Your job contains 1 sequence.
>psy5916
MDSNSGSYYSNETSQVPGRRTPLGNVGLGGFYFPPSVSAVSAGPPSDENCPEHLSHNSRF
QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR
KLSKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMPPGFDLQATMLPVQQPDTPP
PSTSDPSNVS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5916
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032651 - symbol:Oli "Olig family" species:7227 "D... 365 3.2e-41 2
UNIPROTKB|F1RTA8 - symbol:BHLHE22 "Uncharacterized protei... 339 8.8e-31 1
ZFIN|ZDB-GENE-040426-1411 - symbol:bhlhe22 "basic helix-l... 339 8.8e-31 1
UNIPROTKB|Q8NFJ8 - symbol:BHLHE22 "Class E basic helix-lo... 337 1.4e-30 1
MGI|MGI:1930001 - symbol:Bhlhe22 "basic helix-loop-helix ... 337 1.4e-30 1
UNIPROTKB|E1BEW2 - symbol:LOC525275 "Uncharacterized prot... 335 2.3e-30 1
RGD|1305451 - symbol:Bhlhe22 "basic helix-loop-helix fami... 335 2.3e-30 1
UNIPROTKB|Q71T09 - symbol:BHLHE22 "Class E basic helix-lo... 332 4.9e-30 1
ZFIN|ZDB-GENE-050913-22 - symbol:bhlhe23 "basic helix-loo... 330 7.9e-30 1
UNIPROTKB|Q71T10 - symbol:BHLHE23 "BHLH transcription fac... 318 1.5e-28 1
MGI|MGI:2153710 - symbol:Bhlhe23 "basic helix-loop-helix ... 316 2.4e-28 1
UNIPROTKB|F1N4A3 - symbol:BHLHE23 "Uncharacterized protei... 313 5.0e-28 1
RGD|1559760 - symbol:Bhlhe23 "basic helix-loop-helix fami... 313 5.0e-28 1
UNIPROTKB|Q8NDY6 - symbol:BHLHE23 "Class E basic helix-lo... 311 8.2e-28 1
ZFIN|ZDB-GENE-030131-4013 - symbol:olig2 "oligodendrocyte... 264 7.8e-23 1
UNIPROTKB|Q13516 - symbol:OLIG2 "Oligodendrocyte transcri... 254 9.0e-22 1
MGI|MGI:1355331 - symbol:Olig2 "oligodendrocyte transcrip... 254 9.0e-22 1
UNIPROTKB|G3V612 - symbol:Olig2 "Protein Olig2" species:1... 254 9.0e-22 1
UNIPROTKB|J9P6I6 - symbol:OLIG2 "Uncharacterized protein"... 253 1.3e-21 1
UNIPROTKB|Q90XB3 - symbol:OLIG2 "Oligodendrocyte transcri... 250 2.4e-21 1
WB|WBGene00013665 - symbol:hlh-32 species:6239 "Caenorhab... 250 2.4e-21 1
WB|WBGene00001961 - symbol:hlh-17 species:6239 "Caenorhab... 249 3.0e-21 1
UNIPROTKB|E1BZ57 - symbol:LOC100857919 "Uncharacterized p... 240 2.7e-20 1
UNIPROTKB|G3MYF1 - symbol:OLIG3 "Uncharacterized protein"... 239 3.5e-20 1
UNIPROTKB|E2QYV0 - symbol:OLIG3 "Uncharacterized protein"... 239 3.5e-20 1
UNIPROTKB|Q7RTU3 - symbol:OLIG3 "Oligodendrocyte transcri... 239 3.5e-20 1
UNIPROTKB|F1S693 - symbol:OLIG3 "Uncharacterized protein"... 239 3.5e-20 1
MGI|MGI:2149955 - symbol:Olig3 "oligodendrocyte transcrip... 239 3.5e-20 1
RGD|1305997 - symbol:Olig3 "oligodendrocyte transcription... 239 3.5e-20 1
ZFIN|ZDB-GENE-080903-1 - symbol:olig3 "oligodendrocyte tr... 239 3.5e-20 1
ZFIN|ZDB-GENE-030131-3580 - symbol:olig4 "oligodendrocyte... 233 1.5e-19 1
WB|WBGene00009540 - symbol:hlh-31 species:6239 "Caenorhab... 218 5.8e-18 1
UNIPROTKB|Q8TAK6 - symbol:OLIG1 "Oligodendrocyte transcri... 199 6.0e-16 1
UNIPROTKB|F1N3Q1 - symbol:OLIG1 "Uncharacterized protein"... 195 1.6e-15 1
UNIPROTKB|F1SGZ6 - symbol:OLIG1 "Uncharacterized protein"... 192 3.3e-15 1
MGI|MGI:1355334 - symbol:Olig1 "oligodendrocyte transcrip... 192 3.3e-15 1
RGD|621129 - symbol:Olig1 "oligodendrocyte transcription ... 192 3.3e-15 1
UNIPROTKB|J9P7L0 - symbol:OLIG1 "Uncharacterized protein"... 189 2.7e-14 1
WB|WBGene00001960 - symbol:hlh-16 species:6239 "Caenorhab... 157 1.7e-11 1
ZFIN|ZDB-GENE-050107-2 - symbol:olig1 "oligodendrocyte li... 102 6.0e-11 2
FB|FBgn0023091 - symbol:dimm "dimmed" species:7227 "Droso... 158 7.0e-11 1
UNIPROTKB|E1BLE3 - symbol:NEUROD2 "Neurogenic differentia... 156 1.1e-10 1
UNIPROTKB|E2R9M5 - symbol:NEUROD2 "Neurogenic differentia... 156 1.1e-10 1
UNIPROTKB|Q15784 - symbol:NEUROD2 "Neurogenic differentia... 156 1.1e-10 1
RGD|3166 - symbol:Neurod2 "neuronal differentiation 2" sp... 156 1.1e-10 1
MGI|MGI:107755 - symbol:Neurod2 "neurogenic differentiati... 156 1.1e-10 1
ZFIN|ZDB-GENE-010608-1 - symbol:neurod6a "neurogenic diff... 155 1.5e-10 1
UNIPROTKB|Q91616 - symbol:neurod1 "Neurogenic differentia... 154 1.5e-10 1
ZFIN|ZDB-GENE-010608-3 - symbol:neurod2 "neurogenic diffe... 152 2.7e-10 1
UNIPROTKB|E1C3F4 - symbol:NEUROD6 "Neurogenic differentia... 151 2.9e-10 1
UNIPROTKB|Q08DI0 - symbol:NEUROD6 "Neurogenic differentia... 151 2.9e-10 1
UNIPROTKB|E2R3T3 - symbol:NEUROD6 "Neurogenic differentia... 151 2.9e-10 1
UNIPROTKB|Q96NK8 - symbol:NEUROD6 "Neurogenic differentia... 151 2.9e-10 1
MGI|MGI:106593 - symbol:Neurod6 "neurogenic differentiati... 151 2.9e-10 1
RGD|1562793 - symbol:Neurod6 "neuronal differentiation 6"... 151 2.9e-10 1
ZFIN|ZDB-GENE-010608-4 - symbol:neurog3 "neurogenin 3" sp... 143 5.2e-10 1
ZFIN|ZDB-GENE-990415-172 - symbol:neurod "neurogenic diff... 148 6.8e-10 1
ZFIN|ZDB-GENE-010608-2 - symbol:neurod6b "neurogenic diff... 147 6.9e-10 1
UNIPROTKB|F1NKX5 - symbol:NEUROD1 "Neurogenic differentia... 148 7.2e-10 1
UNIPROTKB|P79765 - symbol:NEUROD1 "Neurogenic differentia... 148 7.2e-10 1
ZFIN|ZDB-GENE-030730-1 - symbol:neurod4 "neurogenic diffe... 147 8.7e-10 1
MGI|MGI:1339708 - symbol:Neurod1 "neurogenic differentiat... 147 9.2e-10 1
UNIPROTKB|E1C082 - symbol:BHLHA15 "Uncharacterized protei... 140 1.1e-09 1
UNIPROTKB|H9L3S1 - symbol:NEUROD4 "Neurogenic differentia... 145 1.3e-09 1
UNIPROTKB|P79766 - symbol:NEUROD4 "Neurogenic differentia... 145 1.3e-09 1
UNIPROTKB|E1BMG6 - symbol:NEUROD4 "Neurogenic differentia... 145 1.3e-09 1
MGI|MGI:108055 - symbol:Neurod4 "neurogenic differentiati... 145 1.3e-09 1
RGD|1310434 - symbol:Neurod4 "neuronal differentiation 4"... 145 1.3e-09 1
UNIPROTKB|E2R1V7 - symbol:NEUROD4 "Neurogenic differentia... 145 1.3e-09 1
UNIPROTKB|Q9HD90 - symbol:NEUROD4 "Neurogenic differentia... 145 1.3e-09 1
UNIPROTKB|F1SR46 - symbol:NEUROD4 "Neurogenic differentia... 145 1.3e-09 1
