Query psy5911
Match_columns 1242
No_of_seqs 1009 out of 5818
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 21:37:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5911.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5911hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 2.2E-99 8E-104 932.3 69.8 601 642-1242 1-601 (605)
2 2kho_A Heat shock protein 70; 100.0 2.2E-96 7E-101 905.7 60.0 600 643-1242 2-601 (605)
3 4b9q_A Chaperone protein DNAK; 100.0 1E-93 3.5E-98 882.0 72.3 543 2-544 1-543 (605)
4 3d2f_A Heat shock protein homo 100.0 2.2E-92 7.4E-97 874.1 63.7 587 644-1242 3-623 (675)
5 2kho_A Heat shock protein 70; 100.0 9.4E-91 3.2E-95 855.6 59.0 543 2-544 1-543 (605)
6 3d2f_A Heat shock protein homo 100.0 4.7E-86 1.6E-90 817.5 63.9 531 2-544 1-560 (675)
7 1yuw_A Heat shock cognate 71 k 100.0 2.8E-86 9.5E-91 808.5 54.7 530 2-541 3-543 (554)
8 1yuw_A Heat shock cognate 71 k 100.0 1.2E-86 4.2E-91 811.6 50.4 542 640-1191 1-553 (554)
9 2v7y_A Chaperone protein DNAK; 100.0 7.7E-83 2.6E-87 773.1 56.0 508 2-540 1-508 (509)
10 2v7y_A Chaperone protein DNAK; 100.0 9.6E-81 3.3E-85 754.7 53.0 508 643-1181 2-509 (509)
11 1dkg_D Molecular chaperone DNA 100.0 4.9E-59 1.7E-63 548.9 42.5 383 2-384 1-383 (383)
12 3i33_A Heat shock-related 70 k 100.0 1E-58 3.6E-63 550.2 44.8 375 1-385 21-403 (404)
13 3qfu_A 78 kDa glucose-regulate 100.0 1.9E-57 6.6E-62 538.4 44.4 372 3-384 18-394 (394)
14 4gni_A Putative heat shock pro 100.0 7.3E-57 2.5E-61 534.6 40.7 370 3-384 13-402 (409)
15 1dkg_D Molecular chaperone DNA 100.0 5.3E-56 1.8E-60 523.0 40.6 382 643-1024 2-383 (383)
16 3i33_A Heat shock-related 70 k 100.0 1.6E-55 5.6E-60 522.8 41.8 371 645-1025 25-403 (404)
17 3qfu_A 78 kDa glucose-regulate 100.0 2.3E-54 8E-59 511.9 42.2 371 644-1024 19-394 (394)
18 4gni_A Putative heat shock pro 100.0 7.5E-54 2.6E-58 508.7 38.3 370 644-1025 14-403 (409)
19 1jce_A ROD shape-determining p 100.0 1.7E-39 5.9E-44 376.1 24.9 314 1-384 1-327 (344)
20 4e81_A Chaperone protein DNAK; 100.0 2E-38 6.8E-43 332.8 26.8 212 1031-1242 2-213 (219)
21 1jce_A ROD shape-determining p 100.0 1.4E-36 5E-41 351.5 24.7 314 643-1024 3-327 (344)
22 1u00_A HSC66, chaperone protei 100.0 3.1E-35 1.1E-39 312.7 27.7 210 1033-1242 1-210 (227)
23 3n8e_A Stress-70 protein, mito 100.0 2.1E-31 7.2E-36 269.2 17.6 165 1027-1191 17-181 (182)
24 4e81_A Chaperone protein DNAK; 100.0 2.6E-28 9E-33 256.0 25.7 154 391-544 2-155 (219)
25 3h0x_A 78 kDa glucose-regulate 100.0 4E-29 1.4E-33 246.5 18.1 150 1032-1181 2-152 (152)
26 3dob_A Heat shock 70 kDa prote 100.0 2.4E-29 8.3E-34 247.3 16.1 150 1032-1181 2-152 (152)
27 3dqg_A Heat shock 70 kDa prote 100.0 1.8E-29 6.1E-34 248.0 14.1 150 1032-1181 2-151 (151)
28 3n8e_A Stress-70 protein, mito 100.0 6.1E-28 2.1E-32 243.9 20.3 158 387-544 17-174 (182)
29 3h0x_A 78 kDa glucose-regulate 100.0 5.3E-28 1.8E-32 238.5 15.8 149 392-540 2-151 (152)
30 3dob_A Heat shock 70 kDa prote 100.0 3.1E-28 1.1E-32 239.5 13.7 148 392-539 2-150 (152)
31 3dqg_A Heat shock 70 kDa prote 100.0 2E-28 6.8E-33 240.6 11.7 147 392-538 2-148 (151)
32 4ani_A Protein GRPE; chaperone 99.9 5E-27 1.7E-31 237.6 14.6 144 532-684 67-212 (213)
33 2op6_A Heat shock 70 kDa prote 99.9 1.3E-26 4.4E-31 231.0 16.9 150 1032-1181 2-152 (152)
34 1u00_A HSC66, chaperone protei 99.9 5.8E-25 2E-29 233.7 26.4 152 393-544 1-152 (227)
35 1dkg_A Nucleotide exchange fac 99.9 1.4E-26 4.8E-31 235.1 11.6 134 544-685 58-194 (197)
36 2fsj_A Hypothetical protein TA 99.9 1E-26 3.5E-31 266.7 10.7 231 107-381 91-343 (346)
37 3a6m_A Protein GRPE, HSP-70 co 99.9 1.9E-26 6.5E-31 229.0 9.3 131 544-685 38-168 (177)
38 2op6_A Heat shock 70 kDa prote 99.9 1.7E-25 5.7E-30 222.9 14.1 148 392-539 2-150 (152)
39 2ych_A Competence protein PILM 99.9 2.3E-25 8E-30 261.1 15.2 300 3-364 13-336 (377)
40 3h1q_A Ethanolamine utilizatio 99.9 6.5E-24 2.2E-28 236.8 24.8 206 111-380 67-272 (272)
41 2fxu_A Alpha-actin-1, actin, a 99.9 1.5E-24 5.1E-29 252.8 13.8 298 4-382 6-349 (375)
42 1k8k_A ARP3, actin-like protei 99.9 3.5E-24 1.2E-28 254.1 15.8 308 4-382 6-387 (418)
43 2fsj_A Hypothetical protein TA 99.9 1.3E-24 4.4E-29 249.2 9.9 230 748-1021 92-343 (346)
44 4a2a_A Cell division protein F 99.9 6E-23 2E-27 240.1 23.4 197 151-382 169-393 (419)
45 2ych_A Competence protein PILM 99.9 2.6E-23 9E-28 243.6 14.4 298 645-1004 15-336 (377)
46 3h1q_A Ethanolamine utilizatio 99.9 6.8E-22 2.3E-26 220.4 19.8 204 753-1020 69-272 (272)
47 1q5l_A Chaperone protein DNAK; 99.9 2.1E-22 7.2E-27 194.2 12.5 122 387-508 14-135 (135)
48 1q5l_A Chaperone protein DNAK; 99.9 5.2E-22 1.8E-26 191.4 12.7 122 1027-1148 14-135 (135)
49 2fxu_A Alpha-actin-1, actin, a 99.9 6.3E-22 2.2E-26 230.6 14.8 304 645-1022 7-349 (375)
50 1k8k_A ARP3, actin-like protei 99.9 1.2E-21 4.2E-26 232.2 16.1 242 755-1022 87-387 (418)
51 4a2a_A Cell division protein F 99.8 1.7E-20 5.7E-25 219.4 18.3 197 792-1023 170-394 (419)
52 2zgy_A Plasmid segregation pro 99.8 1E-21 3.6E-26 223.6 7.3 226 109-380 72-319 (320)
53 2zgy_A Plasmid segregation pro 99.7 3.1E-19 1.1E-23 203.2 5.2 225 750-1020 73-319 (320)
54 1k8k_B ARP2, actin-like protei 99.7 5E-19 1.7E-23 207.0 5.4 213 137-381 105-363 (394)
55 4ehu_A Activator of 2-hydroxyi 99.7 1.8E-17 6.1E-22 184.7 10.6 218 114-384 36-256 (276)
56 1k8k_B ARP2, actin-like protei 99.6 7E-17 2.4E-21 188.8 5.8 214 777-1022 105-364 (394)
57 3js6_A Uncharacterized PARM pr 99.6 3.5E-15 1.2E-19 170.6 16.9 206 137-385 114-339 (355)
58 3qb0_A Actin-related protein 4 99.5 1E-13 3.5E-18 163.1 16.2 179 4-243 24-209 (498)
59 3js6_A Uncharacterized PARM pr 99.5 8.7E-14 3E-18 159.0 13.2 205 778-1025 115-339 (355)
60 3dwl_A Actin-related protein 3 99.5 1.4E-14 4.7E-19 169.3 6.1 253 107-382 95-396 (427)
61 4apw_A ALP12; actin-like prote 99.5 1.1E-14 3.8E-19 165.3 3.7 204 137-383 106-325 (329)
62 4ehu_A Activator of 2-hydroxyi 99.5 3.8E-14 1.3E-18 157.7 7.0 233 739-1024 21-256 (276)
63 3qb0_A Actin-related protein 4 99.3 2.4E-11 8.2E-16 143.0 17.2 178 645-883 25-209 (498)
64 3dwl_A Actin-related protein 3 99.3 1.9E-12 6.4E-17 151.3 5.2 247 753-1022 101-396 (427)
65 4apw_A ALP12; actin-like prote 99.2 4.7E-12 1.6E-16 143.6 6.6 202 777-1022 106-324 (329)
66 4fo0_A Actin-related protein 8 99.1 1.1E-09 3.6E-14 135.9 22.1 109 123-244 179-294 (593)
67 2d0o_A DIOL dehydratase-reacti 99.0 8.9E-11 3.1E-15 133.3 4.1 198 150-381 368-603 (610)
68 1nbw_A Glycerol dehydratase re 99.0 2.8E-10 9.6E-15 130.0 7.3 196 151-380 371-604 (607)
69 2d0o_A DIOL dehydratase-reacti 98.9 6.3E-10 2.2E-14 126.5 4.2 196 792-1021 370-603 (610)
70 1nbw_A Glycerol dehydratase re 98.9 9.2E-10 3.2E-14 125.7 5.0 194 793-1020 373-604 (607)
71 4fo0_A Actin-related protein 8 98.9 4.7E-08 1.6E-12 121.1 20.7 111 761-884 177-294 (593)
72 3lof_A Heat shock 70 kDa prote 98.8 1.6E-08 5.4E-13 94.5 9.5 74 1169-1242 3-81 (113)
73 2p32_A Heat shock 70 kDa prote 98.6 5.8E-08 2E-12 91.6 5.9 73 1170-1242 13-90 (120)
74 1hux_A Activator of (R)-2-hydr 98.5 9E-06 3.1E-10 89.0 21.8 71 309-383 187-257 (270)
75 1ud0_A HSC70, 70 kDa heat-shoc 98.4 3E-07 1E-11 86.0 6.3 70 1173-1242 2-76 (113)
76 4am6_A Actin-like protein ARP8 97.9 3.3E-05 1.1E-09 91.5 11.5 175 114-307 196-380 (655)
77 4am6_A Actin-like protein ARP8 97.9 5.2E-05 1.8E-09 89.9 11.7 124 777-917 222-346 (655)
78 1hux_A Activator of (R)-2-hydr 97.8 0.00017 5.8E-09 78.8 14.2 72 948-1023 186-257 (270)
79 3ll3_A Gluconate kinase; xylul 97.0 0.0077 2.6E-07 72.1 16.5 207 796-1027 219-445 (504)
80 3hz6_A Xylulokinase; xylulose, 96.9 0.007 2.4E-07 72.6 15.0 210 796-1027 223-455 (511)
81 4e1j_A Glycerol kinase; struct 96.6 0.0091 3.1E-07 71.7 12.6 203 801-1028 255-478 (520)
82 3i8b_A Xylulose kinase; strain 96.6 0.0058 2E-07 73.2 10.6 81 942-1026 395-475 (515)
83 2ews_A Pantothenate kinase; PA 96.6 0.025 8.6E-07 61.3 14.4 75 301-380 207-286 (287)
84 2i7n_A Pantothenate kinase 1; 96.3 0.023 8E-07 63.3 12.8 46 335-380 306-358 (360)
85 2ews_A Pantothenate kinase; PA 96.3 0.041 1.4E-06 59.7 13.8 75 941-1020 207-286 (287)
86 2i7n_A Pantothenate kinase 1; 96.1 0.037 1.3E-06 61.7 12.7 46 975-1020 306-358 (360)
87 3l0q_A Xylulose kinase; xlylul 96.0 0.01 3.4E-07 72.1 8.3 85 938-1026 406-493 (554)
88 3ezw_A Glycerol kinase; glycer 95.7 0.019 6.5E-07 69.1 8.9 86 940-1029 370-456 (526)
89 2itm_A Xylulose kinase, xylulo 95.6 0.015 5E-07 69.4 7.4 82 941-1026 356-438 (484)
90 3ifr_A Carbohydrate kinase, FG 95.6 0.023 7.8E-07 68.1 8.9 211 796-1026 225-451 (508)
91 2zf5_O Glycerol kinase; hypert 95.5 0.02 6.8E-07 68.5 8.3 80 942-1026 365-444 (497)
92 3g25_A Glycerol kinase; IDP007 95.5 0.028 9.4E-07 67.3 9.3 83 941-1028 373-457 (501)
93 4bc3_A Xylulose kinase; transf 95.4 0.023 8E-07 68.5 8.5 77 948-1025 408-484 (538)
94 3l0q_A Xylulose kinase; xlylul 95.4 0.026 8.9E-07 68.4 8.9 86 300-386 408-493 (554)
95 3h3n_X Glycerol kinase; ATP-bi 95.3 0.031 1.1E-06 66.9 9.1 199 802-1027 236-455 (506)
96 1t6c_A Exopolyphosphatase; alp 95.3 0.033 1.1E-06 61.8 8.4 78 151-237 99-177 (315)
97 3jvp_A Ribulokinase; PSI-II, N 95.3 0.026 9E-07 68.6 8.2 81 941-1025 409-490 (572)
98 2p3r_A Glycerol kinase; glycer 95.2 0.034 1.2E-06 66.5 9.0 81 942-1027 371-453 (510)
99 3hz6_A Xylulokinase; xylulose, 95.2 0.032 1.1E-06 66.9 8.5 81 302-387 375-455 (511)
100 2itm_A Xylulose kinase, xylulo 95.1 0.028 9.5E-07 67.0 7.6 82 302-386 357-438 (484)
101 2zf5_O Glycerol kinase; hypert 95.0 0.039 1.3E-06 65.9 8.6 80 302-386 365-444 (497)
102 3vgl_A Glucokinase; ROK family 95.0 0.9 3.1E-05 50.5 19.3 43 162-206 96-139 (321)
103 3ll3_A Gluconate kinase; xylul 94.9 0.045 1.5E-06 65.4 8.6 78 302-386 364-444 (504)
104 4bc3_A Xylulose kinase; transf 94.8 0.05 1.7E-06 65.6 8.8 78 307-385 407-484 (538)
105 2d4w_A Glycerol kinase; alpha 94.7 0.055 1.9E-06 64.7 8.7 82 941-1026 372-454 (504)
106 3ezw_A Glycerol kinase; glycer 94.7 0.067 2.3E-06 64.3 9.4 84 301-388 371-455 (526)
107 3g25_A Glycerol kinase; IDP007 94.5 0.044 1.5E-06 65.5 7.3 82 302-387 374-456 (501)
108 2w40_A Glycerol kinase, putati 94.4 0.074 2.5E-06 63.6 8.9 81 942-1026 376-458 (503)
109 2dpn_A Glycerol kinase; thermu 94.4 0.065 2.2E-06 63.9 8.3 80 942-1025 368-448 (495)
110 3i8b_A Xylulose kinase; strain 94.3 0.049 1.7E-06 65.1 7.1 79 302-385 395-474 (515)
111 3ifr_A Carbohydrate kinase, FG 94.3 0.043 1.5E-06 65.6 6.5 80 302-386 371-451 (508)
112 2e2o_A Hexokinase; acetate and 94.3 7.5 0.00026 42.3 26.0 48 334-382 239-287 (299)
113 4e1j_A Glycerol kinase; struct 94.2 0.038 1.3E-06 66.2 5.7 53 334-387 425-477 (520)
114 3h3n_X Glycerol kinase; ATP-bi 94.1 0.052 1.8E-06 64.9 6.8 81 302-386 373-454 (506)
115 2p3r_A Glycerol kinase; glycer 94.1 0.05 1.7E-06 65.1 6.6 81 302-386 371-452 (510)
116 3eno_A Putative O-sialoglycopr 94.1 2.1 7.1E-05 47.7 19.3 68 313-385 233-306 (334)
117 2qm1_A Glucokinase; alpha-beta 94.1 1.9 6.6E-05 47.9 19.5 48 335-382 263-321 (326)
118 3jvp_A Ribulokinase; PSI-II, N 94.1 0.059 2E-06 65.5 7.1 80 302-385 410-490 (572)
119 2ivn_A O-sialoglycoprotein end 93.9 9.5 0.00033 42.2 27.6 63 315-382 230-298 (330)
120 2uyt_A Rhamnulokinase; rhamnos 93.8 0.12 4E-06 61.7 8.8 77 940-1022 361-439 (489)
121 2dpn_A Glycerol kinase; thermu 93.6 0.12 3.9E-06 61.8 8.5 80 302-385 368-448 (495)
122 4db3_A Glcnac kinase, N-acetyl 93.6 5.2 0.00018 44.4 21.8 47 334-380 269-324 (327)
123 3r8e_A Hypothetical sugar kina 93.6 2 6.8E-05 47.7 18.1 47 334-380 260-317 (321)
124 2d4w_A Glycerol kinase; alpha 93.1 0.1 3.4E-06 62.4 6.8 81 302-386 373-454 (504)
125 2w40_A Glycerol kinase, putati 93.0 0.099 3.4E-06 62.5 6.6 80 302-385 376-457 (503)
126 3vov_A Glucokinase, hexokinase 92.3 11 0.00036 41.3 21.5 44 161-206 97-141 (302)
127 2uyt_A Rhamnulokinase; rhamnos 91.9 0.16 5.6E-06 60.4 6.5 78 300-382 361-439 (489)
128 2hoe_A N-acetylglucosamine kin 91.4 12 0.0004 42.4 21.3 47 335-381 315-370 (380)
129 1t6c_A Exopolyphosphatase; alp 91.4 0.24 8.2E-06 54.8 6.6 77 792-877 100-177 (315)
130 3h6e_A Carbohydrate kinase, FG 91.3 0.29 9.8E-06 57.8 7.6 72 947-1023 362-436 (482)
131 3mdq_A Exopolyphosphatase; str 91.1 5.8 0.0002 43.6 17.5 56 792-847 92-149 (315)
132 2ch5_A NAGK protein; transfera 90.7 24 0.00081 39.2 29.9 60 135-200 70-132 (347)
133 3h6e_A Carbohydrate kinase, FG 88.9 0.53 1.8E-05 55.5 7.2 72 307-383 362-436 (482)
134 2ap1_A Putative regulator prot 85.7 32 0.0011 37.7 19.3 43 162-206 120-163 (327)
135 3en9_A Glycoprotease, O-sialog 80.6 56 0.0019 38.8 19.7 183 135-358 72-272 (540)
136 3mdq_A Exopolyphosphatase; str 80.2 2.2 7.7E-05 47.0 6.6 77 152-237 92-170 (315)
137 3cer_A Possible exopolyphospha 78.9 3 0.0001 46.5 7.2 82 152-237 105-191 (343)
138 3cer_A Possible exopolyphospha 78.9 3.2 0.00011 46.3 7.4 82 792-877 105-191 (343)
139 4db3_A Glcnac kinase, N-acetyl 78.5 57 0.0019 35.8 17.6 87 753-846 60-163 (327)
140 3hi0_A Putative exopolyphospha 75.4 5.2 0.00018 47.3 8.2 74 792-875 103-177 (508)
141 3hi0_A Putative exopolyphospha 74.5 4.8 0.00016 47.6 7.6 56 151-207 102-158 (508)
142 3bex_A Type III pantothenate k 72.4 23 0.0008 37.2 11.6 21 4-24 4-24 (249)
143 2e2o_A Hexokinase; acetate and 71.2 1.1E+02 0.0039 32.6 20.7 48 974-1022 239-287 (299)
144 3vgl_A Glucokinase; ROK family 71.1 95 0.0033 33.8 17.0 88 752-847 36-140 (321)
145 1u6z_A Exopolyphosphatase; alp 69.1 5.5 0.00019 47.2 6.5 109 755-877 60-176 (513)
146 1u6z_A Exopolyphosphatase; alp 66.3 5.4 0.00018 47.2 5.6 75 153-237 100-176 (513)
147 2yhx_A Hexokinase B; transfera 66.0 11 0.00037 43.7 7.9 55 150-207 164-220 (457)
148 3eno_A Putative O-sialoglycopr 63.9 15 0.00051 40.7 8.3 68 953-1025 233-306 (334)
149 2ivn_A O-sialoglycoprotein end 62.4 14 0.00048 40.8 7.8 63 955-1022 230-298 (330)
150 2e1z_A Propionate kinase; TDCD 60.3 1.3E+02 0.0046 33.7 15.0 45 310-358 310-355 (415)
151 3qbx_A Anhydro-N-acetylmuramic 56.9 21 0.00072 39.6 7.7 71 949-1022 261-336 (371)
152 1nu0_A Hypothetical protein YQ 56.2 9 0.00031 36.2 4.0 22 2-23 2-23 (138)
153 2ap1_A Putative regulator prot 56.1 1.3E+02 0.0043 32.8 14.4 87 753-846 60-163 (327)
154 2e1z_A Propionate kinase; TDCD 56.1 63 0.0021 36.3 11.4 43 952-998 312-355 (415)
155 3ttc_A HYPF, transcriptional r 55.6 23 0.0008 42.7 8.4 64 314-382 584-651 (657)
156 3vth_A Hydrogenase maturation 55.4 21 0.00073 44.0 8.2 63 317-384 681-749 (761)
157 3ttc_A HYPF, transcriptional r 55.0 24 0.00082 42.6 8.4 66 952-1022 582-651 (657)
158 4g9i_A Hydrogenase maturation 54.0 16 0.00055 45.3 6.9 61 957-1022 693-759 (772)
159 3vth_A Hydrogenase maturation 53.9 22 0.00076 43.8 8.1 64 956-1024 680-749 (761)
160 4g9i_A Hydrogenase maturation 53.1 17 0.0006 44.9 7.0 61 317-382 693-759 (772)
161 3aap_A Ectonucleoside triphosp 52.6 18 0.00062 40.3 6.5 41 807-847 111-158 (353)
162 3en9_A Glycoprotease, O-sialog 51.9 1.9E+02 0.0066 34.0 15.9 59 954-1017 233-297 (540)
163 1iv0_A Hypothetical protein; r 51.6 8.9 0.0003 33.8 3.0 20 4-23 2-21 (98)
164 1g99_A Acetate kinase; alpha/b 51.2 94 0.0032 34.9 11.8 46 309-358 301-347 (408)
165 3cqy_A Anhydro-N-acetylmuramic 49.9 35 0.0012 37.9 8.0 70 948-1021 267-341 (370)
166 3aap_A Ectonucleoside triphosp 49.0 22 0.00077 39.5 6.5 40 167-206 111-157 (353)
167 3ven_A O-carbamoyltransferase 48.6 28 0.00096 41.2 7.5 78 303-385 280-360 (576)
168 2ch5_A NAGK protein; transfera 47.7 3.1E+02 0.01 29.9 24.9 83 752-840 44-132 (347)
169 1bdg_A Hexokinase; phosphotran 45.7 39 0.0013 39.0 8.0 128 3-200 68-222 (451)
170 3qbx_A Anhydro-N-acetylmuramic 41.6 54 0.0018 36.4 7.9 60 317-381 269-335 (371)
171 3ven_A O-carbamoyltransferase 41.0 39 0.0013 40.0 7.1 78 943-1025 280-360 (576)
172 3etw_A Adhesin A; antiparallel 39.2 79 0.0027 28.6 7.1 36 544-591 69-104 (119)
173 1vhx_A Putative holliday junct 38.8 17 0.00058 34.9 3.0 19 4-22 4-22 (150)
174 3djc_A Type III pantothenate k 38.5 19 0.00067 38.2 3.7 23 2-24 1-23 (266)
175 3r8e_A Hypothetical sugar kina 38.0 78 0.0027 34.5 8.8 48 974-1021 260-318 (321)
176 3cj1_A Ectonucleoside triphosp 36.7 51 0.0017 38.0 7.1 43 165-207 150-208 (456)
177 4htl_A Beta-glucoside kinase; 36.1 66 0.0023 34.7 7.7 49 974-1022 237-291 (297)
178 2gup_A ROK family protein; sug 35.7 82 0.0028 33.7 8.4 48 974-1021 227-286 (292)
179 2avr_X Adhesion A; antiparalle 35.7 93 0.0032 28.0 6.9 35 544-590 69-103 (119)
180 1hjr_A Holliday junction resol 35.5 37 0.0013 32.7 4.8 18 4-21 2-19 (158)
181 2qm1_A Glucokinase; alpha-beta 34.9 1E+02 0.0036 33.4 9.2 49 974-1022 262-321 (326)
182 3cqy_A Anhydro-N-acetylmuramic 34.7 89 0.003 34.6 8.2 66 310-381 269-341 (370)
183 3zx3_A Ectonucleoside triphosp 33.7 95 0.0033 35.6 8.6 94 113-207 84-199 (452)
184 4htl_A Beta-glucoside kinase; 33.4 78 0.0027 34.1 7.7 49 334-382 237-291 (297)
185 2gup_A ROK family protein; sug 33.3 99 0.0034 33.0 8.6 43 161-206 93-135 (292)
186 2iir_A Acetate kinase; transfe 32.7 2.6E+02 0.0089 31.3 11.6 45 310-358 302-347 (403)
187 2aa4_A Mannac kinase, putative 32.4 56 0.0019 35.0 6.3 47 974-1020 233-286 (289)
188 1zbs_A Hypothetical protein PG 32.1 26 0.0009 37.8 3.5 68 949-1023 211-281 (291)
189 3cet_A Conserved archaeal prot 31.1 29 0.00099 37.8 3.5 39 166-207 107-145 (334)
190 3cj1_A Ectonucleoside triphosp 29.9 67 0.0023 37.0 6.6 43 805-847 150-208 (456)
191 2aa4_A Mannac kinase, putative 29.8 68 0.0023 34.3 6.4 46 335-380 234-286 (289)
192 4fla_A Regulation of nuclear P 27.5 99 0.0034 29.5 6.1 92 1148-1239 22-140 (152)
193 1zc6_A Probable N-acetylglucos 27.1 46 0.0016 36.0 4.5 63 950-1021 228-292 (305)
194 3vov_A Glucokinase, hexokinase 27.0 1.1E+02 0.0038 32.9 7.6 48 974-1021 237-294 (302)
195 1zbs_A Hypothetical protein PG 26.3 32 0.0011 37.1 2.9 66 310-382 212-280 (291)
196 3zx3_A Ectonucleoside triphosp 26.2 85 0.0029 36.0 6.5 42 806-847 151-199 (452)
197 4ep4_A Crossover junction endo 26.1 41 0.0014 32.7 3.3 18 4-21 2-19 (166)
198 1saz_A Probable butyrate kinas 24.4 1.1E+02 0.0037 34.3 7.0 48 974-1021 295-347 (381)
199 3zyy_X Iron-sulfur cluster bin 24.4 89 0.0031 37.4 6.4 57 938-995 499-555 (631)
200 3htv_A D-allose kinase, alloki 23.8 1.6E+02 0.0054 31.8 8.0 48 974-1021 239-298 (310)
201 1saz_A Probable butyrate kinas 23.1 1.3E+02 0.0043 33.8 7.2 48 334-381 295-347 (381)
202 3epq_A Putative fructokinase; 22.9 2.1E+02 0.0073 30.6 8.8 43 802-846 97-140 (302)
203 1zc6_A Probable N-acetylglucos 22.8 58 0.002 35.2 4.2 63 310-381 228-292 (305)
204 3cet_A Conserved archaeal prot 22.7 44 0.0015 36.4 3.0 39 806-847 107-145 (334)
205 1msz_A DNA-binding protein smu 22.3 73 0.0025 27.0 3.6 29 778-806 33-61 (86)
206 3r9p_A ACKA; ssgcid, seattle s 22.2 4.7E+02 0.016 29.1 11.1 157 790-999 176-340 (391)
207 3htv_A D-allose kinase, alloki 22.2 2E+02 0.0068 31.0 8.4 48 334-381 239-298 (310)
208 2hoe_A N-acetylglucosamine kin 21.7 2E+02 0.0067 32.1 8.5 48 974-1021 314-370 (380)
209 3zyy_X Iron-sulfur cluster bin 21.5 1.4E+02 0.0046 35.8 7.1 57 298-355 499-555 (631)
210 4gic_A HDH, histidinol dehydro 20.8 1.1E+02 0.0039 34.2 5.8 49 136-185 160-209 (423)
211 1zxo_A Conserved hypothetical 20.5 28 0.00095 37.6 0.9 46 974-1021 232-277 (291)
212 3epq_A Putative fructokinase; 20.3 2.5E+02 0.0087 30.0 8.7 43 162-206 97-140 (302)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=2.2e-99 Score=932.33 Aligned_cols=601 Identities=65% Similarity=1.003 Sum_probs=581.8
Q ss_pred ccccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCCh
Q psy5911 642 IYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 721 (1242)
Q Consensus 642 ~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~ 721 (1242)
|..++|||+||++|++++++.|.++++.|..|++.+||+|+|.+++++++|..|+.+...+|.++++++|||||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 34578999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 722 IVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 801 (1242)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~ 801 (1242)
.++...+.+||.++..+++.+.+.+.++.++|+++++++|++|++.++.+++.++.++|||||+||++.||++|++|++.
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~ 160 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHH
Q psy5911 802 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 881 (1242)
Q Consensus 802 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l 881 (1242)
|||+++++++||+|||++|+......+..++|||+||||||+|++++....+.+.++++++.|+.+|||++||+.|++|+
T Consensus 161 AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l 240 (605)
T 4b9q_A 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHH
Confidence 99999999999999999999887666789999999999999999999887777899999999999999999999999999
Q ss_pred HHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 882 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 961 (1242)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i 961 (1242)
.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++++..+..++.++.++|||++|+++++|+++++..++
T Consensus 241 ~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v 320 (605)
T 4b9q_A 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999888777777889999999999999999999999999
Q ss_pred HHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceee
Q psy5911 962 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 1041 (1242)
Q Consensus 962 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~g 1041 (1242)
+++|+++++...+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++..+++.+.|++|++||
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLG 400 (605)
T ss_dssp HHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSCEE
T ss_pred HHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred EEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcC
Q psy5911 1042 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 1121 (1242)
Q Consensus 1042 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~ 1121 (1242)
+++.+|.|.++||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|.++||.|+|.++|+|+|++|.
T Consensus 401 ie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 4b9q_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECT
T ss_pred EEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHH
Q psy5911 1122 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDE 1201 (1242)
Q Consensus 1122 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~ 1201 (1242)
||+|+|++.++.||++.+++|.++.+||++|+++|++++++++++|+..+++.+++|+||+|+|++++.|+++..+++++
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~~~~~ 560 (605)
T 4b9q_A 481 DGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEEAGDKLPAD 560 (605)
T ss_dssp TSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHH
T ss_pred CcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCHH
Confidence 99999999999999999999998889999999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1202 EKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1202 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
+|+++..+++++++||++++.++|++++++|+..+.+++.+
T Consensus 561 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 601 (605)
T 4b9q_A 561 DKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEI 601 (605)
T ss_dssp HHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999863
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=2.2e-96 Score=905.75 Aligned_cols=600 Identities=65% Similarity=1.010 Sum_probs=571.1
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
..++|||+||++|+++++++|.++++.|+.|.+.+||+|+|.++++++||..|+.+...+|.++++++||+||+.++++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 34789999999999999999999999999999999999999877889999999999999999999999999999999999
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
++...+.+||.++...++.+.+.++++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||++|++|++.|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~A 161 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999999999988889999999988999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
||+++++++||+|||++|+......+..+||||+||||||+|++++....+.+.++++++.|+.++||++||+.|++|+.
T Consensus 162 Gl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 2kho_A 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp TCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHH
T ss_pred CCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHH
Confidence 99999999999999999998765457889999999999999999998433348899999999999999999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+.+|+.++.++|||++|+++++|+++++..+|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 321 (605)
T 2kho_A 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK 321 (605)
T ss_dssp HHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999889999987776544446678899999999999999999999999
Q ss_pred HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeE
Q psy5911 963 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi 1042 (1242)
++|+++++...+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++..+++.+.|++|++||+
T Consensus 322 ~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~slgi 401 (605)
T 2kho_A 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGI 401 (605)
T ss_dssp HHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCEEE
T ss_pred HHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeeccc
Confidence 99999999989999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.+|.|.++||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|+++||.|+|.++|+|+|++|.|
T Consensus 402 ~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 481 (605)
T 2kho_A 402 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDAD 481 (605)
T ss_dssp EETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTT
T ss_pred cccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhhhccCCCCHHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLKDENTKITDEE 1202 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~~~~~~~~~~~ 1202 (1242)
|+|+|++.++.||++.+++|+.+.+||++|+++|+++++++.++|+..+++.+++|+||+|+|++++.|+++..++++++
T Consensus 482 gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~~~~~~~~~~ 561 (605)
T 2kho_A 482 GILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADD 561 (605)
T ss_dssp SCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHH
T ss_pred CceeEEEEEcCCCceeecccccccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHH
Confidence 99999999999999999999988889999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1203 KESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1203 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
|+++..+++++++||++++.++|++++++|++.+.+++.|
T Consensus 562 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 601 (605)
T 2kho_A 562 KTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEI 601 (605)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999889999999999999999999864
No 3
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1e-93 Score=881.96 Aligned_cols=543 Identities=70% Similarity=1.069 Sum_probs=525.6
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+.|||||||||||+||++.+|.+++++|..|++.+||+|+|.+++.++||..|+.+...+|.++++++||+||++++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 78899999999999999999999999999999999999999998789999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
.++...+.+||.++...++.+.+.+.++.++|+++++++|++|++.++.+++.++.++|||||+||++.||++|++|++.
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~ 160 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
|||+++++++||+|||++|+......+.++||||+||||||+|++++....+.+.++++++.|+.+|||++||++|++|+
T Consensus 161 AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l 240 (605)
T 4b9q_A 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHH
Confidence 99999999999999999999887667889999999999999999999887777899999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
..+|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+..++.++.++|||++|+++++|+++++..++
T Consensus 241 ~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v 320 (605)
T 4b9q_A 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888776677889999999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeE
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 401 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sig 401 (1242)
+++|+++++...+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++..+++++.|++|+|||
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLG 400 (605)
T ss_dssp HHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSCEE
T ss_pred HHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
+++.+|.|.+|||||++||++++++|++..|||+.+.|++|||++.++.+|..||+|.|.++||+|+|.++|+|+|++|.
T Consensus 401 ie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 4b9q_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECT
T ss_pred EEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
||+|+|++.++.||++.+++|.++.+|+++++++|++++++++++|+..+++.+++|+++.++
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~ 543 (605)
T 4b9q_A 481 DGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLL 543 (605)
T ss_dssp TSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998999999999999999999999999999999999997765
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.2e-92 Score=874.13 Aligned_cols=587 Identities=25% Similarity=0.400 Sum_probs=546.6
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
.++|||+||+||++++++.|.++++.|+.|++.+||+|+|.++ .++||..|+.+...+|.++++++|||||+.++++.+
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 4789999999999999999999999999999999999999865 789999999999999999999999999999999999
Q ss_pred HhhcccCceEEEEcCCCCeEEEEc--C--eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVK--D--QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 799 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa 799 (1242)
+...+++||.++...+|.+.+.+. + +.++|+++++++|++|++.++.+++.++.++|||||+||++.||++|++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999999888888887664 4 579999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHccCCCC------CCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKK------PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDF 873 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~------~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~ 873 (1242)
+.|||+++++++||+|||++|+..+. ..+.++||||+||||||+|++++.+ +.++++++.|+.++||++|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~----g~~~V~a~~gd~~lGG~d~ 237 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKK----GQLKVLGTACDKHFGGRDF 237 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecC----CeEEEEEEcCCCCccHHHH
Confidence 99999999999999999999987542 3568899999999999999999987 7899999999999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHH
Q psy5911 874 DMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDL 953 (1242)
Q Consensus 874 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~ 953 (1242)
|+.|++|+..+|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.++|||++|++++.|+
T Consensus 238 D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g----~~~~~~itr~~fe~l~~~l 313 (675)
T 3d2f_A 238 DLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND----VDVSSQLSREELEELVKPL 313 (675)
T ss_dssp HHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS----CCEEEEEEHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC----ceEEEEEeHHHHHHHHHHH
Confidence 999999999999999999988999999999999999999999988888888876543 3588999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhccc--ccceE
Q psy5911 954 ISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV--VKDVL 1031 (1242)
Q Consensus 954 ~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~--~~~~~ 1031 (1242)
++++..+++++|+++++++.+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. .+++.
T Consensus 314 ~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~ 393 (675)
T 3d2f_A 314 LERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFK 393 (675)
T ss_dssp HTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCE
T ss_pred HHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 67899
Q ss_pred EeecccceeeEEEeCc----eEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccc-cCcceeeEEecCCCCC
Q psy5911 1032 LLDVTPLTLGIETMGG----VMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKAS-QNKSLGKFDLNDISPA 1106 (1242)
Q Consensus 1032 ~~~~~~~~~gi~~~~~----~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~-~n~~lg~~~l~~~~~~ 1106 (1242)
+.|++|+|||+++.++ .+.++||||++||++++++|++..+++ +.+. |+|++.++. +|..||+|.|.|+||.
