------ccceeEEecccccccCcCCCceEECchhhccc-----c-cc------
Confidence 4689999999999999876666533 4777765432 1234554442200 0 00
Q ss_pred CCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhc--CCCCcEEEEecCCCCHHHH
Q psy5911 75 GRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLN--EKIEKAVITVPAYFNDSQR 152 (1242)
Q Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~--~~~~~~vitVPa~f~~~qr 152 (1242)
.+...+.+..+.-.+....+++++... .++ ..-..+++|-|..++..+|
T Consensus 67 --------------------------~l~~Pi~~G~i~d~d~~e~i~~~~~~~---~l~v~~~~~pvllte~~~~~~~~r 117 (378)
T PTZ00004 67 --------------------------TLKYPIEHGIVTNWDDMEKIWHHTFYN---ELRVAPEEHPVLLTEAPLNPKANR 117 (378)
T ss_pred --------------------------eEcccCcCCEEcCHHHHHHHHHHHHHh---hcccCCccCcceeecCCCCcHHHH
Confidence 011122333455567777778775432 222 2345688999999999999
Q ss_pred HHHHHH-HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchH
Q psy5911 153 QATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGE 231 (1242)
Q Consensus 153 ~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 231 (1242)
+.+.+. .+..|++.+.+.++|.+|+++++. .+-+|+|+|.+.++++-+.-+ +.+.....-.++||.
T Consensus 118 ~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~------~tglVVDiG~~~t~v~pV~dG-------~~l~~~~~~~~~GG~ 184 (378)
T PTZ00004 118 EKMTQIMFETHNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEG-------YSLPHAIHRLDVAGR 184 (378)
T ss_pred HHHHHHHHhhcCCceEEeeccHHHHHHhcCC------ceEEEEECCCCcEEEEEEECC-------EEeecceeeecccHH
Confidence 887665 467799999999999999998754 345888999999999877421 122222333468999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc-----------------eeeeeccccccCCCCC
Q psy5911 232 DFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE-----------------QTDINLPYITADKNGP 294 (1242)
Q Consensus 232 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------------~~~i~i~~~~~~~~~~ 294 (1242)
++++.|.+.|..+ +..+... . -...++.+|+.+.... .....+| +
T Consensus 185 ~lt~~L~~lL~~~-----~~~~~~~--~---~~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~~y~lP----d---- 246 (378)
T PTZ00004 185 DLTEYMMKILHER-----GTTFTTT--A---EKEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYEESYELP----D---- 246 (378)
T ss_pred HHHHHHHHHHHhc-----CCCCCcH--H---HHHHHHHHhhcceeecCCHHHHHhhhhcCccccceEEECC----C----
Confidence 9999999987543 1111111 0 1223555665543211 0111221 1
Q ss_pred eeeEEEEcHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCCc--CCcceEEEecCccChHHHHHHHHHhcc----
Q psy5911 295 KHLNVKITRSKLE---SLVEDL------ISKSLKPCEVALNDAKIDK--SKISEIILVGGQTRMPLVQKMVSEFFE---- 359 (1242)
Q Consensus 295 ~~~~~~itr~~fe---~l~~~~------~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~---- 359 (1242)
.-.+.+..+.|. -+++|- ...+.++|.+++..+..+. .-...|+|+||+|.+|.+.++|...+.
T Consensus 247 -g~~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL~~~~p 325 (378)
T PTZ00004 247 -GTIITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGNIVLSGGTTMYRGLPERLTKELTTLAP 325 (378)
T ss_pred -CCEEEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChhHHHHHHhhEEeccchhcCcCHHHHHHHHHHHhCC
Confidence 123556666553 345553 2245677777777665432 225779999999999999999987662
Q ss_pred ----cccccCCCcchhhHhHHHHhhhh
Q psy5911 360 ----KEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 360 ----~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
.++....++..++=.||+++|..
T Consensus 326 ~~~~~~v~~~~~~~~~aW~Ggsilas~ 352 (378)
T PTZ00004 326 STMKIKVVAPPERKYSVWIGGSILSSL 352 (378)
T ss_pred CCccEEEecCCCCceeEEECcccccCc
Confidence 12334556777778888888753
No 107
>PTZ00466 actin-like protein; Provisional
Probab=99.28 E-value=1.6e-10 Score=134.27 Aligned_cols=302 Identities=18% Similarity=0.157 Sum_probs=184.9
Q ss_pred EEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC---------cEEEcHHHHHhhhhCCCchhhhchhhhC
Q psy5911 5 IIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN---------RIIVGLPAKRQAITNPNNTLYAIKRLIG 75 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~---------~~~vG~~A~~~~~~~~~~~~~~~k~~lg 75 (1242)
.|-||+|+.++++++..+..|.++ +||+|+..... ..++|.+|.... .
T Consensus 14 ~iViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~k~~~~~~~~~~~~~~vG~~~~~~~--~------------- 70 (380)
T PTZ00466 14 PIIIDNGTGYIKAGFAGEDVPNLV--------FPSYVGRPKYKRVMAGAVEGNIFVGNKAEEYR--G------------- 70 (380)
T ss_pred eEEEECCCCcEEEeeCCCCCCCEe--------ccceeeeecCccccccCCCCCeEECchhhhhC--c-------------
Confidence 588999999999999876666543 46666654321 234454443210 0
Q ss_pred CCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHH
Q psy5911 76 RKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQAT 155 (1242)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~ 155 (1242)
.-.+...+....+.-.+....+++++.+... ....-..+++|-|..++..+|+.+
T Consensus 71 -----------------------~~~l~~Pi~~G~v~dwd~~e~iw~~~f~~l~--v~~~~~pvllte~~~~~~~~re~~ 125 (380)
T PTZ00466 71 -----------------------LLKVTYPINHGIIENWNDMENIWIHVYNSMK--INSEEHPVLLTEAPLNPQKNKEKI 125 (380)
T ss_pred -----------------------CceeCccccCCeECCHHHHHHHHHHHHhhcc--cCCccCeEEEecCccccHHHHHHH
Confidence 0001122334456667777888888764321 222345688999999999999998
Q ss_pred HHH-HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHH
Q psy5911 156 KDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFD 234 (1242)
Q Consensus 156 ~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD 234 (1242)
.+. .+..+++.+.+.+.|.+|+++++. .+-+|+|+|.+.+.++-+.-+ +.+........+||.+++
T Consensus 126 ~e~lFE~~~~p~~~~~~~~~lsl~a~g~------~tglVVD~G~~~t~v~PV~~G-------~~~~~~~~~~~~GG~~lt 192 (380)
T PTZ00466 126 AEVFFETFNVPALFISIQAILSLYSCGK------TNGTVLDCGDGVCHCVSIYEG-------YSITNTITRTDVAGRDIT 192 (380)
T ss_pred HHHHhccCCCCeEEEecchHHHHHhcCC------ceEEEEeCCCCceEEEEEECC-------EEeecceeEecCchhHHH
Confidence 665 566789999999999999998864 356888999999999766421 112222223468999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc-----------eeeeeccccccCCCCCeeeEEEEcH
Q psy5911 235 MRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE-----------QTDINLPYITADKNGPKHLNVKITR 303 (1242)
Q Consensus 235 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------~~~i~i~~~~~~~~~~~~~~~~itr 303 (1242)
+.|.+.|..+ +..... . .-+..++.+|+.++... ......++...+ ...+.+..
T Consensus 193 ~~L~~lL~~~-----~~~~~~-~----~~~~~v~~iKe~~c~v~~d~~~e~~~~~~~~~~~~y~LPd-----g~~i~l~~ 257 (380)
T PTZ00466 193 TYLGYLLRKN-----GHLFNT-S----AEMEVVKNMKENCCYVSFNMNKEKNSSEKALTTLPYILPD-----GSQILIGS 257 (380)
T ss_pred HHHHHHHHhc-----CCCCCc-H----HHHHHHHHHHHhCeEecCChHHHHhhccccccceeEECCC-----CcEEEEch
Confidence 9998877532 111111 0 11334556666554211 000001111111 23466777
Q ss_pred HHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCc--CCcceEEEecCccChHHHHHHHHHhccc--------ccccC
Q psy5911 304 SKLE---SLVEDLI-----SKSLKPCEVALNDAKIDK--SKISEIILVGGQTRMPLVQKMVSEFFEK--------EVKKD 365 (1242)
Q Consensus 304 ~~fe---~l~~~~~-----~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~~~~~ 365 (1242)
+.|. -+++|-+ ..+.++|.+.+..+..+. .-...|+|+||+|.+|.+.++|+..+.. .+...
T Consensus 258 er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~~~ 337 (380)
T PTZ00466 258 ERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRISAP 337 (380)
T ss_pred HHhcCcccccCccccCCCCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCCCceEEEecC
Confidence 6663 2444422 145667777777665432 2267899999999999999999877621 23344
Q ss_pred CCcchhhHhHHHHhhhh
Q psy5911 366 INPDEAVAVGASVQAGV 382 (1242)
Q Consensus 366 ~~p~~ava~GAa~~a~~ 382 (1242)
.++..++=+||+++|..
T Consensus 338 ~~r~~~aW~GgSilasl 354 (380)
T PTZ00466 338 PERKFSTFIGGSILASL 354 (380)
T ss_pred CCCceeEEECchhhcCc
Confidence 56667778898888753
No 108
>PTZ00280 Actin-related protein 3; Provisional
Probab=99.25 E-value=5e-10 Score=132.69 Aligned_cols=229 Identities=15% Similarity=0.086 Sum_probs=140.1
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHccCCCCC----C
Q psy5911 753 PPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKP----D 827 (1242)
Q Consensus 753 ~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~----~ 827 (1242)
--+....+++++...... ....-..+++|.|..++..+|+.+.+.+ +..+++.+.+..+|.+|++++...... .
T Consensus 80 dwd~~e~l~~~~~~~~L~-~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g 158 (414)
T PTZ00280 80 DWDLMEKFWEQCIFKYLR-CEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGG 158 (414)
T ss_pred CHHHHHHHHHHHHHHhhc-cCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCC
Confidence 345556677765432111 1222345899999999999999987755 566999999999999999987432211 2
Q ss_pred CcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHH
Q psy5911 828 DRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAA 907 (1242)
Q Consensus 828 ~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 907 (1242)
..+-||+|+|.|+++++.+.-. . .+.....-..+||.++++.|.++|.++.. .+... .....+
T Consensus 159 ~~tglVVDiG~~~T~i~PV~~G------~-~l~~~~~~~~~GG~~lt~~L~~lL~~~~~-----~~~~~-----~~~~~~ 221 (414)
T PTZ00280 159 TLTGTVIDSGDGVTHVIPVVDG------Y-VIGSSIKHIPLAGRDITNFIQQMLRERGE-----PIPAE-----DILLLA 221 (414)
T ss_pred ceeEEEEECCCCceEEEEEECC------E-EcccceEEecCcHHHHHHHHHHHHHHcCC-----CCCcH-----HHHHHH
Confidence 2345888999999999887522 1 11122223468999999999999865321 11111 012345
Q ss_pred HHhhhhccCCce-------------eeEEeccccccCCCCeeeEEEEcHHHHHH---HHHHHH------HHHHHHHHHHH
Q psy5911 908 EKAKIELSNAEQ-------------TDINLPYITADKNGPKHLNVKITRSKLES---LVEDLI------SKSLKPCEVAL 965 (1242)
Q Consensus 908 e~~K~~Ls~~~~-------------~~i~i~~~~~~~~~~~~~~~~itr~~fe~---~~~~~~------~~~~~~i~~~l 965 (1242)
+.+|+.++.... ......+...+..++....+.+..+.|.- ++.|-+ ..+.++|.+++
T Consensus 222 ~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI 301 (414)
T PTZ00280 222 QRIKEKYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAI 301 (414)
T ss_pred HHHHHhcCcccCcHHHHHHHhhcCcccccceEECCCCCCCCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHH
Confidence 566665532110 00000011111111233467777777653 444532 14567777888
Q ss_pred HhcCCCcc--CcceEEEecCcCchHHHHHHHHhhhc
Q psy5911 966 NDAKIDKS--KISEIILVGGQTRMPLVQKMVSEFFE 999 (1242)
Q Consensus 966 ~~~~~~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~ 999 (1242)
..+..+.. -.+.|+|+||+|.+|.+.++|++.+.
T Consensus 302 ~~~~~d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El~ 337 (414)
T PTZ00280 302 QSCPIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDVR 337 (414)
T ss_pred HhCChhhHHHHhhcEEEeCCcccCcCHHHHHHHHHH
Confidence 77654322 26779999999999999999988774
No 109
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=99.20 E-value=8.9e-10 Score=126.11 Aligned_cols=208 Identities=17% Similarity=0.253 Sum_probs=136.9
Q ss_pred CCcEE--EEecCCCCHHHH-HHHHHHHHHc------C------CceeeeechhHHHHHHccCCCC-------CCCcEEEE
Q psy5911 776 IEKAV--ITVPAYFNDSQR-QATKDAGKIA------G------LEVLRIINEPTAAALAYGLDKK-------PDDRIIVV 833 (1242)
Q Consensus 776 ~~~~V--itVPa~~~~~qr-~~~~~Aa~~A------G------l~~~~li~Ep~AAal~y~~~~~-------~~~~~vlV 833 (1242)
+..++ ...|..+-..++ +.+++..... | +..+.++.||.+|.+.+..+.. .....++|
T Consensus 110 ~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~ilv 189 (344)
T PRK13917 110 VVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVVADKAFEEGKVSV 189 (344)
T ss_pred cceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcccchhcccCcEEE
Confidence 44444 588998854443 6666654321 1 2346789999999887765422 13456899
Q ss_pred EeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhh
Q psy5911 834 YDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIE 913 (1242)
Q Consensus 834 ~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ 913 (1242)
+|+|+||+|++++.- +.+ +...++....|..++.+.+.+++..+.. +..+ +.. ++.+..+.-
T Consensus 190 IDIG~~TtD~~v~~~------~~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~~---~~~~--~~~---~ie~~l~~g--- 251 (344)
T PRK13917 190 IDFGSGTTDLDTIQN------LKR-VEEESFVIPKGTIDVYKRIASHISKKEE---GASI--TPY---MLEKGLEYG--- 251 (344)
T ss_pred EEcCCCcEEEEEEeC------cEE-cccccccccchHHHHHHHHHHHHHhhCC---CCCC--CHH---HHHHHHHcC---
Confidence 999999999999862 222 2233444567999999999888854322 2221 111 122121111
Q ss_pred ccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHH
Q psy5911 914 LSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKM 993 (1242)
Q Consensus 914 Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~ 993 (1242)
.+.+. +.. .+.+ ++++.++++++++++.+.+...+.+ ..+++.|+|+||++++ +++.
T Consensus 252 -------~i~~~-------~~~--~id~-~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~~ 308 (344)
T PRK13917 252 -------ACKLN-------QKT--VIDF-KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFDS 308 (344)
T ss_pred -------cEEeC-------CCc--eEeh-HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHHH
Confidence 11110 001 1223 4567788999999998888888754 3479999999999987 7899
Q ss_pred HHhhhcccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 994 VSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 994 l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
|++.|+. +....||..|.|+|...+|..+.+
T Consensus 309 lk~~f~~-~~~~~~p~~ANa~G~~~~g~~~~~ 339 (344)
T PRK13917 309 LSHWYSD-VEKADESQFANVRGYYKYGELLKN 339 (344)
T ss_pred HHHHcCC-eEEcCChHHHHHHHHHHHHHHHhc
Confidence 9999975 356789999999999999876654
No 110
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=99.16 E-value=7.7e-10 Score=131.23 Aligned_cols=309 Identities=19% Similarity=0.226 Sum_probs=178.8
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCC----cEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCC
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN----RIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 720 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~----~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d 720 (1242)
++-+|.|+.++.+++.....|. ..+||++....+. ...+|..+... .+..
T Consensus 6 ~vViD~Gs~~~k~G~age~~P~--------~v~ps~~~~~~~~~~~~~~~~g~~~~~~---~~~~--------------- 59 (393)
T PF00022_consen 6 PVVIDNGSSTIKAGFAGEDLPR--------VVIPSVVGRPRDKNSSNDYYVGDEALSP---RSNL--------------- 59 (393)
T ss_dssp EEEEEECSSEEEEEETTSSS-S--------EEEESEEEEESSSSSSSSCEETHHHHHT---GTGE---------------
T ss_pred EEEEECCCceEEEEECCCCCCC--------CcCCCccccccccccceeEEeecccccc---hhhe---------------
Confidence 4568999999988885433333 2357887765432 35677663321 0000
Q ss_pred hhHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHH-H
Q psy5911 721 EIVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA-G 799 (1242)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~A-a 799 (1242)
. ....+....+.--+....+++++..... .....-..++++.|..++..+|+.+.+. .
T Consensus 60 ------------~--------~~~p~~~g~i~~~~~~e~i~~~~~~~~l-~~~~~~~~vll~~~~~~~~~~r~~l~e~lf 118 (393)
T PF00022_consen 60 ------------E--------LRSPIENGVIVDWDALEEIWDYIFSNLL-KVDPSDHPVLLTEPPFNPRSQREKLAEILF 118 (393)
T ss_dssp ------------E--------EEESEETTEESSHHHHHHHHHHHHHTTT--SSGGGSEEEEEESTT--HHHHHHHHHHHH
T ss_pred ------------e--------eeeecccccccccccccccccccccccc-ccccccceeeeeccccCCchhhhhhhhhhh
Confidence 0 0001112223334555666666655431 1222345699999999999999988775 5
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+..|++.+.++++|.+|+++++... -||+|+|.+.+.++.+.- + +.+........+||.++++.|.+
T Consensus 119 E~~~~~~v~~~~~~~~a~~~~g~~t------glVVD~G~~~t~v~pV~d------G-~~~~~~~~~~~~GG~~lt~~l~~ 185 (393)
T PF00022_consen 119 EKFGVPSVYFIPSPLLALYASGRTT------GLVVDIGYSSTSVVPVVD------G-YVLPHSIKRSPIGGDDLTEYLKE 185 (393)
T ss_dssp HTS--SEEEEEEHHHHHHHHTTBSS------EEEEEESSS-EEEEEEET------T-EE-GGGBEEES-SHHHHHHHHHH
T ss_pred cccccceeeeeeccccccccccccc------ccccccceeeeeeeeeee------c-cccccccccccccHHHHHHHHHH
Confidence 6789999999999999999997753 488899999999988741 1 22222222356799999999999
Q ss_pred HHHHH-hhhhcCCCCC------CCHHHHHHHHHHHHHhhhhcc---C------------CceeeEEeccccccCCCCeee
Q psy5911 880 HLIYE-FKIENGVDLS------GDSLAMQRLKEAAEKAKIELS---N------------AEQTDINLPYITADKNGPKHL 937 (1242)
Q Consensus 880 ~l~~~-~~~~~~~~~~------~~~~~~~~L~~~~e~~K~~Ls---~------------~~~~~i~i~~~~~~~~~~~~~ 937 (1242)
+|..+ +......... ........-....+.+|+.+. . .....+.+| ++ .
T Consensus 186 lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~lP------dg---~ 256 (393)
T PF00022_consen 186 LLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVEEIKEECCYVSEDPDEEQEEQASENPEKSYELP------DG---Q 256 (393)
T ss_dssp HHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHHHHHHHHHSGGSSHHHHHHHHHCSTTTEEEE-T------TS---S
T ss_pred HHHhhccccccccccccccccccccccchhhhccchhccchhhhcccccccccccccccccceecccc------cc---c
Confidence 98874 1111000000 011101111222333333321 1 111222222 11 2
Q ss_pred EEEEcHHHHHHHHHHHHH----------------HHHHHHHHHHHhcCCCccC--cceEEEecCcCchHHHHHHHHhhhc
Q psy5911 938 NVKITRSKLESLVEDLIS----------------KSLKPCEVALNDAKIDKSK--ISEIILVGGQTRMPLVQKMVSEFFE 999 (1242)
Q Consensus 938 ~~~itr~~fe~~~~~~~~----------------~~~~~i~~~l~~~~~~~~~--i~~ViLvGG~s~ip~v~~~l~~~f~ 999 (1242)
.+.+..+.|. +.+.+|. .+.++|.+++.....+... .+.|+|+||+|++|.+.++|...+.
T Consensus 257 ~i~~~~er~~-~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~~si~~~~~d~r~~l~~nIvl~GG~S~i~G~~eRL~~eL~ 335 (393)
T PF00022_consen 257 TIILGKERFR-IPEILFNPSLIGIDSASEPSEFMGLPELILDSISKCPIDLRKELLSNIVLTGGSSLIPGFKERLQQELR 335 (393)
T ss_dssp EEEESTHHHH-HHHTTTSGGGGTSSSTS---SSSCHHHHHHHHHHTSTTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHH
T ss_pred cccccccccc-ccccccccccccccccccccccchhhhhhhhhhhccccccccccccceEEecccccccchHHHHHHHhh
Confidence 5666665553 3343332 5778888888877643322 6789999999999999999987763
Q ss_pred c--------cccccC-CcchhhhhhHHHhhhhh
Q psy5911 1000 K--------EVKKDI-NPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 1000 ~--------~v~~~~-~p~~aVa~GAa~~a~~l 1023 (1242)
. ++.... +|..++=.||+++|..-
T Consensus 336 ~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl~ 368 (393)
T PF00022_consen 336 SLLPSSTKVKVIAPPSDRQFAAWIGGSILASLS 368 (393)
T ss_dssp HHSGTTSTEEEE--T-TTTSHHHHHHHHHHTSG
T ss_pred hhhhccccceeccCchhhhhcccccceeeeccc
Confidence 2 244455 89999999999999754
No 111
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=99.15 E-value=1.2e-09 Score=124.62 Aligned_cols=205 Identities=20% Similarity=0.213 Sum_probs=127.0
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHHHHHc---------CCCeeeeechHHHHHHHhccCCC---CCCcEEEEEEeCCccee
Q psy5911 135 KIEKAVITVPAYFNDSQRQATKDAGKIA---------GLEVLRIINEPTAAALAYGLDKK---PDDRIIVVYDLGGGTFD 202 (1242)
Q Consensus 135 ~~~~~vitVPa~f~~~qr~~~~~Aa~~A---------Gl~~~~li~Ep~AAal~y~~~~~---~~~~~vlV~D~GggT~D 202 (1242)
.+..+|+..|..+...+|+.+++..... -+..+.+++||.+|.+.+..+.. .....++|+|+|++|+|
T Consensus 101 ~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~~~~~~~~~~lVIDIG~~TtD 180 (320)
T TIGR03739 101 EIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHGKLLTGKEQSLIIDPGYFTFD 180 (320)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCCCcccCcCcEEEEecCCCeee
Confidence 3567999999999998999998876532 23557899999999888754321 24566899999999999
Q ss_pred eeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeee
Q psy5911 203 ISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDI 282 (1242)
Q Consensus 203 vsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i 282 (1242)
+.++. + ..+ +....+....|-.++-+.+.+.+.+++. .+...+.. ..+.+ |..... +
T Consensus 181 ~~~~~--~----~~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~g----~~~~~~~~-------~i~~~---l~~g~~--~ 237 (320)
T TIGR03739 181 WLVAR--G----MRL-VQKRSGSVNGGMSDIYRLLAAEISKDIG----TPAYRDID-------RIDLA---LRTGKQ--P 237 (320)
T ss_pred eehcc--C----CEE-cccccCCchhHHHHHHHHHHHHHHhhcC----CCCccCHH-------HHHHH---HHhCCc--e
Confidence 98774 2 223 3445555667888888887777766553 22101111 11111 111100 0
Q ss_pred eccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccc-c
Q psy5911 283 NLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK-E 361 (1242)
Q Consensus 283 ~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~ 361 (1242)
.+ . + + .+.|+ +..+.....++++...+.+.+. ...+++.|+|+||++. .+++.|++.|+. .
T Consensus 238 ~~---~-g----k--~~di~--~~~~~~~~~~~~~v~~i~~~~~----~~~~~~~Iil~GGGa~--ll~~~l~~~f~~~~ 299 (320)
T TIGR03739 238 RI---Y-Q----K--PVDIK--RCLELAETVAQQAVSTMMTWIG----APESIQNIVLVGGGAF--LFKKAVKAAFPKHR 299 (320)
T ss_pred ee---c-c----e--ecCch--HHHHHHHHHHHHHHHHHHHhcc----cCCcccEEEEeCCcHH--HHHHHHHHHCCCCe
Confidence 00 0 0 1 11222 2222333444444443433332 1245899999999987 567889999975 3
Q ss_pred cccCCCcchhhHhHHHHhh
Q psy5911 362 VKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 362 ~~~~~~p~~ava~GAa~~a 380 (1242)
+....||..|.|+|-..++
T Consensus 300 i~~~~dp~~ANarG~~~~g 318 (320)
T TIGR03739 300 IVEVDEPMFANVRGFQIAG 318 (320)
T ss_pred eEecCCcHHHHHHHHHHhh
Confidence 4567899999999987665
No 112
>PTZ00452 actin; Provisional
Probab=99.15 E-value=1.3e-09 Score=126.51 Aligned_cols=236 Identities=16% Similarity=0.128 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHccCCCCCCCcEEE
Q psy5911 754 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIV 832 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vl 832 (1242)
-+....+++|+...... ....-..+++|-|...+..+|+.|.+. .+..+++.+.+.+.|.+++++++.. +-+
T Consensus 79 wd~~e~iw~~~f~~~l~-v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~~------tgl 151 (375)
T PTZ00452 79 WDDIEIIWHHAFYNELC-MSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGKT------IGL 151 (375)
T ss_pred HHHHHHHHHHHHHhhcC-CCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCCc------eee
Confidence 34445566665432211 222345689999999999999998775 4667888999999999999988653 458
Q ss_pred EEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhh
Q psy5911 833 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKI 912 (1242)
Q Consensus 833 V~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 912 (1242)
|+|+|.|.+.++-+.- | +.+........+||.++++.|.++|..+ +....... . ...++.+|+
T Consensus 152 VVDiG~~~t~v~PV~d------G-~~l~~~~~r~~~gG~~lt~~L~~lL~~~-----~~~~~~~~-~----~~~~~~iKe 214 (375)
T PTZ00452 152 VVDSGEGVTHCVPVFE------G-HQIPQAITKINLAGRLCTDYLTQILQEL-----GYSLTEPH-Q----RIIVKNIKE 214 (375)
T ss_pred eecCCCCcceEEEEEC------C-EEeccceEEeeccchHHHHHHHHHHHhc-----CCCCCCHH-H----HHHHHHHHH
Confidence 8899999999987752 1 2222233335689999999998887542 11111111 0 112344454
Q ss_pred hccCCc----------------eeeEEeccccccCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHhc
Q psy5911 913 ELSNAE----------------QTDINLPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALNDA 968 (1242)
Q Consensus 913 ~Ls~~~----------------~~~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~~-----~~~~~~i~~~l~~~ 968 (1242)
.++.-. ...+.+| | .-.+.+..+.|. -+++|-+ ..+.+++.+++..+
T Consensus 215 ~~c~v~~d~~~e~~~~~~~~~~~~~y~LP----D-----g~~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c 285 (375)
T PTZ00452 215 RLCYTALDPQDEKRIYKESNSQDSPYKLP----D-----GNILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKC 285 (375)
T ss_pred HhccccCcHHHHHHHhhccCCcCceEECC----C-----CCEEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhC
Confidence 443110 0112222 1 134667766663 2344432 23567777777766
Q ss_pred CCCc--cCcceEEEecCcCchHHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhhh
Q psy5911 969 KIDK--SKISEIILVGGQTRMPLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 969 ~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
..+. .-.+.|+|+||+|.+|.+.++|...+.. ++..+.++..++=.|++++|..
T Consensus 286 ~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilasl 349 (375)
T PTZ00452 286 DLDLRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCTL 349 (375)
T ss_pred CHhHHHHhhccEEEecccccccCHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcCc
Confidence 5332 2267899999999999999999877621 2334456667788899888863
No 113
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=99.14 E-value=2e-09 Score=125.32 Aligned_cols=179 Identities=14% Similarity=0.153 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHcCCCeeeeechHHHHHHHhc-----cCCCCCCc-EEEEEEeCCcceeeeEEEEEeecCCceEEEEEe
Q psy5911 149 DSQRQATKDAGKIAGLEVLRIINEPTAAALAYG-----LDKKPDDR-IIVVYDLGGGTFDISVIEIANVDGETQFEVLST 222 (1242)
Q Consensus 149 ~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~-----~~~~~~~~-~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~ 222 (1242)
....+.+.++++.||+++..+..+|.|.+-.+. ........ .++++|+|++|++++++.-+. +..
T Consensus 142 ~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~~~~~~~~~~~lvdiG~~~t~l~i~~~g~------~~~--- 212 (348)
T TIGR01175 142 KEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLASRTYRLTDAALVDIGATSSTLNLLHPGR------MLF--- 212 (348)
T ss_pred HHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCccccccCceEEEEEECCCcEEEEEEECCe------EEE---
Confidence 455778889999999999999999999876663 22222233 388889999999999996332 111
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEc
Q psy5911 223 NGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKIT 302 (1242)
Q Consensus 223 ~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~it 302 (1242)
.....+||.+|++.+.+.+ +.+ ...||+.|...+... ..
T Consensus 213 ~r~i~~G~~~i~~~i~~~~--------~~~-----------~~~Ae~~k~~~~~~~-----------------~~----- 251 (348)
T TIGR01175 213 TREVPFGTRQLTSELSRAY--------GLN-----------PEEAGEAKQQGGLPL-----------------LY----- 251 (348)
T ss_pred EEEeechHHHHHHHHHHHc--------CCC-----------HHHHHHHHhcCCCCC-----------------ch-----
Confidence 1224479999998886433 221 357888887532110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc--CCCcCCcceEEEecCccChHHHHHHHHHhccccccc----------------
Q psy5911 303 RSKLESLVEDLISKSLKPCEVALNDA--KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK---------------- 364 (1242)
Q Consensus 303 r~~fe~l~~~~~~~i~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~---------------- 364 (1242)
-.+++++.++++...|.+.++-. ......++.|+|+||+++++.+.+.+++.||.++..
T Consensus 252 ---~~~~~~~~~~~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l~~~v~~~~P~~~~~~~~~~~~~ 328 (348)
T TIGR01175 252 ---DPEVLRRFKGELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRLGLPTEVANPFALMALDAKVDAG 328 (348)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHHCCCeEecChHHhcccCccCCHH
Confidence 02345666677777777777532 223345999999999999999999999999765432
Q ss_pred ---CCCcchhhHhHHHHhh
Q psy5911 365 ---DINPDEAVAVGASVQA 380 (1242)
Q Consensus 365 ---~~~p~~ava~GAa~~a 380 (1242)
...|..++|.|+|+++
T Consensus 329 ~~~~~~~~~~~a~Glalr~ 347 (348)
T TIGR01175 329 RLAVDAPALMTALGLALRG 347 (348)
T ss_pred HHHhhhHHHHHHhhHhhcC
Confidence 1345667888887764
No 114
>PTZ00004 actin-2; Provisional
Probab=99.06 E-value=6.2e-09 Score=121.68 Aligned_cols=234 Identities=15% Similarity=0.138 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHhHhC--CCCCcEEEEecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHccCCCCCCCcE
Q psy5911 754 PQISAEILKKMKSTAETFLN--EKIEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRI 830 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~--~~~~~~VitVPa~~~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~ 830 (1242)
-+....++.++.. ..++ ..-..+++|-|..++..+|+.+.+. .+..|++.+.+..+|.+|+++++. .+
T Consensus 80 ~d~~e~i~~~~~~---~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~------~t 150 (378)
T PTZ00004 80 WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGR------TT 150 (378)
T ss_pred HHHHHHHHHHHHH---hhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCC------ce
Confidence 4555566666432 1222 2334688999999999999887664 577899999999999999998864 34
Q ss_pred EEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHh
Q psy5911 831 IVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKA 910 (1242)
Q Consensus 831 vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 910 (1242)
-+|+|+|.+.++++.+.- + +.+........+||.++++.|.+.|..+- + .+... . -...++..
T Consensus 151 glVVDiG~~~t~v~pV~d------G-~~l~~~~~~~~~GG~~lt~~L~~lL~~~~---~--~~~~~--~---~~~~~~~i 213 (378)
T PTZ00004 151 GIVLDSGDGVSHTVPIYE------G-YSLPHAIHRLDVAGRDLTEYMMKILHERG---T--TFTTT--A---EKEIVRDI 213 (378)
T ss_pred EEEEECCCCcEEEEEEEC------C-EEeecceeeecccHHHHHHHHHHHHHhcC---C--CCCcH--H---HHHHHHHH
Confidence 588899999999987752 1 22223333456899999999999885431 1 11111 1 11234445
Q ss_pred hhhccCC---------------c--eeeEEeccccccCCCCeeeEEEEcHHHHH---HHHHHH------HHHHHHHHHHH
Q psy5911 911 KIELSNA---------------E--QTDINLPYITADKNGPKHLNVKITRSKLE---SLVEDL------ISKSLKPCEVA 964 (1242)
Q Consensus 911 K~~Ls~~---------------~--~~~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~------~~~~~~~i~~~ 964 (1242)
|+.+..- . ...+.+| + .-.+.+..+.|. -++.|- ...+.++|.++
T Consensus 214 Ke~~c~v~~d~~~~~~~~~~~~~~~~~~y~lP----d-----g~~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~s 284 (378)
T PTZ00004 214 KEKLCYIALDFDEEMGNSAGSSDKYEESYELP----D-----GTIITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQS 284 (378)
T ss_pred hhcceeecCCHHHHHhhhhcCccccceEEECC----C-----CCEEEEcHHHeeCcccccChhhcCccccCChHHHHHHH
Confidence 5443211 0 1112222 1 123556665553 245553 23456777788
Q ss_pred HHhcCCCcc--CcceEEEecCcCchHHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhhh
Q psy5911 965 LNDAKIDKS--KISEIILVGGQTRMPLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 965 l~~~~~~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+..+..+.. -...|+|+||+|.+|.+.++|...+.. ++....++..++=.||+++|..
T Consensus 285 I~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas~ 352 (378)
T PTZ00004 285 INKCDIDIRKDLYGNIVLSGGTTMYRGLPERLTKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSSL 352 (378)
T ss_pred HHhCChhHHHHHHhhEEeccchhcCcCHHHHHHHHHHHhCCCCccEEEecCCCCceeEEECcccccCc
Confidence 777654321 267899999999999999999877631 2344556778888888888753
No 115
>PTZ00281 actin; Provisional
Probab=99.04 E-value=1.3e-09 Score=127.05 Aligned_cols=238 Identities=13% Similarity=0.135 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHHHHHhHhC--CCCCcEEEEecCCCCHHHHHHHHH-HHHHcCCceeeeechhHHHHHHccCCCCCCCcE
Q psy5911 754 PQISAEILKKMKSTAETFLN--EKIEKAVITVPAYFNDSQRQATKD-AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRI 830 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~--~~~~~~VitVPa~~~~~qr~~~~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~ 830 (1242)
-+....++.++... .+. ..-..+++|-|..++..+|+.|.+ ..+..+++.+.+...|.+++++++. .+
T Consensus 80 wd~~e~l~~~~f~~---~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~------~t 150 (376)
T PTZ00281 80 WDDMEKIWHHTFYN---ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TT 150 (376)
T ss_pred HHHHHHHHHHHHHh---hccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCC------ce
Confidence 34455566665432 222 223468889999999999999887 5577899999999999999998765 25
Q ss_pred EEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHh
Q psy5911 831 IVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKA 910 (1242)
Q Consensus 831 vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 910 (1242)
-+|+|+|.+.+.++-+.-. +.+........+||.++++.|.+.|..+- ..... .. . ...++.+
T Consensus 151 glVVDiG~~~t~v~PV~dG-------~~~~~~~~~~~~GG~~lt~~L~~lL~~~~-----~~~~~-~~-~---~~~~~~i 213 (376)
T PTZ00281 151 GIVMDSGDGVSHTVPIYEG-------YALPHAILRLDLAGRDLTDYMMKILTERG-----YSFTT-TA-E---REIVRDI 213 (376)
T ss_pred EEEEECCCceEEEEEEEec-------ccchhheeeccCcHHHHHHHHHHHHHhcC-----CCCCc-HH-H---HHHHHHH
Confidence 5888999999998766422 22222333456899999999998875531 11111 10 0 2235556
Q ss_pred hhhccCCc---e---------eeEEeccccccCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHhcCC
Q psy5911 911 KIELSNAE---Q---------TDINLPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALNDAKI 970 (1242)
Q Consensus 911 K~~Ls~~~---~---------~~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~~-----~~~~~~i~~~l~~~~~ 970 (1242)
|+.+..-. . ......+..+| .-.+++..+.|. -++.|-+ ..+.++|.+++..+..
T Consensus 214 Ke~~c~v~~d~~~~~~~~~~~~~~~~~y~LPd-----g~~i~i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~ 288 (376)
T PTZ00281 214 KEKLAYVALDFEAEMQTAASSSALEKSYELPD-----GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDV 288 (376)
T ss_pred HHhcEEecCCchHHHHhhhcCcccceeEECCC-----CCEEEeeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCCh
Confidence 66543110 0 00000111111 123556655442 2444432 1456777777776643
Q ss_pred Ccc--CcceEEEecCcCchHHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhhh
Q psy5911 971 DKS--KISEIILVGGQTRMPLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 971 ~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+.. -.+.|+|+||+|.+|.+.++|+..+.. ++..+.++..++=.||+++|..
T Consensus 289 d~r~~L~~nIvl~GG~s~~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~Ggsilasl 350 (376)
T PTZ00281 289 DIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASL 350 (376)
T ss_pred hHHHHHHhhccccCccccCcCHHHHHHHHHHHhCCCCcceEEecCCCCceeEEECcccccCc
Confidence 321 257899999999999999999877631 2444567778888999988864
No 116
>PTZ00466 actin-like protein; Provisional
Probab=99.01 E-value=1.5e-08 Score=117.85 Aligned_cols=236 Identities=16% Similarity=0.119 Sum_probs=148.3
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHccCCCCCCCcEE
Q psy5911 753 PPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRII 831 (1242)
Q Consensus 753 ~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~v 831 (1242)
--+....+++++.+... ....-..+++|-|..++..+|+.+.+. .+..+++.+.+.++|.+|+++++. .+-
T Consensus 85 dwd~~e~iw~~~f~~l~--v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g~------~tg 156 (380)
T PTZ00466 85 NWNDMENIWIHVYNSMK--INSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCGK------TNG 156 (380)
T ss_pred CHHHHHHHHHHHHhhcc--cCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcCC------ceE
Confidence 34455566666653211 122234688899999999999998664 577788999999999999998864 355
Q ss_pred EEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhh
Q psy5911 832 VVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAK 911 (1242)
Q Consensus 832 lV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 911 (1242)
+|+|+|.+.+.++-+.- + +.+........+||.++++.|.+.+..+ +..... . .-+..++.+|
T Consensus 157 lVVD~G~~~t~v~PV~~------G-~~~~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~~-~----~~~~~v~~iK 219 (380)
T PTZ00466 157 TVLDCGDGVCHCVSIYE------G-YSITNTITRTDVAGRDITTYLGYLLRKN-----GHLFNT-S----AEMEVVKNMK 219 (380)
T ss_pred EEEeCCCCceEEEEEEC------C-EEeecceeEecCchhHHHHHHHHHHHhc-----CCCCCc-H----HHHHHHHHHH
Confidence 88899999999976652 1 2222233335689999999999887542 111110 1 1122344555
Q ss_pred hhccCC-------------c--eeeEEeccccccCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHhc
Q psy5911 912 IELSNA-------------E--QTDINLPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALNDA 968 (1242)
Q Consensus 912 ~~Ls~~-------------~--~~~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~~-----~~~~~~i~~~l~~~ 968 (1242)
+.+..- . ...+.+| + ...+.+..+.|. -++.|-+ ..+.++|.+.+.++
T Consensus 220 e~~c~v~~d~~~e~~~~~~~~~~~~y~LP------d---g~~i~l~~er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c 290 (380)
T PTZ00466 220 ENCCYVSFNMNKEKNSSEKALTTLPYILP------D---GSQILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRA 290 (380)
T ss_pred HhCeEecCChHHHHhhccccccceeEECC------C---CcEEEEchHHhcCcccccCccccCCCCCCHHHHHHHHHHhC
Confidence 544210 0 0112221 1 134667766663 2444422 14566777777766
Q ss_pred CCCcc--CcceEEEecCcCchHHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhhh
Q psy5911 969 KIDKS--KISEIILVGGQTRMPLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 969 ~~~~~--~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
..+.. -...|+|+||+|.+|.+.++|+..+.. .+....++..++=.||+++|..
T Consensus 291 ~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~~~~~r~~~aW~GgSilasl 354 (380)
T PTZ00466 291 DMDLRRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILASL 354 (380)
T ss_pred ChhhHHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCCCceEEEecCCCCceeEEECchhhcCc
Confidence 54322 267899999999999999999877721 2344556677888899888863
No 117
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.97 E-value=1.1e-08 Score=118.11 Aligned_cols=202 Identities=20% Similarity=0.270 Sum_probs=120.3
Q ss_pred HHHHHHHHhHhcCCCCcEEE--------------------EecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhc
Q psy5911 122 KKMKSTAETFLNEKIEKAVI--------------------TVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYG 181 (1242)
Q Consensus 122 ~~l~~~a~~~~~~~~~~~vi--------------------tVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~ 181 (1242)
..+.-.+++++..++.++++ ++| ...-+...++++.|||++..+=-+|.|.+-.|.
T Consensus 92 ~~I~~Ea~~~iP~~~~e~~~D~~vl~~~~~~~~~~~Vll~Aa~----k~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~ 167 (340)
T PF11104_consen 92 EAIRWEAEQYIPFPLEEVVFDYQVLGESEDGEEKMEVLLVAAP----KEIVESYVELFEEAGLKPVAVDVEAFALARLFE 167 (340)
T ss_dssp HHHHHHHGGG-SS----EEEEEEESS-GS-TTSEEEEEEEEEE----HHHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGH
T ss_pred HHHHHHHHhhCCCChhHeEEEEEEeccCCCCCCceEEEEEEEc----HHHHHHHHHHHHHcCCceEEEeehHHHHHHHHH
Confidence 34556677777766555433 222 344666788999999999888777777655443
Q ss_pred cC-----CCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy5911 182 LD-----KKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGD 256 (1242)
Q Consensus 182 ~~-----~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~ 256 (1242)
.. .......++++|+|+.++.++++.-+. +.. ......||.++++.+.+.+.-.
T Consensus 168 ~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~~g~------~~f---~R~i~~G~~~l~~~i~~~~~i~------------ 226 (340)
T PF11104_consen 168 FLEPQLPDEEDAETVALVDIGASSTTVIIFQNGK------PIF---SRSIPIGGNDLTEAIARELGID------------ 226 (340)
T ss_dssp HHHHTST----T-EEEEEEE-SS-EEEEEEETTE------EEE---EEEES-SHHHHHHHHHHHTT--------------
T ss_pred HHHHhCCcccccceEEEEEecCCeEEEEEEECCE------EEE---EEEEeeCHHHHHHHHHHhcCCC------------
Confidence 31 112456789999999999999986322 111 1123579999999998764322
Q ss_pred HHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCcCC
Q psy5911 257 SLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALN--DAKIDKSK 334 (1242)
Q Consensus 257 ~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~--~~~~~~~~ 334 (1242)
..+||+.|..-+-.. +...+.+.+.++++...|++.++ .+......