ZFIN|ZDB-GENE-990415-174 - symbol:neurog1 "neurogenin 1" ... 139 1.4e-09 1
UNIPROTKB|Q60430 - symbol:NEUROD1 "Neurogenic differentia... 145 1.5e-09 1
UNIPROTKB|F1N2Z3 - symbol:NEUROD1 "Neurogenic differentia... 145 1.5e-09 1
UNIPROTKB|Q13562 - symbol:NEUROD1 "Neurogenic differentia... 145 1.5e-09 1
UNIPROTKB|F1RYP1 - symbol:NEUROD1 "Neurogenic differentia... 145 1.5e-09 1
RGD|3165 - symbol:Neurod1 "neuronal differentiation 1" sp... 145 1.5e-09 1
UNIPROTKB|P79920 - symbol:neurod4 "Neurogenic differentia... 143 1.9e-09 1
ZFIN|ZDB-GENE-990415-17 - symbol:atoh1a "atonal homolog 1... 142 2.0e-09 1
UNIPROTKB|G5E6I7 - symbol:LOC100848337 "Uncharacterized p... 135 3.6e-09 1
UNIPROTKB|F1RFL0 - symbol:BHLHA15 "Uncharacterized protei... 135 3.6e-09 1
UNIPROTKB|E2R952 - symbol:BHLHA15 "Uncharacterized protei... 134 4.7e-09 1
UNIPROTKB|Q7RTS1 - symbol:BHLHA15 "Class A basic helix-lo... 134 4.7e-09 1
MGI|MGI:891976 - symbol:Bhlha15 "basic helix-loop-helix f... 134 4.7e-09 1
RGD|3091 - symbol:Bhlha15 "basic helix-loop-helix family,... 134 4.7e-09 1
ZFIN|ZDB-GENE-070803-3 - symbol:bhlha15 "basic helix-loop... 133 5.9e-09 1
FB|FBgn0015550 - symbol:tap "target of Poxn" species:7227... 123 7.0e-09 2
FB|FBgn0053557 - symbol:CG33557 species:7227 "Drosophila ... 109 9.2e-09 2
MGI|MGI:109619 - symbol:Neurog2 "neurogenin 2" species:10... 134 1.1e-08 1
ZFIN|ZDB-GENE-041201-1 - symbol:atoh1b "atonal homolog 1b... 130 1.2e-08 1
RGD|1309061 - symbol:Neurog2 "neurogenin 2" species:10116... 132 1.9e-08 1
UNIPROTKB|F1P471 - symbol:NEUROG1 "Uncharacterized protei... 128 2.0e-08 1
MGI|MGI:104654 - symbol:Atoh1 "atonal homolog 1 (Drosophi... 134 2.4e-08 1
RGD|1565171 - symbol:Atoh1 "atonal homolog 1 (Drosophila)... 134 2.4e-08 1
UNIPROTKB|A4IFC1 - symbol:ATOH1 "ATOH1 protein" species:9... 134 2.4e-08 1
UNIPROTKB|F1RWW1 - symbol:ATOH1 "Uncharacterized protein"... 134 2.4e-08 1
UNIPROTKB|Q92858 - symbol:ATOH1 "Protein atonal homolog 1... 134 2.4e-08 1
UNIPROTKB|E2RG90 - symbol:ATOH1 "Uncharacterized protein"... 134 2.4e-08 1
UNIPROTKB|Q5IS79 - symbol:ATOH1 "Protein atonal homolog 1... 134 2.4e-08 1
UNIPROTKB|F1PHE1 - symbol:NEUROG3 "Uncharacterized protei... 127 3.2e-08 1
WARNING: Descriptions of 137 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0032651 [details] [associations]
symbol:Oli "Olig family" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AE014134 GO:GO:0006355
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG308077
GeneTree:ENSGT00530000063239 EMBL:BT004905 RefSeq:NP_001188830.1
RefSeq:NP_001188831.1 RefSeq:NP_523592.1 UniGene:Dm.448 SMR:Q9VJC1
IntAct:Q9VJC1 MINT:MINT-323099 STRING:Q9VJC1
EnsemblMetazoa:FBtr0080986 EnsemblMetazoa:FBtr0303252
EnsemblMetazoa:FBtr0303253 GeneID:35066 KEGG:dme:Dmel_CG5545
UCSC:CG5545-RA CTD:35066 FlyBase:FBgn0032651 InParanoid:Q9VJC1
OMA:ILMQQNA OrthoDB:EOG4J0ZR1 GenomeRNAi:35066 NextBio:791651
Uniprot:Q9VJC1
Length = 232
Score = 365 (133.5 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 76/89 (85%), Positives = 80/89 (89%)
Query: 67 GAMGSLQPLAK-KNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI 125
GA GS K KNRQGKTVRLNINARERRRMHDLNDALDELR+VIPYAHSPSVRKLSKI
Sbjct: 110 GASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKI 169
Query: 126 ATLLLAKNYILMQANALEELRRIITYIQA 154
ATLLLAKNYILMQ NALEELRR++ YIQ+
Sbjct: 170 ATLLLAKNYILMQQNALEELRRLLAYIQS 198
Score = 89 (36.4 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 16/17 (94%), Positives = 17/17 (100%)
Query: 16 VPGRRTPLGNVGLGGFY 32
VPGRRTPLG+VGLGGFY
Sbjct: 43 VPGRRTPLGSVGLGGFY 59
>UNIPROTKB|F1RTA8 [details] [associations]
symbol:BHLHE22 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0021960 "anterior commissure
morphogenesis" evidence=IEA] [GO:0021957 "corticospinal tract
morphogenesis" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0045892 Gene3D:4.10.280.10
SUPFAM:SSF47459 KO:K09086 OMA:MERGMHL GO:GO:0060040
GeneTree:ENSGT00530000063239 EMBL:CU915441 RefSeq:XP_003481442.1
Ensembl:ENSSSCT00000006818 GeneID:100739687 KEGG:ssc:100739687
Uniprot:F1RTA8
Length = 369
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 69/91 (75%), Positives = 78/91 (85%)
Query: 66 SGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI 125
SG G +KK+++ K +RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI
Sbjct: 212 SGGSGGSGGSSKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI 271
Query: 126 ATLLLAKNYILMQANALEELRRIITYIQAQG 156
ATLLLAKNYILMQA ALEE+RR++ Y+ QG
Sbjct: 272 ATLLLAKNYILMQAQALEEMRRLVAYLN-QG 301
>ZFIN|ZDB-GENE-040426-1411 [details] [associations]
symbol:bhlhe22 "basic helix-loop-helix family,
member e22" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-040426-1411 Gene3D:4.10.280.10 SUPFAM:SSF47459
KO:K09086 CTD:27319 GeneTree:ENSGT00530000063239 EMBL:BX323067
IPI:IPI00488224 RefSeq:NP_957249.2 UniGene:Dr.84568
Ensembl:ENSDART00000147658 GeneID:393930 KEGG:dre:393930
NextBio:20814902 ArrayExpress:F1R9F5 Bgee:F1R9F5 Uniprot:F1R9F5
Length = 261
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 74/110 (67%), Positives = 83/110 (75%)
Query: 47 DENCPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDE 106
DE C L + R P G+ KKN++ K +RLNINARERRRMHDLNDALDE
Sbjct: 99 DERCEMMLMTDGRTTVP------GAKSEGGKKNKEQKMLRLNINARERRRMHDLNDALDE 152
Query: 107 LRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQG 156
LRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA ALEE+RR++ Y+ QG
Sbjct: 153 LRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLVAYLN-QG 201
>UNIPROTKB|Q8NFJ8 [details] [associations]
symbol:BHLHE22 "Class E basic helix-loop-helix protein 22"
