Query psy5916
Match_columns 190
No_of_seqs 141 out of 634
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 21:44:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5916.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5916hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ql2_B Neurod1, neurogenic dif 99.9 8.1E-24 2.8E-28 147.4 7.3 58 85-144 2-59 (60)
2 1mdy_A Protein (MYOD BHLH doma 99.9 1.8E-23 6.2E-28 149.1 6.1 61 80-143 7-67 (68)
3 2lfh_A DNA-binding protein inh 99.8 1.1E-21 3.6E-26 140.5 3.1 51 88-140 17-67 (68)
4 4aya_A DNA-binding protein inh 99.8 2.1E-20 7.1E-25 141.8 6.7 56 88-145 28-83 (97)
5 3u5v_A Protein MAX, transcript 99.7 3.1E-17 1E-21 119.0 5.3 62 83-145 3-64 (76)
6 1hlo_A Protein (transcription 99.7 1.9E-16 6.4E-21 114.6 9.2 71 82-155 9-79 (80)
7 1nkp_B MAX protein, MYC proto- 99.6 1.2E-15 4E-20 110.8 9.1 65 85-152 2-66 (83)
8 1nkp_A C-MYC, MYC proto-oncoge 99.6 1.6E-14 5.5E-19 106.8 9.5 67 83-151 4-70 (88)
9 1nlw_A MAD protein, MAX dimeri 99.5 1.3E-13 4.3E-18 100.6 9.7 65 86-152 2-66 (80)
10 1am9_A Srebp-1A, protein (ster 99.4 1E-12 3.5E-17 95.7 9.8 66 84-153 5-70 (82)
11 1an4_A Protein (upstream stimu 99.2 2.1E-12 7.2E-17 89.7 1.9 56 85-140 5-61 (65)
12 1a0a_A BHLH, protein (phosphat 99.1 2.8E-11 9.6E-16 84.6 2.9 57 85-141 2-60 (63)
13 4ati_A MITF, microphthalmia-as 99.1 2.7E-10 9.3E-15 88.1 8.5 64 84-148 26-89 (118)
14 4h10_B Circadian locomoter out 99.1 4.5E-10 1.5E-14 80.6 8.6 58 82-143 5-62 (71)
15 4h10_A ARYL hydrocarbon recept 99.0 2.6E-10 9E-15 82.0 4.8 58 83-141 7-64 (73)
16 4f3l_A Mclock, circadian locom 98.4 4.6E-07 1.6E-11 78.9 6.7 55 83-141 10-64 (361)
17 4f3l_B BMAL1B; BHLH, PAS, circ 98.1 2E-06 6.8E-11 76.0 4.6 56 83-139 11-66 (387)
18 4ath_A MITF, microphthalmia-as 97.9 3.8E-05 1.3E-09 56.6 8.0 48 99-147 6-53 (83)
19 3muj_A Transcription factor CO 87.6 1.1 3.9E-05 35.5 6.0 40 98-138 94-133 (138)
20 1pd7_B MAD1; PAH2, SIN3, eukar 53.4 9 0.00031 22.3 2.2 20 121-140 1-20 (26)
21 1faf_A Large T antigen; J doma 37.8 17 0.00057 25.0 2.0 17 95-111 50-66 (79)
22 3mlp_A Transcription factor CO 35.3 7.2 0.00025 35.5 -0.3 40 98-138 320-359 (402)
23 2guz_A Mitochondrial import in 30.2 31 0.0011 23.0 2.3 15 96-110 53-67 (71)
24 1iur_A KIAA0730 protein; DNAJ 28.1 40 0.0014 23.8 2.7 19 95-113 58-76 (88)
25 2dn9_A DNAJ homolog subfamily 24.8 41 0.0014 22.4 2.2 15 95-109 48-62 (79)
26 1zme_C Proline utilization tra 24.7 95 0.0032 19.8 4.0 24 132-155 43-66 (70)
27 2ctr_A DNAJ homolog subfamily 24.0 43 0.0015 23.0 2.2 16 94-109 46-61 (88)
28 2dmx_A DNAJ homolog subfamily 23.7 43 0.0015 23.1 2.2 16 95-110 51-66 (92)
29 2cug_A Mkiaa0962 protein; DNAJ 22.9 46 0.0016 22.9 2.2 16 94-109 56-71 (88)
30 2o8i_A AGR_C_4230P, hypothetic 22.8 2.2E+02 0.0077 22.2 6.5 57 89-148 92-153 (165)
31 2ej7_A HCG3 gene; HCG3 protein 21.5 42 0.0014 22.5 1.7 15 95-109 51-65 (82)