T Consensus 227 -------~~~Ae~~k~~~~l~~-------------------------~~~~~~l~~~~~~l~~EI~rsl~~y~~~~~~~~ 274 (340)
T PF11104_consen 227 -------FEEAEELKRSGGLPE-------------------------EYDQDALRPFLEELAREIRRSLDFYQSQSGGES 274 (340)
T ss_dssp -------HHHHHHHHHHT-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred -------HHHHHHHHhcCCCCc-------------------------chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 346677776421100 22345566666666666666666 22234457
Q ss_pred cceEEEecCccChHHHHHHHHHhccccccc---------CC----------CcchhhHhHHHHhh
Q psy5911 335 ISEIILVGGQTRMPLVQKMVSEFFEKEVKK---------DI----------NPDEAVAVGASVQA 380 (1242)
Q Consensus 335 i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~---------~~----------~p~~ava~GAa~~a 380 (1242)
|+.|+|+||++++|.+.+.|++.++.++.. +. .|..++|.|.|+.+
T Consensus 275 i~~I~L~Ggga~l~gL~~~l~~~l~~~v~~~~p~~~~~~~~~~~~~~~~~~~~~~avA~GLAlR~ 339 (340)
T PF11104_consen 275 IERIYLSGGGARLPGLAEYLSEELGIPVEVINPFKNIKLDPKINSEYLQEDAPQFAVALGLALRG 339 (340)
T ss_dssp -SEEEEESGGGGSTTHHHHHHHHHTSEEEE--GGGGSB--TTS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCccchhhHHHHHHHHHCCceEEcChHHhCccCcccChhhhhhhhhHHHHHHHHhhcC
Confidence 999999999999999999999999765431 11 36678999999864
No 118
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=98.95 E-value=2.3e-08 Score=114.07 Aligned_cols=205 Identities=19% Similarity=0.188 Sum_probs=126.6
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHHHHHc---------CCceeeeechhHHHHHHccCCCC---CCCcEEEEEeeCCCceE
Q psy5911 775 KIEKAVITVPAYFNDSQRQATKDAGKIA---------GLEVLRIINEPTAAALAYGLDKK---PDDRIIVVYDLGGGTFD 842 (1242)
Q Consensus 775 ~~~~~VitVPa~~~~~qr~~~~~Aa~~A---------Gl~~~~li~Ep~AAal~y~~~~~---~~~~~vlV~D~GggT~d 842 (1242)
.+..+|+..|..+...+++.+++..... -+..+.+++||.+|.+.+..+.. .....++|+|+|++|+|
T Consensus 101 ~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~~~~~~~~~~lVIDIG~~TtD 180 (320)
T TIGR03739 101 EIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHGKLLTGKEQSLIIDPGYFTFD 180 (320)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCCCcccCcCcEEEEecCCCeee
Confidence 3567999999999999999998876532 23457899999999887754321 24566899999999999
Q ss_pred EEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeE
Q psy5911 843 ISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDI 922 (1242)
Q Consensus 843 vsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i 922 (1242)
+.++. + ..+ +...++....|..++-+.+.+.+.+++. .+...+... +..+.+.-|. +
T Consensus 181 ~~~~~--~----~~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~g----~~~~~~~~~---i~~~l~~g~~---------~ 237 (320)
T TIGR03739 181 WLVAR--G----MRL-VQKRSGSVNGGMSDIYRLLAAEISKDIG----TPAYRDIDR---IDLALRTGKQ---------P 237 (320)
T ss_pred eehcc--C----CEE-cccccCCchhHHHHHHHHHHHHHHhhcC----CCCccCHHH---HHHHHHhCCc---------e
Confidence 98774 1 222 3444555667888887777777766654 221011111 1111111110 0
Q ss_pred EeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcc-c
Q psy5911 923 NLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK-E 1001 (1242)
Q Consensus 923 ~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~ 1001 (1242)
.+ .+ -.+.|+ +.-+.....++++...+.+.+. ...+++.|+|+||++. .+++.|++.|+. .
T Consensus 238 ~~--------~g--k~~di~--~~~~~~~~~~~~~v~~i~~~~~----~~~~~~~Iil~GGGa~--ll~~~l~~~f~~~~ 299 (320)
T TIGR03739 238 RI--------YQ--KPVDIK--RCLELAETVAQQAVSTMMTWIG----APESIQNIVLVGGGAF--LFKKAVKAAFPKHR 299 (320)
T ss_pred ee--------cc--eecCch--HHHHHHHHHHHHHHHHHHHhcc----cCCcccEEEEeCCcHH--HHHHHHHHHCCCCe
Confidence 00 00 112222 2222333444444443433332 1245899999999998 567889999975 4
Q ss_pred ccccCCcchhhhhhHHHhh
Q psy5911 1002 VKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 1002 v~~~~~p~~aVa~GAa~~a 1020 (1242)
+....||..|.|+|-..++
T Consensus 300 i~~~~dp~~ANarG~~~~g 318 (320)
T TIGR03739 300 IVEVDEPMFANVRGFQIAG 318 (320)
T ss_pred eEecCCcHHHHHHHHHHhh
Confidence 5567899999999987665
No 119
>KOG0679|consensus
Probab=98.86 E-value=1.4e-07 Score=102.01 Aligned_cols=182 Identities=15% Similarity=0.134 Sum_probs=123.1
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEec--------CCcEEEcHHHHHhhhhCCCchhhhchhhhC
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTE--------DNRIIVGLPAKRQAITNPNNTLYAIKRLIG 75 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~--------~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg 75 (1242)
..|-||.|+..+.+++....-|..+ +||++...- .+..+++..|...
T Consensus 12 ~alViDpGS~~traGyaged~Pk~i--------lPS~~G~~tk~~~d~~~~~~~y~~~~ai~~----------------- 66 (426)
T KOG0679|consen 12 SALVIDPGSHTTRAGYAGEDSPKAI--------LPSVYGKVTKTDGDAEDKKGYYVDENAIHV----------------- 66 (426)
T ss_pred ceEEEeCCCceEeccccCCCCcccc--------ccceeeeeecccCccccccceEeechhccC-----------------
Confidence 3578999999999999877766544 488776421 1122444443321
Q ss_pred CCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHH
Q psy5911 76 RKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQAT 155 (1242)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~ 155 (1242)
+. ++..+.-.+++..+...++..+.++|..+.-.. ....-..++||-|++=+.+.|+.+
T Consensus 67 -pr-------------------~gmEv~~~i~nGlv~dWD~~~~~w~~~~~~~Lk-~~p~ehP~litEp~wN~~~~Rek~ 125 (426)
T KOG0679|consen 67 -PR-------------------PGMEVKTPIKNGLVEDWDLFEMQWRYAYKNQLK-VNPEEHPVLITEPPWNTRANREKL 125 (426)
T ss_pred -CC-------------------CCCeeccchhcCCcccHHHHHHHHHHHHhhhhh-cCccccceeeecCCCCcHHHHHHH
Confidence 00 111122223345566788888999888854322 233345689999998889999887
Q ss_pred HHH-HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHH
Q psy5911 156 KDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFD 234 (1242)
Q Consensus 156 ~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD 234 (1242)
.+. .+...++...|..+|+++|++-|. .+-||+|+|++++.++-+.- |.+-..+.. -..+||+.++
T Consensus 126 ~ElmFE~~nvPAf~L~k~~v~~AFA~Gr------stalVvDiGa~~~svsPV~D------G~Vlqk~vv-ks~laGdFl~ 192 (426)
T KOG0679|consen 126 TELMFEKLNVPAFYLAKTAVCTAFANGR------STALVVDIGATHTSVSPVHD------GYVLQKGVV-KSPLAGDFLN 192 (426)
T ss_pred HHHHHhhcCCceEEEechHHHHHHhcCC------CceEEEEecCCCceeeeeec------ceEeeeeeE-ecccchHHHH
Confidence 765 567788899999999999998764 35688899999999997752 222222222 3568999999
Q ss_pred HHHHHHHHHH
Q psy5911 235 MRIINHLIYE 244 (1242)
Q Consensus 235 ~~l~~~l~~~ 244 (1242)
..+.++|..+
T Consensus 193 ~~~~q~l~~~ 202 (426)
T KOG0679|consen 193 DQCRQLLEPK 202 (426)
T ss_pred HHHHHHHhhc
Confidence 9999998755
No 120
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=98.83 E-value=2.7e-08 Score=113.06 Aligned_cols=172 Identities=19% Similarity=0.275 Sum_probs=97.0
Q ss_pred CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEE-EEEecCCCCcchHHHHHHHHHHHHH
Q psy5911 165 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFE-VLSTNGDTFLGGEDFDMRIINHLIY 243 (1242)
Q Consensus 165 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~-v~~~~~~~~lGG~~iD~~l~~~l~~ 243 (1242)
..+.+++||.||.+.+..... +...+||+|+||+|+|++++. +.+. +-...+...+|-..+-..+.+.|..
T Consensus 141 ~~V~V~PQ~~~A~~~~~~~~~-~~~~~lVVDIGG~T~Dv~~v~-------~~~~~~~~~~~~~~~Gvs~~~~~I~~~l~~ 212 (318)
T PF06406_consen 141 KDVEVFPQSVGAVFDALMDLD-EDESVLVVDIGGRTTDVAVVR-------GGLPDISKCSGTPEIGVSDLYDAIAQALRS 212 (318)
T ss_dssp EEEEEEESSHHHHHHHHHTS--TTSEEEEEEE-SS-EEEEEEE-------GGG--EEEEEEETTSSTHHHHHHHHHHTT-
T ss_pred eeEEEEcccHHHHHHHHHhhc-ccCcEEEEEcCCCeEEeeeec-------CCccccchhccCCchhHHHHHHHHHHHHHH
Confidence 457889999999998866533 346789999999999999885 2222 2234455578988888887776654
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 244 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 323 (1242)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 323 (1242)
. . .+. +. ..++++-.... ....+. ....+ .=..+++.++++..++++.+-|.+
T Consensus 213 ~-~----~~~--s~-------~~~~~ii~~~~--~~~~~~--~~i~~---------~~~~~~v~~~i~~~~~~l~~~i~~ 265 (318)
T PF06406_consen 213 A-G----IDT--SE-------LQIDDIIRNRK--DKGYLR--QVIND---------EDVIDDVSEVIEEAVEELINRILR 265 (318)
T ss_dssp --S----BHH--HH-------HHHHHHHHTTT---HHHHH--HHSSS---------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-c----CCC--cH-------HHHHHHHHhhh--ccceec--ccccc---------hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 000 00 01111100000 000000 00000 001344455555555555555555
Q ss_pred HHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc---cccccCCCcchhhHhHHH
Q psy5911 324 ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE---KEVKKDINPDEAVAVGAS 377 (1242)
Q Consensus 324 ~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~---~~~~~~~~p~~ava~GAa 377 (1242)
.+.+ ..+++.|+||||++. .+.+.|++.|+ ..+....||..|-|+|-+
T Consensus 266 ~~~~----~~~~~~I~~vGGGA~--ll~~~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 266 ELGD----FSDIDRIFFVGGGAI--LLKDAIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp HHTT----S-S-SEEEEESTTHH--HHHHHHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred HHhh----hccCCeEEEECCcHH--HHHHHHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 5432 346889999999975 67888999986 357788999999999954
No 121
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=98.75 E-value=1.4e-07 Score=109.86 Aligned_cols=180 Identities=14% Similarity=0.151 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHHHcCCceeeeechhHHHHHHcc-----CCCCCCCc-EEEEEeeCCCceEEEEEEEeecCCCceEEEEE
Q psy5911 788 NDSQRQATKDAGKIAGLEVLRIINEPTAAALAYG-----LDKKPDDR-IIVVYDLGGGTFDISVIEIANVDGETQFEVLS 861 (1242)
Q Consensus 788 ~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~-----~~~~~~~~-~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~ 861 (1242)
.....+.+.++++.||+++..+..+|.|.+-.+. ........ .++++|+|++++++++++-.. + .
T Consensus 141 ~~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~~~~~~~~~~~lvdiG~~~t~l~i~~~g~------~---~ 211 (348)
T TIGR01175 141 RKEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLASRTYRLTDAALVDIGATSSTLNLLHPGR------M---L 211 (348)
T ss_pred cHHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCccccccCceEEEEEECCCcEEEEEEECCe------E---E
Confidence 3456778899999999999999999999876652 22222233 378889999999999996332 1 1
Q ss_pred ecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEE
Q psy5911 862 TNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKI 941 (1242)
Q Consensus 862 ~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~i 941 (1242)
......+||.++++.+.+.+ +.+ ...||+.|..-+.... .
T Consensus 212 ~~r~i~~G~~~i~~~i~~~~--------~~~-----------~~~Ae~~k~~~~~~~~-----------------~---- 251 (348)
T TIGR01175 212 FTREVPFGTRQLTSELSRAY--------GLN-----------PEEAGEAKQQGGLPLL-----------------Y---- 251 (348)
T ss_pred EEEEeechHHHHHHHHHHHc--------CCC-----------HHHHHHHHhcCCCCCc-----------------h----
Confidence 12234579999998886543 111 3577877764321100 0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCccCcceEEEecCcCchHHHHHHHHhhhcccccc---------------
Q psy5911 942 TRSKLESLVEDLISKSLKPCEVALNDA--KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK--------------- 1004 (1242)
Q Consensus 942 tr~~fe~~~~~~~~~~~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~--------------- 1004 (1242)
-.+++++.++++...|.+.++-. ......++.|+|+||+++++.+.+.+++.|+.++..
T Consensus 252 ----~~~~~~~~~~~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l~~~v~~~~P~~~~~~~~~~~~ 327 (348)
T TIGR01175 252 ----DPEVLRRFKGELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRLGLPTEVANPFALMALDAKVDA 327 (348)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHHCCCeEecChHHhcccCccCCH
Confidence 02345666666766677776532 222345999999999999999999999999865431
Q ss_pred ----cCCcchhhhhhHHHhh
Q psy5911 1005 ----DINPDEAVAVGASVQA 1020 (1242)
Q Consensus 1005 ----~~~p~~aVa~GAa~~a 1020 (1242)
...|..++|.|+|+++
T Consensus 328 ~~~~~~~~~~~~a~Glalr~ 347 (348)
T TIGR01175 328 GRLAVDAPALMTALGLALRG 347 (348)
T ss_pred HHHHhhhHHHHHHhhHhhcC
Confidence 1334667788887764
No 122
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=98.66 E-value=7.2e-07 Score=104.07 Aligned_cols=193 Identities=16% Similarity=0.129 Sum_probs=120.8
Q ss_pred EEEEcCccceEEEEEECCeEEEEe-CCCCCcc-cceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChHH
Q psy5911 6 IGIDLGTTNSCVAVLNNGKPQVIE-NSEGGRT-TPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 83 (1242)
Q Consensus 6 vGID~GTt~s~va~~~~g~~~ii~-~~~g~~~-~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 83 (1242)
+-||.||..+++++..+..|..+. +..+.+. ..++..-...+...+|.++...... +
T Consensus 9 iVIDnGS~~~k~Gfag~~~P~~V~ps~~~~~~~~~~~~~~~~~~~~~v~ne~~~~~~~-~-------------------- 67 (444)
T COG5277 9 IVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEAQNDRDN-S-------------------- 67 (444)
T ss_pred EEEeCCCceEEeeecCCCCceeecccccccccccccccccccccccccCchhhhccCC-c--------------------
Confidence 889999999999999887776553 3333332 2222221112233445444321100 0
Q ss_pred HHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHH-HhHhcCCCCcEEEEecCCCCHHHHHHHHH-HHHH
Q psy5911 84 QTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTA-ETFLNEKIEKAVITVPAYFNDSQRQATKD-AGKI 161 (1242)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a-~~~~~~~~~~~vitVPa~f~~~qr~~~~~-Aa~~ 161 (1242)
.......+....+...+....+++++...- .......-..+++|-|..+...+|+.+.+ ..+.
T Consensus 68 ---------------~~~~~~p~~~g~i~~W~~~e~~w~~~~~~~~~~~~~~~~~pllltep~~n~~~~re~~~e~~fE~ 132 (444)
T COG5277 68 ---------------LLELRYPIENGIILNWDAMEQIWDYTFFNKGDLLPSPEEHPLLLTEPPLNPPSNREKITELLFET 132 (444)
T ss_pred ---------------cceeecccccCccCCcHHHHHHHHHhhcchhhccCCCcCCceEEeccCCCcHHHHHHHHHHHHHh
Confidence 001111223344555667777777776653 11112223479999999999999988765 4567
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
..++.+.+..++.+++++.+... .+.+|+|+|.+.++|+-+--+ +.+.....-..+||++++..|.+.|
T Consensus 133 ~~vp~~~~~~~~~l~~ya~g~~~----~~g~ViD~G~~~t~v~PV~DG-------~~l~~a~~ri~~gG~~it~~l~~lL 201 (444)
T COG5277 133 LNVPALYLAIQAVLSLYASGSSD----ETGLVIDSGDSVTHVIPVVDG-------IVLPKAVKRIDIGGRDITDYLKKLL 201 (444)
T ss_pred cCCcceEeeHHHHHHHHhcCCCC----CceEEEEcCCCceeeEeeecc-------ccccccceeeecCcHHHHHHHHHHH
Confidence 78888888888888888776532 467899999999999877422 2222223334579999999998888
Q ss_pred HHHH
Q psy5911 242 IYEF 245 (1242)
Q Consensus 242 ~~~~ 245 (1242)
....
T Consensus 202 ~~~~ 205 (444)
T COG5277 202 REKY 205 (444)
T ss_pred hhcc
Confidence 7643
No 123
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=98.64 E-value=2.8e-06 Score=93.23 Aligned_cols=171 Identities=17% Similarity=0.189 Sum_probs=100.7
Q ss_pred eeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHH
Q psy5911 168 RIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKI 247 (1242)
Q Consensus 168 ~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~ 247 (1242)
..++|.+|-+.+...-.+ ..+ .|+|+||..+-+..++ + +.+.-.........|+..|.+.+++.+-
T Consensus 73 ~~~~ei~~~~~g~~~~~~-~~~--~vidiGgqd~k~i~~~--~----g~~~~~~~n~~ca~Gtg~f~e~~a~~l~----- 138 (248)
T TIGR00241 73 KIVTEISCHGKGANYLAP-EAR--GVIDIGGQDSKVIKID--D----GKVDDFTMNDKCAAGTGRFLEVTARRLG----- 138 (248)
T ss_pred CceEEhhHHHHHHHHHCC-CCC--EEEEecCCeeEEEEEC--C----CcEeeeeecCcccccccHHHHHHHHHcC-----
Confidence 467788887655432222 222 4779999988877775 3 3443333444455677777777665542
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHhHHhcC----CceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 248 ENGVDLSGDSLAMQRLKEAAEKAKIELSN----AEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 323 (1242)
Q Consensus 248 ~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~----~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 323 (1242)
++ .++++.++..-.. +....+..+.-.. ..+.-..++ ++++..+++.+...+.+
T Consensus 139 ---~~-----------~~e~~~~~~~~~~~~~~~~~c~vf~~s~vi-----~~l~~g~~~---~di~~~~~~~va~~i~~ 196 (248)
T TIGR00241 139 ---VS-----------VEELGSLAEKADRKAKISSMCTVFAESELI-----SLLAAGVKK---EDILAGVYESIAERVAE 196 (248)
T ss_pred ---CC-----------HHHHHHHHhcCCCCCCcCCEeEEEechhHH-----HHHHCCCCH---HHHHHHHHHHHHHHHHH
Confidence 21 1233333322100 0011111100000 000001122 34566666666666666
Q ss_pred HHHHcCCCcCCcc-eEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 324 ALNDAKIDKSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 324 ~l~~~~~~~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
.+...+ ++ .|+|+||.++.|++.+.+++.++.++..+.+|..+.|+|||++
T Consensus 197 ~~~~~~-----~~~~Vvl~GGva~n~~l~~~l~~~lg~~v~~~~~~~~~~AlGaAl~ 248 (248)
T TIGR00241 197 MLQRLK-----IEAPIVFTGGVSKNKGLVKALEKKLGMKVITPPEPQIVGAVGAALL 248 (248)
T ss_pred HHhhcC-----CCCCEEEECccccCHHHHHHHHHHhCCcEEcCCCccHHHHHHHHhC
Confidence 665443 44 7999999999999999999999999999999999999999973
No 124
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.61 E-value=3.2e-07 Score=105.91 Aligned_cols=178 Identities=20% Similarity=0.242 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHcCCceeeeechhHHHHHHccC-----CCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecC
Q psy5911 790 SQRQATKDAGKIAGLEVLRIINEPTAAALAYGL-----DKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNG 864 (1242)
Q Consensus 790 ~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~-----~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~ 864 (1242)
..-+...++++.|||++..+=-+|.|.+-.+.. ........++++|+|+.++.++++.-.. +. ...
T Consensus 136 ~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~~g~------~~---f~R 206 (340)
T PF11104_consen 136 EIVESYVELFEEAGLKPVAVDVEAFALARLFEFLEPQLPDEEDAETVALVDIGASSTTVIIFQNGK------PI---FSR 206 (340)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGHHHHHTST----T-EEEEEEE-SS-EEEEEEETTE------EE---EEE
T ss_pred HHHHHHHHHHHHcCCceEEEeehHHHHHHHHHHHHHhCCcccccceEEEEEecCCeEEEEEEECCE------EE---EEE
Confidence 445667888999999998777777776544433 1112346789999999999999987332 11 112
Q ss_pred CCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHH
Q psy5911 865 DTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRS 944 (1242)
Q Consensus 865 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~ 944 (1242)
....||.++++.+.+.+.-. ..++|+.|..-+-. .+
T Consensus 207 ~i~~G~~~l~~~i~~~~~i~-------------------~~~Ae~~k~~~~l~-------------------------~~ 242 (340)
T PF11104_consen 207 SIPIGGNDLTEAIARELGID-------------------FEEAEELKRSGGLP-------------------------EE 242 (340)
T ss_dssp EES-SHHHHHHHHHHHTT---------------------HHHHHHHHHHT------------------------------
T ss_pred EEeeCHHHHHHHHHHhcCCC-------------------HHHHHHHHhcCCCC-------------------------cc
Confidence 34579999999998764322 34666666542100 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--hcCCCccCcceEEEecCcCchHHHHHHHHhhhccccc---------ccC-------
Q psy5911 945 KLESLVEDLISKSLKPCEVALN--DAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVK---------KDI------- 1006 (1242)
Q Consensus 945 ~fe~~~~~~~~~~~~~i~~~l~--~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~---------~~~------- 1006 (1242)
...+.+.+.++++...|.+.++ .+......|+.|+|+||++++|.+.+.|++.++.++. .+.
T Consensus 243 ~~~~~l~~~~~~l~~EI~rsl~~y~~~~~~~~i~~I~L~Ggga~l~gL~~~l~~~l~~~v~~~~p~~~~~~~~~~~~~~~ 322 (340)
T PF11104_consen 243 YDQDALRPFLEELAREIRRSLDFYQSQSGGESIERIYLSGGGARLPGLAEYLSEELGIPVEVINPFKNIKLDPKINSEYL 322 (340)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHH------SEEEEESGGGGSTTHHHHHHHHHTSEEEE--GGGGSB--TTS-HHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEECCccchhhHHHHHHHHHCCceEEcChHHhCccCcccChhhh
Confidence 2345566667777777777766 2223345799999999999999999999999986543 111
Q ss_pred ---CcchhhhhhHHHhh
Q psy5911 1007 ---NPDEAVAVGASVQA 1020 (1242)
Q Consensus 1007 ---~p~~aVa~GAa~~a 1020 (1242)
.|..++|.|.|++.
T Consensus 323 ~~~~~~~avA~GLAlR~ 339 (340)
T PF11104_consen 323 QEDAPQFAVALGLALRG 339 (340)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhhcC
Confidence 26678999999864
No 125
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=98.57 E-value=7.1e-06 Score=88.00 Aligned_cols=157 Identities=18% Similarity=0.222 Sum_probs=103.8
Q ss_pred HHHHHHHHHHcCCCeeeeechHHHHHHHhccC-----CCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCC
Q psy5911 152 RQATKDAGKIAGLEVLRIINEPTAAALAYGLD-----KKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDT 226 (1242)
Q Consensus 152 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~-----~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~ 226 (1242)
-....+|++.|||+..-+=-|.-|.--+|... .....-.++|+|+|+..+.++++.-+. ..|+ .+.
T Consensus 151 v~~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~~~~a~~~vav~~Igat~s~l~vi~~gk----~ly~-----r~~ 221 (354)
T COG4972 151 VESRIDAFELAGLEPKVLDVESFALLRAYRLLASQFGPEEAAMKVAVFDIGATSSELLVIQDGK----ILYT-----REV 221 (354)
T ss_pred hHHHHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhCCchhhhhheeeeecccceEEEEEECCe----eeeE-----eec
Confidence 34457899999999887877888876666421 112233478999999999999987443 2222 245
Q ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHH
Q psy5911 227 FLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKL 306 (1242)
Q Consensus 227 ~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~f 306 (1242)
.+||+.+.+.+.+.+ +.+ ...++.+|....... +--
T Consensus 222 ~~g~~Qlt~~i~r~~--------~L~-----------~~~a~~~k~~~~~P~-------------------------~y~ 257 (354)
T COG4972 222 PVGTDQLTQEIQRAY--------SLT-----------EEKAEEIKRGGTLPT-------------------------DYG 257 (354)
T ss_pred cCcHHHHHHHHHHHh--------CCC-----------hhHhHHHHhCCCCCC-------------------------chh
Confidence 679999998876542 222 235667776543211 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--cCCCcCCcceEEEecCccChHHHHHHHHHhcccc
Q psy5911 307 ESLVEDLISKSLKPCEVALND--AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE 361 (1242)
Q Consensus 307 e~l~~~~~~~i~~~i~~~l~~--~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~ 361 (1242)
.++..++++.+...|.+.|+- +.-...+|+.|+|.||++.+-.+.+.+.+.++.+
T Consensus 258 ~~vl~~f~~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~qrl~~~ 314 (354)
T COG4972 258 SEVLRPFLGELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQRLSIP 314 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHHHhCCC
Confidence 234555555555555555542 1223456999999999999999999999998754
No 126
>KOG0679|consensus
Probab=98.57 E-value=2.8e-06 Score=92.15 Aligned_cols=117 Identities=13% Similarity=0.097 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHccCCCCCCCcEEE
Q psy5911 754 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIV 832 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vl 832 (1242)
=++..+.++|..+.-.. .+..-.-++||-|++=+.+.|+.+.+. .+...++...+..+|+++|++.|.. +-|
T Consensus 85 WD~~~~~w~~~~~~~Lk-~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~Grs------tal 157 (426)
T KOG0679|consen 85 WDLFEMQWRYAYKNQLK-VNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFANGRS------TAL 157 (426)
T ss_pred HHHHHHHHHHHHhhhhh-cCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhcCCC------ceE
Confidence 36677777777643222 222234689999999999999887764 5777888999999999999988753 468
Q ss_pred EEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHH
Q psy5911 833 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 884 (1242)
Q Consensus 833 V~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 884 (1242)
|+|+|++++.++-+.= |.+-..+. --..+||+.++..+.++|..+
T Consensus 158 VvDiGa~~~svsPV~D------G~Vlqk~v-vks~laGdFl~~~~~q~l~~~ 202 (426)
T KOG0679|consen 158 VVDIGATHTSVSPVHD------GYVLQKGV-VKSPLAGDFLNDQCRQLLEPK 202 (426)
T ss_pred EEEecCCCceeeeeec------ceEeeeee-EecccchHHHHHHHHHHHhhc
Confidence 8899999999998752 22222222 335689999999999998765
No 127
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=98.47 E-value=1.7e-05 Score=97.87 Aligned_cols=336 Identities=20% Similarity=0.262 Sum_probs=188.8
Q ss_pred EEEcHHHHHhhh----hCCCchhhhchhhhCCC--------CCChHH--HH--HhccCCeEEEecCCCCeEEEE-c----
Q psy5911 49 IIVGLPAKRQAI----TNPNNTLYAIKRLIGRK--------YTDEIV--QT--VLKMVPYKIVAADNGDAWVEV-K---- 107 (1242)
Q Consensus 49 ~~vG~~A~~~~~----~~~~~~~~~~k~~lg~~--------~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~-~---- 107 (1242)
+-||.+|..... ......+++.||+|... |+.... +. .....|+.-..++.|.+.+.+ .
T Consensus 330 vRVG~EA~RLa~~r~GtEg~TGlSSPKRYLWDe~~~~q~WRFn~~~~~~~~eP~ata~p~~~liN~~G~~L~~l~~~~~r 409 (1002)
T PF07520_consen 330 VRVGPEAARLASQRRGTEGSTGLSSPKRYLWDERPYEQGWRFNSAYVKSQNEPLATAAPFTNLINDDGQPLYQLDPEDER 409 (1002)
T ss_pred ceecHHHHHHHHHhcCCccccCCCCchhhccCCCccCCCcccCCCCCCCccCchhhhHHHHHhhcccCcchhhhcCcccc
Confidence 348988876543 23445577889988743 111110 00 011222333345566665544 1
Q ss_pred ----CeecChHHHHHHHHHHHHHHHHhHhcCC--------------CCcEEEEecCCCCHHHHHHHHHHHHHc-------
Q psy5911 108 ----DKKLAPPQISAEILKKMKSTAETFLNEK--------------IEKAVITVPAYFNDSQRQATKDAGKIA------- 162 (1242)
Q Consensus 108 ----~~~~~~~~v~a~~L~~l~~~a~~~~~~~--------------~~~~vitVPa~f~~~qr~~~~~Aa~~A------- 162 (1242)
.-.+|=.-+..++|..+..+|.-+.+.+ .+++++|||..-.-.+|+.++++++.|
T Consensus 410 ~pvf~p~ySRSSLMtfML~EiL~QAL~QINSpa~R~r~~~~~~PR~LR~IILT~P~AMPk~Er~ifr~r~~~Ai~LvWk~ 489 (1002)
T PF07520_consen 410 LPVFSPHYSRSSLMTFMLSEILAQALMQINSPAQRLRRGHSDAPRRLRRIILTLPPAMPKPEREIFRRRMEEAIGLVWKA 489 (1002)
T ss_pred CccccccccHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccCCCChhhhheeEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1235556677788888877776655432 557999999999999999988887765
Q ss_pred -CCC---------------------eeeeechHHHHHHHhccC------------------C--C--------CCCcEEE
Q psy5911 163 -GLE---------------------VLRIINEPTAAALAYGLD------------------K--K--------PDDRIIV 192 (1242)
Q Consensus 163 -Gl~---------------------~~~li~Ep~AAal~y~~~------------------~--~--------~~~~~vl 192 (1242)
|.. +..=-+|.||.=+-|.+. + . ...-.|.
T Consensus 490 lGw~~~~~~~~~~~~~~~~~~~~P~v~~~WDEATC~QlVyLYnE~~~~fgG~~~~FF~~~~rp~~~~~~~~~~~~slriA 569 (1002)
T PF07520_consen 490 LGWHPWDDDFDTNKDREKSWVPLPEVQMEWDEATCGQLVYLYNEIQVKFGGRAEEFFALMARPDRQPAPGEDPGPSLRIA 569 (1002)
T ss_pred cCCCCCCCCcccccccccccCCCCceeEEeecceeeeeeehhHHHHHHcCCCHHHHHHHhcCCCccccccCCCCCceEEE
Confidence 431 111135666655444221 1 0 1234688
Q ss_pred EEEeCCcceeeeEEEEEeecCCc-eEEEE---EecCCCCcchHHHHHHHHHHH-HHHHHH----------------hcCC
Q psy5911 193 VYDLGGGTFDISVIEIANVDGET-QFEVL---STNGDTFLGGEDFDMRIINHL-IYEFKI----------------ENGV 251 (1242)
Q Consensus 193 V~D~GggT~Dvsv~~~~~~~~~~-~~~v~---~~~~~~~lGG~~iD~~l~~~l-~~~~~~----------------~~~~ 251 (1242)
-+|+||||||+.|-.+.-..+.+ ...+. --.-+-.+.|+||=..+++.+ ...+.. -+|.
T Consensus 570 SIDIGGGTTDL~It~Y~ld~G~g~nv~I~P~q~FReGFkvAGDDiLldVI~~~VlPal~~aL~~aG~~~~~~ll~~LfG~ 649 (1002)
T PF07520_consen 570 SIDIGGGTTDLMITQYRLDDGQGSNVKITPEQLFREGFKVAGDDILLDVIQRIVLPALQQALKKAGVADPRALLSRLFGG 649 (1002)
T ss_pred EEecCCCcceeeEEEEEeccCCcceeEECcchhhhhhcccccHHHHHHHHHHHhHHHHHHHHHHhcccCHHHHHHHHhCC
Confidence 89999999999998876322212 11111 112234568888877666544 322221 1121
Q ss_pred CCCCCH-H-------------HHHHHHHHHHHHhH-------------Hhc-CCceeeeeccccc-------cCC--CCC
Q psy5911 252 DLSGDS-L-------------AMQRLKEAAEKAKI-------------ELS-NAEQTDINLPYIT-------ADK--NGP 294 (1242)
Q Consensus 252 ~~~~~~-~-------------~~~~L~~~~e~~K~-------------~Ls-~~~~~~i~i~~~~-------~~~--~~~ 294 (1242)
+-.... + ...+++.++|+.=. -|. ...+..+ +.++. .+. -.-
T Consensus 650 dg~~~~~~~lRqQ~~lQv~~Pi~l~iL~~yE~~d~~~~~~~~~~~f~ell~~~~Pt~~v-l~yi~~~~~~~~~~~~~Fdi 728 (1002)
T PF07520_consen 650 DGQSDQDRVLRQQFTLQVFIPIGLAILKAYENYDPLDPSAEIDATFGELLEREPPTAAV-LDYINEEVRRLPAGAPDFDI 728 (1002)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccHHHhcCCcCCcHHH-HHHHHHHHhhcCCCCCCcce
Confidence 200000 0 01234455554321 011 0000000 00000 000 111
Q ss_pred eeeEEEEcHHHHHHHHH---HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccc--------
Q psy5911 295 KHLNVKITRSKLESLVE---DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVK-------- 363 (1242)
Q Consensus 295 ~~~~~~itr~~fe~l~~---~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~-------- 363 (1242)
.++.+.|+..++...+. -.+.+++..+-+++...+ .|.++|+|--||+|.||.++++....++.
T Consensus 729 ldv~l~i~~~~l~~~~~~~r~~i~~~L~~LcEvv~~Y~-----CDVLLLTGRPSrlPgvqalfr~~~pvPp~RIv~l~~Y 803 (1002)
T PF07520_consen 729 LDVPLEIDLEKLHAAFLSDRMVICKTLRALCEVVHHYD-----CDVLLLTGRPSRLPGVQALFRHLLPVPPDRIVPLHGY 803 (1002)
T ss_pred ecceEEEcHHHHHHHHHhCcccHHHHHHHHHHHHHHhC-----CCEEEEcCCccccHHHHHHHHHhCCCCcccEEecCCe
Confidence 34568899999998775 566666666666766544 67899999999999999999998854432
Q ss_pred ------------cCCCcchhhHhHHHHhhhhhcCCccce
Q psy5911 364 ------------KDINPDEAVAVGASVQAGVLSGVVKDV 390 (1242)
Q Consensus 364 ------------~~~~p~~ava~GAa~~a~~l~~~~~~~ 390 (1242)
.-.||.+.||.||.+++.......+++
T Consensus 804 ~tg~WYPF~~~~rI~dPKTTaaVGAmLc~La~~lrL~nF 842 (1002)
T PF07520_consen 804 RTGNWYPFNDQGRIDDPKTTAAVGAMLCLLAEGLRLPNF 842 (1002)
T ss_pred eecccccCCCCCcCCCchHHHHHHHHHHHHhccCCCCCc
Confidence 235999999999988765444234444
No 128
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=98.44 E-value=8.6e-06 Score=100.38 Aligned_cols=337 Identities=19% Similarity=0.237 Sum_probs=192.0
Q ss_pred EEcHHHHHHhh----hCCcchhhHHHHhcCCCCC--------ChhH--Hh--hcccCceEEEEcCCCCeEEEE-c--C--
Q psy5911 690 IVGLPAKRQAI----TNPNNTLYAIKRLIGRKYT--------DEIV--QK--DIKMVPYKIVAADNGDAWVEV-K--D-- 748 (1242)
Q Consensus 690 ~~G~~A~~~~~----~~p~~~~~~~krllg~~~~--------d~~~--~~--~~~~~~~~~~~~~~~~~~~~~-~--~-- 748 (1242)
-||.+|...+. +.....+.+.||+|+.... .... +. .....|+....++.|.+.+.+ . .
T Consensus 331 RVG~EA~RLa~~r~GtEg~TGlSSPKRYLWDe~~~~q~WRFn~~~~~~~~eP~ata~p~~~liN~~G~~L~~l~~~~~r~ 410 (1002)
T PF07520_consen 331 RVGPEAARLASQRRGTEGSTGLSSPKRYLWDERPYEQGWRFNSAYVKSQNEPLATAAPFTNLINDDGQPLYQLDPEDERL 410 (1002)
T ss_pred eecHHHHHHHHHhcCCccccCCCCchhhccCCCccCCCcccCCCCCCCccCchhhhHHHHHhhcccCcchhhhcCccccC
Confidence 47888875432 3455567789999985421 1110 00 112223333345666666655 1 1
Q ss_pred ----eeeChHHHHHHHHHHHHHHHHhHhCCC--------------CCcEEEEecCCCCHHHHHHHHHHHHHc--------
Q psy5911 749 ----QYCAPPQISAEILKKMKSTAETFLNEK--------------IEKAVITVPAYFNDSQRQATKDAGKIA-------- 802 (1242)
Q Consensus 749 ----~~~~~~~v~a~~L~~l~~~a~~~~~~~--------------~~~~VitVPa~~~~~qr~~~~~Aa~~A-------- 802 (1242)
-.|+-.-+..++|..|..+|.-+++.+ ..++++|||......+|+.++++++.|
T Consensus 411 pvf~p~ySRSSLMtfML~EiL~QAL~QINSpa~R~r~~~~~~PR~LR~IILT~P~AMPk~Er~ifr~r~~~Ai~LvWk~l 490 (1002)
T PF07520_consen 411 PVFSPHYSRSSLMTFMLSEILAQALMQINSPAQRLRRGHSDAPRRLRRIILTLPPAMPKPEREIFRRRMEEAIGLVWKAL 490 (1002)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccCCCChhhhheeEECCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 245556778888888877776555432 457999999999999999999888765
Q ss_pred CCc---------------------eeeeechhHHHHHHccCC------------------C-C---------CCCcEEEE
Q psy5911 803 GLE---------------------VLRIINEPTAAALAYGLD------------------K-K---------PDDRIIVV 833 (1242)
Q Consensus 803 Gl~---------------------~~~li~Ep~AAal~y~~~------------------~-~---------~~~~~vlV 833 (1242)
|.. +..=-+|.||.=+-|.+. + . .+.-.|.-
T Consensus 491 Gw~~~~~~~~~~~~~~~~~~~~P~v~~~WDEATC~QlVyLYnE~~~~fgG~~~~FF~~~~rp~~~~~~~~~~~~slriAS 570 (1002)
T PF07520_consen 491 GWHPWDDDFDTNKDREKSWVPLPEVQMEWDEATCGQLVYLYNEIQVKFGGRAEEFFALMARPDRQPAPGEDPGPSLRIAS 570 (1002)
T ss_pred CCCCCCCCcccccccccccCCCCceeEEeecceeeeeeehhHHHHHHcCCCHHHHHHHhcCCCccccccCCCCCceEEEE
Confidence 431 111125666654433221 0 0 11235888
Q ss_pred EeeCCCceEEEEEEEeecCCCc-eEEEEE---ecCCCCCCchHHHHHHHHHH-HHHhhh----------------hcCCC
Q psy5911 834 YDLGGGTFDISVIEIANVDGET-QFEVLS---TNGDTFLGGEDFDMRIINHL-IYEFKI----------------ENGVD 892 (1242)
Q Consensus 834 ~D~GggT~dvsi~~~~~~~~~~-~~~v~~---~~~~~~lGG~~~D~~l~~~l-~~~~~~----------------~~~~~ 892 (1242)
+|+||||||+.|-++.-..+.+ ...+.. -.-+-.+.|+|+=..+++.+ ...+.. -+|.+
T Consensus 571 IDIGGGTTDL~It~Y~ld~G~g~nv~I~P~q~FReGFkvAGDDiLldVI~~~VlPal~~aL~~aG~~~~~~ll~~LfG~d 650 (1002)
T PF07520_consen 571 IDIGGGTTDLMITQYRLDDGQGSNVKITPEQLFREGFKVAGDDILLDVIQRIVLPALQQALKKAGVADPRALLSRLFGGD 650 (1002)
T ss_pred EecCCCcceeeEEEEEeccCCcceeEECcchhhhhhcccccHHHHHHHHHHHhHHHHHHHHHHhcccCHHHHHHHHhCCc
Confidence 9999999999998876322212 222211 11234478988877666554 222221 11212
Q ss_pred CCCCH-H-------------HHHHHHHHHHHhhhhccCCceeeEEec--------------cccc-------cC--CCCe
Q psy5911 893 LSGDS-L-------------AMQRLKEAAEKAKIELSNAEQTDINLP--------------YITA-------DK--NGPK 935 (1242)
Q Consensus 893 ~~~~~-~-------------~~~~L~~~~e~~K~~Ls~~~~~~i~i~--------------~~~~-------~~--~~~~ 935 (1242)
-.... + ...+++.++|..-..-.. ......+. ++.. +. -...
T Consensus 651 g~~~~~~~lRqQ~~lQv~~Pi~l~iL~~yE~~d~~~~~-~~~~~~f~ell~~~~Pt~~vl~yi~~~~~~~~~~~~~Fdil 729 (1002)
T PF07520_consen 651 GQSDQDRVLRQQFTLQVFIPIGLAILKAYENYDPLDPS-AEIDATFGELLEREPPTAAVLDYINEEVRRLPAGAPDFDIL 729 (1002)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-ccccccHHHhcCCcCCcHHHHHHHHHHHhhcCCCCCCccee
Confidence 00000 0 112355555553321000 00011110 1110 00 1123
Q ss_pred eeEEEEcHHHHHHHHH---HHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhccccc---------
Q psy5911 936 HLNVKITRSKLESLVE---DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVK--------- 1003 (1242)
Q Consensus 936 ~~~~~itr~~fe~~~~---~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~--------- 1003 (1242)
+..+.|+..++...+. -.+.+++..+-+++...+ .|-++|+|--||+|.|+.+++.....++.
T Consensus 730 dv~l~i~~~~l~~~~~~~r~~i~~~L~~LcEvv~~Y~-----CDVLLLTGRPSrlPgvqalfr~~~pvPp~RIv~l~~Y~ 804 (1002)
T PF07520_consen 730 DVPLEIDLEKLHAAFLSDRMVICKTLRALCEVVHHYD-----CDVLLLTGRPSRLPGVQALFRHLLPVPPDRIVPLHGYR 804 (1002)
T ss_pred cceEEEcHHHHHHHHHhCcccHHHHHHHHHHHHHHhC-----CCEEEEcCCccccHHHHHHHHHhCCCCcccEEecCCee
Confidence 4568899999998775 666677776777776554 67899999999999999999998855432
Q ss_pred -----------ccCCcchhhhhhHHHhhhhhcccccceEE
Q psy5911 1004 -----------KDINPDEAVAVGASVQAGVLSGVVKDVLL 1032 (1242)
Q Consensus 1004 -----------~~~~p~~aVa~GAa~~a~~l~~~~~~~~~ 1032 (1242)
+--||...||.||.+.+-......+++.+
T Consensus 805 tg~WYPF~~~~rI~dPKTTaaVGAmLc~La~~lrL~nF~f 844 (1002)
T PF07520_consen 805 TGNWYPFNDQGRIDDPKTTAAVGAMLCLLAEGLRLPNFYF 844 (1002)
T ss_pred ecccccCCCCCcCCCchHHHHHHHHHHHHhccCCCCCceE
Confidence 34589999999997765433324445443
No 129
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=98.26 E-value=2.6e-06 Score=97.17 Aligned_cols=85 Identities=19% Similarity=0.256 Sum_probs=56.4
Q ss_pred cEEEEecCCCCHHHHHHHHHHHH--------HcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEE
Q psy5911 138 KAVITVPAYFNDSQRQATKDAGK--------IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIA 209 (1242)
Q Consensus 138 ~~vitVPa~f~~~qr~~~~~Aa~--------~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~ 209 (1242)
-.+||-++..-.+-++.+..+.. .||+++..++. |.|++.+...+ +++..++++|+||||+++++++-.