species:9606 "Homo sapiens" [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021957 "corticospinal tract morphogenesis" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0045892 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 KO:K09086 EMBL:AF504925 EMBL:BK000273
IPI:IPI00168844 RefSeq:NP_689627.1 UniGene:Hs.388788
UniGene:Hs.591870 UniGene:Hs.741446 ProteinModelPortal:Q8NFJ8
SMR:Q8NFJ8 STRING:Q8NFJ8 PhosphoSite:Q8NFJ8 DMDM:74751284
PaxDb:Q8NFJ8 PRIDE:Q8NFJ8 DNASU:27319 Ensembl:ENST00000321870
GeneID:27319 KEGG:hsa:27319 UCSC:uc003xvi.3 CTD:27319
GeneCards:GC08P065492 H-InvDB:HIX0007544 HGNC:HGNC:11963 MIM:613483
neXtProt:NX_Q8NFJ8 PharmGKB:PA36650 eggNOG:NOG308077
InParanoid:Q8NFJ8 OMA:MERGMHL OrthoDB:EOG47M1ZW PhylomeDB:Q8NFJ8
GenomeRNAi:27319 NextBio:50328 Bgee:Q8NFJ8 Genevestigator:Q8NFJ8
GO:GO:0060040 Uniprot:Q8NFJ8
Length = 381
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 68/90 (75%), Positives = 78/90 (86%)
Query: 67 GAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIA 126
G+ S +KK+++ K +RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIA
Sbjct: 225 GSSSSSSSSSKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIA 284
Query: 127 TLLLAKNYILMQANALEELRRIITYIQAQG 156
TLLLAKNYILMQA ALEE+RR++ Y+ QG
Sbjct: 285 TLLLAKNYILMQAQALEEMRRLVAYLN-QG 313
>MGI|MGI:1930001 [details] [associations]
symbol:Bhlhe22 "basic helix-loop-helix family, member e22"
species:10090 "Mus musculus" [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IMP] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=IMP] [GO:0021957
"corticospinal tract morphogenesis" evidence=IGI;IMP] [GO:0021960
"anterior commissure morphogenesis" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0060040 "retinal bipolar neuron differentiation" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:1930001 GO:GO:0005634 GO:GO:0045892 GO:GO:0003682
GO:GO:0000981 Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K09086
CTD:27319 eggNOG:NOG308077 OrthoDB:EOG47M1ZW GO:GO:0060040
EMBL:AF218865 EMBL:AK076228 EMBL:BC053007 IPI:IPI00123300
RefSeq:NP_067535.3 UniGene:Mm.149938 ProteinModelPortal:Q8C6A8
SMR:Q8C6A8 STRING:Q8C6A8 PhosphoSite:Q8C6A8 PRIDE:Q8C6A8
Ensembl:ENSMUST00000026120 GeneID:59058 KEGG:mmu:59058
UCSC:uc008orl.2 GeneTree:ENSGT00530000063239 HOGENOM:HOG000060094
InParanoid:Q8C6A8 BindingDB:Q8C6A8 NextBio:314710 Bgee:Q8C6A8
Genevestigator:Q8C6A8 GO:GO:0021960 GO:GO:0021540 GO:GO:0021957
Uniprot:Q8C6A8
Length = 355
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 75/113 (66%), Positives = 84/113 (74%)
Query: 48 ENCPE-HLSHNSRFQD--PTHSGAMGSLQP-LAKKNRQGKTVRLNINARERRRMHDLNDA 103
E C HL S PT G G +KK+++ K +RLNINARERRRMHDLNDA
Sbjct: 176 EGCSNAHLHGGSGLPPGGPTSGGGSGGGGGGSSKKSKEQKALRLNINARERRRMHDLNDA 235
Query: 104 LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQG 156
LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA ALEE+RR++ Y+ QG
Sbjct: 236 LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLVAYLN-QG 287
>UNIPROTKB|E1BEW2 [details] [associations]
symbol:LOC525275 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0021960 "anterior commissure
morphogenesis" evidence=IEA] [GO:0021957 "corticospinal tract
morphogenesis" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0045892 Gene3D:4.10.280.10
SUPFAM:SSF47459 OMA:MERGMHL GO:GO:0060040
GeneTree:ENSGT00530000063239 EMBL:DAAA02038435 IPI:IPI00842319
Ensembl:ENSBTAT00000047128 Uniprot:E1BEW2
Length = 330
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/91 (75%), Positives = 78/91 (85%)
Query: 66 SGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI 125
SG G +KK+++ K +RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI
Sbjct: 204 SGGGGGGSGGSKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI 263
Query: 126 ATLLLAKNYILMQANALEELRRIITYIQAQG 156
ATLLLAKNYILMQA ALEE+RR++ Y+ QG
Sbjct: 264 ATLLLAKNYILMQAQALEEMRRLVAYLN-QG 293
>RGD|1305451 [details] [associations]
symbol:Bhlhe22 "basic helix-loop-helix family, member e22"
species:10116 "Rattus norvegicus" [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0021540 "corpus
callosum morphogenesis" evidence=IEA;ISO] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=ISO]
[GO:0021957 "corticospinal tract morphogenesis" evidence=IEA;ISO]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA;ISO]
[GO:0030182 "neuron differentiation" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA;ISO] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:1305451
GO:GO:0045892 Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:MERGMHL
OrthoDB:EOG47M1ZW GO:GO:0060040 GeneTree:ENSGT00530000063239
IPI:IPI00367971 Ensembl:ENSRNOT00000033940 UCSC:RGD:1305451
Uniprot:D4A287
Length = 352
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 76/113 (67%), Positives = 85/113 (75%)
Query: 48 ENCPE-HLSHNSRFQD--PTH-SGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDA 103
E C HL S PT SG G +KK+++ K +RLNINARERRRMHDLNDA
Sbjct: 174 EGCSNAHLHGGSGLPPGGPTSGSGGNGG-GGSSKKSKEQKALRLNINARERRRMHDLNDA 232
Query: 104 LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQG 156
LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA ALEE+RR++ Y+ QG
Sbjct: 233 LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLVAYLN-QG 284
>UNIPROTKB|Q71T09 [details] [associations]
symbol:BHLHE22 "Class E basic helix-loop-helix protein 22"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF247676 IPI:IPI00602231 RefSeq:NP_989834.1
UniGene:Gga.5820 ProteinModelPortal:Q71T09 GeneID:395164
KEGG:gga:395164 CTD:395164 KO:K09086 NextBio:20815255
Uniprot:Q71T09
Length = 311
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 66/81 (81%), Positives = 75/81 (92%)
Query: 76 AKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
+KK+++ K +RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI
Sbjct: 163 SKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 222