32 2ctp_A DNAJ homolog subfamily 21.0 47 0.0016 22.1 1.9 15 95-109 47-61 (78)
No 1
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=99.89 E-value=8.1e-24 Score=147.44 Aligned_cols=58 Identities=55% Similarity=0.748 Sum_probs=54.7
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy5916 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144 (190)
Q Consensus 85 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e 144 (190)
+|.++|+|||+||++||+||+.||.+||.. +.++|||||+||++||+||.+|+++|++
T Consensus 2 rR~~~N~rER~R~~~iN~af~~LR~~lP~~--~~~~klSKi~tLr~Ai~YI~~L~~~L~~ 59 (60)
T 2ql2_B 2 RRMKANARERNRMHGLNAALDNLRKVVPCY--SKTQKLSKIETLRLAKNYIWALSEILRS 59 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSSC--CSSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHccCC--CCcCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999986 5799999999999999999999998853
No 2
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=99.88 E-value=1.8e-23 Score=149.09 Aligned_cols=61 Identities=26% Similarity=0.335 Sum_probs=56.2
Q ss_pred ccchhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy5916 80 RQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143 (190)
Q Consensus 80 ~~~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~ 143 (190)
.....+|.++|+|||+||+.||+||+.||++||.. .++|||||+||++||+||.+|+++|+
T Consensus 7 ~~~~~rR~~aN~rER~R~~~iN~af~~LR~~iP~~---~~~KlSKi~tLr~Ai~YI~~L~~~L~ 67 (68)
T 1mdy_A 7 TTNADRRKAATMRERRRLSKVNEAFETLKRSTSSN---PNQRLPKVEILRNAIRYIEGLQALLR 67 (68)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSC---TTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchhhhhHhhHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 34567999999999999999999999999999974 58999999999999999999999885
No 3
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.83 E-value=1.1e-21 Score=140.46 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy5916 88 NINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140 (190)
Q Consensus 88 ~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~ 140 (190)
.||+|||+||++||+||+.||++||+. |.++|||||||||+||+||.+|+.
T Consensus 17 ~a~erER~Rm~~lN~aF~~LR~~VP~~--p~~kKLSKiEtLr~Ai~YI~~Lq~ 67 (68)
T 2lfh_A 17 PAAEEPLSLLDDMNHCYSRLRELVPGV--PRGTQLSQVEILQRVIDYILDLQV 67 (68)
T ss_dssp CCBCCCSCSSSHHHHHHHHHHHHCCCC--CTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCccHHHHHHHHHHHHHHHHc
Confidence 579999999999999999999999996 699999999999999999999974
No 4
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}
Probab=99.81 E-value=2.1e-20 Score=141.79 Aligned_cols=56 Identities=25% Similarity=0.360 Sum_probs=49.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 88 NINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145 (190)
Q Consensus 88 ~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~ 145 (190)
.+..+||.||++||+||+.||++||+. |.++|||||||||+||+||.+|+++|++.