T Consensus 90 ahIITg~~~~~~Nl~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avLse--Eke~gVa~IDIGgGTT~iaVf~~G 166 (475)
T PRK10719 90 AVIITGETARKENAREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTLSE--ERNTRVLNIDIGGGTANYALFDAG 166 (475)
T ss_pred EEEEEechhHHHHHHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHhhh--hccCceEEEEeCCCceEEEEEECC
Confidence 46778776554444444433211 26777777766 99998887643 567778889999999999999754
Q ss_pred eecCCceEEEEEecCCCCcchHHHH
Q psy5911 210 NVDGETQFEVLSTNGDTFLGGEDFD 234 (1242)
Q Consensus 210 ~~~~~~~~~v~~~~~~~~lGG~~iD 234 (1242)
. + ...+...+||+.+.
T Consensus 167 ~--------l-~~T~~l~vGG~~IT 182 (475)
T PRK10719 167 K--------V-IDTACLNVGGRLIE 182 (475)
T ss_pred E--------E-EEEEEEecccceEE
Confidence 3 2 22233456888765
No 130
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=98.25 E-value=3.1e-06 Score=96.35 Aligned_cols=172 Identities=19% Similarity=0.270 Sum_probs=96.6
Q ss_pred ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEE-EEEecCCCCCCchHHHHHHHHHHHH
Q psy5911 805 EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFE-VLSTNGDTFLGGEDFDMRIINHLIY 883 (1242)
Q Consensus 805 ~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~-v~~~~~~~~lGG~~~D~~l~~~l~~ 883 (1242)
..+.+++||.||.+.+..... +...+||+|+||+|+|++++. +.+. +....+...+|-..+-..+.+.+..
T Consensus 141 ~~V~V~PQ~~~A~~~~~~~~~-~~~~~lVVDIGG~T~Dv~~v~-------~~~~~~~~~~~~~~~Gvs~~~~~I~~~l~~ 212 (318)
T PF06406_consen 141 KDVEVFPQSVGAVFDALMDLD-EDESVLVVDIGGRTTDVAVVR-------GGLPDISKCSGTPEIGVSDLYDAIAQALRS 212 (318)
T ss_dssp EEEEEEESSHHHHHHHHHTS--TTSEEEEEEE-SS-EEEEEEE-------GGG--EEEEEEETTSSTHHHHHHHHHHTT-
T ss_pred eeEEEEcccHHHHHHHHHhhc-ccCcEEEEEcCCCeEEeeeec-------CCccccchhccCCchhHHHHHHHHHHHHHH
Confidence 457889999999998865533 345688999999999999986 2222 2233445567888877777776654
Q ss_pred HhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q psy5911 884 EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEV 963 (1242)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~ 963 (1242)
... .. +.. .++++-..... .. .+..... ..-..+++.++++..++++.+.|.+
T Consensus 213 ~~~-~~------s~~-------~~~~ii~~~~~--~~-----~~~~~i~------~~~~~~~v~~~i~~~~~~l~~~i~~ 265 (318)
T PF06406_consen 213 AGI-DT------SEL-------QIDDIIRNRKD--KG-----YLRQVIN------DEDVIDDVSEVIEEAVEELINRILR 265 (318)
T ss_dssp -SB-HH------HHH-------HHHHHHHTTT---HH-----HHHHHSS------SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcC-CC------cHH-------HHHHHHHhhhc--cc-----eeccccc------chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00 000 11111000000 00 0000000 0001344555555555555555555
Q ss_pred HHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc---ccccccCCcchhhhhhHH
Q psy5911 964 ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE---KEVKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 964 ~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~---~~v~~~~~p~~aVa~GAa 1017 (1242)
.+.+ ..+++.|+||||++. .+.+.|++.|+ ..+...-||..|-|+|-+
T Consensus 266 ~~~~----~~~~~~I~~vGGGA~--ll~~~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 266 ELGD----FSDIDRIFFVGGGAI--LLKDAIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp HHTT----S-S-SEEEEESTTHH--HHHHHHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred HHhh----hccCCeEEEECCcHH--HHHHHHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 5543 246889999999985 57888999986 467788999999999953
No 131
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=98.25 E-value=3.7e-05 Score=89.98 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHH-HhHhCCCCCcEEEEecCCCCHHHHHHHHH-HHHHcCCceeeeechhHHHHHHccCCCCCCCcEEE
Q psy5911 755 QISAEILKKMKSTA-ETFLNEKIEKAVITVPAYFNDSQRQATKD-AGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIV 832 (1242)
Q Consensus 755 ~v~a~~L~~l~~~a-~~~~~~~~~~~VitVPa~~~~~qr~~~~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vl 832 (1242)
+....+++++...- .......-..+++|-|..+...+|..+-+ ..+...++.+.+..++.+++++.+... .+.+
T Consensus 84 ~~~e~~w~~~~~~~~~~~~~~~~~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~~----~~g~ 159 (444)
T COG5277 84 DAMEQIWDYTFFNKGDLLPSPEEHPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSSD----ETGL 159 (444)
T ss_pred HHHHHHHHHhhcchhhccCCCcCCceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCCC----CceE
Confidence 34445555554442 11112223469999999999999988766 557778888888888888888776642 4678
Q ss_pred EEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHh
Q psy5911 833 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEF 885 (1242)
Q Consensus 833 V~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~ 885 (1242)
|+|+|.+.++++-+-=. +.+.....-..+||++++..|.+.|....
T Consensus 160 ViD~G~~~t~v~PV~DG-------~~l~~a~~ri~~gG~~it~~l~~lL~~~~ 205 (444)
T COG5277 160 VIDSGDSVTHVIPVVDG-------IVLPKAVKRIDIGGRDITDYLKKLLREKY 205 (444)
T ss_pred EEEcCCCceeeEeeecc-------ccccccceeeecCcHHHHHHHHHHHhhcc
Confidence 89999999999977522 22333333456899999999999887743
No 132
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=98.18 E-value=4.9e-05 Score=85.98 Aligned_cols=45 Identities=29% Similarity=0.336 Sum_probs=43.1
Q ss_pred eEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 337 EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 337 ~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
.|+++||.++.+.+.+.+++.++.++..+.+|..+.|.|||++|.
T Consensus 358 ~VvftGGva~N~gvv~ale~~Lg~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 358 PVILVGGTSLIEGLVKALGDLLGIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred cEEEECChhhhHHHHHHHHHHhCCcEEECCcccHHHHHHHHHHhc
Confidence 599999999999999999999999999999999999999999984
No 133
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=98.16 E-value=0.00026 Score=77.15 Aligned_cols=46 Identities=22% Similarity=0.298 Sum_probs=42.0
Q ss_pred eEEEecCccChHHHHHHHHHhcccccc-cCCCcchhhHhHHHHhhhh
Q psy5911 337 EIILVGGQTRMPLVQKMVSEFFEKEVK-KDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 337 ~ViLvGG~s~ip~v~~~l~~~f~~~~~-~~~~p~~ava~GAa~~a~~ 382 (1242)
.|+|+||.++.|.+.+.+++.++.++. .+.+|..+.|.|||++|..
T Consensus 242 ~v~~~GGva~N~~l~~al~~~Lg~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 242 GFFITGGIAKNPGVVKRIERILGIKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred CEEEECcccccHHHHHHHHHHhCCCceeCCCCccHHHHHHHHHHHHH
Confidence 589999999999999999999998877 5778999999999999853
No 134
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=98.09 E-value=0.00025 Score=78.03 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhh
Q psy5911 307 ESLVEDLISKSLKPCEV-ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 307 e~l~~~~~~~i~~~i~~-~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
|.++..+...+..-+-. +++...+.. -|+|+||.+....+.+++++.+|.++..+.+|...-|.|||+++..
T Consensus 318 EdI~AGl~~Sv~~~v~~~~~~~~~i~~----~iv~~GGva~n~av~~ale~~lg~~V~vP~~~ql~GAiGAAL~a~~ 390 (396)
T COG1924 318 EDILAGLAYSVAENVAEKVIKRVDIEE----PIVLQGGVALNKAVVRALEDLLGRKVIVPPYAQLMGAIGAALIAKE 390 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCC----CEEEECcchhhHHHHHHHHHHhCCeeecCCccchhhHHHHHHHHhh
Confidence 44455555554443333 555443322 2999999999999999999999999999999999999999999854
No 135
>KOG0676|consensus
Probab=98.01 E-value=8e-05 Score=83.79 Aligned_cols=240 Identities=15% Similarity=0.168 Sum_probs=123.9
Q ss_pred ecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHH-HHcCCCeeeeechHHHHHHHhccCCCCCC
Q psy5911 110 KLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDD 188 (1242)
Q Consensus 110 ~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~ 188 (1242)
.++-.+-...+++|+...-.... .....+++|-|..+...-|+.|.+.. +..+.+-+.+ .-.|..++++.
T Consensus 74 iv~~wd~me~iw~~if~~~L~~~-Pee~pvllte~pl~p~~nREk~tqi~FE~fnvpa~yv--a~qavlya~g~------ 144 (372)
T KOG0676|consen 74 IVTDWDDMEKIWHHLFYSELLVA-PEEHPVLLTEPPLNPKANREKLTQIMFETFNVPALYV--AIQAVLYASGR------ 144 (372)
T ss_pred cccchHHHHHHHHHHHHHhhccC-cccCceEeecCCCCchHhHHHHHHHhhhhcCccHhHH--HHHHHHHHcCC------
Confidence 34445555777777773222211 22357999999999999999887754 3334444333 22332323332
Q ss_pred cEEEEEEeCCcce-eeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q psy5911 189 RIIVVYDLGGGTF-DISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAA 267 (1242)
Q Consensus 189 ~~vlV~D~GggT~-Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 267 (1242)
.+=+|+|+|.|-+ -+-+++ -+.+.+.-....+||+|+...+...|.+ .+....... -++-+
T Consensus 145 ttG~VvD~G~gvt~~vPI~e--------G~~lp~ai~~ldl~G~dlt~~l~~~L~~-----~g~s~~~~~-----~~eIv 206 (372)
T KOG0676|consen 145 TTGLVVDSGDGVTHVVPIYE--------GYALPHAILRLDLAGRDLTDYLLKQLRK-----RGYSFTTSA-----EFEIV 206 (372)
T ss_pred eeEEEEEcCCCceeeeeccc--------ccccchhhheecccchhhHHHHHHHHHh-----ccccccccc-----HHHHH
Confidence 2347889999966 444543 2233334445668999999877666655 222221111 12235
Q ss_pred HHHhHHhcCCc------------eeeeeccccccCCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHH
Q psy5911 268 EKAKIELSNAE------------QTDINLPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALND 327 (1242)
Q Consensus 268 e~~K~~Ls~~~------------~~~i~i~~~~~~~~~~~~~~~~itr~~fe---~l~~~~~-----~~i~~~i~~~l~~ 327 (1242)
+.+|+.++... ...+...+. ..++. .+.+.-+.|. -+++|-+ ..+.+.+-+.+.+
T Consensus 207 ~diKeklCyvald~~~e~~~~~~~~~l~~~y~--lPDg~---~i~i~~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~k 281 (372)
T KOG0676|consen 207 RDIKEKLCYVALDFEEEEETANTSSSLESSYE--LPDGQ---KITIGNERFRCPEVLFQPSLLGMESPGIHELTVNSIMK 281 (372)
T ss_pred HHhHhhhcccccccchhhhccccccccccccc--CCCCC---EEecCCcccccchhcCChhhcCCCCCchhHHHHHHHHh
Confidence 55555554221 111111111 11111 1444444433 2333322 1222333333333
Q ss_pred cC--CCcCCcceEEEecCccChHHHHHHHHHhcc--------cccccCCCcchhhHhHHHHhhh
Q psy5911 328 AK--IDKSKISEIILVGGQTRMPLVQKMVSEFFE--------KEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 328 ~~--~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~--------~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
+. +.+.-...|+|+||++..|.+.+++.+... .++..+.+...+|=.|+++.|.
T Consensus 282 cd~dlrk~L~~nivLsGGtT~~pGl~~Rl~kEl~~l~P~~~~ikv~~pp~r~~s~WlGgSIlas 345 (372)
T KOG0676|consen 282 CDIDLRKDLYENIVLSGGTTMFPGLADRLQKELQALAPSTIKIKVIAPPERKYSAWLGGSILAS 345 (372)
T ss_pred CChhHhHHHHhheEEeCCcccchhHHHHHHHHHhhcCCCCcceEEecCcccccceecCceeEee
Confidence 32 223336779999999999999998877652 1122333333455567666654
No 136
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=98.00 E-value=0.00013 Score=80.03 Aligned_cols=170 Identities=17% Similarity=0.196 Sum_probs=100.2
Q ss_pred eeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhh
Q psy5911 808 RIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKI 887 (1242)
Q Consensus 808 ~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~ 887 (1242)
..++|.+|-+.+...-.. ..+ .|+|+||..+-+..++ . +.+.-.........|+-.|.+.+.+.+-
T Consensus 73 ~~~~ei~~~~~g~~~~~~-~~~--~vidiGgqd~k~i~~~-~-----g~~~~~~~n~~ca~Gtg~f~e~~a~~l~----- 138 (248)
T TIGR00241 73 KIVTEISCHGKGANYLAP-EAR--GVIDIGGQDSKVIKID-D-----GKVDDFTMNDKCAAGTGRFLEVTARRLG----- 138 (248)
T ss_pred CceEEhhHHHHHHHHHCC-CCC--EEEEecCCeeEEEEEC-C-----CcEeeeeecCcccccccHHHHHHHHHcC-----
Confidence 467788776654432221 222 4779999998888886 2 3333233444445577767666665532
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhhhhccC----CceeeEEecc-ccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 888 ENGVDLSGDSLAMQRLKEAAEKAKIELSN----AEQTDINLPY-ITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 888 ~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~----~~~~~i~i~~-~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
++ .++++..+..-.. +....+..+. +... +.-..++ ++++..++..+...+.
T Consensus 139 ---~~-----------~~e~~~~~~~~~~~~~~~~~c~vf~~s~vi~~------l~~g~~~---~di~~~~~~~va~~i~ 195 (248)
T TIGR00241 139 ---VS-----------VEELGSLAEKADRKAKISSMCTVFAESELISL------LAAGVKK---EDILAGVYESIAERVA 195 (248)
T ss_pred ---CC-----------HHHHHHHHhcCCCCCCcCCEeEEEechhHHHH------HHCCCCH---HHHHHHHHHHHHHHHH
Confidence 11 1223333222100 0111111110 0000 0001222 4566666666666666
Q ss_pred HHHHhcCCCccCcc-eEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 963 VALNDAKIDKSKIS-EIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~-~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
+.+...+ ++ .|+|+||.++.|.+.+.+++.++.++..+.+|..+.|+|||++
T Consensus 196 ~~~~~~~-----~~~~Vvl~GGva~n~~l~~~l~~~lg~~v~~~~~~~~~~AlGaAl~ 248 (248)
T TIGR00241 196 EMLQRLK-----IEAPIVFTGGVSKNKGLVKALEKKLGMKVITPPEPQIVGAVGAALL 248 (248)
T ss_pred HHHhhcC-----CCCCEEEECccccCHHHHHHHHHHhCCcEEcCCCccHHHHHHHHhC
Confidence 6665443 44 7999999999999999999999999999999999999999973
No 137
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=97.79 E-value=0.0003 Score=73.70 Aligned_cols=193 Identities=21% Similarity=0.237 Sum_probs=102.2
Q ss_pred HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHH
Q psy5911 159 GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRII 238 (1242)
Q Consensus 159 a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~ 238 (1242)
-+..|.++.--=-|+.+|.+....... .+..+.++|+|||++|.|++.-. +.+.-+.-.| .|+.++..|.
T Consensus 105 ~~~lgv~V~igGvEAemAi~GALTTPG-t~~PlaIlDmG~GSTDAsii~~~-----g~v~~iHlAG----AG~mVTmlI~ 174 (332)
T PF08841_consen 105 EEELGVPVEIGGVEAEMAILGALTTPG-TDKPLAILDMGGGSTDASIINRD-----GEVTAIHLAG----AGNMVTMLIN 174 (332)
T ss_dssp HHHHTSEEEEECEHHHHHHHHHTTSTT---SSEEEEEE-SSEEEEEEE-TT-----S-EEEEEEE-----SHHHHHHHHH
T ss_pred HHHHCCceEEccccHHHHHhcccCCCC-CCCCeEEEecCCCcccHHHhCCC-----CcEEEEEecC----CchhhHHHHH
Confidence 345688888888899999998754433 45668999999999999998633 5666666666 6777766554
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc-----------eeeeeccccccC---------CCCCeeeE
Q psy5911 239 NHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE-----------QTDINLPYITAD---------KNGPKHLN 298 (1242)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------~~~i~i~~~~~~---------~~~~~~~~ 298 (1242)
.. .+++. +.-||.+|+---..- +..+.-..+... .++...+.
T Consensus 175 sE--------LGl~d----------~~lAE~IKkyPlaKVEslfhiR~EDGtv~Ffd~pl~p~~faRvvi~~~~~lvPi~ 236 (332)
T PF08841_consen 175 SE--------LGLED----------RELAEDIKKYPLAKVESLFHIRHEDGTVQFFDEPLDPDVFARVVILKEDGLVPIP 236 (332)
T ss_dssp HH--------CT-S-----------HHHHHHHHHS-EEEEECTTEEEETTS-EEE-SS---CCCTTSEEEECTTEEEEES
T ss_pred Hh--------hCCCC----------HHHHHHhhhcchhhhccceEEEecCCceEEecCCCChHHeeEEEEecCCceeecC
Confidence 32 23211 446788887421110 000000000000 01111122
Q ss_pred EEEcHHHHHHHHHHHHHHH-HHHHHHHHHHcCC--CcCCcceEEEecCccChHHHHHHHHHhc-------c-cccccCCC
Q psy5911 299 VKITRSKLESLVEDLISKS-LKPCEVALNDAKI--DKSKISEIILVGGQTRMPLVQKMVSEFF-------E-KEVKKDIN 367 (1242)
Q Consensus 299 ~~itr~~fe~l~~~~~~~i-~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~ip~v~~~l~~~f-------~-~~~~~~~~ 367 (1242)
..++-+++..+=...=+++ ..-+-++|++... +..+|+.|+|||||+.=.-|-+++.+.+ | -++.-..-
T Consensus 237 ~~~~lEkir~vRr~AK~kVFVtNa~RaL~~vsPtgniR~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNIrG~eG 316 (332)
T PF08841_consen 237 GDLSLEKIRSVRREAKEKVFVTNALRALKQVSPTGNIRDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNIRGVEG 316 (332)
T ss_dssp STS-HHHHHHHHHHHHHHHHHHHHHHHHCCCSTTSSCCC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--GGGTST
T ss_pred CCccHHHHHHHHHHhhhhhhHHHHHHHHHhcCCCCCcccCceEEEecCchhhhhhHHHHHHHHhhCcceeeccccccccC
Confidence 2233344433333222222 2233445554332 2356999999999997555555555554 2 24666778
Q ss_pred cchhhHhHHHHh
Q psy5911 368 PDEAVAVGASVQ 379 (1242)
Q Consensus 368 p~~ava~GAa~~ 379 (1242)
|..|||.|.++.
T Consensus 317 PRNAVATGLvls 328 (332)
T PF08841_consen 317 PRNAVATGLVLS 328 (332)
T ss_dssp TSTHHHHHHHHH
T ss_pred chHHHHHHHHHh
Confidence 999999998774
No 138
>PRK13317 pantothenate kinase; Provisional
Probab=97.79 E-value=0.0023 Score=70.70 Aligned_cols=48 Identities=25% Similarity=0.295 Sum_probs=42.9
Q ss_pred CcceEEEec-CccChHHHHHHHHHhc---ccccccCCCcchhhHhHHHHhhh
Q psy5911 334 KISEIILVG-GQTRMPLVQKMVSEFF---EKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 334 ~i~~ViLvG-G~s~ip~v~~~l~~~f---~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
.++.|+++| |.++.|.+++.+.+.+ +.++..+.+|..+.|.|||+++.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 356899999 7999999999999988 67788899999999999999874
No 139
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=97.70 E-value=0.001 Score=71.95 Aligned_cols=157 Identities=18% Similarity=0.223 Sum_probs=102.9
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHccCC-----CCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCC
Q psy5911 792 RQATKDAGKIAGLEVLRIINEPTAAALAYGLD-----KKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDT 866 (1242)
Q Consensus 792 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~-----~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~ 866 (1242)
-....+|.+.|||+...+=-|.-|.--+|... .....-.++|+|+|+..+.+.++.-.. ..| ....
T Consensus 151 v~~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~~~~a~~~vav~~Igat~s~l~vi~~gk----~ly-----~r~~ 221 (354)
T COG4972 151 VESRIDAFELAGLEPKVLDVESFALLRAYRLLASQFGPEEAAMKVAVFDIGATSSELLVIQDGK----ILY-----TREV 221 (354)
T ss_pred hHHHHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhCCchhhhhheeeeecccceEEEEEECCe----eee-----Eeec
Confidence 34456789999999887777888776666421 111223378999999999999997543 222 2346
Q ss_pred CCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHH
Q psy5911 867 FLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKL 946 (1242)
Q Consensus 867 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~f 946 (1242)
.+||+.+...+.+.+ +.+ ...++.+|....... +--
T Consensus 222 ~~g~~Qlt~~i~r~~--------~L~-----------~~~a~~~k~~~~~P~-------------------------~y~ 257 (354)
T COG4972 222 PVGTDQLTQEIQRAY--------SLT-----------EEKAEEIKRGGTLPT-------------------------DYG 257 (354)
T ss_pred cCcHHHHHHHHHHHh--------CCC-----------hhHhHHHHhCCCCCC-------------------------chh
Confidence 679999988876543 222 235666666543211 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--cCCCccCcceEEEecCcCchHHHHHHHHhhhccc
Q psy5911 947 ESLVEDLISKSLKPCEVALND--AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE 1001 (1242)
Q Consensus 947 e~~~~~~~~~~~~~i~~~l~~--~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~ 1001 (1242)
.++..|++..+.+.|.+.|+- +.-...+|++|+|.||++.+-.+.+.+.+.++.+
T Consensus 258 ~~vl~~f~~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~qrl~~~ 314 (354)
T COG4972 258 SEVLRPFLGELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQRLSIP 314 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHHHhCCC
Confidence 234555555555555555542 1223457999999999999999999999998754
No 140
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=97.65 E-value=0.0055 Score=66.10 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=37.6
Q ss_pred eEEEecCccChHHHHHHHHHhcc-cc----cccCCCcchhhHhHHHHhh
Q psy5911 337 EIILVGGQTRMPLVQKMVSEFFE-KE----VKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 337 ~ViLvGG~s~ip~v~~~l~~~f~-~~----~~~~~~p~~ava~GAa~~a 380 (1242)
.|+|+||.++.+.+.+.|++.++ .+ +..+.+|..+-|+|||++|
T Consensus 214 ~v~~~GGva~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 214 TVLCTGGLALDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred cEEEECcccccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 59999999999999999999884 22 4556788999999999975
No 141
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=97.62 E-value=0.0028 Score=66.76 Aligned_cols=192 Identities=21% Similarity=0.242 Sum_probs=100.7
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+..|.++...=-|+.+|++....... .+.-+.++|+|||++|.|++.-. +.+....-+| .|+-++..+..
T Consensus 106 ~~lgv~V~igGvEAemAi~GALTTPG-t~~PlaIlDmG~GSTDAsii~~~-----g~v~~iHlAG----AG~mVTmlI~s 175 (332)
T PF08841_consen 106 EELGVPVEIGGVEAEMAILGALTTPG-TDKPLAILDMGGGSTDASIINRD-----GEVTAIHLAG----AGNMVTMLINS 175 (332)
T ss_dssp HHHTSEEEEECEHHHHHHHHHTTSTT---SSEEEEEE-SSEEEEEEE-TT-----S-EEEEEEE-----SHHHHHHHHHH
T ss_pred HHHCCceEEccccHHHHHhcccCCCC-CCCCeEEEecCCCcccHHHhCCC-----CcEEEEEecC----CchhhHHHHHH
Confidence 45577777778899999998866544 34457888999999999999744 4555555555 56665555432
Q ss_pred HHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCc-----------eeeEEecccccc---------CCCCeeeEE
Q psy5911 880 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE-----------QTDINLPYITAD---------KNGPKHLNV 939 (1242)
Q Consensus 880 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------~~~i~i~~~~~~---------~~~~~~~~~ 939 (1242)
. .+.+. +.-+|..|+---..- +..+.-..+... .++-..+..
T Consensus 176 E--------LGl~d----------~~lAE~IKkyPlaKVEslfhiR~EDGtv~Ffd~pl~p~~faRvvi~~~~~lvPi~~ 237 (332)
T PF08841_consen 176 E--------LGLED----------RELAEDIKKYPLAKVESLFHIRHEDGTVQFFDEPLDPDVFARVVILKEDGLVPIPG 237 (332)
T ss_dssp H--------CT-S-----------HHHHHHHHHS-EEEEECTTEEEETTS-EEE-SS---CCCTTSEEEECTTEEEEESS
T ss_pred h--------hCCCC----------HHHHHHhhhcchhhhccceEEEecCCceEEecCCCChHHeeEEEEecCCceeecCC
Confidence 2 22211 345677776311000 000000000000 011112222
Q ss_pred EEcHHHHHHHHHHHHHHH-HHHHHHHHHhcCC--CccCcceEEEecCcCchHHHHHHHHhhhc--------ccccccCCc
Q psy5911 940 KITRSKLESLVEDLISKS-LKPCEVALNDAKI--DKSKISEIILVGGQTRMPLVQKMVSEFFE--------KEVKKDINP 1008 (1242)
Q Consensus 940 ~itr~~fe~~~~~~~~~~-~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~ip~v~~~l~~~f~--------~~v~~~~~p 1008 (1242)
.++-+++..+=...-++. ..-..++|++... +..+|+.|+|||||+.=.-|-+++.+.+. -.+.-..-|
T Consensus 238 ~~~lEkir~vRr~AK~kVFVtNa~RaL~~vsPtgniR~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNIrG~eGP 317 (332)
T PF08841_consen 238 DLSLEKIRSVRREAKEKVFVTNALRALKQVSPTGNIRDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNIRGVEGP 317 (332)
T ss_dssp TS-HHHHHHHHHHHHHHHHHHHHHHHHCCCSTTSSCCC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--GGGTSTT
T ss_pred CccHHHHHHHHHHhhhhhhHHHHHHHHHhcCCCCCcccCceEEEecCchhhhhhHHHHHHHHhhCcceeeccccccccCc
Confidence 333444444333322222 2223445554332 23569999999999986666666666652 245667789
Q ss_pred chhhhhhHHHh
Q psy5911 1009 DEAVAVGASVQ 1019 (1242)
Q Consensus 1009 ~~aVa~GAa~~ 1019 (1242)
..|||.|.++.
T Consensus 318 RNAVATGLvls 328 (332)
T PF08841_consen 318 RNAVATGLVLS 328 (332)
T ss_dssp STHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 99999999764
No 142
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=97.54 E-value=0.00037 Score=80.02 Aligned_cols=86 Identities=17% Similarity=0.244 Sum_probs=55.4
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHH--------HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEE
Q psy5911 777 EKAVITVPAYFNDSQRQATKDAGK--------IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEI 848 (1242)
Q Consensus 777 ~~~VitVPa~~~~~qr~~~~~Aa~--------~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~ 848 (1242)
.-.+||.++..-.+-++.+..+.. .||++...++. |.|++.+...+ .++..++++|+||||+++++++-
T Consensus 89 ~ahIITg~~~~~~Nl~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avLse--Eke~gVa~IDIGgGTT~iaVf~~ 165 (475)
T PRK10719 89 GAVIITGETARKENAREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTLSE--ERNTRVLNIDIGGGTANYALFDA 165 (475)
T ss_pred cEEEEEechhHHHHHHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHhhh--hccCceEEEEeCCCceEEEEEEC
Confidence 346788876654444444433221 26777666666 99888877643 45566788899999999999975
Q ss_pred eecCCCceEEEEEecCCCCCCchHHH
Q psy5911 849 ANVDGETQFEVLSTNGDTFLGGEDFD 874 (1242)
Q Consensus 849 ~~~~~~~~~~v~~~~~~~~lGG~~~D 874 (1242)
.. +.+.+...+||+.+.
T Consensus 166 G~---------l~~T~~l~vGG~~IT 182 (475)
T PRK10719 166 GK---------VIDTACLNVGGRLIE 182 (475)
T ss_pred CE---------EEEEEEEecccceEE
Confidence 43 222333556887654
No 143
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=97.36 E-value=0.0053 Score=67.17 Aligned_cols=47 Identities=21% Similarity=0.293 Sum_probs=42.4
Q ss_pred ceEEEecCcCchHHHHHHHHhhhccccc-ccCCcchhhhhhHHHhhhh
Q psy5911 976 SEIILVGGQTRMPLVQKMVSEFFEKEVK-KDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 976 ~~ViLvGG~s~ip~v~~~l~~~f~~~v~-~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+.|+|+||.++.|.+++.+++.++.++. .+.+|..+.|+|||++|..
T Consensus 241 ~~v~~~GGva~N~~l~~al~~~Lg~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 241 EGFFITGGIAKNPGVVKRIERILGIKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred CCEEEECcccccHHHHHHHHHHhCCCceeCCCCccHHHHHHHHHHHHH
Confidence 3589999999999999999999998877 5778999999999999864
No 144
>PRK15027 xylulokinase; Provisional
Probab=97.30 E-value=0.0053 Score=74.82 Aligned_cols=215 Identities=17% Similarity=0.176 Sum_probs=116.3
Q ss_pred HHHHHHHHHcCCc---eeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEe-cCCCC-
Q psy5911 793 QATKDAGKIAGLE---VLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLST-NGDTF- 867 (1242)
Q Consensus 793 ~~~~~Aa~~AGl~---~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~-~~~~~- 867 (1242)
....++++..||. ++.-..+..|++++.+.... + .+++-+|.+.+-..+..-........+..... ..+..
T Consensus 211 ~l~~~~a~~~GL~~~pV~~g~~D~~aa~~g~g~~~~---g-~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (484)
T PRK15027 211 ALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDA---N-QAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWH 286 (484)
T ss_pred cccHHHHHHhCCCCCeEEecccHHHHHHhccCcccC---C-cEEEEecCceEEEEecCCcccCchhceeecceecCCceE
Confidence 3345777888864 44556688888888776432 2 24445666654333222100011111111111 11111
Q ss_pred -CCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccC----C----C-Ceee
Q psy5911 868 -LGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADK----N----G-PKHL 937 (1242)
Q Consensus 868 -lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~----~----~-~~~~ 937 (1242)
.|+....-..++|+.+.+.. .. ...+.+.+.++... ...-+-+|++.-.. + + ...+
T Consensus 287 ~~~~~~~~g~~~~W~~~~~~~-------~~---~~~~~~~a~~~~~g----~~gl~~~P~l~G~r~P~~~~~arg~f~gl 352 (484)
T PRK15027 287 LMSVMLSAASCLDWAAKLTGL-------SN---VPALIAAAQQADES----AEPVWFLPYLSGERTPHNNPQAKGVFFGL 352 (484)
T ss_pred EEEEehhhHHHHHHHHHHhCC-------cc---HHHHHHHHhhCCCC----CCceEEecccccCCCcCCCCCcceEEECC
Confidence 13333333456677666531 01 22333333332211 11123445442110 1 1 1123
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHH
Q psy5911 938 NVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 938 ~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa 1017 (1242)
+...+|.+|-..+-+-+.-....+-+.+++.+. .++.|+++||+++++.+.+++.+.+|.++....+.+++.++|||
T Consensus 353 ~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~w~Qi~Adv~g~pv~~~~~~~~~~a~GaA 429 (484)
T PRK15027 353 THQHGPNELARAVLEGVGYALADGMDVVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAA 429 (484)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CccEEEEeCcccCCHHHHHHHHHHhCCeEEeecCCCcchHHHHH
Confidence 344567777765554444444444455555443 47899999999999999999999999999777777778999999
Q ss_pred Hhhhhhccccc
Q psy5911 1018 VQAGVLSGVVK 1028 (1242)
Q Consensus 1018 ~~a~~l~~~~~ 1028 (1242)
+.|+.-.|..+
T Consensus 430 ~lA~~~~G~~~ 440 (484)
T PRK15027 430 RLAQIAANPEK 440 (484)
T ss_pred HHHHHhcCCcC
Confidence 99987766433
No 145
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=97.24 E-value=0.02 Score=66.82 Aligned_cols=91 Identities=22% Similarity=0.236 Sum_probs=60.5
Q ss_pred eeEEEEcHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhccccc---------
Q psy5911 936 HLNVKITRSKLESLVEDL---ISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVK--------- 1003 (1242)
Q Consensus 936 ~~~~~itr~~fe~~~~~~---~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~--------- 1003 (1242)
++.+.|.-.++++.+-.. +....+.+-+++.. .+.|-++|+|--||.|.|+..++.....++.
T Consensus 742 d~pl~i~~~ql~e~~ls~~~~i~~~f~al~EaIn~-----y~cDVlLlTGRPsrlPgvqalfr~~~pvp~~rilpl~~Yr 816 (1014)
T COG4457 742 DVPLAIDLSQLHECFLSGDYDITGVFDALCEAINH-----YDCDVLLLTGRPSRLPGVQALFRHLQPVPVNRILPLDDYR 816 (1014)
T ss_pred ccceeccHHHHHHHHhhCcccccchHHHHHHHHhh-----hcccEEEEcCCcccCccHHHHHhhcCCCCCCceEecccee
Confidence 344677777777755443 44444444444443 3467899999999999999999877643321
Q ss_pred -----------ccCCcchhhhhhHHHhhhhhcccccceE
Q psy5911 1004 -----------KDINPDEAVAVGASVQAGVLSGVVKDVL 1031 (1242)
Q Consensus 1004 -----------~~~~p~~aVa~GAa~~a~~l~~~~~~~~ 1031 (1242)
+--||...+|.||.+.+..+.-...++.
T Consensus 817 vg~WYPF~k~grIddPKtTAaVGAMLC~Lsl~~rl~nF~ 855 (1014)
T COG4457 817 VGTWYPFRKQGRIDDPKTTAAVGAMLCALSLELRLPNFY 855 (1014)
T ss_pred ccceecccccCcCCCcchHHHHHHHHHHHHhhccCccee
Confidence 2358999999999877655444444443
No 146
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=97.23 E-value=0.033 Score=67.95 Aligned_cols=81 Identities=22% Similarity=0.227 Sum_probs=49.8
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
.-+|.+|-..+-+-+.-.....-+.|.+.. ...++.|.++||+|+.+...+++.+.+|.++..+...+.+.+-||++.
T Consensus 369 ~~~~~~l~ravlEgva~~l~~~~~~l~~~~--g~~~~~i~~~GGgars~~w~Qi~Ad~~g~~v~~~~~~e~~a~g~A~~~ 446 (502)
T COG1070 369 PHTRAHLARAVLEGVAFALADGLEALEELG--GKPPSRVRVVGGGARSPLWLQILADALGLPVVVPEVEEAGALGGAALA 446 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCccEEEEECCcccCHHHHHHHHHHcCCeeEecCcccchHHHHHHHH
Confidence 346666554333222222233334444431 234678999999999999999999999999885555444445445444
Q ss_pred hhh
Q psy5911 380 AGV 382 (1242)
Q Consensus 380 a~~ 382 (1242)
+..
T Consensus 447 ~~~ 449 (502)
T COG1070 447 AAA 449 (502)
T ss_pred HHH
Confidence 433
No 147
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=97.23 E-value=0.019 Score=66.99 Aligned_cols=89 Identities=22% Similarity=0.240 Sum_probs=58.8
Q ss_pred eEEEEcHHHHHHHHHHH---HHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccc----------
Q psy5911 297 LNVKITRSKLESLVEDL---ISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVK---------- 363 (1242)
Q Consensus 297 ~~~~itr~~fe~l~~~~---~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~---------- 363 (1242)
+-+.|.-.++++.+-.- +......+-+++.. .+.|.++|+|--||+|.+|..++.....++.
T Consensus 743 ~pl~i~~~ql~e~~ls~~~~i~~~f~al~EaIn~-----y~cDVlLlTGRPsrlPgvqalfr~~~pvp~~rilpl~~Yrv 817 (1014)
T COG4457 743 VPLAIDLSQLHECFLSGDYDITGVFDALCEAINH-----YDCDVLLLTGRPSRLPGVQALFRHLQPVPVNRILPLDDYRV 817 (1014)
T ss_pred cceeccHHHHHHHHhhCcccccchHHHHHHHHhh-----hcccEEEEcCCcccCccHHHHHhhcCCCCCCceEeccceec
Confidence 34667777777655433 33334444444432 3467899999999999999999877643322
Q ss_pred ----------cCCCcchhhHhHHHHhhhhhcCCccce
Q psy5911 364 ----------KDINPDEAVAVGASVQAGVLSGVVKDV 390 (1242)
Q Consensus 364 ----------~~~~p~~ava~GAa~~a~~l~~~~~~~ 390 (1242)
+-.||...+|.||.+++..+.-...++
T Consensus 818 g~WYPF~k~grIddPKtTAaVGAMLC~Lsl~~rl~nF 854 (1014)
T COG4457 818 GTWYPFRKQGRIDDPKTTAAVGAMLCALSLELRLPNF 854 (1014)
T ss_pred cceecccccCcCCCcchHHHHHHHHHHHHhhccCcce
Confidence 235899999999988876554444443
No 148
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=97.23 E-value=0.0061 Score=67.41 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 946 LESLVEDLISKSLKPCEV-ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 946 fe~~~~~~~~~~~~~i~~-~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
.|+++..+...+..-+-. +++...+.. . |+|+||.+....+.+++.+.+|.++..+.+|...-|+|||++|..
T Consensus 317 ~EdI~AGl~~Sv~~~v~~~~~~~~~i~~--~--iv~~GGva~n~av~~ale~~lg~~V~vP~~~ql~GAiGAAL~a~~ 390 (396)
T COG1924 317 PEDILAGLAYSVAENVAEKVIKRVDIEE--P--IVLQGGVALNKAVVRALEDLLGRKVIVPPYAQLMGAIGAALIAKE 390 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCC--C--EEEECcchhhHHHHHHHHHHhCCeeecCCccchhhHHHHHHHHhh
Confidence 355555665555544444 555444322 2 999999999999999999999999999999999999999999854
No 149
>KOG0797|consensus
Probab=97.02 E-value=0.0068 Score=68.74 Aligned_cols=123 Identities=19% Similarity=0.180 Sum_probs=86.1
Q ss_pred CeeeChHHHHHHHHHHHHHHHHhHhCCCCC-----cEEEEecCCCCHHHHHHHH-HHHHHcCCceeeeechhHHHHHHcc
Q psy5911 748 DQYCAPPQISAEILKKMKSTAETFLNEKIE-----KAVITVPAYFNDSQRQATK-DAGKIAGLEVLRIINEPTAAALAYG 821 (1242)
Q Consensus 748 ~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~-----~~VitVPa~~~~~qr~~~~-~Aa~~AGl~~~~li~Ep~AAal~y~ 821 (1242)
....+..++++.+-+-+.-...+.+..+.+ .+|+-||-.|....-+.+. -.....||....++-|+.||.+..|
T Consensus 194 ~~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESlaatfGaG 273 (618)
T KOG0797|consen 194 PPYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYHAVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESLAATFGAG 273 (618)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhcCCChhHhcceeEEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhhHHHhcCC
Confidence 345566666666544444444555554443 5899999999987755554 4567789999999999999999888
Q ss_pred CCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHH
Q psy5911 822 LDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 883 (1242)
Q Consensus 822 ~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 883 (1242)
+. .-.|+|+|+-+|.++.++-.- ....+.--...||.|+++.|+-++..
T Consensus 274 ls------s~CVVdiGAQkTsIaCVEdGv-------s~~ntri~L~YGGdDitr~f~~ll~r 322 (618)
T KOG0797|consen 274 LS------SACVVDIGAQKTSIACVEDGV-------SLPNTRIILPYGGDDITRCFLWLLRR 322 (618)
T ss_pred cc------ceeEEEccCcceeEEEeecCc-------cccCceEEeccCCchHHHHHHHHHHh
Confidence 75 247779999999999997322 11112222345999999999877654
No 150
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=96.98 E-value=0.011 Score=71.47 Aligned_cols=87 Identities=23% Similarity=0.250 Sum_probs=63.1
Q ss_pred eEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhH
Q psy5911 937 LNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGA 1016 (1242)
Q Consensus 937 ~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GA 1016 (1242)
++..-+|.+|-..+-+-+.-....+-+.+++.+. ..++.|.++||++++|.+.+++.+.||.++....++ ++.++||
T Consensus 358 l~~~~~~~~l~rAvlEgia~~~r~~~e~l~~~~~--~~~~~i~~~GGga~s~~w~Qi~Adv~g~pV~~~~~~-e~~~lGa 434 (465)
T TIGR02628 358 LTLNTTRGHIYRAALEGLTAQLKRNLQMLEQIGQ--FKASELLLVGGGSKNTLWNQIRANMLDIPVKVVDDA-ETTVAGA 434 (465)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCcceEEEecCccCCHHHHHHhhhhcCCeeEeccCC-cchHHHH
Confidence 3445567776665555444444444455555431 247889999999999999999999999999766554 6889999
Q ss_pred HHhhhhhccc
Q psy5911 1017 SVQAGVLSGV 1026 (1242)
Q Consensus 1017 a~~a~~l~~~ 1026 (1242)
|+.|+.-.|.
T Consensus 435 A~~a~~a~G~ 444 (465)
T TIGR02628 435 AMFGFYGVGE 444 (465)
T ss_pred HHHHHHhcCc
Confidence 9999876653
No 151
>KOG0676|consensus
Probab=96.97 E-value=0.004 Score=70.39 Aligned_cols=232 Identities=16% Similarity=0.194 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEee
Q psy5911 758 AEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDL 836 (1242)
Q Consensus 758 a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~ 836 (1242)
..+..|+...-.... .....+++|-|..+....|+.|.+.. +.-+.+-+.+ .-.|..++++.. +=+|+|+
T Consensus 82 e~iw~~if~~~L~~~-Pee~pvllte~pl~p~~nREk~tqi~FE~fnvpa~yv--a~qavlya~g~t------tG~VvD~ 152 (372)
T KOG0676|consen 82 EKIWHHLFYSELLVA-PEEHPVLLTEPPLNPKANREKLTQIMFETFNVPALYV--AIQAVLYASGRT------TGLVVDS 152 (372)
T ss_pred HHHHHHHHHHhhccC-cccCceEeecCCCCchHhHHHHHHHhhhhcCccHhHH--HHHHHHHHcCCe------eEEEEEc
Confidence 666666662222211 22357999999999999999988764 3334443333 222323233332 3478899
Q ss_pred CCCce-EEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhcc
Q psy5911 837 GGGTF-DISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELS 915 (1242)
Q Consensus 837 GggT~-dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 915 (1242)
|.|-+ -+.+++ .+.+...-....+||+|+...+...|.+ .+........ +.-++.+|+.++
T Consensus 153 G~gvt~~vPI~e--------G~~lp~ai~~ldl~G~dlt~~l~~~L~~-----~g~s~~~~~~-----~eIv~diKeklC 214 (372)
T KOG0676|consen 153 GDGVTHVVPIYE--------GYALPHAILRLDLAGRDLTDYLLKQLRK-----RGYSFTTSAE-----FEIVRDIKEKLC 214 (372)
T ss_pred CCCceeeeeccc--------ccccchhhheecccchhhHHHHHHHHHh-----cccccccccH-----HHHHHHhHhhhc
Confidence 99966 455553 2333444455678999999977777665 1211111110 112333444332
Q ss_pred CC------------ceeeEEeccccccCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHhcC--CCcc
Q psy5911 916 NA------------EQTDINLPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALNDAK--IDKS 973 (1242)
Q Consensus 916 ~~------------~~~~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~~-----~~~~~~i~~~l~~~~--~~~~ 973 (1242)
.. ....+...+. ..|+.. +.+.-+.|. -+++|-+ ..+-+.+-..+.++. +.+.