Query: 136 LMQANALEELRRIITYIQAQG 156
LMQA ALEE+RR++ Y+ QG
Sbjct: 223 LMQAQALEEMRRLVAYLN-QG 242
>ZFIN|ZDB-GENE-050913-22 [details] [associations]
symbol:bhlhe23 "basic helix-loop-helix family,
member e23" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-050913-22
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K09086 eggNOG:NOG308077
OrthoDB:EOG47M1ZW GeneTree:ENSGT00530000063239 HOGENOM:HOG000060094
CTD:128408 HOVERGEN:HBG065837 EMBL:CR407550 EMBL:BC096864
IPI:IPI00502093 RefSeq:NP_001025304.1 UniGene:Dr.44149
Ensembl:ENSDART00000054736 GeneID:559796 KEGG:dre:559796
InParanoid:Q4V9J8 OMA:NESGGEH NextBio:20883141 Uniprot:Q4V9J8
Length = 227
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/110 (61%), Positives = 84/110 (76%)
Query: 52 EHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVI 111
E + F + H G+ L KK+++ +++RL+INARERRRMHDLNDALD LR+VI
Sbjct: 78 ESRKRGAGFDEEKHPGS------LTKKSKEQRSLRLSINARERRRMHDLNDALDGLRSVI 131
Query: 112 PYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
PYAHSPSVRKLSKIATLLLAKNYILMQA ALEE+RR++ Y+ T+T P
Sbjct: 132 PYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLVAYLNQGQTITSP 181
>UNIPROTKB|Q71T10 [details] [associations]
symbol:BHLHE23 "BHLH transcription factor neuroAB"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046671 "negative regulation of retinal cell programmed cell
death" evidence=IEA] [GO:0048050 "post-embryonic eye morphogenesis"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0045944 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0046671 KO:K09086 eggNOG:NOG308077 OrthoDB:EOG47M1ZW
GeneTree:ENSGT00530000063239 HOGENOM:HOG000060094 CTD:128408
HOVERGEN:HBG065837 OMA:LPGCPEK EMBL:AADN02019222 EMBL:AF247675
EMBL:AJ720847 IPI:IPI00586350 RefSeq:NP_989835.1 UniGene:Gga.9502
STRING:Q71T10 Ensembl:ENSGALT00000009175 GeneID:395165
KEGG:gga:395165 InParanoid:Q71T10 NextBio:20815256 Uniprot:Q71T10
Length = 220
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/96 (69%), Positives = 79/96 (82%)
Query: 75 LAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNY 134
L KK ++ +++RL+INARERRRMHDLNDALD LR+VIPYAHSPSVRKLSKIATLLLAKNY
Sbjct: 88 LGKKPKEQRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIATLLLAKNY 147
Query: 135 ILMQANALEELRRIITYIQAQGTMTMPPGFDLQATM 170
ILMQA ALEE+RR++ Y+ QG P L AT+
Sbjct: 148 ILMQAQALEEMRRLVAYLN-QGQALSAP---LPATL 179
>MGI|MGI:2153710 [details] [associations]
symbol:Bhlhe23 "basic helix-loop-helix family, member e23"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046548 "retinal rod cell development"
evidence=IMP] [GO:0046671 "negative regulation of retinal cell
programmed cell death" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048050 "post-embryonic
eye morphogenesis" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:2153710 GO:GO:0005634
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0046671 KO:K09086 eggNOG:NOG308077
OrthoDB:EOG47M1ZW GeneTree:ENSGT00530000063239 HOGENOM:HOG000060094
CTD:128408 OMA:LPGCPEK GO:GO:0048050 EMBL:AF454760 EMBL:AB053118
EMBL:AK044215 EMBL:AK051155 IPI:IPI00308168 RefSeq:NP_542372.2
UniGene:Mm.134062 ProteinModelPortal:Q8BGW3 SMR:Q8BGW3
PhosphoSite:Q8BGW3 PRIDE:Q8BGW3 Ensembl:ENSMUST00000061098
Ensembl:ENSMUST00000108878 GeneID:140489 KEGG:mmu:140489
InParanoid:Q8BGW3 NextBio:369804 Bgee:Q8BGW3 Genevestigator:Q8BGW3
GermOnline:ENSMUSG00000045493 Uniprot:Q8BGW3
Length = 223
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/81 (77%), Positives = 74/81 (91%)
Query: 77 KKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYIL 136
++ R+ +++RL+INARERRRMHDLNDALD LRAVIPYAHSPSVRKLSKIATLLLAKNYIL
Sbjct: 91 RRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYIL 150
Query: 137 MQANALEELRRIITYI-QAQG 156
MQA ALEE+RR++ Y+ Q QG
Sbjct: 151 MQAQALEEMRRLVAYLNQGQG 171
>UNIPROTKB|F1N4A3 [details] [associations]
symbol:BHLHE23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048050 "post-embryonic eye morphogenesis"
evidence=IEA] [GO:0046671 "negative regulation of retinal cell
programmed cell death" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0045944 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0046671 KO:K09086 GeneTree:ENSGT00530000063239 CTD:128408
OMA:LPGCPEK GO:GO:0048050 EMBL:DAAA02036236 IPI:IPI00699315
RefSeq:XP_002692453.1 RefSeq:XP_585626.1 Ensembl:ENSBTAT00000014445
GeneID:539207 KEGG:bta:539207 NextBio:20877847 Uniprot:F1N4A3
Length = 222
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 64/91 (70%), Positives = 76/91 (83%)
Query: 70 GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLL 129
GS ++ R+ +++RL+INARERRRMHDLNDALD LRAVIPYAHSPSVRKLSKIATLL
Sbjct: 84 GSAADGRRRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLL 143
Query: 130 LAKNYILMQANALEELRRIITYIQ-AQGTMT 159
LAKNYILMQA AL+E+RR++ Y+ QG T
Sbjct: 144 LAKNYILMQAQALDEMRRLVAYLNHGQGLAT 174
>RGD|1559760 [details] [associations]
symbol:Bhlhe23 "basic helix-loop-helix family, member e23"
species:10116 "Rattus norvegicus" [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046548 "retinal rod cell development" evidence=ISO]
[GO:0046671 "negative regulation of retinal cell programmed cell
death" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048050 "post-embryonic eye
morphogenesis" evidence=IEA;ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:1559760 GO:GO:0045944
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0046671 KO:K09086
OrthoDB:EOG47M1ZW GeneTree:ENSGT00530000063239 CTD:128408
OMA:LPGCPEK GO:GO:0048050 EMBL:CH474066 IPI:IPI00389966
RefSeq:NP_001102681.1 UniGene:Rn.218533 Ensembl:ENSRNOT00000013690
GeneID:499952 KEGG:rno:499952 UCSC:RGD:1559760 NextBio:704536
Uniprot:D3ZU26
Length = 223