T Consensus 394 l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~ 470 (675)
T 3d2f_A 394 FEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLP 470 (675)
T ss_dssp EEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCC
T ss_pred EEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCC
Confidence 9999999999999877 499999999999999999999887654 3333 789999887 9999999999999999
Q ss_pred CCCcC-EEEEEEEEcCCeeEEEEEE----------ecCCCceEEEEEccCC-CCCHHHHHHHHHHHHhhhHhhHhhHHHH
Q psy5911 1107 PRGVP-QIEVSFDLDANGILNVTAK----------DKKTGKEQSIIIKSSG-GLSEIEIENMIKDAELNSELDKKFEELV 1174 (1242)
Q Consensus 1107 ~~g~~-~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~i~~~~-~l~~~e~~~~~~~~~~~~~~d~~~~~~~ 1174 (1242)
|.|.+ +|+|+|++|.||+|+|++. ++.||++.+++|..+. +||++|+++|+++++++.++|+..+++.
T Consensus 471 ~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ 550 (675)
T 3d2f_A 471 EGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETE 550 (675)
T ss_dssp SSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99975 9999999999999999995 7899999999998765 8999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1175 KCKNEADSTISIVKKNLKD-ENTKITDEEKESIEKSISNLELLIKGD----DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1175 ~~~n~le~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~wl~~~----~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
+++|+||+|+|++|+.|++ +..++++++++++...|+++++||+++ +.++|++++++|++.+.||+.|
T Consensus 551 ~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r 623 (675)
T 3d2f_A 551 DRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGR 623 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999965 778999999999999999999999864 3789999999999999999864
No 5
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=9.4e-91 Score=855.63 Aligned_cols=543 Identities=70% Similarity=1.076 Sum_probs=514.5
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+.+||||||||||+||++.+|.+++++|+.|.+.+||+|+|..+++++||+.|+.+...+|.++++++||+||+++.++
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~ 80 (605)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp ---CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSST
T ss_pred CCCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcH
Confidence 67899999999999999999999999999999999999999987788999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
.++...+.+||.++...++.+.+.++++.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|++.
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~ 160 (605)
T 2kho_A 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp THHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999998888899999998899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
|||+++++++||+|||++|+.+....+..+||||+||||||+|++++....+.+.++++++.|+.+|||++||+.|++|+
T Consensus 161 AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l 240 (605)
T 2kho_A 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999876546788999999999999999999843334889999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+..|+.++.++|||++|+++++|+++++..+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i 320 (605)
T 2kho_A 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998999998776654444677889999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeE
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 401 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sig 401 (1242)
+++|+++++...+|+.|+||||+|++|+|+++|++.||.++..+.||++|||+|||++|+.+++..+++++.|++|++||
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~slg 400 (605)
T 2kho_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLG 400 (605)
T ss_dssp HHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCEE
T ss_pred HHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeecc
Confidence 99999999998999999999999999999999999999999999999999999999999999987788999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
+++.+|.|.+|||||++||++++++|++..|+|+.+.|++|||++.++.+|..||+|.|.++||.|+|.++|+|+|++|.
T Consensus 401 i~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 2kho_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECT
T ss_pred ccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
||+|+|++.++.||++.+++|+.+.+|+++++++|++++++++++|+..+++.+++|++++++
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~ 543 (605)
T 2kho_A 481 DGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLL 543 (605)
T ss_dssp TSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEEcCCCceeecccccccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988899999999999999999999999999999999997775
No 6
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=4.7e-86 Score=817.49 Aligned_cols=531 Identities=26% Similarity=0.422 Sum_probs=493.1
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|..+||||||||||+||++.+|.++++.|+.|++.+||+|+|.++ .++||..|+.+...+|.++++++||+||++++++
T Consensus 1 Mm~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 79 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHP 79 (675)
T ss_dssp -CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCT
T ss_pred CCcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcH
Confidence 556999999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEc--C--eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVK--D--KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
.++...+++||.++...++.+.+.+. + +.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++
T Consensus 80 ~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~ 159 (675)
T 3d2f_A 80 DFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIAD 159 (675)
T ss_dssp THHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHH
Confidence 99999999999999888888877664 3 6799999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCC------CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKK------PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGE 231 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~------~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 231 (1242)
|++.|||+++++++||+|||++|+..+. ..+.++||||+||||||+|++++.+ +.++++++.|+.+|||+
T Consensus 160 Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~----g~~~V~a~~gd~~lGG~ 235 (675)
T 3d2f_A 160 AARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKK----GQLKVLGTACDKHFGGR 235 (675)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHH
T ss_pred HHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecC----CeEEEEEEcCCCCccHH
Confidence 9999999999999999999999987542 3578899999999999999999987 78999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHH
Q psy5911 232 DFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVE 311 (1242)
Q Consensus 232 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~ 311 (1242)
+||++|++|+..+|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|++++.
T Consensus 236 d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g----~~~~~~itr~~fe~l~~ 311 (675)
T 3d2f_A 236 DFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND----VDVSSQLSREELEELVK 311 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS----CCEEEEEEHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC----ceEEEEEeHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999988888888876543 46889999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCC--ccc
Q psy5911 312 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGV--VKD 389 (1242)
Q Consensus 312 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~--~~~ 389 (1242)
|+++++..+++++|+.++++..+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++. .++
T Consensus 312 ~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~ 391 (675)
T 3d2f_A 312 PLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRP 391 (675)
T ss_dssp HHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999984 678
Q ss_pred eEEEeeccceeEEEeeCC----eeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCccccc-CCcceeEEEecCCC
Q psy5911 390 VLLLDVTPLTLGIETMGG----VMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKAS-QNKSLGKFDLNDIS 464 (1242)
Q Consensus 390 ~~~~d~~~~sigi~~~~~----~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~-~~~~lg~~~i~~~~ 464 (1242)
+.+.|++|+|||+++.++ .+.+|||||++||++++++|++..++| +.+. |+|++.++. +|..||+|.|+++|
T Consensus 392 ~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~ 468 (675)
T 3d2f_A 392 FKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQ 468 (675)
T ss_dssp CEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCC
T ss_pred eEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcC
Confidence 999999999999999877 499999999999999999999876654 3333 779999887 99999999999999
Q ss_pred CCCCCcC-EEEEEEEecCCeeEEEEEE----------EcCCCcEEEEEEecCC-CCchHHHHHHHHHHHhhchhhhhHHH
Q psy5911 465 PAPRGVP-QIEVSFDLDANGILNVTAK----------DKKTGKEQSIIIKSSG-GLSEIEIENMIKDAELNSELDKKFEE 532 (1242)
Q Consensus 465 ~~~~g~~-~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~i~~~~-~l~~eei~~~~~~~~~~~~~d~~~~e 532 (1242)
|.|+|.+ +|+|+|++|.||+|+|++. ++.+|++.+++|..+. +|+++++++|++++++++++|+..++
T Consensus 469 ~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~ 548 (675)
T 3d2f_A 469 LPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAE 548 (675)
T ss_dssp CCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999985 9999999999999999995 7899999999998764 89999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy5911 533 LVKCKNEQIIIL 544 (1242)
Q Consensus 533 ~~e~~~~~~~~~ 544 (1242)
+.+++|++++++
T Consensus 549 ~~~~~n~le~~i 560 (675)
T 3d2f_A 549 TEDRKNTLEEYI 560 (675)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999997765
No 7
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.8e-86 Score=808.48 Aligned_cols=530 Identities=54% Similarity=0.837 Sum_probs=497.4
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++ .++||+.|+.+...+|.++++++||+||++++++
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 81 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDA 81 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCS
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcH
Confidence 567999999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEc--C--eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVK--D--KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~ 157 (1242)
.++...+.+||.++. .++.+.+.+. + +.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 82 ~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~ 160 (554)
T 1yuw_A 82 VVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKD 160 (554)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 999999999999884 3666666553 3 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechHHHHHHHhccCCC-CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 158 AGKIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
|++.||++++++++||+|||++|+.... ..+..+||||+||||||+|++++.+ +.++++++.|+.++||++||++
T Consensus 161 A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~----g~~~v~a~~g~~~lGG~d~d~~ 236 (554)
T 1yuw_A 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAA----GIFEVKSTAGDTHLGGEDFDNR 236 (554)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcC----CcEEEEEEeCCCCCCHHHHHHH
Confidence 9999999999999999999999998765 2578899999999999999999986 7899999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHH
Q psy5911 237 IINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISK 316 (1242)
Q Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~ 316 (1242)
|++|+..+|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++...|||++|+++++|++++
T Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~~~ 312 (554)
T 1yuw_A 237 MVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRG 312 (554)
T ss_dssp HHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHHHH
Confidence 999999999999999998999999999999999999999999888888866543 4678999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc-cccccCCCcchhhHhHHHHhhhhhcCC----ccceE
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSGV----VKDVL 391 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~~~~~~~p~~ava~GAa~~a~~l~~~----~~~~~ 391 (1242)
+..+++++|+++++...+|+.|+||||+|++|+|+++|++.|+ .++..+.||++|||+|||++|+.+++. .+++.
T Consensus 313 i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~ 392 (554)
T 1yuw_A 313 TLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392 (554)
T ss_dssp TTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSC
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceE
Confidence 9999999999999999999999999999999999999999995 788899999999999999999999874 57889
Q ss_pred EEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcC
Q psy5911 392 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 471 (1242)
Q Consensus 392 ~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 471 (1242)
+.|++|++||+++.+|.|.++||||++||++++++|++..|+|+.+.|++|||++..+.+|..||+|.|.++||.|+|.+
T Consensus 393 ~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~ 472 (554)
T 1yuw_A 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVP 472 (554)
T ss_dssp CCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCC
T ss_pred EEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecC-CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHH
Q psy5911 472 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQI 541 (1242)
Q Consensus 472 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~ 541 (1242)
+|+|+|++|.||+|+|++.++.+|++.+++|.++ .+|++++++++++++++++++|+..+++.+++|+++
T Consensus 473 ~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e 543 (554)
T 1yuw_A 473 QIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 543 (554)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECS
T ss_pred EEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999877 569999999999999999999988888888877763
No 8
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.2e-86 Score=811.61 Aligned_cols=542 Identities=53% Similarity=0.812 Sum_probs=509.6
Q ss_pred ccccccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCC
Q psy5911 640 IGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYT 719 (1242)
Q Consensus 640 ~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~ 719 (1242)
|+|..++|||+||+||+++++++|.++++.|+.|++.+||+|+|.++ .++||..|+.+...+|.++++++|||||+.++
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~ 79 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFD 79 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSS
T ss_pred CCCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCC
Confidence 34556899999999999999999999999999999999999999865 78999999999999999999999999999999
Q ss_pred ChhHHhhcccCceEEEEcCCCCeEEEEc--C--eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHH
Q psy5911 720 DEIVQKDIKMVPYKIVAADNGDAWVEVK--D--QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQAT 795 (1242)
Q Consensus 720 d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~ 795 (1242)
|+.++...+.+||.++. .++.+.+.+. + +.++|+++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 80 d~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~ 158 (554)
T 1yuw_A 80 DAVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAT 158 (554)
T ss_dssp CSHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHH
T ss_pred cHHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 99999999999999884 3677766653 3 68999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeeeechhHHHHHHccCCCC-CCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHH
Q psy5911 796 KDAGKIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFD 874 (1242)
Q Consensus 796 ~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D 874 (1242)
++|++.||++++++++||+|||++|+.... ..+..++|||+||||||+|++++.+ +.++++++.|+.++||++||
T Consensus 159 ~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~----g~~~v~a~~g~~~lGG~d~d 234 (554)
T 1yuw_A 159 KDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAA----GIFEVKSTAGDTHLGGEDFD 234 (554)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHH
T ss_pred HHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcC----CcEEEEEEeCCCCCCHHHHH
Confidence 999999999999999999999999998764 2468899999999999999999986 78999999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHH
Q psy5911 875 MRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLI 954 (1242)
Q Consensus 875 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~ 954 (1242)
+.|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++...|+|++|+++++|++
T Consensus 235 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~ 310 (554)
T 1yuw_A 235 NRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLF 310 (554)
T ss_dssp HHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHH
Confidence 99999999999999999998899999999999999999999998888888865543 45789999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc-ccccccCCcchhhhhhHHHhhhhhccc----ccc
Q psy5911 955 SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKKDINPDEAVAVGASVQAGVLSGV----VKD 1029 (1242)
Q Consensus 955 ~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~v~~~~~p~~aVa~GAa~~a~~l~~~----~~~ 1029 (1242)
+++..+++++|+++++.+.+|+.|+||||+|++|+|++.|++.|+ .++..+.||++|||+|||++|+.+++. .++
T Consensus 311 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~ 390 (554)
T 1yuw_A 311 RGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQD 390 (554)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTS
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccc
Confidence 999999999999999999999999999999999999999999995 788899999999999999999999874 578
Q ss_pred eEEeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCC
Q psy5911 1030 VLLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRG 1109 (1242)
Q Consensus 1030 ~~~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g 1109 (1242)
+.+.|++|++||+++.+|.|.++||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|+++||.|+|
T Consensus 391 ~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g 470 (554)
T 1yuw_A 391 LLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470 (554)
T ss_dssp SCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTT
T ss_pred eEEEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEEEEcCCeeEEEEEEecCCCceEEEEEccCC-CCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHH
Q psy5911 1110 VPQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSG-GLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVK 1188 (1242)
Q Consensus 1110 ~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~-~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~ 1188 (1242)
.++|+|+|++|.||+|+|++.++.||++.+++|..+. +||++|+++|++++++++++|+..+++.+++|+||+|+|.++
T Consensus 471 ~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~ 550 (554)
T 1yuw_A 471 VPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMK 550 (554)
T ss_dssp CCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSC
T ss_pred ccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998874 599999999999999999999999999999999999999988
Q ss_pred Hhh
Q psy5911 1189 KNL 1191 (1242)
Q Consensus 1189 ~~l 1191 (1242)
++|
T Consensus 551 ~~l 553 (554)
T 1yuw_A 551 ATV 553 (554)
T ss_dssp CCC
T ss_pred Hhh
Confidence 765
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=7.7e-83 Score=773.08 Aligned_cols=508 Identities=62% Similarity=0.931 Sum_probs=475.6
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+.+||||||||||+||++.+|.+++++|+.|.+.+||+|+|. ++.++||++|+.+...+| ++++++||+||+++.
T Consensus 1 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~-- 76 (509)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-NGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK-- 76 (509)
T ss_dssp CCCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-SSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC--
T ss_pred CCCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-CCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE--
Confidence 6789999999999999999999999999999999999999994 568999999999999999 999999999998432
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
+.+++..++|+++++++|++|+..++.+++.++.++|||||++|++.||++|++|++.
T Consensus 77 ----------------------~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~ 134 (509)
T 2v7y_A 77 ----------------------VEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRI 134 (509)
T ss_dssp ----------------------EEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ----------------------EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 2335667899999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
||++++++++||+|||++|+.... .+.++||||+||||||+|++++.+ +.++++++.|+.++||.+||+.|++|+
T Consensus 135 AGl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~----g~~~v~a~~g~~~lGG~d~d~~l~~~l 209 (509)
T 2v7y_A 135 AGLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGD----GVFEVKATAGDNHLGGDDFDQVIIDYL 209 (509)
T ss_dssp TTCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcC----CeEEEEEecCCCCcCHHHHHHHHHHHH
Confidence 999999999999999999998764 678999999999999999999876 789999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+.+|+.++.++|||++|+++++|+++++..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i 289 (509)
T 2v7y_A 210 VNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPV 289 (509)
T ss_dssp HHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888899999999999999999999988889988776544344567889999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCccceEEEeeccceeE
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLG 401 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~d~~~~sig 401 (1242)
+++|+++++...+|+.|+||||+|++|+|+++|++.|+.++..+.||++|||+|||++|+.+++..+++.+.|++|++||
T Consensus 290 ~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~slg 369 (509)
T 2v7y_A 290 RQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLG 369 (509)
T ss_dssp HHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEEE
T ss_pred HHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeeccccc
Confidence 99999999998999999999999999999999999999999999999999999999999999987788999999999999
Q ss_pred EEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCEEEEEEEecC
Q psy5911 402 IETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDA 481 (1242)
Q Consensus 402 i~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~ 481 (1242)
+++.++.|.++||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|+++||.|+|.++|+|+|++|.
T Consensus 370 i~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 449 (509)
T 2v7y_A 370 IETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDA 449 (509)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECT
T ss_pred eeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHH
Q psy5911 482 NGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQ 540 (1242)
Q Consensus 482 ~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~ 540 (1242)
||+|+|++.++.||++.+++|..+.+|++++++++++++++++++|+..+++.+++|++
T Consensus 450 ~gil~v~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~ 508 (509)
T 2v7y_A 450 NGIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEA 508 (509)
T ss_dssp TSCEEEEEEETTTCCEEEEEECSSCSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC----
T ss_pred CceEEEEEEEcCCCcEEEEEEEecCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhc
Confidence 99999999999999999999998889999999999999999999999998888888876
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=9.6e-81 Score=754.68 Aligned_cols=508 Identities=61% Similarity=0.914 Sum_probs=475.0
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
..++|||+||++++++++.+|.+++++|+.|++.+||+|+| .+++++||..|+.+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~--- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK--- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC---
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE---
Confidence 35789999999999999999999999999999999999999 4568999999999999999 999999999998432
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
+.+++..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++|++.|
T Consensus 77 ---------------------~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~A 135 (509)
T 2v7y_A 77 ---------------------VEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIA 135 (509)
T ss_dssp ---------------------EEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred ---------------------EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 23456678999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
|++++++++||+|||++|+.... .+..+||||+||||||+|++++.+ +.++++++.++.++||++||+.|++|+.
T Consensus 136 Gl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~----g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 210 (509)
T 2v7y_A 136 GLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGD----GVFEVKATAGDNHLGGDDFDQVIIDYLV 210 (509)
T ss_dssp TCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred CCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcC----CeEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999998764 678899999999999999999976 7899999999999999999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
++|+.+++.++..+++++.+|+.+||++|+.||....+.+.+|.+..+.+|..++.++|||++|+++++|+++++.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 290 (509)
T 2v7y_A 211 NQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVR 290 (509)
T ss_dssp HHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888999999999999999999999888999887765444445678899999999999999999999999
Q ss_pred HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcccccceEEeecccceeeE
Q psy5911 963 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVVKDVLLLDVTPLTLGI 1042 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~~~~gi 1042 (1242)
++|+++++...+++.|+||||+|++|+|+++|++.|+.++..+.||++|||+|||++|+.+++..+++.+.|++|++||+
T Consensus 291 ~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~slgi 370 (509)
T 2v7y_A 291 QALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGI 370 (509)
T ss_dssp HHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEEEE
T ss_pred HHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeeccccce
Confidence 99999999888999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred EEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCEEEEEEEEcCC
Q psy5911 1043 ETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQIEVSFDLDAN 1122 (1242)
Q Consensus 1043 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~ 1122 (1242)
++.++.|.++||||++||+++++.|++..|+|+.+.|++|||++..+.+|..||+|.|+++||.|+|.++|+|+|++|.|
T Consensus 371 ~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 450 (509)
T 2v7y_A 371 ETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDAN 450 (509)
T ss_dssp EETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTT
T ss_pred eecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHH
Q psy5911 1123 GILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEAD 1181 (1242)
Q Consensus 1123 g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le 1181 (1242)
|+|+|++.++.||++.+++|..+.+||++|+++|++++++++++|+..+++.+++|+||
T Consensus 451 gil~v~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 451 GIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp SCEEEEEEETTTCCEEEEEECSSCSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred ceEEEEEEEcCCCcEEEEEEEecCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 99999999999999999999998889999999999999999999999999999999986
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=4.9e-59 Score=548.92 Aligned_cols=383 Identities=70% Similarity=1.081 Sum_probs=351.2
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
|+.+||||||||||++|++.+|.++++.|+.|.+.+||+|+|.++++++||+.|+.+...+|.++++++||+||+.+.++
T Consensus 1 m~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 80 (383)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (383)
T ss_dssp --CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSH
T ss_pred CCcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcH
Confidence 67899999999999999999999999999999999999999987778999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHH
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKI 161 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~ 161 (1242)
.++...+.+||.++...++...+.++++.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 81 ~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 160 (383)
T 1dkg_D 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (383)
T ss_dssp HHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 89988889999998888888888888889999999999999999999999998899999999999999999999999999
Q ss_pred cCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHH
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHL 241 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l 241 (1242)
||++++.+++||+|||++|+......+..+||||+||||+|+++++.....+.+.++++++.++..+||++||+.|++++
T Consensus 161 aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l 240 (383)
T 1dkg_D 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (383)
T ss_dssp TTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHH
T ss_pred cCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999998765446778999999999999999998743333678899999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHH
Q psy5911 242 IYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPC 321 (1242)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i 321 (1242)
.++|..+++.++..+++.+.+|+..||++|+.||......+.++.+....+|+.++.+.|||++|+++++|+++++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i 320 (383)
T 1dkg_D 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELL 320 (383)
T ss_dssp HHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999988988888999999999999999999999888888887665433333567789999999999999999999999
Q ss_pred HHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhc
Q psy5911 322 EVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 322 ~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~ 384 (1242)
+++|+.+++...+++.|+|+||+|++|+|+++|++.|+.++..+.||+++||+|||++|+.++
T Consensus 321 ~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999888999999999999999999999999999999999999999999999998764
No 12
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1e-58 Score=550.23 Aligned_cols=375 Identities=53% Similarity=0.828 Sum_probs=349.1
Q ss_pred CCCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCC
Q psy5911 1 QYCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 80 (1242)
Q Consensus 1 q~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 80 (1242)
|...+||||||||||+||++.+|.+++++++.|++++||+|+|.++ .++||..|+.+...+|.++++++||+||+++++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~ 99 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 99 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCTTS
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCCCc
Confidence 4567999999999999999999999999999999999999999865 789999999999999999999999999999999
Q ss_pred hHHHHHhccCCeEEEecCCCCeEEEE--cC--eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHH
Q psy5911 81 EIVQTVLKMVPYKIVAADNGDAWVEV--KD--KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATK 156 (1242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~ 156 (1242)
+.++...+.+||.++. .++...+.+ .+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|+
T Consensus 100 ~~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 178 (404)
T 3i33_A 100 ATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATK 178 (404)
T ss_dssp HHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHH
Confidence 9999999999999886 556666555 34 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeeeeechHHHHHHHhccCCCC---CCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHH
Q psy5911 157 DAGKIAGLEVLRIINEPTAAALAYGLDKKP---DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDF 233 (1242)
Q Consensus 157 ~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~---~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~i 233 (1242)
+|++.||++++++++||+|||++|+..... .+..++|||+||||+|++++++.+ +.++++++.++..+||.+|
T Consensus 179 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~~ 254 (404)
T 3i33_A 179 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIED----GIFEVKSTAGDTHLGGEDF 254 (404)
T ss_dssp HHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHH
T ss_pred HHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeC----CeEEEEEEeCCCCCCHHHH
Confidence 999999999999999999999999877652 578899999999999999999987 7899999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHH
Q psy5911 234 DMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDL 313 (1242)
Q Consensus 234 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~ 313 (1242)
|+.|++++.++|+.+++.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.|+|++|+++++|+
T Consensus 255 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g----~~~~~~i~r~~~~~~~~~~ 330 (404)
T 3i33_A 255 DNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----VDFYTSITRARFEELNADL 330 (404)
T ss_dssp HHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC----ceeEEEEcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888888766544 5788999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc-ccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 314 ISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 314 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
++++.++++++|+.+++...+|+.|+||||+|++|+|+++|++.| +.++..+.||+++||+|||++|+.+++
T Consensus 331 ~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 331 FRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999 788999999999999999999999875
No 13
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.9e-57 Score=538.39 Aligned_cols=372 Identities=53% Similarity=0.841 Sum_probs=349.5
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChH
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 82 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 82 (1242)
..+||||||||||++|++.+|.++++.++.|.+.+||+|+|.++ .+++|+.|..+...+|.++++++||++|++++++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 96 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRS 96 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHH
Confidence 56899999999999999999999999999999999999999875 78999999999999999999999999999999999
Q ss_pred HHHHhccCCeEEEecCCCCeEEEEc--C--eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHH
Q psy5911 83 VQTVLKMVPYKIVAADNGDAWVEVK--D--KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDA 158 (1242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~A 158 (1242)
++...+.+||.++ ..++...+.+. + ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 97 VQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 9999999999988 55666666653 3 67999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHH
Q psy5911 159 GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRII 238 (1242)
Q Consensus 159 a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~ 238 (1242)
++.||++++++++||+|||++|+......+..++|||+||||+|++++++.. +.++++++.++..+||.+||+.|+
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~----~~~~~~~~~~~~~lGG~~~d~~l~ 251 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIEN----GVFEVQATSGDTHLGGEDFDYKIV 251 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeC----CEEEEEEEcCCCCCChHHHHHHHH
Confidence 9999999999999999999999887776788999999999999999999987 899999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHH
Q psy5911 239 NHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSL 318 (1242)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~ 318 (1242)
+++.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.++|++|+++++++++++.
T Consensus 252 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~----~~~~~~i~r~~~~~~~~~~~~~i~ 327 (394)
T 3qfu_A 252 RQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG----IDLSETLTRAKFEELNLDLFKKTL 327 (394)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT----EEEEEEEEHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC----ceeEEEEEHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888766543 568899999999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc-ccccccCCCcchhhHhHHHHhhhhhc
Q psy5911 319 KPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~~~~~~~p~~ava~GAa~~a~~l~ 384 (1242)
.++.++|+.+++...+++.|+|+||+|++|+|+++|++.| +.++..+.||+++||+|||++|+.++
T Consensus 328 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 328 KPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999999999889999999999999999999999999 78999999999999999999998764
No 14
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=7.3e-57 Score=534.56 Aligned_cols=370 Identities=28% Similarity=0.445 Sum_probs=334.6
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChH
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 82 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 82 (1242)
..+||||||||||+||++.+|.++++.++.|.+.+||+|+|.+ +.++||..|..+...+|.++++++|+++|++++++.
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 3699999999999999999999999999999999999999985 588999999999999999999999999999987765
Q ss_pred HHHHhccCCeEEEecCCCCeEEEEcC--------eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHH
Q psy5911 83 VQTVLKMVPYKIVAADNGDAWVEVKD--------KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQA 154 (1242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~ 154 (1242)
++.. .+++.+. ..++.+.+.+.. +.++|+++++++|++|++.++.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~--~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHN--HASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGG--TTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhh--cccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 5443 2333332 346677777643 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeeeeechHHHHHHHhccCC--CCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHH
Q psy5911 155 TKDAGKIAGLEVLRIINEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGED 232 (1242)
Q Consensus 155 ~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~ 232 (1242)
|++|++.|||+++++++||+|||++|+... ...+..++|||+||||+|+|++++.+ +.++++++.++..+||.+
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~ 244 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRS----GMYTILATVHDYEYHGIA 244 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEESSSSHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeC----CeEEEEEecCCCCcCHHH
Confidence 999999999999999999999999998864 24678899999999999999999987 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHH
Q psy5911 233 FDMRIINHLIYEFKIENG--VDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLV 310 (1242)
Q Consensus 233 iD~~l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~ 310 (1242)
||+.|++++..+|..+++ .+...+++.+.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|++++
T Consensus 245 ~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~ 320 (409)
T 4gni_A 245 LDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG----LDFASTINRLRYETIA 320 (409)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT----EEEEEEEEHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC----cceEEEeeHHHHHHHH
Confidence 999999999999999888 7788899999999999999999999999998988876644 6788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccc--c------ccCCCcchhhHhHHHHhhhh
Q psy5911 311 EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE--V------KKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~--~------~~~~~p~~ava~GAa~~a~~ 382 (1242)
+|+++++..+|+++|+++++...+|+.|+||||+|++|+|+++|++.|+.+ + ....||++|||+|||++|+.
T Consensus 321 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~ 400 (409)
T 4gni_A 321 RTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASL 400 (409)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhh
Confidence 999999999999999999999899999999999999999999999999865 3 57899999999999999987
Q ss_pred hc
Q psy5911 383 LS 384 (1242)
Q Consensus 383 l~ 384 (1242)
..
T Consensus 401 ~~ 402 (409)
T 4gni_A 401 IQ 402 (409)
T ss_dssp HH
T ss_pred hh
Confidence 55
No 15
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=5.3e-56 Score=523.05 Aligned_cols=382 Identities=69% Similarity=1.062 Sum_probs=350.5
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
..++|||+||++++++++++|.++++.|+.|.+.+||+|+|.++++++||..|+.+...+|.++++++||+||+.+.++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 35789999999999999999999999999999999999999877789999999999999999999999999999999998
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIA 802 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~A 802 (1242)
++...+.+||.++...++...+.+++..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++.|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~a 161 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99889999999988889998888888899999999999999999999999988999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHH
Q psy5911 803 GLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLI 882 (1242)
Q Consensus 803 Gl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 882 (1242)
|++++.+++||+|||++|+......+..++|||+||||||+++++.....+.+.++++++.++..+||++||+.|.+++.
T Consensus 162 Gl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~ 241 (383)
T 1dkg_D 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (383)
T ss_dssp TCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHH
T ss_pred CCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999988754456789999999999999999987433236788999889899999999999999999
Q ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q psy5911 883 YEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCE 962 (1242)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~ 962 (1242)
++|+.+++.++..+++.+.+|+.+||++|+.|+......+.++.+....+|..++.++|+|++|+++++|+++++.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~ 321 (383)
T 1dkg_D 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLK 321 (383)
T ss_dssp HHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888999999999999999999998888888876654433335567899999999999999999999999
Q ss_pred HHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhc
Q psy5911 963 VALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 963 ~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
++|+++++...+++.|+|+||+|++|+|+++|++.|+.++..+.||++|||+|||++|+.++
T Consensus 322 ~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999998888999999999999999999999999999999999999999999999998764
No 16
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.6e-55 Score=522.77 Aligned_cols=371 Identities=52% Similarity=0.821 Sum_probs=347.0
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|||+||++++++++.+|.++++.++.|++.+||+|+|.++ .+++|..|..+...+|.++++++||++|+.++++.++
T Consensus 25 viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~~ 103 (404)
T 3i33_A 25 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQ 103 (404)
T ss_dssp CEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHHH
T ss_pred EEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHHH
Confidence 789999999999999999999999999999999999999876 7899999999999999999999999999999999999
Q ss_pred hhcccCceEEEEcCCCCeEEEE--cC--eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 725 KDIKMVPYKIVAADNGDAWVEV--KD--QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
...+.|||.+.. .++...+.+ .+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++|++
T Consensus 104 ~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~ 182 (404)
T 3i33_A 104 SDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGT 182 (404)
T ss_dssp HHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 999999999886 566666555 34 6899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCCC---CCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKP---DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 877 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~---~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l 877 (1242)
.||++++++++||+|||++|+..... .+..++|||+||||||++++++.+ +.++++++.++..+||.+||+.|
T Consensus 183 ~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 183 ITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIED----GIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp HHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHH
T ss_pred HcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeC----CeEEEEEEeCCCCCCHHHHHHHH
Confidence 99999999999999999999887652 578899999999999999999987 78999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHH
Q psy5911 878 INHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKS 957 (1242)
Q Consensus 878 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~ 957 (1242)
.+++.++|+.+++.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.++|++|+++++|+++++
T Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g----~~~~~~i~r~~~~~~~~~~~~~i 334 (404)
T 3i33_A 259 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----VDFYTSITRARFEELNADLFRGT 334 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC----ceeEEEEcHHHHHHHHHHHHHHH
Confidence 99999999999999998999999999999999999999999888888765543 56889999999999999999999
Q ss_pred HHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-cccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 958 LKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 958 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
.+++.++|+++++...+++.|+||||+|++|+|+++|++.| +.++..+.||++|||+|||++|+.+++
T Consensus 335 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 335 LEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999899999999999999999999999999 788999999999999999999999875
No 17
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2.3e-54 Score=511.95 Aligned_cols=371 Identities=53% Similarity=0.832 Sum_probs=348.3
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
.++|||+||++++++++.+|.++++.++.|++.+||+|+|.++ .+++|..|..+...+|.++++++||++|++++++.+
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 4689999999999999999999999999999999999999876 789999999999999999999999999999999999
Q ss_pred HhhcccCceEEEEcCCCCeEEEEc--C--eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHH
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVK--D--QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAG 799 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa 799 (1242)
+...+.+||.+. ..++...+.+. + ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999988 56677766653 3 689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+.||++++++++||+|||++|+......+..++|||+||||||++++++.. +.++++++.++..+||.+||+.|.+
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~----~~~~~~~~~~~~~lGG~~~d~~l~~ 252 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIEN----GVFEVQATSGDTHLGGEDFDYKIVR 252 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeC----CEEEEEEEcCCCCCChHHHHHHHHH
Confidence 999999999999999999999888776788999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHH
Q psy5911 880 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLK 959 (1242)
Q Consensus 880 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~ 959 (1242)
++.++|+.+++.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.++|++|+++++|+++++.+
T Consensus 253 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~----~~~~~~i~r~~~~~~~~~~~~~i~~ 328 (394)
T 3qfu_A 253 QLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG----IDLSETLTRAKFEELNLDLFKKTLK 328 (394)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT----EEEEEEEEHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC----ceeEEEEEHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888888765543 4688999999999999999999999
Q ss_pred HHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-cccccccCCcchhhhhhHHHhhhhhc
Q psy5911 960 PCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 960 ~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
++.++|+++++...+++.|+|+||+|++|+|+++|++.| +.++..+.||++|||.|||++|+.++
T Consensus 329 ~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 329 PVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999889999999999999999999999999 78899999999999999999999764
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=7.5e-54 Score=508.69 Aligned_cols=370 Identities=27% Similarity=0.428 Sum_probs=334.0
Q ss_pred ccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhH
Q psy5911 644 PTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIV 723 (1242)
Q Consensus 644 ~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~ 723 (1242)
.++|+|+||++++++++..|.++++.|+.|.+.+||+|+|.+ +.+++|..|..+...+|.++++++||++|+.++++.+
T Consensus 14 ~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 14 VVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred cEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 478999999999999999999999999999999999999985 4789999999999999999999999999999887765
Q ss_pred HhhcccCceEEEEcCCCCeEEEEcC--------eeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHH
Q psy5911 724 QKDIKMVPYKIVAADNGDAWVEVKD--------QYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQAT 795 (1242)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~ 795 (1242)
+.... ++.. ...++.+.+.+.. ..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 93 ~~~~~--~~~~-~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNHA--SAHP-QEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGTT--SCCC-EEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhcc--ccce-ecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 54433 3332 2356677777643 48999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeeeechhHHHHHHccCCC--CCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHH
Q psy5911 796 KDAGKIAGLEVLRIINEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDF 873 (1242)
Q Consensus 796 ~~Aa~~AGl~~~~li~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~ 873 (1242)
++|++.|||+++++++||+|||++|+... ...+..++|||+||||||+|++++.+ +.++++++.++..+||.+|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~~ 245 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRS----GMYTILATVHDYEYHGIAL 245 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEET----TEEEEEEEEEESSSSHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeC----CeEEEEEecCCCCcCHHHH
Confidence 99999999999999999999999998874 24678899999999999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcC--CCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHH
Q psy5911 874 DMRIINHLIYEFKIENG--VDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVE 951 (1242)
Q Consensus 874 D~~l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~ 951 (1242)
|+.|++++..+|..+++ .+...+++.+.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|+++++
T Consensus 246 d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~~ 321 (409)
T 4gni_A 246 DKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG----LDFASTINRLRYETIAR 321 (409)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC----cceEEEeeHHHHHHHHH
Confidence 99999999999999888 7788899999999999999999999999998888876543 56889999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhccc--c------cccCCcchhhhhhHHHhhhhh
Q psy5911 952 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKE--V------KKDINPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 952 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~--v------~~~~~p~~aVa~GAa~~a~~l 1023 (1242)
|+++++.++|+++|+++++...+|+.|+||||+|++|+|++.|++.|+.+ + ....||++|||+|||++|+..
T Consensus 322 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 322 TVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 99999999999999999999889999999999999999999999999865 3 578999999999999999876
Q ss_pred cc
Q psy5911 1024 SG 1025 (1242)
Q Consensus 1024 ~~ 1025 (1242)
..
T Consensus 402 ~~ 403 (409)
T 4gni_A 402 QE 403 (409)
T ss_dssp HC
T ss_pred hh
Confidence 53
No 19
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.7e-39 Score=376.08 Aligned_cols=314 Identities=25% Similarity=0.356 Sum_probs=239.8
Q ss_pred CCCeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC-Cc-EEEcHHHHHhhhhCCCchhhhchhhhCCCC
Q psy5911 1 QYCKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-NR-IIVGLPAKRQAITNPNNTLYAIKRLIGRKY 78 (1242)
Q Consensus 1 q~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~-~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~ 78 (1242)
+|+.+||||||||||++++..++ .++ .+||+|+|..+ ++ +++|++|+....++|.++...
T Consensus 1 ~~~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~--------- 62 (344)
T 1jce_A 1 MLRKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI--------- 62 (344)
T ss_dssp ---CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE---------
T ss_pred CCCceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE---------
Confidence 57889999999999999875443 222 27999999876 44 579999998777777664321
Q ss_pred CChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHh--HhcCCCCcEEEEecCCCCHHHHHHHH
Q psy5911 79 TDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAET--FLNEKIEKAVITVPAYFNDSQRQATK 156 (1242)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~--~~~~~~~~~vitVPa~f~~~qr~~~~ 156 (1242)
+|+. ...+...+....+++++.+.+.. .++ ..++|||||++|++.||++++
T Consensus 63 -----------~p~~--------------~g~i~~~~~~~~i~~~~l~~~~~~~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 63 -----------RPMR--------------DGVIADYTVALVMLRYFINKAKGGMNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -----------CCEE--------------TTEESSHHHHHHHHHHHHHHHHTSCCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -----------ecCC--------------CCeeCChHHHHHHHHHHHHHHhhccccC--CCeEEEEECCCCCHHHHHHHH
Confidence 1221 11122333444444444444433 233 478999999999999999999
Q ss_pred HHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 157 DAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 157 ~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
+|++.||++++.+++||+|||++|+.... .+..++|||+||||||+++++... ++ ..++..+||.+||+.