T Consensus 215 yvald~~~e~~~~~~~~~l~~~y~--lPDg~~---i~i~~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~kcd~dlrk~ 289 (372)
T KOG0676|consen 215 YVALDFEEEEETANTSSSLESSYE--LPDGQK---ITIGNERFRCPEVLFQPSLLGMESPGIHELTVNSIMKCDIDLRKD 289 (372)
T ss_pred ccccccchhhhccccccccccccc--CCCCCE---EecCCcccccchhcCChhhcCCCCCchhHHHHHHHHhCChhHhHH
Confidence 11 0111111111 112211 344433332 1233222 122233333333332 2233
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
-...|+|+||++..|.+.+++.+.... ++..+.+...++=.|+++.|.
T Consensus 290 L~~nivLsGGtT~~pGl~~Rl~kEl~~l~P~~~~ikv~~pp~r~~s~WlGgSIlas 345 (372)
T KOG0676|consen 290 LYENIVLSGGTTMFPGLADRLQKELQALAPSTIKIKVIAPPERKYSAWLGGSILAS 345 (372)
T ss_pred HHhheEEeCCcccchhHHHHHHHHHhhcCCCCcceEEecCcccccceecCceeEee
Confidence 367899999999999999988776621 233343444556677777664
No 152
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=96.97 E-value=0.005 Score=70.05 Aligned_cols=46 Identities=28% Similarity=0.330 Sum_probs=43.4
Q ss_pred ceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhh
Q psy5911 976 SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 976 ~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+.|+++||.++.+.+.+.+++.++.++..+.+|..+.|.|||++|.
T Consensus 357 ~~VvftGGva~N~gvv~ale~~Lg~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 357 EPVILVGGTSLIEGLVKALGDLLGIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred CcEEEECChhhhHHHHHHHHHHhCCcEEECCcccHHHHHHHHHHhc
Confidence 3499999999999999999999999999999999999999999984
No 153
>KOG0677|consensus
Probab=96.91 E-value=0.011 Score=61.03 Aligned_cols=223 Identities=19% Similarity=0.219 Sum_probs=131.1
Q ss_pred CCcEEEEecCCCCHHHHHHHHHH-HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCC
Q psy5911 136 IEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGE 214 (1242)
Q Consensus 136 ~~~~vitVPa~f~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~ 214 (1242)
-.++.+|-|.--....|+.|.+. .+.-||.-+.+.-...-+.++-++... +|+|-|.|-+-+.-+.-+
T Consensus 101 ~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~tG------vVvDSGDGVTHi~PVye~----- 169 (389)
T KOG0677|consen 101 NCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLLTG------VVVDSGDGVTHIVPVYEG----- 169 (389)
T ss_pred cCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhcccce------EEEecCCCeeEEeeeecc-----
Confidence 44789999999888889988776 467788777665544444444443222 677999998877654311
Q ss_pred ceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc-----------eeeee
Q psy5911 215 TQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE-----------QTDIN 283 (1242)
Q Consensus 215 ~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------~~~i~ 283 (1242)
+..-.-.+-..+.|+|+++-|.++|..+ .+..+-+.+ .+..+..|+.|+.-. ++.+-
T Consensus 170 --~~l~HLtrRldvAGRdiTryLi~LLl~r---GYafN~tAD-------FETVR~iKEKLCYisYd~e~e~kLalETTvL 237 (389)
T KOG0677|consen 170 --FVLPHLTRRLDVAGRDITRYLIKLLLRR---GYAFNHTAD-------FETVREIKEKLCYISYDLELEQKLALETTVL 237 (389)
T ss_pred --eehhhhhhhccccchhHHHHHHHHHHhh---ccccccccc-------hHHHHHHHhhheeEeechhhhhHhhhhheee
Confidence 1111122234569999999999888654 122211122 234455566554210 11111
Q ss_pred ccccccCCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCCCcCC--cceEEEecCccChHHHHHH
Q psy5911 284 LPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALNDAKIDKSK--ISEIILVGGQTRMPLVQKM 353 (1242)
Q Consensus 284 i~~~~~~~~~~~~~~~~itr~~fe---~l~~~~~-----~~i~~~i~~~l~~~~~~~~~--i~~ViLvGG~s~ip~v~~~ 353 (1242)
++...-. ..-.+.+--+.|| .+++|.+ ..+.+++-.+++.+.++... -.+|+|.|||+.-|.+-..
T Consensus 238 v~~YtLP----DGRvIkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVLSGGstMYPGLPSR 313 (389)
T KOG0677|consen 238 VESYTLP----DGRVIKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVLSGGSTMYPGLPSR 313 (389)
T ss_pred eeeeecC----CCcEEEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeeecCCcccCCCCcHH
Confidence 1111110 1123566666665 3666644 24566777777777654322 4689999999999988877
Q ss_pred HHHhc----------cc-------c--cccCCCcchhhHhHHHHhhhhhcC
Q psy5911 354 VSEFF----------EK-------E--VKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 354 l~~~f----------~~-------~--~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
|++.+ |. + +-.++.-..-|-.|.|..|.++..
T Consensus 314 LEkElkqlyl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD 364 (389)
T KOG0677|consen 314 LEKELKQLYLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKD 364 (389)
T ss_pred HHHHHHHHHHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcC
Confidence 76543 11 1 122333456788888888877664
No 154
>PRK00047 glpK glycerol kinase; Provisional
Probab=96.78 E-value=0.035 Score=68.01 Aligned_cols=203 Identities=17% Similarity=0.158 Sum_probs=105.2
Q ss_pred cCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEE-EEeecCCCceEEEEEec-CC----CCCCchHHHH
Q psy5911 802 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVI-EIANVDGETQFEVLSTN-GD----TFLGGEDFDM 875 (1242)
Q Consensus 802 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~-~~~~~~~~~~~~v~~~~-~~----~~lGG~~~D~ 875 (1242)
+|.+++.-..+-.|++++.+.... +..+++ +|.+++-.... .-...+..+.+...... .+ ...|+...--
T Consensus 236 ~g~pV~~g~~D~~aa~~G~G~~~~--g~~~~~--~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g 311 (498)
T PRK00047 236 GEVPIAGIAGDQQAALFGQLCFEP--GMAKNT--YGTGCFMLMNTGEKAVKSENGLLTTIAWGIDGKVVYALEGSIFVAG 311 (498)
T ss_pred CCceEEEEccHHHHHHHhCcCCCC--CceEEe--eccceEEEEecCCccccCCCCceeEEEEEcCCCcEEEEEeeHhhHH
Confidence 577787777888888888876432 222222 45443322221 00011111111111111 11 1234555555
Q ss_pred HHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEecccccc----CCC-----CeeeEEEEcHHHH
Q psy5911 876 RIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITAD----KNG-----PKHLNVKITRSKL 946 (1242)
Q Consensus 876 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~-----~~~~~~~itr~~f 946 (1242)
..++|+.+.|... ... ..+...++.. ... ..-+.+|++.-. .+. ...++..-+|.++
T Consensus 312 ~~l~W~~~~~~~~------~~~---~~~~~~a~~~----~~~-~gl~~lP~l~G~r~P~~d~~arg~~~Gl~~~~~~~~l 377 (498)
T PRK00047 312 SAIQWLRDGLKII------SDA---SDSEALARKV----EDN-DGVYVVPAFTGLGAPYWDSDARGAIFGLTRGTTKEHI 377 (498)
T ss_pred HHHHHHHHHhcCC------CCH---HHHHHHHhcC----CCC-CCEEEeCccccCCCCCCCCCCcEEEECCCCCCCHHHH
Confidence 6778888877411 111 1121222221 111 123556665411 010 1112333456655
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 947 ESLVEDLISKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 947 e~~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
-..+-+-+.--...+-+.+++ .+. .++.|.++||.+++|.+.+++.+.||.++.... ..++.|+|||+.|+.-.|
T Consensus 378 ~rAvlEgia~~~r~~~e~l~~~~g~---~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~-~~e~~a~GaA~~A~~~~G 453 (498)
T PRK00047 378 IRATLESIAYQTRDVLDAMQADSGI---RLKELRVDGGAVANNFLMQFQADILGVPVERPV-VAETTALGAAYLAGLAVG 453 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC---CCceEEEecCcccCHHHHHHHHHhhCCeeEecC-cccchHHHHHHHHhhhcC
Confidence 543333222222222234442 243 478899999999999999999999999997544 456889999999987666
Q ss_pred c
Q psy5911 1026 V 1026 (1242)
Q Consensus 1026 ~ 1026 (1242)
.
T Consensus 454 ~ 454 (498)
T PRK00047 454 F 454 (498)
T ss_pred c
Confidence 4
No 155
>KOG0797|consensus
Probab=96.78 E-value=0.011 Score=67.25 Aligned_cols=122 Identities=18% Similarity=0.172 Sum_probs=85.4
Q ss_pred eecChHHHHHHHHHHHHHHHHhHhcCCCC-----cEEEEecCCCCHHHHHHH-HHHHHHcCCCeeeeechHHHHHHHhcc
Q psy5911 109 KKLAPPQISAEILKKMKSTAETFLNEKIE-----KAVITVPAYFNDSQRQAT-KDAGKIAGLEVLRIINEPTAAALAYGL 182 (1242)
Q Consensus 109 ~~~~~~~v~a~~L~~l~~~a~~~~~~~~~-----~~vitVPa~f~~~qr~~~-~~Aa~~AGl~~~~li~Ep~AAal~y~~ 182 (1242)
...+..++++++-+-+.-.....+..+.+ ++|+-||-.|.....+.+ .-.....||....++-|+.||.+..|+
T Consensus 195 ~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESlaatfGaGl 274 (618)
T KOG0797|consen 195 PYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYHAVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESLAATFGAGL 274 (618)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhcCCChhHhcceeEEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhhHHHhcCCc
Confidence 34566666666554444444555554433 589999999997775554 445678899999999999999988877
Q ss_pred CCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHH
Q psy5911 183 DKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 243 (1242)
Q Consensus 183 ~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~ 243 (1242)
.. -+|+|+|+-++.++.++-+-.-+...+. ...||.||++.|+-++..
T Consensus 275 ss------~CVVdiGAQkTsIaCVEdGvs~~ntri~-------L~YGGdDitr~f~~ll~r 322 (618)
T KOG0797|consen 275 SS------ACVVDIGAQKTSIACVEDGVSLPNTRII-------LPYGGDDITRCFLWLLRR 322 (618)
T ss_pred cc------eeEEEccCcceeEEEeecCccccCceEE-------eccCCchHHHHHHHHHHh
Confidence 42 3777999999999988743211212222 245999999999877654
No 156
>PRK10331 L-fuculokinase; Provisional
Probab=96.73 E-value=0.032 Score=67.78 Aligned_cols=210 Identities=19% Similarity=0.148 Sum_probs=110.6
Q ss_pred HHHHHHHcCC----ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCC------ceEEEEEe-c
Q psy5911 795 TKDAGKIAGL----EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGE------TQFEVLST-N 863 (1242)
Q Consensus 795 ~~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~------~~~~v~~~-~ 863 (1242)
..+++...|| +++.-..+..||+++.+.. .+. +++-+|.+.+ -.+........ +....... .
T Consensus 219 ~~~~a~~~GL~~g~pV~~g~~D~~aa~~g~g~~---~g~--~~~~~GT~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
T PRK10331 219 QPSAAALLGLPVGIPVISAGHDTQFALFGSGAG---QNQ--PVLSSGTWEI--LMVRSAQVDTSLLSQYAGSTCELDSQS 291 (470)
T ss_pred CHHHHHHhCCCCCCeEEEccccHHHHHhCCCCC---CCC--EEEecchhhh--heeecCCCcccccccccccceeccccC
Confidence 3466666666 4666678888888888752 233 2324554433 22211110000 10101111 1
Q ss_pred CCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCC-CeeeEEEEc
Q psy5911 864 GDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNG-PKHLNVKIT 942 (1242)
Q Consensus 864 ~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~-~~~~~~~it 942 (1242)
+.-..|+..+....++|+.+.|.. ....+..|.+.++++... ....+-+|.+.....+ ...++..-+
T Consensus 292 ~~~~~~~~~~~g~~~~W~~~~~~~--------~~~~y~~l~~~a~~~~~g----~~gl~~~p~~~g~~rg~~~Gl~~~~~ 359 (470)
T PRK10331 292 GLYNPGMQWLASGVLEWVRKLFWT--------AETPYQTMIEEARAIPPG----ADGVKMQCDLLACQNAGWQGVTLNTT 359 (470)
T ss_pred ceeeechhhHHHHHHHHHHHHhcc--------cCchHHHHHHHHhcCCCC----CCceEecccccccCceeEECCCCCcC
Confidence 111123333444467888877641 012234444444433211 1112234444321111 122334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 943 RSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 943 r~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
|.++-..+-+-+.-....+-+.+++.+ ...++.|.++||++++|.+.+++.+.+|.++.... ..++.++|||+.|+.
T Consensus 360 ~~~l~rAvlEgia~~~~~~~~~l~~~~--~~~~~~i~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~a~GaA~la~~ 436 (470)
T PRK10331 360 RGHFYRAALEGLTAQLKRNLQVLEKIG--HFKASELLLVGGGSRNALWNQIKANMLDIPIKVLD-DAETTVAGAAMFGWY 436 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCceEEEEcccccCHHHHHHHHHhcCCeeEecC-cccchHHHHHHHHHH
Confidence 777665444433333333333444432 12478999999999999999999999999997555 456889999999987
Q ss_pred hccc
Q psy5911 1023 LSGV 1026 (1242)
Q Consensus 1023 l~~~ 1026 (1242)
-.|.
T Consensus 437 ~~G~ 440 (470)
T PRK10331 437 GVGE 440 (470)
T ss_pred hcCC
Confidence 6653
No 157
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=96.62 E-value=0.025 Score=63.70 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc-----ccccccCCcchhhhhhHHHhh
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-----KEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-----~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+..+...+..-+...+.+.+ .--+.|+|+||.++.+.+.+.|++.++ .++..+.+|..+.|+|||++|
T Consensus 360 aAGL~~SIA~Rv~s~l~r~~---~i~~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 360 LAGLHRAIILRAISIISRSG---GITDQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred HHHHHHHHHHHHHHHHhccc---CCCCCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 33444444444444444331 112469999999999999999999994 568889999999999999975
No 158
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=96.61 E-value=0.014 Score=65.61 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=40.7
Q ss_pred ceEEEecCccChHHHHHHHHHhcc-----cccccCCCcchhhHhHHHHhh
Q psy5911 336 SEIILVGGQTRMPLVQKMVSEFFE-----KEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 336 ~~ViLvGG~s~ip~v~~~l~~~f~-----~~~~~~~~p~~ava~GAa~~a 380 (1242)
..|+|+||.++.+.+.+.|++.++ .++..+.+|..+.|+|||++|
T Consensus 383 ~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 383 DQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred CCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 469999999999999999999993 667889999999999999975
No 159
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=96.51 E-value=0.055 Score=66.16 Aligned_cols=52 Identities=29% Similarity=0.448 Sum_probs=45.5
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhccc
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 1026 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~ 1026 (1242)
.++.|.++||.++++.+.+++.+.||.++.... ..++.++|||+.|+...+.
T Consensus 390 ~~~~i~~~GG~s~s~~~~Q~~Adv~g~pv~~~~-~~e~~a~GaA~~a~~~~g~ 441 (481)
T TIGR01312 390 PIQSIRLIGGGAKSPAWRQMLADIFGTPVDVPE-GEEGPALGAAILAAWALGE 441 (481)
T ss_pred CcceEEEeccccCCHHHHHHHHHHhCCceeecC-CCcchHHHHHHHHHHhcCC
Confidence 478999999999999999999999999987554 6678899999999876653
No 160
>PRK15027 xylulokinase; Provisional
Probab=96.49 E-value=0.05 Score=66.32 Aligned_cols=83 Identities=17% Similarity=0.206 Sum_probs=59.1
Q ss_pred EEcHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHH
Q psy5911 300 KITRSKLESL-VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 300 ~itr~~fe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 378 (1242)
.-+|.+|-.. ++.+.-.+...+ +.+++.+. .++.|+++||+++++.+.+++.+.+|.++....+.+++.|+|||+
T Consensus 355 ~~~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~w~Qi~Adv~g~pv~~~~~~~~~~a~GaA~ 430 (484)
T PRK15027 355 QHGPNELARAVLEGVGYALADGM-DVVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAAR 430 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CccEEEEeCcccCCHHHHHHHHHHhCCeEEeecCCCcchHHHHHH
Confidence 3356665442 233333333333 33444442 478999999999999999999999999997777777789999999
Q ss_pred hhhhhcCC
Q psy5911 379 QAGVLSGV 386 (1242)
Q Consensus 379 ~a~~l~~~ 386 (1242)
.|+.-.|.
T Consensus 431 lA~~~~G~ 438 (484)
T PRK15027 431 LAQIAANP 438 (484)
T ss_pred HHHHhcCC
Confidence 99876654
No 161
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=96.42 E-value=0.0048 Score=65.43 Aligned_cols=48 Identities=29% Similarity=0.471 Sum_probs=43.5
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
.++.|+++||.++.|.+.+++.+.|+.++..... .++.|.|||+.|+.
T Consensus 149 ~~~~i~~~GG~~~n~~~~q~~Advl~~~V~~~~~-~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 149 PIRRIRVSGGGAKNPLWMQILADVLGRPVVRPEV-EEASALGAALLAAV 196 (198)
T ss_dssp CESEEEEESGGGGSHHHHHHHHHHHTSEEEEESS-STHHHHHHHHHHHH
T ss_pred cceeeEeccccccChHHHHHHHHHhCCceEeCCC-CchHHHHHHHHHHh
Confidence 4899999999999999999999999998876555 89999999999874
No 162
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=96.39 E-value=0.016 Score=62.52 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=37.8
Q ss_pred eEEEecCcCchHHHHHHHHhhhc-cc----ccccCCcchhhhhhHHHhh
Q psy5911 977 EIILVGGQTRMPLVQKMVSEFFE-KE----VKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 977 ~ViLvGG~s~ip~v~~~l~~~f~-~~----v~~~~~p~~aVa~GAa~~a 1020 (1242)
.|+|+||.++.+.+.+.+++.++ .+ +..+.+|+.+-|+|||++|
T Consensus 214 ~v~~~GGva~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 214 TVLCTGGLALDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred cEEEECcccccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 59999999999999999999884 22 5556789999999999975
No 163
>KOG0677|consensus
Probab=96.36 E-value=0.014 Score=60.32 Aligned_cols=223 Identities=19% Similarity=0.215 Sum_probs=131.5
Q ss_pred CCcEEEEecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCC
Q psy5911 776 IEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGE 854 (1242)
Q Consensus 776 ~~~~VitVPa~~~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~ 854 (1242)
-.++.+|-|.--....|+.|-+. .+.-||.-+.+.-...-+.++-|+... +|+|-|-|-+-+.-+.-.
T Consensus 101 ~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~tG------vVvDSGDGVTHi~PVye~----- 169 (389)
T KOG0677|consen 101 NCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLLTG------VVVDSGDGVTHIVPVYEG----- 169 (389)
T ss_pred cCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhcccce------EEEecCCCeeEEeeeecc-----
Confidence 44789999999999999998775 577899877766555544444444322 677999998877654311
Q ss_pred ceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC-----------ceeeEE
Q psy5911 855 TQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA-----------EQTDIN 923 (1242)
Q Consensus 855 ~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----------~~~~i~ 923 (1242)
+..-.-.+-..+.|+|+++-|++++..+= +..+-..+ .+..+..|+.|..- .++++-
T Consensus 170 --~~l~HLtrRldvAGRdiTryLi~LLl~rG---YafN~tAD-------FETVR~iKEKLCYisYd~e~e~kLalETTvL 237 (389)
T KOG0677|consen 170 --FVLPHLTRRLDVAGRDITRYLIKLLLRRG---YAFNHTAD-------FETVREIKEKLCYISYDLELEQKLALETTVL 237 (389)
T ss_pred --eehhhhhhhccccchhHHHHHHHHHHhhc---cccccccc-------hHHHHHHHhhheeEeechhhhhHhhhhheee
Confidence 11112223345699999999999887541 11111111 22334445544311 111111
Q ss_pred eccccccCCCCeeeEEEEcHHHHH---HHHHHHH-----HHHHHHHHHHHHhcCCCcc--CcceEEEecCcCchHHHHHH
Q psy5911 924 LPYITADKNGPKHLNVKITRSKLE---SLVEDLI-----SKSLKPCEVALNDAKIDKS--KISEIILVGGQTRMPLVQKM 993 (1242)
Q Consensus 924 i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~~-----~~~~~~i~~~l~~~~~~~~--~i~~ViLvGG~s~ip~v~~~ 993 (1242)
++.... +..-.+.+-.+.|| .+++|.+ ..+.+++-.+++.+.++.. --.+|+|.|||+.-|.+-++
T Consensus 238 v~~YtL----PDGRvIkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVLSGGstMYPGLPSR 313 (389)
T KOG0677|consen 238 VESYTL----PDGRVIKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVLSGGSTMYPGLPSR 313 (389)
T ss_pred eeeeec----CCCcEEEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeeecCCcccCCCCcHH
Confidence 111110 01123555556665 3556543 2355666777777665432 25689999999999988777
Q ss_pred HHhhhc-------------------ccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 994 VSEFFE-------------------KEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 994 l~~~f~-------------------~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
|++.+. ..+-.++.-...|-.|.|.+|.++..
T Consensus 314 LEkElkqlyl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD 364 (389)
T KOG0677|consen 314 LEKELKQLYLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKD 364 (389)
T ss_pred HHHHHHHHHHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcC
Confidence 764431 11233445567788999998887764
No 164
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=96.30 E-value=0.083 Score=64.83 Aligned_cols=83 Identities=16% Similarity=0.164 Sum_probs=57.4
Q ss_pred EEcHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHH
Q psy5911 940 KITRSKLESLVE-DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 940 ~itr~~fe~~~~-~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
.-+|.+|-..+- .+.-.+...+....+..+. .++.|.++||.++++.+.+++.+.||.++....++ ++.++|||+
T Consensus 369 ~~~~~~l~rAvlEgia~~~~~~~~~~~~~~g~---~~~~i~~~GGga~s~~w~Qi~Adv~g~pv~~~~~~-e~~a~GaA~ 444 (505)
T TIGR01314 369 SHKKEHMIRAALEGVIYNLYTVALALVEVMGD---PLNMIQATGGFASSEVWRQMMSDIFEQEIVVPESY-ESSCLGACI 444 (505)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecCcccCHHHHHHHHHHcCCeeEecCCC-CcchHHHHH
Confidence 335565554332 2222333333333332332 58899999999999999999999999999766555 688999999
Q ss_pred hhhhhccc
Q psy5911 1019 QAGVLSGV 1026 (1242)
Q Consensus 1019 ~a~~l~~~ 1026 (1242)
.|+.-.|.
T Consensus 445 la~~~~G~ 452 (505)
T TIGR01314 445 LGLKALGL 452 (505)
T ss_pred HHHHhcCc
Confidence 99876653
No 165
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=96.22 E-value=0.026 Score=65.62 Aligned_cols=224 Identities=20% Similarity=0.227 Sum_probs=123.6
Q ss_pred HHHHHHHHHcCCce----eeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCC---ceEEEEEecCC
Q psy5911 793 QATKDAGKIAGLEV----LRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGE---TQFEVLSTNGD 865 (1242)
Q Consensus 793 ~~~~~Aa~~AGl~~----~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~---~~~~v~~~~~~ 865 (1242)
..+.++|+..||.. ..-+-+.-|.+++.+... ++ -|++=+|.+||++.+-+-....+. .....+-.+.-
T Consensus 232 ~Lt~e~A~~lGL~~~~~Vs~g~IDAhag~~Gv~~~~---~~-~l~~I~GTStC~m~~s~~~~~v~GvwGpy~~ai~Pg~~ 307 (544)
T COG1069 232 GLTPEAAQELGLPEGTVVSAGIIDAHAGAVGVGGAQ---PG-SLAMIAGTSTCHMLLSEKPRFVPGVWGPYDGAVLPGLW 307 (544)
T ss_pred ccCHHHHHHhCCCCCcEEeccceeccccccccccCC---CC-eEEEEeccceEEEEecCCceecCccccccccccCcchh
Confidence 45677888888843 222334444444443222 22 244457888888877653311100 11222222222
Q ss_pred CCCCchHHHHHHHHHHHHHhhh---------hcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccC----C
Q psy5911 866 TFLGGEDFDMRIINHLIYEFKI---------ENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADK----N 932 (1242)
Q Consensus 866 ~~lGG~~~D~~l~~~l~~~~~~---------~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~----~ 932 (1242)
..=||..-.-.+++|+.+...- +++.++ ......++..-+++.+...+.... -+-++.+.-+. |
T Consensus 308 ~~EgGQSatG~l~dhl~~~h~~~~e~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~-l~~l~~f~GNRsP~aD 384 (544)
T COG1069 308 LYEGGQSATGDLLDHLVRTHPAPLEQLAAHPKDGEEI--YESLAQRLELLTEAAAAIPPLASG-LHVLDWFNGNRSPLAD 384 (544)
T ss_pred hhcccchhhhHHHHHHHHhCCcccchhhccchhhhHH--HHHHHHHHHHHHhhHhccCcccCC-cEecccccCCcCCCCC
Confidence 3347888888888888765310 111000 112333444444555544432211 12222111100 0
Q ss_pred ----C-CeeeEEEEcHHHHHHHHHHHHHHHH---HHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccc
Q psy5911 933 ----G-PKHLNVKITRSKLESLVEDLISKSL---KPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK 1004 (1242)
Q Consensus 933 ----~-~~~~~~~itr~~fe~~~~~~~~~~~---~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~ 1004 (1242)
| ..++++.-+.+.+-.+..-.+.-+. ..|-+++++.++ .|+.|+.+||-.+.|.+.+.+.+..|.++..
T Consensus 385 p~l~G~i~GltL~T~~~~l~~lY~a~l~a~A~GtR~Iie~~~~~g~---~Id~l~~sGG~~KN~llmql~aDvtg~~v~i 461 (544)
T COG1069 385 PRLKGVITGLTLDTSPESLALLYRALLEATAFGTRAIIETFEDQGI---AIDTLFASGGIRKNPLLMQLYADVTGRPVVI 461 (544)
T ss_pred ccceeEEeccccCCCcHHHHHHHHHHHHHHHHhHHHHHHHHHHcCC---eeeEEEecCCcccCHHHHHHHHHhcCCeEEe
Confidence 0 1123344455544455555555443 344555556554 6899999999999999999999999998876
Q ss_pred cCCcchhhhhhHHHhhhhhcccc
Q psy5911 1005 DINPDEAVAVGASVQAGVLSGVV 1027 (1242)
Q Consensus 1005 ~~~p~~aVa~GAa~~a~~l~~~~ 1027 (1242)
+ ..+++++.|+|+.|+.-.+..
T Consensus 462 ~-~s~~a~llGsAm~~avAag~~ 483 (544)
T COG1069 462 P-ASDQAVLLGAAMFAAVAAGVH 483 (544)
T ss_pred e-cccchhhhHHHHHHHHHhccC
Confidence 6 678899999999999877643
No 166
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=96.20 E-value=0.0078 Score=63.77 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-cCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhh
Q psy5911 308 SLVEDLISKSLKPCEVALNDAKID-KSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 308 ~l~~~~~~~i~~~i~~~l~~~~~~-~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+++.-+++.+.-.++..++...-. ...++.|+++||.++.|.+.+++.+.||.++....+ .++.|.|||+.|+.
T Consensus 122 ~~~rAv~Egia~~~~~~~~~l~~~~~~~~~~i~~~GG~~~n~~~~q~~Advl~~~V~~~~~-~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 122 DLARAVLEGIAFSLRQILEELEELTGIPIRRIRVSGGGAKNPLWMQILADVLGRPVVRPEV-EEASALGAALLAAV 196 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCESEEEEESGGGGSHHHHHHHHHHHTSEEEEESS-STHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHhhhhccccccccceeeEeccccccChHHHHHHHHHhCCceEeCCC-CchHHHHHHHHHHh
Confidence 344444444444444444333111 234889999999999999999999999998876655 89999999999874
No 167
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=96.11 E-value=0.25 Score=60.60 Aligned_cols=205 Identities=17% Similarity=0.206 Sum_probs=105.9
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEE-EeecCCCceEEEEEecC--C-----CCCCchH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE-IANVDGETQFEVLSTNG--D-----TFLGGED 872 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~-~~~~~~~~~~~v~~~~~--~-----~~lGG~~ 872 (1242)
..|.+++.-..+..||+++.+.... +. ++.-+|.+++-+..+. .......+.+....... + ...|+..
T Consensus 236 ~~g~pV~~g~~D~~aa~~G~g~~~~--g~--~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (504)
T PTZ00294 236 LEGVPITGCIGDQQAALIGHGCFEK--GD--AKNTYGTGCFLLMNTGTEIVFSKHGLLTTVCYQLGPNGPTVYALEGSIA 311 (504)
T ss_pred CCCCcEEEEecHHHHHHHhCcCCCC--Cc--eEEeeccceEEEEeeCCccccCCCCceEEEEEEecCCCCcEEEEechhh
Confidence 4577888888899999998876422 22 2223454433111111 00111112222222111 0 1123433
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccc----cCC----C-CeeeEEEEcH
Q psy5911 873 FDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITA----DKN----G-PKHLNVKITR 943 (1242)
Q Consensus 873 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~----~~~----~-~~~~~~~itr 943 (1242)
.--..++|+++.|.. ..+ ...+.+.+++.+ .. ..-+.+|++.. ..+ + ...++..-++
T Consensus 312 ~~g~~~~W~~~~~~~------~~~---~~~~~~~a~~~~---g~--~gl~~~P~l~G~r~P~~~~~arg~~~Gl~~~~~~ 377 (504)
T PTZ00294 312 VAGAGVEWLRDNMGL------ISH---PSEIEKLARSVK---DT--GGVVFVPAFSGLFAPYWRPDARGTIVGMTLKTTR 377 (504)
T ss_pred hhHHHHHHHHHHhCC------CCC---HHHHHHHHHhCC---CC--CCEEEeCcccCCCCCCCCCCCCEEEEccCCCCCH
Confidence 344556788776631 011 112333333332 11 12244555431 111 0 1122233456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 944 SKLESLVEDLISKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 944 ~~fe~~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
.++-..+-+-+.-....+-+.+++ .+. .++.|.++||.++++.+.+++.+.||.++.... ..++.++|||+.|+.
T Consensus 378 ~~i~rAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GG~a~s~~w~Qi~Adv~g~pV~~~~-~~e~~alGaAl~aa~ 453 (504)
T PTZ00294 378 AHIVRAALEAIALQTNDVIESMEKDAGI---ELNSLRVDGGLTKNKLLMQFQADILGKDIVVPE-MAETTALGAALLAGL 453 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC---CcceEEEecccccCHHHHHHHHHHhCCceEecC-cccchHHHHHHHHHh
Confidence 665543333222222222233333 243 378899999999999999999999999987555 555889999999987
Q ss_pred hcccc
Q psy5911 1023 LSGVV 1027 (1242)
Q Consensus 1023 l~~~~ 1027 (1242)
-.|..
T Consensus 454 a~G~~ 458 (504)
T PTZ00294 454 AVGVW 458 (504)
T ss_pred hcCcc
Confidence 76643
No 168
>KOG0680|consensus
Probab=95.96 E-value=0.27 Score=53.09 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=56.0
Q ss_pred CCcEEEEecCCCCHHHHHHH-HHHHHHcCCCeeeeechHHHHHHHhc---cCCC----CCCcEEEEEEeCCcceeeeEEE
Q psy5911 136 IEKAVITVPAYFNDSQRQAT-KDAGKIAGLEVLRIINEPTAAALAYG---LDKK----PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 136 ~~~~vitVPa~f~~~qr~~~-~~Aa~~AGl~~~~li~Ep~AAal~y~---~~~~----~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
-.++++|=|.+--++-.+.+ .-..+.-+++.+ ..-+.|+..++. .+.. ..+...+|+|-|-+-+-+.-+-
T Consensus 93 ~~~ivlTep~~~~psi~~~t~eilFEey~fd~v--~kttaa~lva~~~~~~~ne~~tt~~~~c~lVIDsGysfThIip~v 170 (400)
T KOG0680|consen 93 DHNIVLTEPCMTFPSIQEHTDEILFEEYQFDAV--LKTTAAVLVAFTKYVRNNEDSTTTSSECCLVIDSGYSFTHIIPVV 170 (400)
T ss_pred cceEEEecccccccchhhhHHHHHHHHhccceE--eecCHHHhcchhhhccCCccccccccceEEEEeCCCceEEEehhh
Confidence 45789999976554444444 334556666543 333333333332 2221 1355899999999876665443
Q ss_pred EEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHH
Q psy5911 208 IANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY 243 (1242)
Q Consensus 208 ~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~ 243 (1242)
-.........+ ..+||..++..|.+.+.-
T Consensus 171 ~g~~~~qaV~R-------iDvGGK~LTn~LKE~iSy 199 (400)
T KOG0680|consen 171 KGIPYYQAVKR-------IDVGGKALTNLLKETISY 199 (400)
T ss_pred cCcchhhceEE-------eecchHHHHHHHHHHhhh
Confidence 22211112222 246999999999887753
No 169
>PRK00047 glpK glycerol kinase; Provisional
Probab=95.81 E-value=0.25 Score=60.50 Aligned_cols=77 Identities=16% Similarity=0.280 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC
Q psy5911 309 LVEDLISKSLKPCEVALNDAK-IDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 386 (1242)
Q Consensus 309 l~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~ 386 (1242)
++.-+++.+.-.++..++... .....++.|.++||.+++|.+.+++.+.||.++..... .++.|+|||+.|+.-.|.
T Consensus 377 l~rAvlEgia~~~r~~~e~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~~-~e~~a~GaA~~A~~~~G~ 454 (498)
T PRK00047 377 IIRATLESIAYQTRDVLDAMQADSGIRLKELRVDGGAVANNFLMQFQADILGVPVERPVV-AETTALGAAYLAGLAVGF 454 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecCcccCHHHHHHHHHhhCCeeEecCc-ccchHHHHHHHHhhhcCc
Confidence 344444444444443333221 11124789999999999999999999999999875554 468899999999876553
No 170
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=95.71 E-value=0.018 Score=71.05 Aligned_cols=88 Identities=18% Similarity=0.226 Sum_probs=63.5
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHH
Q psy5911 938 NVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 938 ~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa 1017 (1242)
+..-+|..+..++.-+++.+.-.++.+++...-....++.|.++||.++++.+.+++.+.+|.++....++ ++.++|||
T Consensus 407 ~~~~~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~~~-e~~alGaA 485 (541)
T TIGR01315 407 SMDRSKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADACDMPVLIPYVN-EAVLHGAA 485 (541)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHHCCeeEecChh-HHHHHHHH
Confidence 34446766666666666666555444444332111247899999999999999999999999999766554 57899999
Q ss_pred Hhhhhhccc
Q psy5911 1018 VQAGVLSGV 1026 (1242)
Q Consensus 1018 ~~a~~l~~~ 1026 (1242)
+.|+.-.|.
T Consensus 486 ~lA~~~~G~ 494 (541)
T TIGR01315 486 MLGAKAAGT 494 (541)
T ss_pred HHHHHhcCc
Confidence 999876653
No 171
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=95.69 E-value=0.086 Score=61.11 Aligned_cols=85 Identities=25% Similarity=0.310 Sum_probs=53.7
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCeeeee---chHHHHHHHhccCC--CCCCcEEEEEEeCCcceeeeEEEEEeecC
Q psy5911 139 AVITVPAYFNDSQRQATKDAGKIAGLEVLRII---NEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIEIANVDG 213 (1242)
Q Consensus 139 ~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li---~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~Dvsv~~~~~~~~ 213 (1242)
+.||==+--.++.|..+..-+..||==++.-- -|+.-|+-..|... ......|+=+|+||||+.+++++-.+
T Consensus 88 VIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S~~~~~~V~NiDIGGGTtN~avf~~G~--- 164 (473)
T PF06277_consen 88 VIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALSKEHHTVVANIDIGGGTTNIAVFDNGE--- 164 (473)
T ss_pred EEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHhhhhCCeEEEEEeCCCceeEEEEECCE---
Confidence 56676666677888888888888873222211 35554544333221 13567788899999999999997654
Q ss_pred CceEEEEEecCCCCcchHH
Q psy5911 214 ETQFEVLSTNGDTFLGGED 232 (1242)
Q Consensus 214 ~~~~~v~~~~~~~~lGG~~ 232 (1242)
++.+.. .++||+-
T Consensus 165 -----v~~T~c-l~IGGRL 177 (473)
T PF06277_consen 165 -----VIDTAC-LDIGGRL 177 (473)
T ss_pred -----EEEEEE-EeeccEE
Confidence 333332 4468864
No 172
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=95.67 E-value=0.19 Score=61.50 Aligned_cols=81 Identities=22% Similarity=0.233 Sum_probs=55.5
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHH
Q psy5911 939 VKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 939 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
..-+|.+|-..+-+-+.-.....-+.|.+.. ...++.|.++||+|+++.+.+++.+.+|.++..+...+.+.+-||++
T Consensus 368 ~~~~~~~l~ravlEgva~~l~~~~~~l~~~~--g~~~~~i~~~GGgars~~w~Qi~Ad~~g~~v~~~~~~e~~a~g~A~~ 445 (502)
T COG1070 368 LPHTRAHLARAVLEGVAFALADGLEALEELG--GKPPSRVRVVGGGARSPLWLQILADALGLPVVVPEVEEAGALGGAAL 445 (502)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCccEEEEECCcccCHHHHHHHHHHcCCeeEecCcccchHHHHHHH
Confidence 4457777776655555555555555666552 13467899999999999999999999999998555544444444444
Q ss_pred hhh
Q psy5911 1019 QAG 1021 (1242)
Q Consensus 1019 ~a~ 1021 (1242)
.+.
T Consensus 446 ~~~ 448 (502)
T COG1070 446 AAA 448 (502)
T ss_pred HHH
Confidence 443
No 173
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=95.45 E-value=5.1 Score=44.64 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc-----ccccccCCCcchhhHhHHHHhh
Q psy5911 308 SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-----EKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 308 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-----~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+++....+.+...+...+......... |+|+||..+.+.+.+.+.+.+ ..++..+..|....|.|||++|
T Consensus 197 ~Il~~a~~~la~~i~~~~~~~~~~~~~---v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 197 DILAEAADELAELIKAVLKRLGPEKEP---VVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTCCCCS---EEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCe---EEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 455555566666666666655543222 999999999987777775555 2345567789999999999976
No 174
>PLN02669 xylulokinase
Probab=95.41 E-value=0.037 Score=68.22 Aligned_cols=77 Identities=16% Similarity=0.245 Sum_probs=54.7
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 941 ITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 941 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
.+|.++- +-+++.+.-.++..++..+.. ..++.|+++||+|+++.+.+++.+.||.++.....+ ++.|+|||+.|
T Consensus 416 ~~~~~~~---RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVlg~pV~~~~~~-ea~alGAA~~A 490 (556)
T PLN02669 416 FDPPSEV---RAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIFGCDVYTVQRP-DSASLGAALRA 490 (556)
T ss_pred CCHHHHH---HHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHcCCCeEecCCC-CchHHHHHHHH
Confidence 3565543 334444433333333333322 358899999999999999999999999988766555 68899999999
Q ss_pred hh
Q psy5911 1021 GV 1022 (1242)
Q Consensus 1021 ~~ 1022 (1242)
+.
T Consensus 491 ~~ 492 (556)
T PLN02669 491 AH 492 (556)
T ss_pred HH
Confidence 75
No 175
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=95.19 E-value=0.057 Score=66.67 Aligned_cols=84 Identities=17% Similarity=0.294 Sum_probs=62.8
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCc-CchHHHHHHHHhhhcccccccCCcchhhhhhHH
Q psy5911 939 VKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQ-TRMPLVQKMVSEFFEKEVKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 939 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~-s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa 1017 (1242)
..-+|.+|-..+-+-+.-....+-+.|++.+. .++.|+++||. ++++.+.+++.+.||.++....++ ++.|.|||
T Consensus 403 ~~~~~~~~~RAvlEgia~~~~~~l~~l~~~g~---~~~~i~~~GGg~a~s~~w~Qi~Adv~g~pV~~~~~~-e~~a~GaA 478 (536)
T TIGR01234 403 LATDAPLLYRALIEATAFGTRMIMETFTDSGV---PVEELMAAGGIARKNPVIMQIYADVTNRPLQIVASD-QAPALGAA 478 (536)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCccccCHHHHHHHHHhhCCeeEeccCC-cchhHHHH
Confidence 44567776665554444444444555555443 58899999999 999999999999999999766654 68899999
Q ss_pred Hhhhhhccc
Q psy5911 1018 VQAGVLSGV 1026 (1242)
Q Consensus 1018 ~~a~~l~~~ 1026 (1242)
+.|+.-.|.
T Consensus 479 ~lA~~~~G~ 487 (536)
T TIGR01234 479 IFAAVAAGV 487 (536)
T ss_pred HHHHHHcCC
Confidence 999876653
No 176
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=95.18 E-value=0.047 Score=67.41 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=64.7
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
.-+|..+..++.-+++.+.-.++.+++...-....++.|.++||.++++.+.+++.+.+|.++....++ ++.++|||+.
T Consensus 409 ~~~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~~~-e~~alGaA~l 487 (541)
T TIGR01315 409 DRSKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADACDMPVLIPYVN-EAVLHGAAML 487 (541)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHHCCeeEecChh-HHHHHHHHHH
Confidence 335666777777777777666665555432112347899999999999999999999999999876655 5789999999
Q ss_pred hhhhcC
Q psy5911 380 AGVLSG 385 (1242)
Q Consensus 380 a~~l~~ 385 (1242)
|+.-.|
T Consensus 488 A~~~~G 493 (541)
T TIGR01315 488 GAKAAG 493 (541)
T ss_pred HHHhcC
Confidence 987555
No 177
>PLN02295 glycerol kinase
Probab=95.02 E-value=0.072 Score=65.38 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=58.5
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--CccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhh
Q psy5911 939 VKITRSKLESLVEDLISKSLKPCEVALNDA-KI--DKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVG 1015 (1242)
Q Consensus 939 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~-~~--~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~G 1015 (1242)
..-+|.++-..+-+-+.--...+-+.+++. +. ....++.|.++||++++|.+.+++.+.||.++... +..++.|+|
T Consensus 374 ~~~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~~~~~~~~~i~~~GGga~s~~w~Qi~ADv~g~pV~~~-~~~e~~alG 452 (512)
T PLN02295 374 RFTNKAHIARAVLESMCFQVKDVLDAMRKDAGEEKSHKGLFLLRVDGGATANNLLMQIQADLLGSPVVRP-ADIETTALG 452 (512)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceEEEeccchhCHHHHHHHHHhcCCceEec-CccccHHHH
Confidence 334566665544333332233333344433 21 12347889999999999999999999999999644 445788999
Q ss_pred HHHhhhhhccc
Q psy5911 1016 ASVQAGVLSGV 1026 (1242)
Q Consensus 1016 Aa~~a~~l~~~ 1026 (1242)
||+.|+.-.|.