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 61/85 (71%), Positives = 74/85 (87%)
Query: 77 KKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYIL 136
++ R+ +++RL+INARERRRMHDLNDALD LRAVIPYAHSPSVRKLSKIATLLLAKNYIL
Sbjct: 91 RRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYIL 150
Query: 137 MQANALEELRRIITYIQAQGTMTMP 161
MQA ALEE+RR++ Y+ ++ P
Sbjct: 151 MQAQALEEMRRLVAYLNQGQSLAAP 175
>UNIPROTKB|Q8NDY6 [details] [associations]
symbol:BHLHE23 "Class E basic helix-loop-helix protein 23"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046671 "negative
regulation of retinal cell programmed cell death" evidence=IEA]
[GO:0048050 "post-embryonic eye morphogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CH471077
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0046671 KO:K09086 eggNOG:NOG308077
OrthoDB:EOG47M1ZW HOGENOM:HOG000060094 EMBL:AL121673 EMBL:BC137288
EMBL:BC137308 EMBL:BK000274 IPI:IPI00184650 RefSeq:NP_542173.1
UniGene:Hs.551230 ProteinModelPortal:Q8NDY6 SMR:Q8NDY6
STRING:Q8NDY6 PhosphoSite:Q8NDY6 DMDM:74751238 PRIDE:Q8NDY6
Ensembl:ENST00000370346 GeneID:128408 KEGG:hsa:128408
UCSC:uc002yeb.2 CTD:128408 GeneCards:GC20M061637 HGNC:HGNC:16093
HPA:HPA030575 MIM:609331 neXtProt:NX_Q8NDY6 PharmGKB:PA164716615
HOVERGEN:HBG065837 InParanoid:Q8NDY6 OMA:LPGCPEK NextBio:82341
Bgee:Q8NDY6 Genevestigator:Q8NDY6 GermOnline:ENSG00000125533
GO:GO:0048050 Uniprot:Q8NDY6
Length = 225
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 63/88 (71%), Positives = 76/88 (86%)
Query: 70 GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLL 129
GS ++ R+ +++RL+INARERRRMHDLNDALD LRAVIPYAHSPSVRKLSKIATLL
Sbjct: 86 GSAADGRRRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLL 145
Query: 130 LAKNYILMQANALEELRRIITYI-QAQG 156
LAKNYILMQA AL+E+RR++ ++ Q QG
Sbjct: 146 LAKNYILMQAQALDEMRRLVAFLNQGQG 173
>ZFIN|ZDB-GENE-030131-4013 [details] [associations]
symbol:olig2 "oligodendrocyte lineage
transcription factor 2" species:7955 "Danio rerio" [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IMP] [GO:0021514
"ventral spinal cord interneuron differentiation" evidence=IMP]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0021754 "facial
nucleus development" evidence=IMP] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0007400 "neuroblast fate
determination" evidence=IMP] [GO:0007403 "glial cell fate
determination" evidence=IMP] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021742 "abducens nucleus
development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-030131-4013
GO:GO:0001764 GO:GO:0071542 GO:GO:0007400 GO:GO:0050769
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014003 GO:GO:0007403
GO:GO:0021754 GO:GO:0021514 GO:GO:0021520 KO:K09085
HOVERGEN:HBG053370 CTD:10215 EMBL:AF442964 IPI:IPI00510237
RefSeq:NP_835201.1 UniGene:Dr.3920 ProteinModelPortal:Q8QGI4
STRING:Q8QGI4 GeneID:325288 KEGG:dre:325288 InParanoid:Q8QGI4
NextBio:20809220 ArrayExpress:Q8QGI4 GO:GO:0021742 Uniprot:Q8QGI4
Length = 273
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 56/100 (56%), Positives = 77/100 (77%)
Query: 71 SLQPLAKKNR------QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSK 124
+L+ L+KK+R + +++RL IN+RER+RMHDLN A+D LR V+PYAH PSVRKLSK
Sbjct: 63 ALKMLSKKDRKLLSENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSK 122
Query: 125 IATLLLAKNYILMQANALEELRRIITYIQAQGTMTMPPGF 164
IATLLLA+NYILM +N+LEE++R+++ I G+ GF
Sbjct: 123 IATLLLARNYILMLSNSLEEMKRLVSEIYGGGSGAHHAGF 162
>UNIPROTKB|Q13516 [details] [associations]
symbol:OLIG2 "Oligodendrocyte transcription factor 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0045665 GO:GO:0003705 GO:GO:0000122
GO:GO:0021522 GO:GO:0042552 GO:GO:0048714 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0021530 GO:GO:0048663 KO:K09085
HOVERGEN:HBG053370 EMBL:U48250 EMBL:AF221520 EMBL:AK091462
EMBL:BC047511 IPI:IPI00013699 PIR:G02409 RefSeq:NP_005797.1
UniGene:Hs.176977 UniGene:Hs.732068 ProteinModelPortal:Q13516
SMR:Q13516 IntAct:Q13516 STRING:Q13516 PhosphoSite:Q13516
DMDM:22261817 PRIDE:Q13516 Ensembl:ENST00000333337
Ensembl:ENST00000382357 GeneID:10215 KEGG:hsa:10215 UCSC:uc002yqx.2
CTD:10215 GeneCards:GC21P034398 H-InvDB:HIX0016071 HGNC:HGNC:9398
HPA:CAB019381 HPA:HPA003254 MIM:606386 neXtProt:NX_Q13516
PharmGKB:PA31919 eggNOG:NOG313428 HOGENOM:HOG000015765
InParanoid:Q13516 OMA:SFQHWGG OrthoDB:EOG4RJG2Q PhylomeDB:Q13516
GenomeRNAi:10215 NextBio:38678 ArrayExpress:Q13516 Bgee:Q13516
CleanEx:HS_OLIG2 Genevestigator:Q13516 GermOnline:ENSG00000205927
Uniprot:Q13516
Length = 323
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 55/100 (55%), Positives = 72/100 (72%)
Query: 55 SHNSRFQDPTHSGAMGSLQPLAKKNRQGKT--VRLNINARERRRMHDLNDALDELRAVIP 112
S +S T S A S + K+ + + +RL IN+RER+RMHDLN A+D LR V+P
Sbjct: 77 SSSSSTSSSTSSAAASSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMP 136
Query: 113 YAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYI 152
YAH PSVRKLSKIATLLLA+NYILM N+LEE++R+++ I
Sbjct: 137 YAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEI 176
>MGI|MGI:1355331 [details] [associations]
symbol:Olig2 "oligodendrocyte transcription factor 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=IGI] [GO:0021530
"spinal cord oligodendrocyte cell fate specification" evidence=IDA]
[GO:0021794 "thalamus development" evidence=IMP] [GO:0042552
"myelination" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048709 "oligodendrocyte differentiation"
evidence=IMP] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IGI] [GO:0071837 "HMG box domain binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:1355331 GO:GO:0005886 GO:GO:0005737
GO:GO:0003677 GO:GO:0045665 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0021522 GO:GO:0042552 GO:GO:0048714