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~--------~~-~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGS--------IV-TWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTE--------EE-EEEEESCSHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCC--------EE-eeCCCCccChhHHHH
Confidence 99999999999999999999999987654 567789999999999999998643 11 245678999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce------eeeeccccccCCCCCeeeEEEEcHHHHHHHH
Q psy5911 237 IINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ------TDINLPYITADKNGPKHLNVKITRSKLESLV 310 (1242)
Q Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~ 310 (1242)
|.+++.+++.. ++. ...||++|+.|+.... ..+.++... ..++.+..++|+|++|++++
T Consensus 186 l~~~l~~~~~~----~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~i~~~~~~~~~ 250 (344)
T 1jce_A 186 IVQYVRETYRV----AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGID--LSTGLPRKLTLKGGEVREAL 250 (344)
T ss_dssp HHHHHHHHHCE----ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEE--TTTTEEEEEEEEHHHHHHHT
T ss_pred HHHHHHHHhCc----ccC---------HHHHHHHHHHHhccCccccCCcceEEEeccc--cCCCCceeEEEeHHHHHHHH
Confidence 99999877642 221 4689999999997643 234443211 11224578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCC--cCCc-ceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhc
Q psy5911 311 EDLISKSLKPCEVALNDAKID--KSKI-SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~ 384 (1242)
+|.++++.+.|+++|+.++.. ...+ +.|+|+||+|++|+|+++|++.|+.++....||+++||+||+++++.++
T Consensus 251 ~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 251 RSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999999999987532 1224 7899999999999999999999999888899999999999999998655
No 20
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=2e-38 Score=332.84 Aligned_cols=212 Identities=57% Similarity=0.901 Sum_probs=206.8
Q ss_pred EEeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCc
Q psy5911 1031 LLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGV 1110 (1242)
Q Consensus 1031 ~~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~ 1110 (1242)
++.||+|+||||++.+|.|.++||||++||++++++|+|..|||+.+.|++|||++..+.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEEcCCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHh
Q psy5911 1111 PQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKN 1190 (1242)
Q Consensus 1111 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~ 1190 (1242)
++|+|+|++|.||+|+|+|.++.||++.+++|.++.+||++||++|++++++++++|+..+++.+++|.||+|+|++++.
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~ 161 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQ 161 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1191 LKDENTKITDEEKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1191 l~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
|+++..++++++++++..+++++++||++++.++|++++++|+..+.||+.|
T Consensus 162 l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~~~~~i~~~~~~L~~~~~~i~~~ 213 (219)
T 4e81_A 162 VEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEI 213 (219)
T ss_dssp HHHHGGGSCHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHhhhhCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9888889999999999999999999999999999999999999999999864
No 21
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.4e-36 Score=351.52 Aligned_cols=314 Identities=24% Similarity=0.345 Sum_probs=239.3
Q ss_pred cccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC-Cc-EEEcHHHHHHhhhCCcchhhHHHHhcCCCCCC
Q psy5911 643 YPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED-NR-IIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 720 (1242)
Q Consensus 643 ~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~-~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d 720 (1242)
..++|||+||+++++++..+| .++ .+||+|+|.++ ++ .++|++|+.....+|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~----------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI----------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE-----------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE-----------
Confidence 357899999999999875433 333 27999999876 44 479999998777777665321
Q ss_pred hhHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHH
Q psy5911 721 EIVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGK 800 (1242)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~ 800 (1242)
+|+. +|. +. ....+++++++++++++.. ..++ ...+|||||++|++.||+++++|++
T Consensus 63 ---------~p~~-----~g~----i~-~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~ 119 (344)
T 1jce_A 63 ---------RPMR-----DGV----IA-DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGL 119 (344)
T ss_dssp ---------CCEE-----TTE----ES-SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------ecCC-----CCe----eC-ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1221 110 00 0112455555555554432 1233 4789999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHH
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINH 880 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~ 880 (1242)
.||++++.+++||+|||++|+.... .+..++|||+||||||+++++... . + ..++..+||.+||+.|.++
T Consensus 120 ~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~----~----~-~~~~~~lGG~~id~~l~~~ 189 (344)
T 1jce_A 120 EAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGS----I----V-TWESIRIAGDEMDEAIVQY 189 (344)
T ss_dssp HTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTE----E----E-EEEEESCSHHHHHHHHHHH
T ss_pred HcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCC----E----E-eeCCCCccChhHHHHHHHH
Confidence 9999999999999999999987654 456789999999999999998643 1 1 2456789999999999999
Q ss_pred HHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCce------eeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHH
Q psy5911 881 LIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ------TDINLPYITADKNGPKHLNVKITRSKLESLVEDLI 954 (1242)
Q Consensus 881 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~ 954 (1242)
+.++++.... ...||++|+.|+.... ..+.++.. +..++.+..++|+|++|+++++|.+
T Consensus 190 l~~~~~~~~~-------------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~i~~~~~~~~~~~~~ 254 (344)
T 1jce_A 190 VRETYRVAIG-------------ERTAERVKIEIGNVFPSKENDELETTVSGI--DLSTGLPRKLTLKGGEVREALRSVV 254 (344)
T ss_dssp HHHHHCEECC-------------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEE--ETTTTEEEEEEEEHHHHHHHTHHHH
T ss_pred HHHHhCcccC-------------HHHHHHHHHHHhccCccccCCcceEEEecc--ccCCCCceeEEEeHHHHHHHHHHHH
Confidence 9887643211 4689999999987642 24444321 1122345788999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC--ccCc-ceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhc
Q psy5911 955 SKSLKPCEVALNDAKID--KSKI-SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 955 ~~~~~~i~~~l~~~~~~--~~~i-~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
+++.+.|.++|++++.. ...+ +.|+|+||+|++|.++++|++.|+.++....||+++||+||+++|+.++
T Consensus 255 ~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 255 VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 99999999999987632 1224 7899999999999999999999999888899999999999999998655
No 22
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=3.1e-35 Score=312.72 Aligned_cols=210 Identities=37% Similarity=0.597 Sum_probs=203.9
Q ss_pred eecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcCE
Q psy5911 1033 LDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQ 1112 (1242)
Q Consensus 1033 ~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~~ 1112 (1242)
.|++|++|||++.+|.|.+|||||++||++++++|++..|+|+.+.|++|||++..+.+|..||+|.|.|+||.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHHHHHhhh
Q psy5911 1113 IEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISIVKKNLK 1192 (1242)
Q Consensus 1113 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~~~~~l~ 1192 (1242)
|+|+|++|.||+|+|++.+..+|++.+++|..+.+||++++++|+++++++.++|+..+++.+++|.||+|+|.+++.|+
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~ 160 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALA 160 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999998
Q ss_pred hccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1193 DENTKITDEEKESIEKSISNLELLIKGDDIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1193 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
++..++++++++++..+|+++++||++++.++|++++++|+..+.||+.|
T Consensus 161 ~~~~~~~~~~k~~i~~~l~~~~~wl~~~d~~~~~~~~~~L~~~~~~i~~r 210 (227)
T 1u00_A 161 ADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAAR 210 (227)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999889999999999999999999864
No 23
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.1e-31 Score=269.21 Aligned_cols=165 Identities=58% Similarity=0.825 Sum_probs=154.9
Q ss_pred ccceEEeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCC
Q psy5911 1027 VKDVLLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPA 1106 (1242)
Q Consensus 1027 ~~~~~~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~ 1106 (1242)
...+.+.|++|+||||++.+|.|.++||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEEEEEcCCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHHHHHHH
Q psy5911 1107 PRGVPQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEADSTISI 1186 (1242)
Q Consensus 1107 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le~~~~~ 1186 (1242)
|+|.++|+|+|++|.||+|+|+|.++.||++.+++|..+.+||++|+++|++++++++++|++.+++.+++|+||+|+|+
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~ 176 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHD 176 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred HHHhh
Q psy5911 1187 VKKNL 1191 (1242)
Q Consensus 1187 ~~~~l 1191 (1242)
+|+.|
T Consensus 177 ~~~~l 181 (182)
T 3n8e_A 177 TETKM 181 (182)
T ss_dssp CSCCC
T ss_pred HHHhh
Confidence 98765
No 24
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.96 E-value=2.6e-28 Score=256.01 Aligned_cols=154 Identities=69% Similarity=1.046 Sum_probs=149.6
Q ss_pred EEEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCc
Q psy5911 391 LLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGV 470 (1242)
Q Consensus 391 ~~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~ 470 (1242)
++.|++|+||||++.+|.|.+|||||++||++++++|++..|||+.+.|+||||++.++.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 471 PQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 471 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
++|+|+|++|.||+|+|+|.++.||++..++|.++.+|+++++++|++++++++++|+..+++.+++|+++.++
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i 155 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLL 155 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988899999999999999999999999999999999997765
No 25
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.96 E-value=4e-29 Score=246.51 Aligned_cols=150 Identities=55% Similarity=0.831 Sum_probs=145.4
Q ss_pred EeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcC
Q psy5911 1032 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 1111 (1242)
Q Consensus 1032 ~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~ 1111 (1242)
+.|++|+|||+++.+|.|.++||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCeeEEEEEEecCCCceEEEEEccC-CCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHH
Q psy5911 1112 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEAD 1181 (1242)
Q Consensus 1112 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le 1181 (1242)
+|+|+|++|.||+|+|+|.++.||++.+++|..+ .+||++|+++|++++++|+++|+..+++.+++|+||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999987 579999999999999999999999999999999876
No 26
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.96 E-value=2.4e-29 Score=247.34 Aligned_cols=150 Identities=49% Similarity=0.803 Sum_probs=142.3
Q ss_pred EeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcC
Q psy5911 1032 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 1111 (1242)
Q Consensus 1032 ~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~ 1111 (1242)
+.|++|+|||+++.+|.|.++||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCeeEEEEEEecCCCceEEEEEccCCC-CCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHH
Q psy5911 1112 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGG-LSEIEIENMIKDAELNSELDKKFEELVKCKNEAD 1181 (1242)
Q Consensus 1112 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~-l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le 1181 (1242)
+|+|+|++|.||+|+|+|.++.||++.+++|..+.+ ||++|+++|++++++++++|++.+++.+++|+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999998765 9999999999999999999999999999999875
No 27
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=1.8e-29 Score=248.00 Aligned_cols=150 Identities=64% Similarity=0.941 Sum_probs=144.8
Q ss_pred EeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcC
Q psy5911 1032 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 1111 (1242)
Q Consensus 1032 ~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~ 1111 (1242)
+.|++|+|||+++.+|.|.++||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCeeEEEEEEecCCCceEEEEEccCCCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHH
Q psy5911 1112 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEAD 1181 (1242)
Q Consensus 1112 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le 1181 (1242)
+|+|+|++|.||+|+|+|.++.||++.+++|..+.+||++|+++|++++++|+++|++.+++.+++|+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988889999999999999999999999999999999875
No 28
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.96 E-value=6.1e-28 Score=243.90 Aligned_cols=158 Identities=59% Similarity=0.839 Sum_probs=147.0
Q ss_pred ccceEEEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCC
Q psy5911 387 VKDVLLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPA 466 (1242)
Q Consensus 387 ~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~ 466 (1242)
...+.+.|++|+||||++.+|.|.+|||||++||++++++|++..|||+.+.|.+|||++..+.+|..||+|.|.++||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 467 PRGVPQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 467 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|+|.++|+|+|++|.||+|+|+|.++.||++..++|..+.+|+++++++|++++++++++|+..+++.+++|+++.++
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~i 174 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGII 174 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988889999999999999999999999999999999995554
No 29
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.95 E-value=5.3e-28 Score=238.51 Aligned_cols=149 Identities=55% Similarity=0.830 Sum_probs=142.2
Q ss_pred EEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcC
Q psy5911 392 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 471 (1242)
Q Consensus 392 ~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 471 (1242)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|||+.+.|.+|||++..+.+|.+||+|.|.++||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecC-CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHH
Q psy5911 472 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQ 540 (1242)
Q Consensus 472 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~ 540 (1242)
+|+|+|++|.||+|+|+|.++.||++..++|..+ ++|+++++++|++++++++++|+..++..+++|++
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~l 151 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKL 151 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999977 67999999999999999999999988888777654
No 30
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.95 E-value=3.1e-28 Score=239.47 Aligned_cols=148 Identities=49% Similarity=0.794 Sum_probs=137.2
Q ss_pred EEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcC
Q psy5911 392 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 471 (1242)
Q Consensus 392 ~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 471 (1242)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|||+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecCC-CCchHHHHHHHHHHHhhchhhhhHHHHHHHHHH
Q psy5911 472 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSG-GLSEIEIENMIKDAELNSELDKKFEELVKCKNE 539 (1242)
Q Consensus 472 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~-~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~ 539 (1242)
+|+|+|++|.||+|+|+|.++.||++..++|..+. +|+++++++|++++++++++|+..++..+++|+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~ 150 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQ 150 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSE
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Confidence 99999999999999999999999999999999775 599999999999999999999988777665554
No 31
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.95 E-value=2e-28 Score=240.56 Aligned_cols=147 Identities=65% Similarity=0.944 Sum_probs=137.9
Q ss_pred EEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcC
Q psy5911 392 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 471 (1242)
Q Consensus 392 ~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 471 (1242)
+.|++|+|||+++.+|.|.+|||||++||++++++|++..|||+.+.|.+|||++..+.+|.+||+|.|.++||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHH
Q psy5911 472 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKN 538 (1242)
Q Consensus 472 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~ 538 (1242)
+|+|+|++|.||+|+|+|.++.||++..++|..+.+|+++++++|++++++++++|+..++..+++|
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n 148 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVIN 148 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 9999999999999999999999999999999988899999999999999999999887665544443
No 32
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=99.94 E-value=5e-27 Score=237.58 Aligned_cols=144 Identities=15% Similarity=0.233 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC--cchhhhHHHHHH
Q psy5911 532 ELVKCKNEQIIILEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS--NQTKESEIIFLI 609 (1242)
Q Consensus 532 e~~e~~~~~~~~~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~--~~~~~~~g~~~~ 609 (1242)
++.+++.++ ..++++|+|+.|+++|+|||++||++++++||+++|+++||||+|||+||+++... +..++.+|++||
T Consensus 67 ~l~~l~~e~-~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~~~~~~~l~eGvemi 145 (213)
T 4ani_A 67 QIAELEAKL-SEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETDNEQAKSILQGMEMV 145 (213)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCCSCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 334444444 33469999999999999999999999999999999999999999999999987654 345899999999
Q ss_pred HHHHHHHHHhccceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEe
Q psy5911 610 FKLIKKFYKKFNIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYT 684 (1242)
Q Consensus 610 ~~~~~~~~~~~g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~ 684 (1242)
+++|.++|+++||++|++.|++|||++||||++.+..+.+ .++|+.|+|+|= . -.++-.-|+.|...
T Consensus 146 ~k~l~~~L~k~Gv~~I~~~Ge~FDP~~HeAv~~v~~~~~~---~gtVv~V~qkGY--~---l~dRVLRpA~V~Va 212 (213)
T 4ani_A 146 YRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYE---PNTVVEELQKGY--K---LKDRVLRPAMVKVS 212 (213)
T ss_dssp HHHHHHHHHHTTEECCCCSSSCCCTTTEEEEEEECCSSSC---SSSEEEEEECCC--E---ETTSCCSCEEEEEE
T ss_pred HHHHHHHHHHCCCEEeCCCCCCCCHHHceeeeeecCCCCC---CCcEEEEEeCCe--E---ECCEEeeceEEEeC
Confidence 9999999999999999999999999999999987765555 556999999992 1 12334458877653
No 33
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.94 E-value=1.3e-26 Score=230.96 Aligned_cols=150 Identities=53% Similarity=0.800 Sum_probs=144.5
Q ss_pred EeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCCCCCcC
Q psy5911 1032 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 1111 (1242)
Q Consensus 1032 ~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~~~g~~ 1111 (1242)
+.|++|++||+++.+|.|.+|||||++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCeeEEEEEEecCCCceEEEEEccC-CCCCHHHHHHHHHHHHhhhHhhHhhHHHHHhhhhHH
Q psy5911 1112 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNEAD 1181 (1242)
Q Consensus 1112 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~~e~~~~~~~~~~~~~~d~~~~~~~~~~n~le 1181 (1242)
+|+|+|++|.||+|+|++.+..+|++..++|..+ .+|+++|+++|++++++|+.+|+..+++.+++|+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999887 469999999999999999999999999999999875
No 34
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.94 E-value=5.8e-25 Score=233.68 Aligned_cols=152 Identities=45% Similarity=0.683 Sum_probs=147.4
Q ss_pred EeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcCE
Q psy5911 393 LDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVPQ 472 (1242)
Q Consensus 393 ~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~ 472 (1242)
.|++|+||||++.+|.|.+|||||++||++++++|++..|+|+.+.|++|||++.++.+|..||+|.|.|+||+|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeeEEEEEEEcCCCcEEEEEEecCCCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHHHHHHH
Q psy5911 473 IEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGLSEIEIENMIKDAELNSELDKKFEELVKCKNEQIIIL 544 (1242)
Q Consensus 473 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~~~~~~ 544 (1242)
|+|+|++|.||+|+|++.+..+|++..++|..+.+|+++++++|++++++++++|...++..+++|++++++
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i 152 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVL 152 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988889999999999999999999999999999999997775
No 35
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=99.93 E-value=1.4e-26 Score=235.08 Aligned_cols=134 Identities=22% Similarity=0.327 Sum_probs=113.8
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCC---cchhhhHHHHHHHHHHHHHHHhc
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDS---NQTKESEIIFLIFKLIKKFYKKF 620 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~ 620 (1242)
++++|+|..|+++|+|||+++|++++++||+++|+++||||+||||||+++... ...++.+|++||+++|.++|+++
T Consensus 58 ~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~~~~~~~l~~Gv~~~~~~l~~~L~~~ 137 (197)
T 1dkg_A 58 ERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEDIELTLKSMLDVVRKF 137 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHHSHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC
Confidence 458999999999999999999999999999999999999999999999988642 24678999999999999999999
Q ss_pred cceecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEec
Q psy5911 621 NIKQISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTE 685 (1242)
Q Consensus 621 g~~~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~ 685 (1242)
||++|++.|++|||++||||++.+..+.+ .++++.|+|+|=. -.++-.-|+.|....
T Consensus 138 Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~---~~tVv~v~qkGY~-----l~dRvLRpA~V~V~~ 194 (197)
T 1dkg_A 138 GVEVIAETNVPLDPNVHQAIAMVESDDVA---PGNVLGIMQKGYT-----LNGRTIRAAMVTVAK 194 (197)
T ss_dssp TEEEECCCSSBCCTTSEEEEEEEECSSSC---TTBEEEEEECEEE-----ETTEEEECEEEEEEE
T ss_pred CCEEeCCCCCCCCHHHhheeeeecCCCCC---cCeEEEEeeCCee-----eCCEEecceEEEecC
Confidence 99999999999999999999987765555 4569999999921 122333478777653
No 36
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.93 E-value=1e-26 Score=266.66 Aligned_cols=231 Identities=17% Similarity=0.132 Sum_probs=170.7
Q ss_pred cCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEE--EEecCCCCHHHHHHHHHHHHHc--------C------CCeeeee
Q psy5911 107 KDKKLAPPQISAEILKKMKSTAETFLNEKIEKAV--ITVPAYFNDSQRQATKDAGKIA--------G------LEVLRII 170 (1242)
Q Consensus 107 ~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~v--itVPa~f~~~qr~~~~~Aa~~A--------G------l~~~~li 170 (1242)
.+..+.++...++++..|+..++.....+ .++| |+||++|++.||+++++|+..+ | ++.++++
T Consensus 91 ~~~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 34456677788888888877653333333 5699 9999999999999999997775 4 3558899
Q ss_pred chHHHHHHHhc--cCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHh
Q psy5911 171 NEPTAAALAYG--LDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIE 248 (1242)
Q Consensus 171 ~Ep~AAal~y~--~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~ 248 (1242)
+||+|||++|. ........+++|+|+||||||++++++.+ +. .+.+..++..+||.+|++.|.+++..++.
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~----g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g-- 242 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMD----ME-PVVELSFSLQIGVGDAISALSRKIAKETG-- 242 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTT----TE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC--
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecC----CE-EEeecCCCcchhHHHHHHHHHHHHHHHhC--
Confidence 99999999982 11122347889999999999999998654 44 45555677889999999999888776654
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHH
Q psy5911 249 NGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKL-ESLVEDLISKSLKPCEVALND 327 (1242)
Q Consensus 249 ~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~f-e~l~~~~~~~i~~~i~~~l~~ 327 (1242)
... .. . ...+| .. ..+.+. + . .++++++ +++++++++++.+.+++.|++
T Consensus 243 --~~~--~i-~----~~~~e-------~~--~~~~~~-------g-~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~ 292 (346)
T 2fsj_A 243 --FVV--PF-D----LAQEA-------LS--HPVMFR-------Q-K----QVGGPEVSGPILEDLANRIIENIRLNLRG 292 (346)
T ss_dssp --CCC--CH-H----HHHHH-------TT--SCEEET-------T-E----EECSHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred --CCc--CC-C----HHHHh-------cC--CeEeEC-------C-c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 310 00 0 11222 01 112221 1 1 3568999 999999999999999999987
Q ss_pred cCCCcCCcceEEEecCccChHHHHHHHHHhccccccc---CCCcchhhHhHHHHhhh
Q psy5911 328 AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK---DINPDEAVAVGASVQAG 381 (1242)
Q Consensus 328 ~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~---~~~p~~ava~GAa~~a~ 381 (1242)
+ .+.++.|+|+||+|++ +++.+++.|+. ... ..||++|+|+|+..++.
T Consensus 293 ~---~~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 293 E---VDRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp G---GGGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred h---hhcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 6 4568999999999999 99999999973 334 67999999999987754
No 37
>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}
Probab=99.93 E-value=1.9e-26 Score=229.01 Aligned_cols=131 Identities=15% Similarity=0.279 Sum_probs=114.3
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhccCCcchhhhHHHHHHHHHHHHHHHhccce
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMFAKNFDSNQTKESEIIFLIFKLIKKFYKKFNIK 623 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 623 (1242)
++++|+|..||++|+|||+++|++++++||.++|+++||||+||||||+++.+.+..++.+|++||+++|.++|+++||+
T Consensus 38 ~~d~~lR~~Ae~eN~rkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~~~~~l~~Gv~m~~~~l~~~L~k~Gv~ 117 (177)
T 3a6m_A 38 LKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRALEFAEASPESIRQGVRAIRDGFFRILAGLGVE 117 (177)
T ss_dssp HHHHHHTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 46889999999999999999999999999999999999999999999998865555679999999999999999999999
Q ss_pred ecccCCCCCCcCccccccccccccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEec
Q psy5911 624 QISETGVLFNPDIHEAIGIYPTFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTE 685 (1242)
Q Consensus 624 ~i~~~g~~fdp~~h~a~~~~~~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~ 685 (1242)
+|++.|++|||++||||++.+. + .++++.|+|+|=. -.+.-.-|+.|....
T Consensus 118 ~i~~~Ge~FDP~~HeAv~~~~~---~---~gtVv~v~qkGY~-----l~dRvLRpA~V~V~~ 168 (177)
T 3a6m_A 118 EVPGEGEAFDPRYHEAVGLLPG---E---PGKVAKVFQRGFR-----MGEALVRPARVAVGE 168 (177)
T ss_dssp ECCCTTSBCCTTTEEEEEEEES---S---TTBEEEEEECCEE-----ETTEEEECEEEEEEE
T ss_pred EeCCCCCCCCHHHhhhhhcccC---C---cCeEEEEeecCee-----eCCEEecCeEEEEeC
Confidence 9999999999999999997654 3 5679999999921 123334488887764
No 38
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.93 E-value=1.7e-25 Score=222.93 Aligned_cols=148 Identities=53% Similarity=0.808 Sum_probs=139.0
Q ss_pred EEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCCCCCcC
Q psy5911 392 LLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPAPRGVP 471 (1242)
Q Consensus 392 ~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 471 (1242)
+.|++|++||+++.+|.|.+||+||++||++++++|++..|||+.+.|.+|||++..+.+|..||+|.|.++||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecC-CCCchHHHHHHHHHHHhhchhhhhHHHHHHHHHH
Q psy5911 472 QIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSS-GGLSEIEIENMIKDAELNSELDKKFEELVKCKNE 539 (1242)
Q Consensus 472 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~-~~l~~eei~~~~~~~~~~~~~d~~~~e~~e~~~~ 539 (1242)
+|+|+|++|.||+|+|++.+..+|++..++|..+ .+|++++++++++++++++.+|+..++..+++|+
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~ 150 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNE 150 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSE
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhh
Confidence 9999999999999999999999999999999877 5699999999999999999988887776665553
No 39
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.92 E-value=2.3e-25 Score=261.08 Aligned_cols=300 Identities=14% Similarity=0.182 Sum_probs=196.3
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCChH
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 82 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 82 (1242)
..++|||+||++++++++.+|.+.+. ..|...+||... . ++ ...++..+...+|+++++.
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~-~-~g-----------~i~d~~~~~~~ik~~~~~~----- 72 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL-M-EG-----------MVAEPAALAQEIKELLLEA----- 72 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE-E-TT-----------EESCHHHHHHHHHHHHHHH-----
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc-c-CC-----------CcCCHHHHHHHHHHHHHHc-----
Confidence 35899999999999999887765542 234555566432 1 12 2356677788888887741
Q ss_pred HHHHhccCCeEEEecCCCCe-EEEEcCeecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHH----------
Q psy5911 83 VQTVLKMVPYKIVAADNGDA-WVEVKDKKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQ---------- 151 (1242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~q---------- 151 (1242)
..+.... .+.-....+ ...+....++++++... ++..++++++.++.+++|.+| +.+.+
T Consensus 73 ---~~~~~~v-~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~--~~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 73 ---RTRKRYV-VTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFA--PLTPLSEVQEGEQVQ 142 (377)
T ss_dssp ---TCCCCEE-EEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEE--ESSCGGGSCTTSEEE
T ss_pred ---CCCcceE-EEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEE--EeCCCCCCCCcceeE
Confidence 0000001 111111111 11122245777777653 345778889999999999998 33332
Q ss_pred ----------HHHHHHHHHHcCCCeeeeechHHHHHHHhccCC-CCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEE
Q psy5911 152 ----------RQATKDAGKIAGLEVLRIINEPTAAALAYGLDK-KPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVL 220 (1242)
Q Consensus 152 ----------r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~-~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~ 220 (1242)
.+++++|++.|||++..++.||+|||++|+... ...+..++|+|+||||||+++++.. .+.
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g------~~~-- 214 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGD------KPL-- 214 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETT------EEE--
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECC------EEE--
Confidence 388999999999999999999999999986432 2345678999999999999999732 221
Q ss_pred EecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccCCCCCeeeEEE
Q psy5911 221 STNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVK 300 (1242)
Q Consensus 221 ~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~ 300 (1242)
..++..+||.+||+.|.+. ++.+ ...||++|+.++............... ......
T Consensus 215 -~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~----~~~~~~ 270 (377)
T 2ych_A 215 -AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDF----DAERER 270 (377)
T ss_dssp -EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------
T ss_pred -EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhccccccccccccccccc----cccccc
Confidence 2356789999999999873 2222 468999999998643221110000000 113457
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcCCcceEEEecCccChHHHHHHHHHhccccccc
Q psy5911 301 ITRSKLESLVEDLISKSLKPCEVALND--AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK 364 (1242)
Q Consensus 301 itr~~fe~l~~~~~~~i~~~i~~~l~~--~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~ 364 (1242)
++|++|+++++|.++++...|++.|+. ++.....++.|+|+||+|++|.+++.+++.|+.++..
T Consensus 271 i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~ 336 (377)
T 2ych_A 271 YSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEP 336 (377)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEe
Confidence 899999999999999999999999985 3555667999999999999999999999999876554
No 40
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=6.5e-24 Score=236.83 Aligned_cols=206 Identities=24% Similarity=0.352 Sum_probs=176.0
Q ss_pred cChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcE
Q psy5911 111 LAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRI 190 (1242)
Q Consensus 111 ~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~ 190 (1242)
+...+....+|+++++.++.+.+.....+++|+|++|+..+|++++++++.+|+++..++.||+|++++|+...
T Consensus 67 i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~------ 140 (272)
T 3h1q_A 67 VVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIND------ 140 (272)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSS------
T ss_pred EEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCCC------
Confidence 33456778899999999998888888999999999999999999999999999999999999999999997632
Q ss_pred EEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q psy5911 191 IVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKA 270 (1242)
Q Consensus 191 vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 270 (1242)
.+|+|+||||++++++.- +.+. ......+||.+||+.+.+++. .+ ...+|++
T Consensus 141 ~~viDiGggst~~~~~~~------g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~ 192 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEK------GKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETI 192 (272)
T ss_dssp EEEEEECSSCEEEEEEET------TEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHH
T ss_pred EEEEEECCCcEEEEEEEC------CEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHH
Confidence 489999999999999862 2221 346678999999999988763 11 4578899
Q ss_pred hHHhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHH
Q psy5911 271 KIELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLV 350 (1242)
Q Consensus 271 K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v 350 (1242)
|+.++ +++++++++.+.++++...+.+.++..+ +++.|+|+||+|++|.+
T Consensus 193 k~~~~--------------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l 242 (272)
T 3h1q_A 193 KKDFS--------------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGF 242 (272)
T ss_dssp HHSST--------------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTH
T ss_pred HHhcC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhH
Confidence 98765 5889999999999999999999998664 47899999999999999
Q ss_pred HHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 351 QKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 351 ~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
++++++.|+.++..+.+|++++|+|||++|
T Consensus 243 ~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 243 SEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 999999999999999999999999999875
No 41
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=1.5e-24 Score=252.80 Aligned_cols=298 Identities=15% Similarity=0.158 Sum_probs=200.9
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC---------CcEEEcHHHHHhhhhCCCchhhhchhhh
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED---------NRIIVGLPAKRQAITNPNNTLYAIKRLI 74 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---------~~~~vG~~A~~~~~~~~~~~~~~~k~~l 74 (1242)
..|+||+||+++++++..++.|..+ +||+|+.... ...++|++|.... . ...+++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~~~~~~-- 69 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--ILTLKY-- 69 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----T--SEEEEC--
T ss_pred ceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----c--ccceec--
Confidence 4689999999999999866655422 2555544322 3467888887531 0 011111
Q ss_pred CCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCC--CCcEEEEecCCCCHHHH
Q psy5911 75 GRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEK--IEKAVITVPAYFNDSQR 152 (1242)
Q Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~--~~~~vitVPa~f~~~qr 152 (1242)
| +.+..+.-.+....+++++.. +.++.. ...++||+|++++..+|
T Consensus 70 ----------------P--------------i~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r 116 (375)
T 2fxu_A 70 ----------------P--------------IEHGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANR 116 (375)
T ss_dssp ----------------S--------------EETTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHH
T ss_pred ----------------c--------------ccCCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHH
Confidence 1 122333445566666666653 223332 34699999999999999
Q ss_pred HHHHHHH-HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchH
Q psy5911 153 QATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGE 231 (1242)
Q Consensus 153 ~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 231 (1242)
+++.+++ +.+|++.+.+++||+|||++|+. .+.+|+|+||||||++.+. + + +.+....+...+||+
T Consensus 117 ~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v~--~----G-~~~~~~~~~~~~GG~ 183 (375)
T 2fxu_A 117 EKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPIY--E----G-YALPHAIMRLDLAGR 183 (375)
T ss_dssp HHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEEE--T----T-EECGGGCEEESCCHH
T ss_pred HHHHHHHHHhcCcceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEeE--C----C-EEeccceEEeccCHH
Confidence 9888764 88899999999999999999985 3579999999999998774 2 3 223333445689999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcC----------------CceeeeeccccccCCCCCe
Q psy5911 232 DFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSN----------------AEQTDINLPYITADKNGPK 295 (1242)
Q Consensus 232 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~----------------~~~~~i~i~~~~~~~~~~~ 295 (1242)
++|+.|.+++..+. + .+.. . .-...+|++|+.++. .....+.+|.
T Consensus 184 ~lt~~l~~~l~~~~---~--~~~~-~----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpd--------- 244 (375)
T 2fxu_A 184 DLTDYLMKILTERG---Y--SFVT-T----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPD--------- 244 (375)
T ss_dssp HHHHHHHHHHHHHT---C--CCCS-H----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTT---------
T ss_pred HHHHHHHHHHHhcC---C--CCCc-H----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCC---------
Confidence 99999999997651 1 2211 0 012345556655532 2233344431
Q ss_pred eeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCC--CcCCcceEEEecCccChHHHHHHHHHhcc------
Q psy5911 296 HLNVKITRSKLE---SLVEDL-----ISKSLKPCEVALNDAKI--DKSKISEIILVGGQTRMPLVQKMVSEFFE------ 359 (1242)
Q Consensus 296 ~~~~~itr~~fe---~l~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~ip~v~~~l~~~f~------ 359 (1242)
...+.++++.|+ .+++|. ...+.++|.+.|..+.. ....++.|+|+||+|++|.++++|++.++
T Consensus 245 g~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~ 324 (375)
T 2fxu_A 245 GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPST 324 (375)
T ss_dssp SCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTT
T ss_pred CCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCC
Confidence 135788988883 344543 24577888888886532 23346889999999999999999998875
Q ss_pred --cccccCCCcchhhHhHHHHhhhh
Q psy5911 360 --KEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 360 --~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
.++..+.+|..++++||+++|..
T Consensus 325 ~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 325 MKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp CCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred eeEEEEcCCCCCccEEcchHHhhCc
Confidence 34456789999999999999973
No 42
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.91 E-value=3.5e-24 Score=254.09 Aligned_cols=308 Identities=17% Similarity=0.163 Sum_probs=206.0
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecCC-----------------cEEEcHHHHHhhhhCCCch
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDN-----------------RIIVGLPAKRQAITNPNNT 66 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~-----------------~~~vG~~A~~~~~~~~~~~ 66 (1242)
.+|+||+||+++++++..++.|.. .+||+|+...+. ..++|++|... + +
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~--------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~-~- 71 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTEPQF--------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----P-T- 71 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSE--------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC----T-T-
T ss_pred CeEEEECCCCeEEEeeCCCCCCCC--------cCCceEEEECcccccccccccccccccccCeEEChHHHhc----C-C-
Confidence 579999999999999976555542 357777765321 24455544331 0 0
Q ss_pred hhhchhhhCCCCCChHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcC--CCCcEEEEec
Q psy5911 67 LYAIKRLIGRKYTDEIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNE--KIEKAVITVP 144 (1242)
Q Consensus 67 ~~~~k~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~--~~~~~vitVP 144 (1242)
..++ ..+....+...+....+++++.. +.++. ....++||+|
T Consensus 72 -~~~~--------------------------------~pi~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p 115 (418)
T 1k8k_A 72 -YATK--------------------------------WPIRHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLTEP 115 (418)
T ss_dssp -SEEE--------------------------------CCEETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEEEC
T ss_pred -CEEe--------------------------------ccccCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEEeC
Confidence 1111 11223334445555566666653 23432 2457999999
Q ss_pred CCCCHHHHHHHHHHH-HHcCCCeeeeechHHHHHHH-hccCC-CCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEE
Q psy5911 145 AYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALA-YGLDK-KPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLS 221 (1242)
Q Consensus 145 a~f~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~-y~~~~-~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~ 221 (1242)
++|+..+|++|.+++ +.+|++.+.+++||+||+++ |.... ...+.+.+|+|+||||||++++.- +. .+..
T Consensus 116 ~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~~------G~-~~~~ 188 (418)
T 1k8k_A 116 PLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE------GY-VIGS 188 (418)
T ss_dssp TTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEET------TE-ECGG
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeEC------CE-Eccc
Confidence 999999999999999 88999999999999999988 52111 111226799999999999999852 22 2323
Q ss_pred ecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCce-----------------eeeec
Q psy5911 222 TNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ-----------------TDINL 284 (1242)
Q Consensus 222 ~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----------------~~i~i 284 (1242)
..+...+||+++|+.|.++|..++. ..+.. .-...+|++|+.++.... ..+.+
T Consensus 189 ~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~-------~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~l 258 (418)
T 1k8k_A 189 CIKHIPIAGRDITYFIQQLLRDREV---GIPPE-------QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTG 258 (418)
T ss_dssp GCEEESCSHHHHHHHHHHHHHTTCC---CCCGG-------GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEE
T ss_pred ceEEEeCcHHHHHHHHHHHHHhcCC---CCCCH-------HHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEEC
Confidence 3356789999999999999876532 11110 113567888888764321 22333
Q ss_pred cccccCCCCCeeeEEEEcHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--CcCCcceEEEecCccChHHHHHH
Q psy5911 285 PYITADKNGPKHLNVKITRSKL---ESLVEDLI------SKSLKPCEVALNDAKI--DKSKISEIILVGGQTRMPLVQKM 353 (1242)
Q Consensus 285 ~~~~~~~~~~~~~~~~itr~~f---e~l~~~~~------~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~ip~v~~~ 353 (1242)
|. ...+....+++++++| |.+++|.+ ..+.++|.+.|..+.. ....++.|+|+||+|++|.++++
T Consensus 259 pd----~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~r 334 (418)
T 1k8k_A 259 IN----AISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRR 334 (418)
T ss_dssp EC----TTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHH
T ss_pred CC----CCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHH
Confidence 32 1223456789999999 55555542 5688889999987653 34457899999999999999999
Q ss_pred HHHhcccc------------------------cccCCCcchhhHhHHHHhhhh
Q psy5911 354 VSEFFEKE------------------------VKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 354 l~~~f~~~------------------------~~~~~~p~~ava~GAa~~a~~ 382 (1242)
|++.++.. +..+.+|..++.+||+++|..