T Consensus 453 aA~~A~~~~G~ 463 (512)
T PLN02295 453 AAYAAGLAVGL 463 (512)
T ss_pred HHHHHHhhcCc
Confidence 99999876653
No 178
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=94.98 E-value=0.071 Score=64.45 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=62.4
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhH
Q psy5911 938 NVKITRSKLESLVEDLISKSLKPCEVALNDA-KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGA 1016 (1242)
Q Consensus 938 ~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~-~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GA 1016 (1242)
+..-+|.++-..+-+-+.-....+-+.+++. +. .++.|.++||+++++.+.+++.+.+|.++... . .++.|+||
T Consensus 353 ~~~~~~~~l~RAv~Egva~~~r~~~e~l~~~~~~---~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~-~-~e~~a~Ga 427 (454)
T TIGR02627 353 PIPESDAELARCIFDSLALLYRQVLLELAELRGK---PISQLHIVGGGSQNAFLNQLCADACGIRVIAG-P-VEASTLGN 427 (454)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---CcCEEEEECChhhhHHHHHHHHHHhCCceEcC-C-chHHHHHH
Confidence 3445777776655544444444445555543 32 47899999999999999999999999999643 3 67899999
Q ss_pred HHhhhhhccccc
Q psy5911 1017 SVQAGVLSGVVK 1028 (1242)
Q Consensus 1017 a~~a~~l~~~~~ 1028 (1242)
|+.|+.-.|..+
T Consensus 428 A~~a~~~~G~~~ 439 (454)
T TIGR02627 428 IGVQLMALDEIN 439 (454)
T ss_pred HHHHHHhcCCcC
Confidence 999987666433
No 179
>PLN02669 xylulokinase
Probab=94.89 E-value=0.067 Score=65.93 Aligned_cols=76 Identities=17% Similarity=0.267 Sum_probs=56.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
+|.+ ++.-+++.+.-.++..++..+.. ..++.|+++||+|+++.+.+++.+.||.++.....+ ++.|+|||+.|+
T Consensus 417 ~~~~---~~RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVlg~pV~~~~~~-ea~alGAA~~A~ 491 (556)
T PLN02669 417 DPPS---EVRAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIFGCDVYTVQRP-DSASLGAALRAA 491 (556)
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHcCCCeEecCCC-CchHHHHHHHHH
Confidence 4544 34455555544444454444332 357899999999999999999999999988766665 688999999997
Q ss_pred h
Q psy5911 382 V 382 (1242)
Q Consensus 382 ~ 382 (1242)
.
T Consensus 492 ~ 492 (556)
T PLN02669 492 H 492 (556)
T ss_pred H
Confidence 5
No 180
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=94.87 E-value=0.05 Score=66.55 Aligned_cols=84 Identities=19% Similarity=0.284 Sum_probs=58.9
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHH
Q psy5911 939 VKITRSKLESLVEDLISKSLKPCEVALNDA-KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 939 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~-~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa 1017 (1242)
..-+|.++-..+-+-+.--...+-+.+++. +. .++.|.++||.++++.+.+++.+.||.++.. .+..++.|+|||
T Consensus 366 ~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GGga~s~~w~Qi~ADv~g~pv~~-~~~~e~~alGaA 441 (493)
T TIGR01311 366 RGTTKAHIARAALEAIAFQTRDVLEAMEKDAGV---EITKLRVDGGMTNNNLLMQFQADILGVPVVR-PKVTETTALGAA 441 (493)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCceEEEecccccCHHHHHHHHHhcCCeeEe-cCCCcchHHHHH
Confidence 444566666544433333333333444432 32 4789999999999999999999999999975 444578899999
Q ss_pred Hhhhhhccc
Q psy5911 1018 VQAGVLSGV 1026 (1242)
Q Consensus 1018 ~~a~~l~~~ 1026 (1242)
+.|+.-.|.
T Consensus 442 ~~a~~~~G~ 450 (493)
T TIGR01311 442 YAAGLAVGY 450 (493)
T ss_pred HHHHhhcCc
Confidence 999876653
No 181
>PRK04123 ribulokinase; Provisional
Probab=94.77 E-value=0.054 Score=67.18 Aligned_cols=82 Identities=16% Similarity=0.328 Sum_probs=58.1
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCc-CchHHHHHHHHhhhcccccccCCcchhhhhhHHH
Q psy5911 940 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQ-TRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 940 ~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~-s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
.-+|.++-..+-+-+.--...+-+.|++.+. .++.|.++||+ ++++.+.+++.+.||.++.... +.|+.|+|||+
T Consensus 407 ~~~~~~l~RAvlEgia~~~~~~~e~l~~~g~---~~~~i~~~GGg~s~s~~w~Qi~ADv~g~pV~~~~-~~e~~alGaA~ 482 (548)
T PRK04123 407 GTDAPDIYRALIEATAFGTRAIMECFEDQGV---PVEEVIAAGGIARKNPVLMQIYADVLNRPIQVVA-SDQCPALGAAI 482 (548)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CcceEEEeCCCcccCHHHHHHHHHhcCCceEecC-ccccchHHHHH
Confidence 4466665544333333333334444444443 47889999999 9999999999999999986444 56788999999
Q ss_pred hhhhhcc
Q psy5911 1019 QAGVLSG 1025 (1242)
Q Consensus 1019 ~a~~l~~ 1025 (1242)
.|+.-.|
T Consensus 483 lA~~~~G 489 (548)
T PRK04123 483 FAAVAAG 489 (548)
T ss_pred HHHHHhc
Confidence 9987655
No 182
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=94.77 E-value=0.27 Score=57.61 Aligned_cols=81 Identities=23% Similarity=0.331 Sum_probs=60.0
Q ss_pred cHHHHHHHHHHHHHHHHHH---HHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHH
Q psy5911 302 TRSKLESLVEDLISKSLKP---CEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~---i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 378 (1242)
+.+.+-.+..-.++-+.-- |-+++++.+ -.|+.|+.+||-.+.|.+.+.+.+..|.++..+ ..+++++.|+|+
T Consensus 399 ~~~~l~~lY~a~l~a~A~GtR~Iie~~~~~g---~~Id~l~~sGG~~KN~llmql~aDvtg~~v~i~-~s~~a~llGsAm 474 (544)
T COG1069 399 SPESLALLYRALLEATAFGTRAIIETFEDQG---IAIDTLFASGGIRKNPLLMQLYADVTGRPVVIP-ASDQAVLLGAAM 474 (544)
T ss_pred CcHHHHHHHHHHHHHHHHhHHHHHHHHHHcC---CeeeEEEecCCcccCHHHHHHHHHhcCCeEEee-cccchhhhHHHH
Confidence 4444445555555544433 333444444 458999999999999999999999999988766 667899999999
Q ss_pred hhhhhcCC
Q psy5911 379 QAGVLSGV 386 (1242)
Q Consensus 379 ~a~~l~~~ 386 (1242)
.|+.-.+.
T Consensus 475 ~~avAag~ 482 (544)
T COG1069 475 FAAVAAGV 482 (544)
T ss_pred HHHHHhcc
Confidence 99876654
No 183
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=94.62 E-value=0.098 Score=64.40 Aligned_cols=81 Identities=20% Similarity=0.273 Sum_probs=58.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 942 TRSKLESLVEDLISKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 942 tr~~fe~~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+|.++-..+-+-+.-....+-+.+++ .+. .++.|.++||+++++.+.+++.+.+|.++....++ ++.++|||+.|
T Consensus 379 ~~~~~~RAvlEgia~~~~~~l~~l~~~~g~---~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~~~-e~~alGaA~lA 454 (520)
T PRK10939 379 NKATLFRALEENAAIVSACNLQQIAAFSGV---FPSSLVFAGGGSKGKLWSQILADVTGLPVKVPVVK-EATALGCAIAA 454 (520)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEeCCcccCHHHHHHHHHhcCCeeEEeccc-CchHHHHHHHH
Confidence 56666554444433333344444444 243 47899999999999999999999999999866654 57899999999
Q ss_pred hhhccc
Q psy5911 1021 GVLSGV 1026 (1242)
Q Consensus 1021 ~~l~~~ 1026 (1242)
+.-.|.
T Consensus 455 ~~~~G~ 460 (520)
T PRK10939 455 GVGAGI 460 (520)
T ss_pred HHHhCC
Confidence 876653
No 184
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=94.57 E-value=0.11 Score=62.83 Aligned_cols=80 Identities=15% Similarity=0.112 Sum_probs=58.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 942 TRSKLESLVEDLISKSLKPCEVALNDA-KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 942 tr~~fe~~~~~~~~~~~~~i~~~l~~~-~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+|.+|-..+-+-+.-....+-+.|++. +. .++.|.++||+++++.+.+++.+.+|.++.... .++.++|||+.|
T Consensus 345 ~~~~l~RAvlEgva~~~r~~l~~l~~~~g~---~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~--~ea~alGaa~~a 419 (471)
T PRK10640 345 SDAELARCIFDSLALLYADVLHELAQLRGE---PFSQLHIVGGGCQNALLNQLCADACGIRVIAGP--VEASTLGNIGIQ 419 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CcceEEEECChhhhHHHHHHHHHHhCCCeeeCC--hhHHHHHHHHHH
Confidence 666666555444444444444455543 32 478899999999999999999999999996543 379999999999
Q ss_pred hhhccc
Q psy5911 1021 GVLSGV 1026 (1242)
Q Consensus 1021 ~~l~~~ 1026 (1242)
+.-.|.
T Consensus 420 ~~a~G~ 425 (471)
T PRK10640 420 LMTLDE 425 (471)
T ss_pred HHHcCC
Confidence 876664
No 185
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=94.21 E-value=0.097 Score=63.46 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=56.8
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHH
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEV---ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGA 376 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~---~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GA 376 (1242)
.-+|.+| +.-+++.+.-.++. .+++.+ ...++.|.++||.+++|.+.+++.+.||.++....++ ++.++||
T Consensus 361 ~~~~~~l---~rAvlEgia~~~r~~~e~l~~~~--~~~~~~i~~~GGga~s~~w~Qi~Adv~g~pV~~~~~~-e~~~lGa 434 (465)
T TIGR02628 361 NTTRGHI---YRAALEGLTAQLKRNLQMLEQIG--QFKASELLLVGGGSKNTLWNQIRANMLDIPVKVVDDA-ETTVAGA 434 (465)
T ss_pred CCCHHHH---HHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEEecCccCCHHHHHHhhhhcCCeeEeccCC-cchHHHH
Confidence 3345554 44445544443333 333332 1247889999999999999999999999999766665 6789999
Q ss_pred HHhhhhhcC
Q psy5911 377 SVQAGVLSG 385 (1242)
Q Consensus 377 a~~a~~l~~ 385 (1242)
|+.|+.-.|
T Consensus 435 A~~a~~a~G 443 (465)
T TIGR02628 435 AMFGFYGVG 443 (465)
T ss_pred HHHHHHhcC
Confidence 999987655
No 186
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=94.15 E-value=0.11 Score=63.66 Aligned_cols=52 Identities=25% Similarity=0.434 Sum_probs=44.9
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 386 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~ 386 (1242)
.++.|.++||.++++.+.+++.+.||.++.... ..++.|+|||+.|+.-.|.
T Consensus 406 ~~~~i~~~GG~a~s~~w~Qi~Adv~g~pV~~~~-~~e~~alGaAl~aa~a~G~ 457 (504)
T PTZ00294 406 ELNSLRVDGGLTKNKLLMQFQADILGKDIVVPE-MAETTALGAALLAGLAVGV 457 (504)
T ss_pred CcceEEEecccccCHHHHHHHHHHhCCceEecC-cccchHHHHHHHHHhhcCc
Confidence 378899999999999999999999999987665 4557899999999876653
No 187
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=94.05 E-value=0.11 Score=63.68 Aligned_cols=51 Identities=25% Similarity=0.401 Sum_probs=44.3
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.++.|.++||.++++.+.+++.+.||.++..... .++.|+|||+.|+.-.|
T Consensus 399 ~~~~i~~~GGga~s~~w~Qi~ADv~g~pv~~~~~-~e~~alGaA~~a~~~~G 449 (493)
T TIGR01311 399 EITKLRVDGGMTNNNLLMQFQADILGVPVVRPKV-TETTALGAAYAAGLAVG 449 (493)
T ss_pred CCceEEEecccccCHHHHHHHHHhcCCeeEecCC-CcchHHHHHHHHHhhcC
Confidence 4789999999999999999999999999976444 57889999999987655
No 188
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=94.00 E-value=0.18 Score=48.27 Aligned_cols=49 Identities=22% Similarity=0.280 Sum_probs=27.2
Q ss_pred EEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcc--hHHHH--HHHHHHHH
Q psy5911 191 IVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG--GEDFD--MRIINHLI 242 (1242)
Q Consensus 191 vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lG--G~~iD--~~l~~~l~ 242 (1242)
|+++|+|++++.+++++.... +.++++.......-| |..|. +.+.+-+.
T Consensus 1 i~~iDiGs~~~~~~i~~~~~~---~~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i~ 53 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDGSD---GYIRVLGVGEVPSKGIKGGHITDIEDISKAIK 53 (120)
T ss_dssp EEEEEE-SSSEEEEEEETTEE---EEEEEES----------HHHHH--HHHHHHHT
T ss_pred CEEEEcCCCcEEEEEEEeCCC---CcEEEEEEecccccccCCCEEEEHHHHHHHHH
Confidence 578899999999999987331 445554322111111 66666 55555443
No 189
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=93.97 E-value=0.13 Score=62.93 Aligned_cols=51 Identities=29% Similarity=0.470 Sum_probs=44.9
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.++.|+++||.++++.+.+++.+.||.++.... ..++.|+|||+.|+.-.+
T Consensus 390 ~~~~i~~~GG~s~s~~~~Q~~Adv~g~pv~~~~-~~e~~a~GaA~~a~~~~g 440 (481)
T TIGR01312 390 PIQSIRLIGGGAKSPAWRQMLADIFGTPVDVPE-GEEGPALGAAILAAWALG 440 (481)
T ss_pred CcceEEEeccccCCHHHHHHHHHHhCCceeecC-CCcchHHHHHHHHHHhcC
Confidence 478999999999999999999999999987655 666889999999987665
No 190
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=93.80 E-value=0.14 Score=63.38 Aligned_cols=51 Identities=22% Similarity=0.451 Sum_probs=45.0
Q ss_pred CcceEEEecCc-cChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 334 KISEIILVGGQ-TRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 334 ~i~~ViLvGG~-s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.++.|+++||. ++++.+.+++.+.||.++....++ ++.|+|||+.|+.-.|
T Consensus 435 ~~~~i~~~GGg~a~s~~w~Qi~Adv~g~pV~~~~~~-e~~a~GaA~lA~~~~G 486 (536)
T TIGR01234 435 PVEELMAAGGIARKNPVIMQIYADVTNRPLQIVASD-QAPALGAAIFAAVAAG 486 (536)
T ss_pred CcceEEEeCCccccCHHHHHHHHHhhCCeeEeccCC-cchhHHHHHHHHHHcC
Confidence 58899999999 999999999999999999776664 6889999999987655
No 191
>PRK04123 ribulokinase; Provisional
Probab=93.78 E-value=0.13 Score=63.78 Aligned_cols=80 Identities=18% Similarity=0.323 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCc-cChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQ-TRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~-s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.++ +.-+++.+.-.++.+++...-....++.|.++||. ++++.+.+++.+.||.++.... +.|+.|+|||+.|
T Consensus 409 ~~~~l---~RAvlEgia~~~~~~~e~l~~~g~~~~~i~~~GGg~s~s~~w~Qi~ADv~g~pV~~~~-~~e~~alGaA~lA 484 (548)
T PRK04123 409 DAPDI---YRALIEATAFGTRAIMECFEDQGVPVEEVIAAGGIARKNPVLMQIYADVLNRPIQVVA-SDQCPALGAAIFA 484 (548)
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCcccCHHHHHHHHHhcCCceEecC-ccccchHHHHHHH
Confidence 45544 44444444433333333221112247899999999 9999999999999999986554 4578899999999
Q ss_pred hhhcC
Q psy5911 381 GVLSG 385 (1242)
Q Consensus 381 ~~l~~ 385 (1242)
+.-.|
T Consensus 485 ~~~~G 489 (548)
T PRK04123 485 AVAAG 489 (548)
T ss_pred HHHhc
Confidence 87554
No 192
>PRK10331 L-fuculokinase; Provisional
Probab=93.74 E-value=0.14 Score=62.23 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=56.4
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHH
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEVALNDAK-IDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 378 (1242)
.-+|.++ +.-+++.+.-.++..++... .....++.|.++||.+++|.+.+++.+.||.++..... .++.++|||+
T Consensus 357 ~~~~~~l---~rAvlEgia~~~~~~~~~l~~~~~~~~~~i~~~GGga~s~~w~Qi~Advlg~pV~~~~~-~e~~a~GaA~ 432 (470)
T PRK10331 357 NTTRGHF---YRAALEGLTAQLKRNLQVLEKIGHFKASELLLVGGGSRNALWNQIKANMLDIPIKVLDD-AETTVAGAAM 432 (470)
T ss_pred CcCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEcccccCHHHHHHHHHhcCCeeEecCc-ccchHHHHHH
Confidence 3456554 34444444433333333221 11224789999999999999999999999999976654 4688999999
Q ss_pred hhhhhcC
Q psy5911 379 QAGVLSG 385 (1242)
Q Consensus 379 ~a~~l~~ 385 (1242)
.|+.-.|
T Consensus 433 la~~~~G 439 (470)
T PRK10331 433 FGWYGVG 439 (470)
T ss_pred HHHHhcC
Confidence 9987655
No 193
>KOG2517|consensus
Probab=93.59 E-value=0.17 Score=59.73 Aligned_cols=53 Identities=28% Similarity=0.487 Sum_probs=48.9
Q ss_pred cCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhccc
Q psy5911 973 SKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 1026 (1242)
Q Consensus 973 ~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~ 1026 (1242)
..++.+.+.||.|+.|.+.+.+++.+|.++..+.+++. ++.|||+.|+..++.
T Consensus 413 ~~i~~L~~~GG~s~N~ll~Q~~ADi~g~pv~~p~~~e~-~~~GaA~l~~~a~~~ 465 (516)
T KOG2517|consen 413 HPISTLRVCGGLSKNPLLMQLQADILGLPVVRPQDVEA-VALGAAMLAGAASGK 465 (516)
T ss_pred CCcceeeeccccccCHHHHHHHHHHhCCccccccchhH-HHHHHHHHHHhhcCC
Confidence 46888999999999999999999999999999999888 999999999988764
No 194
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=93.52 E-value=0.16 Score=62.40 Aligned_cols=51 Identities=24% Similarity=0.323 Sum_probs=45.0
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.++.|.++||.++++.+.+++.+.||.++....++ ++.++|||+.|+.-.|
T Consensus 401 ~~~~i~~~GGga~s~~w~Qi~Adv~g~pv~~~~~~-e~~a~GaA~la~~~~G 451 (505)
T TIGR01314 401 PLNMIQATGGFASSEVWRQMMSDIFEQEIVVPESY-ESSCLGACILGLKALG 451 (505)
T ss_pred CCcEEEEecCcccCHHHHHHHHHHcCCeeEecCCC-CcchHHHHHHHHHhcC
Confidence 48899999999999999999999999999766655 5889999999987655
No 195
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=93.50 E-value=0.62 Score=51.27 Aligned_cols=46 Identities=22% Similarity=0.206 Sum_probs=39.5
Q ss_pred CCcceEEEecC-ccChHHHHHHHHHhc---ccccccCCCcchhhHhHHHH
Q psy5911 333 SKISEIILVGG-QTRMPLVQKMVSEFF---EKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 333 ~~i~~ViLvGG-~s~ip~v~~~l~~~f---~~~~~~~~~p~~ava~GAa~ 378 (1242)
..+..|+++|| .+..|.+++.+...+ +.+...+.|+...+|.||++
T Consensus 229 ~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 229 YNIDRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred cCCCeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 45788999999 677999999998777 56678888999999999986
No 196
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=93.37 E-value=0.16 Score=61.36 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=44.1
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 386 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~ 386 (1242)
.++.|.++||+++.+.+.+++.+.+|.++... +.++.|+|||+.|+.-.|.
T Consensus 387 ~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~--~~e~~a~GaA~~a~~~~G~ 437 (454)
T TIGR02627 387 PISQLHIVGGGSQNAFLNQLCADACGIRVIAG--PVEASTLGNIGVQLMALDE 437 (454)
T ss_pred CcCEEEEECChhhhHHHHHHHHHHhCCceEcC--CchHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999643 3678999999999876653
No 197
>PRK13317 pantothenate kinase; Provisional
Probab=93.33 E-value=0.25 Score=54.71 Aligned_cols=48 Identities=25% Similarity=0.295 Sum_probs=42.8
Q ss_pred CcceEEEec-CcCchHHHHHHHHhhh---cccccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVG-GQTRMPLVQKMVSEFF---EKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvG-G~s~ip~v~~~l~~~f---~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
.++.|+++| |.++.|.+++.+.+.+ +.++..+.+|..+.|.|||+++.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 356899999 7999999999999888 57788899999999999999875
No 198
>PLN02295 glycerol kinase
Probab=93.21 E-value=0.2 Score=61.47 Aligned_cols=51 Identities=24% Similarity=0.341 Sum_probs=44.3
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.++.|.++||++++|.+.+++.+.||.++.... ..++.|+|||+.|+.-.|
T Consensus 412 ~~~~i~~~GGga~s~~w~Qi~ADv~g~pV~~~~-~~e~~alGaA~~A~~~~G 462 (512)
T PLN02295 412 GLFLLRVDGGATANNLLMQIQADLLGSPVVRPA-DIETTALGAAYAAGLAVG 462 (512)
T ss_pred CcceEEEeccchhCHHHHHHHHHhcCCceEecC-ccccHHHHHHHHHHhhcC
Confidence 478899999999999999999999999996544 457889999999987665
No 199
>PRK03011 butyrate kinase; Provisional
Probab=93.03 E-value=5.3 Score=46.14 Aligned_cols=45 Identities=27% Similarity=0.249 Sum_probs=35.8
Q ss_pred CcceEEEecCccChHHHHHHHHHhcc----cccccCCCcchhhHhHHHH
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFE----KEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~----~~~~~~~~p~~ava~GAa~ 378 (1242)
++|.|+|.||.+..+.+.+.|++.+. ..+....+-.+|.+.||+.
T Consensus 295 dpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~r 343 (358)
T PRK03011 295 KVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALR 343 (358)
T ss_pred CCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 58999999999999999988887763 3445556667899999854
No 200
>KOG2531|consensus
Probab=92.97 E-value=0.27 Score=55.79 Aligned_cols=56 Identities=16% Similarity=0.321 Sum_probs=48.3
Q ss_pred HhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhh
Q psy5911 966 NDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 966 ~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+..+........|+.|||.||...|-+.|.+.||.+++.. +..++.|.|+|+.|+.
T Consensus 434 ~~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf~apVy~~-~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 434 EPLGFKSNPPTRILVTGGASRNEAILQIIADVFGAPVYTI-EGPNSAALGGAYRAAY 489 (545)
T ss_pred ccccCCCCCCceEEEecCccccHHHHHHHHHHhCCCeEee-cCCchhhHHHHHHHHH
Confidence 3445556678999999999999999999999999999855 8888999999999864
No 201
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=92.80 E-value=0.22 Score=61.28 Aligned_cols=51 Identities=27% Similarity=0.419 Sum_probs=44.7
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.++.|.++||.++++.+.+++.+.+|.++....++ ++.++|||+.|+.-.|
T Consensus 409 ~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~~~-e~~alGaA~lA~~~~G 459 (520)
T PRK10939 409 FPSSLVFAGGGSKGKLWSQILADVTGLPVKVPVVK-EATALGCAIAAGVGAG 459 (520)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHhcCCeeEEeccc-CchHHHHHHHHHHHhC
Confidence 47899999999999999999999999999866655 5789999999987655
No 202
>KOG2517|consensus
Probab=92.64 E-value=0.31 Score=57.56 Aligned_cols=75 Identities=23% Similarity=0.338 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCc-CCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC
Q psy5911 311 EDLISKSLKPCEVALNDAKIDK-SKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 386 (1242)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~-~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~ 386 (1242)
.-.++.+.--.+..|+...... ..|+.+.+.||.|+-|.+.+.+.+.+|.++..+.+++. ++.|||+.|+..++.
T Consensus 390 ~A~leai~fqtr~Il~am~~~~~~~i~~L~~~GG~s~N~ll~Q~~ADi~g~pv~~p~~~e~-~~~GaA~l~~~a~~~ 465 (516)
T KOG2517|consen 390 RAALEAIAFQTREILEAMERDGGHPISTLRVCGGLSKNPLLMQLQADILGLPVVRPQDVEA-VALGAAMLAGAASGK 465 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceeeeccccccCHHHHHHHHHHhCCccccccchhH-HHHHHHHHHHhhcCC
Confidence 3444444333333443332222 56888999999999999999999999999999999888 999999999988775
No 203
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=92.50 E-value=0.4 Score=45.94 Aligned_cols=48 Identities=23% Similarity=0.300 Sum_probs=26.2
Q ss_pred EEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCC--chHHH--HHHHHHH
Q psy5911 831 IVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG--GEDFD--MRIINHL 881 (1242)
Q Consensus 831 vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lG--G~~~D--~~l~~~l 881 (1242)
++++|+|++++.+++++.... +.++++..+....-| |..+. +.+.+-+
T Consensus 1 i~~iDiGs~~~~~~i~~~~~~---~~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i 52 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDGSD---GYIRVLGVGEVPSKGIKGGHITDIEDISKAI 52 (120)
T ss_dssp EEEEEE-SSSEEEEEEETTEE---EEEEEES----------HHHHH--HHHHHHH
T ss_pred CEEEEcCCCcEEEEEEEeCCC---CcEEEEEEecccccccCCCEEEEHHHHHHHH
Confidence 577899999999999997431 455665443222111 55555 5554443
No 204
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=92.49 E-value=0.28 Score=59.49 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=43.9
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV 386 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~ 386 (1242)
.++.|.++||+++++.+.+++.+.+|.++.... .++.++|||+.|+.-.|.
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADvlg~pV~~~~--~ea~alGaa~~a~~a~G~ 425 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADACGIRVIAGP--VEASTLGNIGIQLMTLDE 425 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHHhCCCeeeCC--hhHHHHHHHHHHHHHcCC
Confidence 478899999999999999999999999996543 378999999999876653
No 205
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=92.32 E-value=2.3 Score=49.69 Aligned_cols=58 Identities=17% Similarity=0.204 Sum_probs=40.0
Q ss_pred eEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHH
Q psy5911 297 LNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVS 355 (1242)
Q Consensus 297 ~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~ 355 (1242)
-.+.||..+++++.. .-.-+..-++-.|++++++.++|+.|+|.||++.---+++.+.
T Consensus 291 ~~i~itq~DIr~~ql-AKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~~~a~~ 348 (412)
T PF14574_consen 291 DDIYITQKDIREFQL-AKAAIRAGIEILLEEAGISPEDIDRVYLAGGFGNYLDPESAIR 348 (412)
T ss_dssp S-EEEEHHHHHHHHH-HHHHHHHHHHHHHHHTT--GGG--EEEEECSS-SEEEHHHHHH
T ss_pred CCEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeCcccccCCHHHHhh
Confidence 357899999987532 3345667788899999999999999999999998666665553
No 206
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=92.01 E-value=2 Score=52.36 Aligned_cols=57 Identities=23% Similarity=0.351 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcCCCeeeeechHHHHHHHh-ccCCC-CCCcEEEEEEeCCcceeeeEEE
Q psy5911 150 SQRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 150 ~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
+....+.++-+..|+++ ++|+..+=|.+.| +.... +.....+|+|+|||++.+++++
T Consensus 92 N~~~fl~~i~~~tGl~i-evIsG~eEA~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~ 150 (496)
T PRK11031 92 NADEFLAKAQEILGCPV-QVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGT 150 (496)
T ss_pred CHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHhhhhccCCCCCEEEEEecCCeeeEEEec
Confidence 34555666667789987 5666555555544 33222 2234578899999999999875
No 207
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=91.73 E-value=1.2 Score=49.04 Aligned_cols=46 Identities=22% Similarity=0.206 Sum_probs=39.7
Q ss_pred cCcceEEEecC-cCchHHHHHHHHhhh---cccccccCCcchhhhhhHHH
Q psy5911 973 SKISEIILVGG-QTRMPLVQKMVSEFF---EKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 973 ~~i~~ViLvGG-~s~ip~v~~~l~~~f---~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
..+..|+++|| .+..|.+++.+...+ +.+...+.++...+|.||++
T Consensus 229 ~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 229 YNIDRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred cCCCeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 35788999999 778999999998777 46778899999999999986
No 208
>PRK10854 exopolyphosphatase; Provisional
Probab=91.68 E-value=1.3 Score=54.06 Aligned_cols=56 Identities=27% Similarity=0.479 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHcCCCeeeeechHHHHHHHh-ccCCC-CCCcEEEEEEeCCcceeeeEEE
Q psy5911 151 QRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 151 qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
....+.++-+..|+++ ++|+..+=|.+.| +.... +..+..+|+|+|||++.+++++
T Consensus 98 ~~~fl~~i~~~tGl~i-~vIsG~EEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~ 155 (513)
T PRK10854 98 ATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE 155 (513)
T ss_pred HHHHHHHHHHHHCCCe-EEeCHHHHHHHHHhhhhcccCCCCCeEEEEeCCCeEEEEEec
Confidence 3444555566679987 5666665555555 33322 1234578899999999999986
No 209
>KOG0680|consensus
Probab=91.55 E-value=7.6 Score=42.50 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=55.5
Q ss_pred CCcEEEEecCCCCHHHHHHHHH-HHHHcCCceeeeechhHHHHHHcc---CCCC----CCCcEEEEEeeCCCceEEEEEE
Q psy5911 776 IEKAVITVPAYFNDSQRQATKD-AGKIAGLEVLRIINEPTAAALAYG---LDKK----PDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 776 ~~~~VitVPa~~~~~qr~~~~~-Aa~~AGl~~~~li~Ep~AAal~y~---~~~~----~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
-.++++|-|.+--+.-.+.+.+ ..+.-+|+.+ ..-+.|+..++. .+.. ......+|+|-|-+-|-+.-+-
T Consensus 93 ~~~ivlTep~~~~psi~~~t~eilFEey~fd~v--~kttaa~lva~~~~~~~ne~~tt~~~~c~lVIDsGysfThIip~v 170 (400)
T KOG0680|consen 93 DHNIVLTEPCMTFPSIQEHTDEILFEEYQFDAV--LKTTAAVLVAFTKYVRNNEDSTTTSSECCLVIDSGYSFTHIIPVV 170 (400)
T ss_pred cceEEEecccccccchhhhHHHHHHHHhccceE--eecCHHHhcchhhhccCCccccccccceEEEEeCCCceEEEehhh
Confidence 4578999998765554444444 4455666543 333333333332 2221 1245789999999877665443
Q ss_pred EeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 848 IANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 848 ~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
-...-..... -..+||..++..|.+++.
T Consensus 171 ~g~~~~qaV~-------RiDvGGK~LTn~LKE~iS 198 (400)
T KOG0680|consen 171 KGIPYYQAVK-------RIDVGGKALTNLLKETIS 198 (400)
T ss_pred cCcchhhceE-------EeecchHHHHHHHHHHhh
Confidence 2211111111 235699999999888774
No 210
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=91.42 E-value=1.2 Score=48.50 Aligned_cols=72 Identities=21% Similarity=0.190 Sum_probs=40.4
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCeeee---echHHHHHHHhccCC--CCCCcEEEEEEeCCcceeeeEEEEEe
Q psy5911 139 AVITVPAYFNDSQRQATKDAGKIAGLEVLRI---INEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIEIAN 210 (1242)
Q Consensus 139 ~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~l---i~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~Dvsv~~~~~ 210 (1242)
+.||=-..-..+.|.++..-...||==++.- --|+.-|.-..+... .+....++=+|+||||+..|++.-.+
T Consensus 90 vIITGEtArk~NA~~vl~alSg~aGDFVVAtAGPdLESiIAGkGaGA~t~Seqr~t~v~NlDIGGGTtN~slFD~Gk 166 (473)
T COG4819 90 VIITGETARKRNARPVLMALSGSAGDFVVATAGPDLESIIAGKGAGAQTLSEQRLTRVLNLDIGGGTTNYSLFDAGK 166 (473)
T ss_pred EEEeccccccccchHHHHHhhhcccceEEEecCCCHHHHhccCCccccchhhhhceEEEEEeccCCccceeeecccc
Confidence 4556555555666666655555555322211 123333332222211 12456688899999999999986554
No 211
>KOG2531|consensus
Probab=91.38 E-value=0.55 Score=53.36 Aligned_cols=56 Identities=16% Similarity=0.321 Sum_probs=48.0
Q ss_pred HHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhh
Q psy5911 326 NDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 326 ~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+..+........|+.|||.|+-..|-+.|.+.||.++... +-.++.|.|+|+.|+.
T Consensus 434 ~~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf~apVy~~-~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 434 EPLGFKSNPPTRILVTGGASRNEAILQIIADVFGAPVYTI-EGPNSAALGGAYRAAY 489 (545)
T ss_pred ccccCCCCCCceEEEecCccccHHHHHHHHHHhCCCeEee-cCCchhhHHHHHHHHH
Confidence 3455566678999999999999999999999999998865 7788999999998764
No 212
>KOG0681|consensus
Probab=90.05 E-value=3 Score=48.68 Aligned_cols=123 Identities=9% Similarity=0.008 Sum_probs=70.7
Q ss_pred eecChHHHHHHHHHHHHHHHHhHhcCC----CCcEEEEecCCCCHHHHHHHHHH-HHHcCCCeeeeechHHHHHHHhccC
Q psy5911 109 KKLAPPQISAEILKKMKSTAETFLNEK----IEKAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLD 183 (1242)
Q Consensus 109 ~~~~~~~v~a~~L~~l~~~a~~~~~~~----~~~~vitVPa~f~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~ 183 (1242)
..++-.++...+|.|+..+ +|.. ...+++|=+..=...+|+.|.+- .+.-|++-+.+=-...=+.++ ..
T Consensus 89 nVvtNwel~E~ilDY~F~~----LG~~~~~idhPIilTE~laNP~~~R~~m~elLFE~YgvP~V~yGIDslfS~~h--N~ 162 (645)
T KOG0681|consen 89 NVVTNWELMEQILDYIFGK----LGVDGQGIDHPIILTEALANPVYSRSEMVELLFETYGVPKVAYGIDSLFSFYH--NY 162 (645)
T ss_pred CccccHHHHHHHHHHHHHh----cCCCccCCCCCeeeehhccChHHHHHHHHHHHHHHcCCcceeechhhHHHHhh--cc
Confidence 3456667777777777665 4432 23477787776667788888765 455688765443222222111 11
Q ss_pred CCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHH
Q psy5911 184 KKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 244 (1242)
Q Consensus 184 ~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~ 244 (1242)
........+|+++|..+|-|-.+--+. . ++....-.++||...-.-|.+++..+
T Consensus 163 ~~~~~~~~liis~g~~~T~vipvldG~----~---il~~~kRiN~GG~qa~dYL~~Lmq~K 216 (645)
T KOG0681|consen 163 GKSSNKSGLIISMGHSATHVIPVLDGR----L---ILKDVKRINWGGYQAGDYLSRLMQLK 216 (645)
T ss_pred CcccCcceEEEecCCCcceeEEEecCc----h---hhhcceeeccCcchHHHHHHHHHhcc
Confidence 112333678889999999887664222 1 22333345679987665555554433
No 213
>smart00842 FtsA Cell division protein FtsA. FtsA is essential for bacterial cell division, and co-localizes to the septal ring with FtsZ. It has been suggested that the interaction of FtsA-FtsZ has arisen through coevolution in different bacterial strains PUBMED:9352931.
Probab=89.45 E-value=2.4 Score=44.29 Aligned_cols=30 Identities=43% Similarity=0.367 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCCCeeeeechHHHHHHH
Q psy5911 150 SQRQATKDAGKIAGLEVLRIINEPTAAALA 179 (1242)
Q Consensus 150 ~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~ 179 (1242)
...+.+.++.+.|||++..++.+|.|++.+
T Consensus 157 ~~v~n~~~~v~~agl~v~~i~~~~~A~~~a 186 (187)
T smart00842 157 SAIQNLEKCVERAGLEVDGIVLEPLASAEA 186 (187)
T ss_pred HHHHHHHHHHHHcCCchhhEEehhhhhEec
Confidence 347778899999999999999999998754
No 214
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=89.23 E-value=3 Score=47.18 Aligned_cols=54 Identities=26% Similarity=0.412 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCCeeeeechHHHHHHHh-ccCCCCCCcEEEEEEeCCcceeeeEEE
Q psy5911 153 QATKDAGKIAGLEVLRIINEPTAAALAY-GLDKKPDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 153 ~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
..+...-...|+++ ++++...=|.+.| +....-.....+++|+|||++.++.+.
T Consensus 89 ~~~~~i~~~tgi~i-~visg~eEa~l~~~gv~~~~~~~~~~v~DiGGGSte~~~~~ 143 (300)
T TIGR03706 89 EFLREAEAILGLPI-EVISGEEEARLIYLGVAHTLPIADGLVVDIGGGSTELILGK 143 (300)
T ss_pred HHHHHHHHHHCCCe-EEeChHHHHHHHHHHHHhCCCCCCcEEEEecCCeEEEEEec
Confidence 33444445679877 6777777776665 222111112238889999999999875
No 215
>PF13941 MutL: MutL protein
Probab=88.91 E-value=2.5 Score=49.93 Aligned_cols=59 Identities=25% Similarity=0.300 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHH-----HcCCCe------eeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEE
Q psy5911 149 DSQRQATKDAGK-----IAGLEV------LRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 149 ~~qr~~~~~Aa~-----~AGl~~------~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
+..|+++++... .-|++. -.+++-|.|+..+...-.......+|++|+||-||||-.+.
T Consensus 197 ~paR~~I~~~F~~~Ii~akGl~~~~~~~~~~i~PTP~AVl~~~~lla~~~~g~llvVDIGGATTDVhSv~ 266 (457)
T PF13941_consen 197 EPAREAIREVFLRHIIQAKGLSKLREMVDGPIMPTPAAVLRAAELLAEGGIGDLLVVDIGGATTDVHSVA 266 (457)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHhCCcccCCHHHHHHHHHHHHhcccCCEEEEEccCcccchhhhc
Confidence 344666665542 225533 34666676665443222222556789999999999997665
No 216
>KOG0681|consensus
Probab=88.57 E-value=0.43 Score=55.22 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCCcCC--cceEEEecCccChHHHHHHHHHhc------cc--ccccCCCcchhhHhHHHHhhhh
Q psy5911 317 SLKPCEVALNDAKIDKSK--ISEIILVGGQTRMPLVQKMVSEFF------EK--EVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~--i~~ViLvGG~s~ip~v~~~l~~~f------~~--~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+.+++..+|.....+... +..|+|+||+|.+|.+.+.|..-+ |. .+....||-..+=+||+.+|+.
T Consensus 539 l~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n 614 (645)
T KOG0681|consen 539 LAEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAAN 614 (645)
T ss_pred HHHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHHHHHHHhheecccCCceEEEecCCcchhhhhhhHHhhcC
Confidence 445566666654333222 889999999999999999998765 43 4667889999999999999975
No 217
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=88.44 E-value=3.5 Score=48.27 Aligned_cols=86 Identities=24% Similarity=0.293 Sum_probs=56.0
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHcCCceeee---echhHHHHHHccCCC--CCCCcEEEEEeeCCCceEEEEEEEeecC
Q psy5911 778 KAVITVPAYFNDSQRQATKDAGKIAGLEVLRI---INEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIEIANVD 852 (1242)
Q Consensus 778 ~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~l---i~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~dvsi~~~~~~~ 852 (1242)
-+.||==+.-.+++|..+..-+..||==++.- =.|+.-|+-..|... ......|+-+|+||||+.+++++-..
T Consensus 87 AVIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S~~~~~~V~NiDIGGGTtN~avf~~G~-- 164 (473)
T PF06277_consen 87 AVIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALSKEHHTVVANIDIGGGTTNIAVFDNGE-- 164 (473)
T ss_pred cEEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHhhhhCCeEEEEEeCCCceeEEEEECCE--
Confidence 36777777778888888888888887322221 135555554433322 13456789999999999999998654
Q ss_pred CCceEEEEEecCCCCCCchH
Q psy5911 853 GETQFEVLSTNGDTFLGGED 872 (1242)
Q Consensus 853 ~~~~~~v~~~~~~~~lGG~~ 872 (1242)
+..+.. .++||+.
T Consensus 165 ------v~~T~c-l~IGGRL 177 (473)
T PF06277_consen 165 ------VIDTAC-LDIGGRL 177 (473)
T ss_pred ------EEEEEE-EeeccEE
Confidence 333333 4568864
No 218
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=86.13 E-value=3.3 Score=45.26 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=45.8
Q ss_pred cceEEEecC--ccChH-HHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEe
Q psy5911 335 ISEIILVGG--QTRMP-LVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLD 394 (1242)
Q Consensus 335 i~~ViLvGG--~s~ip-~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d 394 (1242)
...|+|.|- +++.| .+++.|++.+..++..- .. ++.|.|+|+.|.-+.+..++++-++
T Consensus 263 ~~~IvLSGs~g~~r~~~~v~~~I~~~L~~~V~~L-~~-ksAA~G~AiIA~dI~gGk~~iLGi~ 323 (326)
T TIGR03281 263 EAGVVLAGSGGTLREPINFSGKIKRVLSCKVLVL-DS-ESAAIGLALIAEDIFSGKREILGID 323 (326)
T ss_pred CCcEEEeCcchhccCchHHHHHHHHHhCCCeEEe-cc-hhhhhhHHHHHHHHhCCcceEeeee
Confidence 458999987 99999 99999999998665432 22 8899999999988887766665443
No 219
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=85.41 E-value=3.4 Score=45.18 Aligned_cols=58 Identities=19% Similarity=0.314 Sum_probs=45.7
Q ss_pred cceEEEecC--cCchH-HHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEee
Q psy5911 975 ISEIILVGG--QTRMP-LVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLD 1034 (1242)
Q Consensus 975 i~~ViLvGG--~s~ip-~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~ 1034 (1242)
...|+|.|- +++.| .+++.|++.+..++.. +.. +..|.|+|+.|.-+.+..++++-++
T Consensus 263 ~~~IvLSGs~g~~r~~~~v~~~I~~~L~~~V~~-L~~-ksAA~G~AiIA~dI~gGk~~iLGi~ 323 (326)
T TIGR03281 263 EAGVVLAGSGGTLREPINFSGKIKRVLSCKVLV-LDS-ESAAIGLALIAEDIFSGKREILGID 323 (326)
T ss_pred CCcEEEeCcchhccCchHHHHHHHHHhCCCeEE-ecc-hhhhhhHHHHHHHHhCCcceEeeee
Confidence 458999997 99999 9999999999866543 333 8899999999988877666655433
No 220
>PRK09604 UGMP family protein; Validated
Probab=84.66 E-value=52 Score=37.78 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=36.4
Q ss_pred CcceEEEecCccChHHHHHHHHHhc---ccccccCC---CcchhhHhHHHHhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQA 380 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~---~p~~ava~GAa~~a 380 (1242)
+++.|+|+||.+.-.++++.|.+.+ +.++..+. --|.+++.|+|=+-
T Consensus 254 ~~~~lvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~p~~D~gisIg~ag~~ 306 (332)
T PRK09604 254 GVKTLVVAGGVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYE 306 (332)
T ss_pred CCCeEEEcChHHHHHHHHHHHHHHHHHCCCEEECCCCCCCcHHHHHHHHHHHH
Confidence 4778999999999999999999887 55555443 34788888887443
No 221
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=83.57 E-value=7 Score=46.96 Aligned_cols=94 Identities=19% Similarity=0.172 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCC---CHHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCC-Cc
Q psy5911 754 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYF---NDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPD-DR 829 (1242)
Q Consensus 754 ~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~---~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~-~~ 829 (1242)
++.....+..|+..++..-+.++.++.+ |=... -.+.-+.+..+-+..|+++--+=-|-+|--.++|....-. ..