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021530 GO:GO:0048663
GeneTree:ENSGT00530000063239 KO:K09085 HOVERGEN:HBG053370 CTD:10215
eggNOG:NOG313428 HOGENOM:HOG000015765 OMA:SFQHWGG OrthoDB:EOG4RJG2Q
EMBL:AB038697 EMBL:AF232929 EMBL:BC051967 IPI:IPI00226995
RefSeq:NP_058663.2 UniGene:Mm.37289 ProteinModelPortal:Q9EQW6
SMR:Q9EQW6 IntAct:Q9EQW6 STRING:Q9EQW6 PhosphoSite:Q9EQW6
PRIDE:Q9EQW6 Ensembl:ENSMUST00000035608 GeneID:50913 KEGG:mmu:50913
InParanoid:Q9EQW6 NextBio:307903 Bgee:Q9EQW6 CleanEx:MM_OLIG2
Genevestigator:Q9EQW6 GermOnline:ENSMUSG00000039830 Uniprot:Q9EQW6
Length = 323
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 55/100 (55%), Positives = 72/100 (72%)
Query: 55 SHNSRFQDPTHSGAMGSLQPLAKKNRQGKT--VRLNINARERRRMHDLNDALDELRAVIP 112
S +S T S A S + K+ + + +RL IN+RER+RMHDLN A+D LR V+P
Sbjct: 77 SSSSSTSSSTSSAATSSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMP 136
Query: 113 YAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYI 152
YAH PSVRKLSKIATLLLA+NYILM N+LEE++R+++ I
Sbjct: 137 YAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEI 176
>UNIPROTKB|G3V612 [details] [associations]
symbol:Olig2 "Protein Olig2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEA]
[GO:0021530 "spinal cord oligodendrocyte cell fate specification"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:1307098 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 KO:K09085 CTD:10215 OMA:SFQHWGG
EMBL:CH473989 EMBL:AC112633 RefSeq:NP_001094027.1 UniGene:Rn.22121
Ensembl:ENSRNOT00000000325 GeneID:304103 KEGG:rno:304103
NextBio:652594 Uniprot:G3V612
Length = 323
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 55/100 (55%), Positives = 72/100 (72%)
Query: 55 SHNSRFQDPTHSGAMGSLQPLAKKNRQGKT--VRLNINARERRRMHDLNDALDELRAVIP 112
S +S T S A S + K+ + + +RL IN+RER+RMHDLN A+D LR V+P
Sbjct: 77 SSSSSTSSSTSSAATSSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMP 136
Query: 113 YAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYI 152
YAH PSVRKLSKIATLLLA+NYILM N+LEE++R+++ I
Sbjct: 137 YAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEI 176
>UNIPROTKB|J9P6I6 [details] [associations]
symbol:OLIG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 OMA:SFQHWGG EMBL:AAEX03016492
Ensembl:ENSCAFT00000048514 Uniprot:J9P6I6
Length = 381
Score = 253 (94.1 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 64 THSGAMGSLQPLAKKNRQGKT------VRLNINARERRRMHDLNDALDELRAVIPYAHSP 117
T S A + KK+++ T +RL IN+RER+RMHDLN A+D LR V+PYAH P
Sbjct: 137 TSSSASSAAASSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGP 196
Query: 118 SVRKLSKIATLLLAKNYILMQANALEELRRIITYI 152
SVRKLSKIATLLLA+NYILM N+LEE++R+++ I
Sbjct: 197 SVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEI 231
>UNIPROTKB|Q90XB3 [details] [associations]
symbol:OLIG2 "Oligodendrocyte transcription factor 2"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K09085 EMBL:AF411041
EMBL:AF405699 IPI:IPI00574875 RefSeq:NP_001026697.1
UniGene:Gga.4947 UniGene:Gga.51492 ProteinModelPortal:Q90XB3
PRIDE:Q90XB3 GeneID:428612 KEGG:gga:428612 CTD:167826
HOVERGEN:HBG053370 NextBio:20829555 Uniprot:Q90XB3
Length = 298
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 53/93 (56%), Positives = 70/93 (75%)
Query: 66 SGAMGSLQPLAKKNRQGKT------VRLNINARERRRMHDLNDALDELRAVIPYAHSPSV 119
S A + +KK+++ T +RL IN+RER+RMHDLN A+D LR V+PYAH PSV
Sbjct: 82 SSASSASSASSKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSV 141
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRIITYI 152
RKLSKIATLLLA+NYILM N+LEE++R+++ I
Sbjct: 142 RKLSKIATLLLARNYILMLTNSLEEMKRLVSEI 174
>WB|WBGene00013665 [details] [associations]
symbol:hlh-32 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0018991
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG308077
GeneTree:ENSGT00530000063239 EMBL:AL110479 HOGENOM:HOG000020080
RefSeq:NP_001023430.1 ProteinModelPortal:Q7YWS9 SMR:Q7YWS9
EnsemblMetazoa:Y105C5B.29 GeneID:3565279 KEGG:cel:CELE_Y105C5B.29
UCSC:Y105C5B.29 CTD:3565279 WormBase:Y105C5B.29 InParanoid:Q7YWS9
OMA:ISYTEPG NextBio:955875 Uniprot:Q7YWS9
Length = 105
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 50/71 (70%), Positives = 62/71 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
VRL+IN RER RMHDLN+ALD+LRAVIPYAH SVRKLSKIATLLLAKN+I+MQA A+EE
Sbjct: 15 VRLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEE 74
Query: 145 LRRIITYIQAQ 155
L +++ ++ +
Sbjct: 75 LSVLVSQLKTR 85
>WB|WBGene00001961 [details] [associations]
symbol:hlh-17 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0018991
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG308077
GeneTree:ENSGT00530000063239 EMBL:Z82267 RefSeq:NP_502928.3
ProteinModelPortal:O45489 SMR:O45489 STRING:O45489
EnsemblMetazoa:F38C2.2 GeneID:185460 KEGG:cel:CELE_F38C2.2
UCSC:F38C2.2 CTD:185460 WormBase:F38C2.2 HOGENOM:HOG000020080
InParanoid:O45489 OMA:KMSSTEP NextBio:928364 Uniprot:O45489
Length = 101
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 50/69 (72%), Positives = 61/69 (88%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
VRL+IN RER RMHDLN+ALD+LRAVIPYAH SVRKLSKIATLLLAKN+I+MQA A+EE
Sbjct: 15 VRLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEE 74
Query: 145 LRRIITYIQ 153
L +++ ++
Sbjct: 75 LSILVSQLK 83
>UNIPROTKB|E1BZ57 [details] [associations]
symbol:LOC100857919 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 KO:K09085 NextBio:20829555 OMA:VQKMPGE
EMBL:AADN02025499 IPI:IPI00811304 RefSeq:XP_003640968.1
Ensembl:ENSGALT00000022484 GeneID:100857919 KEGG:gga:100857919
Uniprot:E1BZ57
Length = 273
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 50/88 (56%), Positives = 65/88 (73%)
Query: 63 PTHSGAMGSLQPLAKKNRQG-KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRK 121