T Consensus 335 l~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 335 LQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 98766321 233457889999999999864
No 43
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.90 E-value=1.3e-24 Score=249.19 Aligned_cols=230 Identities=17% Similarity=0.129 Sum_probs=170.2
Q ss_pred CeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEE--EEecCCCCHHHHHHHHHHHHHc--------C------Cceeeeec
Q psy5911 748 DQYCAPPQISAEILKKMKSTAETFLNEKIEKAV--ITVPAYFNDSQRQATKDAGKIA--------G------LEVLRIIN 811 (1242)
Q Consensus 748 ~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~~~~Aa~~A--------G------l~~~~li~ 811 (1242)
+..+.++...++++..|+..++...+.+ .++| ++||++|++.||+++++++..+ | +..+++++
T Consensus 92 ~~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~ 170 (346)
T 2fsj_A 92 DGRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP 170 (346)
T ss_dssp TTCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred CCcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence 3445667788888888887653333333 5699 9999999999999999997765 4 35588999
Q ss_pred hhHHHHHHc--cCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhc
Q psy5911 812 EPTAAALAY--GLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIEN 889 (1242)
Q Consensus 812 Ep~AAal~y--~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~ 889 (1242)
||+|||++| ........+.++|+|+||||||++++++.+ +. .+.+.+++..+||.++++.|.+++..+++...
T Consensus 171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~----g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~ 245 (346)
T 2fsj_A 171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMD----ME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV 245 (346)
T ss_dssp TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTT----TE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC
T ss_pred cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecC----CE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc
Confidence 999999998 211122347899999999999999998754 44 45555677889999999999988777654200
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHhc
Q psy5911 890 GVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKITRSKL-ESLVEDLISKSLKPCEVALNDA 968 (1242)
Q Consensus 890 ~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~f-e~~~~~~~~~~~~~i~~~l~~~ 968 (1242)
++. ...+| . ...+.+. + . .++++++ +++++++++++.+.+++.|+++
T Consensus 246 --~i~---------~~~~e-------~--~~~~~~~-------g-~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~ 293 (346)
T 2fsj_A 246 --PFD---------LAQEA-------L--SHPVMFR-------Q-K----QVGGPEVSGPILEDLANRIIENIRLNLRGE 293 (346)
T ss_dssp --CHH---------HHHHH-------T--TSCEEET-------T-E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred --CCC---------HHHHh-------c--CCeEeEC-------C-c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 110 11222 0 0112221 1 1 3568999 9999999999999999999876
Q ss_pred CCCccCcceEEEecCcCchHHHHHHHHhhhcccccc---cCCcchhhhhhHHHhhh
Q psy5911 969 KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK---DINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 969 ~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~---~~~p~~aVa~GAa~~a~ 1021 (1242)
.+.++.|+|+||+|++ +++.+++.|+. +.. ..||++|+|.|+..++.
T Consensus 294 ---~~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 294 ---VDRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp ---GGGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred ---hhcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 4578999999999999 99999999973 334 67999999999988764
No 44
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.90 E-value=6e-23 Score=240.06 Aligned_cols=197 Identities=15% Similarity=0.131 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcch
Q psy5911 151 QRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGG 230 (1242)
Q Consensus 151 qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG 230 (1242)
..+.+.+|++.|||++..++.||+|||++|.... ..+..++|+|+||||||+++++- +.+.. .++..+||
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-~~~~gv~vvDiGggttdisi~~~------g~~~~---~~~i~~GG 238 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-EKDRGVVVVNLGYNFTGLIAYKN------GVPIK---ISYVPVGM 238 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-HHHHCEEEEEECSSSEEEEEEET------TEEEE---EEEESCCH
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-cccCCEEEEEECCCcEEEEEEEC------CEEEE---EEecccHH
Confidence 4578899999999999999999999999986432 23456899999999999999872 33322 34567999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-----ceeeeeccccccCCCCCeeeEEEEcHHH
Q psy5911 231 EDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA-----EQTDINLPYITADKNGPKHLNVKITRSK 305 (1242)
Q Consensus 231 ~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~i~i~~~~~~~~~~~~~~~~itr~~ 305 (1242)
++||+.|+..+.- ....||++|+.++.. ....+.++.... .....++|++
T Consensus 239 ~~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~------~~~~~is~~~ 293 (419)
T 4a2a_A 239 KHVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG------NTIKTTTAKK 293 (419)
T ss_dssp HHHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS------CSEEEEEHHH
T ss_pred HHHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecCC------ccceEEcHHH
Confidence 9999999875421 156899999998753 334455554321 2467899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC------CcCCcceEEEecCccChHHHHHHHHHhcccccccC--------------
Q psy5911 306 LESLVEDLISKSLKPCEVALNDAKI------DKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKD-------------- 365 (1242)
Q Consensus 306 fe~l~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~-------------- 365 (1242)
|.++++|.++++...+++.|+.++. ....++.|+|+||+|++|.+++++++.||.++...
T Consensus 294 l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~ 373 (419)
T 4a2a_A 294 LSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINAD 373 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcc
Confidence 9999999999999999999999987 34568999999999999999999999998765422
Q ss_pred ---CCcchhhHhHHHHhhhh
Q psy5911 366 ---INPDEAVAVGASVQAGV 382 (1242)
Q Consensus 366 ---~~p~~ava~GAa~~a~~ 382 (1242)
.+|..+.|.|.++++..
T Consensus 374 ~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 374 EVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp HHHTCGGGHHHHHTTCC---
T ss_pred cccCCchHHHHHHHHHHHhh
Confidence 38999999999988754
No 45
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.89 E-value=2.6e-23 Score=243.61 Aligned_cols=298 Identities=14% Similarity=0.178 Sum_probs=196.5
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChhHH
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEIVQ 724 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~~~ 724 (1242)
++|+|+||+++++.++++|++.+. ..|...+||... .+| ...+++.+...+|+++++.-
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~--~~g-----------~i~d~~~~~~~ik~~~~~~~------ 73 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL--MEG-----------MVAEPAALAQEIKELLLEAR------ 73 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE--ETT-----------EESCHHHHHHHHHHHHHHHT------
T ss_pred eEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc--cCC-----------CcCCHHHHHHHHHHHHHHcC------
Confidence 579999999999999887766552 335555665432 122 34577888888999887510
Q ss_pred hhcccCceEEEEcCCCCeE-EEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHH------------
Q psy5911 725 KDIKMVPYKIVAADNGDAW-VEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQ------------ 791 (1242)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q------------ 791 (1242)
...+.. .+.-+...+. ..+....++++++... ++..++.+++.++.+++|.+|. .+.+
T Consensus 74 ~~~~~v---~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v~ 144 (377)
T 2ych_A 74 TRKRYV---VTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQVM 144 (377)
T ss_dssp CCCCEE---EEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEEE
T ss_pred CCcceE---EEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEEE
Confidence 001111 1111111111 1122245777777653 3557788899999999999983 3332
Q ss_pred --------HHHHHHHHHHcCCceeeeechhHHHHHHccCCC-CCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEe
Q psy5911 792 --------RQATKDAGKIAGLEVLRIINEPTAAALAYGLDK-KPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLST 862 (1242)
Q Consensus 792 --------r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~-~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~ 862 (1242)
.+++++|++.|||++..++.||+|||++|+... ...+..++|+|+||||||+++++... + ..
T Consensus 145 ~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~------~---~~ 215 (377)
T 2ych_A 145 VAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDK------P---LA 215 (377)
T ss_dssp EEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTE------E---EE
T ss_pred EEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCE------E---EE
Confidence 388999999999999999999999999986432 22456789999999999999997422 2 12
Q ss_pred cCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEc
Q psy5911 863 NGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKIT 942 (1242)
Q Consensus 863 ~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~it 942 (1242)
.++..+||.+||+.|.+.+ +.+ ...||++|+.++.............. . ......++
T Consensus 216 ~~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~-~---~~~~~~i~ 272 (377)
T 2ych_A 216 VRVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLD-F---DAERERYS 272 (377)
T ss_dssp EEEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC---------------------------
T ss_pred EEeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccc-c---ccccccCC
Confidence 3567799999999998732 221 46899999998754322111000000 0 01345789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCCccCcceEEEecCcCchHHHHHHHHhhhcccccc
Q psy5911 943 RSKLESLVEDLISKSLKPCEVALNDA--KIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKK 1004 (1242)
Q Consensus 943 r~~fe~~~~~~~~~~~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~ 1004 (1242)
|++|+++++|.++++...|++.|+.. +.....++.|+|+||+|++|.+++.+++.|+.++..
T Consensus 273 ~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~ 336 (377)
T 2ych_A 273 PGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEP 336 (377)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEe
Confidence 99999999999999999999999853 455667999999999999999999999999876543
No 46
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.88 E-value=6.8e-22 Score=220.43 Aligned_cols=204 Identities=25% Similarity=0.354 Sum_probs=175.5
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEE
Q psy5911 753 PPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIV 832 (1242)
Q Consensus 753 ~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vl 832 (1242)
..+....+|+++++.++...+.....+++|+|++|+..+|++++.+++.+|+++..++.||+|++++|+... .+
T Consensus 69 d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~------~~ 142 (272)
T 3h1q_A 69 DYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIND------GI 142 (272)
T ss_dssp THHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSS------EE
T ss_pred cHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCCC------EE
Confidence 346778899999999998888888899999999999999999999999999999999999999999998642 48
Q ss_pred EEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhh
Q psy5911 833 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKI 912 (1242)
Q Consensus 833 V~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 912 (1242)
|+|+||||++++++... .+. ......+||.+||+.+.+++. .+ ...+|++|+
T Consensus 143 viDiGggst~~~~~~~g------~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~ 194 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIEKG------KIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKK 194 (272)
T ss_dssp EEEECSSCEEEEEEETT------EEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHH
T ss_pred EEEECCCcEEEEEEECC------EEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHH
Confidence 89999999999998732 221 346678999999999988763 11 457888988
Q ss_pred hccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHH
Q psy5911 913 ELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQK 992 (1242)
Q Consensus 913 ~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~ 992 (1242)
.++ +++++++++.+.++++...+.+.++..+ +++.|+|+||+|++|.+++
T Consensus 195 ~~~--------------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~ 244 (272)
T 3h1q_A 195 DFS--------------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSE 244 (272)
T ss_dssp SST--------------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHH
T ss_pred hcC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHH
Confidence 865 5889999999999999999999998764 4789999999999999999
Q ss_pred HHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 993 MVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 993 ~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
++++.|+.++..+.+|++++|+|||++|
T Consensus 245 ~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 245 EFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 9999999999999999999999999875
No 47
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.87 E-value=2.1e-22 Score=194.21 Aligned_cols=122 Identities=70% Similarity=1.080 Sum_probs=111.6
Q ss_pred ccceEEEeeccceeEEEeeCCeeeEEEcCCCCCCcceEEEeEeccCCceeEEEEEEecCcccccCCcceeEEEecCCCCC
Q psy5911 387 VKDVLLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPA 466 (1242)
Q Consensus 387 ~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~ 466 (1242)
.+++.+.|++|++||+++.++.|.+||+||++||++++++|++..|||+.+.|.+|||++..+.+|..||+|.|.++||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEEEEecCCeeEEEEEEEcCCCcEEEEEEecCCCC
Q psy5911 467 PRGVPQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGL 508 (1242)
Q Consensus 467 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l 508 (1242)
|+|.++|+|+|++|.||+|+|+|.|+.||++.+++|..+.+|
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~l 135 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCCC
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCCC
Confidence 999999999999999999999999999999999999877554
No 48
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.87 E-value=5.2e-22 Score=191.45 Aligned_cols=122 Identities=70% Similarity=1.080 Sum_probs=111.4
Q ss_pred ccceEEeecccceeeEEEeCceEEEEecCCCCcccceEEEeeeccCCCceEEEEeecccccccccCcceeeEEecCCCCC
Q psy5911 1027 VKDVLLLDVTPLTLGIETMGGVMTPLIEKNTTIPTRKTQVFSTAEDNQTSVTIHTLQGERKKASQNKSLGKFDLNDISPA 1106 (1242)
Q Consensus 1027 ~~~~~~~~~~~~~~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~n~~lg~~~l~~~~~~ 1106 (1242)
.+++.+.|++|++||+++.++.|.++||||++||+++++.|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEEEEEcCCeeEEEEEEecCCCceEEEEEccCCCC
Q psy5911 1107 PRGVPQIEVSFDLDANGILNVTAKDKKTGKEQSIIIKSSGGL 1148 (1242)
Q Consensus 1107 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~l 1148 (1242)
|+|.++|+|+|++|.||+|+|+|.++.||++.+++|..+.+|
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~l 135 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCCC
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCCC
Confidence 999999999999999999999999999999999999876543
No 49
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.86 E-value=6.3e-22 Score=230.57 Aligned_cols=304 Identities=14% Similarity=0.136 Sum_probs=195.2
Q ss_pred cccccCCceEEEEEEEeCCcce-EEecCCCCcccceE-EEEecCCcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCChh
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQ-VIENSEGGRTTPSV-VGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDEI 722 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~-ii~~~~g~~~~PS~-v~~~~~~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~~ 722 (1242)
.+++|.||.++.+++...+.|. ++++--|....|+. +.+. ....++|++|.... .. ..++
T Consensus 7 ~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~-~~~~~vG~~a~~~~----~~--~~~~----------- 68 (375)
T 2fxu_A 7 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG-QKDSYVGDEAQSKR----GI--LTLK----------- 68 (375)
T ss_dssp CEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC--------CCEEHHHHHHHT----TS--EEEE-----------
T ss_pred eEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCC-CCCeEechhHhhcC----cc--ccee-----------
Confidence 5689999999999887655544 34333332222221 1111 12467888886541 00 0011
Q ss_pred HHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCC--CCcEEEEecCCCCHHHHHHHHHH-H
Q psy5911 723 VQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEK--IEKAVITVPAYFNDSQRQATKDA-G 799 (1242)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~~~~A-a 799 (1242)
+|+ ....+.--+....+++++.. +.++.. ...++||+|++++..+|+++.++ .
T Consensus 69 -------~Pi--------------~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~f 124 (375)
T 2fxu_A 69 -------YPI--------------EHGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 124 (375)
T ss_dssp -------CSE--------------ETTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred -------ccc--------------cCCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHH
Confidence 111 11112222344455555542 233332 34599999999999999988876 4
Q ss_pred HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHH
Q psy5911 800 KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIIN 879 (1242)
Q Consensus 800 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 879 (1242)
+.+|++.+.+++||+|||++|+.. ..+|+|+|+||||++.+. . + +.+....+...+||+++|+.|.+
T Consensus 125 e~~g~~~~~~~~e~~aaa~a~g~~------~~lVvDiG~gtt~v~~v~--~----G-~~~~~~~~~~~~GG~~lt~~l~~ 191 (375)
T 2fxu_A 125 ETFNVPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVTHNVPIY--E----G-YALPHAIMRLDLAGRDLTDYLMK 191 (375)
T ss_dssp HTTCCSEEEEEEHHHHHHHHTTCS------SEEEEEECSSCEEEEEEE--T----T-EECGGGCEEESCCHHHHHHHHHH
T ss_pred HhcCcceEEEccchheeeeecCCC------eEEEEEcCCCceEEeEeE--C----C-EEeccceEEeccCHHHHHHHHHH
Confidence 888999999999999999999863 468999999999998774 1 3 23333345577999999999999
Q ss_pred HHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhcc----------------CCceeeEEeccccccCCCCeeeEEEEcH
Q psy5911 880 HLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELS----------------NAEQTDINLPYITADKNGPKHLNVKITR 943 (1242)
Q Consensus 880 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls----------------~~~~~~i~i~~~~~~~~~~~~~~~~itr 943 (1242)
++..+. + .... .. -...+|++|+.++ ......+.+|. ...+++++
T Consensus 192 ~l~~~~---~--~~~~-~~----~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpd---------g~~i~i~~ 252 (375)
T 2fxu_A 192 ILTERG---Y--SFVT-TA----EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPD---------GQVITIGN 252 (375)
T ss_dssp HHHHHT---C--CCCS-HH----HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTT---------SCEEEEST
T ss_pred HHHhcC---C--CCCc-HH----HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCC---------CCEEEECh
Confidence 998751 1 1111 00 0223444444432 22233444441 13578898
Q ss_pred HHHH---HHHHHH-----HHHHHHHHHHHHHhcCC--CccCcceEEEecCcCchHHHHHHHHhhhc--------cccccc
Q psy5911 944 SKLE---SLVEDL-----ISKSLKPCEVALNDAKI--DKSKISEIILVGGQTRMPLVQKMVSEFFE--------KEVKKD 1005 (1242)
Q Consensus 944 ~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~ip~v~~~l~~~f~--------~~v~~~ 1005 (1242)
+.|+ .+++|. ...+.++|.+.|..+.. ....++.|+|+||+|++|.++++|++.++ .++..+
T Consensus 253 erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~ 332 (375)
T 2fxu_A 253 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332 (375)
T ss_dssp HHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECC
T ss_pred hheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcC
Confidence 8883 344543 24577888888886642 23346889999999999999999999885 344567
Q ss_pred CCcchhhhhhHHHhhhh
Q psy5911 1006 INPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 1006 ~~p~~aVa~GAa~~a~~ 1022 (1242)
.+|..+++.||+++|..
T Consensus 333 ~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 333 PERKYSVWIGGSILASL 349 (375)
T ss_dssp TTTTSHHHHHHHHHHHC
T ss_pred CCCCccEEcchHHhhCc
Confidence 89999999999999973
No 50
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.86 E-value=1.2e-21 Score=232.21 Aligned_cols=242 Identities=15% Similarity=0.135 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHhHhCCC--CCcEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHH-cc---CCCCCC
Q psy5911 755 QISAEILKKMKSTAETFLNEK--IEKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALA-YG---LDKKPD 827 (1242)
Q Consensus 755 ~v~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~-y~---~~~~~~ 827 (1242)
+....+++++.. ..++.. ...++||+|++|+..+|++|.+++ +.+|++.+.+++||+||+++ |. .... .
T Consensus 87 d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~-~ 162 (418)
T 1k8k_A 87 DLMERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER-T 162 (418)
T ss_dssp HHHHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC-C
T ss_pred HHHHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC-C
Confidence 334445555542 234322 357999999999999999999999 99999999999999999988 52 2212 2
Q ss_pred CcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHH
Q psy5911 828 DRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAA 907 (1242)
Q Consensus 828 ~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 907 (1242)
. +.+|+|+||||||++++.- + ..+....+...+||+++|+.|.++|..++. ..+... -...+
T Consensus 163 ~-~glVvDiG~gtt~v~~v~~------G-~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~ 224 (418)
T 1k8k_A 163 L-TGTVIDSGDGVTHVIPVAE------G-YVIGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETA 224 (418)
T ss_dssp C-CEEEEEESSSCEEEEEEET------T-EECGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHH
T ss_pred C-eEEEEEcCCCceEEEEeEC------C-EEcccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHH
Confidence 2 5699999999999999862 2 223333356789999999999999986542 111111 13466
Q ss_pred HHhhhhccCCc-----------------eeeEEeccccccCCCCeeeEEEEcHHHH---HHHHHHHH------HHHHHHH
Q psy5911 908 EKAKIELSNAE-----------------QTDINLPYITADKNGPKHLNVKITRSKL---ESLVEDLI------SKSLKPC 961 (1242)
Q Consensus 908 e~~K~~Ls~~~-----------------~~~i~i~~~~~~~~~~~~~~~~itr~~f---e~~~~~~~------~~~~~~i 961 (1242)
|++|+.++... ...+.+|. ...+....+++++++| |.++.|.+ ..+.++|
T Consensus 225 e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd----~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i 300 (418)
T 1k8k_A 225 KAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGIN----AISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV 300 (418)
T ss_dssp HHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEEC----TTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHH
T ss_pred HHHHHhhchhcccHHHHHHhhcccccccceeEECCC----CCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHH
Confidence 77777765321 12344432 2223456789999999 55555542 5688889
Q ss_pred HHHHHhcCC--CccCcceEEEecCcCchHHHHHHHHhhhccc------------------------ccccCCcchhhhhh
Q psy5911 962 EVALNDAKI--DKSKISEIILVGGQTRMPLVQKMVSEFFEKE------------------------VKKDINPDEAVAVG 1015 (1242)
Q Consensus 962 ~~~l~~~~~--~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~------------------------v~~~~~p~~aVa~G 1015 (1242)
.++|..+.. ....++.|+|+||+|++|.++++|++.++.. +..+.+|..++..|
T Consensus 301 ~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~G 380 (418)
T 1k8k_A 301 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFG 380 (418)
T ss_dssp HHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHH
T ss_pred HHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHh
Confidence 999987653 3445789999999999999999998776421 23345788999999
Q ss_pred HHHhhhh
Q psy5911 1016 ASVQAGV 1022 (1242)
Q Consensus 1016 Aa~~a~~ 1022 (1242)
|+++|..
T Consensus 381 gsilasl 387 (418)
T 1k8k_A 381 GSMLAST 387 (418)
T ss_dssp HHHHTTS
T ss_pred HHHHHcC
Confidence 9999974
No 51
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.84 E-value=1.7e-20 Score=219.42 Aligned_cols=197 Identities=15% Similarity=0.141 Sum_probs=153.5
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCch
Q psy5911 792 RQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGE 871 (1242)
Q Consensus 792 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~ 871 (1242)
.+.+.+|++.|||++..++.||.|||++|..... .+..++|+|+||||||+++++- +.+. ..++..+||+
T Consensus 170 v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-~~~gv~vvDiGggttdisi~~~------g~~~---~~~~i~~GG~ 239 (419)
T 4a2a_A 170 YEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-KDRGVVVVNLGYNFTGLIAYKN------GVPI---KISYVPVGMK 239 (419)
T ss_dssp HHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-HHHCEEEEEECSSSEEEEEEET------TEEE---EEEEESCCHH
T ss_pred HHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-ccCCEEEEEECCCcEEEEEEEC------CEEE---EEEecccHHH
Confidence 3578899999999999999999999999865432 3456889999999999999973 3232 2345779999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC-----ceeeEEeccccccCCCCeeeEEEEcHHHH
Q psy5911 872 DFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA-----EQTDINLPYITADKNGPKHLNVKITRSKL 946 (1242)
Q Consensus 872 ~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~i~i~~~~~~~~~~~~~~~~itr~~f 946 (1242)
+||+.|...+.- ....||++|+.++.. ....+.++... + .....++|++|
T Consensus 240 ~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~----~--~~~~~is~~~l 294 (419)
T 4a2a_A 240 HVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLD----G--NTIKTTTAKKL 294 (419)
T ss_dssp HHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT----S--CSEEEEEHHHH
T ss_pred HHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecC----C--ccceEEcHHHH
Confidence 999999876421 156899999998752 33455555432 1 24678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC------ccCcceEEEecCcCchHHHHHHHHhhhccccccc---------------
Q psy5911 947 ESLVEDLISKSLKPCEVALNDAKID------KSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKD--------------- 1005 (1242)
Q Consensus 947 e~~~~~~~~~~~~~i~~~l~~~~~~------~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~--------------- 1005 (1242)
.++++|.++++.+.+++.|+.++.+ ...++.|+|+||+|++|.+++++++.||.++...
T Consensus 295 ~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~ 374 (419)
T 4a2a_A 295 SVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADE 374 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccc
Confidence 9999999999999999999999873 4568999999999999999999999998765322
Q ss_pred --CCcchhhhhhHHHhhhhh
Q psy5911 1006 --INPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 1006 --~~p~~aVa~GAa~~a~~l 1023 (1242)
.+|..+.|.|.++++...
T Consensus 375 ~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 375 VANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp HHTCGGGHHHHHTTCC----
T ss_pred ccCCchHHHHHHHHHHHhhc
Confidence 388999999999988543
No 52
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.84 E-value=1e-21 Score=223.62 Aligned_cols=226 Identities=17% Similarity=0.171 Sum_probs=150.3
Q ss_pred eecChHHHHHHHHHHHHHHHHhHhcCCCCcEEEEecCC-CCHH--HH--HHHHH--------H----HHHcCCCeeeeec
Q psy5911 109 KKLAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAY-FNDS--QR--QATKD--------A----GKIAGLEVLRIIN 171 (1242)
Q Consensus 109 ~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~vitVPa~-f~~~--qr--~~~~~--------A----a~~AGl~~~~li~ 171 (1242)
..+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... || +++.+ + ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 356777666643 44443 211 1222 3699999987 6531 22 11211 1 2345567889999
Q ss_pred hHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCC
Q psy5911 172 EPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGV 251 (1242)
Q Consensus 172 Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~ 251 (1242)
||.||+++|.... ..+..++|+|+||||+|+++++ + +.+.+.+..++..+||.+||+.|.+++..+ +.
T Consensus 148 e~~aa~~~~~~~~-~~~~~~~vvDiGggttd~~v~~--~----g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~ 215 (320)
T 2zgy_A 148 ESIPAGYEVLQEL-DELDSLLIIDLGGTTLDISQVM--G----KLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RT 215 (320)
T ss_dssp SSHHHHHHHHHHS-CTTCEEEEEEECSSCEEEEEEE--G----GGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SB
T ss_pred CcHHHHHhhhccc-cCCCCEEEEEcCCCeEEEEEEe--C----CeeEEeeecCCccccHHHHHHHHHHHHHHc-----CC
Confidence 9999999986432 3467899999999999999997 2 445566667888899999999999988632 22
Q ss_pred CCCCCHHHHHHHHHHHHHH-hHHhc-CCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy5911 252 DLSGDSLAMQRLKEAAEKA-KIELS-NAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAK 329 (1242)
Q Consensus 252 ~~~~~~~~~~~L~~~~e~~-K~~Ls-~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~ 329 (1242)
++. ...+|++ |..-. ......+.++ -+.+++.+++++.++++.+.+.+.+++.
T Consensus 216 ~i~---------~~~ae~~lk~~~~~~~~~~~i~~~---------------~~~~~~~~~i~~~~~~~~~~i~~~i~~~- 270 (320)
T 2zgy_A 216 KGS---------SYLADDIIIHRKDNNYLKQRINDE---------------NKISIVTEAMNEALRKLEQRVLNTLNEF- 270 (320)
T ss_dssp GGG---------HHHHHHHHHTTTCHHHHHHHSSSS---------------CTHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCC---------HHHHHHHHHHhhhhhcccceecCc---------------hhhHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 221 1234444 33200 0000000000 1345666677777777777777666652
Q ss_pred CCcCCcceEEEecCccChHHHHHHHHHhccc---ccccCCCcchhhHhHHHHhh
Q psy5911 330 IDKSKISEIILVGGQTRMPLVQKMVSEFFEK---EVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 330 ~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~---~~~~~~~p~~ava~GAa~~a 380 (1242)
.+++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 271 ---~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 ---SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp ---CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred ---cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 468999999999998 99999999987 57889999999999999875
No 53
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.75 E-value=3.1e-19 Score=203.16 Aligned_cols=225 Identities=17% Similarity=0.175 Sum_probs=149.2
Q ss_pred eeChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCC-CCHH--HH--HHHHH--------H----HHHcCCceeeeech
Q psy5911 750 YCAPPQISAEILKKMKSTAETFLNEKIEKAVITVPAY-FNDS--QR--QATKD--------A----GKIAGLEVLRIINE 812 (1242)
Q Consensus 750 ~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~~~~--------A----a~~AGl~~~~li~E 812 (1242)
.+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... || +++.+ + ++.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 45666666543 44443 211 1222 3699999987 6541 22 21211 1 23445677899999
Q ss_pred hHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCC
Q psy5911 813 PTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVD 892 (1242)
Q Consensus 813 p~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~ 892 (1242)
|.||+++|.... ..+..++|+|+||||+|+++++ . +...+.+..++..+||.+||+.|.+++.++ +.+
T Consensus 149 ~~aa~~~~~~~~-~~~~~~~vvDiGggttd~~v~~--~----g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~ 216 (320)
T 2zgy_A 149 SIPAGYEVLQEL-DELDSLLIIDLGGTTLDISQVM--G----KLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTK 216 (320)
T ss_dssp SHHHHHHHHHHS-CTTCEEEEEEECSSCEEEEEEE--G----GGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBG
T ss_pred cHHHHHhhhccc-cCCCCEEEEEcCCCeEEEEEEe--C----CeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCC
Confidence 999999986432 2456899999999999999997 2 344566667788899999999999988642 222
Q ss_pred CCCCHHHHHHHHHHHHHh-hhhc-cCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy5911 893 LSGDSLAMQRLKEAAEKA-KIEL-SNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKI 970 (1242)
Q Consensus 893 ~~~~~~~~~~L~~~~e~~-K~~L-s~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~ 970 (1242)
+. ...+|++ |..- .......+.. .-+++++.+++++.++++.+.+.+.+++.
T Consensus 217 i~---------~~~ae~~lk~~~~~~~~~~~i~~---------------~~~~~~~~~~i~~~~~~~~~~i~~~i~~~-- 270 (320)
T 2zgy_A 217 GS---------SYLADDIIIHRKDNNYLKQRIND---------------ENKISIVTEAMNEALRKLEQRVLNTLNEF-- 270 (320)
T ss_dssp GG---------HHHHHHHHHTTTCHHHHHHHSSS---------------SCTHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CC---------HHHHHHHHHHhhhhhcccceecC---------------chhhHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 21 1234444 3320 0000000000 01345666677777777777777777652
Q ss_pred CccCcceEEEecCcCchHHHHHHHHhhhcc---cccccCCcchhhhhhHHHhh
Q psy5911 971 DKSKISEIILVGGQTRMPLVQKMVSEFFEK---EVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 971 ~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~---~v~~~~~p~~aVa~GAa~~a 1020 (1242)
.+++.|+|+||+|++ +++.+++.|+. ++....||++|+|+||++++
T Consensus 271 --~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 --SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp --CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred --cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 468999999999998 99999999987 57889999999999999875
No 54
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.74 E-value=5e-19 Score=207.03 Aligned_cols=213 Identities=19% Similarity=0.175 Sum_probs=91.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHHH-HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCc
Q psy5911 137 EKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGET 215 (1242)
Q Consensus 137 ~~~vitVPa~f~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~ 215 (1242)
..+++|+|+.++..+|+++.+++ +.+|++.+.+++||.|||++++. .+.+|+|+|+|||+++.+.- +
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------~~~lVVDiG~g~T~v~pv~~------G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------LTGVVVDSGDGVTHICPVYE------G 172 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEET------T
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------ceEEEEEcCCCceEeeeeEC------C
Confidence 45999999999999999998865 78899999999999999999875 34588899999999987742 2
Q ss_pred eEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc----------------e
Q psy5911 216 QFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE----------------Q 279 (1242)
Q Consensus 216 ~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------------~ 279 (1242)
.. +........+||+++|+.|.++|..+. +......+ ...+|++|+.++... .
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 11 211123357899999999999987541 11111112 235666777665321 1
Q ss_pred eeeeccccccCCCCCeeeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--cCCcceEEEecCccChHH
Q psy5911 280 TDINLPYITADKNGPKHLNVKITRSKLE---SLVEDL-----ISKSLKPCEVALNDAKID--KSKISEIILVGGQTRMPL 349 (1242)
Q Consensus 280 ~~i~i~~~~~~~~~~~~~~~~itr~~fe---~l~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~ip~ 349 (1242)
..+.+|. ...++|++++|+ -+++|. ...+.+.|.+.|..+..+ ..-.+.|+|+||+|++|.
T Consensus 242 ~~~~lpd---------g~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G 312 (394)
T 1k8k_B 242 ESYTLPD---------GRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPG 312 (394)
T ss_dssp EEEECTT---------SCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTT
T ss_pred eEEECCC---------CCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCccccccc
Confidence 1222221 125778888773 334442 235777888888877543 223678999999999999
Q ss_pred HHHHHHHhccc-----------------cc--ccCCCcchhhHhHHHHhhh
Q psy5911 350 VQKMVSEFFEK-----------------EV--KKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 350 v~~~l~~~f~~-----------------~~--~~~~~p~~ava~GAa~~a~ 381 (1242)
+.++|++.++. ++ ..+.+|..++.+|++++|.
T Consensus 313 ~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 313 LPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 99999887743 22 2356778999999999886
No 55
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.70 E-value=1.8e-17 Score=184.71 Aligned_cols=218 Identities=15% Similarity=0.151 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcEE-EEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCCCCCcEEE
Q psy5911 114 PQISAEILKKMKSTAETFLNEKIEKAV-ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIV 192 (1242)
Q Consensus 114 ~~v~a~~L~~l~~~a~~~~~~~~~~~v-itVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vl 192 (1242)
.++++.+|+.+++.+... ..++. +++..+ ...++......|+||+|+++++..... ....
T Consensus 36 ~e~a~~vl~~~~~~a~~~----~~~~~~~a~t~~------------~~~a~~~~~~~Vne~~aha~a~~~~~~---~~~~ 96 (276)
T 4ehu_A 36 TTGPSRVLEKLYGKTGLA----REDIKKVVVTGY------------GRMNYSDADKQISELSCHARGVNFIIP---ETRT 96 (276)
T ss_dssp SSHHHHHHHHHHHHHCCC----GGGEEEEEEEST------------TGGGCCSCSEECCHHHHHHHHHHHHST---TCCE
T ss_pred HHHHHHHHHHHHHHCCCc----chhccccccCch------------HHHHhhCCCcccchHHHHHHHHHHhCC---CCCe
Confidence 356667777777766332 22222 222221 124677888999999999998865433 2236
Q ss_pred EEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhH
Q psy5911 193 VYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKI 272 (1242)
Q Consensus 193 V~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 272 (1242)
|+|+|||+++++++. .+ +.++.....+....|+.+|+..+++++.-.+..... .+..++.
T Consensus 97 vl~lgG~~~~~~~~~-~~----g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~~---------------~~~~a~~ 156 (276)
T 4ehu_A 97 IIDIGGQDAKVLKLD-NN----GRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELGS---------------ISMNSQN 156 (276)
T ss_dssp EEEECSSCEEEEEEC-TT----SCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHHH---------------HHTTCSS
T ss_pred EEEEcCCCceEEEEE-ec----CceEEEEeCCCcCcchhhHHHHHHHHhccChhhhHH---------------HHhcCCC
Confidence 789999999999884 22 678888888889999999999999887543321100 0000000
Q ss_pred --HhcCCceeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHH
Q psy5911 273 --ELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLV 350 (1242)
Q Consensus 273 --~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v 350 (1242)
.+++....-...+.... .-.....++++..+.+.+.+.+....... ..++.|+|+||.+++|.|
T Consensus 157 ~~~i~~~~~~f~~s~~~~~----------~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~l 222 (276)
T 4ehu_A 157 EVSISSTCTVFAESEVISH----------LSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGI 222 (276)
T ss_dssp CCCCCCCSHHHHHHHHHHH----------HHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHH
T ss_pred CCCcCCccchhhhhHHHHh----------hhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHH
Confidence 00000000000000000 00001123455555555554444443332 357889999999999999
Q ss_pred HHHHHHhcccccccCCCcchhhHhHHHHhhhhhc
Q psy5911 351 QKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 351 ~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~ 384 (1242)
++.+++.||.++..+.+|++++|+|||++|....
T Consensus 223 r~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 223 VRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986543
No 56
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.64 E-value=7e-17 Score=188.82 Aligned_cols=214 Identities=19% Similarity=0.179 Sum_probs=90.7
Q ss_pred CcEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCc
Q psy5911 777 EKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGET 855 (1242)
Q Consensus 777 ~~~VitVPa~~~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~ 855 (1242)
..+++|+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++.. ..+|+|+|+|||+++.+.- +
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~------~~lVVDiG~g~T~v~pv~~------G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLL------TGVVVDSGDGVTHICPVYE------G 172 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEET------T
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCc------eEEEEEcCCCceEeeeeEC------C
Confidence 35999999999999999998854 888999999999999999998762 4588899999999988752 2
Q ss_pred eEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC----------------ce
Q psy5911 856 QFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA----------------EQ 919 (1242)
Q Consensus 856 ~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------------~~ 919 (1242)
. .+........+||+++|+.|.++|..+. +......+. ..+|++|+.+... ..
T Consensus 173 ~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 F-SLPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp E-ECSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred E-EcccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 1 1221223457899999999999987641 111111122 3445555554321 11
Q ss_pred eeEEeccccccCCCCeeeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHhcCCC--ccCcceEEEecCcCchHH
Q psy5911 920 TDINLPYITADKNGPKHLNVKITRSKLE---SLVEDL-----ISKSLKPCEVALNDAKID--KSKISEIILVGGQTRMPL 989 (1242)
Q Consensus 920 ~~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~ip~ 989 (1242)
..+.+|. ...+++++++|+ -+++|. ...+.+.|.+.|..+..+ ..-.+.|+|+||+|++|.
T Consensus 242 ~~~~lpd---------g~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G 312 (394)
T 1k8k_B 242 ESYTLPD---------GRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPG 312 (394)
T ss_dssp EEEECTT---------SCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTT
T ss_pred eEEECCC---------CCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCccccccc
Confidence 2233321 135778888773 334442 234777888888877543 223678999999999999
Q ss_pred HHHHHHhhhcc-----------------cc--cccCCcchhhhhhHHHhhhh
Q psy5911 990 VQKMVSEFFEK-----------------EV--KKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 990 v~~~l~~~f~~-----------------~v--~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+.++|++.++. ++ ..+.+|..++..|++++|..
T Consensus 313 ~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 313 LPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 99999887753 22 23567789999999998863
No 57
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.62 E-value=3.5e-15 Score=170.56 Aligned_cols=206 Identities=18% Similarity=0.258 Sum_probs=139.0
Q ss_pred CcEEEEecCCCCHHHH-HHHHHHHHHcCC------------CeeeeechHHHHHHHhccCCCC-----CCcEEEEEEeCC
Q psy5911 137 EKAVITVPAYFNDSQR-QATKDAGKIAGL------------EVLRIINEPTAAALAYGLDKKP-----DDRIIVVYDLGG 198 (1242)
Q Consensus 137 ~~~vitVPa~f~~~qr-~~~~~Aa~~AGl------------~~~~li~Ep~AAal~y~~~~~~-----~~~~vlV~D~Gg 198 (1242)
..+++.+|..+...+| +++++++...+- ..+.+++||.||+++++.+... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3789999999988887 589998875543 5678999999999999765421 367899999999
Q ss_pred cceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc
Q psy5911 199 GTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE 278 (1242)
Q Consensus 199 gT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~ 278 (1242)
||+|++++. + +.+ +...++...+||..+++.+.+++.+++. +..+. . ...++-+.