T Consensus 51 ~eai~R~~~aL~~f~e~~~~~~~~~v~~-vATsA~R~A~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~~~~ 129 (492)
T COG0248 51 EEAIERALSALKRFAELLDGFGAEEVRV-VATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLPRKG 129 (492)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEEEE-ehhHHHHcCCCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCCCCC
Confidence 4455555666666665555555555322 21111 1223455777778889988555555565544444433322 66
Q ss_pred EEEEEeeCCCceEEEEEEE
Q psy5911 830 IIVVYDLGGGTFDISVIEI 848 (1242)
Q Consensus 830 ~vlV~D~GggT~dvsi~~~ 848 (1242)
..+|+|+|||+|.+++..-
T Consensus 130 ~~lv~DIGGGStEl~~g~~ 148 (492)
T COG0248 130 DGLVIDIGGGSTELVLGDN 148 (492)
T ss_pred CEEEEEecCCeEEEEEecC
Confidence 7899999999999999863
No 222
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
Probab=83.17 E-value=5.6 Score=42.04 Aligned_cols=69 Identities=23% Similarity=0.262 Sum_probs=39.9
Q ss_pred HHHHHHHHHhHhcCCCCcEEEEecCCCCHH-HHHHHHHHHHHcCCCeeeeechHHHHHHHhccCC---CCCCcEEEEEEe
Q psy5911 121 LKKMKSTAETFLNEKIEKAVITVPAYFNDS-QRQATKDAGKIAGLEVLRIINEPTAAALAYGLDK---KPDDRIIVVYDL 196 (1242)
Q Consensus 121 L~~l~~~a~~~~~~~~~~~vitVPa~f~~~-qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~---~~~~~~vlV~D~ 196 (1242)
..++.+..+..++.++ .++++-..|... .....++. |||-+.+..+ ....+.++++|+
T Consensus 76 Ve~Ii~~v~~Af~~pv--~~v~~~G~~~ssEa~~~~~~v----------------AAaNW~Ata~~~~e~~~dsci~VD~ 137 (330)
T COG1548 76 VEDIIDTVEKAFNCPV--YVVDVNGNFLSSEALKNPREV----------------AAANWVATARFLAEEIKDSCILVDM 137 (330)
T ss_pred HHHHHHHHHHhcCCce--EEEeccCcCcChhHhcCHHHH----------------HHhhhHHHHHHHHHhcCCceEEEec
Confidence 4566777777777655 789999888764 22212222 1221111100 113444566699
Q ss_pred CCcceeeeEEE
Q psy5911 197 GGGTFDISVIE 207 (1242)
Q Consensus 197 GggT~Dvsv~~ 207 (1242)
|..|+|+.-+.
T Consensus 138 GSTTtDIIPi~ 148 (330)
T COG1548 138 GSTTTDIIPIK 148 (330)
T ss_pred CCcccceEeec
Confidence 99999987664
No 223
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=82.66 E-value=8 Score=46.47 Aligned_cols=94 Identities=19% Similarity=0.172 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCC---CHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCC-Cc
Q psy5911 114 PQISAEILKKMKSTAETFLNEKIEKAVITVPAYF---NDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPD-DR 189 (1242)
Q Consensus 114 ~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f---~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~-~~ 189 (1242)
++.+...+..|+..++..-+.++.++.+ |=... -.+.-+.+..+-+..|+++--+=-|-+|--.++|....-. ..
T Consensus 51 ~eai~R~~~aL~~f~e~~~~~~~~~v~~-vATsA~R~A~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~~~~ 129 (492)
T COG0248 51 EEAIERALSALKRFAELLDGFGAEEVRV-VATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLPRKG 129 (492)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEEEE-ehhHHHHcCCCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCCCCC
Confidence 3444555555555555544555555322 22111 1334556777888889987555555555444444433322 66
Q ss_pred EEEEEEeCCcceeeeEEEE
Q psy5911 190 IIVVYDLGGGTFDISVIEI 208 (1242)
Q Consensus 190 ~vlV~D~GggT~Dvsv~~~ 208 (1242)
..+|+|+|||++.+++..-
T Consensus 130 ~~lv~DIGGGStEl~~g~~ 148 (492)
T COG0248 130 DGLVIDIGGGSTELVLGDN 148 (492)
T ss_pred CEEEEEecCCeEEEEEecC
Confidence 7889999999999999863
No 224
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=81.74 E-value=3.7 Score=47.79 Aligned_cols=74 Identities=20% Similarity=0.345 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHH----HhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhc
Q psy5911 949 LVEDLISKSLKPCEVAL----NDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 949 ~~~~~~~~~~~~i~~~l----~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
+++-.++.+.-...+++ ++++. ++..+-+=||.|+..++.+...+.+|.+|.++.+ .|+.|+|||+.|+.-.
T Consensus 376 i~RA~LEsiayQ~~dv~~aM~~d~~~---~~~~LrvDGG~s~n~~lmQfqADilg~~V~Rp~~-~EtTAlGaA~lAGla~ 451 (499)
T COG0554 376 IARATLESIAYQTRDVLEAMEKDSGI---KLTRLRVDGGASRNNFLMQFQADILGVPVERPVV-LETTALGAAYLAGLAV 451 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CceeEEEcCccccchhHHHHHHHHhCCeeecccc-chhhHHHHHHHHhhhh
Confidence 44444444444434333 34443 5888889999999999999999999999886665 5678999999998877
Q ss_pred cc
Q psy5911 1025 GV 1026 (1242)
Q Consensus 1025 ~~ 1026 (1242)
|.
T Consensus 452 G~ 453 (499)
T COG0554 452 GF 453 (499)
T ss_pred Cc
Confidence 63
No 225
>PRK03011 butyrate kinase; Provisional
Probab=80.69 E-value=15 Score=42.56 Aligned_cols=45 Identities=27% Similarity=0.249 Sum_probs=36.3
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhc----ccccccCCcchhhhhhHHH
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFE----KEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~----~~v~~~~~p~~aVa~GAa~ 1018 (1242)
++|.|+|.||.+..+.+++.|++.+. ..+....+-.+|.+.||+.
T Consensus 295 dpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~r 343 (358)
T PRK03011 295 KVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALR 343 (358)
T ss_pred CCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 58999999999999999998887763 3455566667899999864
No 226
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=80.51 E-value=5.7 Score=44.25 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-----cccccccCCcchhhhhhHHHhh
Q psy5911 948 SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-----EKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 948 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-----~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
++++...+.+.+.+...+.+....... |+|+||..+.+.+++.+.+.+ ..++..+..|....|.|||++|
T Consensus 197 ~Il~~a~~~la~~i~~~~~~~~~~~~~---v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 197 DILAEAADELAELIKAVLKRLGPEKEP---VVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTCCCCS---EEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCe---EEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 455555666666677777766543322 999999999977777775554 2345667889999999999986
No 227
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=79.49 E-value=2.3 Score=47.77 Aligned_cols=54 Identities=28% Similarity=0.500 Sum_probs=32.6
Q ss_pred HHHHHHHHcCCceeeeechhHHHHHHc-cCCCC-CCCcEEEEEeeCCCceEEEEEEE
Q psy5911 794 ATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVVYDLGGGTFDISVIEI 848 (1242)
Q Consensus 794 ~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV~D~GggT~dvsi~~~ 848 (1242)
.+.+.-+..|+++ .+++..+=|.+.| +.... ......+|+|+|||+|.++.++-
T Consensus 76 ~~~~i~~~tGi~i-~iIsgeeEa~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~~ 131 (285)
T PF02541_consen 76 FLDRIKKETGIDI-EIISGEEEARLSFLGVLSSLPPDKNGLVIDIGGGSTELILFEN 131 (285)
T ss_dssp HHHHHHHHHSS-E-EEE-HHHHHHHHHHHHHHHSTTTSSEEEEEEESSEEEEEEEET
T ss_pred HHHHHHHHhCCce-EEecHHHHHHHHHHHHHhhccccCCEEEEEECCCceEEEEEEC
Confidence 3445556679887 4555554444443 21111 24456788899999999999863
No 228
>PRK09698 D-allose kinase; Provisional
Probab=79.27 E-value=1.2e+02 Score=34.33 Aligned_cols=43 Identities=12% Similarity=0.092 Sum_probs=28.2
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEE
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
.|++ +.+.|+..|+|++-.........+++.+.+|.| .-.+++
T Consensus 104 ~~~p-v~v~NDa~aaa~~E~~~~~~~~~~~~~v~lgtG-IG~giv 146 (302)
T PRK09698 104 LNCP-VFFSRDVNLQLLWDVKENNLTQQLVLGAYLGTG-MGFAVW 146 (302)
T ss_pred hCCC-EEEcchHhHHHHHHHHhcCCCCceEEEEEecCc-eEEEEE
Confidence 4775 579999999988643322223457888888866 444444
No 229
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=79.23 E-value=93 Score=35.42 Aligned_cols=93 Identities=23% Similarity=0.272 Sum_probs=51.9
Q ss_pred ChHHHHHHHHHHHHHHHHhH--hCCCCCcEEEEecCCCCHHH------------HHHHHHHH-HHcCCceeeeechhHHH
Q psy5911 752 APPQISAEILKKMKSTAETF--LNEKIEKAVITVPAYFNDSQ------------RQATKDAG-KIAGLEVLRIINEPTAA 816 (1242)
Q Consensus 752 ~~~~v~a~~L~~l~~~a~~~--~~~~~~~~VitVPa~~~~~q------------r~~~~~Aa-~~AGl~~~~li~Ep~AA 816 (1242)
+++++...+...+.+..+.. ...++..+.|++|...+... .-.+++.. +..|++ +.+.|+..|+
T Consensus 32 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgva~pG~vd~~~g~~~~~~~~~w~~~~l~~~l~~~~~~p-v~v~NDa~~~ 110 (318)
T TIGR00744 32 TPETIVDAIASAVDSFIQHIAKVGHEIVAIGIGAPGPVNRQRGTVYFAVNLDWKQEPLKEKVEARVGLP-VVVENDANAA 110 (318)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCccceEEEEEeccccccCCCCEEEecCCCCCCCCCHHHHHHHHHCCC-EEEechHHHH
Confidence 35555555544444444332 11245567888887554321 11233332 344765 5799999999
Q ss_pred HHHccCCC-CCCCcEEEEEeeCCCceEEEEE
Q psy5911 817 ALAYGLDK-KPDDRIIVVYDLGGGTFDISVI 846 (1242)
Q Consensus 817 al~y~~~~-~~~~~~vlV~D~GggT~dvsi~ 846 (1242)
|++-.... ....++++++.+|.|- -.+++
T Consensus 111 alaE~~~g~~~~~~~~~~v~igtGi-G~giv 140 (318)
T TIGR00744 111 ALGEYKKGAGKGARDVICITLGTGL-GGGII 140 (318)
T ss_pred HHHHHHhcccCCCCcEEEEEeCCcc-EEEEE
Confidence 98643322 2234678888898775 55555
No 230
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=78.61 E-value=1.3 Score=49.66 Aligned_cols=67 Identities=19% Similarity=0.179 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccc-cccCCCcchhhHhHHHH
Q psy5911 309 LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE-VKKDINPDEAVAVGASV 378 (1242)
Q Consensus 309 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~-~~~~~~p~~ava~GAa~ 378 (1242)
+++-..+++.+.|+......+..+.+. .++.+||.+ |.+-..+.+.+|.+ +..+..|.-+-|.||++
T Consensus 216 i~~~~~~~m~~~i~~~~~~~g~~~~~~-~lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 216 IVRIANENMADAIREVSVERGYDPRDF-PLVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--EEEE--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccc-ccccccccc--cccccccccccccccccccccccccccccccc
Confidence 334444555555666554545544332 345556665 67777888888865 44455568888999876
No 231
>PRK10854 exopolyphosphatase; Provisional
Probab=78.34 E-value=5.9 Score=48.52 Aligned_cols=89 Identities=21% Similarity=0.268 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHc-cCCCC-CCCcEEEEE
Q psy5911 757 SAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVVY 834 (1242)
Q Consensus 757 ~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV~ 834 (1242)
.-..|+..++.+..+ +..-..+|=|--.-=-.+....+.++-+..|+++ ++++-.+=|.+.| |.... +..+..+|+
T Consensus 65 ~~~~L~~F~~~~~~~-~v~~v~~vATsAlReA~N~~~fl~~i~~~tGl~i-~vIsG~EEA~l~~~gv~~~l~~~~~~lvv 142 (513)
T PRK10854 65 GLNCLSLFAERLQGF-SPANVCIVGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVI 142 (513)
T ss_pred HHHHHHHHHHHHHhC-CCCeEEEEehHHHHcCcCHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHhhhhcccCCCCCeEEE
Confidence 344556666666543 3221122222111112233444555666779988 5555555555444 44322 123457888
Q ss_pred eeCCCceEEEEEE
Q psy5911 835 DLGGGTFDISVIE 847 (1242)
Q Consensus 835 D~GggT~dvsi~~ 847 (1242)
|+|||++.+++++
T Consensus 143 DIGGGStEl~~~~ 155 (513)
T PRK10854 143 DIGGGSTELVIGE 155 (513)
T ss_pred EeCCCeEEEEEec
Confidence 9999999999986
No 232
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=78.12 E-value=9.9 Score=46.32 Aligned_cols=56 Identities=23% Similarity=0.352 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCceeeeechhHHHHHHc-cCCCC-CCCcEEEEEeeCCCceEEEEEE
Q psy5911 791 QRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 791 qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
....+.++-+..|+++ ++|+-.+=|-+.| |.... +..+..+|+|+|||++.+++++
T Consensus 93 ~~~fl~~i~~~tGl~i-evIsG~eEA~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~ 150 (496)
T PRK11031 93 ADEFLAKAQEILGCPV-QVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGT 150 (496)
T ss_pred HHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHhhhhccCCCCCEEEEEecCCeeeEEEec
Confidence 3455666667789998 5555554444444 43322 1223578889999999999986
No 233
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=78.11 E-value=19 Score=40.68 Aligned_cols=52 Identities=31% Similarity=0.483 Sum_probs=37.9
Q ss_pred CCcceEEEecCccChHHHHHHHHHhccc----ccccCCCc----chhhHhHHHHhhhhhcC
Q psy5911 333 SKISEIILVGGQTRMPLVQKMVSEFFEK----EVKKDINP----DEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 333 ~~i~~ViLvGG~s~ip~v~~~l~~~f~~----~~~~~~~p----~~ava~GAa~~a~~l~~ 385 (1242)
.+++.|+|.|-.+++|-+.+.+++.|+. ++. ...+ -...|.|||+.|.-+.|
T Consensus 259 ~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v~-~l~~~~~~aKeaA~GaAiIA~glaG 318 (343)
T PF07318_consen 259 PDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKVR-KLEGLARKAKEAAQGAAIIANGLAG 318 (343)
T ss_pred CCCCEEEEeccccccHHHHHHHHHHHHhhccccee-ecccccccchhhhhhHHHHhhhhhc
Confidence 4678999999999999988888777732 222 2222 24589999999877766
No 234
>PRK00976 hypothetical protein; Provisional
Probab=76.13 E-value=13 Score=41.66 Aligned_cols=58 Identities=22% Similarity=0.295 Sum_probs=44.0
Q ss_pred CcceEEEecCcCchH--HHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEe
Q psy5911 974 KISEIILVGGQTRMP--LVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLL 1033 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip--~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~ 1033 (1242)
+++.|+|-||-|+.+ .+.+.+++.+... ...-..++.++|||+.|..+.+..++++-+
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~~~--~a~LG~dAGaiGAA~iA~~i~~G~~~ilgi 322 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLDKK--VLVLGKESAAIGLALIARDIFNGKKDILGI 322 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhccc--ccccCCchHHHHHHHHHHHHhCCCceeeee
Confidence 478999999999998 7888888888543 233345899999999998776666665433
No 235
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=76.10 E-value=7.6 Score=45.32 Aligned_cols=75 Identities=20% Similarity=0.340 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHH----HcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhh
Q psy5911 308 SLVEDLISKSLKPCEVALN----DAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 308 ~l~~~~~~~i~~~i~~~l~----~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l 383 (1242)
.+++..++.+.-..+++++ +++. .+..+-+=||.|+..++.+...+.+|.++.++.+ .|..|+|||+.|+.-
T Consensus 375 hi~RA~LEsiayQ~~dv~~aM~~d~~~---~~~~LrvDGG~s~n~~lmQfqADilg~~V~Rp~~-~EtTAlGaA~lAGla 450 (499)
T COG0554 375 HIARATLESIAYQTRDVLEAMEKDSGI---KLTRLRVDGGASRNNFLMQFQADILGVPVERPVV-LETTALGAAYLAGLA 450 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeEEEcCccccchhHHHHHHHHhCCeeecccc-chhhHHHHHHHHhhh
Confidence 3455555555544444444 4443 5888889999999999999999999999887665 467899999999887
Q ss_pred cCC
Q psy5911 384 SGV 386 (1242)
Q Consensus 384 ~~~ 386 (1242)
.|.
T Consensus 451 ~G~ 453 (499)
T COG0554 451 VGF 453 (499)
T ss_pred hCc
Confidence 763
No 236
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=75.71 E-value=1.5 Score=49.35 Aligned_cols=65 Identities=18% Similarity=0.133 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhccc-ccccCCcchhhhhhHHH
Q psy5911 951 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE-VKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 951 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~-v~~~~~p~~aVa~GAa~ 1018 (1242)
+-...++.+.|++.....+..+.+ -.++.+||.+ |++...+.+.+|.+ +..+..+.-+-|.||++
T Consensus 218 ~~~~~~m~~~i~~~~~~~g~~~~~-~~lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 218 RIANENMADAIREVSVERGYDPRD-FPLVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHT--EEE-E-------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhhCCCccc-cccccccccc--cccccccccccccccccccccccccccccccc
Confidence 334445555555554444544432 2345556655 77778888888865 45555578889999976
No 237
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=75.50 E-value=5.1 Score=45.05 Aligned_cols=107 Identities=22% Similarity=0.388 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhHhcCCCCcEE-EEecCCCC-HHHHHHHHHHHHHcCCCeeeeechHHHHHHHh-ccCCC-CCCcEEEE
Q psy5911 118 AEILKKMKSTAETFLNEKIEKAV-ITVPAYFN-DSQRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVV 193 (1242)
Q Consensus 118 a~~L~~l~~~a~~~~~~~~~~~v-itVPa~f~-~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV 193 (1242)
...|+.+++.+..+ .+.++. ++--|-=. .+....+.+.-+..|+++ .+|+..+=|.+.| +.... ......+|
T Consensus 41 ~~~L~~f~~~~~~~---~v~~i~~vATsA~R~A~N~~~~~~~i~~~tGi~i-~iIsgeeEa~l~~~gv~~~l~~~~~~lv 116 (285)
T PF02541_consen 41 IDALKRFKEILKDY---GVEKIRAVATSALREAKNSDEFLDRIKKETGIDI-EIISGEEEARLSFLGVLSSLPPDKNGLV 116 (285)
T ss_dssp HHHHHHHHHHHHHT---TGSEEEEEEEHHHHHSTTHHHHHHHHHHHHSS-E-EEE-HHHHHHHHHHHHHHHSTTTSSEEE
T ss_pred HHHHHHHHHHHHHC---CCCEEEEEhhHHHHhCcCHHHHHHHHHHHhCCce-EEecHHHHHHHHHHHHHhhccccCCEEE
Confidence 34555555555543 334432 22211111 222333444456679876 5566555555444 21111 24556788
Q ss_pred EEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHH
Q psy5911 194 YDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 237 (1242)
Q Consensus 194 ~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l 237 (1242)
+|+|||++.++.++-.. +.- ...-.+|.-.+.+.+
T Consensus 117 iDIGGGStEl~~~~~~~------~~~---~~Sl~lG~vrl~e~~ 151 (285)
T PF02541_consen 117 IDIGGGSTELILFENGK------VVF---SQSLPLGAVRLTERF 151 (285)
T ss_dssp EEEESSEEEEEEEETTE------EEE---EEEES--HHHHHHHH
T ss_pred EEECCCceEEEEEECCe------eeE---eeeeehHHHHHHHHH
Confidence 89999999999885321 111 112346887766554
No 238
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=75.03 E-value=30 Score=37.42 Aligned_cols=48 Identities=27% Similarity=0.281 Sum_probs=36.9
Q ss_pred CCcCCcceEEEecCccChHHHHHHHHHhcc----cccccCCCcchhhHhHHH
Q psy5911 330 IDKSKISEIILVGGQTRMPLVQKMVSEFFE----KEVKKDINPDEAVAVGAS 377 (1242)
Q Consensus 330 ~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~----~~~~~~~~p~~ava~GAa 377 (1242)
.-+..+|.|+|+||.++...+-++|.++.. .-+.-..+-.+|.|.||.
T Consensus 292 vL~G~vDaIvLTGGiA~~~~f~~~I~~~v~~iapv~v~PGE~EleALA~G~l 343 (358)
T COG3426 292 VLKGKVDAIVLTGGIAYEKLFVDAIEDRVSWIAPVIVYPGEDELEALAEGAL 343 (358)
T ss_pred hcCCCCCEEEEecchhhHHHHHHHHHHHHhhhcceEecCCchHHHHHHhhhH
Confidence 335679999999999999999999988763 233444566788999984
No 239
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional
Probab=74.80 E-value=42 Score=42.54 Aligned_cols=20 Identities=35% Similarity=0.567 Sum_probs=17.5
Q ss_pred HHcCCCeeeeechHHHHHHH
Q psy5911 160 KIAGLEVLRIINEPTAAALA 179 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~ 179 (1242)
+..|++++.++|+-.|+|++
T Consensus 103 ~~~g~~~v~l~ND~~aaA~g 122 (638)
T PRK14101 103 RALGFDTLLVVNDFTALAMA 122 (638)
T ss_pred HHcCCCeEEEEchHHHHHcC
Confidence 34688889999999999998
No 240
>PRK00976 hypothetical protein; Provisional
Probab=74.30 E-value=18 Score=40.74 Aligned_cols=59 Identities=22% Similarity=0.305 Sum_probs=44.3
Q ss_pred CcceEEEecCccChH--HHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEe
Q psy5911 334 KISEIILVGGQTRMP--LVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLD 394 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip--~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d 394 (1242)
+++.|+|-||-|+.+ .+.+.+++.+... ...-...+.++|||+.|..+.+..++++-++
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~~~--~a~LG~dAGaiGAA~iA~~i~~G~~~ilgi~ 323 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLDKK--VLVLGKESAAIGLALIARDIFNGKKDILGIE 323 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhccc--ccccCCchHHHHHHHHHHHHhCCCceeeeeE
Confidence 478899999999998 7888888887543 2333458999999999887776666654433
No 241
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=73.49 E-value=9.3 Score=43.26 Aligned_cols=89 Identities=24% Similarity=0.300 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHc-cCCCCCCCcEEEEEe
Q psy5911 757 SAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKKPDDRIIVVYD 835 (1242)
Q Consensus 757 ~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~vlV~D 835 (1242)
+...|+..++.+..+ +..-..+|-|--.--..+....+...-...|+++ ++++..+=|.+.| +..........+++|
T Consensus 54 ~~~~l~~f~~~~~~~-~v~~i~~vaTsa~R~A~N~~~~~~~i~~~tgi~i-~visg~eEa~l~~~gv~~~~~~~~~~v~D 131 (300)
T TIGR03706 54 ALEALKRFAELLRGF-PVDEVRAVATAALRDAKNGPEFLREAEAILGLPI-EVISGEEEARLIYLGVAHTLPIADGLVVD 131 (300)
T ss_pred HHHHHHHHHHHHHhC-CCCeEEEEEcHHHHcCCCHHHHHHHHHHHHCCCe-EEeChHHHHHHHHHHHHhCCCCCCcEEEE
Confidence 334556666666543 3221122322222222233334444456679887 5777766666655 222211112238889
Q ss_pred eCCCceEEEEEE
Q psy5911 836 LGGGTFDISVIE 847 (1242)
Q Consensus 836 ~GggT~dvsi~~ 847 (1242)
+|||++.++.+.
T Consensus 132 iGGGSte~~~~~ 143 (300)
T TIGR03706 132 IGGGSTELILGK 143 (300)
T ss_pred ecCCeEEEEEec
Confidence 999999999875
No 242
>PRK14878 UGMP family protein; Provisional
Probab=73.34 E-value=1.7e+02 Score=33.36 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=26.3
Q ss_pred CcceEEEecCccChHHHHHHHHHhc---ccccccCC
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI 366 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~ 366 (1242)
.+..|+|+||.+.-.++++.+.+.+ +.++..+.
T Consensus 241 g~~~vvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~ 276 (323)
T PRK14878 241 GKKEVLLVGGVAANRRLREKLEIMAEDRGAKFYVVP 276 (323)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCC
Confidence 3678999999999999999999876 55554433
No 243
>PLN02666 5-oxoprolinase
Probab=72.80 E-value=20 Score=48.26 Aligned_cols=76 Identities=9% Similarity=0.041 Sum_probs=49.3
Q ss_pred EEcHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhccc-ccccCCcchhhhhhHH
Q psy5911 940 KITRSKLESLVEDLIS-KSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE-VKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 940 ~itr~~fe~~~~~~~~-~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~-v~~~~~p~~aVa~GAa 1017 (1242)
.++-++...-+..+.+ ...+.|+.+....+.++.+. .++..||+ =|...-.|.+.+|.+ +..+.+|.-..|+|++
T Consensus 453 g~~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~~-~l~afGGa--gp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~ 529 (1275)
T PLN02666 453 DMSVEEVALGFVRVANEAMCRPIRQLTEMKGYETANH-ALACFGGA--GPQHACAIARALGMSEVFVHRYCGILSAYGMG 529 (1275)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCc-eEEEecCc--HHHHHHHHHHHcCCCEEEeCCCccHHHHHHHH
Confidence 3455565555555544 34456666666666655322 23334443 477778899999976 7788899999999997
Q ss_pred H
Q psy5911 1018 V 1018 (1242)
Q Consensus 1018 ~ 1018 (1242)
+
T Consensus 530 ~ 530 (1275)
T PLN02666 530 L 530 (1275)
T ss_pred h
Confidence 5
No 244
>COG5026 Hexokinase [Carbohydrate transport and metabolism]
Probab=72.61 E-value=9.1 Score=44.01 Aligned_cols=19 Identities=37% Similarity=0.527 Sum_probs=17.1
Q ss_pred CeEEEEEcCccceEEEEEE
Q psy5911 3 CKIIGIDLGTTNSCVAVLN 21 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~ 21 (1242)
..++.||||.||-.+|...
T Consensus 75 g~~LaiD~GGTnlRvc~V~ 93 (466)
T COG5026 75 GSVLAIDLGGTNLRVCLVV 93 (466)
T ss_pred CCEEEEecCCceEEEEEEE
Confidence 4689999999999999885
No 245
>KOG1385|consensus
Probab=70.93 E-value=13 Score=42.46 Aligned_cols=77 Identities=22% Similarity=0.333 Sum_probs=45.9
Q ss_pred CeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHH--HHHhccCCC
Q psy5911 108 DKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAA--ALAYGLDKK 185 (1242)
Q Consensus 108 ~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AA--al~y~~~~~ 185 (1242)
|-...|.+-+..+|+.+++..+....-++..-.|+|=.. .+|-.-| .+.|....-
T Consensus 151 GLRlL~~~ka~~IL~aVre~l~~~s~f~v~~d~VsIm~G-----------------------tdEGv~aWiTiN~Llg~L 207 (453)
T KOG1385|consen 151 GLRLLPGSKADNILQAVRELLKNDSPFPVVEDAVSIMDG-----------------------TDEGVYAWITINYLLGTL 207 (453)
T ss_pred ccccCChhHHHHHHHHHHHHHhccCCccccCCceeeccC-----------------------cccceeeeeehhhhhccc
Confidence 567888999999999999998743333322222222111 1111111 123433322
Q ss_pred --CCCcEEEEEEeCCcceeeeEEE
Q psy5911 186 --PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 186 --~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
+..+++.|+|+|||++.++..-
T Consensus 208 ~~~~~~tvgv~DLGGGSTQi~f~p 231 (453)
T KOG1385|consen 208 GAPGHRTVGVVDLGGGSTQITFLP 231 (453)
T ss_pred CCCCCCceEEEEcCCceEEEEEec
Confidence 2367899999999999999764
No 246
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=69.97 E-value=89 Score=36.31 Aligned_cols=82 Identities=17% Similarity=0.136 Sum_probs=55.8
Q ss_pred EEEcHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCccCcce-EEEecCcCchHHHHHHHHhhhcc-cccc-cCCcchhhhh
Q psy5911 939 VKITRSKLESLVEDLISKSL-KPCEVALNDAKIDKSKISE-IILVGGQTRMPLVQKMVSEFFEK-EVKK-DINPDEAVAV 1014 (1242)
Q Consensus 939 ~~itr~~fe~~~~~~~~~~~-~~i~~~l~~~~~~~~~i~~-ViLvGG~s~ip~v~~~l~~~f~~-~v~~-~~~p~~aVa~ 1014 (1242)
..-.+.++-..++..+++++ ..++..+++.+ ++. +.|.||.+..-..-..|.+..+. .+.. +.--|..+|+
T Consensus 131 ~~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~ai 205 (360)
T PF02543_consen 131 LTQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAI 205 (360)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHH
Confidence 34567777777777777654 55666777665 455 99999999888888888877543 3443 4455788999
Q ss_pred hHHHhhhhhcc
Q psy5911 1015 GASVQAGVLSG 1025 (1242)
Q Consensus 1015 GAa~~a~~l~~ 1025 (1242)
|||+++....+
T Consensus 206 GaA~~~~~~~~ 216 (360)
T PF02543_consen 206 GAALYAWHELG 216 (360)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999875443
No 247
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=69.53 E-value=81 Score=36.62 Aligned_cols=82 Identities=18% Similarity=0.138 Sum_probs=54.9
Q ss_pred EEEcHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCcCCcce-EEEecCccChHHHHHHHHHhccc-ccccCC-CcchhhHh
Q psy5911 299 VKITRSKLESLVEDLISKS-LKPCEVALNDAKIDKSKISE-IILVGGQTRMPLVQKMVSEFFEK-EVKKDI-NPDEAVAV 374 (1242)
Q Consensus 299 ~~itr~~fe~l~~~~~~~i-~~~i~~~l~~~~~~~~~i~~-ViLvGG~s~ip~v~~~l~~~f~~-~~~~~~-~p~~ava~ 374 (1242)
..-.+.++-..++..++++ ...++..++..+ ++. +.|.||...--..-..|.+..+. ++..++ --|.-+|.
T Consensus 131 ~~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~ai 205 (360)
T PF02543_consen 131 LTQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAI 205 (360)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHH
Confidence 3456777877778877765 456667777666 455 99999999887777777776532 354444 45888999
Q ss_pred HHHHhhhhhcC
Q psy5911 375 GASVQAGVLSG 385 (1242)
Q Consensus 375 GAa~~a~~l~~ 385 (1242)
|||+++....+
T Consensus 206 GaA~~~~~~~~ 216 (360)
T PF02543_consen 206 GAALYAWHELG 216 (360)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999875443
No 248
>PRK09604 UGMP family protein; Validated
Probab=69.26 E-value=2.2e+02 Score=32.75 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=36.3
Q ss_pred CcceEEEecCcCchHHHHHHHHhhh---cccccccC---CcchhhhhhHHHhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQA 1020 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~---~p~~aVa~GAa~~a 1020 (1242)
.++.|+|+||.+...++++.|.+.+ +.++..+. --|.+++.|+|=+-
T Consensus 254 ~~~~lvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~p~~D~gisIg~ag~~ 306 (332)
T PRK09604 254 GVKTLVVAGGVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYE 306 (332)
T ss_pred CCCeEEEcChHHHHHHHHHHHHHHHHHCCCEEECCCCCCCcHHHHHHHHHHHH
Confidence 4778999999999999999999887 44554433 34778888887443
No 249
>PLN02666 5-oxoprolinase
Probab=68.34 E-value=68 Score=43.54 Aligned_cols=75 Identities=9% Similarity=0.036 Sum_probs=49.0
Q ss_pred EcHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccc-cccCCCcchhhHhHHHH
Q psy5911 301 ITRSKLESLVEDLI-SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE-VKKDINPDEAVAVGASV 378 (1242)
Q Consensus 301 itr~~fe~l~~~~~-~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~-~~~~~~p~~ava~GAa~ 378 (1242)
++-++...-+..++ +...+.|+.+....+.++.+. .++..||+ =|..--.|.+.+|.+ +..+.+|.-..|+|+++
T Consensus 454 ~~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~~-~l~afGGa--gp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~~ 530 (1275)
T PLN02666 454 MSVEEVALGFVRVANEAMCRPIRQLTEMKGYETANH-ALACFGGA--GPQHACAIARALGMSEVFVHRYCGILSAYGMGL 530 (1275)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCc-eEEEecCc--HHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 44555554444433 445566777777767655432 23334444 377778889999977 77888999999999975
No 250
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=67.82 E-value=19 Score=41.53 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcc-cccc----cCCcchhhhhhHHHhhh
Q psy5911 947 ESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK-EVKK----DINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 947 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~v~~----~~~p~~aVa~GAa~~a~ 1021 (1242)
++++..+.+-+...|.+.++.... +++.|+++||+++.|.+.+.|++.++. ++.. .++|+.-=|.+-|++|.
T Consensus 260 ~D~~aTlt~~TA~sI~~~i~~~~~---~~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aFA~La~ 336 (364)
T PF03702_consen 260 EDILATLTEFTAQSIADAIRRFPP---QPDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAFAWLAY 336 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-T---T-EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---CCceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHHHHHHH
Confidence 334445555555566666665542 378999999999999999999999954 4432 34444444444556664
Q ss_pred h
Q psy5911 1022 V 1022 (1242)
Q Consensus 1022 ~ 1022 (1242)
.
T Consensus 337 ~ 337 (364)
T PF03702_consen 337 R 337 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 251
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=66.79 E-value=2.3e+02 Score=32.15 Aligned_cols=92 Identities=23% Similarity=0.272 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHHhH--hcCCCCcEEEEecCCCCHHH------------HHHHHHHH-HHcCCCeeeeechHHHHH
Q psy5911 113 PPQISAEILKKMKSTAETF--LNEKIEKAVITVPAYFNDSQ------------RQATKDAG-KIAGLEVLRIINEPTAAA 177 (1242)
Q Consensus 113 ~~~v~a~~L~~l~~~a~~~--~~~~~~~~vitVPa~f~~~q------------r~~~~~Aa-~~AGl~~~~li~Ep~AAa 177 (1242)
++++...+.+.+.+..++. ...++..+.|++|...+... ...+.+.. +..|++ +.+.|+..|+|
T Consensus 33 ~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgva~pG~vd~~~g~~~~~~~~~w~~~~l~~~l~~~~~~p-v~v~NDa~~~a 111 (318)
T TIGR00744 33 PETIVDAIASAVDSFIQHIAKVGHEIVAIGIGAPGPVNRQRGTVYFAVNLDWKQEPLKEKVEARVGLP-VVVENDANAAA 111 (318)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccceEEEEEeccccccCCCCEEEecCCCCCCCCCHHHHHHHHHCCC-EEEechHHHHH
Confidence 3444444444444433322 11245667888887554211 11233322 344775 57999999999
Q ss_pred HHhccCC-CCCCcEEEEEEeCCcceeeeEE
Q psy5911 178 LAYGLDK-KPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 178 l~y~~~~-~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
++-.... ....++++++.+|.|- -.+++
T Consensus 112 laE~~~g~~~~~~~~~~v~igtGi-G~giv 140 (318)
T TIGR00744 112 LGEYKKGAGKGARDVICITLGTGL-GGGII 140 (318)
T ss_pred HHHHHhcccCCCCcEEEEEeCCcc-EEEEE
Confidence 8653322 2245678888899875 55555
No 252
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=66.66 E-value=5.6 Score=49.69 Aligned_cols=42 Identities=24% Similarity=0.394 Sum_probs=30.0
Q ss_pred CeeeeechHHHHHHHhccC-CCCCCcEEEEEEeCCcceeeeEEE
Q psy5911 165 EVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 165 ~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
++..+.+-|.|..+....- -...+ +++++|+||.|+|++++.
T Consensus 254 pv~tI~SGPAagvvGAa~ltg~~~g-~~i~~DmGGTStDva~i~ 296 (674)
T COG0145 254 PVETILSGPAAGVVGAAYLTGLKAG-NAIVFDMGGTSTDVALII 296 (674)
T ss_pred CeeeEeeccHHHHHHHHHhcccccC-CEEEEEcCCcceeeeeee
Confidence 4445777888877665443 22222 699999999999999987
No 253
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.93 E-value=5.9 Score=49.50 Aligned_cols=48 Identities=21% Similarity=0.318 Sum_probs=35.0
Q ss_pred HHHcCCceeeeechhHHHHHHccCC-CCCCCcEEEEEeeCCCceEEEEEE
Q psy5911 799 GKIAGLEVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 799 a~~AGl~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
-+.-+.++..+.+=|.|..++...- ....+ +++++|+||.|||++++.
T Consensus 248 ~~a~~~pv~tI~SGPAagvvGAa~ltg~~~g-~~i~~DmGGTStDva~i~ 296 (674)
T COG0145 248 EEAREKPVETILSGPAAGVVGAAYLTGLKAG-NAIVFDMGGTSTDVALII 296 (674)
T ss_pred HHHhcCCeeeEeeccHHHHHHHHHhcccccC-CEEEEEcCCcceeeeeee
Confidence 3444667778889998877765443 21122 699999999999999987
No 254
>PRK00292 glk glucokinase; Provisional
Probab=63.85 E-value=36 Score=38.84 Aligned_cols=46 Identities=30% Similarity=0.300 Sum_probs=30.0
Q ss_pred HHcCCCeeeeechHHHHHHHhccC---------CCC--CCcEEEEEEeCCcceeeeEE
Q psy5911 160 KIAGLEVLRIINEPTAAALAYGLD---------KKP--DDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 160 ~~AGl~~~~li~Ep~AAal~y~~~---------~~~--~~~~vlV~D~GggT~Dvsv~ 206 (1242)
+..|++.+.+.|+-.|+|++-... ... ....++++-+|.| +-.+++
T Consensus 88 ~~~~~p~v~l~ND~~aaalgE~~~~~~~~~~~g~~~~~~~~~~~~v~~GTG-iG~giv 144 (316)
T PRK00292 88 QELGLDHLLLINDFTAQALAIPRLGEEDLVQIGGGEPVPGAPIAVIGPGTG-LGVAGL 144 (316)
T ss_pred HHhCCCeEEEEecHHHHHcccccCCHhheeEeCCCCCCCCCcEEEEEcCCc-ceEEEE
Confidence 345887789999999999985321 111 1356787788866 344444
No 255
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=62.90 E-value=20 Score=40.54 Aligned_cols=52 Identities=31% Similarity=0.483 Sum_probs=38.3
Q ss_pred cCcceEEEecCcCchHHHHHHHHhhhcc----cccccCCc----chhhhhhHHHhhhhhcc
Q psy5911 973 SKISEIILVGGQTRMPLVQKMVSEFFEK----EVKKDINP----DEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 973 ~~i~~ViLvGG~s~ip~v~~~l~~~f~~----~v~~~~~p----~~aVa~GAa~~a~~l~~ 1025 (1242)
.+++.|+|+|-.+++|-+.+.+++.|+. ++. .+.+ -...|.|||+.|.-+.|
T Consensus 259 ~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v~-~l~~~~~~aKeaA~GaAiIA~glaG 318 (343)
T PF07318_consen 259 PDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKVR-KLEGLARKAKEAAQGAAIIANGLAG 318 (343)
T ss_pred CCCCEEEEeccccccHHHHHHHHHHHHhhccccee-ecccccccchhhhhhHHHHhhhhhc
Confidence 4688999999999999998888877743 222 2222 23489999999877665
No 256
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=62.15 E-value=28 Score=38.35 Aligned_cols=72 Identities=21% Similarity=0.190 Sum_probs=41.0
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCceeee---echhHHHHHHccCCC--CCCCcEEEEEeeCCCceEEEEEEEee
Q psy5911 779 AVITVPAYFNDSQRQATKDAGKIAGLEVLRI---INEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIEIAN 850 (1242)
Q Consensus 779 ~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~l---i~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~dvsi~~~~~ 850 (1242)
+.||=-..-..+.|..+-.-...||==++.- -.|+.-|.-..+... .+....++-+|+||||+..|++.-.+
T Consensus 90 vIITGEtArk~NA~~vl~alSg~aGDFVVAtAGPdLESiIAGkGaGA~t~Seqr~t~v~NlDIGGGTtN~slFD~Gk 166 (473)
T COG4819 90 VIITGETARKRNARPVLMALSGSAGDFVVATAGPDLESIIAGKGAGAQTLSEQRLTRVLNLDIGGGTTNYSLFDAGK 166 (473)
T ss_pred EEEeccccccccchHHHHHhhhcccceEEEecCCCHHHHhccCCccccchhhhhceEEEEEeccCCccceeeecccc
Confidence 5556555556666666655555555222211 124444433333221 12456688899999999999997544
No 257
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=61.47 E-value=32 Score=39.72 Aligned_cols=69 Identities=19% Similarity=0.236 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccc----cCCcchhhhhhHHHhhh
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK----DINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~----~~~p~~aVa~GAa~~a~ 1021 (1242)
+.-+..-+...|.+.+.... ...+.|+++||+++.|.+.++|++.++.++.. ..+++.-=|..-|++|.
T Consensus 265 ~aTlt~~TA~sI~~~~~~~~---~~~~~vlv~GGGa~N~~Lm~~L~~~l~~~v~~~~~~G~~~da~EA~aFA~La~ 337 (365)
T PRK09585 265 QATLTELTAASIARAVRRLP---PGPDELLVCGGGARNPTLMERLAALLPTEVATTDALGIDGDAKEALAFAWLAV 337 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcc---CCCCEEEEECCCcchHHHHHHHHHhcCCcccCHHHcCCChhHHHHHHHHHHHH
Confidence 33344444555555655432 23568999999999999999999998633321 24455444555566664
No 258
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=60.55 E-value=3e+02 Score=31.32 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=34.0
Q ss_pred CcceEEEecCccChHHHHHHHHHhc---ccccccCC---CcchhhHhHHH
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGAS 377 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~---~p~~ava~GAa 377 (1242)
.++.|+|.||.+.-.++++.|.+.. +.++..+. --|.+++.|+|
T Consensus 259 ~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~a 308 (314)
T TIGR03723 259 GLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAA 308 (314)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHH
Confidence 4678999999999999999999887 55544433 24778888875
No 259
>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the N-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3G25_D 3GE1_D 2NLX_A 2ITM_A 2ZF5_Y 3L0Q_B 3GG4_B 3I8B_A 3H3O_C 3FLC_X ....
Probab=59.38 E-value=8.8 Score=41.98 Aligned_cols=19 Identities=32% Similarity=0.595 Sum_probs=17.1
Q ss_pred eEEEEEcCccceEEEEEEC
Q psy5911 4 KIIGIDLGTTNSCVAVLNN 22 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~ 22 (1242)
+++|||+|||++++++++.