T Consensus 28 ~~~~~~r~Rm~~lN~AF~~LR~~vP~~--p~~kKLSKIETLRlAi~YI~~Lq~~L~~~ 83 (97)
T 4aya_A 28 TPVDDPMSLLYNMNDCYSKLKELVPSI--PQNKKVSKMEILQHVIDYILDLQIALDSH 83 (97)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHCTTS--CSSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccHHHHHHHHHHHHHHHHHHCCCC--CCCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 446777999999999999999999986 68999999999999999999999999864
No 5
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A*
Probab=99.68 E-value=3.1e-17 Score=119.01 Aligned_cols=62 Identities=29% Similarity=0.289 Sum_probs=50.1
Q ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145 (190)
Q Consensus 83 ~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~ 145 (190)
..+|..+|++||+|+..||++|+.||.+||.. .+.++++||++||+.||+||..|++.|.|.
T Consensus 3 ~~rR~~hN~~ER~Rr~~IN~~f~~Lr~~vP~~-~~~~K~~sK~~IL~~AieYI~~Lq~~l~e~ 64 (76)
T 3u5v_A 3 ADKRAHHNALERKRRRDINEAFRELGRMCQMH-LKSDKAQTKLLILQQAVQVILGLEQQVRER 64 (76)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHhhchHHHhhhHHHHHHHHHHHHHHcCCC-CCccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999942 135677799999999999999999998774
No 6
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.67 E-value=1.9e-16 Score=114.58 Aligned_cols=71 Identities=25% Similarity=0.287 Sum_probs=64.1
Q ss_pred chhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5916 82 GKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQ 155 (190)
Q Consensus 82 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~~~~~~q~~ 155 (190)
...+|..+|++||+|+..||++|+.|+.+||.. .+.|+||++||+.||+||.+|+..++++...+..+..+
T Consensus 9 ~~~~R~~hn~~Er~RR~~in~~f~~Lr~lvP~~---~~~k~sK~~iL~~Ai~YI~~L~~~~~~L~~e~~~L~~~ 79 (80)
T 1hlo_A 9 DADKRAHHNALERKRRDHIKDSFHSLRDSVPSL---QGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQ 79 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGG---TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHHHHHCcCC---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456899999999999999999999999999985 45789999999999999999999999998888777543
No 7
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=99.63 E-value=1.2e-15 Score=110.76 Aligned_cols=65 Identities=26% Similarity=0.296 Sum_probs=57.7
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYI 152 (190)
Q Consensus 85 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~~~~~~ 152 (190)
+|..+|.+||+|+..||++|+.|+.+||.. .+.|+||++||+.||+||.+|+..++++...+..+
T Consensus 2 rR~~hn~~Er~RR~~in~~f~~Lr~lvP~~---~~~k~sK~~iL~~Ai~YI~~L~~~~~~l~~e~~~L 66 (83)
T 1nkp_B 2 KRAHHNALERKRRDHIKDSFHSLRDSVPSL---QGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDL 66 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSGGG---TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999985 46889999999999999999998777666655544
No 8
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.56 E-value=1.6e-14 Score=106.82 Aligned_cols=67 Identities=27% Similarity=0.267 Sum_probs=58.0
Q ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITY 151 (190)
Q Consensus 83 ~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~~~~~ 151 (190)
..+|..+|+.||+|...||++|+.||.+||.. +.+.|+||+.||+.||+||..|+.....+...++.
T Consensus 4 ~~~R~~Hn~~ER~RR~~ln~~f~~Lr~~vP~~--~~~~K~sK~~iL~~A~~YI~~L~~~~~~l~~~~~~ 70 (88)
T 1nkp_A 4 NVKRRTHNVLERQRRNELKRSFFALRDQIPEL--ENNEKAPKVVILKKATAYILSVQAEEQKLISEEDL 70 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGG--TTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999985 46799999999999999999999876655444443
No 9
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=99.49 E-value=1.3e-13 Score=100.59 Aligned_cols=65 Identities=22% Similarity=0.284 Sum_probs=57.3
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYI 152 (190)
Q Consensus 86 R~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~~~~~~ 152 (190)
|..+|+.||+|...||++|+.||..||.. +.+.|+||+.||+.|++||..|+....++......+
T Consensus 2 R~~HN~~ER~RR~~lk~~f~~Lr~~vP~~--~~~~k~sk~~iL~kA~~yI~~L~~~~~~l~~e~~~L 66 (80)
T 1nlw_A 2 RSTHNEMEKNRRAHLRLSLEKLKGLVPLG--PDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQL 66 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCC--SSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999985 478999999999999999999998876666555544
No 10
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=99.42 E-value=1e-12 Score=95.70 Aligned_cols=66 Identities=27% Similarity=0.295 Sum_probs=59.8
Q ss_pred hHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQ 153 (190)
Q Consensus 84 ~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~~~~~~q 153 (190)
.+|..+|..||+|...||++|..|+..||. .+.|++|+.||..||+||.+|+..++.+......+.