P G G + + + Q + +RL IN RER+RMHDLN A+D LR V+PYAH PSVRK
Sbjct: 62 PKAQGEGGKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRK 121
Query: 122 LSKIATLLLAKNYILMQANALEELRRII 149
LSKIATLLLA+NYILM ++LEE++R++
Sbjct: 122 LSKIATLLLARNYILMLTSSLEEMKRLV 149
>UNIPROTKB|G3MYF1 [details] [associations]
symbol:OLIG3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00530000063239
KO:K09085 CTD:167826 OMA:VQKMPGE EMBL:DAAA02026752
RefSeq:XP_002690318.1 RefSeq:XP_610701.2 Ensembl:ENSBTAT00000011527
GeneID:532191 KEGG:bta:532191 NextBio:20875627 Uniprot:G3MYF1
Length = 272
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/65 (70%), Positives = 57/65 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIATLLLA+NYILM ++LEE
Sbjct: 84 LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEE 143
Query: 145 LRRII 149
++R++
Sbjct: 144 MKRLV 148
>UNIPROTKB|E2QYV0 [details] [associations]
symbol:OLIG3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 KO:K09085 CTD:167826 OMA:VQKMPGE
EMBL:AAEX03000196 RefSeq:XP_541122.1 Ensembl:ENSCAFT00000000416
GeneID:484005 KEGG:cfa:484005 NextBio:20858278 Uniprot:E2QYV0
Length = 272
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/65 (70%), Positives = 57/65 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIATLLLA+NYILM ++LEE
Sbjct: 84 LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEE 143
Query: 145 LRRII 149
++R++
Sbjct: 144 MKRLV 148
>UNIPROTKB|Q7RTU3 [details] [associations]
symbol:OLIG3 "Oligodendrocyte transcription factor 3"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K09085 CTD:167826
HOVERGEN:HBG053370 eggNOG:NOG313428 HOGENOM:HOG000015765
OrthoDB:EOG4RJG2Q EMBL:AK096362 EMBL:AL023580 EMBL:BC051352
EMBL:BK000141 IPI:IPI00167528 RefSeq:NP_786923.1 UniGene:Hs.195398
ProteinModelPortal:Q7RTU3 SMR:Q7RTU3 STRING:Q7RTU3
PhosphoSite:Q7RTU3 DMDM:51701664 PRIDE:Q7RTU3 DNASU:167826
Ensembl:ENST00000367734 GeneID:167826 KEGG:hsa:167826
UCSC:uc003qhp.1 GeneCards:GC06M137855 HGNC:HGNC:18003 HPA:CAB024865
HPA:HPA018303 MIM:609323 neXtProt:NX_Q7RTU3 PharmGKB:PA134945348
InParanoid:Q7RTU3 OMA:VQKMPGE PhylomeDB:Q7RTU3 GenomeRNAi:167826
NextBio:88689 Bgee:Q7RTU3 CleanEx:HS_OLIG3 Genevestigator:Q7RTU3
GermOnline:ENSG00000177468 Uniprot:Q7RTU3
Length = 272
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/65 (70%), Positives = 57/65 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIATLLLA+NYILM ++LEE
Sbjct: 84 LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEE 143
Query: 145 LRRII 149
++R++
Sbjct: 144 MKRLV 148
>UNIPROTKB|F1S693 [details] [associations]
symbol:OLIG3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00530000063239
KO:K09085 OMA:VQKMPGE EMBL:CU302262 RefSeq:XP_001928671.1
Ensembl:ENSSSCT00000004593 GeneID:100153431 KEGG:ssc:100153431
Uniprot:F1S693
Length = 272
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/65 (70%), Positives = 57/65 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIATLLLA+NYILM ++LEE
Sbjct: 84 LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEE 143
Query: 145 LRRII 149
++R++
Sbjct: 144 MKRLV 148
>MGI|MGI:2149955 [details] [associations]
symbol:Olig3 "oligodendrocyte transcription factor 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:2149955 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 KO:K09085 CTD:167826
HOVERGEN:HBG053370 eggNOG:NOG313428 HOGENOM:HOG000015765
OrthoDB:EOG4RJG2Q OMA:VQKMPGE EMBL:AB038698 EMBL:BC057564
IPI:IPI00461842 RefSeq:NP_443734.2 UniGene:Mm.156946
ProteinModelPortal:Q6PFG8 SMR:Q6PFG8 STRING:Q6PFG8
PhosphoSite:Q6PFG8 PRIDE:Q6PFG8 Ensembl:ENSMUST00000053225
GeneID:94222 KEGG:mmu:94222 UCSC:uc007ene.1 InParanoid:Q6PFG8
NextBio:352215 Bgee:Q6PFG8 CleanEx:MM_OLIG3 Genevestigator:Q6PFG8
GermOnline:ENSMUSG00000045591 Uniprot:Q6PFG8
Length = 273
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/65 (70%), Positives = 57/65 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIATLLLA+NYILM ++LEE
Sbjct: 85 LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEE 144
Query: 145 LRRII 149
++R++
Sbjct: 145 MKRLV 149
>RGD|1305997 [details] [associations]
symbol:Olig3 "oligodendrocyte transcription factor 3"
species:10116 "Rattus norvegicus" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:1305997 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00530000063239 KO:K09085 CTD:167826
OrthoDB:EOG4RJG2Q OMA:VQKMPGE EMBL:CH473994 IPI:IPI00367869
RefSeq:NP_001099739.1 UniGene:Rn.140572 Ensembl:ENSRNOT00000016048
GeneID:293012 KEGG:rno:293012 UCSC:RGD:1305997 NextBio:635170
Uniprot:D4A572
Length = 273
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/65 (70%), Positives = 57/65 (87%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIATLLLA+NYILM ++LEE
Sbjct: 85 LRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEE 144
Query: 145 LRRII 149
++R++
Sbjct: 145 MKRLV 149
>ZFIN|ZDB-GENE-080903-1 [details] [associations]
symbol:olig3 "oligodendrocyte transcription factor 3"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-080903-1
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00530000063239
KO:K09085 CTD:167826 HOVERGEN:HBG053370 eggNOG:NOG313428
HOGENOM:HOG000015765 OrthoDB:EOG4RJG2Q OMA:VQKMPGE
EMBL:CABZ01057816 EMBL:CU693457 EMBL:BC154834 IPI:IPI00612442
RefSeq:NP_001103863.1 UniGene:Dr.77024 STRING:A8WGS8
Ensembl:ENSDART00000111052 GeneID:566728 KEGG:dre:566728
NextBio:20888343 Uniprot:A8WGS8
Length = 255
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 70 GSLQPLAKK--NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIAT 127
GS L K+ ++ + +RL IN RER+RMHDLN A+D LR V+PYAH PSVRKLSKIAT
Sbjct: 58 GSKYKLKKQVTEQEIQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIAT 117
Query: 128 LLLAKNYILMQANALEELRRII 149