T Consensus 194 gTtd~~v~~--~----~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~------ 248 (355)
T 3js6_A 194 GTTIIDTYQ--N----MKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE------ 248 (355)
T ss_dssp SCEEEEEEE--T----TEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC------
T ss_pred CcEEEEEEc--C----CEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc------
Confidence 999999983 2 211 1112233467999999999999877642 11111 1 11111110
Q ss_pred eeeeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHH--HHHHHHH
Q psy5911 279 QTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPL--VQKMVSE 356 (1242)
Q Consensus 279 ~~~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~--v~~~l~~ 356 (1242)
+.....+ ..-.+.+ .+.+++.++++++++.+.+++.+.+ ...++.|+|+||++.++. |++.|++
T Consensus 249 -------~~~~~~~--~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~ 314 (355)
T 3js6_A 249 -------YKQCKLN--QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSD 314 (355)
T ss_dssp ----------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSS
T ss_pred -------ccccccc--ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHH
Confidence 0000000 0001122 3456777888888888888887764 356899999999999998 9999999
Q ss_pred hcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 357 FFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 357 ~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
.|+.. .||..|+|+|+..++..+.+
T Consensus 315 ~~~~~----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 315 VFEKA----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp CEECC----SSGGGHHHHHHHHHHHHHHH
T ss_pred HCCCC----CCcHHHHHHHHHHHHHHHHh
Confidence 88542 89999999999999877654
No 58
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1e-13 Score=163.08 Aligned_cols=179 Identities=18% Similarity=0.160 Sum_probs=124.8
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEeCCCCCcccceEEEEecC---CcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCC
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED---NRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTD 80 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~---~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 80 (1242)
..|+||+||.++.+++..++.|..+ +||+|+.... ...+||.++.... +.
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r~---------------- 76 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---RK---------------- 76 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---CT----------------
T ss_pred CeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---cC----------------
Confidence 3589999999999998766655433 5999988643 2466776532110 00
Q ss_pred hHHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcC--CCC-cEEEEecCCCCHHHHHHHHH
Q psy5911 81 EIVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNE--KIE-KAVITVPAYFNDSQRQATKD 157 (1242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~--~~~-~~vitVPa~f~~~qr~~~~~ 157 (1242)
.-.+...+.+..+.-.+....+++|+.... ++. .-. .+++|.|.......|++|.+
T Consensus 77 ------------------~l~l~~Pi~~GvI~dwd~~E~iw~~~f~~~---L~v~p~~~~pvlltep~~n~~~~Re~~~e 135 (498)
T 3qb0_A 77 ------------------DYELKPIIENGLVIDWDTAQEQWQWALQNE---LYLNSNSGIPALLTEPVWNSTENRKKSLE 135 (498)
T ss_dssp ------------------TEEEEESEETTEESCHHHHHHHHHHHHHHT---SCCSCCTTCCEEEEECTTCCHHHHHHHHH
T ss_pred ------------------ceEEeccCcCCEEccHHHHHHHHHHHHHhh---hCCCcccCCceEEEeCCCCcHHHHHHHHH
Confidence 001122234455666788888888876532 332 123 69999999999999999998
Q ss_pred HH-HHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHH
Q psy5911 158 AG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMR 236 (1242)
Q Consensus 158 Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~ 236 (1242)
.+ +.+|++.+.++.+|.||+++++.. +-||+|+|+|+++++.+.-+. .+.....-..+||+++|+.
T Consensus 136 ilFE~f~vpav~l~~~~vlalya~G~~------tglVVDiG~g~T~vvPI~~G~-------~l~~ai~rl~vgG~~lt~~ 202 (498)
T 3qb0_A 136 VLLEGMQFEACYLAPTSTCVSFAAGRP------NCLVVDIGHDTCSVSPIVDGM-------TLSKSTRRNFIAGKFINHL 202 (498)
T ss_dssp HHHTTSCCSEEEEEEHHHHHHHHHTCS------SEEEEEECSSCEEEEEEETTE-------ECGGGCEEESCSHHHHHHH
T ss_pred HHHhhcCCCeEeecchHHHHHHHcCCC------eEEEEEcCCCcEEEEEEeCCE-------EccccceeccccHHHHHHH
Confidence 65 789999999999999999999762 238889999999999985221 1111111235799999999
Q ss_pred HHHHHHH
Q psy5911 237 IINHLIY 243 (1242)
Q Consensus 237 l~~~l~~ 243 (1242)
|.++|..
T Consensus 203 L~~lL~~ 209 (498)
T 3qb0_A 203 IKKALEP 209 (498)
T ss_dssp HHHHTTT
T ss_pred HHHHHHh
Confidence 9999864
No 59
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.49 E-value=8.7e-14 Score=159.01 Aligned_cols=205 Identities=18% Similarity=0.254 Sum_probs=138.7
Q ss_pred cEEEEecCCCCHHHH-HHHHHHHHHcCC------------ceeeeechhHHHHHHccCCCCC-----CCcEEEEEeeCCC
Q psy5911 778 KAVITVPAYFNDSQR-QATKDAGKIAGL------------EVLRIINEPTAAALAYGLDKKP-----DDRIIVVYDLGGG 839 (1242)
Q Consensus 778 ~~VitVPa~~~~~qr-~~~~~Aa~~AGl------------~~~~li~Ep~AAal~y~~~~~~-----~~~~vlV~D~Ggg 839 (1242)
.+++.+|..+...+| +++++++...+- ..+.+++||.||+++++.+..+ .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 789999999988887 589998875543 4678999999999999765421 3678899999999
Q ss_pred ceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCce
Q psy5911 840 TFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ 919 (1242)
Q Consensus 840 T~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~ 919 (1242)
|||++++. + +.+ +...++...+||..+++.+.+++.+++. +..+. . ...++.+.
T Consensus 195 Ttd~~v~~--~----~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~------- 248 (355)
T 3js6_A 195 TTIIDTYQ--N----MKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE------- 248 (355)
T ss_dssp CEEEEEEE--T----TEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-------
T ss_pred cEEEEEEc--C----CEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-------
Confidence 99999993 2 211 1112334568999999999999887642 11111 1 11111111
Q ss_pred eeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHH--HHHHHHhh
Q psy5911 920 TDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPL--VQKMVSEF 997 (1242)
Q Consensus 920 ~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~--v~~~l~~~ 997 (1242)
+. ....+ ..-.+.+ .+.+++.++++++++.+.+++.+.+ ++.++.|+|+||+|.++. +.+.+++.
T Consensus 249 --~~----~~~~~--~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~ 315 (355)
T 3js6_A 249 --YK----QCKLN--QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDV 315 (355)
T ss_dssp ---------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSC
T ss_pred --cc----ccccc--ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHH
Confidence 00 00000 0001122 2456777888888888888887764 356899999999999998 88999998
Q ss_pred hcccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 998 FEKEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 998 f~~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
|+.. .||..|+|+|+..++..+.+
T Consensus 316 ~~~~----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 316 FEKA----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp EECC----SSGGGHHHHHHHHHHHHHHH
T ss_pred CCCC----CCcHHHHHHHHHHHHHHHHh
Confidence 8542 89999999999999877654
No 60
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.48 E-value=1.4e-14 Score=169.34 Aligned_cols=253 Identities=15% Similarity=0.083 Sum_probs=159.5
Q ss_pred cCeecChHHHHHHHHHHHHHHHHhHhcCC--CCcEEEEecCCCCHHHHHHHHHHH-HHcCCCeeeeechHHHHHHHhccC
Q psy5911 107 KDKKLAPPQISAEILKKMKSTAETFLNEK--IEKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLD 183 (1242)
Q Consensus 107 ~~~~~~~~~v~a~~L~~l~~~a~~~~~~~--~~~~vitVPa~f~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~ 183 (1242)
.+..+.-.+....+++++... .++.. -..+++|.|...+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+..
T Consensus 95 ~~GvI~dwd~~e~iw~~~~~~---~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~ 171 (427)
T 3dwl_A 95 RHGQIENWDHMERFWQQSLFK---YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTS 171 (427)
T ss_dssp ETTEECCHHHHHHHHHHHHHT---TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGS
T ss_pred ccCeeccHHHHHHHHHHHHhH---hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCc
Confidence 344556677777777776542 23322 347999999999999999999887 789999999999999999998854
Q ss_pred CC--CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHH
Q psy5911 184 KK--PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQ 261 (1242)
Q Consensus 184 ~~--~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~ 261 (1242)
.. ....+-||+|+|+|+++++.+.-.. .+........+||+++|+.|.++|..+... .
T Consensus 172 ~~~~~~~~tglVVDiG~g~T~v~PV~~G~-------~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~-------------~ 231 (427)
T 3dwl_A 172 SKVTDRSLTGTVVDSGDGVTHIIPVAEGY-------VIGSSIKTMPLAGRDVTYFVQSLLRDRNEP-------------D 231 (427)
T ss_dssp TTTCSCCCCEEEEEESSSCEEEEEEETTE-------ECGGGCEEESCCHHHHHHHHHHTTC-------------------
T ss_pred ccccCCCceEEEEECCCCceEEEEEECCE-------EehhhheeccccHHHHHHHHHHHHHHcCCC-------------c
Confidence 21 1134568889999999999984221 111111123679999999999988655431 0
Q ss_pred HHHHHHHHHhHHhcCCcee---ee--------eccccccCCCCCeeeEEEEcHHHHH---HHHHHH------HHHHHHHH
Q psy5911 262 RLKEAAEKAKIELSNAEQT---DI--------NLPYITADKNGPKHLNVKITRSKLE---SLVEDL------ISKSLKPC 321 (1242)
Q Consensus 262 ~L~~~~e~~K~~Ls~~~~~---~i--------~i~~~~~~~~~~~~~~~~itr~~fe---~l~~~~------~~~i~~~i 321 (1242)
.=...+|.+|+.++..... ++ .+.........+....+.|..++|. -+++|- ...+.+++
T Consensus 232 ~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i 311 (427)
T 3dwl_A 232 SSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELV 311 (427)
T ss_dssp --CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHH
T ss_pred hhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHH
Confidence 0134567777776543210 00 0000000000112235677777763 345552 23577788
Q ss_pred HHHHHHcCCCc--CCcceEEEecCccChHHHHHHHHHhcc----------------------cccccCCCcchhhHhHHH
Q psy5911 322 EVALNDAKIDK--SKISEIILVGGQTRMPLVQKMVSEFFE----------------------KEVKKDINPDEAVAVGAS 377 (1242)
Q Consensus 322 ~~~l~~~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~----------------------~~~~~~~~p~~ava~GAa 377 (1242)
.+.|..+..+. .-...|+|+||+|.+|.+.++|++.+. .++..+.++..++=.|++
T Consensus 312 ~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGS 391 (427)
T 3dwl_A 312 DNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGS 391 (427)
T ss_dssp HHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHH
T ss_pred HHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCce
Confidence 88887654321 114679999999999999999886541 123345577889999999
Q ss_pred Hhhhh
Q psy5911 378 VQAGV 382 (1242)
Q Consensus 378 ~~a~~ 382 (1242)
++|..
T Consensus 392 ilasl 396 (427)
T 3dwl_A 392 LLAQT 396 (427)
T ss_dssp HHHHS
T ss_pred eeccc
Confidence 99863
No 61
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.47 E-value=1.1e-14 Score=165.28 Aligned_cols=204 Identities=16% Similarity=0.172 Sum_probs=140.6
Q ss_pred CcEEEEecCCCCH--HHHHHHHHHHHHc--------C------CCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcc
Q psy5911 137 EKAVITVPAYFND--SQRQATKDAGKIA--------G------LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGT 200 (1242)
Q Consensus 137 ~~~vitVPa~f~~--~qr~~~~~Aa~~A--------G------l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT 200 (1242)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. ....+..++|+|+||||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~~~~~~v~vvDiGggT 183 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--ENFKNKNVAVIDFGGLN 183 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CCCTTCEEEEEEECSSC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hhhccCCEEEEEeCCCc
Confidence 4789999988774 3677777766521 1 134778999999887763 22356789999999999
Q ss_pred eeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCcee
Q psy5911 201 FDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQT 280 (1242)
Q Consensus 201 ~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~ 280 (1242)
+|++++.- +.+ +....+...+||.++++.+.+++.. .+++..+... .+|++|+. .. .
T Consensus 184 td~~v~~~------g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~~---------~~e~i~~~-g~---~ 240 (329)
T 4apw_A 184 MGFSLYRN------CVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITNE---------QAESALNN-GY---M 240 (329)
T ss_dssp EEEEEEET------TEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTSB---------TTTTCSSS-CS---S
T ss_pred EEEEEEEC------CEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCHH---------HHHHHHhc-CC---c
Confidence 99999972 222 2222344568999999999887765 0333333211 23344432 11 0
Q ss_pred eeeccccccCCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccc
Q psy5911 281 DINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK 360 (1242)
Q Consensus 281 ~i~i~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~ 360 (1242)
. ...+ . ..+..+.+++.+++.++++.+.+++. +.+++.++.|+|+||++.+ +.+.|++.|+.
T Consensus 241 ----~-~g~~------~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~ 302 (329)
T 4apw_A 241 ----K-KGGE------I-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPN 302 (329)
T ss_dssp ----C-EECT------T-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTT
T ss_pred ----c-cCCc------c-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCC
Confidence 0 0000 1 13456778888888888888777766 2445558999999999998 56999999997
Q ss_pred ccccCCCcchhhHhHHHHhhhhh
Q psy5911 361 EVKKDINPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 361 ~~~~~~~p~~ava~GAa~~a~~l 383 (1242)
++....||..|+|+|+..++...
T Consensus 303 ~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 303 NSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp CEECCSSGGGHHHHHHHHHHHHH
T ss_pred CCEecCCChhhHHHHHHHHHhhh
Confidence 78889999999999998877543
No 62
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.46 E-value=3.8e-14 Score=157.66 Aligned_cols=233 Identities=14% Similarity=0.119 Sum_probs=145.8
Q ss_pred CCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCCCCCcEE-EEecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHH
Q psy5911 739 NGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNEKIEKAV-ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAA 817 (1242)
Q Consensus 739 ~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~~~~~V-itVPa~~~~~qr~~~~~Aa~~AGl~~~~li~Ep~AAa 817 (1242)
++.+....-.....|.++++.+|+.+++.+.. ...+.. +++..+ . ..++......|+||+|++
T Consensus 21 ~~~il~~~~~~~g~~~e~a~~vl~~~~~~a~~----~~~~~~~~a~t~~-~-----------~~a~~~~~~~Vne~~aha 84 (276)
T 4ehu_A 21 GEDIVASETISSGTGTTGPSRVLEKLYGKTGL----AREDIKKVVVTGY-G-----------RMNYSDADKQISELSCHA 84 (276)
T ss_dssp TTEEEEEEEESCCTTSSHHHHHHHHHHHHHCC----CGGGEEEEEEEST-T-----------GGGCCSCSEECCHHHHHH
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHHCCC----cchhccccccCch-H-----------HHHhhCCCcccchHHHHH
Confidence 33343333223345677888899888887633 222332 222222 1 246777889999999999
Q ss_pred HHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCH
Q psy5911 818 LAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDS 897 (1242)
Q Consensus 818 l~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~ 897 (1242)
+++..... ....|+|+|||+++++++.. + +.++.....+....|+.+|+..+.+++.-.|.....
T Consensus 85 ~a~~~~~~---~~~~vl~lgG~~~~~~~~~~-~----g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~~------- 149 (276)
T 4ehu_A 85 RGVNFIIP---ETRTIIDIGGQDAKVLKLDN-N----GRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELGS------- 149 (276)
T ss_dssp HHHHHHST---TCCEEEEECSSCEEEEEECT-T----SCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHHH-------
T ss_pred HHHHHhCC---CCCeEEEEcCCCceEEEEEe-c----CceEEEEeCCCcCcchhhHHHHHHHHhccChhhhHH-------
Confidence 88765433 22367899999999998842 2 678888888888899999999999887544432110
Q ss_pred HHHHHHHHHHHHhhh--hccCCceeeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCc
Q psy5911 898 LAMQRLKEAAEKAKI--ELSNAEQTDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKI 975 (1242)
Q Consensus 898 ~~~~~L~~~~e~~K~--~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i 975 (1242)
.+..++. .+++....-...+.... .-.....++++..+...+.+.+....... ..+
T Consensus 150 --------~~~~a~~~~~i~~~~~~f~~s~~~~~----------~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~ 207 (276)
T 4ehu_A 150 --------ISMNSQNEVSISSTCTVFAESEVISH----------LSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQ 207 (276)
T ss_dssp --------HHTTCSSCCCCCCCSHHHHHHHHHHH----------HHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCC
T ss_pred --------HHhcCCCCCCcCCccchhhhhHHHHh----------hhccccHHHHHHHHHHHHHHHHHHHHHhc----ccC
Confidence 0001110 01100000000000000 00001124455555555555544444433 357
Q ss_pred ceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhc
Q psy5911 976 SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 976 ~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~ 1024 (1242)
+.|+|+||.+++|.|++.+++.||.++..+.+|++++|+|||++|....
T Consensus 208 ~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 208 RNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred CeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999996544
No 63
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=2.4e-11 Score=142.97 Aligned_cols=178 Identities=17% Similarity=0.163 Sum_probs=117.9
Q ss_pred cccccCCceEEEEEEEeCCcceEEecCCCCcccceEEEEecC---CcEEEcHHHHHHhhhCCcchhhHHHHhcCCCCCCh
Q psy5911 645 TFGKKKGTTNSCVAVLNNGKPQVIENSEGGRTTPSVVGYTED---NRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 721 (1242)
Q Consensus 645 ~~~id~Gt~~~~~~v~~~g~~~ii~~~~g~~~~PS~v~~~~~---~~~~~G~~A~~~~~~~p~~~~~~~krllg~~~~d~ 721 (1242)
.+.+|.|+.++.+.+...+.|.. .+||+|+.... ...+||.++.... +.+
T Consensus 25 ~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~---------------- 77 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---RKD---------------- 77 (498)
T ss_dssp CEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---CTT----------------
T ss_pred eEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---cCc----------------
Confidence 45789999888887765444433 36999988642 2456776532110 000
Q ss_pred hHHhhcccCceEEEEcCCCCeEEEEcCeeeChHHHHHHHHHHHHHHHHhHhCC--CCC-cEEEEecCCCCHHHHHHHHHH
Q psy5911 722 IVQKDIKMVPYKIVAADNGDAWVEVKDQYCAPPQISAEILKKMKSTAETFLNE--KIE-KAVITVPAYFNDSQRQATKDA 798 (1242)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~--~~~-~~VitVPa~~~~~qr~~~~~A 798 (1242)
+ .+...+....+.--+....+++|+... .++. .-. .+++|.|.......|+.|.++
T Consensus 78 ----------l--------~l~~Pi~~GvI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~ei 136 (498)
T 3qb0_A 78 ----------Y--------ELKPIIENGLVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEV 136 (498)
T ss_dssp ----------E--------EEEESEETTEESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHH
T ss_pred ----------e--------EEeccCcCCEEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHH
Confidence 0 011112233334445556666666543 2332 123 689999999999999999996
Q ss_pred H-HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHH
Q psy5911 799 G-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 877 (1242)
Q Consensus 799 a-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l 877 (1242)
+ +..|++.+.++.+|.||+++++... -||+|+|+|+|+++.+.-. +.+........+||+++|+.|
T Consensus 137 lFE~f~vpav~l~~~~vlalya~G~~t------glVVDiG~g~T~vvPI~~G-------~~l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 137 LLEGMQFEACYLAPTSTCVSFAAGRPN------CLVVDIGHDTCSVSPIVDG-------MTLSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp HHTTSCCSEEEEEEHHHHHHHHHTCSS------EEEEEECSSCEEEEEEETT-------EECGGGCEEESCSHHHHHHHH
T ss_pred HHhhcCCCeEeecchHHHHHHHcCCCe------EEEEEcCCCcEEEEEEeCC-------EEccccceeccccHHHHHHHH
Confidence 5 8899999999999999999998631 3888999999999998522 111111122468999999999
Q ss_pred HHHHHH
Q psy5911 878 INHLIY 883 (1242)
Q Consensus 878 ~~~l~~ 883 (1242)
.++|..
T Consensus 204 ~~lL~~ 209 (498)
T 3qb0_A 204 KKALEP 209 (498)
T ss_dssp HHHTTT
T ss_pred HHHHHh
Confidence 999864
No 64
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.26 E-value=1.9e-12 Score=151.30 Aligned_cols=247 Identities=15% Similarity=0.078 Sum_probs=152.6
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCC--CCcEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHccCCCC--CC
Q psy5911 753 PPQISAEILKKMKSTAETFLNEK--IEKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKK--PD 827 (1242)
Q Consensus 753 ~~~v~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~--~~ 827 (1242)
--+....+++|+.. ..++.. -..+++|.|...+...|+.|.+.+ +..|++.+.++.+|.+|+++.+.... ..
T Consensus 101 dwd~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~ 177 (427)
T 3dwl_A 101 NWDHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDR 177 (427)
T ss_dssp CHHHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSC
T ss_pred cHHHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCC
Confidence 33455556655543 233332 246999999999999999999987 78999999999999999999885421 11
Q ss_pred CcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHH
Q psy5911 828 DRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAA 907 (1242)
Q Consensus 828 ~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 907 (1242)
..+-||+|+|+|+|+++.+.-. +.+........+||+++|+.|.++|..+..... =...+
T Consensus 178 ~~tglVVDiG~g~T~v~PV~~G-------~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~~-------------~~~~~ 237 (427)
T 3dwl_A 178 SLTGTVVDSGDGVTHIIPVAEG-------YVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDS-------------SLKTA 237 (427)
T ss_dssp CCCEEEEEESSSCEEEEEEETT-------EECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHH
T ss_pred CceEEEEECCCCceEEEEEECC-------EEehhhheeccccHHHHHHHHHHHHHHcCCCch-------------hHHHH
Confidence 2346888999999999998422 111111122468999999999998876543200 02345
Q ss_pred HHhhhhccCCcee-----------eEEeccccccCCCCeeeEEEEcHHHHH---HHHHHH------HHHHHHHHHHHHHh
Q psy5911 908 EKAKIELSNAEQT-----------DINLPYITADKNGPKHLNVKITRSKLE---SLVEDL------ISKSLKPCEVALND 967 (1242)
Q Consensus 908 e~~K~~Ls~~~~~-----------~i~i~~~~~~~~~~~~~~~~itr~~fe---~~~~~~------~~~~~~~i~~~l~~ 967 (1242)
+.+|+.+..-... ...+.........+....+++..++|. -+++|- ...+.+++.+.|.+
T Consensus 238 ~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~ 317 (427)
T 3dwl_A 238 ERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQS 317 (427)
T ss_dssp HHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHT
T ss_pred HHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHh
Confidence 6666665432100 000000000000112235667777763 344552 24577888888886
Q ss_pred cCCCc--cCcceEEEecCcCchHHHHHHHHhhhc----------------------ccccccCCcchhhhhhHHHhhhh
Q psy5911 968 AKIDK--SKISEIILVGGQTRMPLVQKMVSEFFE----------------------KEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 968 ~~~~~--~~i~~ViLvGG~s~ip~v~~~l~~~f~----------------------~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+..+. .-...|+|+||+|.+|.+.++|++.+. .++..+.++..++=.|++++|..
T Consensus 318 c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl 396 (427)
T 3dwl_A 318 SPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQT 396 (427)
T ss_dssp SCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHS
T ss_pred CCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccc
Confidence 65321 114679999999999999999886551 12334567788999999999864
No 65
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.24 E-value=4.7e-12 Score=143.64 Aligned_cols=202 Identities=16% Similarity=0.166 Sum_probs=140.2
Q ss_pred CcEEEEecCCCCH--HHHHHHHHHHHHc--------C------CceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCc
Q psy5911 777 EKAVITVPAYFND--SQRQATKDAGKIA--------G------LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGT 840 (1242)
Q Consensus 777 ~~~VitVPa~~~~--~qr~~~~~Aa~~A--------G------l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT 840 (1242)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. ....+..++|+|+||||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~~~~~~v~vvDiGggT 183 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--ENFKNKNVAVIDFGGLN 183 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CCCTTCEEEEEEECSSC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hhhccCCEEEEEeCCCc
Confidence 3789999998774 3677787766521 2 134678999998887763 22356788999999999
Q ss_pred eEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHH-HhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCce
Q psy5911 841 FDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIY-EFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQ 919 (1242)
Q Consensus 841 ~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~-~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~ 919 (1242)
||++++.- +.+ +...++...+||.++++.+.+++.. ++ +..+.. ..+|++|+. ..
T Consensus 184 td~~v~~~------g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~----g~~i~~---------~~~e~i~~~-g~--- 239 (329)
T 4apw_A 184 MGFSLYRN------CVV-NPSERFIEEHGVKDLIIRVGDALTDLNN----GNLITN---------EQAESALNN-GY--- 239 (329)
T ss_dssp EEEEEEET------TEE-CGGGCEEESCCHHHHHHHHHTSSSSCSS----CSCTTS---------BTTTTCSSS-CS---
T ss_pred EEEEEEEC------CEE-eeccccchhhHHHHHHHHHHHHHHhhcc----CCCCCH---------HHHHHHHhc-CC---
Confidence 99999983 222 2223345668999999999887765 33 332221 133444432 11
Q ss_pred eeEEeccccccCCCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc
Q psy5911 920 TDINLPYITADKNGPKHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE 999 (1242)
Q Consensus 920 ~~i~i~~~~~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~ 999 (1242)
.. .+.+ . ..+..+.+++.+++.++.+.+.+++. . .+++.++.|+|+||+|.+ +.+.+++.|+
T Consensus 240 ~~-------~g~~----~-~~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~~ 301 (329)
T 4apw_A 240 MK-------KGGE----I-DTESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTYP 301 (329)
T ss_dssp SC-------EECT----T-CCSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHST
T ss_pred cc-------cCCc----c-hhHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHcC
Confidence 00 0000 0 13456788888888888888877766 2 344558999999999998 5699999999
Q ss_pred ccccccCCcchhhhhhHHHhhhh
Q psy5911 1000 KEVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 1000 ~~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
.++....||..|+|+|+..++..
T Consensus 302 ~~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 302 NNSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp TCEECCSSGGGHHHHHHHHHHHH
T ss_pred CCCEecCCChhhHHHHHHHHHhh
Confidence 77888999999999999887754
No 66
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.15 E-value=1.1e-09 Score=135.87 Aligned_cols=109 Identities=16% Similarity=0.230 Sum_probs=80.3
Q ss_pred HHHHHHH-hHhcCCCC-----cEEEEecCCCCHHHHHHHHHH-HHHcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEE
Q psy5911 123 KMKSTAE-TFLNEKIE-----KAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYD 195 (1242)
Q Consensus 123 ~l~~~a~-~~~~~~~~-----~~vitVPa~f~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D 195 (1242)
.|++++- ..++.... .+++|.|..++...|+.|.+. .+..|++.+.++.++.+|++++|.. +-||+|
T Consensus 179 ~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~------tglVVD 252 (593)
T 4fo0_A 179 VIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS------STCIVD 252 (593)
T ss_dssp HHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS------EEEEEE
T ss_pred HHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC------ceEEEE
Confidence 3444432 35654433 499999999999999998775 5677999999999999999999753 458889
Q ss_pred eCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHH
Q psy5911 196 LGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 244 (1242)
Q Consensus 196 ~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~ 244 (1242)
+|.++|.|+-|.=+-.-.....+ ..+||.++++.|.++|..+
T Consensus 253 iG~~~T~v~PV~dG~~l~~~~~r-------l~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 253 VGDQKTSVCCVEDGVSHRNTRLC-------LAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp ECSSCEEEEEEESSCBCGGGCEE-------ESCCHHHHHHHHHHHHHHT
T ss_pred eCCCceeeeeeECCEEehhheEE-------ecccHHHHHHHHHHHHHhc
Confidence 99999999987522111112222 3579999999999888654
No 67
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.02 E-value=8.9e-11 Score=133.34 Aligned_cols=198 Identities=21% Similarity=0.207 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHc-CC--CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCC
Q psy5911 150 SQRQATKDAGKIA-GL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDT 226 (1242)
Q Consensus 150 ~qr~~~~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~ 226 (1242)
.+-+.+.+|.+.+ |+ ++-. .||.||+++...+.. .+..++++|+||||||+|++.-.. ...... .
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~-----lv~a~~----i 435 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKG-----DIIATH----L 435 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTC-----CEEEEE----E
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEE----e
Confidence 4477889999999 99 6666 999999999866544 566678889999999999985322 222222 2
Q ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc----------eeeeec--cccccCCCCC
Q psy5911 227 FLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE----------QTDINL--PYITADKNGP 294 (1242)
Q Consensus 227 ~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------~~~i~i--~~~~~~~~~~ 294 (1242)
..||++++..|..-|.-. + +..||++|+ ..... ...+.+ +.+....-.
T Consensus 436 p~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~- 495 (610)
T 2d0o_A 436 AGAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA- 495 (610)
T ss_dssp ECSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT-
T ss_pred ccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee-
Confidence 359999998887655311 0 347899998 53221 112333 222211000
Q ss_pred e------eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCcceEEEecCccChHHHHHHHHHhcc
Q psy5911 295 K------HLNVKITRSK--LESLVEDLISKSLKP--CEVALNDAKI-----DKSKISEIILVGGQTRMPLVQKMVSEFFE 359 (1242)
Q Consensus 295 ~------~~~~~itr~~--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~ip~v~~~l~~~f~ 359 (1242)
. ..-..| +.+ +|+ ++-+-+++.+. +...|+..+. +..+|..|+|+||+|.++.+.++.++.|+
T Consensus 496 Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~ 573 (610)
T 2d0o_A 496 RVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALA 573 (610)
T ss_dssp CEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTT
T ss_pred eeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 1 112355 566 666 55555554443 3333554332 34567999999999999999999999997
Q ss_pred c-ccc-------cCCCcchhhHhHHHHhhh
Q psy5911 360 K-EVK-------KDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 360 ~-~~~-------~~~~p~~ava~GAa~~a~ 381 (1242)
. +++ ....|..|+|.|.+++.+
T Consensus 574 ~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 574 HYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp TSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred cCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 6 432 245899999999988754
No 68
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.00 E-value=2.8e-10 Score=129.95 Aligned_cols=196 Identities=19% Similarity=0.167 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHc-CC--CeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCC
Q psy5911 151 QRQATKDAGKIA-GL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTF 227 (1242)
Q Consensus 151 qr~~~~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~ 227 (1242)
+-+.+.+|.+.+ |+ ++-. .||.||+++...+.. .+..++++|+||||||+|++.-.. ...... ..
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~-----lv~a~~----ip 438 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEG-----QITAVH----LA 438 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSS-----CEEEEE----EE
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEE----ec
Confidence 356788899999 99 6666 999999999866544 566678889999999999996332 222222 23
Q ss_pred cchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCc----------eeeeec--cccccCCCCCe
Q psy5911 228 LGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAE----------QTDINL--PYITADKNGPK 295 (1242)
Q Consensus 228 lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------~~~i~i--~~~~~~~~~~~ 295 (1242)
.||++++..|..-|.-. + +..||++|+ ..... ...+.+ +.+....-. .
T Consensus 439 ~gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~-R 498 (607)
T 1nbw_A 439 GAGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFA-K 498 (607)
T ss_dssp CCHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT-C
T ss_pred cchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee-e
Confidence 59999998887655311 0 347899998 53221 112333 222211000 1
Q ss_pred ------eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCcceEEEecCccChHHHHHHHHHhccc
Q psy5911 296 ------HLNVKITRSK--LESLVEDLISKSLKP--CEVALNDAKID-----KSKISEIILVGGQTRMPLVQKMVSEFFEK 360 (1242)
Q Consensus 296 ------~~~~~itr~~--fe~l~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~ip~v~~~l~~~f~~ 360 (1242)
..-..| +.+ +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.++.+.++.++.|+.
T Consensus 499 ~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~ 576 (607)
T 1nbw_A 499 VVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSH 576 (607)
T ss_dssp EEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 112355 566 666 55555554443 45557776653 34579999999999999999999999966
Q ss_pred -ccc-------cCCCcchhhHhHHHHhh
Q psy5911 361 -EVK-------KDINPDEAVAVGASVQA 380 (1242)
Q Consensus 361 -~~~-------~~~~p~~ava~GAa~~a 380 (1242)
+++ ....|..|+|.|.+++.
T Consensus 577 ~~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 577 YGVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp TTCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred CCeEEecCCccccCCchHHHHHHHHHhh
Confidence 432 24589999999998864
No 69
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.88 E-value=6.3e-10 Score=126.48 Aligned_cols=196 Identities=21% Similarity=0.211 Sum_probs=124.8
Q ss_pred HHHHHHHHHHc-CC--ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCC
Q psy5911 792 RQATKDAGKIA-GL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFL 868 (1242)
Q Consensus 792 r~~~~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~l 868 (1242)
-+.+.+|.+.+ |+ ++-. .||.||+++.......+ --++++||||||||+|++.-.. . ..... ...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~e-LGvaiIDmGGGTTd~sVf~~G~----l-v~a~~----ip~ 437 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGTT-RPLAILDLGAGSTDASIINPKG----D-IIATH----LAG 437 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTCC-SSEEEEEECSSEEEEEEECTTC----C-EEEEE----EEC
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCc-CCeEEEEeCCCcceEEEEcCCc----E-EEEEE----ecc
Confidence 46677888888 99 5555 99999999998776533 3456669999999999996432 1 11111 235
Q ss_pred CchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC----------ceeeEEe--ccccccCCCCe-
Q psy5911 869 GGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA----------EQTDINL--PYITADKNGPK- 935 (1242)
Q Consensus 869 GG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~~~~~~~~~~- 935 (1242)
||++++..|..-|.-. + +..||+.|+ .... +.-.+.+ +.+....-. .
T Consensus 438 gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~-Rv 497 (610)
T 2d0o_A 438 AGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA-RV 497 (610)
T ss_dssp SHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT-CE
T ss_pred chHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee-ee
Confidence 9999998887654211 0 347888888 4221 1112333 322211100 1
Q ss_pred -----eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHhcCC-----CccCcceEEEecCcCchHHHHHHHHhhhcc-
Q psy5911 936 -----HLNVKITRSK--LESLVEDLISKSLKP--CEVALNDAKI-----DKSKISEIILVGGQTRMPLVQKMVSEFFEK- 1000 (1242)
Q Consensus 936 -----~~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~- 1000 (1242)
..-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++.++.|+.
T Consensus 498 ~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y 575 (610)
T 2d0o_A 498 CVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY 575 (610)
T ss_dssp EEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 112355 566 666 55444444443 2333444332 245679999999999999999999999976
Q ss_pred ccc-------ccCCcchhhhhhHHHhhh
Q psy5911 1001 EVK-------KDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 1001 ~v~-------~~~~p~~aVa~GAa~~a~ 1021 (1242)
++. ..-.|..|+|.|.+++.+
T Consensus 576 ~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 576 RLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp SCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 432 245899999999988754
No 70
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.87 E-value=9.2e-10 Score=125.75 Aligned_cols=194 Identities=19% Similarity=0.167 Sum_probs=123.9
Q ss_pred HHHHHHHHHc-CC--ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCC
Q psy5911 793 QATKDAGKIA-GL--EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG 869 (1242)
Q Consensus 793 ~~~~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lG 869 (1242)
+.+.+|.+.+ |+ ++-. .||.||+++...+...+ --++++||||||||+|++.-.. . ..... ...|
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~e-lGvaiIDmGgGTTd~sVf~~g~----l-v~a~~----ip~g 440 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPGCA-APLAILDLGAGSTDAAIVNAEG----Q-ITAVH----LAGA 440 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTCC-SSEEEEEECSSEEEEEEECSSS----C-EEEEE----EECC
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCc-CCeEEEEeCCCcceEEEEcCCc----E-EEEEE----eccc
Confidence 4566777777 88 5545 99999999998776533 3456669999999999997443 1 11111 2359
Q ss_pred chHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC----------ceeeEEe--ccccccCCCCe--
Q psy5911 870 GEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA----------EQTDINL--PYITADKNGPK-- 935 (1242)
Q Consensus 870 G~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~~~~~~~~~~-- 935 (1242)
|++++..|..-|.-. + +..||+.|+ .... +.-.+.+ +.+....-. .
T Consensus 441 G~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~-R~~ 500 (607)
T 1nbw_A 441 GNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFA-KVV 500 (607)
T ss_dssp HHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT-CEE
T ss_pred hHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee-eee
Confidence 999998887654211 0 347888888 4221 1112333 322211100 1
Q ss_pred ----eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHhcCCC-----ccCcceEEEecCcCchHHHHHHHHhhhcc-c
Q psy5911 936 ----HLNVKITRSK--LESLVEDLISKSLKP--CEVALNDAKID-----KSKISEIILVGGQTRMPLVQKMVSEFFEK-E 1001 (1242)
Q Consensus 936 ----~~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~ 1001 (1242)
..-..| +.+ +|+ ++-+-+++.+. +..+|+..+.. ..+|..|+|+||+|.++.+.++.++.|+. +
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 112345 555 666 55444444443 45557766543 34569999999999999999999999976 4
Q ss_pred cc-------ccCCcchhhhhhHHHhh
Q psy5911 1002 VK-------KDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 1002 v~-------~~~~p~~aVa~GAa~~a 1020 (1242)
+. ..-.|..|+|.|.+++.