T Consensus 5 ~rr~~H~~~ErrRR~~in~~f~~L~~lvP~----~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~ 70 (82)
T 1am9_A 5 EKRTAHNAIEKRYRSSINDKIIELKDLVVG----TEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLR 70 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999997 468999999999999999999999988877666554
No 11
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1
Probab=99.23 E-value=2.1e-12 Score=89.65 Aligned_cols=56 Identities=29% Similarity=0.292 Sum_probs=48.4
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHH
Q psy5916 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSP-SVRKLSKIATLLLAKNYILMQAN 140 (190)
Q Consensus 85 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p-~~kKLSKietLr~Ai~YI~~L~~ 140 (190)
+|..+|+.||+|...||++|++|+.+||..... ...|++|+.||..||+||.+|+.
T Consensus 5 rr~~H~~~Er~RR~~in~~~~~L~~lvP~~~~~~~~~k~~Ka~IL~~ai~YI~~Lq~ 61 (65)
T 1an4_A 5 RRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQ 61 (65)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHT
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHCcCcccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 577899999999999999999999999985311 12489999999999999999875
No 12
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1
Probab=99.10 E-value=2.8e-11 Score=84.56 Aligned_cols=57 Identities=28% Similarity=0.234 Sum_probs=48.7
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHH
Q psy5916 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSP--SVRKLSKIATLLLAKNYILMQANA 141 (190)
Q Consensus 85 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p--~~kKLSKietLr~Ai~YI~~L~~~ 141 (190)
+|...+.-||.|...||.+|+.|+.+||..... .+.++||.+||.+||+||.+|++.
T Consensus 2 kr~~H~~aEr~RR~rIn~~~~~L~~LlP~~~~~~~~~~k~sKa~iL~~Ai~YIk~Lq~~ 60 (63)
T 1a0a_A 2 KRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQN 60 (63)
T ss_dssp CTTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTC
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHCCCcccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 466789999999999999999999999964211 258999999999999999999763
No 13
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=99.10 E-value=2.7e-10 Score=88.12 Aligned_cols=64 Identities=25% Similarity=0.324 Sum_probs=51.0
Q ss_pred hHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRI 148 (190)
Q Consensus 84 ~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~~ 148 (190)
.+|...|.-||+|...||+.|..|+..||... ..+.|++|..||..||+||.+|+..++.+..+
T Consensus 26 ~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~-~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~ 89 (118)
T 4ati_A 26 QKKDNHNLIERRRRFNINDRIKELGTLIPKSN-DPDMRWNKGTILKASVDYIRKLQREQQRAKDL 89 (118)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHSCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36778999999999999999999999999853 24679999999999999999999888776643
No 14
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.09 E-value=4.5e-10 Score=80.61 Aligned_cols=58 Identities=22% Similarity=0.369 Sum_probs=52.1
Q ss_pred chhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy5916 82 GKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143 (190)
Q Consensus 82 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~ 143 (190)
...+|...|..||+|...||+.|.+|+..||. ...|+.|..||+.||+||..|+..+.