T Consensus 1 y~lgiDiGTts~K~~l~d~ 19 (245)
T PF00370_consen 1 YYLGIDIGTTSVKAVLFDE 19 (245)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred CEEEEEEcccceEEEEEeC
Confidence 5899999999999999873
No 260
>KOG1385|consensus
Probab=55.27 E-value=23 Score=40.54 Aligned_cols=77 Identities=21% Similarity=0.312 Sum_probs=45.7
Q ss_pred CeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHH--HHHccCCCC
Q psy5911 748 DQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAA--ALAYGLDKK 825 (1242)
Q Consensus 748 ~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AA--al~y~~~~~ 825 (1242)
|-.+.|.+-+..+|..+++..+....-++..-.++| +.-.+|-.-| .+.|....-
T Consensus 151 GLRlL~~~ka~~IL~aVre~l~~~s~f~v~~d~VsI-----------------------m~GtdEGv~aWiTiN~Llg~L 207 (453)
T KOG1385|consen 151 GLRLLPGSKADNILQAVRELLKNDSPFPVVEDAVSI-----------------------MDGTDEGVYAWITINYLLGTL 207 (453)
T ss_pred ccccCChhHHHHHHHHHHHHHhccCCccccCCceee-----------------------ccCcccceeeeeehhhhhccc
Confidence 567889999999999999988743222222111222 1111222211 123433222
Q ss_pred --CCCcEEEEEeeCCCceEEEEEE
Q psy5911 826 --PDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 826 --~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
+....+.|+|+|||+|.++..-
T Consensus 208 ~~~~~~tvgv~DLGGGSTQi~f~p 231 (453)
T KOG1385|consen 208 GAPGHRTVGVVDLGGGSTQITFLP 231 (453)
T ss_pred CCCCCCceEEEEcCCceEEEEEec
Confidence 2357799999999999999875
No 261
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=55.08 E-value=45 Score=38.53 Aligned_cols=67 Identities=21% Similarity=0.237 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccc-ccc------cCCCcchhhHhHHHHhhh
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK-EVK------KDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~~~------~~~~p~~ava~GAa~~a~ 381 (1242)
+.-+.+=+...|.+.++... .+++.|+++||+++-|.+.+.|++.++. ++. .+.+..||++. |++|.
T Consensus 263 ~aTlt~~TA~sI~~~i~~~~---~~~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aF--A~La~ 336 (364)
T PF03702_consen 263 LATLTEFTAQSIADAIRRFP---PQPDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAF--AWLAY 336 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHH----TT-EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCCceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHH--HHHHH
Confidence 33333334444445555443 2378999999999999999999999954 443 22344555555 45544
No 262
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed
Probab=53.09 E-value=1.4e+02 Score=35.11 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhh
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 998 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 998 (1242)
++-++.++.+.|-...... ...+|.|+++||-+ ..+.+++.|.+.+
T Consensus 302 ~d~f~yri~k~Iga~~a~L---~g~vDaiVfTGGIgE~s~~lr~~I~~~l 348 (402)
T PRK00180 302 LDVFVYRLAKYIGSYAAAL---NGRLDAIVFTAGIGENSALVREKVLEGL 348 (402)
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCCEEEEcCccccCCHHHHHHHHhhh
Confidence 3344445555554444433 12599999999999 9999999998766
No 263
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=52.22 E-value=42 Score=27.44 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=30.9
Q ss_pred HHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCce
Q psy5911 767 TAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEV 806 (1242)
Q Consensus 767 ~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~ 806 (1242)
..+.+.... ...++.|+.++..+|..+.+.|...||..
T Consensus 7 ~i~~F~~~~--~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s 44 (59)
T cd06007 7 ALEDFRASD--NEEYEFPSSLTNHERAVIHRLCRKLGLKS 44 (59)
T ss_pred HHHHHHcCc--ccEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 344444433 67889999999999999999999999875
No 264
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=51.10 E-value=34 Score=43.44 Aligned_cols=48 Identities=19% Similarity=0.322 Sum_probs=37.8
Q ss_pred CcceEEEecCccChHHHHHHHHHhcc---cccccCC---CcchhhHhHHHHhhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFE---KEVKKDI---NPDEAVAVGASVQAG 381 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~---~~~~~~~---~p~~ava~GAa~~a~ 381 (1242)
.++.|+|+||.++..++++.+.+.++ .++..+. --|.+++.|.|++|+
T Consensus 658 g~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a~ 711 (711)
T TIGR00143 658 GIHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAAA 711 (711)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHhC
Confidence 47789999999999999999988773 4444332 347899999988774
No 265
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=50.87 E-value=45 Score=27.25 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=30.2
Q ss_pred HHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCe
Q psy5911 128 AETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEV 166 (1242)
Q Consensus 128 a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~ 166 (1242)
.+++.... ...++-|+.++..+|..+.+.|+..||..
T Consensus 8 i~~F~~~~--~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s 44 (59)
T cd06007 8 LEDFRASD--NEEYEFPSSLTNHERAVIHRLCRKLGLKS 44 (59)
T ss_pred HHHHHcCc--ccEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 34444433 67899999999999999999999999965
No 266
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=50.85 E-value=34 Score=43.52 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc---cccccc---CCcchhhhhhHHHhhh
Q psy5911 955 SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE---KEVKKD---INPDEAVAVGASVQAG 1021 (1242)
Q Consensus 955 ~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~---~~v~~~---~~p~~aVa~GAa~~a~ 1021 (1242)
+.+.+.+.++.... .++.|+|+||.++...+++.+.+.++ .++..+ .--|.+++.|.|++|+
T Consensus 644 ~~L~~~a~~~~~~~-----g~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a~ 711 (711)
T TIGR00143 644 SGLVEIATAIAVPF-----GIHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAAA 711 (711)
T ss_pred HHHHHHHHHHHHHc-----CCCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHhC
Confidence 33445555554433 36789999999999999999988774 344433 2457899999988774
No 267
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=49.83 E-value=97 Score=35.33 Aligned_cols=51 Identities=20% Similarity=0.273 Sum_probs=39.5
Q ss_pred ccCcceEEEecCcCchHHHHHHHHhhh-ccccc----ccCCcchhhhhhHHHhhhh
Q psy5911 972 KSKISEIILVGGQTRMPLVQKMVSEFF-EKEVK----KDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 972 ~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~----~~~~p~~aVa~GAa~~a~~ 1022 (1242)
..+.+..+++||+.+.|++++.|...+ |..|. ..++++..=|.+-|+.|..
T Consensus 288 ~~~p~~l~vcGGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r 343 (371)
T COG2377 288 QGDPRRLVVCGGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWR 343 (371)
T ss_pred cCCCceeEeecCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHH
Confidence 456889999999999999999999999 54443 2567777667777777654
No 268
>smart00732 YqgFc Likely ribonuclease with RNase H fold. YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions.
Probab=49.65 E-value=14 Score=33.69 Aligned_cols=18 Identities=33% Similarity=0.680 Sum_probs=16.3
Q ss_pred eEEEEEcCccceEEEEEE
Q psy5911 4 KIIGIDLGTTNSCVAVLN 21 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~ 21 (1242)
.++|||+|.|++.+|+.+
T Consensus 2 ~ilgiD~Ggt~i~~a~~d 19 (99)
T smart00732 2 RVLGLDPGRKGIGVAVVD 19 (99)
T ss_pred cEEEEccCCCeEEEEEEC
Confidence 479999999999999985
No 269
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=49.59 E-value=71 Score=36.95 Aligned_cols=61 Identities=20% Similarity=0.258 Sum_probs=37.2
Q ss_pred HHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccccccc----CCCcchhhHhHHHHhhh
Q psy5911 318 LKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK----DINPDEAVAVGASVQAG 381 (1242)
Q Consensus 318 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~----~~~p~~ava~GAa~~a~ 381 (1242)
...|.+.+.... ...+.|+++||+++-|.+.++|++.++.++.. ..+|+.-=|..-|++|.
T Consensus 273 A~sI~~~~~~~~---~~~~~vlv~GGGa~N~~Lm~~L~~~l~~~v~~~~~~G~~~da~EA~aFA~La~ 337 (365)
T PRK09585 273 AASIARAVRRLP---PGPDELLVCGGGARNPTLMERLAALLPTEVATTDALGIDGDAKEALAFAWLAV 337 (365)
T ss_pred HHHHHHHHHhcc---CCCCEEEEECCCcchHHHHHHHHHhcCCcccCHHHcCCChhHHHHHHHHHHHH
Confidence 334444444332 22568999999999999999999998633321 23444333333455553
No 270
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=49.32 E-value=1.5e+02 Score=33.86 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=38.4
Q ss_pred CcCCcceEEEecCccChHHHHHHHHHhc-cccccc----CCCcchhhHhHHHHhhhh
Q psy5911 331 DKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKK----DINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 331 ~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~~~~----~~~p~~ava~GAa~~a~~ 382 (1242)
-....+..+++||+.+-|++.+.|...+ |..+.. .++++..=|.+-|+.|..
T Consensus 287 ~~~~p~~l~vcGGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r 343 (371)
T COG2377 287 LQGDPRRLVVCGGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWR 343 (371)
T ss_pred ccCCCceeEeecCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHH
Confidence 3456889999999999999999999999 544432 456666656666666543
No 271
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1.97.1.4 from EC) in UniProt. It is not clear where this annotation comes from.
Probab=47.81 E-value=1.9e+02 Score=31.51 Aligned_cols=100 Identities=22% Similarity=0.284 Sum_probs=60.3
Q ss_pred eEEEEcCeecChHHHHHHHHHH--HHHHHHhHhcCCCCcEEE--EecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHH
Q psy5911 102 AWVEVKDKKLAPPQISAEILKK--MKSTAETFLNEKIEKAVI--TVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAA 177 (1242)
Q Consensus 102 ~~~~~~~~~~~~~~v~a~~L~~--l~~~a~~~~~~~~~~~vi--tVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAa 177 (1242)
+.+.+++..++|. .+....+. +++.. .-+..+..++. .+|.+|+.- +++++++...|.+. .+++--.||.
T Consensus 81 vavAvQDHG~~p~-~SnR~~RF~~~~~~L--~~g~~~~~~~y~~~~P~~~TRm--~av~~~~~~~~~~~-~vmDTg~AAv 154 (254)
T PF08735_consen 81 VAVAVQDHGFSPG-QSNRIFRFELWREFL--EEGGRPESFVYADDPPPYFTRM--RAVRESLGGAGYDE-VVMDTGPAAV 154 (254)
T ss_pred eEEEecccCCCCC-CccHHHHHHHHHHHH--hcCCCHHHeeecCCCcHHHHHH--HHHHHHhccCCCCc-eEecCHHHHH
Confidence 4556666667765 44444432 22222 12445667888 899997643 35666666666665 4555555555
Q ss_pred HHhccCCC-CCCcEEEEEEeCCcceeeeEEE
Q psy5911 178 LAYGLDKK-PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 178 l~y~~~~~-~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
+....+.. .....++++|+|-|.|=..++.
T Consensus 155 lGal~d~~v~~~~~~~~vniGN~HTlaa~v~ 185 (254)
T PF08735_consen 155 LGALCDPEVSSREGIIVVNIGNGHTLAALVK 185 (254)
T ss_pred hhhhcChhhhccCCeEEEEeCCccEEEEEEe
Confidence 55444332 2456688889999988888874
No 272
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=46.93 E-value=18 Score=40.92 Aligned_cols=32 Identities=25% Similarity=0.026 Sum_probs=22.0
Q ss_pred HHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEE
Q psy5911 173 PTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEI 208 (1242)
Q Consensus 173 p~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 208 (1242)
+.|.|...+.. -.+++++|+||.|+|++++.-
T Consensus 116 ~~a~A~~la~~----~~~~I~~DmGGTTtDi~~i~~ 147 (318)
T TIGR03123 116 WLATAQLIAKR----IPECLFVDMGSTTTDIIPIID 147 (318)
T ss_pred HHHHHHHHHhc----CCCEEEEEcCccceeeEEecC
Confidence 55544444332 334888899999999999863
No 273
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=45.90 E-value=21 Score=34.88 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEECCe
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGK 24 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~ 24 (1242)
.++|||+|+..+++|+.+...
T Consensus 2 riL~lD~G~kriGiAvsd~~~ 22 (135)
T PF03652_consen 2 RILGLDYGTKRIGIAVSDPLG 22 (135)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred eEEEEEeCCCeEEEEEecCCC
Confidence 589999999999999987653
No 274
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=45.39 E-value=17 Score=41.02 Aligned_cols=20 Identities=30% Similarity=0.209 Sum_probs=17.0
Q ss_pred cEEEEEeeCCCceEEEEEEE
Q psy5911 829 RIIVVYDLGGGTFDISVIEI 848 (1242)
Q Consensus 829 ~~vlV~D~GggT~dvsi~~~ 848 (1242)
.+++++|+||.|+|++++.-
T Consensus 128 ~~~I~~DmGGTTtDi~~i~~ 147 (318)
T TIGR03123 128 PECLFVDMGSTTTDIIPIID 147 (318)
T ss_pred CCEEEEEcCccceeeEEecC
Confidence 34788899999999999863
No 275
>cd00529 RuvC_resolvase Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination. HJR's occur in archaea, bacteria, and in the mitochondria of certain fungi, however this CD includes only the bacterial and mitochondrial HJR's. These are referred to as the RuvC family of Holliday junction resolvases, RuvC being the E.coli HJR. RuvC and its orthologs are homodimers and are structurely similar to RNase H and Hsp70.
Probab=45.33 E-value=27 Score=35.04 Aligned_cols=18 Identities=39% Similarity=0.745 Sum_probs=16.2
Q ss_pred eEEEEEcCccceEEEEEE
Q psy5911 4 KIIGIDLGTTNSCVAVLN 21 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~ 21 (1242)
.|+|||.|++++..|+.+
T Consensus 1 rILGIDPGl~~~G~av~~ 18 (154)
T cd00529 1 RILGIDPGSRNTGYGVIE 18 (154)
T ss_pred CEEEEccCcCceEEEEEE
Confidence 489999999999999974
No 276
>COG5026 Hexokinase [Carbohydrate transport and metabolism]
Probab=44.96 E-value=1.5e+02 Score=34.67 Aligned_cols=50 Identities=24% Similarity=0.224 Sum_probs=27.1
Q ss_pred HHHHHHHcCC--ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEE
Q psy5911 795 TKDAGKIAGL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 795 ~~~Aa~~AGl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
+.++.+.-|+ +++.++|+.+++.++-.+.. ...++-+=+|.||=-+-+..
T Consensus 187 l~e~l~~r~~pi~v~aviNDttgtlla~~yt~---~~~~iG~IfGTGtN~~y~e~ 238 (466)
T COG5026 187 LQEALSARNLPIRVVAVINDTTGTLLASVYTS---SETIIGIIFGTGTNGCYCEP 238 (466)
T ss_pred HHHHHHhcCCceEEEEEecccHHHHHHHhhcC---CCCeEEEEEecCccceEEee
Confidence 3333333343 56789999999887643322 22333334566555554444
No 277
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=44.08 E-value=31 Score=37.34 Aligned_cols=49 Identities=27% Similarity=0.262 Sum_probs=38.1
Q ss_pred CCccCcceEEEecCcCchHHHHHHHHhhhc----ccccccCCcchhhhhhHHH
Q psy5911 970 IDKSKISEIILVGGQTRMPLVQKMVSEFFE----KEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 970 ~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~----~~v~~~~~p~~aVa~GAa~ 1018 (1242)
.-+.++|.|+|+||.++...+-++|.++.. .-++...+-.+|.|.||-.
T Consensus 292 vL~G~vDaIvLTGGiA~~~~f~~~I~~~v~~iapv~v~PGE~EleALA~G~lR 344 (358)
T COG3426 292 VLKGKVDAIVLTGGIAYEKLFVDAIEDRVSWIAPVIVYPGEDELEALAEGALR 344 (358)
T ss_pred hcCCCCCEEEEecchhhHHHHHHHHHHHHhhhcceEecCCchHHHHHHhhhHH
Confidence 334579999999999999999999988763 3345556667899999843
No 278
>TIGR00016 ackA acetate kinase. Acetate kinase is involved in the activation of acetate to acetyl CoA and in the secretion of acetate. It catalyzes the reaction ATP + acetate = ADP + acetyl phosphate. Some members of this family have been shown to act on propionate as well as acetate. An example of a propionate/acetate kinase is TdcD of E. coli, an enzyme of an anaerobic pathway of threonine catabolism. It is not known how many members of this family act on additional substrates besides acetate.
Probab=44.04 E-value=3e+02 Score=32.30 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhh
Q psy5911 952 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 998 (1242)
Q Consensus 952 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 998 (1242)
-++.++.+.|-......+ ..+|.|+++||-+ ..+.+++.+.+.+
T Consensus 308 ~f~yri~k~Iga~~a~L~---G~vDaiVFTGGIGEns~~vr~~i~~~l 352 (404)
T TIGR00016 308 MYVHRIAKYIGSYIASLE---GNLDAIVFTGGIGENAATVRELVLEAL 352 (404)
T ss_pred HHHHHHHHHHHHHHHHhC---CCCCEEEEcCccccCCHHHHHHHHhhh
Confidence 334444444444443332 1489999999999 9999999998765
No 279
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=40.47 E-value=87 Score=25.73 Aligned_cols=42 Identities=10% Similarity=0.218 Sum_probs=32.3
Q ss_pred HHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCee
Q psy5911 125 KSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVL 167 (1242)
Q Consensus 125 ~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~ 167 (1242)
.+..+.+.... ....++.|+.++..+|..+.+.|+..||...
T Consensus 5 ~~~i~~F~~s~-~~~~l~f~p~lt~~eR~~vH~~a~~~gL~s~ 46 (60)
T cd02640 5 RQIIQNYAHSD-DIRDMVFSPEFSKEERALIHQIAQKYGLKSR 46 (60)
T ss_pred HHHHHHHHcCC-ccceEEcCCCCCHHHHHHHHHHHHHcCCcee
Confidence 33444444432 4678999999999999999999999999653
No 280
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=39.91 E-value=1.1e+02 Score=25.11 Aligned_cols=42 Identities=10% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCcee
Q psy5911 765 KSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVL 807 (1242)
Q Consensus 765 ~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~ 807 (1242)
.+..+.+.... ....++.|..++..+|..+.+.|+..||...
T Consensus 5 ~~~i~~F~~s~-~~~~l~f~p~lt~~eR~~vH~~a~~~gL~s~ 46 (60)
T cd02640 5 RQIIQNYAHSD-DIRDMVFSPEFSKEERALIHQIAQKYGLKSR 46 (60)
T ss_pred HHHHHHHHcCC-ccceEEcCCCCCHHHHHHHHHHHHHcCCcee
Confidence 44445555432 4678899999999999999999999999763
No 281
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P). The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
Probab=39.52 E-value=44 Score=35.35 Aligned_cols=25 Identities=20% Similarity=0.539 Sum_probs=22.1
Q ss_pred CCCcEEEEEeeCCCceEEEEEEEee
Q psy5911 826 PDDRIIVVYDLGGGTFDISVIEIAN 850 (1242)
Q Consensus 826 ~~~~~vlV~D~GggT~dvsi~~~~~ 850 (1242)
...+.+|++|+||.++-++++++..
T Consensus 60 ~E~G~~LalDlGGTnlRv~~V~L~g 84 (206)
T PF00349_consen 60 NEKGDFLALDLGGTNLRVALVELSG 84 (206)
T ss_dssp TTEEEEEEEEESSSSEEEEEEEEES
T ss_pred CCCceEEEEeecCcEEEEEEEEEcC
Confidence 3457899999999999999999986
No 282
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=38.97 E-value=30 Score=33.92 Aligned_cols=22 Identities=32% Similarity=0.338 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNG 23 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g 23 (1242)
+..++|||+||-.+.+|+.+..
T Consensus 1 ~~~ilalD~G~KrIGvA~sd~~ 22 (141)
T COG0816 1 GMRILALDVGTKRIGVAVSDIL 22 (141)
T ss_pred CceEEEEecCCceEEEEEecCC
Confidence 3578999999999999998654
No 283
>PRK14878 UGMP family protein; Provisional
Probab=38.97 E-value=6.4e+02 Score=28.78 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=25.9
Q ss_pred CcceEEEecCcCchHHHHHHHHhhh---ccccccc
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKD 1005 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~ 1005 (1242)
.+..|+|+||.+...++++.+.+.+ +.++..+
T Consensus 241 g~~~vvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~ 275 (323)
T PRK14878 241 GKKEVLLVGGVAANRRLREKLEIMAEDRGAKFYVV 275 (323)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECC
Confidence 3678999999999999999999877 4455443
No 284
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P). The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
Probab=38.43 E-value=45 Score=35.25 Aligned_cols=26 Identities=19% Similarity=0.491 Sum_probs=22.3
Q ss_pred CCCcEEEEEEeCCcceeeeEEEEEee
Q psy5911 186 PDDRIIVVYDLGGGTFDISVIEIANV 211 (1242)
Q Consensus 186 ~~~~~vlV~D~GggT~Dvsv~~~~~~ 211 (1242)
.+.+.+|++|+||.++-|+.+++.+.
T Consensus 60 ~E~G~~LalDlGGTnlRv~~V~L~g~ 85 (206)
T PF00349_consen 60 NEKGDFLALDLGGTNLRVALVELSGN 85 (206)
T ss_dssp TTEEEEEEEEESSSSEEEEEEEEESS
T ss_pred CCCceEEEEeecCcEEEEEEEEEcCC
Confidence 35567899999999999999999763
No 285
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=37.91 E-value=75 Score=36.15 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=33.8
Q ss_pred CcceEEEecCcCchHHHHHHHHhhh---cccccccC---CcchhhhhhHH
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGAS 1017 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~---~p~~aVa~GAa 1017 (1242)
.++.|+|.||.+...++++.|.+.. +.++..+. --|.+++.|+|
T Consensus 259 ~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~a 308 (314)
T TIGR03723 259 GLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAA 308 (314)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHH
Confidence 4678999999999999999999887 44444333 34677888875
No 286
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=37.85 E-value=32 Score=33.78 Aligned_cols=21 Identities=38% Similarity=0.526 Sum_probs=18.1
Q ss_pred CeEEEEEcCccceEEEEEECC
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNG 23 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g 23 (1242)
..++|||+|+..+.+|+.+..
T Consensus 4 ~~iLalD~G~kriGvAv~d~~ 24 (138)
T PRK00109 4 GRILGLDVGTKRIGVAVSDPL 24 (138)
T ss_pred CcEEEEEeCCCEEEEEEecCC
Confidence 469999999999999998653
No 287
>KOG2708|consensus
Probab=37.36 E-value=3.5e+02 Score=28.53 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=47.7
Q ss_pred EEcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcc--cccccCCcchhhhhhH
Q psy5911 940 KITRSKLE-SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK--EVKKDINPDEAVAVGA 1016 (1242)
Q Consensus 940 ~itr~~fe-~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~--~v~~~~~p~~aVa~GA 1016 (1242)
..|.+++- ++-+.+|.-+.+..++++...+ -+.|++|||-.+.-.+|++....... -.....|-..++-.|+
T Consensus 224 ~~t~~DLCySLQEtvFamLVEiTERAMAh~~-----s~evLIVGGVGCN~RLQeMM~~Mc~eRgg~~faTDeRfCIDNG~ 298 (336)
T KOG2708|consen 224 EVTKEDLCYSLQETVFAMLVEITERAMAHCG-----SKEVLIVGGVGCNERLQEMMAIMCSERGGKLFATDERFCIDNGV 298 (336)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCcEEEEecccccHHHHHHHHHHHHhcCCceEecccceeeeCch
Confidence 34444432 3344555666666677776554 35799999999999999999887732 1223445556676776
Q ss_pred HH
Q psy5911 1017 SV 1018 (1242)
Q Consensus 1017 a~ 1018 (1242)
.+
T Consensus 299 MI 300 (336)
T KOG2708|consen 299 MI 300 (336)
T ss_pred HH
Confidence 55
No 288
>COG4012 Uncharacterized protein conserved in archaea [Function unknown]
Probab=36.94 E-value=1.2e+02 Score=32.52 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=39.1
Q ss_pred eeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 808 RIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 808 ~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
.+++.-.||+..+..+.. ....||+|+|-|.+-.+++.-+ .+.-+.......|.-+.|-..|.+++.
T Consensus 208 v~mDskfaav~gal~dpa--a~palvVd~GngHttaalvded------RI~gv~EHHT~~Lspekled~I~rf~~ 274 (342)
T COG4012 208 VAMDSKFAAVMGALVDPA--ADPALVVDYGNGHTTAALVDED------RIVGVYEHHTIRLSPEKLEDQIIRFVE 274 (342)
T ss_pred EEEcchhHhhhhcccCcc--cCceEEEEccCCceEEEEecCC------eEEEEeecccccCCHHHHHHHHHHHHh
Confidence 455555666666655543 3368889999999999988532 233333333344555555444444443
No 289
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=35.83 E-value=6.9e+02 Score=28.23 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF 358 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f 358 (1242)
+.+.++++++.. .++.|+|+||.+.-.++++.|.+.+
T Consensus 246 l~~~~~~~~~~~-----g~~~vvlsGGVa~N~~L~~~l~~~~ 282 (305)
T TIGR00329 246 LIEKTKRALKDT-----GPKELVLVGGVSANKRLREMLETLC 282 (305)
T ss_pred HHHHHHHHHHHc-----CCCEEEEECCHHHHHHHHHHHHHHH
Confidence 334445555443 4778999999999999999998876
No 290
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1.97.1.4 from EC) in UniProt. It is not clear where this annotation comes from.
Probab=35.30 E-value=5.1e+02 Score=28.29 Aligned_cols=100 Identities=23% Similarity=0.292 Sum_probs=60.4
Q ss_pred eEEEEcCeeeChHHHHHHHHHH--HHHHHHhHhCCCCCcEEE--EecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHH
Q psy5911 742 AWVEVKDQYCAPPQISAEILKK--MKSTAETFLNEKIEKAVI--TVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAA 817 (1242)
Q Consensus 742 ~~~~~~~~~~~~~~v~a~~L~~--l~~~a~~~~~~~~~~~Vi--tVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAa 817 (1242)
+.+.+.+..++|. .+....+. +++..+ -+..+..++. .+|.+|+.- +++++.+.-.|.+. .+.+--.||.
T Consensus 81 vavAvQDHG~~p~-~SnR~~RF~~~~~~L~--~g~~~~~~~y~~~~P~~~TRm--~av~~~~~~~~~~~-~vmDTg~AAv 154 (254)
T PF08735_consen 81 VAVAVQDHGFSPG-QSNRIFRFELWREFLE--EGGRPESFVYADDPPPYFTRM--RAVRESLGGAGYDE-VVMDTGPAAV 154 (254)
T ss_pred eEEEecccCCCCC-CccHHHHHHHHHHHHh--cCCCHHHeeecCCCcHHHHHH--HHHHHHhccCCCCc-eEecCHHHHH
Confidence 5566777777776 44443332 333321 2445667888 899987642 45556666566555 4555555555
Q ss_pred HHccCCCC-CCCcEEEEEeeCCCceEEEEEE
Q psy5911 818 LAYGLDKK-PDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 818 l~y~~~~~-~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
+....+.. .....++++|+|-|.|-..++.
T Consensus 155 lGal~d~~v~~~~~~~~vniGN~HTlaa~v~ 185 (254)
T PF08735_consen 155 LGALCDPEVSSREGIIVVNIGNGHTLAALVK 185 (254)
T ss_pred hhhhcChhhhccCCeEEEEeCCccEEEEEEe
Confidence 55544332 2345578889999999888884
No 291
>KOG2708|consensus
Probab=34.27 E-value=4.6e+02 Score=27.68 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=47.5
Q ss_pred EEcHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccc--ccccCCCcchhhHhHH
Q psy5911 300 KITRSKLE-SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK--EVKKDINPDEAVAVGA 376 (1242)
Q Consensus 300 ~itr~~fe-~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~--~~~~~~~p~~ava~GA 376 (1242)
..|.+++- ++-+.+|.-+.+.-++++...+ -+.|++|||-..--.+|+++...... -.....|-..|+-.|+
T Consensus 224 ~~t~~DLCySLQEtvFamLVEiTERAMAh~~-----s~evLIVGGVGCN~RLQeMM~~Mc~eRgg~~faTDeRfCIDNG~ 298 (336)
T KOG2708|consen 224 EVTKEDLCYSLQETVFAMLVEITERAMAHCG-----SKEVLIVGGVGCNERLQEMMAIMCSERGGKLFATDERFCIDNGV 298 (336)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCcEEEEecccccHHHHHHHHHHHHhcCCceEecccceeeeCch
Confidence 34555443 3444566666677777777665 45799999999999999999877621 1222334455666665
Q ss_pred HH
Q psy5911 377 SV 378 (1242)
Q Consensus 377 a~ 378 (1242)
.+
T Consensus 299 MI 300 (336)
T KOG2708|consen 299 MI 300 (336)
T ss_pred HH
Confidence 44
No 292
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=33.83 E-value=9.5e+02 Score=29.28 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=56.3
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHH-HHHHHhcccccccCCC-cchhhHhHHH
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQ-KMVSEFFEKEVKKDIN-PDEAVAVGAS 377 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~-~~l~~~f~~~~~~~~~-p~~ava~GAa 377 (1242)
...-.++-..++..++++...+-..+.+.. ..+.+.+.||...--... +++.+-+...+...+. -|.-.|.|||
T Consensus 255 ~~~~~diAasaQ~~lE~l~l~~~~~~~~~~----g~~~L~~AGGVAlNv~~N~~~l~~~~f~dlfV~Pa~gD~G~AvGAA 330 (555)
T COG2192 255 TERAADIAASAQAYLEELVLEMLRYLREET----GEDNLALAGGVALNVKANGKLLRRGLFEDLFVQPAMGDAGLAVGAA 330 (555)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHh----CccceEEccceeeeeeehHhHhhcccCceeEecCCCCCcchHHHHH
Confidence 344556666677777777766666665432 156899999988766665 6777776666655444 4778999999
Q ss_pred HhhhhhcC
Q psy5911 378 VQAGVLSG 385 (1242)
Q Consensus 378 ~~a~~l~~ 385 (1242)
+++....+
T Consensus 331 l~~~~~~~ 338 (555)
T COG2192 331 LAVKRELG 338 (555)
T ss_pred HHHHHHhc
Confidence 99875443
No 293
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=33.00 E-value=1.4e+02 Score=24.45 Aligned_cols=43 Identities=14% Similarity=0.323 Sum_probs=32.2
Q ss_pred HHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCcee
Q psy5911 764 MKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVL 807 (1242)
Q Consensus 764 l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~ 807 (1242)
+.+....+...+ ....++.|+.++..||..+.+.|+..||...
T Consensus 4 ~~~~i~~F~~~~-~~~~l~F~p~ls~~eR~~vH~lA~~~gL~s~ 46 (60)
T cd02641 4 LKAMVKAFMKDP-KATELEFPPTLSSHDRLLVHELAEELGLRHE 46 (60)
T ss_pred HHHHHHHHHcCC-CcCcEECCCCCCHHHHHHHHHHHHHcCCceE
Confidence 344444444432 3467899999999999999999999998753
No 294
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed
Probab=32.46 E-value=2.2e+02 Score=33.44 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhc
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 358 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 358 (1242)
++-++.++.+.|-...... ...+|.|+++||-+ ..+.|++.|.+.+
T Consensus 302 ~d~f~yri~k~Iga~~a~L---~g~vDaiVfTGGIgE~s~~lr~~I~~~l 348 (402)
T PRK00180 302 LDVFVYRLAKYIGSYAAAL---NGRLDAIVFTAGIGENSALVREKVLEGL 348 (402)
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCCEEEEcCccccCCHHHHHHHHhhh
Confidence 3444455555554444433 13599999999999 9999999998776
No 295
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=32.04 E-value=39 Score=34.26 Aligned_cols=20 Identities=30% Similarity=0.547 Sum_probs=17.5
Q ss_pred CCeEEEEEcCccceEEEEEE
Q psy5911 2 YCKIIGIDLGTTNSCVAVLN 21 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~ 21 (1242)
|..|+|||-|++++..|+.+
T Consensus 1 ~m~iLGIDPgl~~tG~avi~ 20 (164)
T PRK00039 1 MMRILGIDPGLRRTGYGVIE 20 (164)
T ss_pred CCEEEEEccccCceeEEEEE
Confidence 34799999999999999875
No 296
>PRK07058 acetate kinase; Provisional
Probab=31.12 E-value=1e+02 Score=35.91 Aligned_cols=46 Identities=9% Similarity=0.146 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhc
Q psy5911 309 LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 358 (1242)
Q Consensus 309 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 358 (1242)
.++-++.++.+.|-...... ..+|.|+++||-+ ..+.+++.+.+.+
T Consensus 297 A~d~f~yri~k~IGa~~a~L----g~vDaiVfTGGIgEns~~vr~~i~~~l 343 (396)
T PRK07058 297 ALDLFALRIAGEIARLAATL----GGLDAVVFTAGIGEHQPAIRAAVCERL 343 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhh
Confidence 34444555555555554433 3599999999999 9999999998776
No 297
>PRK09698 D-allose kinase; Provisional
Probab=31.07 E-value=7.9e+02 Score=27.50 Aligned_cols=48 Identities=25% Similarity=0.284 Sum_probs=31.1
Q ss_pred CcceEEEecCcCch-----HHHHHHHHhhhc-------ccccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRM-----PLVQKMVSEFFE-------KEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~i-----p~v~~~l~~~f~-------~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.+.. +.+++.+++..- .++......+.+.+.|||..+.
T Consensus 236 dP~~IvlgG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 295 (302)
T PRK09698 236 DPDAIILGGGVMDMPAFPRETLIAMIQKYLRKPLPYEVVRFIYASSSDFNGAQGAAILAH 295 (302)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHHHHccCccccCCcEEEECCcCCcccHHhHHHHHH
Confidence 57889888887764 345555555431 1234455567788999998763
No 298
>COG4012 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.56 E-value=1.9e+02 Score=31.28 Aligned_cols=86 Identities=19% Similarity=0.262 Sum_probs=47.6
Q ss_pred EecCCCCHHHHHHHHHHHH---HcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEE
Q psy5911 142 TVPAYFNDSQRQATKDAGK---IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFE 218 (1242)
Q Consensus 142 tVPa~f~~~qr~~~~~Aa~---~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~ 218 (1242)
-+|.+|+. |+.|+. .++-. ..+++.-.||+..+..+.. ....||+|+|-|.+..+++.- +.+.
T Consensus 185 eiPe~FtR-----Mraaa~sal~~~t~-av~mDskfaav~gal~dpa--a~palvVd~GngHttaalvde------dRI~ 250 (342)
T COG4012 185 EIPESFTR-----MRAAAMSALSAGTD-AVAMDSKFAAVMGALVDPA--ADPALVVDYGNGHTTAALVDE------DRIV 250 (342)
T ss_pred cCchhHHH-----HHHHHHHHHhcCce-EEEEcchhHhhhhcccCcc--cCceEEEEccCCceEEEEecC------CeEE
Confidence 36777763 444333 33333 3455666666666555443 347889999999999988752 2333
Q ss_pred EEEecCCCCcchHHHHHHHHHHH
Q psy5911 219 VLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 219 v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
-+.......|.-+.|-..|.+++
T Consensus 251 gv~EHHT~~Lspekled~I~rf~ 273 (342)
T COG4012 251 GVYEHHTIRLSPEKLEDQIIRFV 273 (342)
T ss_pred EEeecccccCCHHHHHHHHHHHH
Confidence 33333334445554444444443
No 299
>PF02075 RuvC: Crossover junction endodeoxyribonuclease RuvC; InterPro: IPR002176 The Escherichia coli ruvC gene is involved in DNA repair and in the late step of RecE and RecF pathway recombination []. RuvC protein (3.1.22.4 from EC) cleaves cruciform junctions, which are formed by the extrusion of inverted repeat sequences from a super-coiled plasmid and which are structurally analogous to Holliday junctions, by introducing nicks into strands with the same polarity. The nicks leave a 5'terminal phosphate and a 3'terminal hydroxyl group which are ligated by E. coli or Bacteriophage T4 DNA ligases. Analysis of the cleavage sites suggests that DNA topology rather than a particular sequence determines the cleavage site. RuvC protein also cleaves Holliday junctions that are formed between gapped circular and linear duplex DNA by the function of RecA protein. The active form of RuvC protein is a dimer. This is mechanistically suited for an endonuclease involved in swapping DNA strands at the crossover junctions. It is inferred that RuvC protein is an endonuclease that resolves Holliday structures in vivo []. RucC is a small protein of about 20 kD. It requires and binds a magnesium ion. The structure of E. coli ruvC is a 3-layer alpha-beta sandwich containing a 5-stranded beta-sheet sandwiched between 5 alpha-helices [].; GO: 0004520 endodeoxyribonuclease activity, 0006281 DNA repair, 0006310 DNA recombination; PDB: 1HJR_A.
Probab=29.68 E-value=76 Score=31.62 Aligned_cols=24 Identities=46% Similarity=0.743 Sum_probs=16.9
Q ss_pred EEEEEcCccceEEEEEE--CCeEEEE
Q psy5911 5 IIGIDLGTTNSCVAVLN--NGKPQVI 28 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~--~g~~~ii 28 (1242)
|+|||-|++++..|+.+ ++....+
T Consensus 1 ILGIDPgl~~tG~avi~~~~~~~~~i 26 (149)
T PF02075_consen 1 ILGIDPGLSNTGYAVIEEDGGKLRLI 26 (149)
T ss_dssp EEEEE--SSEEEEEEEEEETTEEEEE
T ss_pred CEEECCCCCCeeEEEEEeeCCEEEEE
Confidence 79999999999999984 3444444
No 300
>COG4020 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.45 E-value=6e+02 Score=27.42 Aligned_cols=59 Identities=19% Similarity=0.197 Sum_probs=38.4
Q ss_pred CcCCcceEEEecCccChHH---HHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceE
Q psy5911 331 DKSKISEIILVGGQTRMPL---VQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVL 391 (1242)
Q Consensus 331 ~~~~i~~ViLvGG~s~ip~---v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~ 391 (1242)
...+.+.|+|.|--+-+.. +++.|..+...++ ..-|.++.+.|.|+.|.-.+...++++
T Consensus 265 ~~~~~d~v~laGsvg~~~ep~dv~~ri~~~v~~k~--~~l~~esaaiG~a~IA~DI~~Gkr~IL 326 (332)
T COG4020 265 VVYGCDGVVLAGSVGGDREPMDVLKRIKSKVFNKV--AVLPPESAAIGLALIARDIASGKRSIL 326 (332)
T ss_pred eecCCceEEEecccccccchhhHHHHHHHHHHHHH--hhcCchhhhhhhHHHHHHHHcCcccee
Confidence 3456889999996666555 6666665543222 223556689999999887665445544
No 301
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=29.36 E-value=1.3e+02 Score=37.14 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=38.3
Q ss_pred CcceEEEecCcCchHHHHHHHHhhh---cccccccC---CcchhhhhhHHHhhhhhcc
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~---~p~~aVa~GAa~~a~~l~~ 1025 (1242)
.++.|+|+||.+...++++.|.+.+ +.++..+. -.|.+++.|++.+....++
T Consensus 245 g~~~lvlsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~~~~D~g~~ia~a~~~~~~~g 302 (535)
T PRK09605 245 GKDEVLLVGGVAANNRLREMLKEMCEERGADFYVPEPRFCGDNGAMIAWLGLLMYKAG 302 (535)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCccccchHHHHHHHHHHHHHcC
Confidence 3678999999999999999999665 44554443 4578899988865444333
No 302
>PRK07058 acetate kinase; Provisional
Probab=28.36 E-value=5.4e+02 Score=30.11 Aligned_cols=45 Identities=9% Similarity=0.146 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhh
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 998 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 998 (1242)
++-.+.++.+.|-......+ .+|.|+++||-+ +.+.+++.+.+.+
T Consensus 298 ~d~f~yri~k~IGa~~a~Lg----~vDaiVfTGGIgEns~~vr~~i~~~l 343 (396)
T PRK07058 298 LDLFALRIAGEIARLAATLG----GLDAVVFTAGIGEHQPAIRAAVCERL 343 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCEEEECCccccCcHHHHHHHHhhh
Confidence 34444555555555444332 599999999999 9999999998766
No 303
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=28.32 E-value=1.8e+02 Score=23.83 Aligned_cols=41 Identities=15% Similarity=0.339 Sum_probs=31.0
Q ss_pred HHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCe
Q psy5911 125 KSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEV 166 (1242)
Q Consensus 125 ~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~ 166 (1242)
.+....+...+ ....+.-|+.++..||..+.+.|+..||..
T Consensus 5 ~~~i~~F~~~~-~~~~l~F~p~ls~~eR~~vH~lA~~~gL~s 45 (60)
T cd02641 5 KAMVKAFMKDP-KATELEFPPTLSSHDRLLVHELAEELGLRH 45 (60)
T ss_pred HHHHHHHHcCC-CcCcEECCCCCCHHHHHHHHHHHHHcCCce
Confidence 33444444432 346789999999999999999999999864
No 304
>smart00030 CLb CLUSTERIN Beta chain.
Probab=28.29 E-value=5.3e+02 Score=26.76 Aligned_cols=79 Identities=11% Similarity=0.183 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC--CHHHH
Q psy5911 1148 LSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEEKESIEKSISNLELLIKGD--DIELI 1225 (1242)
Q Consensus 1148 l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~--~~~~~ 1225 (1242)
.+++++.++-..-.++..+ ++.+|.+- +-+||..++. ++++++++...|.+..+==++. ...+.
T Consensus 4 ~~~~~Lk~lS~~G~kyvd~-----EI~nAl~G----vKqMK~~mer-----~~eeh~~ll~tLe~~kk~KeeAlk~~~e~ 69 (206)
T smart00030 4 VSDNELQEMSTQGSKYINK-----EIKNALKG----VKQIKTLIEK-----TNKERKSLLSTLEEAKKKKEEALKDTRES 69 (206)
T ss_pred CChhhHHHHHHHhHHHHHH-----HHHHHHHH----HHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777776666655432 23333333 3456666665 5778888888888876654433 45677
Q ss_pred HHHHHHHHHHHHHHh
Q psy5911 1226 KKGNEDLLKISENII 1240 (1242)
Q Consensus 1226 ~~~~~~l~~~~~~~~ 1240 (1242)
+++|++-+.+|..-|
T Consensus 70 e~kL~E~~~vCnetm 84 (206)
T smart00030 70 EEKLKESQGVCNETM 84 (206)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888875543
No 305
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=28.02 E-value=1.5e+02 Score=33.55 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc
Q psy5911 313 LISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF 358 (1242)
Q Consensus 313 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f 358 (1242)
.++-+.+..+++++..+ .+.++++||-+.-..+|+++++..
T Consensus 245 v~~~L~~kt~rAl~~~~-----~~~lvi~GGVaaN~~LR~~l~~~~ 285 (342)
T COG0533 245 VFDMLVEKTERALKHTG-----KKELVIAGGVAANSRLREMLEEMC 285 (342)
T ss_pred HHHHHHHHHHHHHHHhC-----CCEEEEeccHHHhHHHHHHHHHHH
Confidence 45555666777777665 567999999999999999998866
No 306
>PLN02362 hexokinase
Probab=27.74 E-value=1.2e+02 Score=36.88 Aligned_cols=50 Identities=16% Similarity=0.160 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCC--CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeee
Q psy5911 152 RQATKDAGKIAGL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDIS 204 (1242)
Q Consensus 152 r~~~~~Aa~~AGl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvs 204 (1242)
.+.+.+|...-|+ ++..++|+.+|..++..+... ...+-+=+|.||=-+-
T Consensus 208 v~lL~~Al~r~~l~v~v~AlvNDTVgTL~a~aY~~~---~~~iG~IlGTGtNacY 259 (509)
T PLN02362 208 AECLQGALNRRGLDMRVAALVNDTVGTLALGHYHDP---DTVAAVIIGTGTNACY 259 (509)
T ss_pred HHHHHHHHHHcCCCcEEEEEEEcCHHHHHhhhcCCC---CceEEEEEECCccceE
Confidence 3344444444454 678899999998887655322 2333334677764443
No 307
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=27.62 E-value=9.3e+02 Score=27.19 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh
Q psy5911 957 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF 998 (1242)
Q Consensus 957 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f 998 (1242)
+.+.++++++.. .++.|+|+||.+...++++.+.+.+
T Consensus 246 l~~~~~~~~~~~-----g~~~vvlsGGVa~N~~L~~~l~~~~ 282 (305)
T TIGR00329 246 LIEKTKRALKDT-----GPKELVLVGGVSANKRLREMLETLC 282 (305)
T ss_pred HHHHHHHHHHHc-----CCCEEEEECCHHHHHHHHHHHHHHH
Confidence 334445555443 4678999999999999999998877
No 308
>cd02646 R3H_G-patch R3H domain of a group of fungal and plant proteins with unknown function, who also contain a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the R3H domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=27.62 E-value=1.4e+02 Score=24.25 Aligned_cols=41 Identities=17% Similarity=0.378 Sum_probs=31.2
Q ss_pred HHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCe
Q psy5911 123 KMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEV 166 (1242)
Q Consensus 123 ~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~ 166 (1242)
.+.+..+.++... .-.++-|+ ++..+|..+.+.|...||..