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhh
Confidence 32 24589999999998764
No 71
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.87 E-value=4.7e-08 Score=121.06 Aligned_cols=111 Identities=15% Similarity=0.203 Sum_probs=83.0
Q ss_pred HHHHHHHHH-hHhCCCCC-----cEEEEecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHccCCCCCCCcEEEE
Q psy5911 761 LKKMKSTAE-TFLNEKIE-----KAVITVPAYFNDSQRQATKDA-GKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVV 833 (1242)
Q Consensus 761 L~~l~~~a~-~~~~~~~~-----~~VitVPa~~~~~qr~~~~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV 833 (1242)
+..|.+++- ..++.... .+++|.|..++...|+.|.+. .+..|++.+.++.++.+|++++|.. +-+|
T Consensus 177 ~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~------tglV 250 (593)
T 4fo0_A 177 IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS------STCI 250 (593)
T ss_dssp HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS------EEEE
T ss_pred HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC------ceEE
Confidence 344555543 45664433 399999999999999998775 5778999999999999999999764 4588
Q ss_pred EeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHHHHHHHHH
Q psy5911 834 YDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYE 884 (1242)
Q Consensus 834 ~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 884 (1242)
+|+|.++|.|+-+.=.-. +..+.-...+||.++++.|.++|..+
T Consensus 251 VDiG~~~T~v~PV~dG~~-------l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 251 VDVGDQKTSVCCVEDGVS-------HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp EEECSSCEEEEEEESSCB-------CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred EEeCCCceeeeeeECCEE-------ehhheEEecccHHHHHHHHHHHHHhc
Confidence 899999999998863211 11111223579999999999988754
No 72
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=98.78 E-value=1.6e-08 Score=94.54 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=68.3
Q ss_pred hhHHHHHhhhhHHHHHHHHHHhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1169 KFEELVKCKNEADSTISIVKKNLKD--ENTKITDEEKESIEKSISNLELLIKGD---DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1169 ~~~~~~~~~n~le~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
+.|++.++||.||+|+|.+++.|.+ +..++++++++.|..+|+++.+||+.+ +.++|+.++++|+..+.||+.|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999976 788999999999999999999999986 4899999999999999999864
No 73
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.55 E-value=5.8e-08 Score=91.56 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=66.7
Q ss_pred hHHHHHhhhhHHHHHHHHHHhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1170 FEELVKCKNEADSTISIVKKNLKD--ENTKITDEEKESIEKSISNLELLIKGD---DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1170 ~~~~~~~~n~le~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
.|++.++||.||+|||.+++.|.+ +...++++++++|..+|+++++||+++ +.++|+.++++|+..+.+|+.|
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k 90 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISK 90 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999976 778899999999999999999999965 7899999999999999999753
No 74
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.48 E-value=9e-06 Score=89.00 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhh
Q psy5911 309 LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 309 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l 383 (1242)
++..+++.+...+.+.++..+. .+.|+++||.++.|.+++.+++.++.++..+.+|..+.|+|||++|...
T Consensus 187 i~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 187 IIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 3344444444444444443221 3679999999999999999999999999888888889999999998754
No 75
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.39 E-value=3e-07 Score=85.96 Aligned_cols=70 Identities=20% Similarity=0.265 Sum_probs=62.7
Q ss_pred HHHhhhhHHHHHHHHHHhhh--hccCCCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHhhC
Q psy5911 1173 LVKCKNEADSTISIVKKNLK--DENTKITDEEKESIEKSISNLELLIKGD---DIELIKKGNEDLLKISENIIKK 1242 (1242)
Q Consensus 1173 ~~~~~n~le~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~~ 1242 (1242)
+.++||.||+|||.+++.|. .+...+++++|++|..+|+++++||+++ +.++|+.++++|+..+.+|+.|
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~ 76 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITK 76 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999997 6788999999999999999999999855 6789999999999999999753
No 76
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.91 E-value=3.3e-05 Score=91.53 Aligned_cols=175 Identities=16% Similarity=0.166 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCC-----CcEEEEecCCCCHHHHHHHHHHH-HHcCCCeeeeechHHHHHHHhccCCCCC
Q psy5911 114 PQISAEILKKMKSTAETFLNEKI-----EKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPD 187 (1242)
Q Consensus 114 ~~v~a~~L~~l~~~a~~~~~~~~-----~~~vitVPa~f~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~ 187 (1242)
.+....++.|+... ..++... ..+++|.|..++...|+.|.+.+ +..|++.+.++.+|.||+++++.
T Consensus 196 WD~mE~Iw~y~f~~--~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl----- 268 (655)
T 4am6_A 196 ISDVTKLLEHALNS--ETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI----- 268 (655)
T ss_dssp HHHHHHHHHHHHBS--SSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----
T ss_pred HHHHHHHHHHHhcc--ccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----
Confidence 34555555555431 1344332 46999999999999999998887 56899999999999999999874
Q ss_pred CcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q psy5911 188 DRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAA 267 (1242)
Q Consensus 188 ~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 267 (1242)
..+-||+|+|+|+++++.+.-+. .+.....-..+||+++|..|.++|..+--.....++ ... .=...+
T Consensus 269 ~ttGLVVDiG~g~T~VvPV~eG~-------vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f--~t~---~e~eiV 336 (655)
T 4am6_A 269 STSTCVVNIGAAETRIACVDEGT-------VLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKI--DSK---HGWLLA 336 (655)
T ss_dssp SSCEEEEEECSSCEEEEEEETTE-------ECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCT--TSH---HHHHHH
T ss_pred CCceEEEcCCCceEEEEEEeCCE-------EEhhheeeecchHHHHHHHHHHHHHHcCCCccccCC--CCc---chHHHH
Confidence 23458889999999999984221 111111124689999999999998764210000111 111 124568
Q ss_pred HHHhHHhcCCceeeeecc--ccc--cCCCCCeeeEEEEcHHHHH
Q psy5911 268 EKAKIELSNAEQTDINLP--YIT--ADKNGPKHLNVKITRSKLE 307 (1242)
Q Consensus 268 e~~K~~Ls~~~~~~i~i~--~~~--~~~~~~~~~~~~itr~~fe 307 (1242)
+.+|+.++......+.+. .+. ........+.+.+--+.|.
T Consensus 337 rdIKEk~CyVs~~Di~~q~~~f~~r~P~~~~~ky~i~vgdErfl 380 (655)
T 4am6_A 337 ERLKKNFTTFQDADVAVQLYNFMNRSPNQPTEKYEFKLFDEVML 380 (655)
T ss_dssp HHHHHHHCCCCGGGCCSEEEEEEECCSSSCEEEEEEEESSHHHH
T ss_pred HHHHHheEEEcccchhhhhhcceeccCCCCCcceEEEECCeehh
Confidence 899999887643333211 110 0111124566777777765
No 77
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.85 E-value=5.2e-05 Score=89.92 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=87.8
Q ss_pred CcEEEEecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCc
Q psy5911 777 EKAVITVPAYFNDSQRQATKDAG-KIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGET 855 (1242)
Q Consensus 777 ~~~VitVPa~~~~~qr~~~~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~ 855 (1242)
..+++|.|..++...|+.|.+.+ +..|++.+.++.+|.||++++|. ...-+|+|+|+|+|+++.+.-.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----~ttGLVVDiG~g~T~VvPV~eG------ 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----STSTCVVNIGAAETRIACVDEG------ 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----SSCEEEEEECSSCEEEEEEETT------
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----CCceEEEcCCCceEEEEEEeCC------
Confidence 36999999999999999998877 57899999999999999999875 1235888999999999998521
Q ss_pred eEEEEEecCCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCC
Q psy5911 856 QFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNA 917 (1242)
Q Consensus 856 ~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~ 917 (1242)
+.+........+||++++..|.++|..+--.....++. ... =...++.+|+.++.-
T Consensus 291 -~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~--t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 291 -TVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKID--SKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp -EECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTT--SHH---HHHHHHHHHHHHCCC
T ss_pred -EEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCC--Ccc---hHHHHHHHHHheEEE
Confidence 11111112246899999999999987652100001111 111 134677788887654
No 78
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.80 E-value=0.00017 Score=78.79 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhh
Q psy5911 948 SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 948 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l 1023 (1242)
+++..+++.+...+.+.+...+. .+.|+++||.++.|.+++.+.+.++.++..+.+|+.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 33444444444444444543321 3679999999999999999999999999888888889999999998653
No 79
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=97.03 E-value=0.0077 Score=72.11 Aligned_cols=207 Identities=15% Similarity=0.153 Sum_probs=110.9
Q ss_pred HHHHHHcCC----ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCce-EEEE------EecC
Q psy5911 796 KDAGKIAGL----EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQ-FEVL------STNG 864 (1242)
Q Consensus 796 ~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~-~~v~------~~~~ 864 (1242)
.++++..|| +++....+..||+++.+.... + .+++-+|.+++-..+..-...++.+. +... ...+
T Consensus 219 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~---g-~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 294 (504)
T 3ll3_A 219 TEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDS---D-HCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGG 294 (504)
T ss_dssp HHHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCST---T-EEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEE
T ss_pred HHHHHhcCCCcCCCEEEEccHHHHHHHhCCCCCC---C-cEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEEe
Confidence 355666655 567777888888888865432 2 23445676665444332111111111 1110 0112
Q ss_pred CCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEecccccc--------CCC-Ce
Q psy5911 865 DTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITAD--------KNG-PK 935 (1242)
Q Consensus 865 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~--------~~~-~~ 935 (1242)
....||. .++|+.+.|.... .. ...+...++++.. .....+.+|++... ..+ ..
T Consensus 295 ~~~~~G~-----~~~W~~~~~~~~~-----~~---~~~~~~~a~~~~~----g~~gl~~~P~~~Ger~P~~d~~arg~~~ 357 (504)
T 3ll3_A 295 PVNNGGI-----VFNWARQTLFDAD-----ET---PQDFLDVAQTAPA----GSRNLIFLPYLGGERAPIWDANARGSFV 357 (504)
T ss_dssp EESCSHH-----HHHHHHHHHTCTT-----CC---HHHHHHHHHTSCT----TGGGCEEECCTTCBCTTTCBTTCCEEEE
T ss_pred ehhhHHH-----HHHHHHHHhccch-----hH---HHHHHHHHhcCCC----CCCCeEEecCccCCCCCCCCCccCeEEE
Confidence 2344665 4467777764211 11 1222222222211 12233455554311 111 01
Q ss_pred eeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhh
Q psy5911 936 HLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVG 1015 (1242)
Q Consensus 936 ~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~G 1015 (1242)
.++..-++.++-..+-+-+.-....+-+.|++.+. .++.|.++||+++++.+.+++.+.||.++..+ .+.|+.|+|
T Consensus 358 Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alG 433 (504)
T 3ll3_A 358 GLTRMHQKPEMARAVIEGIIFNLYDAASNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLA 433 (504)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHH
Confidence 12223356666554333333223333344454442 58899999999999999999999999998764 466799999
Q ss_pred HHHhhhhhcccc
Q psy5911 1016 ASVQAGVLSGVV 1027 (1242)
Q Consensus 1016 Aa~~a~~l~~~~ 1027 (1242)
||+.|+.-.|..
T Consensus 434 aA~lA~~a~G~~ 445 (504)
T 3ll3_A 434 AMFLARQALGLN 445 (504)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHcCcc
Confidence 999998766643
No 80
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.92 E-value=0.007 Score=72.59 Aligned_cols=210 Identities=13% Similarity=0.100 Sum_probs=112.0
Q ss_pred HHHHHHcCC----ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEE-EeecC-CCceEEEEEec------
Q psy5911 796 KDAGKIAGL----EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE-IANVD-GETQFEVLSTN------ 863 (1242)
Q Consensus 796 ~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~-~~~~~-~~~~~~v~~~~------ 863 (1242)
.++++..|| +++....+..||+++.+.... +. +++-+|.+++-..+.. -...+ +.+.+...+..
T Consensus 223 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~--g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (511)
T 3hz6_A 223 ALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDD--ED--AYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTL 298 (511)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCST--TC--EEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEE
T ss_pred HHHHHhhCCCCCCeEEEECchHHHHHHhCCCCCC--Cc--EEEEecchhhheeecCCeecccCCCCceEEEEEecCCceE
Confidence 356666665 566677888889988876432 22 3335676666555544 11111 21222111111
Q ss_pred --CCCCCCchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccC----CC---C
Q psy5911 864 --GDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADK----NG---P 934 (1242)
Q Consensus 864 --~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~----~~---~ 934 (1242)
+....|| ..++|+++.|... . .. .+..|.+.++++..... .....+.+|++.... +. +
T Consensus 299 ~~g~~~~~G-----~~~~W~~~~~~~~--~--~~---~~~~l~~~a~~~~~g~~-~~~gl~~~P~~~Ger~P~~d~~arg 365 (511)
T 3hz6_A 299 QVAPVLNAG-----NILQWALTLVGHR--P--GE---DCAEYFHMAAAEVQGVT-VPDGLLFVPYLHAERCPVELPAPRG 365 (511)
T ss_dssp EEEEESSSH-----HHHHHHGGGGTCC--T--TS---CSHHHHHHHHHHHTTCC-CCTTCEEEEESSCBCSSSCBSSCEE
T ss_pred EEeehhhHH-----HHHHHHHHHhccc--c--cc---cHHHHHHHHHhCCCCCC-CCCCEEEeCCCCCCCCCCCCCccce
Confidence 2223455 4566776665410 0 01 12344445555433200 011223444332110 00 0
Q ss_pred --eeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhh
Q psy5911 935 --KHLNVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAV 1012 (1242)
Q Consensus 935 --~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aV 1012 (1242)
..++..-+|.++-.. +++.+.-.++..++...- .. ++.|.++||+++++.+.+++.+.+|.++.....+.|+.
T Consensus 366 ~~~Gl~~~~~~~~l~RA---vlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~ 440 (511)
T 3hz6_A 366 ALLGVTGATTRAQILLA---VLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHP 440 (511)
T ss_dssp EEECCCTTCCHHHHHHH---HHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHH
T ss_pred EEEcCCCCCCHHHHHHH---HHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCch
Confidence 012223456666543 333333333333332221 23 78999999999999999999999999982345588999
Q ss_pred hhhHHHhhhhhcccc
Q psy5911 1013 AVGASVQAGVLSGVV 1027 (1242)
Q Consensus 1013 a~GAa~~a~~l~~~~ 1027 (1242)
|+|||+.|+.-.|..
T Consensus 441 alGaA~lA~~a~G~~ 455 (511)
T 3hz6_A 441 LRGLAALAAVELEWS 455 (511)
T ss_dssp HHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCCc
Confidence 999999998776643
No 81
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.60 E-value=0.0091 Score=71.70 Aligned_cols=203 Identities=17% Similarity=0.183 Sum_probs=105.3
Q ss_pred HcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEE-EEeecCCCceEEEE----------EecCCCCCC
Q psy5911 801 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVI-EIANVDGETQFEVL----------STNGDTFLG 869 (1242)
Q Consensus 801 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~-~~~~~~~~~~~~v~----------~~~~~~~lG 869 (1242)
-.|.+++....+..||+++.+.... +. +++-+|.+++-.... .-......+.+... ...+....|
T Consensus 255 ~~g~pV~~g~~D~~aa~~g~g~~~~--g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 330 (520)
T 4e1j_A 255 GAAIPILGVAGDQQAATIGQACFKP--GM--LKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVA 330 (520)
T ss_dssp TSCCBEEEECCHHHHHHHHTTCCST--TC--EEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCS
T ss_pred CCCCeEEEECCcHHHHHHhCCCCCC--Cc--EEEEecCchheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhH
Confidence 3688898888999999999875432 22 333456554332222 00001111222111 111223345
Q ss_pred chHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccc--------cCCC-CeeeEEE
Q psy5911 870 GEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITA--------DKNG-PKHLNVK 940 (1242)
Q Consensus 870 G~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~--------~~~~-~~~~~~~ 940 (1242)
|. .++|+.+.+.... ....+...++... .....+.+|++.- +..+ ...++..
T Consensus 331 G~-----~~~W~~~~~~~~~---------~~~~l~~~a~~~~-----~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~ 391 (520)
T 4e1j_A 331 GA-----AVQWLRDGLKVIK---------AAPDTGSLAESAD-----PSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRN 391 (520)
T ss_dssp HH-----HHHHHHHTTCCC--------------CHHHHHTSC-----TTCCCEEECCTTCBCTTTCBTTCCCEEEEECTT
T ss_pred HH-----HHHHHHHHcCCcc---------cHHHHHHHHhcCC-----CCCcEEEEcCccCCCCCCCCCCCCEEEecccCC
Confidence 54 6777777653210 1112222232221 1223345565421 1111 1112223
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 941 ITRSKLESLVEDLISKSLKPCEVALNDAKI-DKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 941 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
-+|.++-..+-+-+.--...+-+.|++.+. .. .++.|.++||.+++|.+.+++.+.+|.++..+ .+.|+.|+|||+.
T Consensus 392 ~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~l 469 (520)
T 4e1j_A 392 TGPAEFARAALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWL 469 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHH
Confidence 457666553333322222223333443310 01 47889999999999999999999999998754 4677999999999
Q ss_pred hhhhccccc
Q psy5911 1020 AGVLSGVVK 1028 (1242)
Q Consensus 1020 a~~l~~~~~ 1028 (1242)
|+.-.|..+
T Consensus 470 A~~a~G~~~ 478 (520)
T 4e1j_A 470 AGSRAGVWP 478 (520)
T ss_dssp HHHHHTSSC
T ss_pred HHHHcCCcC
Confidence 988776433
No 82
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.57 E-value=0.0058 Score=73.20 Aligned_cols=81 Identities=23% Similarity=0.356 Sum_probs=58.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhh
Q psy5911 942 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 942 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
++.++-..+-+-+.-....+-+.|++.+. .++.|.++||.+++|.+.+++.+.+|.++..+ .+.|+.|+|||+.|+
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~ 470 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQAA 470 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHHH
Confidence 66666554333332222333334555443 47899999999999999999999999998754 456789999999998
Q ss_pred hhccc
Q psy5911 1022 VLSGV 1026 (1242)
Q Consensus 1022 ~l~~~ 1026 (1242)
.-.+.
T Consensus 471 ~a~G~ 475 (515)
T 3i8b_A 471 WVLSG 475 (515)
T ss_dssp HHHHC
T ss_pred HHcCC
Confidence 76653
No 83
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.55 E-value=0.025 Score=61.33 Aligned_cols=75 Identities=16% Similarity=0.095 Sum_probs=55.6
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecC-ccChHHHHHHHHHhc---ccccccCCCcchhhHhH
Q psy5911 301 ITRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGG-QTRMPLVQKMVSEFF---EKEVKKDINPDEAVAVG 375 (1242)
Q Consensus 301 itr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~s~ip~v~~~l~~~f---~~~~~~~~~p~~ava~G 375 (1242)
.+++++-. ++.-+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+++.+ +.++..+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 45665543 445555555555444444443 456999999 899999999999885 67888899999999999
Q ss_pred HHHhh
Q psy5911 376 ASVQA 380 (1242)
Q Consensus 376 Aa~~a 380 (1242)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99874
No 84
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.34 E-value=0.023 Score=63.26 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=40.5
Q ss_pred cceEEEecC-ccChHHHHHHHHHhcc------cccccCCCcchhhHhHHHHhh
Q psy5911 335 ISEIILVGG-QTRMPLVQKMVSEFFE------KEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 335 i~~ViLvGG-~s~ip~v~~~l~~~f~------~~~~~~~~p~~ava~GAa~~a 380 (1242)
++.|+++|| .+..|.+++.|++.++ .++..+.+|..+-|.|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 456999999 9999999999999874 577888899999999999975
No 85
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.25 E-value=0.041 Score=59.66 Aligned_cols=75 Identities=16% Similarity=0.095 Sum_probs=53.7
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecC-cCchHHHHHHHHhhh---cccccccCCcchhhhhh
Q psy5911 941 ITRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGG-QTRMPLVQKMVSEFF---EKEVKKDINPDEAVAVG 1015 (1242)
Q Consensus 941 itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG-~s~ip~v~~~l~~~f---~~~v~~~~~p~~aVa~G 1015 (1242)
.+++++-. ++.-+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+.+.+ +.++..+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 35555443 334444444444443334333 456999999 899999999999875 67888899999999999
Q ss_pred HHHhh
Q psy5911 1016 ASVQA 1020 (1242)
Q Consensus 1016 Aa~~a 1020 (1242)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99875
No 86
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.10 E-value=0.037 Score=61.70 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=40.7
Q ss_pred cceEEEecC-cCchHHHHHHHHhhhc------ccccccCCcchhhhhhHHHhh
Q psy5911 975 ISEIILVGG-QTRMPLVQKMVSEFFE------KEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 975 i~~ViLvGG-~s~ip~v~~~l~~~f~------~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
++.|+++|| .+..|.+++.|++.++ .++..+.+|..+-|.|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 456999999 9999999999999874 578888999999999999975
No 87
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.98 E-value=0.01 Score=72.06 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=62.1
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHH---HHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhh
Q psy5911 938 NVKITRSKLESLVEDLISKSLKPCEV---ALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAV 1014 (1242)
Q Consensus 938 ~~~itr~~fe~~~~~~~~~~~~~i~~---~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~ 1014 (1242)
+..-+|.++-.++.-+++.+.-.++. .|++.+ ..++.|.++||.+++|.+.+++.+.||.++..+ ...++.|+
T Consensus 406 ~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g---~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~al 481 (554)
T 3l0q_A 406 KLSTTPEDMALRYLATIQALALGTRHIIETMNQNG---YNIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLL 481 (554)
T ss_dssp CSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHH
Confidence 34457888844344444444433333 344443 357899999999999999999999999998764 45679999
Q ss_pred hHHHhhhhhccc
Q psy5911 1015 GASVQAGVLSGV 1026 (1242)
Q Consensus 1015 GAa~~a~~l~~~ 1026 (1242)
|||+.|+.-.|.
T Consensus 482 GAA~lA~~a~G~ 493 (554)
T 3l0q_A 482 GSAMMGTVAAGV 493 (554)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHcCC
Confidence 999999877664
No 88
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.67 E-value=0.019 Score=69.11 Aligned_cols=86 Identities=17% Similarity=0.284 Sum_probs=60.5
Q ss_pred EEcHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHH
Q psy5911 940 KITRSKLESLVEDLI-SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 940 ~itr~~fe~~~~~~~-~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
.-+|.++-..+-+-+ -.+...++..-+..+. .++.|.++||+++++.+.+++.+.||.++..+ ...|+.|+|||+
T Consensus 370 ~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 370 GVNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHH
Confidence 346676655433322 2333333333234553 57899999999999999999999999998754 456789999999
Q ss_pred hhhhhcccccc
Q psy5911 1019 QAGVLSGVVKD 1029 (1242)
Q Consensus 1019 ~a~~l~~~~~~ 1029 (1242)
.|+.-.|..++
T Consensus 446 lA~~a~G~~~~ 456 (526)
T 3ezw_A 446 LAGLAVGFWQN 456 (526)
T ss_dssp HHHHHTTSSSC
T ss_pred HHHHHhCCCCC
Confidence 99987775443
No 89
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.59 E-value=0.015 Score=69.39 Aligned_cols=82 Identities=17% Similarity=0.181 Sum_probs=57.4
Q ss_pred EcHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 941 ITRSKLESLV-EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 941 itr~~fe~~~-~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
-++.++-..+ +.+.-.+... -+.+++.+ ..++.|.++||.++++.+.+++.+.+|.++..+..++.+.|+|||+.
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~-~~~l~~~g---~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADG-MDVVHACG---IKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH-HHHHHTTT---CCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HHHHHHcC---CCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHH
Confidence 3566654433 2222222222 23334433 35788999999999999999999999999987766665699999999
Q ss_pred hhhhccc
Q psy5911 1020 AGVLSGV 1026 (1242)
Q Consensus 1020 a~~l~~~ 1026 (1242)
|+.-.+.
T Consensus 432 A~~~~g~ 438 (484)
T 2itm_A 432 AQIAANP 438 (484)
T ss_dssp HHHHHCT
T ss_pred HHHHcCC
Confidence 9876653
No 90
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.56 E-value=0.023 Score=68.06 Aligned_cols=211 Identities=20% Similarity=0.194 Sum_probs=109.8
Q ss_pred HHHHHHcCC----ceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEec-CCC-C-C
Q psy5911 796 KDAGKIAGL----EVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTN-GDT-F-L 868 (1242)
Q Consensus 796 ~~Aa~~AGl----~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~-~~~-~-l 868 (1242)
.++++..|| .+..-..+..||+++.+.... +. +++-+|.+++-..+..-...++ . +...+.. .+. . .
T Consensus 225 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~---g~-~~~s~GTs~~~~~~~~~~~~~~-~-~~~~~~~~~g~~~~~ 298 (508)
T 3ifr_A 225 AEAAALTGLPTGLPVYGGAADHIASALAAGITRP---GD-VLLKFGGAGDIIVASATAKSDP-R-LYLDYHLVPGLYAPN 298 (508)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCST---TE-EEEEESSSEEEEECBSCCCCBT-T-BBCCBCSSTTCBCCE
T ss_pred HHHHHHhCCCCCCeEEEECchHHHHHHhCCCCCC---Cc-EEEEechhhhheeeCCCcccCC-C-cceeeeecCCceEEe
Confidence 356666665 466677888889998876432 22 3335666655444332110011 1 1111110 010 0 1
Q ss_pred CchHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccc--------cCCC-CeeeEE
Q psy5911 869 GGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITA--------DKNG-PKHLNV 939 (1242)
Q Consensus 869 GG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~--------~~~~-~~~~~~ 939 (1242)
|+..---..++|+++.|.. .+ .+ ..+..|.+.+++... .....+.+|.+.- +..+ ...++.
T Consensus 299 g~~~~~G~~~~W~~~~~~~-~~----~~-~~~~~l~~~a~~~~~----~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~ 368 (508)
T 3ifr_A 299 GCMAATGSALNWLAKLLAP-EA----GE-AAHAQLDALAAEVPA----GADGLVCLPYFLGEKTPIHDPFASGTFTGLSL 368 (508)
T ss_dssp EEESSSHHHHHHHHHHHST-TC----TT-HHHHHHHHHHHTSCT----TGGGCEEECCTTCCC----CCCCCCEEESCCT
T ss_pred chhhhhHHHHHHHHHHHhh-cC----CC-CCHHHHHHHHhcCCC----CCCCeEEecCCCCCCCCCCCCCcCEEEECCCC
Confidence 1112122446677776631 11 00 123444444443221 1222344554321 1111 011122
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 940 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 940 ~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
.-++.++-..+-+-+.-....+-+.|++.+. .++.|.++||.++++.+.+++.+.+|.++..+.. .|+.|+|||+.
T Consensus 369 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~l 444 (508)
T 3ifr_A 369 SHTRGHLWRALLEAVALAFRHHVAVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWV 444 (508)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHH
Confidence 3367776554433333222333344455443 4788999999999999999999999999876654 56889999999
Q ss_pred hhhhccc
Q psy5911 1020 AGVLSGV 1026 (1242)
Q Consensus 1020 a~~l~~~ 1026 (1242)
|+.-.|.
T Consensus 445 A~~a~G~ 451 (508)
T 3ifr_A 445 AAIGGGD 451 (508)
T ss_dssp HHHHTCS
T ss_pred HHHHhCC
Confidence 9877664
No 91
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.53 E-value=0.02 Score=68.49 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=57.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhh
Q psy5911 942 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 942 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
++.++-. -+++.+.-.++..++...... .++.|.++||.++++.+.+++.+.+|.++..+. +.++.|+|||+.|+
T Consensus 365 ~~~~l~r---AvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLAR---ATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAG 439 (497)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHH
Confidence 5555544 344444444444444333222 578899999999999999999999999987544 45699999999998
Q ss_pred hhccc
Q psy5911 1022 VLSGV 1026 (1242)
Q Consensus 1022 ~l~~~ 1026 (1242)
.-.|.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76653
No 92
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.47 E-value=0.028 Score=67.27 Aligned_cols=83 Identities=14% Similarity=0.280 Sum_probs=58.6
Q ss_pred EcHHHHHHHHHHHH-HHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHH
Q psy5911 941 ITRSKLESLVEDLI-SKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 1018 (1242)
Q Consensus 941 itr~~fe~~~~~~~-~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~ 1018 (1242)
-+|.++-..+-+-+ -.+...+ +.|++ .+. .++.|.++||.++++.+.+++.+.+|.++.. ..+.|+.|+|||+
T Consensus 373 ~~~~~l~RAvlEgia~~~~~~~-~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~-~~~~e~~alGaA~ 447 (501)
T 3g25_A 373 TEKEHFIRATLESLCYQTRDVM-EAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVER-PEIQETTALGAAF 447 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE-ESCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEe-cCCCcchHHHHHH
Confidence 35666655333322 3333333 33333 443 4789999999999999999999999999865 4467899999999
Q ss_pred hhhhhccccc
Q psy5911 1019 QAGVLSGVVK 1028 (1242)
Q Consensus 1019 ~a~~l~~~~~ 1028 (1242)
.|+.-.|..+
T Consensus 448 la~~a~G~~~ 457 (501)
T 3g25_A 448 LAGLAVGFWE 457 (501)
T ss_dssp HHHHHTTSSS
T ss_pred HHHHHhCccC
Confidence 9987766433
No 93
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.44 E-value=0.023 Score=68.47 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhhcc
Q psy5911 948 SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 948 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l~~ 1025 (1242)
.+++-+++.+.-.++..++..+.....++.|.++||+++++.+.+++.+.||.++..+ .+.|+.|+|||+.|+.-.|
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3444445555444555555544434467899999999999999999999999998754 4578999999999987554
No 94
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.42 E-value=0.026 Score=68.38 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=61.8
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 300 KITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 300 ~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
.-||.++-.++.-+++.+.-.++..++...-....++.|.++||.++.+.+.+++.+.||.++..+. ..++.|+|||+.
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~-~~e~~alGAA~l 486 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPE-ESEAMLLGSAMM 486 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEES-CSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEecC-CCcchHHHHHHH
Confidence 4478887444555555554444444432211223578999999999999999999999999987654 467999999999
Q ss_pred hhhhcCC
Q psy5911 380 AGVLSGV 386 (1242)
Q Consensus 380 a~~l~~~ 386 (1242)
|+.-.|.
T Consensus 487 A~~a~G~ 493 (554)
T 3l0q_A 487 GTVAAGV 493 (554)
T ss_dssp HHHHTTS
T ss_pred HHHHcCC
Confidence 9876654
No 95
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.34 E-value=0.031 Score=66.90 Aligned_cols=199 Identities=18% Similarity=0.244 Sum_probs=107.0
Q ss_pred cCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEee-cCCCceEEEE----------EecCCCCCCc
Q psy5911 802 AGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIAN-VDGETQFEVL----------STNGDTFLGG 870 (1242)
Q Consensus 802 AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~-~~~~~~~~v~----------~~~~~~~lGG 870 (1242)
.|.+++....+..||+++.+.... +. +++-+|.+++-.....-.. ....+.+... ...+....||
T Consensus 236 ~g~pV~~g~~D~~aa~~g~g~~~~--g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G 311 (506)
T 3h3n_X 236 SEVPIAGMAGDQQAALFGQMAFEK--GM--IKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAG 311 (506)
T ss_dssp CCCEEEEEEEHHHHHHHHTTCCST--TC--EEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEETTEEEEEEEEEECCSS
T ss_pred CCCeEEEECCcHHHHHHhCCCCCC--Cc--EEEEecchheeeeecCCccccCCCceEEEeeeecCCCCEEEEecchhhHH
Confidence 678888888899999998875432 22 3335666554222221110 0111222111 1122234566
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccc--------cCCC-CeeeEEEE
Q psy5911 871 EDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITA--------DKNG-PKHLNVKI 941 (1242)
Q Consensus 871 ~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~--------~~~~-~~~~~~~i 941 (1242)
. .++|+.+.|... .+. ..+...++.. .. ...-+.+|.+.- +..+ ...++..-
T Consensus 312 ~-----~~~W~~~~~~~~------~~~---~~l~~~a~~~----~~-~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~ 372 (506)
T 3h3n_X 312 S-----AIQWLRDGLRMI------ETS---PQSEELAAKA----KG-DNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGT 372 (506)
T ss_dssp H-----HHHHHHHTSCCC------SST---THHHHHHTTC----CS-CSCCEEECCTTCBCTTTCBTTCCCEEECCCTTC
T ss_pred H-----HHHHHHHHcCCC------CcH---HHHHHHHhcC----CC-CCceEEeccccCCCCCccCCCCCEEEEccCCCC
Confidence 4 567777665321 011 1122222221 11 122344565421 1111 01122334
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 942 TRSKLESLVEDLISKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 942 tr~~fe~~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
++.++-..+-+-+.-....+-+.|++ .+. .++.|.++||+++++.+.+++.+.+|.++.. ..+.|+.|+|||+.|
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA 448 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQR-AANLETTALGAAYLA 448 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEE-CSSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEe-cCCCcchhHHHHHHH
Confidence 67766654333332222223333433 343 4788999999999999999999999999875 456789999999999
Q ss_pred hhhcccc
Q psy5911 1021 GVLSGVV 1027 (1242)
Q Consensus 1021 ~~l~~~~ 1027 (1242)
+.-.|..
T Consensus 449 ~~a~G~~ 455 (506)
T 3h3n_X 449 GLAVGFW 455 (506)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8776643
No 96
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.28 E-value=0.033 Score=61.79 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCCeeeeechHHHHHHHhccCCC-CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcc
Q psy5911 151 QRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG 229 (1242)
Q Consensus 151 qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lG 229 (1242)
+...+..+-+..|+++--+-.|.+|...+.+.... ......+|+|+|||++.+++.+- +.+. ......+|
T Consensus 99 ~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~------~~~~---~~~Sl~~G 169 (315)
T 1t6c_A 99 AEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKG------YKVR---EVISLPIG 169 (315)
T ss_dssp HHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEET------TEEE---EEEEECCC
T ss_pred HHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeC------Ccee---eEEEEecc
Confidence 34445555557899876666666665554432211 13456899999999999999751 2221 12235679
Q ss_pred hHHHHHHH
Q psy5911 230 GEDFDMRI 237 (1242)
Q Consensus 230 G~~iD~~l 237 (1242)
+..+.+.+
T Consensus 170 ~v~l~e~~ 177 (315)
T 1t6c_A 170 IVNLTETF 177 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98877664
No 97
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.25 E-value=0.026 Score=68.60 Aligned_cols=81 Identities=16% Similarity=0.267 Sum_probs=58.7
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 941 ITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 941 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
-++.+|-..+-+-+.-....+-+.|++.+ ..++.|.++||++ +++.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIVDAFHGRG---VEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTT---CCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 36777655443333322333334455544 3578999999999 99999999999999998754 4678999999999
Q ss_pred hhhhcc
Q psy5911 1020 AGVLSG 1025 (1242)
Q Consensus 1020 a~~l~~ 1025 (1242)
|+.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987665
No 98
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.23 E-value=0.034 Score=66.53 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=57.3
Q ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 942 TRSKLESLVEDLI-SKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 942 tr~~fe~~~~~~~-~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
++.++-..+-+-+ -.+...+ +.|++ .+. .++.|.++||+++++.+.+++.+.+|.++..+ .+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~-~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVL-EAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHH
Confidence 5666655333322 2333333 33333 243 47889999999999999999999999998754 4677999999999
Q ss_pred hhhhcccc
Q psy5911 1020 AGVLSGVV 1027 (1242)
Q Consensus 1020 a~~l~~~~ 1027 (1242)
|+.-.|..
T Consensus 446 A~~a~G~~ 453 (510)
T 2p3r_A 446 AGLAVGFW 453 (510)
T ss_dssp HHHHHTSS
T ss_pred HHHHhCcc
Confidence 98776643
No 99
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.18 E-value=0.032 Score=66.86 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=58.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
||.++ +.-+++.+.-.++..++...- .. ++.|.++||.++.+.+.+++.+.+|.++.....+.++.|+|||+.|+
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~ 449 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAA 449 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHH
Confidence 56555 444444444444444443322 33 78999999999999999999999999982344588999999999998
Q ss_pred hhcCCc
Q psy5911 382 VLSGVV 387 (1242)
Q Consensus 382 ~l~~~~ 387 (1242)
.-.|..
T Consensus 450 ~a~G~~ 455 (511)
T 3hz6_A 450 VELEWS 455 (511)
T ss_dssp HHTTSC
T ss_pred HHhCCc
Confidence 766643
No 100
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.09 E-value=0.028 Score=66.98 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=56.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
++.++ +.-+++.+.-.++..++........++.|.++||.++.+.+.+++.+.+|.++..+..++.+.|+|||+.|+
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~ 433 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQ 433 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHH
Confidence 45554 334444443333333332211123477899999999999999999999999998776666568999999998
Q ss_pred hhcCC
Q psy5911 382 VLSGV 386 (1242)
Q Consensus 382 ~l~~~ 386 (1242)
.-.+.
T Consensus 434 ~~~g~ 438 (484)
T 2itm_A 434 IAANP 438 (484)
T ss_dssp HHHCT
T ss_pred HHcCC
Confidence 76553
No 101
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.01 E-value=0.039 Score=65.90 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=58.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
++.++ +.-+++.+.-.++..++...... .++.|.++||.++.+.+.+++.+.+|.++..+. +.++.|+|||+.|+
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAG 439 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHH
Confidence 45444 44455555555555555443323 578899999999999999999999999987654 45699999999998
Q ss_pred hhcCC
Q psy5911 382 VLSGV 386 (1242)
Q Consensus 382 ~l~~~ 386 (1242)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76553
No 102
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=94.99 E-value=0.9 Score=50.53 Aligned_cols=43 Identities=23% Similarity=0.255 Sum_probs=29.2
Q ss_pred cCCCeeeeechHHHHHHHhccC-CCCCCcEEEEEEeCCcceeeeEE
Q psy5911 162 AGLEVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
.|++ +.+.|+..|||++-... .....++++++-+|.| +-..++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 4776 68999999999974322 2223456777788887 555555
No 103
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.88 E-value=0.045 Score=65.39 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHH
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVA---LNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~---l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 378 (1242)
+|.++- .-+++.+.-.++.. |++.+ ..++.|.++||.++.+.+.+++.+.||.++... .+.++.|+|||+
T Consensus 364 ~~~~l~---RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~ 436 (504)
T 3ll3_A 364 QKPEMA---RAVIEGIIFNLYDAASNLIKNT---KKPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMF 436 (504)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHHTTS---CCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHH
Confidence 565553 34444443333333 33333 258899999999999999999999999998764 456799999999
Q ss_pred hhhhhcCC
Q psy5911 379 QAGVLSGV 386 (1242)
Q Consensus 379 ~a~~l~~~ 386 (1242)
.|+.-.|.