T Consensus 5 ~~~kR~~Hn~iErrRRd~IN~~i~eL~~LvP~----~~~K~dK~sIL~~aI~yik~Lq~~~~ 62 (71)
T 4h10_B 5 DKAKRVSRNKSEKKRRDQFNVLIKELGSMLPG----NARKMDKSTVLQKSIDFLRKHKEITA 62 (71)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSS----CCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhhhhhHHHhhHHHHHHHHHHHHHHhCCC----CCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 34578899999999999999999999999995 46899999999999999999987653
No 15
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.01 E-value=2.6e-10 Score=81.96 Aligned_cols=58 Identities=29% Similarity=0.405 Sum_probs=50.9
Q ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy5916 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANA 141 (190)
Q Consensus 83 ~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~ 141 (190)
+.+|...|.-||+|...||++|++|+..||... ....|+.|+.||++||+||..|+..
T Consensus 7 ~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~~-~~~~KldKasIL~~tV~ylk~l~~~ 64 (73)
T 4h10_A 7 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLRGA 64 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHH-TCSSCCCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHccccc-cccccccHHHHHHHHHHHHHHHhcC
Confidence 457888999999999999999999999999742 2468999999999999999988654
No 16
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=98.38 E-value=4.6e-07 Score=78.91 Aligned_cols=55 Identities=24% Similarity=0.405 Sum_probs=42.5
Q ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy5916 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANA 141 (190)
Q Consensus 83 ~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~ 141 (190)
+.+|..+|..||+|...||..|.+|+.+||. ...||.|..||++||.||..|..+
T Consensus 10 ~~~~~~~~~~e~~rr~~~n~~~~~l~~~~p~----~~~~~dk~~il~~~~~~~~~~~~~ 64 (361)
T 4f3l_A 10 KAKRVSRNKSEKKRRDQFNVLIKELGSMLPG----NARKMDKSTVLQKSIDFLRKHKET 64 (361)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHTCCS----SSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHhCCC----CCCCcCHHHHHHHHHHHHHHHHhh
Confidence 3467788999999999999999999999993 468999999999999999988754
No 17
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=98.10 E-value=2e-06 Score=75.97 Aligned_cols=56 Identities=29% Similarity=0.402 Sum_probs=49.3
Q ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy5916 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA 139 (190)
Q Consensus 83 ~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~ 139 (190)
+.+|...|.-||+|...||..|.+|+.+||... ....||.|..||++||.||..|+
T Consensus 11 ~~~~~~~~~~ek~rR~~~n~~~~~L~~l~p~~~-~~~~k~dk~~il~~~~~~l~~~~ 66 (387)
T 4f3l_B 11 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLR 66 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-HCSSCCCHHHHHHHHHHHHHHHH
T ss_pred hhhcccccchhhcchHHHHHHHHHHHHhcCCCC-ccccccCHHHHHHHHHHHHHHhh
Confidence 446788999999999999999999999999642 24689999999999999999876
No 18
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=97.94 E-value=3.8e-05 Score=56.63 Aligned_cols=48 Identities=21% Similarity=0.310 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5916 99 DLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRR 147 (190)
Q Consensus 99 ~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L~~~L~e~~~ 147 (190)
+||+.+.+|...||... ..+-|++|-.||+.|++||.+|++....++.