T Consensus 3 ~i~~~i~~F~~~~--~~~~~fpp-m~~~~R~~vH~lA~~~~L~S 43 (58)
T cd02646 3 DIKDEIEAFLLDS--RDSLSFPP-MDKHGRKTIHKLANCYNLKS 43 (58)
T ss_pred HHHHHHHHHHhCC--CceEecCC-CCHHHHHHHHHHHHHcCCcc
Confidence 4455555555543 55678999 89999999999999999854
No 309
>PRK05082 N-acetylmannosamine kinase; Provisional
Probab=27.60 E-value=2e+02 Score=32.15 Aligned_cols=48 Identities=15% Similarity=0.148 Sum_probs=32.0
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc-------cccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK-------EVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~-------~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.|+.+..+.+.+.+++.+.. ++..+.-.+.+.+.|||..+.
T Consensus 233 dpe~IvlgG~~~~~~~~~~~i~~~l~~~~~~~~~~i~~s~~~~~~~~~GAa~~~~ 287 (291)
T PRK05082 233 DCQCVVLGGSVGLAEGYLELVQAYLAQEPAIYHVPLLAAHYRHDAGLLGAALWAQ 287 (291)
T ss_pred CCCEEEEcCccccHHHHHHHHHHHHHhcccccCCeEEECccCCchhhhhHHHHhc
Confidence 468899988887766666666655531 233344457788999998763
No 310
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=27.42 E-value=1.7e+02 Score=33.29 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=43.9
Q ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc---ccccccCCcchhhhhh
Q psy5911 943 RSKLESLVED----LISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE---KEVKKDINPDEAVAVG 1015 (1242)
Q Consensus 943 r~~fe~~~~~----~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~---~~v~~~~~p~~aVa~G 1015 (1242)
.++.++++.. .++-+.+..+++++..+ .+.++++||-+....+|+++++... .+++ -+.++.|.-.|
T Consensus 231 ~~d~~dia~sfQ~av~~~L~~kt~rAl~~~~-----~~~lvi~GGVaaN~~LR~~l~~~~~~~g~~~~-~p~~~lCtDNa 304 (342)
T COG0533 231 EEDKEDIAASFQEAVFDMLVEKTERALKHTG-----KKELVIAGGVAANSRLREMLEEMCKERGAEVY-IPPLELCTDNA 304 (342)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCEEEEeccHHHhHHHHHHHHHHHHhcCCEEE-cCChHhccchH
Confidence 3444444443 44555666677777655 5679999999999999999988763 2222 34444554444
Q ss_pred HH
Q psy5911 1016 AS 1017 (1242)
Q Consensus 1016 Aa 1017 (1242)
|-
T Consensus 305 aM 306 (342)
T COG0533 305 AM 306 (342)
T ss_pred HH
Confidence 43
No 311
>smart00842 FtsA Cell division protein FtsA. FtsA is essential for bacterial cell division, and co-localizes to the septal ring with FtsZ. It has been suggested that the interaction of FtsA-FtsZ has arisen through coevolution in different bacterial strains PUBMED:9352931.
Probab=27.32 E-value=1.6e+02 Score=30.45 Aligned_cols=28 Identities=39% Similarity=0.338 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHcCCceeeeechhHHHHH
Q psy5911 791 QRQATKDAGKIAGLEVLRIINEPTAAAL 818 (1242)
Q Consensus 791 qr~~~~~Aa~~AGl~~~~li~Ep~AAal 818 (1242)
..+.+.++.+.+||++..++.+|.|++.
T Consensus 158 ~v~n~~~~v~~agl~v~~i~~~~~A~~~ 185 (187)
T smart00842 158 AIQNLEKCVERAGLEVDGIVLEPLASAE 185 (187)
T ss_pred HHHHHHHHHHHcCCchhhEEehhhhhEe
Confidence 3445555666666666666666666543
No 312
>cd02646 R3H_G-patch R3H domain of a group of fungal and plant proteins with unknown function, who also contain a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the R3H domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=26.92 E-value=1.4e+02 Score=24.20 Aligned_cols=42 Identities=17% Similarity=0.378 Sum_probs=32.2
Q ss_pred HHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCce
Q psy5911 762 KKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEV 806 (1242)
Q Consensus 762 ~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~ 806 (1242)
+.+++..+.++... .-.++.|+ ++..+|..+.+.|...||..
T Consensus 2 ~~i~~~i~~F~~~~--~~~~~fpp-m~~~~R~~vH~lA~~~~L~S 43 (58)
T cd02646 2 EDIKDEIEAFLLDS--RDSLSFPP-MDKHGRKTIHKLANCYNLKS 43 (58)
T ss_pred hHHHHHHHHHHhCC--CceEecCC-CCHHHHHHHHHHHHHcCCcc
Confidence 34555566665543 55679999 89999999999999998865
No 313
>KOG1369|consensus
Probab=26.76 E-value=86 Score=37.33 Aligned_cols=152 Identities=17% Similarity=0.186 Sum_probs=0.0
Q ss_pred CeEEEEEcCccceEEEEEE-CCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhch-hhhCCCCCC
Q psy5911 3 CKIIGIDLGTTNSCVAVLN-NGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIK-RLIGRKYTD 80 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~-~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k-~~lg~~~~~ 80 (1242)
...++||||.||-.|.... +|.-+.+.-..-...+|.-+... .++.+|..=|.....-.-..-..... .-+|-.|+
T Consensus 86 G~~lalDLGGTn~Rv~~v~L~g~~~~~~~~~~~~~ip~~~m~g-t~~~Lfd~Ia~~l~~F~~~~~~~~~~~l~lgFTFS- 163 (474)
T KOG1369|consen 86 GKFLALDLGGTNFRVLLVKLGGGRTSVRMYNKIYAIPEEIMQG-TGEELFDFIARCLADFLDKMGLKGASKLPLGFTFS- 163 (474)
T ss_pred CCEEEEecCCCceEEEEEEecCCcccceeeeeeEecCHHHHcC-chHHHHHHHHHHHHHHHHHhccccccccccceEEe-
Q ss_pred hHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 81 EIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 160 (1242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~ 160 (1242)
+|..-.....+.+.-.-++ +.++.-....--+.+.+|.+
T Consensus 164 ---------fP~~Q~si~~g~L~~wTkG--------------------------------f~~~~~~g~Dvv~~L~eal~ 202 (474)
T KOG1369|consen 164 ---------FPCRQTSIDKGTLIRWTKG--------------------------------FKATDCEGEDVVRLLREAIK 202 (474)
T ss_pred ---------eeeeecccccceEEEeccc--------------------------------ccchhhhcchHHHHHHHHHH
Q ss_pred HcCCC---eeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcc
Q psy5911 161 IAGLE---VLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGT 200 (1242)
Q Consensus 161 ~AGl~---~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT 200 (1242)
.-|+. +..++|..++..++..+... ++++-+=+|.||
T Consensus 203 rr~~~~i~V~AlvNDTvGtl~~~~y~~~---~~~igvI~GTGt 242 (474)
T KOG1369|consen 203 RRGLFDMDVVAVVNDTVGTLMTCAYEDP---NCEIGVIFGTGT 242 (474)
T ss_pred HcCCcceEEEEEEecCHHhHhhceecCC---CcEEEEEECCCc
No 314
>COG4020 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.54 E-value=5.3e+02 Score=27.81 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=37.3
Q ss_pred ccCcceEEEecCcCchHH---HHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceE
Q psy5911 972 KSKISEIILVGGQTRMPL---VQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVL 1031 (1242)
Q Consensus 972 ~~~i~~ViLvGG~s~ip~---v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~ 1031 (1242)
....+.|+|.|--+-+.. |++.|++..-.++. .-|.+..+.|.|+.|.-.+...++++
T Consensus 266 ~~~~d~v~laGsvg~~~ep~dv~~ri~~~v~~k~~--~l~~esaaiG~a~IA~DI~~Gkr~IL 326 (332)
T COG4020 266 VYGCDGVVLAGSVGGDREPMDVLKRIKSKVFNKVA--VLPPESAAIGLALIARDIASGKRSIL 326 (332)
T ss_pred ecCCceEEEecccccccchhhHHHHHHHHHHHHHh--hcCchhhhhhhHHHHHHHHcCcccee
Confidence 456888999997666555 66677665533322 23445689999998876654444443
No 315
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=26.46 E-value=1.7e+02 Score=36.22 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=37.1
Q ss_pred CcceEEEecCccChHHHHHHHHHhc---ccccccCC---CcchhhHhHHHHhhhhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~---~p~~ava~GAa~~a~~l 383 (1242)
.++.|+|+||.+.-.++++.|.+.+ +.++..+. -.|.+++.|+|.+....
T Consensus 245 g~~~lvlsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~~~~D~g~~ia~a~~~~~~ 300 (535)
T PRK09605 245 GKDEVLLVGGVAANNRLREMLKEMCEERGADFYVPEPRFCGDNGAMIAWLGLLMYK 300 (535)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCccccchHHHHHHHHHHHHH
Confidence 3678999999999999999999665 44555443 34788888887654433
No 316
>PRK09557 fructokinase; Reviewed
Probab=25.69 E-value=1.2e+02 Score=34.12 Aligned_cols=47 Identities=19% Similarity=0.277 Sum_probs=30.3
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc---------cccccCCcchhhhhhHHHhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK---------EVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~---------~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+++.|+|.||.++.+.+...+++.+.. ++..+.-.+.+.++|||...
T Consensus 244 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 299 (301)
T PRK09557 244 DPDVIVLGGGMSNVDRLYPTLPALLKQYVFGGECETPVRKALHGDSSGVRGAAWLW 299 (301)
T ss_pred CCCEEEEcCcccchHHHHHHHHHHHHHHhcccccCCeEEEcccCCchhhhhhhHhh
Confidence 478888888888776665555554421 23333445678899998754
No 317
>TIGR02707 butyr_kinase butyrate kinase. This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism.
Probab=25.54 E-value=1.7e+02 Score=33.82 Aligned_cols=65 Identities=20% Similarity=0.161 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc--ccc--cccCCcchhhhhhHH
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE--KEV--KKDINPDEAVAVGAS 1017 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~--~~v--~~~~~p~~aVa~GAa 1017 (1242)
++....++...|-......+ .++|.|++.||-+..+.+.+.+.+.+. .++ +...+-.++.|.||.
T Consensus 272 ~d~~~~~la~~Ia~l~~~l~---g~pD~IV~gGGI~e~~~l~~~I~~~l~~~a~v~~~pg~~e~~ala~ga~ 340 (351)
T TIGR02707 272 LDAMAYQIAKEIGKMAVVLK---GKVDAIVLTGGLAYSKYFVSEIIKRVSFIAPVLVYPGEDEMEALAEGAL 340 (351)
T ss_pred HHHHHHHHHHHHHHHHHHhC---CCCCEEEEcchhhcCHHHHHHHHHHHHhhCCEEEeCCcHHHHHHHHhHH
Confidence 33444444444444443321 158999999999998888888888874 233 333444567788874
No 318
>PLN02405 hexokinase
Probab=24.74 E-value=1.3e+02 Score=36.54 Aligned_cols=54 Identities=19% Similarity=0.146 Sum_probs=33.1
Q ss_pred HHHHHHHHHHcCC--CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEE
Q psy5911 152 RQATKDAGKIAGL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEI 208 (1242)
Q Consensus 152 r~~~~~Aa~~AGl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 208 (1242)
.+.+.+|...-|+ ++..++|+.++..++..+... ...+-+=+|.||=-+-+-+.
T Consensus 208 v~lL~~Al~r~~l~v~v~AlvNDTVGTL~a~aY~~~---~~~iG~IlGTGtNacY~E~~ 263 (497)
T PLN02405 208 VGELTKAMERVGLDMRVSALVNDTIGTLAGGRYYNP---DVVAAVILGTGTNAAYVERA 263 (497)
T ss_pred HHHHHHHHHHcCCCceEEEEEecCHHHHHHhhcCCC---CceEEEEEeCCeeeEEEeec
Confidence 3445555555555 568899999998887665432 23333457877655554433
No 319
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=24.60 E-value=1.6e+02 Score=33.87 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh
Q psy5911 956 KSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF 998 (1242)
Q Consensus 956 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f 998 (1242)
-+.+.+..+++.. .+..++++||-+...++|+++++..
T Consensus 250 ~L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~ 287 (345)
T PTZ00340 250 MLVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMA 287 (345)
T ss_pred HHHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 3344444555433 4678999999999999999999987
No 320
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=24.05 E-value=1.4e+03 Score=27.99 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=55.5
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHH-HHHHhhhcccccccC-CcchhhhhhH
Q psy5911 939 VKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQ-KMVSEFFEKEVKKDI-NPDEAVAVGA 1016 (1242)
Q Consensus 939 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~-~~l~~~f~~~v~~~~-~p~~aVa~GA 1016 (1242)
.+..-.++-..++-.+++++..+-.-+.+.. ..+.+.+.||.+..-... +.+.+-+...+...+ -.|...|.||
T Consensus 254 ~~~~~~diAasaQ~~lE~l~l~~~~~~~~~~----g~~~L~~AGGVAlNv~~N~~~l~~~~f~dlfV~Pa~gD~G~AvGA 329 (555)
T COG2192 254 STERAADIAASAQAYLEELVLEMLRYLREET----GEDNLALAGGVALNVKANGKLLRRGLFEDLFVQPAMGDAGLAVGA 329 (555)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHh----CccceEEccceeeeeeehHhHhhcccCceeEecCCCCCcchHHHH
Confidence 3444556666667777777666655555432 156799999998877666 667776666665444 4567899999
Q ss_pred HHhhhhhc
Q psy5911 1017 SVQAGVLS 1024 (1242)
Q Consensus 1017 a~~a~~l~ 1024 (1242)
|+++....
T Consensus 330 Al~~~~~~ 337 (555)
T COG2192 330 ALAVKREL 337 (555)
T ss_pred HHHHHHHh
Confidence 99886543
No 321
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=23.99 E-value=1.7e+02 Score=33.65 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc
Q psy5911 315 SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF 358 (1242)
Q Consensus 315 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f 358 (1242)
+-+.+.+.++++.. .++.++++||-+.-.+||+.|++..
T Consensus 249 ~~L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~ 287 (345)
T PTZ00340 249 AMLVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMA 287 (345)
T ss_pred HHHHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 33344445555433 4678999999999999999999887
No 322
>KOG1794|consensus
Probab=23.99 E-value=2.1e+02 Score=31.59 Aligned_cols=81 Identities=23% Similarity=0.216 Sum_probs=43.7
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC--cceEEEecCccCh-HHHHHHHHHhc----ccccccCCCcchhhH
Q psy5911 301 ITRSKLESLVEDLISKSLKPCEVALNDAKIDKSK--ISEIILVGGQTRM-PLVQKMVSEFF----EKEVKKDINPDEAVA 373 (1242)
Q Consensus 301 itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~--i~~ViLvGG~s~i-p~v~~~l~~~f----~~~~~~~~~p~~ava 373 (1242)
+.++-|.+.-..+- ..|..+|.+......+ .=.|++|||.-.+ ..+++-..... +.+-.....|.++-|
T Consensus 232 ~~~~ifr~Ag~~Lg----~~V~aVl~~l~~~~k~g~~l~Iv~vG~V~~Sw~~l~~Gfl~sls~~~~f~~~~l~~~k~ssA 307 (336)
T KOG1794|consen 232 LSAEIFRNAGETLG----RHVVAVLPQLPPTLKKGKTLPIVCVGGVFDSWDLLQEGFLDSLSDTRGFERVELYRPKESSA 307 (336)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHhhcCchhcccCcceEEEEcchhhHHHHHHHHHHHHhhcccCccceEEEeecccch
Confidence 44555554443333 3344444433322211 3359999996443 34444332222 122234567889999
Q ss_pred hHHHHhhhhhcC
Q psy5911 374 VGASVQAGVLSG 385 (1242)
Q Consensus 374 ~GAa~~a~~l~~ 385 (1242)
.|||+.|+.+.+
T Consensus 308 vgAA~laa~~~~ 319 (336)
T KOG1794|consen 308 VGAAILAASLDN 319 (336)
T ss_pred HHHHHHhhhhcc
Confidence 999999987654
No 323
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=23.99 E-value=1.4e+02 Score=24.54 Aligned_cols=30 Identities=13% Similarity=0.278 Sum_probs=26.7
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHcCCcee
Q psy5911 778 KAVITVPAYFNDSQRQATKDAGKIAGLEVL 807 (1242)
Q Consensus 778 ~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~ 807 (1242)
.-.++.|+.+++.+|+.+...|...||...
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la~~lGL~~~ 46 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLASRLGLNHV 46 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHcCCceE
Confidence 567788999999999999999999999763
No 324
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional
Probab=23.99 E-value=2.5e+02 Score=31.68 Aligned_cols=47 Identities=15% Similarity=0.239 Sum_probs=31.1
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc---------cccccCCcchhhhhhHHHhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK---------EVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~---------~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+++.|+|-||.+..|.+.+.+++.+.. ++....-.+.+.++|||..+
T Consensus 245 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 300 (303)
T PRK13310 245 DPHLVVLGGGLSNFDAIYEQLPKRLPRHLLPVARVPRIEKARHGDAGGVRGAAFLH 300 (303)
T ss_pred CCCEEEECCcccChHHHHHHHHHHHHHHhcccccCceEEEcccCchHHHHhHHHHh
Confidence 578888888877666666666555521 23334455678899998875
No 325
>KOG1794|consensus
Probab=23.94 E-value=2.2e+02 Score=31.42 Aligned_cols=50 Identities=30% Similarity=0.323 Sum_probs=32.3
Q ss_pred ceEEEecCcCch-HHHHHHHHhhh----cccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 976 SEIILVGGQTRM-PLVQKMVSEFF----EKEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 976 ~~ViLvGG~s~i-p~v~~~l~~~f----~~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
=.|++|||.-.+ ..+++-..... +.+-.....|.+.-|.|||++|+.+.+
T Consensus 265 l~Iv~vG~V~~Sw~~l~~Gfl~sls~~~~f~~~~l~~~k~ssAvgAA~laa~~~~ 319 (336)
T KOG1794|consen 265 LPIVCVGGVFDSWDLLQEGFLDSLSDTRGFERVELYRPKESSAVGAAILAASLDN 319 (336)
T ss_pred ceEEEEcchhhHHHHHHHHHHHHhhcccCccceEEEeecccchHHHHHHhhhhcc
Confidence 359999996543 34444333222 122344668899999999999987653
No 326
>PRK05082 N-acetylmannosamine kinase; Provisional
Probab=23.65 E-value=2.8e+02 Score=31.06 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=31.1
Q ss_pred CcceEEEecCccChHHHHHHHHHhcc-------cccccCCCcchhhHhHHHHhhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFE-------KEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~-------~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
+++.|+|.|+.+..+.+-+.+++.+. .++..+.....+.+.|||..+.
T Consensus 233 dpe~IvlgG~~~~~~~~~~~i~~~l~~~~~~~~~~i~~s~~~~~~~~~GAa~~~~ 287 (291)
T PRK05082 233 DCQCVVLGGSVGLAEGYLELVQAYLAQEPAIYHVPLLAAHYRHDAGLLGAALWAQ 287 (291)
T ss_pred CCCEEEEcCccccHHHHHHHHHHHHHhcccccCCeEEECccCCchhhhhHHHHhc
Confidence 46789998887766655555655542 1233344557788999998753
No 327
>PLN03173 chalcone synthase; Provisional
Probab=23.02 E-value=2.1e+02 Score=33.75 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhccccc
Q psy5911 312 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEV 362 (1242)
Q Consensus 312 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~~ 362 (1242)
...+-..+.++++|++++++.++||.|+.+..+. ..|.+--.|.+.+|...
T Consensus 101 ~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~ 152 (391)
T PLN03173 101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRS 152 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCc
Confidence 4445556778999999999999999998876544 58999999999998653
No 328
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=23.00 E-value=1.2e+02 Score=28.28 Aligned_cols=44 Identities=23% Similarity=0.298 Sum_probs=30.9
Q ss_pred EEEEEEEcCC-eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhh
Q psy5911 1113 IEVSFDLDAN-GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELN 1163 (1242)
Q Consensus 1113 i~v~~~~d~~-g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~ 1163 (1242)
..+.|.+|.+ |.+.|++.|..||+.. ..++++++-++.+...++
T Consensus 55 ~~l~F~vde~~~~~vVkViD~~T~eVI-------RqIP~Ee~l~l~~~l~e~ 99 (107)
T PF03646_consen 55 TSLRFSVDEESGRVVVKVIDKETGEVI-------RQIPPEELLDLAKRLREL 99 (107)
T ss_dssp --EEEEEEEETTEEEEEEEETTT-SEE-------EEE-HHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCcEEEEEEECCCCcEE-------EeCCcHHHHHHHHHHHHH
Confidence 5688999975 8899999999999863 247788887776665543
No 329
>PLN02377 3-ketoacyl-CoA synthase
Probab=22.62 E-value=2e+02 Score=34.96 Aligned_cols=55 Identities=7% Similarity=0.151 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEE-ecCccChHHHHHHHHHhcccc
Q psy5911 307 ESLVEDLISKSLKPCEVALNDAKIDKSKISEIIL-VGGQTRMPLVQKMVSEFFEKE 361 (1242)
Q Consensus 307 e~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViL-vGG~s~ip~v~~~l~~~f~~~ 361 (1242)
+...++...-+...++++|+++++++++||.|+. +.+....|.+-.+|.+.+|..
T Consensus 166 ~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr 221 (502)
T PLN02377 166 AAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 221 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCC
Confidence 3333444444567788899999999999999987 445556899999999999864
No 330
>TIGR02707 butyr_kinase butyrate kinase. This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism.
Probab=22.60 E-value=2.1e+02 Score=33.09 Aligned_cols=44 Identities=25% Similarity=0.257 Sum_probs=32.3
Q ss_pred CcceEEEecCccChHHHHHHHHHhcc--cccc--cCCCcchhhHhHHH
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFE--KEVK--KDINPDEAVAVGAS 377 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~--~~~~--~~~~p~~ava~GAa 377 (1242)
++|.|++.||-+..+.+.+.+.+.+. .++. -..+-.++.|.||.
T Consensus 293 ~pD~IV~gGGI~e~~~l~~~I~~~l~~~a~v~~~pg~~e~~ala~ga~ 340 (351)
T TIGR02707 293 KVDAIVLTGGLAYSKYFVSEIIKRVSFIAPVLVYPGEDEMEALAEGAL 340 (351)
T ss_pred CCCEEEEcchhhcCHHHHHHHHHHHHhhCCEEEeCCcHHHHHHHHhHH
Confidence 58899999999998888888888873 2332 23344567888874
No 331
>PLN00130 succinate dehydrogenase (SDH3); Provisional
Probab=22.58 E-value=12 Score=37.04 Aligned_cols=21 Identities=33% Similarity=0.477 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECCe
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGK 24 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~ 24 (1242)
-++|+|+||+|++++..++.+
T Consensus 58 d~~g~~~gt~n~~~~~~e~~k 78 (213)
T PLN00130 58 DILGTGLGTNNAIREEREKSK 78 (213)
T ss_pred ceeccCCCcchHHHHHHhccc
Confidence 479999999999998876544
No 332
>PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2.7.1.2 from EC are found in invertebrates and microorganisms and are highly specific for glucose. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP [].; GO: 0004340 glucokinase activity, 0005524 ATP binding, 0006096 glycolysis, 0051156 glucose 6-phosphate metabolic process; PDB: 1SZ2_B 1Q18_B 2Q2R_B.
Probab=22.34 E-value=7.3e+02 Score=28.23 Aligned_cols=197 Identities=17% Similarity=0.198 Sum_probs=92.2
Q ss_pred HHcCCceeeeechhHHHHHHccCC-----------CCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEec-CCCC
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLD-----------KKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTN-GDTF 867 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~-----------~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~-~~~~ 867 (1242)
+..|++.+.+||+=+|.|++...- ........+|+-.|.| +-++.+--.. ....++++. |...
T Consensus 88 ~~lg~~~v~liNDfeA~a~gl~~L~~~~l~~l~~g~~~~~~~~~Vig~GTG-LG~a~l~~~~----~~~~v~~sEgGH~~ 162 (316)
T PF02685_consen 88 QRLGIPRVRLINDFEAQAYGLPALDPEDLVTLQPGEPDPGGPRAVIGPGTG-LGVALLVPDG----DGYYVLPSEGGHVD 162 (316)
T ss_dssp CCCT-TCEEEEEHHHHHHHHHHHHHHCCECCHCCEESSTTS-EEEEEESSS-EEEEEEEEET----TEEEEEEE-GGGSB
T ss_pred HHhCCceEEEEcccchheeccCCCCHHHeeeccCCCCCCCCcEEEEEcCCC-cEEEEEEecC----CceEeCCCcccccc
Confidence 356888999999999998775110 1124566788777754 5555554443 344466555 3333
Q ss_pred CCc-hHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHH
Q psy5911 868 LGG-EDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKL 946 (1242)
Q Consensus 868 lGG-~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~f 946 (1242)
+.- .+.+..|.+++.+++..-.-.+ --+-+-..+|.+.....+.. +.....- -.|++.-.
T Consensus 163 fap~~~~e~~l~~~l~~~~~~vs~E~-vlSG~GL~~ly~~l~~~~~~----~~~~~~~--------------~~I~~~A~ 223 (316)
T PF02685_consen 163 FAPRTDEEAELLRFLRRRYGRVSVER-VLSGRGLENLYRFLAGERGA----EPPLLSA--------------AEISAAAL 223 (316)
T ss_dssp ---SSHHHHHHHHHHHHHCTS-BHHH-CSSHHHHHHHHHHHHCCTT------S----H--------------HHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCceeEe-ecchhhHHHHHHHHHhccCC----CCCCCCH--------------HHHHHHHH
Confidence 332 5677889999988873211111 11223333333332221100 0000000 01222222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chH-HHH-HHHHhhh-cc----------cccccCCcc
Q psy5911 947 ---ESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMP-LVQ-KMVSEFF-EK----------EVKKDINPD 1009 (1242)
Q Consensus 947 ---e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip-~v~-~~l~~~f-~~----------~v~~~~~p~ 1009 (1242)
..++...++.....+-+...+.-+...--..|+|.||-+ +++ .++ +.+.+.| .+ ++....++
T Consensus 224 ~~~d~~a~~al~~f~~~lg~~agdlaL~~~a~gGvyiaGGI~~~~~~~l~~~~F~~~F~~kg~~~~~l~~iPv~li~~~- 302 (316)
T PF02685_consen 224 EGGDPLAREALDLFARILGRVAGDLALTFLARGGVYIAGGIAPRLLPLLDESAFREAFEDKGRMSDLLEDIPVYLITDP- 302 (316)
T ss_dssp CT--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEE-TTGGGGHHHHHCSSHHHHHH--GGGHHHHTT--EEEE--S-
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeEEEecchhhHHHHHcChhHHHHHHhccCCcHHHHhcCcEEEEeCC-
Confidence 234455555555555555544433333356799999975 333 333 1233334 11 23333343
Q ss_pred hhhhhhHHHhhh
Q psy5911 1010 EAVAVGASVQAG 1021 (1242)
Q Consensus 1010 ~aVa~GAa~~a~ 1021 (1242)
.+.-.|||.++.
T Consensus 303 ~~gL~Gaa~~a~ 314 (316)
T PF02685_consen 303 DAGLLGAAAYAR 314 (316)
T ss_dssp -HHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 467788888764
No 333
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=22.32 E-value=2.5e+02 Score=33.18 Aligned_cols=55 Identities=27% Similarity=0.283 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcc
Q psy5911 946 LESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK 1000 (1242)
Q Consensus 946 fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~ 1000 (1242)
++++-+-+++.+..++.+.+.++++.+++|..+.++|-++..-++...=-+.++.
T Consensus 55 ~~~L~~~i~~~i~~li~~l~~~~gi~~~~I~~i~i~GNt~M~hLllGl~~~~L~~ 109 (412)
T PF14574_consen 55 LEELQRLIRETINELIEELLEKAGISPEDIYEIVIVGNTTMLHLLLGLDPEGLGR 109 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--GGGEEEEEEEE-HHHHHHHHT---GGGSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEEEEecHHHHHHHcCCChHHhcc
Confidence 3445556667788889999999999999999999999777666655443344443
No 334
>PF07066 DUF3882: Lactococcus phage M3 protein; InterPro: IPR009773 This family consists of several Lactococcus bacteriophage 712, middle-3 (M3) proteins of around 160 residues in length. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The function of this family is unknown.
Probab=22.15 E-value=1.3e+02 Score=29.31 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=19.6
Q ss_pred CCeEEEEEcCccc-----eEEEEEECCe
Q psy5911 2 YCKIIGIDLGTTN-----SCVAVLNNGK 24 (1242)
Q Consensus 2 ~~~vvGID~GTt~-----s~va~~~~g~ 24 (1242)
|+.+++|||-||+ +.-|+.+++.
T Consensus 1 ~~~~LslD~STs~~~~~gTG~A~~~~~~ 28 (159)
T PF07066_consen 1 MKKVLSLDFSTSSKKGEGTGWAFFKGSD 28 (159)
T ss_pred CCeeEEEEEecccCCCCCceeEEecCCe
Confidence 6789999999998 8888887554
No 335
>PLN02914 hexokinase
Probab=22.08 E-value=1.6e+02 Score=35.62 Aligned_cols=55 Identities=20% Similarity=0.186 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCC--CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEE
Q psy5911 152 RQATKDAGKIAGL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIA 209 (1242)
Q Consensus 152 r~~~~~Aa~~AGl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~ 209 (1242)
.+.+.+|.+.-|+ ++..++|+.+|..++..+... ...+-+=+|.||=-+.+-++.
T Consensus 208 v~lL~~Al~r~~l~v~v~AivNDTVGTL~a~aY~~~---~~~iGlIlGTGtNacY~E~~~ 264 (490)
T PLN02914 208 VACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDD---DVMVAVILGTGTNACYVERTD 264 (490)
T ss_pred HHHHHHHHHHcCCCceEEEEEEcCHHHHHhhhcCCC---CceEEEEEECCeeeEEEeecc
Confidence 3444444444444 678899999998877655432 233333578776555554443
No 336
>PRK13318 pantothenate kinase; Reviewed
Probab=21.75 E-value=89 Score=34.44 Aligned_cols=20 Identities=35% Similarity=0.750 Sum_probs=17.8
Q ss_pred EEEEEcCccceEEEEEECCe
Q psy5911 5 IIGIDLGTTNSCVAVLNNGK 24 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g~ 24 (1242)
+++||+|.|+++++++++++
T Consensus 2 iL~IDIGnT~iK~al~d~g~ 21 (258)
T PRK13318 2 LLAIDVGNTNTVFGLYEGGK 21 (258)
T ss_pred EEEEEECCCcEEEEEEECCE
Confidence 68999999999999998654
No 337
>PRK12397 propionate kinase; Reviewed
Probab=21.66 E-value=8.7e+02 Score=28.59 Aligned_cols=44 Identities=7% Similarity=0.100 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhh
Q psy5911 951 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 998 (1242)
Q Consensus 951 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 998 (1242)
+-++.++.+.|-...... ..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 302 d~f~yri~k~IGa~~a~l----ggvDaiVFTGGIGEns~~vR~~ic~~L 346 (404)
T PRK12397 302 TLFAERIRATIGSYIMQM----GGLDALVFTGGIGENSARARSAVCHNL 346 (404)
T ss_pred HHHHHHHHHHHHHHHHHh----CCCCEEEECCchhhCCHHHHHHHHhhh
Confidence 334445555555444432 3599999999966 6889999987655
No 338
>PRK09557 fructokinase; Reviewed
Probab=21.55 E-value=1.7e+02 Score=33.10 Aligned_cols=43 Identities=19% Similarity=0.320 Sum_probs=27.1
Q ss_pred cCCCeeeeechHHHHHHHhccC-CCCCCcEEEEEEeCCcceeeeEE
Q psy5911 162 AGLEVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
.|++ +.+.|+..|+|++-... .....++++.+.+|.| +-.+++
T Consensus 96 ~~~p-v~~~NDa~aaA~aE~~~g~~~~~~~~~~l~igtG-iG~giv 139 (301)
T PRK09557 96 LNRE-VRLANDANCLAVSEAVDGAAAGKQTVFAVIIGTG-CGAGVA 139 (301)
T ss_pred HCCC-EEEccchhHHHHHHHHhcccCCCCcEEEEEEccc-eEEEEE
Confidence 4775 57999999999875332 2223456777778754 344444
No 339
>PLN03172 chalcone synthase family protein; Provisional
Probab=21.48 E-value=2.3e+02 Score=33.47 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhccccc
Q psy5911 311 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEV 362 (1242)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~~ 362 (1242)
+...+-..+.++++|++++++.++||.|+++..+. .+|.+--.|.+.+|.+.
T Consensus 100 ~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~ 152 (393)
T PLN03172 100 VEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKP 152 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCC
Confidence 34445556778999999999999999998776555 69999999999998643
No 340
>PLN02377 3-ketoacyl-CoA synthase
Probab=21.44 E-value=2.2e+02 Score=34.61 Aligned_cols=56 Identities=7% Similarity=0.164 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEE-ecCcCchHHHHHHHHhhhccc
Q psy5911 946 LESLVEDLISKSLKPCEVALNDAKIDKSKISEIIL-VGGQTRMPLVQKMVSEFFEKE 1001 (1242)
Q Consensus 946 fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViL-vGG~s~ip~v~~~l~~~f~~~ 1001 (1242)
++...++...=+...++++|+++++++.+||.|+. +.+....|.+-.+|.+.+|.+
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr 221 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 221 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCC
Confidence 33344444445667788899999999999999987 444446899999999999864
No 341
>PLN03170 chalcone synthase; Provisional
Probab=21.38 E-value=2.1e+02 Score=33.91 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhccccc
Q psy5911 311 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEV 362 (1242)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~~ 362 (1242)
+...+-..+.++++|++++++.++|+.|+++-.+. ..|.+.-.|.+.+|.+.
T Consensus 104 ~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~ 156 (401)
T PLN03170 104 VEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRP 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCc
Confidence 34445567788999999999999999998776544 69999999999998643
No 342
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=21.33 E-value=57 Score=31.65 Aligned_cols=17 Identities=35% Similarity=0.501 Sum_probs=15.0
Q ss_pred EEEEcCccceEEEEEEC
Q psy5911 6 IGIDLGTTNSCVAVLNN 22 (1242)
Q Consensus 6 vGID~GTt~s~va~~~~ 22 (1242)
+|||+|+..+.+|+.+.
T Consensus 1 laiD~G~kriGvA~~d~ 17 (130)
T TIGR00250 1 LGLDFGTKSIGVAGQDI 17 (130)
T ss_pred CeEccCCCeEEEEEECC
Confidence 59999999999998754
No 343
>PLN03173 chalcone synthase; Provisional
Probab=21.32 E-value=2.4e+02 Score=33.26 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhhcccc
Q psy5911 951 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEV 1002 (1242)
Q Consensus 951 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~v 1002 (1242)
+...+=..+.++++|+++++++.+||.|+.+..+. ..|.+--.|.+.+|.+.
T Consensus 100 ~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~ 152 (391)
T PLN03173 100 VEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRS 152 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCc
Confidence 34445556778999999999999999998877554 58999999999998653
No 344
>PRK12440 acetate kinase; Reviewed
Probab=21.13 E-value=1.4e+03 Score=26.91 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHH-HHHHHHhhh
Q psy5911 951 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPL-VQKMVSEFF 998 (1242)
Q Consensus 951 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~-v~~~l~~~f 998 (1242)
+-++.++.+.|-......+ .+|.|+++||-+.... +++.+.+.+
T Consensus 301 d~f~yri~k~Ig~~~a~l~----gvDaiVFTgGIGen~~~vr~~i~~~l 345 (397)
T PRK12440 301 EVFTYRVAKYIASYLAALD----SLDGIIFTGGIGENSLPIRREILKNL 345 (397)
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCEEEECCccccCcHHHHHHHHhhh
Confidence 3344555555554444333 5999999999887655 999998766
No 345
>PTZ00107 hexokinase; Provisional
Probab=20.87 E-value=1.5e+02 Score=35.74 Aligned_cols=161 Identities=14% Similarity=0.072 Sum_probs=0.0
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEec--------CCcEEEcHHHHHhhhhCCCchhhhchhhh
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTE--------DNRIIVGLPAKRQAITNPNNTLYAIKRLI 74 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~--------~~~~~vG~~A~~~~~~~~~~~~~~~k~~l 74 (1242)
+..++||||.||..|+.++=+.-..+...+....+|..+--.. .+.-+|.+-|.. +..|..--
T Consensus 74 G~fLAlDlGGTN~RV~~V~L~g~~~~~~~~~~~~ip~~~~~~~~~~~~k~~t~~~lFd~IA~~---------i~~fl~~~ 144 (464)
T PTZ00107 74 GVYYAIDFGGTNFRAVRVSLRGGGKMERTQSKFSLPKSALLGEKGLLDKKATATDLFDHIAKS---------IKKMMEEN 144 (464)
T ss_pred ceEEEEecCCceEEEEEEEeCCCCceeeEEEEEeCCHHHhccccccccccCCHHHHHHHHHHH---------HHHHHHhc
Q ss_pred CCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecCh-----HHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCH
Q psy5911 75 GRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAP-----PQISAEILKKMKSTAETFLNEKIEKAVITVPAYFND 149 (1242)
Q Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~ 149 (1242)
+........-...-.+.|.+....-+...+.--.+.|.. .++...-+..+.+.+-...+.++
T Consensus 145 ~~~~~~~~~l~lGfTFSFP~~Q~si~~g~Li~WtKGF~~~~~~~~~v~G~DV~~lL~~Al~r~~l~v------------- 211 (464)
T PTZ00107 145 GDPEDLNKPVPVGFTFSFPCTQLSVNNAILIDWTKGFETGRATNDPVEGKDVGELLNDAFKRNNVPA------------- 211 (464)
T ss_pred cccccccccccceeEEeeeeecccCCceEEEEeccceeeccCCCCCccCchHHHHHHHHHHHcCCCc-------------
Q ss_pred HHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCC-CCCCcEEEEEEeCCcc
Q psy5911 150 SQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDK-KPDDRIIVVYDLGGGT 200 (1242)
Q Consensus 150 ~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~-~~~~~~vlV~D~GggT 200 (1242)
+++.++|+.+|..++..+.. ...+...+-+=+|-||
T Consensus 212 ---------------~v~AivNDTVgTL~a~ay~~~~~~~~~~iGlIlGTG~ 248 (464)
T PTZ00107 212 ---------------NVVAVLNDTVGTLISCAYQKPKNTPPCQVGVIIGTGS 248 (464)
T ss_pred ---------------eEEEEEEcCHHHHHHHHhcCcCCCCCceEEEEEeccc
No 346
>PLN02596 hexokinase-like
Probab=20.68 E-value=2.3e+02 Score=34.27 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=32.9
Q ss_pred HHHHHHHHHcCC--CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEE
Q psy5911 153 QATKDAGKIAGL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIA 209 (1242)
Q Consensus 153 ~~~~~Aa~~AGl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~ 209 (1242)
+.+.+|...-|+ +++.++|+.+|..++..+... ...+-+=+|.||=-+.+-++.
T Consensus 209 ~lL~~Al~r~~l~v~v~AivNDTVgTL~a~aY~~~---~~~iG~I~GTGtNacY~E~~~ 264 (490)
T PLN02596 209 NDINRALEKHGLKIRVFALVDDTIGNLAGGRYYNK---DTVAAVTLGMGTNAAYVEPAQ 264 (490)
T ss_pred HHHHHHHHhcCCCceEEEEEEcCHHHHHhhhcCCC---CeEEEEEEecccceEEEEEcc
Confidence 334455544454 678899999998887765432 333333478887555554443
No 347
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=20.66 E-value=1.8e+02 Score=23.98 Aligned_cols=31 Identities=13% Similarity=0.248 Sum_probs=26.8
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHHHcCCCee
Q psy5911 137 EKAVITVPAYFNDSQRQATKDAGKIAGLEVL 167 (1242)
Q Consensus 137 ~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~ 167 (1242)
..-.++-|+.++..+|+.+...|...||...
T Consensus 16 ~~~eL~Fp~~ls~~eRriih~la~~lGL~~~ 46 (60)
T cd02639 16 MRDELAFPSSLSPAERRIVHLLASRLGLNHV 46 (60)
T ss_pred CceEEEcCCCCCHHHHHHHHHHHHHcCCceE
Confidence 3556778999999999999999999999653
No 348
>PRK13321 pantothenate kinase; Reviewed
Probab=20.61 E-value=95 Score=34.14 Aligned_cols=19 Identities=32% Similarity=0.543 Sum_probs=17.4
Q ss_pred EEEEEcCccceEEEEEECC
Q psy5911 5 IIGIDLGTTNSCVAVLNNG 23 (1242)
Q Consensus 5 vvGID~GTt~s~va~~~~g 23 (1242)
+++||+|.|++++|+++++
T Consensus 2 iL~IDIGnT~ik~gl~~~~ 20 (256)
T PRK13321 2 LLLIDVGNTNIKLGVFDGD 20 (256)
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 6899999999999999866
No 349
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional
Probab=20.49 E-value=1.1e+03 Score=29.85 Aligned_cols=22 Identities=32% Similarity=0.510 Sum_probs=18.2
Q ss_pred HHHHcCCceeeeechhHHHHHH
Q psy5911 798 AGKIAGLEVLRIINEPTAAALA 819 (1242)
Q Consensus 798 Aa~~AGl~~~~li~Ep~AAal~ 819 (1242)
..+..|++++.++|+-.|+|++
T Consensus 101 l~~~~g~~~v~l~ND~~aaA~g 122 (638)
T PRK14101 101 TRRALGFDTLLVVNDFTALAMA 122 (638)
T ss_pred HHHHcCCCeEEEEchHHHHHcC
Confidence 3344688888999999999998
No 350
>PLN03170 chalcone synthase; Provisional
Probab=20.38 E-value=2.3e+02 Score=33.61 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhhcccc
Q psy5911 951 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEV 1002 (1242)
Q Consensus 951 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~v 1002 (1242)
+...+=..+..+++|+++++++++||.|+++-.+. .+|.+--.|.+.+|.+.
T Consensus 104 ~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~ 156 (401)
T PLN03170 104 VEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRP 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCc
Confidence 34445566788999999999999999998777544 69999999999998643
No 351
>PLN03172 chalcone synthase family protein; Provisional
Probab=20.25 E-value=2.5e+02 Score=33.12 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhhcccc
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEV 1002 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~v 1002 (1242)
.+...+=..+.++++|+++++++++||.|+++..+. .+|.+--.|.+.+|.+.
T Consensus 99 ~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~ 152 (393)
T PLN03172 99 VVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKP 152 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCC
Confidence 344445556778999999999999999998777555 69999999999998643
Done!