T Consensus 437 lA~~a~G~ 444 (504)
T 3ll3_A 437 LARQALGL 444 (504)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCc
Confidence 99876653
No 104
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=94.80 E-value=0.05 Score=65.57 Aligned_cols=78 Identities=14% Similarity=0.176 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcC
Q psy5911 307 ESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 307 e~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~ 385 (1242)
..++.-+++.+.-.++..++..+.....++.|.++||.++.+.+.+++.+.||.++..+ .+.++.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 34455566666555566666555444567899999999999999999999999998754 4578999999999986543
No 105
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.69 E-value=0.055 Score=64.73 Aligned_cols=82 Identities=20% Similarity=0.326 Sum_probs=57.6
Q ss_pred EcHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 941 ITRSKLESLV-EDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 941 itr~~fe~~~-~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
-++.++-..+ +.+.-.+...++..-+..+. .++.|.++||.++++.+.+++.+.+|.++..+ .+.|+.|+|||+.
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHH
Confidence 3566665533 33333333333332222343 46789999999999999999999999998754 4567999999999
Q ss_pred hhhhccc
Q psy5911 1020 AGVLSGV 1026 (1242)
Q Consensus 1020 a~~l~~~ 1026 (1242)
|+.-.|.
T Consensus 448 A~~~~G~ 454 (504)
T 2d4w_A 448 AGIAVGF 454 (504)
T ss_dssp HHHHHTS
T ss_pred HHhhcCc
Confidence 9876653
No 106
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.66 E-value=0.067 Score=64.30 Aligned_cols=84 Identities=18% Similarity=0.296 Sum_probs=58.7
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 301 ITRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 301 itr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
-+|.++-. +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+++.+.||.++..+. ..|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~-~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeCC-CCchHHHHHHHH
Confidence 35655543 3333333333334333334453 478999999999999999999999999987654 457899999999
Q ss_pred hhhhcCCcc
Q psy5911 380 AGVLSGVVK 388 (1242)
Q Consensus 380 a~~l~~~~~ 388 (1242)
|+.-.|..+
T Consensus 447 A~~a~G~~~ 455 (526)
T 3ezw_A 447 AGLAVGFWQ 455 (526)
T ss_dssp HHHHTTSSS
T ss_pred HHHHhCCCC
Confidence 988776433
No 107
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.50 E-value=0.044 Score=65.46 Aligned_cols=82 Identities=18% Similarity=0.328 Sum_probs=57.0
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.+|.++... .+.++.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 4555443 3333333333333333222443 47899999999999999999999999998654 46779999999999
Q ss_pred hhhcCCc
Q psy5911 381 GVLSGVV 387 (1242)
Q Consensus 381 ~~l~~~~ 387 (1242)
+.-.|..
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766643
No 108
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.40 E-value=0.074 Score=63.59 Aligned_cols=81 Identities=19% Similarity=0.254 Sum_probs=56.2
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccCc-ceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHh
Q psy5911 942 TRSKLESL-VEDLISKSLKPCEVALNDAKIDKSKI-SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 1019 (1242)
Q Consensus 942 tr~~fe~~-~~~~~~~~~~~i~~~l~~~~~~~~~i-~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~ 1019 (1242)
++.++-.. ++.+.-.+...++..-+..+. .+ +.|.++||.++++.+.+++.+.+|.++... .+.++.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 56665543 333333333333332222343 35 789999999999999999999999998754 4566999999999
Q ss_pred hhhhccc
Q psy5911 1020 AGVLSGV 1026 (1242)
Q Consensus 1020 a~~l~~~ 1026 (1242)
|+.-.|.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876653
No 109
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.35 E-value=0.065 Score=63.95 Aligned_cols=80 Identities=21% Similarity=0.279 Sum_probs=55.3
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhh
Q psy5911 942 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 942 tr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a 1020 (1242)
++.++-. +++.+.-.+...++..-+..+ ..++.|.++||.++++.+.+++.+.+|.++... .+.++.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAG---VRLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTS---CCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5666544 333333333333332222233 246789999999999999999999999998754 45669999999999
Q ss_pred hhhcc
Q psy5911 1021 GVLSG 1025 (1242)
Q Consensus 1021 ~~l~~ 1025 (1242)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 87655
No 110
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=94.34 E-value=0.049 Score=65.13 Aligned_cols=79 Identities=27% Similarity=0.425 Sum_probs=55.5
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
++.++-. +++.+.-.+...++ .|++.+. .++.|.++||.++.|.+.+++.+.+|.++..+ .+.++.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 5555433 33333333333332 3444443 47899999999999999999999999998764 45678899999999
Q ss_pred hhhcC
Q psy5911 381 GVLSG 385 (1242)
Q Consensus 381 ~~l~~ 385 (1242)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 87655
No 111
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.30 E-value=0.043 Score=65.63 Aligned_cols=80 Identities=23% Similarity=0.214 Sum_probs=56.4
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.++-. +++.+.-.+...++ .|++.+. .++.|.++||.++.+.+.+++.+.+|.++..... .++.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 5665533 33333333333333 3344443 4788999999999999999999999999876654 458899999999
Q ss_pred hhhcCC
Q psy5911 381 GVLSGV 386 (1242)
Q Consensus 381 ~~l~~~ 386 (1242)
+.-.+.
T Consensus 446 ~~a~G~ 451 (508)
T 3ifr_A 446 AIGGGD 451 (508)
T ss_dssp HHHTCS
T ss_pred HHHhCC
Confidence 876653
No 112
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=94.27 E-value=7.5 Score=42.35 Aligned_cols=48 Identities=23% Similarity=0.373 Sum_probs=35.5
Q ss_pred CcceEEEecCccChHHHHHHHHHhccc-ccccCCCcchhhHhHHHHhhhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEK-EVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~-~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+++.|+|.||.+..+.+.+.+++.+.. ++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 457899999988778888888777743 455455 667889999987743
No 113
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.16 E-value=0.038 Score=66.23 Aligned_cols=53 Identities=21% Similarity=0.250 Sum_probs=44.6
Q ss_pred CcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhhhhhcCCc
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVLSGVV 387 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~l~~~~ 387 (1242)
.++.|.++||.++.|.+.+++.+.+|.++..+ .+.|+.|+|||+.|+.-.|..
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47889999999999999999999999998764 456799999999998766643
No 114
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.14 E-value=0.052 Score=64.95 Aligned_cols=81 Identities=20% Similarity=0.332 Sum_probs=56.8
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.+|.++..+ .+.|+.|+|||+.|
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 448 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLA 448 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHH
Confidence 5665543 3333333333333332222343 47889999999999999999999999998754 46779999999999
Q ss_pred hhhcCC
Q psy5911 381 GVLSGV 386 (1242)
Q Consensus 381 ~~l~~~ 386 (1242)
+.-.|.
T Consensus 449 ~~a~G~ 454 (506)
T 3h3n_X 449 GLAVGF 454 (506)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 876664
No 115
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.12 E-value=0.05 Score=65.10 Aligned_cols=81 Identities=19% Similarity=0.298 Sum_probs=56.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.+|.++..+. +.++.|+|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEecC-CCCcHHHHHHHHH
Confidence 4555433 3333333333333332222343 478899999999999999999999999987644 6679999999999
Q ss_pred hhhcCC
Q psy5911 381 GVLSGV 386 (1242)
Q Consensus 381 ~~l~~~ 386 (1242)
+.-.|.
T Consensus 447 ~~a~G~ 452 (510)
T 2p3r_A 447 GLAVGF 452 (510)
T ss_dssp HHHHTS
T ss_pred HHHhCc
Confidence 876664
No 116
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=94.10 E-value=2.1 Score=47.70 Aligned_cols=68 Identities=18% Similarity=0.146 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc---ccccccCCC---cchhhHhHHHHhhhhhcC
Q psy5911 313 LISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDIN---PDEAVAVGASVQAGVLSG 385 (1242)
Q Consensus 313 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~~---p~~ava~GAa~~a~~l~~ 385 (1242)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+.. -|.+++.|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445556666666554 578999999999999999999887 556554433 478899998876544343
No 117
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.09 E-value=1.9 Score=47.85 Aligned_cols=48 Identities=21% Similarity=0.312 Sum_probs=32.5
Q ss_pred cceEEEecCccC-hHHHHHHHHHhcc----------cccccCCCcchhhHhHHHHhhhh
Q psy5911 335 ISEIILVGGQTR-MPLVQKMVSEFFE----------KEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 335 i~~ViLvGG~s~-ip~v~~~l~~~f~----------~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
++.|+|.||.+. .|.+.+.+++.+. .++......+.+.++|||..+..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 568999999886 5776666665552 12333445667899999987653
No 118
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.06 E-value=0.059 Score=65.49 Aligned_cols=80 Identities=16% Similarity=0.283 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.+| +.-+++.+.-.++..++...-....++.|.++||.+ +.+.+.+++.+.||.++... .+.++.|+|||+.|
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 485 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMFA 485 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHHH
Confidence 56654 444444443333333332211223578999999999 99999999999999998654 45789999999999
Q ss_pred hhhcC
Q psy5911 381 GVLSG 385 (1242)
Q Consensus 381 ~~l~~ 385 (1242)
+.-.|
T Consensus 486 ~~a~G 490 (572)
T 3jvp_A 486 SVAAG 490 (572)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 87655
No 119
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=93.93 E-value=9.5 Score=42.24 Aligned_cols=63 Identities=14% Similarity=0.118 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc---ccccccCC---CcchhhHhHHHHhhhh
Q psy5911 315 SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQAGV 382 (1242)
Q Consensus 315 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~---~p~~ava~GAa~~a~~ 382 (1242)
+.+.+.++++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. --|.+++.|+|.+...
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 344445555555433 568999999999999999999876 45555444 2366888998776543
No 120
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.75 E-value=0.12 Score=61.71 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=53.2
Q ss_pred EEcHHHHHHHHHH-HHHHHHHHHHHHHHh-cCCCccCcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHH
Q psy5911 940 KITRSKLESLVED-LISKSLKPCEVALND-AKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGAS 1017 (1242)
Q Consensus 940 ~itr~~fe~~~~~-~~~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa 1017 (1242)
.-+|.++-..+-+ +.-.+...+ +.+++ .+. .++.|.++||.++++.+.+++.+.+|.++.... .++.|.|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~-~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVL-HELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-HHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHH
Confidence 4567776654333 333333333 33333 343 468899999999999999999999999987543 589999996
Q ss_pred Hhhhh
Q psy5911 1018 VQAGV 1022 (1242)
Q Consensus 1018 ~~a~~ 1022 (1242)
+.|..
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 121
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.65 E-value=0.12 Score=61.78 Aligned_cols=80 Identities=21% Similarity=0.285 Sum_probs=55.1
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLE-SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe-~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
++.++- .+++.+.-.+...++..-+..+ ..++.|.++||.++.+.+.+++.+.+|.++... .+.++.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAG---VRLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTS---CCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 455543 2334444444443333222223 346789999999999999999999999998755 45568999999999
Q ss_pred hhhcC
Q psy5911 381 GVLSG 385 (1242)
Q Consensus 381 ~~l~~ 385 (1242)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 87555
No 122
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=93.65 E-value=5.2 Score=44.37 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=32.3
Q ss_pred CcceEEEecCccChHHHHHHHHHhccc---------ccccCCCcchhhHhHHHHhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEK---------EVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~---------~~~~~~~p~~ava~GAa~~a 380 (1242)
+++.|+|-||.+..+.+.+.+++.+.. ++....-.+.+.++|||..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 357899999988877666667665532 22333445678999998765
No 123
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=93.56 E-value=2 Score=47.69 Aligned_cols=47 Identities=17% Similarity=0.173 Sum_probs=32.4
Q ss_pred CcceEEEecCccCh-HHHHHHHHHhcc----------cccccCCCcchhhHhHHHHhh
Q psy5911 334 KISEIILVGGQTRM-PLVQKMVSEFFE----------KEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 334 ~i~~ViLvGG~s~i-p~v~~~l~~~f~----------~~~~~~~~p~~ava~GAa~~a 380 (1242)
+++.|+|.||.++. +.+.+.|++.+. .++......+.+.++|||.++
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 35789999998876 565555554441 234455566789999999876
No 124
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.11 E-value=0.1 Score=62.44 Aligned_cols=81 Identities=20% Similarity=0.324 Sum_probs=57.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHhh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 380 (1242)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.+|.++..+ .+.++.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 5655543 3344444444444433233343 36789999999999999999999999998754 45679999999999
Q ss_pred hhhcCC
Q psy5911 381 GVLSGV 386 (1242)
Q Consensus 381 ~~l~~~ 386 (1242)
+.-.|.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876653
No 125
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=93.03 E-value=0.099 Score=62.50 Aligned_cols=80 Identities=20% Similarity=0.266 Sum_probs=55.8
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCc-ceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHHh
Q psy5911 302 TRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKI-SEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQ 379 (1242)
Q Consensus 302 tr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i-~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 379 (1242)
+|.++-. +++.+.-.+...++..-+..+. .+ +.|.++||.++.+.+.+++.+.+|.++... .+.++.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 4555433 3344444444444333222343 35 789999999999999999999999998754 4556899999999
Q ss_pred hhhhcC
Q psy5911 380 AGVLSG 385 (1242)
Q Consensus 380 a~~l~~ 385 (1242)
|+.-.+
T Consensus 452 a~~~~G 457 (503)
T 2w40_A 452 AGLEVK 457 (503)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987655
No 126
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=92.31 E-value=11 Score=41.29 Aligned_cols=44 Identities=20% Similarity=0.182 Sum_probs=28.1
Q ss_pred HcCCCeeeeechHHHHHHHhccC-CCCCCcEEEEEEeCCcceeeeEE
Q psy5911 161 IAGLEVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 161 ~AGl~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
..|++ +.+.|+..|||++-... .....++++++-+|.| +-.+++
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 34665 57999999999875322 2223456777788877 444444
No 127
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=91.91 E-value=0.16 Score=60.41 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=52.6
Q ss_pred EEcHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcccccccCCCcchhhHhHHHH
Q psy5911 300 KITRSKLES-LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASV 378 (1242)
Q Consensus 300 ~itr~~fe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 378 (1242)
.-+|.++-. +++.+.-.+...++..-+..+. .++.|.++||.++.+.+.+++.+.+|.++.... .++.|.|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 346666543 3344433433433333222343 467899999999999999999999999987543 5899999965
Q ss_pred hhhh
Q psy5911 379 QAGV 382 (1242)
Q Consensus 379 ~a~~ 382 (1242)
.|..
T Consensus 436 ~A~~ 439 (489)
T 2uyt_A 436 IQLM 439 (489)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 128
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=91.40 E-value=12 Score=42.44 Aligned_cols=47 Identities=23% Similarity=0.209 Sum_probs=30.7
Q ss_pred cceEEEecCccCh-HHHHHHHHHhcc--------cccccCCCcchhhHhHHHHhhh
Q psy5911 335 ISEIILVGGQTRM-PLVQKMVSEFFE--------KEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 335 i~~ViLvGG~s~i-p~v~~~l~~~f~--------~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
++.|+|.||.+.. |.+.+.+++.+. .++......+.+.+.|||..+.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 5679999998864 666666665542 1233333455689999998763
No 129
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=91.36 E-value=0.24 Score=54.78 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHccCCCCC-CCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCc
Q psy5911 792 RQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKP-DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGG 870 (1242)
Q Consensus 792 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~-~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG 870 (1242)
...+..+-+..|+++-.+-.|.+|...+.+....- .....+|+|+|||+|.+++.+- +.+. ...+..+|+
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~------~~~~---~~~Sl~~G~ 170 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKG------YKVR---EVISLPIGI 170 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEET------TEEE---EEEEECCCH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeC------Ccee---eEEEEeccH
Confidence 44555555678999866666667655443322111 2456889999999999999852 2221 122356799
Q ss_pred hHHHHHH
Q psy5911 871 EDFDMRI 877 (1242)
Q Consensus 871 ~~~D~~l 877 (1242)
..+.+.+
T Consensus 171 v~l~e~~ 177 (315)
T 1t6c_A 171 VNLTETF 177 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8776665
No 130
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.28 E-value=0.29 Score=57.81 Aligned_cols=72 Identities=11% Similarity=0.047 Sum_probs=53.1
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhh-hcccccccCCcchhhhhhHHHhhhhh
Q psy5911 947 ESLVEDLISK--SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEF-FEKEVKKDINPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 947 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~-f~~~v~~~~~p~~aVa~GAa~~a~~l 1023 (1242)
..+++-+++. +.-.++.+++...- .+.|.++||++++|.+.+++.+. ||.++..+. ..|+.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 3445555553 44445555554431 26899999999999999999999 999987665 4568899999999764
No 131
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.11 E-value=5.8 Score=43.63 Aligned_cols=56 Identities=20% Similarity=0.306 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHccCCC--CCCCcEEEEEeeCCCceEEEEEE
Q psy5911 792 RQATKDAGKIAGLEVLRIINEPTAAALAYGLDK--KPDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 792 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~--~~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
...+.++-+..|+++--+-.|-+|...+.+... .......+|+|+|||+|.+++++
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE
Confidence 344566666789988555455555433332211 11234578889999999999986
No 132
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=90.73 E-value=24 Score=39.23 Aligned_cols=60 Identities=10% Similarity=-0.014 Sum_probs=40.8
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHHHHH-cC--CCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcc
Q psy5911 135 KIEKAVITVPAYFNDSQRQATKDAGKI-AG--LEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGT 200 (1242)
Q Consensus 135 ~~~~~vitVPa~f~~~qr~~~~~Aa~~-AG--l~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT 200 (1242)
++..+.|++|...+......+.+..+. .| .-.+.+.|+..|||+++ .. ...+++=+|.|.
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~~-----~~~v~v~~GTGi 132 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-TP-----DGGVVLISGTGS 132 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-CS-----SCEEEEEESSSE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-CC-----CCcEEEEEcCCc
Confidence 467899999999987665566665544 34 13568999999999984 21 234445566654
No 133
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=88.95 E-value=0.53 Score=55.53 Aligned_cols=72 Identities=11% Similarity=0.045 Sum_probs=54.2
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHh-cccccccCCCcchhhHhHHHHhhhhh
Q psy5911 307 ESLVEDLISK--SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEF-FEKEVKKDINPDEAVAVGASVQAGVL 383 (1242)
Q Consensus 307 e~l~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~-f~~~~~~~~~p~~ava~GAa~~a~~l 383 (1242)
..++.-+++. +.-.++.+++...- .+.|.++||.+++|.+.+++.+. ||.++..+.. .++.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~-~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTANA-HNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESS-CCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCC-CchHHHHHHHHhCcc
Confidence 4455555553 44455556655432 26899999999999999999999 9999876654 568899999999764
No 134
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=85.70 E-value=32 Score=37.75 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=28.7
Q ss_pred cCCCeeeeechHHHHHHHhccCC-CCCCcEEEEEEeCCcceeeeEE
Q psy5911 162 AGLEVLRIINEPTAAALAYGLDK-KPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~~-~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
.|++ +.+.|+..|||++-.... ....+.++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4666 689999999999743222 123467777788887 445544
No 135
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=80.63 E-value=56 Score=38.79 Aligned_cols=183 Identities=17% Similarity=0.206 Sum_probs=90.7
Q ss_pred CCCcEEEEe-cCCCCHHHHHHH--HHHHHHcCCCeeeeechHHHHHHHhccCCC-CCCcEEEEEEeCCcceeeeEEEEEe
Q psy5911 135 KIEKAVITV-PAYFNDSQRQAT--KDAGKIAGLEVLRIINEPTAAALAYGLDKK-PDDRIIVVYDLGGGTFDISVIEIAN 210 (1242)
Q Consensus 135 ~~~~~vitV-Pa~f~~~qr~~~--~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~-~~~~~vlV~D~GggT~Dvsv~~~~~ 210 (1242)
.+..+++|. |.+|+....-.. +.-|...|.+.+. |+--.|-+++...... ..+ +++-+-||++.+-.+ ..
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~--~~ 145 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAY--VS 145 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEE--ET
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEE--eC
Confidence 466677766 777765432221 2233445766554 4544444333222111 223 445566777765433 33
Q ss_pred ecCCceEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCceeeeeccccccC
Q psy5911 211 VDGETQFEVLSTNGDTFLGGEDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITAD 290 (1242)
Q Consensus 211 ~~~~~~~~v~~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~ 290 (1242)
+.+++++..-|.. -|+.||.. ..+ .+......+ .|...|...+ ..+.+|....+
T Consensus 146 ----~~~~~lg~t~d~s-~G~~~D~~-a~~--------lgl~~~gg~----~ie~lA~~g~--------~~~~~p~~~~~ 199 (540)
T 3en9_A 146 ----KKYRVFGETLDIA-VGNCLDQF-ARY--------VNLPHPGGP----YIEELARKGK--------KLVDLPYTVKG 199 (540)
T ss_dssp ----TEEEEEEEBSSSC-HHHHHHHH-HHH--------TTCCSSCHH----HHHHHHHTCC--------CCCCCCCCEET
T ss_pred ----CceEEEeeccchH-hHHHHHHH-HHH--------cCCCCCCHH----HHHHHHHcCC--------ccCcCCCCCCC
Confidence 6789988877654 57777742 222 222222222 2222222211 11222221111
Q ss_pred CCCCeeeEEE-------------EcHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHH
Q psy5911 291 KNGPKHLNVK-------------ITRSKLESLVE-DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSE 356 (1242)
Q Consensus 291 ~~~~~~~~~~-------------itr~~fe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~ 356 (1242)
.++++. .+..++-..++ -+++.+.+.+.++++..+ ++.|+|+||.+.-..+++.+.+
T Consensus 200 ----~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~ 270 (540)
T 3en9_A 200 ----MDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKA 270 (540)
T ss_dssp ----TEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHH
T ss_pred ----cceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHH
Confidence 111100 01222222121 233444555666666655 5689999999999999999998
Q ss_pred hc
Q psy5911 357 FF 358 (1242)
Q Consensus 357 ~f 358 (1242)
..
T Consensus 271 ~~ 272 (540)
T 3en9_A 271 MC 272 (540)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 136
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=80.16 E-value=2.2 Score=46.99 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=44.6
Q ss_pred HHHHHHHHHHcCCCeeeeechHHHHHHHhccC--CCCCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcc
Q psy5911 152 RQATKDAGKIAGLEVLRIINEPTAAALAYGLD--KKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG 229 (1242)
Q Consensus 152 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~--~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lG 229 (1242)
...+..+-+..|+++--+=.|-+|...+.+.. ........+|+|+|||+|.+++.+- +.+.. ...-.+|
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~------~~~~~---~~Sl~lG 162 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNK------NEILW---KQSFEIG 162 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECS------SCEEE---EEEESCC
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEEC------CeEee---eEEEech
Confidence 44455566678998754444555543333321 1112356888999999999999852 22211 1124578
Q ss_pred hHHHHHHH
Q psy5911 230 GEDFDMRI 237 (1242)
Q Consensus 230 G~~iD~~l 237 (1242)
.-.+.+.+
T Consensus 163 ~vrl~e~f 170 (315)
T 3mdq_A 163 GQRLIDRF 170 (315)
T ss_dssp HHHHHHHS
T ss_pred hhHHHHHh
Confidence 87766543
No 137
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=78.89 E-value=3 Score=46.51 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCeeeeechHHHHHHHh-cc--CCCC--CCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCC
Q psy5911 152 RQATKDAGKIAGLEVLRIINEPTAAALAY-GL--DKKP--DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDT 226 (1242)
Q Consensus 152 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~--~~~~--~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~ 226 (1242)
...+..+-+..|+++ .+|+-.+=|.+.| +. .... .....+|+|+|||+++++++.-....+.+.+. .....
T Consensus 105 ~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~Sl 180 (343)
T 3cer_A 105 EEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAFSM 180 (343)
T ss_dssp HHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEEEE
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeEEE
Confidence 345555556679976 5666555555444 32 1111 23458899999999999987530011101010 01123
Q ss_pred CcchHHHHHHH
Q psy5911 227 FLGGEDFDMRI 237 (1242)
Q Consensus 227 ~lGG~~iD~~l 237 (1242)
.+|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 57998877665
No 138
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=78.88 E-value=3.2 Score=46.28 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=44.9
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHc-cCC--CCC--CCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCC
Q psy5911 792 RQATKDAGKIAGLEVLRIINEPTAAALAY-GLD--KKP--DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDT 866 (1242)
Q Consensus 792 r~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~--~~~--~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~ 866 (1242)
...+..+-+..|+++ .+|+-.+=|.+.| +.. ... .....+|+|+|||+|+++++.-....+.+.+. .....
T Consensus 105 ~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~Sl 180 (343)
T 3cer_A 105 EEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAFSM 180 (343)
T ss_dssp HHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEEEE
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeEEE
Confidence 344556666779987 4555444444433 221 111 23458888999999999997531011101000 11224
Q ss_pred CCCchHHHHHH
Q psy5911 867 FLGGEDFDMRI 877 (1242)
Q Consensus 867 ~lGG~~~D~~l 877 (1242)
.+|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 57988777665
No 139
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=78.49 E-value=57 Score=35.77 Aligned_cols=87 Identities=21% Similarity=0.235 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHH----------------HHHHHHHHHHHcCCceeeeechhHHH
Q psy5911 753 PPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDS----------------QRQATKDAGKIAGLEVLRIINEPTAA 816 (1242)
Q Consensus 753 ~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~----------------qr~~~~~Aa~~AGl~~~~li~Ep~AA 816 (1242)
++++...+...+.+..... + .+..+.|++|...+.. -++.+.+ ..|++ +.+.|+..||
T Consensus 60 ~~~~~~~i~~~i~~~~~~~-~-~~~gigi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~---~~~~p-V~v~NDa~aa 133 (327)
T 4db3_A 60 YPLLLETIAGLVAKYDQEF-A-CEGKIGLGLPGMEDADDATVLTVNVPAAKGKPLRADLEA---KIGRS-VKIENDANCF 133 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHH-T-SCCEEEEEESEEECTTTCCEEESSSGGGTTSCHHHHHHH---HHSSC-CEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-C-CccEEEEEeeccEeCCCCEEEcCCCccccCCCHHHHHHH---HHCCC-EEEecchhHH
Confidence 5566555555554443332 2 2456777777654421 1333333 34776 6899999999
Q ss_pred HHHccCCC-CCCCcEEEEEeeCCCceEEEEE
Q psy5911 817 ALAYGLDK-KPDDRIIVVYDLGGGTFDISVI 846 (1242)
Q Consensus 817 al~y~~~~-~~~~~~vlV~D~GggT~dvsi~ 846 (1242)
|++-.... ....++++++-+|.| +-.+++
T Consensus 134 algE~~~g~~~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 134 ALSEAWDEELQDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HHHHHTSTTTTTCSEEEEEEESSS-EEEEEE
T ss_pred HHHHHHhCCCCCCCcEEEEEeCcc-ceEEEE
Confidence 99754332 234567777788877 555554
No 140
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=75.39 E-value=5.2 Score=47.27 Aligned_cols=74 Identities=23% Similarity=0.266 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCceeeeech-hHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCc
Q psy5911 792 RQATKDAGKIAGLEVLRIINE-PTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGG 870 (1242)
Q Consensus 792 r~~~~~Aa~~AGl~~~~li~E-p~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG 870 (1242)
...+.++-+..|+++ .+|+- -+|...+.|....-.....+|+|+|||+|.+++.+-.. + .......+|.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~------~---~~~~Sl~lG~ 172 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKS------C---GEGITLPLGG 172 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTE------E---CCCEEESCCH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCe------e---eeEEEecceE
Confidence 445666666789987 45554 44443333322211122348899999999999986221 1 1122345687
Q ss_pred hHHHH
Q psy5911 871 EDFDM 875 (1242)
Q Consensus 871 ~~~D~ 875 (1242)
-.+.+
T Consensus 173 vrl~e 177 (508)
T 3hi0_A 173 LRLSE 177 (508)
T ss_dssp HHHHH
T ss_pred Eehhh
Confidence 76664
No 141
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=74.54 E-value=4.8 Score=47.59 Aligned_cols=56 Identities=21% Similarity=0.295 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHcCCCeeeeechHHHHHHHh-ccCCCCCCcEEEEEEeCCcceeeeEEE
Q psy5911 151 QRQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKKPDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 151 qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
....+..+-+..|+++ .+|+-.+=|.+.| +....-.....+|+|+|||+|.+++.+
T Consensus 102 ~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 102 GPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp HHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee
Confidence 3455566666789986 5555554444443 322111122348999999999999986
No 142
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=72.35 E-value=23 Score=37.19 Aligned_cols=21 Identities=29% Similarity=0.553 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECCe
Q psy5911 4 KIIGIDLGTTNSCVAVLNNGK 24 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g~ 24 (1242)
..++||.|+|+++.+++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 478999999999999997553
No 143
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=71.22 E-value=1.1e+02 Score=32.63 Aligned_cols=48 Identities=23% Similarity=0.373 Sum_probs=36.4
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc-cccccCCcchhhhhhHHHhhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK-EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~-~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+++.|+|.||.+..+.+.+.+++.+.. ++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 467899999988778888888877743 555555 668899999987743
No 144
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=71.13 E-value=95 Score=33.79 Aligned_cols=88 Identities=19% Similarity=0.254 Sum_probs=52.6
Q ss_pred ChHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHH----------------HHHHHHHHHHcCCceeeeechhHH
Q psy5911 752 APPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQ----------------RQATKDAGKIAGLEVLRIINEPTA 815 (1242)
Q Consensus 752 ~~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q----------------r~~~~~Aa~~AGl~~~~li~Ep~A 815 (1242)
+++++...+...+.+.... .++..+.|++|...+... ++.+.+ ..|++ +.+.|+..|
T Consensus 36 ~~~~~~~~i~~~i~~~~~~---~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~---~~~~p-v~v~NDa~a 108 (321)
T 3vgl_A 36 TAEGIVDAICAAVAGASEG---HDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQ---RVGLP-VVVENDANA 108 (321)
T ss_dssp SHHHHHHHHHHHHHHHHTT---CCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHH---HHCSC-EEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh---cCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhh---hhCCC-EEEEehhhh
Confidence 3566666555555544322 356678888887654321 233333 34776 689999999
Q ss_pred HHHHccCC-CCCCCcEEEEEeeCCCceEEEEEE
Q psy5911 816 AALAYGLD-KKPDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 816 Aal~y~~~-~~~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
||++.... .....++++++-+|.| +-.+++.
T Consensus 109 aal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 109 AAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred HHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 99874322 1123455777788887 5566553
No 145
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=69.15 E-value=5.5 Score=47.17 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHH------HHHHHHHHHHcCCceeeeechhHHHHHHc-cCCCC-C
Q psy5911 755 QISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQ------RQATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-P 826 (1242)
Q Consensus 755 ~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q------r~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~ 826 (1242)
+.....+..|+.-.+..-...+.++.+ .-+..- ...+.++-+..|+++ .+|+-.+=|.+.| |.... +
T Consensus 60 eai~r~~~~L~~f~~~~~~~~v~~v~~----vATsA~R~A~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~ 134 (513)
T 1u6z_A 60 EAMTRGLNCLSLFAERLQGFSPASVCI----VGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQP 134 (513)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGEEE----EECHHHHHCTTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEE----EecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhcc
Confidence 344445555555444433334444322 123333 334455555679887 4555554444443 32111 1
Q ss_pred CCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCCchHHHHHH
Q psy5911 827 DDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGGEDFDMRI 877 (1242)
Q Consensus 827 ~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lGG~~~D~~l 877 (1242)
..+..+|+|+|||+|.+++.+- +.+. ......+|.-.+.+.+
T Consensus 135 ~~~~~lviDIGGGStEl~~~~~------~~~~---~~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 135 EKGRKLVIDIGGGSTELVIGEN------FEPI---LVESRRMGCVSFAQLY 176 (513)
T ss_dssp CCSCEEEEEECSSCEEEEEEET------TEEE---EEEEESCCHHHHHHHH
T ss_pred CCCCEEEEEECCCcEEEEEEeC------Ceee---EEEEEeccHHHHHHHH
Confidence 1225788899999999999742 2221 1223457988776665
No 146
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=66.35 E-value=5.4 Score=47.24 Aligned_cols=75 Identities=24% Similarity=0.350 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCCeeeeechHHHHHHHh-ccCCC-CCCcEEEEEEeCCcceeeeEEEEEeecCCceEEEEEecCCCCcch
Q psy5911 153 QATKDAGKIAGLEVLRIINEPTAAALAY-GLDKK-PDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLGG 230 (1242)
Q Consensus 153 ~~~~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~-~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~v~~~~~~~~lGG 230 (1242)
..+..+-+..|+++ .+|+-.+=|.+.| +.... ......+|+|+|||+|.+++.+ + +.+. . .....+|.
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~----~~~~--~-~~Sl~lG~ 169 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--N----FEPI--L-VESRRMGC 169 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--T----TEEE--E-EEEESCCH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--C----Ceee--E-EEEEeccH
Confidence 44444555669876 5666555555444 32111 1122578899999999999874 1 2221 1 11245799
Q ss_pred HHHHHHH
Q psy5911 231 EDFDMRI 237 (1242)
Q Consensus 231 ~~iD~~l 237 (1242)
..+.+.+
T Consensus 170 vrlte~f 176 (513)
T 1u6z_A 170 VSFAQLY 176 (513)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877665
No 147
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=65.97 E-value=11 Score=43.66 Aligned_cols=55 Identities=16% Similarity=0.056 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHcCCC--eeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEE
Q psy5911 150 SQRQATKDAGKIAGLE--VLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 150 ~qr~~~~~Aa~~AGl~--~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
.-++.+.++....|++ ++.++|+..|++++-.+ ....+++.+=+|.|+=-.-+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~---~~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNY---TDAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHH---HCTTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhh---cCCccEEEEEECcEEEEEEEEC
Confidence 4567777887666765 58999999999998665 2244566667888855444443
No 148
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=63.94 E-value=15 Score=40.68 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh---cccccccC---CcchhhhhhHHHhhhhhcc
Q psy5911 953 LISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQAGVLSG 1025 (1242)
Q Consensus 953 ~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~---~p~~aVa~GAa~~a~~l~~ 1025 (1242)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.+.+.+ |.++..+. --|.+++.|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445555666666554 578999999999999999999887 55555443 3578899999876544333
No 149
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=62.37 E-value=14 Score=40.85 Aligned_cols=63 Identities=14% Similarity=0.118 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh---cccccccC---CcchhhhhhHHHhhhh
Q psy5911 955 SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 955 ~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~---~p~~aVa~GAa~~a~~ 1022 (1242)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+ |.++..+. --|.+++.|+|.+...
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 334444455544433 578999999999999999999877 45555444 3467889998876543
No 150
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=60.32 E-value=1.3e+02 Score=33.72 Aligned_cols=45 Identities=16% Similarity=0.367 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhc
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 358 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 358 (1242)
++-++.++.+.|-..... + ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 310 ~d~f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 333444555544444332 2 4699999999999 9999999998765
No 151
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=56.92 E-value=21 Score=39.61 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhc-cccc----ccCCcchhhhhhHHHhhhh
Q psy5911 949 LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVK----KDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 949 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~v~----~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+..-+.+-+...|-+.++... ..++.|+++||+++.|.+.++|++.++ .++. ..++|+.-=|..-|++|..
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 334444444555555555433 136789999999999999999999984 4433 2334554445555666643
No 152
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=56.22 E-value=9 Score=36.19 Aligned_cols=22 Identities=27% Similarity=0.264 Sum_probs=19.2
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNG 23 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g 23 (1242)
++.++|||+|+..+.+|+.+..
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETT
T ss_pred CCeEEEEEeCCCEEEEEEEcCC
Confidence 4579999999999999998754
No 153
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=56.11 E-value=1.3e+02 Score=32.83 Aligned_cols=87 Identities=13% Similarity=0.155 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCCCCcEEEEecCCCCHHH----------------HHHHHHHHHHcCCceeeeechhHHH
Q psy5911 753 PPQISAEILKKMKSTAETFLNEKIEKAVITVPAYFNDSQ----------------RQATKDAGKIAGLEVLRIINEPTAA 816 (1242)
Q Consensus 753 ~~~v~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q----------------r~~~~~Aa~~AGl~~~~li~Ep~AA 816 (1242)
++++...+...+.+.... .+ .+..+.|++|...+... ++.+.+ ..|++ +.+.|+..||
T Consensus 60 ~~~~~~~i~~~i~~~~~~-~~-~i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~---~~~~p-v~v~NDa~aa 133 (327)
T 2ap1_A 60 YSAFLDAVCELVEEADQR-FG-VKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSA---RLDRD-VRLDNDANCF 133 (327)
T ss_dssp HHHHHHHHHHHHHHHHHH-HT-SCCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHH---HHTSC-EEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-cC-CccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHH---HHCCC-EEEecHHHHH
Confidence 455555444444433322 12 35568888887654321 122222 34666 6899999999
Q ss_pred HHHccCCC-CCCCcEEEEEeeCCCceEEEEE
Q psy5911 817 ALAYGLDK-KPDDRIIVVYDLGGGTFDISVI 846 (1242)
Q Consensus 817 al~y~~~~-~~~~~~vlV~D~GggT~dvsi~ 846 (1242)
|++..... ....+.++++-+|.| +-.+++
T Consensus 134 algE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 134 ALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 98743222 123457777788887 445554
No 154
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=56.09 E-value=63 Score=36.35 Aligned_cols=43 Identities=16% Similarity=0.320 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcceEEEecCcC-chHHHHHHHHhhh
Q psy5911 952 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 998 (1242)
Q Consensus 952 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 998 (1242)
=+..++.+.|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 312 ~f~yri~k~IGa~aa~L----ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 312 TFVHRIARHIAGHAASL----HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHTTC----SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHh----CCCCEEEECccccccCHHHHHHHHhhH
Confidence 33444554444443322 4599999999999 9999999998765
No 155
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=55.59 E-value=23 Score=42.66 Aligned_cols=64 Identities=13% Similarity=0.163 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc-ccccccC---CCcchhhHhHHHHhhhh
Q psy5911 314 ISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKKD---INPDEAVAVGASVQAGV 382 (1242)
Q Consensus 314 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~~~~~---~~p~~ava~GAa~~a~~ 382 (1242)
++.+.+.+.++.+..+ ++.|+|+||.+...++++.|.+.+ |.++..+ .--|-++|.|.|+.|+.