T Consensus 6 nIN~~I~EL~~LiP~~~-~~~~k~nKg~IL~ksvdYI~~Lq~e~~r~~e 53 (83)
T 4ath_A 6 NINDRIKELGTLIPKSN-DPDMRWNKGTILKASVDYIRKLQREQQRAKD 53 (83)
T ss_dssp HHHHHHHHHHHHSCCCC-CTTCCCSHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred hHHHhhhhhhccCCCCC-CcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999753 3678999999999999999999876544433
No 19
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=87.59 E-value=1.1 Score=35.46 Aligned_cols=40 Identities=20% Similarity=0.240 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy5916 98 HDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQ 138 (190)
Q Consensus 98 ~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L 138 (190)
-.|+-+|.+|.+.||-. -....+|.|.-+|+.|.++...|
T Consensus 94 PtId~gfqrl~k~~pr~-pgdpe~lpk~~~lkraa~l~e~~ 133 (138)
T 3muj_A 94 PTIDYGFQRLQKVIPRH-PGDPERLPKEVLLKRAADLVEAL 133 (138)
T ss_dssp CCHHHHHHHHHHHSCCC-TTCCSSCCHHHHHHHHHHHHHHH
T ss_pred CccccchhhhccccCCC-CCChhhhhHHHHHHHHHHHHHHH
Confidence 46899999999999974 33669999999999999998765
No 20
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=53.38 E-value=9 Score=22.33 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=16.6
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy5916 121 KLSKIATLLLAKNYILMQAN 140 (190)
Q Consensus 121 KLSKietLr~Ai~YI~~L~~ 140 (190)
+|.+|++|..|.+|+...++
T Consensus 1 ~~~nvq~LLeAAeyLErrEr 20 (26)
T 1pd7_B 1 VRMNIQMLLEAADYLERRER 20 (26)
T ss_dssp CCCSTHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHH
Confidence 46689999999999986665
No 21
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=37.81 E-value=17 Score=25.04 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHhhC
Q psy5916 95 RRMHDLNDALDELRAVI 111 (190)
Q Consensus 95 ~Rm~~lN~AF~~LR~~l 111 (190)
.+++.||+||+.|.+.+
T Consensus 50 ~~f~~i~~AYe~L~~~~ 66 (79)
T 1faf_A 50 ALMQELNSLWGTFKTEV 66 (79)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHH
Confidence 46999999999998754
No 22
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=35.29 E-value=7.2 Score=35.51 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy5916 98 HDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQ 138 (190)
Q Consensus 98 ~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI~~L 138 (190)
-.|+-+|.+|.+.||-- ...-.+|.|--+|+.|.+++..|
T Consensus 320 PtIdygfqRLqK~iPrh-pGdpErLpKevilkRaadl~eal 359 (402)
T 3mlp_A 320 PTIDYGFQRLQKVIPRH-PGDPERLPKEVILKRAADLVEAL 359 (402)
T ss_dssp CTTTTTTTTTTTC------------CHHHHHHHHHHHHHHH
T ss_pred CccccchhhhcccCCCC-CCChHhChHHHHHHHHHHHHHHh
Confidence 46888999999999974 23568999999999999998755
No 23
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=30.20 E-value=31 Score=23.03 Aligned_cols=15 Identities=27% Similarity=0.217 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHhh
Q psy5916 96 RMHDLNDALDELRAV 110 (190)
Q Consensus 96 Rm~~lN~AF~~LR~~ 110 (190)
+++.||+||+.|.+.
T Consensus 53 ~f~~i~~Aye~L~~~ 67 (71)
T 2guz_A 53 LATKINEAKDFLEKR 67 (71)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 799999999999874
No 24
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=28.05 E-value=40 Score=23.76 Aligned_cols=19 Identities=11% Similarity=0.198 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHhhCCC
Q psy5916 95 RRMHDLNDALDELRAVIPY 113 (190)
Q Consensus 95 ~Rm~~lN~AF~~LR~~lP~ 113 (190)
.+++.||+||+.|.+...-
T Consensus 58 ~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 58 EVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhccc
Confidence 4799999999999998854
No 25
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.77 E-value=41 Score=22.40 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHh
Q psy5916 95 RRMHDLNDALDELRA 109 (190)
Q Consensus 95 ~Rm~~lN~AF~~LR~ 109 (190)
.+++.||+||+.|.+
T Consensus 48 ~~f~~i~~Ay~~L~d 62 (79)
T 2dn9_A 48 EKFSQLAEAYEVLSD 62 (79)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCC
Confidence 468999999999975
No 26
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=24.68 E-value=95 Score=19.84 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q psy5916 132 KNYILMQANALEELRRIITYIQAQ 155 (190)
Q Consensus 132 i~YI~~L~~~L~e~~~~~~~~q~~ 155 (190)
..||..|+.-|.++..++..+...
T Consensus 43 ~~~~~~L~~ri~~Le~~l~~l~~~ 66 (70)
T 1zme_C 43 TKYLQQLQKDLNDKTEENNRLKAL 66 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357777777777777777776654
No 27
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.99 E-value=43 Score=23.04 Aligned_cols=16 Identities=13% Similarity=0.441 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHh
Q psy5916 94 RRRMHDLNDALDELRA 109 (190)
Q Consensus 94 R~Rm~~lN~AF~~LR~ 109 (190)
..+++.||+||+.|.+
T Consensus 46 ~~~f~~i~~Ay~~L~d 61 (88)
T 2ctr_A 46 EAKFREIAEAYETLSD 61 (88)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4579999999999975
No 28
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.71 E-value=43 Score=23.08 Aligned_cols=16 Identities=13% Similarity=0.308 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHhh
Q psy5916 95 RRMHDLNDALDELRAV 110 (190)
Q Consensus 95 ~Rm~~lN~AF~~LR~~ 110 (190)
.+++.||+||+.|.+-
T Consensus 51 ~~f~~i~~Ay~~L~d~ 66 (92)
T 2dmx_A 51 KKFKLVSEAYEVLSDS 66 (92)
T ss_dssp HHHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHCCH
Confidence 4689999999999753
No 29
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=22.93 E-value=46 Score=22.86 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHh
Q psy5916 94 RRRMHDLNDALDELRA 109 (190)
Q Consensus 94 R~Rm~~lN~AF~~LR~ 109 (190)
..+++.||+||+.|.+
T Consensus 56 ~~~f~~i~~Ay~~L~d 71 (88)
T 2cug_A 56 EDRFIQISKAYEILSN 71 (88)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 3479999999999975
No 30
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=22.82 E-value=2.2e+02 Score=22.16 Aligned_cols=57 Identities=25% Similarity=0.307 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHH
Q psy5916 89 INARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI-----LMQANALEELRRI 148 (190)
Q Consensus 89 aN~RER~Rm~~lN~AF~~LR~~lP~~~~p~~kKLSKietLr~Ai~YI-----~~L~~~L~e~~~~ 148 (190)
...-|+.|+..+|.+|++== -.|..- .-+-.+|-+||..--.-| .-+...++|+.+|
T Consensus 92 ~~~~~~~~l~~lN~~Ye~kF-GfpFvi--~v~g~~~~~Il~~l~~Rl~nd~~~E~~~a~~e~~kI 153 (165)
T 2o8i_A 92 LSPQEHARFTQLNSAYTEKF-GFPFII--AVKGLNRHDILSAFDTRIDNNAAQEFATATGQVEKI 153 (165)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-SSCCCC--CCTTCCHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHc-CCeeEe--eeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 45668899999999997644 667763 567789999986655444 3444555555544
No 31
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.51 E-value=42 Score=22.51 Aligned_cols=15 Identities=27% Similarity=0.521 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHh
Q psy5916 95 RRMHDLNDALDELRA 109 (190)
Q Consensus 95 ~Rm~~lN~AF~~LR~ 109 (190)
.+++.||+||+.|..
T Consensus 51 ~~f~~i~~Ay~~L~d 65 (82)
T 2ej7_A 51 RRFKQVAEAYEVLSD 65 (82)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHCC
Confidence 468999999999965
No 32
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.00 E-value=47 Score=22.10 Aligned_cols=15 Identities=13% Similarity=0.193 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHh
Q psy5916 95 RRMHDLNDALDELRA 109 (190)
Q Consensus 95 ~Rm~~lN~AF~~LR~ 109 (190)
.+++.||+||+.|.+
T Consensus 47 ~~f~~i~~Ay~~L~d 61 (78)
T 2ctp_A 47 EAFKAIGTAYAVLSN 61 (78)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHCC
Confidence 468999999999964
Done!