T Consensus 584 a~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 584 AQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3344444555555443 678999999999999999999987 6555432 33488999999988753
No 156
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=55.37 E-value=21 Score=43.96 Aligned_cols=63 Identities=17% Similarity=0.268 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc---ccccccC-CC--cchhhHhHHHHhhhhhc
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKD-IN--PDEAVAVGASVQAGVLS 384 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~-~~--p~~ava~GAa~~a~~l~ 384 (1242)
+.+.+.++.+..+ ++.|+|+||.+.-..+++.|.+.+ |.++..+ .- -|-++|+|.|++|+...
T Consensus 681 L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 681 TYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 3344444544444 578999999999999999998887 5554432 22 38899999999886544
No 157
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=54.99 E-value=24 Score=42.58 Aligned_cols=66 Identities=14% Similarity=0.161 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-cccccc---cCCcchhhhhhHHHhhhh
Q psy5911 952 DLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVKK---DINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 952 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~~---~~~p~~aVa~GAa~~a~~ 1022 (1242)
-+++.+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+ |.++.. ..--|-++|+|.|+.|+.
T Consensus 582 ala~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 582 ALAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 344555566666666554 578999999999999999999988 655543 234588999999998853
No 158
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=54.01 E-value=16 Score=45.25 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh---cccccccC---CcchhhhhhHHHhhhh
Q psy5911 957 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDI---NPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 957 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~---~p~~aVa~GAa~~a~~ 1022 (1242)
+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+ |.++..+. --|..+|.|+|++|+.
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 3445555555544 678999999999999999999887 44554432 2388899999988865
No 159
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=53.92 E-value=22 Score=43.77 Aligned_cols=64 Identities=17% Similarity=0.247 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh---ccccccc---CCcchhhhhhHHHhhhhhc
Q psy5911 956 KSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKD---INPDEAVAVGASVQAGVLS 1024 (1242)
Q Consensus 956 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~---~~p~~aVa~GAa~~a~~l~ 1024 (1242)
.+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+ |.++..+ .--|-++|+|.|++|+...
T Consensus 680 ~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 680 FTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 33444445554444 578999999999999999998887 4454432 2248899999999886543
No 160
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=53.07 E-value=17 Score=44.93 Aligned_cols=61 Identities=18% Similarity=0.278 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhc---ccccccCCC---cchhhHhHHHHhhhh
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDIN---PDEAVAVGASVQAGV 382 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~~~~~~~---p~~ava~GAa~~a~~ 382 (1242)
+.+.+.++.+..+ ++.|+|+||.+.-..+++.|.+.+ |.++..+.. -|..+|.|+|++|+.
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 3445555555443 678999999999999999999887 445554322 388899999988765
No 161
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=52.60 E-value=18 Score=40.30 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=25.7
Q ss_pred eeeechhHHHHHH-----ccCCC--CCCCcEEEEEeeCCCceEEEEEE
Q psy5911 807 LRIINEPTAAALA-----YGLDK--KPDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 807 ~~li~Ep~AAal~-----y~~~~--~~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
+++|+-.+=|.+. |.... ....++++|+|+|||++.++...
T Consensus 111 v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 111 AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 4566555444443 33332 12334689999999999999873
No 162
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=51.89 E-value=1.9e+02 Score=34.00 Aligned_cols=59 Identities=19% Similarity=0.207 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh---cccccccCC---cchhhhhhHH
Q psy5911 954 ISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF---EKEVKKDIN---PDEAVAVGAS 1017 (1242)
Q Consensus 954 ~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f---~~~v~~~~~---p~~aVa~GAa 1017 (1242)
++.+.+.+.++++..+ ++.|+|+||-+....+++.+.+.. |.++..+.. .|-++..|.+
T Consensus 233 ~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 233 FSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHH
Confidence 3444455566666554 578999999999999999999876 344443321 3445555543
No 163
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=51.60 E-value=8.9 Score=33.80 Aligned_cols=20 Identities=25% Similarity=0.439 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q psy5911 4 KIIGIDLGTTNSCVAVLNNG 23 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~g 23 (1242)
.++|||+|+..+.+|+.+..
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 48999999999999997643
No 164
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=51.19 E-value=94 Score=34.88 Aligned_cols=46 Identities=11% Similarity=-0.002 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhc
Q psy5911 309 LVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 358 (1242)
Q Consensus 309 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 358 (1242)
.++-+..++.+.|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34444556665555554443 3599999999999 9999999998665
No 165
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=49.92 E-value=35 Score=37.88 Aligned_cols=70 Identities=10% Similarity=0.150 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhh-ccccc----ccCCcchhhhhhHHHhhh
Q psy5911 948 SLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFF-EKEVK----KDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 948 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f-~~~v~----~~~~p~~aVa~GAa~~a~ 1021 (1242)
.+..-+.+-+...|-+.+.... ..+.|+++||+++.|.+.++|++.+ +.++. ..++|+.-=|..-|++|.
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~ 341 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHH
Confidence 4445555555566666665542 3568999999999999999999999 33432 233444433444455554
No 166
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=49.01 E-value=22 Score=39.51 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=26.0
Q ss_pred eeeechHHHHHHHh-----ccCC--CCCCcEEEEEEeCCcceeeeEE
Q psy5911 167 LRIINEPTAAALAY-----GLDK--KPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 167 ~~li~Ep~AAal~y-----~~~~--~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
+++|+-.+=|.+.| .... ....++++|+|+|||++.++..
T Consensus 111 v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 111 AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEE
T ss_pred EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEe
Confidence 46666554444443 3322 1234568999999999999986
No 167
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=48.59 E-value=28 Score=41.21 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhccc-ccccC-CCcchhhHhHHHHh
Q psy5911 303 RSKLESLVEDLI-SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK-EVKKD-INPDEAVAVGASVQ 379 (1242)
Q Consensus 303 r~~fe~l~~~~~-~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~~~~~-~~p~~ava~GAa~~ 379 (1242)
..++-..++..+ +-+.+.+..+.+..+ ++.|+|.||.+.-..+++.|.+..+. .+..+ .--|.++++|+|.+
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 344444444333 334455556665554 67899999999999999999876553 33333 23478999999999
Q ss_pred hhhhcC
Q psy5911 380 AGVLSG 385 (1242)
Q Consensus 380 a~~l~~ 385 (1242)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876544
No 168
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=47.69 E-value=3.1e+02 Score=29.85 Aligned_cols=83 Identities=8% Similarity=-0.031 Sum_probs=51.6
Q ss_pred ChHHHHHHHHHHHHHHHHhHh--CC-CCCcEEEEecCCCCHHHHHHHHHHHHHc-C--CceeeeechhHHHHHHccCCCC
Q psy5911 752 APPQISAEILKKMKSTAETFL--NE-KIEKAVITVPAYFNDSQRQATKDAGKIA-G--LEVLRIINEPTAAALAYGLDKK 825 (1242)
Q Consensus 752 ~~~~v~a~~L~~l~~~a~~~~--~~-~~~~~VitVPa~~~~~qr~~~~~Aa~~A-G--l~~~~li~Ep~AAal~y~~~~~ 825 (1242)
.++++...+...+.+.....- .. ++..+.|++|...+......+++..+.. | .-.+.+.|+..|||+++ ..
T Consensus 44 ~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~~-- 120 (347)
T 2ch5_A 44 GTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-TP-- 120 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-CS--
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-CC--
Confidence 355666655555555443321 12 4678999999999877666666655543 4 13568999999999984 31
Q ss_pred CCCcEEEEEeeCCCc
Q psy5911 826 PDDRIIVVYDLGGGT 840 (1242)
Q Consensus 826 ~~~~~vlV~D~GggT 840 (1242)
..++++-+|.|.
T Consensus 121 ---~~~v~v~~GTGi 132 (347)
T 2ch5_A 121 ---DGGVVLISGTGS 132 (347)
T ss_dssp ---SCEEEEEESSSE
T ss_pred ---CCcEEEEEcCCc
Confidence 234444556654
No 169
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=45.67 E-value=39 Score=39.00 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=0.0
Q ss_pred CeEEEEEcCccceEEEEEECCe-EEEEeCCCCCcccceEEEEecCCcEEEcHHHHHhhhhCCCchhhhchhhhCCCCCCh
Q psy5911 3 CKIIGIDLGTTNSCVAVLNNGK-PQVIENSEGGRTTPSVVGYTEDNRIIVGLPAKRQAITNPNNTLYAIKRLIGRKYTDE 81 (1242)
Q Consensus 3 ~~vvGID~GTt~s~va~~~~g~-~~ii~~~~g~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 81 (1242)
..++|||||.||..|+.++-+. -..+........+|+
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~------------------------------------------ 105 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPA------------------------------------------ 105 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCT------------------------------------------
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCC------------------------------------------
Q ss_pred HHHHHhccCCeEEEecCCCCeEEEEcCeecChHHHHHHHHHHHHHHHHhHhcCC----------------------CCcE
Q psy5911 82 IVQTVLKMVPYKIVAADNGDAWVEVKDKKLAPPQISAEILKKMKSTAETFLNEK----------------------IEKA 139 (1242)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~L~~l~~~a~~~~~~~----------------------~~~~ 139 (1242)
.-..-+.+++...+...+.+..+..-... +..|
T Consensus 106 -------------------------~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~~~lG~tfsfPv~q~~~~~G~l~~w 160 (451)
T 1bdg_A 106 -------------------------EKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQKGLTHATLVRW 160 (451)
T ss_dssp -------------------------TTTTSBHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEEEETTTEEEECCC
T ss_pred -------------------------cccCCCHHHHHHHHHHHHHHHHHhcCCCccccceEEEEeeEeccccCCCeEEecc
Q ss_pred E--EEecCCCCHHHHHHHHHHHHHcCCCe--eeeechHHHHHHHhccCCCCCCcEEEEEEeCCcc
Q psy5911 140 V--ITVPAYFNDSQRQATKDAGKIAGLEV--LRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGT 200 (1242)
Q Consensus 140 v--itVPa~f~~~qr~~~~~Aa~~AGl~~--~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT 200 (1242)
. +.+|..-...-.+.+.+|...-|+++ +.++|+.+|++++..+. ....++-+=+|.|+
T Consensus 161 tKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~---~~~~~iglIlGTG~ 222 (451)
T 1bdg_A 161 TKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALE---DPKCAVGLIVGTGT 222 (451)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTT---CTTEEEEEEESSSE
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhccc---CCCcEEEEEEeCCc
No 170
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=41.61 E-value=54 Score=36.36 Aligned_cols=60 Identities=20% Similarity=0.193 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc-ccccc----C--CCcchhhHhHHHHhhh
Q psy5911 317 SLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVKK----D--INPDEAVAVGASVQAG 381 (1242)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~~~~----~--~~p~~ava~GAa~~a~ 381 (1242)
+...|-+.++... ..++.|+++||+++-|.+.++|++.++ .++.. . .+..||+|. |++|.
T Consensus 269 TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aF--A~LA~ 335 (371)
T 3qbx_A 269 SARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAF--AWLAH 335 (371)
T ss_dssp HHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHH--HHHHH
T ss_pred HHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHH--HHHHH
Confidence 3334444444332 136789999999999999999999984 44332 2 344455554 55554
No 171
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=40.97 E-value=39 Score=40.00 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHHhhhcc-ccccc-CCcchhhhhhHHHh
Q psy5911 943 RSKLESLVEDLI-SKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFEK-EVKKD-INPDEAVAVGASVQ 1019 (1242)
Q Consensus 943 r~~fe~~~~~~~-~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~~-~v~~~-~~p~~aVa~GAa~~ 1019 (1242)
..++-..++..+ +-+.+.+..+.+..+ ++.|.|.||.+....+++.+.+..+. .+..+ .--|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 344443333333 334455555555544 67899999999999999999876553 33333 34578999999999
Q ss_pred hhhhcc
Q psy5911 1020 AGVLSG 1025 (1242)
Q Consensus 1020 a~~l~~ 1025 (1242)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876654
No 172
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=39.15 E-value=79 Score=28.62 Aligned_cols=36 Identities=6% Similarity=0.102 Sum_probs=22.0
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhhh
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEMF 591 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~a 591 (1242)
..+.|...++.+.+.++-++++ ++..-.++||||++
T Consensus 69 yk~~y~~l~k~Y~~~~keLd~~------------ik~qekiIdnFE~i 104 (119)
T 3etw_A 69 YKSQYQELASKYEDALKKLEAE------------MEQQKAVISDFEKI 104 (119)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
Confidence 3455666666666655544433 34555678999986
No 173
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=38.77 E-value=17 Score=34.88 Aligned_cols=19 Identities=42% Similarity=0.733 Sum_probs=16.9
Q ss_pred eEEEEEcCccceEEEEEEC
Q psy5911 4 KIIGIDLGTTNSCVAVLNN 22 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~~ 22 (1242)
.++|||+|+..+.+|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 4899999999999999764
No 174
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=38.53 E-value=19 Score=38.19 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=19.2
Q ss_pred CCeEEEEEcCccceEEEEEECCe
Q psy5911 2 YCKIIGIDLGTTNSCVAVLNNGK 24 (1242)
Q Consensus 2 ~~~vvGID~GTt~s~va~~~~g~ 24 (1242)
|..+++||+|.|+++.+++++++
T Consensus 1 M~MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 1 MSLILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp --CEEEEEECSSEEEEEEEETTE
T ss_pred CceEEEEEECCCeEEEEEEECCE
Confidence 45789999999999999998764
No 175
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=38.05 E-value=78 Score=34.50 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=33.4
Q ss_pred CcceEEEecCcCch-HHHHHHHHhhhc----------ccccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRM-PLVQKMVSEFFE----------KEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~i-p~v~~~l~~~f~----------~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.++. +.+.+.+++.+. .++....-.+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 46789999998876 666666655442 1344455567899999998763
No 176
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=36.70 E-value=51 Score=37.99 Aligned_cols=43 Identities=21% Similarity=0.353 Sum_probs=28.9
Q ss_pred CeeeeechHHHHHHHh-----ccCCC-----------CCCcEEEEEEeCCcceeeeEEE
Q psy5911 165 EVLRIINEPTAAALAY-----GLDKK-----------PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 165 ~~~~li~Ep~AAal~y-----~~~~~-----------~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
..+++|+-.+=|.+.| .+..- +....++|+|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 4568888766665554 22211 1245688899999999999874
No 177
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=36.08 E-value=66 Score=34.66 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=35.7
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc------cccccCCcchhhhhhHHHhhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+++.|+|.||.+..|.+.+.+++.+.. ++....-.+.+.++|||.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 467899999999877777777776632 2344455677999999987753
No 178
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=35.74 E-value=82 Score=33.68 Aligned_cols=48 Identities=21% Similarity=0.070 Sum_probs=31.9
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhc------------ccccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFE------------KEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~------------~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.+..|.+.+.+++.+. .++....-.+.+.++|||.++.
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 35789999998876766666665542 1222333456789999998764
No 179
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=35.67 E-value=93 Score=28.03 Aligned_cols=35 Identities=6% Similarity=0.125 Sum_probs=21.0
Q ss_pred HHHHHhhhHHHhhccchhhHHHHHHHHHHHHHHHHHHhhcchhhhhh
Q psy5911 544 LEEKFCSFVLETKKETDYDEDKIRKLKEIVIENIIIELIPITDSMEM 590 (1242)
Q Consensus 544 ~~~~~~~~~a~~~n~~kr~~~~~~~~~~~~~~~~~~~ll~v~d~~e~ 590 (1242)
.++.|..++..+..+++.+++++. +.-.++|||+.
T Consensus 69 yK~eY~~L~KkYk~~~~~Ld~eI~------------~qe~iI~nFe~ 103 (119)
T 2avr_X 69 YKSQYQELASKYEDALKKLEAEME------------QQKAVISDFEK 103 (119)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHH
Confidence 456666666666666665555554 33446777765
No 180
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=35.51 E-value=37 Score=32.74 Aligned_cols=18 Identities=33% Similarity=0.534 Sum_probs=16.4
Q ss_pred eEEEEEcCccceEEEEEE
Q psy5911 4 KIIGIDLGTTNSCVAVLN 21 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~ 21 (1242)
.|+|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999985
No 181
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=34.86 E-value=1e+02 Score=33.42 Aligned_cols=49 Identities=20% Similarity=0.319 Sum_probs=33.2
Q ss_pred CcceEEEecCcCc-hHHHHHHHHhhhcc----------cccccCCcchhhhhhHHHhhhh
Q psy5911 974 KISEIILVGGQTR-MPLVQKMVSEFFEK----------EVKKDINPDEAVAVGASVQAGV 1022 (1242)
Q Consensus 974 ~i~~ViLvGG~s~-ip~v~~~l~~~f~~----------~v~~~~~p~~aVa~GAa~~a~~ 1022 (1242)
+++.|+|.||.+. .|.+.+.+++.+.. ++....-.+.+.++|||.++..
T Consensus 262 ~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 262 NPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 3568999999886 57777777665521 2333345667899999988754
No 182
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=34.74 E-value=89 Score=34.65 Aligned_cols=66 Identities=12% Similarity=0.125 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHHHhcc-cccc------cCCCcchhhHhHHHHhhh
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVSEFFE-KEVK------KDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~~~f~-~~~~------~~~~p~~ava~GAa~~a~ 381 (1242)
..-+.+=+...|-+.++... ..+.|+++||+++-|.+.++|++.++ .++. .+.+..||+|. |++|.
T Consensus 269 ~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA~ 341 (370)
T 3cqy_A 269 QSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHHH
Confidence 33333434444555554432 35689999999999999999999983 3432 23345566665 44443
No 183
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=33.71 E-value=95 Score=35.56 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHHhHhc---CCCCcEEEEecCCCC------HHHHHHHHHHHHHc----CC--CeeeeechHHHHH
Q psy5911 113 PPQISAEILKKMKSTAETFLN---EKIEKAVITVPAYFN------DSQRQATKDAGKIA----GL--EVLRIINEPTAAA 177 (1242)
Q Consensus 113 ~~~v~a~~L~~l~~~a~~~~~---~~~~~~vitVPa~f~------~~qr~~~~~Aa~~A----Gl--~~~~li~Ep~AAa 177 (1242)
|+.+ +..|+.|.+.|...+. ...+.+.+---|..- ..+++.+.++++.. ++ ..+++|+-.+=+.
T Consensus 84 p~~~-~~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~ 162 (452)
T 3zx3_A 84 TDEI-AAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGA 162 (452)
T ss_dssp GGGH-HHHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhh
Confidence 3444 3567777777775432 123445554444442 12344554444432 44 3578888666555
Q ss_pred HHh-----ccCCC--CCCcEEEEEEeCCcceeeeEEE
Q psy5911 178 LAY-----GLDKK--PDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 178 l~y-----~~~~~--~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
++| .+..- +...++.++|+|||++.++...
T Consensus 163 y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 163 YGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred hhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 544 33221 1235678889999999998653
No 184
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=33.42 E-value=78 Score=34.06 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=34.5
Q ss_pred CcceEEEecCccChHHHHHHHHHhccc------ccccCCCcchhhHhHHHHhhhh
Q psy5911 334 KISEIILVGGQTRMPLVQKMVSEFFEK------EVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~v~~~l~~~f~~------~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
+++.|+|.||.+..|.+.+.|++.+.. ++......+.+.++|||..+..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 367899999988877666666666531 3344555678999999987643
No 185
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=33.26 E-value=99 Score=33.00 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=28.9
Q ss_pred HcCCCeeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEE
Q psy5911 161 IAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 161 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
..|++ +.+.|+..|||++... .....++++++-+|.| +-.+++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~-~~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELL-AHPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHH-HCTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHH-hcCCCCeEEEEEECCc-eEEEEE
Confidence 45765 6899999999998543 2223456777788887 445544
No 186
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=32.74 E-value=2.6e+02 Score=31.27 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCcc-ChHHHHHHHHHhc
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQT-RMPLVQKMVSEFF 358 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~ip~v~~~l~~~f 358 (1242)
++-+..++.+.|-......+ .+|.|+++||-+ +.+.+++.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l 347 (403)
T 2iir_A 302 LEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYL 347 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhh
Confidence 34445555555555544433 489999999999 9999999998776
No 187
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=32.43 E-value=56 Score=34.97 Aligned_cols=47 Identities=13% Similarity=0.161 Sum_probs=32.3
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcc-------cccccCCcchhhhhhHHHhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEK-------EVKKDINPDEAVAVGASVQA 1020 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~-------~v~~~~~p~~aVa~GAa~~a 1020 (1242)
+++.|+|.||.+..+.+.+.+++.+.. ++....-.+.+.++|||.++
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 356799999887667777777766632 22334445678999999875
No 188
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=32.07 E-value=26 Score=37.79 Aligned_cols=68 Identities=9% Similarity=-0.076 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcc-CcceEEEecCcCch--HHHHHHHHhhhcccccccCCcchhhhhhHHHhhhhh
Q psy5911 949 LVEDLISKSLKPCEVALNDAKIDKS-KISEIILVGGQTRM--PLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGVL 1023 (1242)
Q Consensus 949 ~~~~~~~~~~~~i~~~l~~~~~~~~-~i~~ViLvGG~s~i--p~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~~l 1023 (1242)
....++++..+.+-..+ . +... +++.|+|.||.+.. +.+++.+++.. .....|..+...||+.++...
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~----~~i~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG----LTLGSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT----CCEEEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC----CeecccCcCHHHHHHHHHHhh
Confidence 34455555555555555 2 2222 57789999998876 55666555432 112335688999999988543
No 189
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=31.14 E-value=29 Score=37.81 Aligned_cols=39 Identities=18% Similarity=0.109 Sum_probs=25.7
Q ss_pred eeeeechHHHHHHHhccCCCCCCcEEEEEEeCCcceeeeEEE
Q psy5911 166 VLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE 207 (1242)
Q Consensus 166 ~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~Dvsv~~ 207 (1242)
+-....-|.|.|...+... .+ ..+++|+||.|||+..+.
T Consensus 107 ~~~aaanw~ASa~~~A~~~--~~-~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 107 MKVSASNWCGTAKWVSKNI--EE-NCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGTBCCSSHHHHHHHHHHT--CS-SEEEEEECSSCEEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHhc--CC-CEEEEEcCcchhhhhhhc
Confidence 3445566777776433321 12 356779999999999887
No 190
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=29.91 E-value=67 Score=36.99 Aligned_cols=43 Identities=21% Similarity=0.353 Sum_probs=28.1
Q ss_pred ceeeeechhHHHHHHc-----cCCCC-----------CCCcEEEEEeeCCCceEEEEEE
Q psy5911 805 EVLRIINEPTAAALAY-----GLDKK-----------PDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 805 ~~~~li~Ep~AAal~y-----~~~~~-----------~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
..+++|+-.+=|.+.| .+..- +....++|+|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 3567887665555544 22211 1245688899999999999874
No 191
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=29.80 E-value=68 Score=34.28 Aligned_cols=46 Identities=13% Similarity=0.161 Sum_probs=31.2
Q ss_pred cceEEEecCccChHHHHHHHHHhccc-------ccccCCCcchhhHhHHHHhh
Q psy5911 335 ISEIILVGGQTRMPLVQKMVSEFFEK-------EVKKDINPDEAVAVGASVQA 380 (1242)
Q Consensus 335 i~~ViLvGG~s~ip~v~~~l~~~f~~-------~~~~~~~p~~ava~GAa~~a 380 (1242)
++.|+|.||.+..+.+.+.+++.+.. ++......+.+.++|||..+
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 56789999887667676667665532 23334455678999998875
No 192
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=27.47 E-value=99 Score=29.47 Aligned_cols=92 Identities=14% Similarity=0.172 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHhhhHhhHhhHHHHHh----------------hh---hHHHHHHHHHHhhhhccCCCC--HHHHHHH
Q psy5911 1148 LSEIEIENMIKDAELNSELDKKFEELVKC----------------KN---EADSTISIVKKNLKDENTKIT--DEEKESI 1206 (1242)
Q Consensus 1148 l~~~e~~~~~~~~~~~~~~d~~~~~~~~~----------------~n---~le~~~~~~~~~l~~~~~~~~--~~~~~~~ 1206 (1242)
...+++-+...++++-.-.|...|++... +. .|..-+......|.+|...+. -++|.++
T Consensus 22 ~~~~elik~L~~le~sassDa~vrq~Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L 101 (152)
T 4fla_A 22 LLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQL 101 (152)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhccccchHHHHHHHHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666777767777766555422 11 222222222233333222221 2467777
Q ss_pred HHHHHHHHHHHhcC------CHHHHHHHHHHHHHHHHHH
Q psy5911 1207 EKSISNLELLIKGD------DIELIKKGNEDLLKISENI 1239 (1242)
Q Consensus 1207 ~~~~~~~~~wl~~~------~~~~~~~~~~~l~~~~~~~ 1239 (1242)
...|.+........ ..++|+.++.++......+
T Consensus 102 ~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL 140 (152)
T 4fla_A 102 ARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKEL 140 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777665543 3567777777777665543
No 193
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=27.06 E-value=46 Score=36.04 Aligned_cols=63 Identities=13% Similarity=0.127 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCc--hHHHHHHHHhhhcccccccCCcchhhhhhHHHhhh
Q psy5911 950 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTR--MPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 950 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+..++++....+-..+...-. . +++.|+|.||.+. .|.+.+.+++.+ ..|+.+.+.||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHh
Confidence 445555555555555554332 2 6788999999764 456666665542 2256788999999874
No 194
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=26.95 E-value=1.1e+02 Score=32.88 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=31.1
Q ss_pred CcceEEEecCcC-ch-HHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQT-RM-PLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s-~i-p~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.+ .. |.+.+.+++.+.. ++..+.-.+.+.++|||.++.
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 467899999877 43 5555555554421 233344557789999998764
No 195
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=26.27 E-value=32 Score=37.07 Aligned_cols=66 Identities=9% Similarity=-0.029 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcC-CcceEEEecCccCh--HHHHHHHHHhcccccccCCCcchhhHhHHHHhhhh
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKS-KISEIILVGGQTRM--PLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAGV 382 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~s~i--p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 382 (1242)
...++++..+.+-..+ . +... +++.|+|.||-+.. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 212 A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 4445555555555555 2 2222 56789999998876 66666665543 122 23567889999998754
No 196
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=26.22 E-value=85 Score=35.97 Aligned_cols=42 Identities=26% Similarity=0.410 Sum_probs=26.5
Q ss_pred eeeeechhHHHHHH-----ccCCCC--CCCcEEEEEeeCCCceEEEEEE
Q psy5911 806 VLRIINEPTAAALA-----YGLDKK--PDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 806 ~~~li~Ep~AAal~-----y~~~~~--~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
.+++|+-.+=|.++ |.+..- +....+.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 46777765554443 333321 1235678889999999998764
No 197
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=26.12 E-value=41 Score=32.73 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=16.4
Q ss_pred eEEEEEcCccceEEEEEE
Q psy5911 4 KIIGIDLGTTNSCVAVLN 21 (1242)
Q Consensus 4 ~vvGID~GTt~s~va~~~ 21 (1242)
.|+|||.|++++..++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 589999999999999975
No 198
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=24.45 E-value=1.1e+02 Score=34.32 Aligned_cols=48 Identities=19% Similarity=0.164 Sum_probs=32.7
Q ss_pred CcceEEEecCcCchHH-HHHHHHhhhcc----cccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRMPL-VQKMVSEFFEK----EVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~-v~~~l~~~f~~----~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.+..+. +.+.+++.+.. .+........+.+.||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999887543 77777777632 223233334589999998764
No 199
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=24.41 E-value=89 Score=37.39 Aligned_cols=57 Identities=14% Similarity=0.306 Sum_probs=44.2
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCchHHHHHHHH
Q psy5911 938 NVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVS 995 (1242)
Q Consensus 938 ~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~ 995 (1242)
.+.||..+++++.. .-..+..-++-.|+.++++.++|+.|+|.||+..-=-+.+.+.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 47899999998533 2344566677888999999999999999999988655555553
No 200
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=23.79 E-value=1.6e+02 Score=31.81 Aligned_cols=48 Identities=23% Similarity=0.302 Sum_probs=32.8
Q ss_pred CcceEEEecCcCch-----HHHHHHHHhhhcc-------cccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRM-----PLVQKMVSEFFEK-------EVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~i-----p~v~~~l~~~f~~-------~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|-||.+.. +.+++.+++.+.. ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 57889999998765 4577777766521 223333456889999998774
No 201
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=23.15 E-value=1.3e+02 Score=33.81 Aligned_cols=48 Identities=19% Similarity=0.164 Sum_probs=32.0
Q ss_pred CcceEEEecCccChHH-HHHHHHHhccc----ccccCCCcchhhHhHHHHhhh
Q psy5911 334 KISEIILVGGQTRMPL-VQKMVSEFFEK----EVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 334 ~i~~ViLvGG~s~ip~-v~~~l~~~f~~----~~~~~~~p~~ava~GAa~~a~ 381 (1242)
+++.|+|.||.+..+. +.+.+++.+.. .+........+.+.||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999886543 66777766632 222233334689999988763
No 202
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=22.90 E-value=2.1e+02 Score=30.65 Aligned_cols=43 Identities=19% Similarity=0.161 Sum_probs=27.2
Q ss_pred cCCceeeeechhHHHHHHccCC-CCCCCcEEEEEeeCCCceEEEEE
Q psy5911 802 AGLEVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVI 846 (1242)
Q Consensus 802 AGl~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~dvsi~ 846 (1242)
.|++ +.+.|+..|||++-... ..+..++++++-+|.| +-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 4776 58999999999874322 1223455677777765 444444
No 203
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=22.85 E-value=58 Score=35.24 Aligned_cols=63 Identities=13% Similarity=0.127 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccC--hHHHHHHHHHhcccccccCCCcchhhHhHHHHhhh
Q psy5911 310 VEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTR--MPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--ip~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 381 (1242)
+..++++....+-..+...-. . +.+.|+|.||.+. .|.+.+.+++.+ ..|+.+.+.||++++.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHh
Confidence 444555555555555544332 2 5778999999764 455555555542 1256778999998874
No 204
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.73 E-value=44 Score=36.44 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=25.2
Q ss_pred eeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEE
Q psy5911 806 VLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIE 847 (1242)
Q Consensus 806 ~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~ 847 (1242)
+.....-|.|.|...+... .+. .+++|+||.|||+..+.
T Consensus 107 ~~~aaanw~ASa~~~A~~~--~~~-~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 107 MKVSASNWCGTAKWVSKNI--EEN-CILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGTBCCSSHHHHHHHHHHT--CSS-EEEEEECSSCEEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHhc--CCC-EEEEEcCcchhhhhhhc
Confidence 3345566767666433321 122 56669999999999887
No 205
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=22.27 E-value=73 Score=27.05 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=26.2
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHcCCce
Q psy5911 778 KAVITVPAYFNDSQRQATKDAGKIAGLEV 806 (1242)
Q Consensus 778 ~~VitVPa~~~~~qr~~~~~Aa~~AGl~~ 806 (1242)
+-.++.|+.++..+|..+.+.|+..||.-
T Consensus 33 ~~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 33 KMQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp CSEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred CcEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 35789999999999999999999999865
No 206
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=22.21 E-value=4.7e+02 Score=29.05 Aligned_cols=157 Identities=17% Similarity=0.091 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCceeeeechhHHHHHHccCCCCCCCcEEEEEeeCCCceEEEEEEEeecCCCceEEEEEecCCCCCC
Q psy5911 790 SQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKPDDRIIVVYDLGGGTFDISVIEIANVDGETQFEVLSTNGDTFLG 869 (1242)
Q Consensus 790 ~qr~~~~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~~~~~v~~~~~~~~lG 869 (1242)
.++-..+++++..|-+. .+.+++++-+|+| ..++.++ +--.+-.+.|-+.+.
T Consensus 176 S~~yva~r~a~~lgk~~--------------------~~~~lIv~HLGnG-aSv~Ai~-------~GksvDtsmG~tple 227 (391)
T 3r9p_A 176 SHRYVSEQAAAFLDRPL--------------------RGLKQIVLHLGNG-CSASAIA-------GTRPLDTSMGLTPLE 227 (391)
T ss_dssp HHHHHHHHHHHHTTSCG--------------------GGCEEEEEEESSS-EEEEEEE-------TTEEEEESCCSSTTS
T ss_pred hHHHHHHHHHHHhCCCh--------------------HHcCEEEEEeCCC-cEeEEEE-------CCEEEeeCCCCCccc
Q ss_pred c-------hHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHhhhhccCCceeeEEeccccccCCCCeeeEEEEc
Q psy5911 870 G-------EDFDMRIINHLIYEFKIENGVDLSGDSLAMQRLKEAAEKAKIELSNAEQTDINLPYITADKNGPKHLNVKIT 942 (1242)
Q Consensus 870 G-------~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~it 942 (1242)
| -++|-.++-|+..+.+ -+...+.+++..--=.+ .+|.. ..--.+.......+
T Consensus 228 Gl~mgtRsGdiDp~~l~~l~~~~g--------~s~~ei~~~Lnk~SGLl-glsG~-~D~R~v~~~~~~gd---------- 287 (391)
T 3r9p_A 228 GLVMGTRSGDIDPSIVSYLCHTAG--------MGVDDVESMLNHRSGVV-GLSGV-RDFRRLRELIESGD---------- 287 (391)
T ss_dssp SSCCSSCCCSCCTHHHHHHHHHSC--------CCHHHHHHHHHHSCHHH-HHHSC-SCSHHHHHHHHTTC----------
T ss_pred CCCCCCCCCCCChHHHHHHHHhcC--------CCHHHHHHHHHhccCce-eecCC-CCHHHHHHHHHCCC----------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCcceEEEecCcCc-hHHHHHHHHhhhc
Q psy5911 943 RSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTR-MPLVQKMVSEFFE 999 (1242)
Q Consensus 943 r~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~-ip~v~~~l~~~f~ 999 (1242)
++-...++-+..++.+.|-......+ .+|.|+++||-+. .+.+++.+.+.++
T Consensus 288 -~~A~lA~d~f~yri~k~Iga~aa~Lg----~vDaIVfTGGIgens~~vR~~i~~~l~ 340 (391)
T 3r9p_A 288 -GAAQLAYSVFTHRLRKYIGAYLAVLG----HTDVISFTAGIGENDAAVRRDAVSGME 340 (391)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHHHHH
No 207
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=22.20 E-value=2e+02 Score=31.02 Aligned_cols=48 Identities=23% Similarity=0.302 Sum_probs=32.8
Q ss_pred CcceEEEecCccCh-----HHHHHHHHHhccc-------ccccCCCcchhhHhHHHHhhh
Q psy5911 334 KISEIILVGGQTRM-----PLVQKMVSEFFEK-------EVKKDINPDEAVAVGASVQAG 381 (1242)
Q Consensus 334 ~i~~ViLvGG~s~i-----p~v~~~l~~~f~~-------~~~~~~~p~~ava~GAa~~a~ 381 (1242)
+++.|+|-||.+.. +.+++.+++.+.. ++....-.+.+.++|||..+.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 46789999998765 4677777766521 223334456889999998764
No 208
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=21.69 E-value=2e+02 Score=32.10 Aligned_cols=48 Identities=23% Similarity=0.209 Sum_probs=31.8
Q ss_pred CcceEEEecCcCch-HHHHHHHHhhhcc--------cccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRM-PLVQKMVSEFFEK--------EVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~i-p~v~~~l~~~f~~--------~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.+.. |.+.+.+++.+.. ++....-.+.+.+.|||.++.
T Consensus 314 dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 314 GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 36789999998864 6676777665521 223333455689999998763
No 209
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=21.48 E-value=1.4e+02 Score=35.85 Aligned_cols=57 Identities=14% Similarity=0.306 Sum_probs=44.7
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCccChHHHHHHHH
Q psy5911 298 NVKITRSKLESLVEDLISKSLKPCEVALNDAKIDKSKISEIILVGGQTRMPLVQKMVS 355 (1242)
Q Consensus 298 ~~~itr~~fe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ip~v~~~l~ 355 (1242)
.+.||..+++++.. .-.-+..-++-.|++++++.++|+.|+|.||+..---+.+.+.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 47899999998543 2345566788889999999999999999999988655555543
No 210
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=20.75 E-value=1.1e+02 Score=34.17 Aligned_cols=49 Identities=29% Similarity=0.392 Sum_probs=38.3
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHcCCCeeeeechHHH-HHHHhccCCC
Q psy5911 136 IEKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTA-AALAYGLDKK 185 (1242)
Q Consensus 136 ~~~~vitVPa~f~~~qr~~~~~Aa~~AGl~~~~li~Ep~A-Aal~y~~~~~ 185 (1242)
+.++|++.|.. +..---.+.-||..+|.+.+.-+--..| ||++||...-
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI 209 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETV 209 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSS
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcc
Confidence 67889999983 2222346889999999999999988888 6799988654
No 211
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=20.49 E-value=28 Score=37.60 Aligned_cols=46 Identities=7% Similarity=-0.039 Sum_probs=30.4
Q ss_pred CcceEEEecCcCchHHHHHHHHhhhcccccccCCcchhhhhhHHHhhh
Q psy5911 974 KISEIILVGGQTRMPLVQKMVSEFFEKEVKKDINPDEAVAVGASVQAG 1021 (1242)
Q Consensus 974 ~i~~ViLvGG~s~ip~v~~~l~~~f~~~v~~~~~p~~aVa~GAa~~a~ 1021 (1242)
+++.|+|.||.+.. +.+.+++.+..+......+..+.+.||+.++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 57789999998876 55666666643211122345788899998864
No 212
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=20.31 E-value=2.5e+02 Score=30.02 Aligned_cols=43 Identities=19% Similarity=0.161 Sum_probs=27.8
Q ss_pred cCCCeeeeechHHHHHHHhccC-CCCCCcEEEEEEeCCcceeeeEE
Q psy5911 162 AGLEVLRIINEPTAAALAYGLD-KKPDDRIIVVYDLGGGTFDISVI 206 (1242)
Q Consensus 162 AGl~~~~li~Ep~AAal~y~~~-~~~~~~~vlV~D~GggT~Dvsv~ 206 (1242)
.|++ +.+.|+..|||++-... .....++++++-+|.| +-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 4776 68999999999974332 2223456777778765 444444
Done!