LLLA+NYILM ++L+E++R++
Sbjct: 118 LLLARNYILMLTSSLDEMKRLV 139
>ZFIN|ZDB-GENE-030131-3580 [details] [associations]
symbol:olig4 "oligodendrocyte transcription factor
4" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0045664 "regulation of neuron
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-030131-3580
GO:GO:0045664 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 HOVERGEN:HBG053370 eggNOG:NOG313428
HOGENOM:HOG000015765 EMBL:BX936305 EMBL:BC092917 EMBL:AJ488293
EMBL:BN001115 IPI:IPI00497718 RefSeq:NP_955808.1 UniGene:Dr.117660
Ensembl:ENSDART00000074499 GeneID:324857 KEGG:dre:324857 CTD:324857
InParanoid:Q5K548 OMA:FSNKMFQ OrthoDB:EOG4QC16J NextBio:20808998
Uniprot:Q5K548
Length = 244
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 54/113 (47%), Positives = 76/113 (67%)
Query: 65 HSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSK 124
++G + L+K + Q +RL +N+RER+RMHDLN A+D LR V+PYA PSVRKLSK
Sbjct: 46 NAGKTRTRADLSKDDLQD--LRLKVNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSK 103
Query: 125 IATLLLAKNYILMQANALEELRRII--TY-IQAQG---TMTMPPGFDLQATML 171
I+TLLLA+NYILM +++LEE+++++ Y AQ +PP AT L
Sbjct: 104 ISTLLLARNYILMLSSSLEEMKKLVGDVYGANAQSHSARRVLPPTSAAPATQL 156
>WB|WBGene00009540 [details] [associations]
symbol:hlh-31 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0018991
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG308077
GeneTree:ENSGT00530000063239 EMBL:Z82267 RefSeq:NP_001023193.2
UniGene:Cel.34658 ProteinModelPortal:Q86D08 SMR:Q86D08
EnsemblMetazoa:F38C2.8 GeneID:3565632 KEGG:cel:CELE_F38C2.8
UCSC:F38C2.8 CTD:3565632 WormBase:F38C2.8 InParanoid:Q86D08
NextBio:957233 Uniprot:Q86D08
Length = 164
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 47/98 (47%), Positives = 69/98 (70%)
Query: 57 NSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERR-RMHDLNDALDELRAVIPYAH 115
N ++ + G+ L L K+ + + ++ + +R RMHDLN+ALD+LRAVIPYAH
Sbjct: 46 NEKYMAQSGLGSQVKLSGLLSKDGKLSSRKMKSSKLLKRCRMHDLNEALDDLRAVIPYAH 105
Query: 116 SPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQ 153
SVRKLSKIATLLLAKN+I+M+A A+EEL +++ ++
Sbjct: 106 GGSVRKLSKIATLLLAKNHIIMKAKAIEELSVLVSQLK 143
>UNIPROTKB|Q8TAK6 [details] [associations]
symbol:OLIG1 "Oligodendrocyte transcription factor 1"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048663 EMBL:AL834450 EMBL:AP000289 EMBL:BC026989
EMBL:BC033290 EMBL:BK000278 IPI:IPI00152068 RefSeq:NP_620450.2
UniGene:Hs.56663 ProteinModelPortal:Q8TAK6 SMR:Q8TAK6 IntAct:Q8TAK6
STRING:Q8TAK6 PhosphoSite:Q8TAK6 DMDM:22653884 PRIDE:Q8TAK6
DNASU:116448 Ensembl:ENST00000333063 Ensembl:ENST00000382348
GeneID:116448 KEGG:hsa:116448 UCSC:uc002yqz.3 CTD:116448
GeneCards:GC21P034442 HGNC:HGNC:16983 HPA:CAB025474 MIM:606385
neXtProt:NX_Q8TAK6 PharmGKB:PA31918 eggNOG:NOG256163
HOVERGEN:HBG053369 InParanoid:Q8TAK6 KO:K09085 OMA:MYYAVSQ
OrthoDB:EOG4BP1CW PhylomeDB:Q8TAK6 GenomeRNAi:116448 NextBio:79933
ArrayExpress:Q8TAK6 Bgee:Q8TAK6 CleanEx:HS_OLIG1
Genevestigator:Q8TAK6 GermOnline:ENSG00000184221 Uniprot:Q8TAK6
Length = 271
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 50/90 (55%), Positives = 64/90 (71%)
Query: 65 HSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVI-PY--AHSPSV-- 119
H G GS +P AK+ +Q + +R IN+RER+RM DLN A+D LR VI PY AH
Sbjct: 89 HPG--GSARPDAKEEQQ-QQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPG 145
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRII 149
RKLSKIATLLLA+NYIL+ ++L+ELRR +
Sbjct: 146 RKLSKIATLLLARNYILLLGSSLQELRRAL 175
>UNIPROTKB|F1N3Q1 [details] [associations]
symbol:OLIG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048663
GeneTree:ENSGT00530000063239 OMA:MYYAVSQ EMBL:DAAA02000038
IPI:IPI01000730 Ensembl:ENSBTAT00000054480 Uniprot:F1N3Q1
Length = 277
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 49/90 (54%), Positives = 61/90 (67%)
Query: 66 SGAMGSLQPLAK-KNRQGKTVRLNINARERRRMHDLNDALDELRAVI-PY--AHSPSV-- 119
+GA P A K Q + +R IN+RER+RMHDLN A+D LR VI PY AH
Sbjct: 88 TGAHAGGGPRADAKEEQQQQLRRKINSRERKRMHDLNLAMDALREVILPYSAAHCQGAPG 147
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRII 149
RKLSKIATLLLA+NYIL+ ++L+ELRR +
Sbjct: 148 RKLSKIATLLLARNYILLLGSSLQELRRAL 177
>UNIPROTKB|F1SGZ6 [details] [associations]
symbol:OLIG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048663
GeneTree:ENSGT00530000063239 OMA:MYYAVSQ EMBL:CU914227
Ensembl:ENSSSCT00000013172 Uniprot:F1SGZ6
Length = 280
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 49/90 (54%), Positives = 64/90 (71%)
Query: 65 HSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVI-PY--AHSPSV-- 119
H+G GS + AK+ +Q + +R IN+RER+RM DLN A+D LR VI PY AH
Sbjct: 94 HTG--GSSRADAKEEQQ-QQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPG 150
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRII 149
RKLSKIATLLLA+NYIL+ ++L+ELRR +
Sbjct: 151 RKLSKIATLLLARNYILLLGSSLQELRRAL 180
>MGI|MGI:1355334 [details] [associations]
symbol:Olig1 "oligodendrocyte transcription factor 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:1355334 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048663
GeneTree:ENSGT00530000063239 CTD:116448 eggNOG:NOG256163
HOVERGEN:HBG053369 KO:K09085 OMA:MYYAVSQ OrthoDB:EOG4BP1CW
EMBL:AB038696 EMBL:BC046316 EMBL:AF232928 IPI:IPI00123208
RefSeq:NP_058664.2 UniGene:Mm.39300 ProteinModelPortal:Q9JKN5
SMR:Q9JKN5 IntAct:Q9JKN5 STRING:Q9JKN5 PhosphoSite:Q9JKN5
PRIDE:Q9JKN5 Ensembl:ENSMUST00000056882 GeneID:50914 KEGG:mmu:50914
HOGENOM:HOG000015810 InParanoid:Q9JKN5 NextBio:307907 Bgee:Q9JKN5
CleanEx:MM_OLIG1 Genevestigator:Q9JKN5
GermOnline:ENSMUSG00000046160 Uniprot:Q9JKN5
Length = 260
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 70 GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVI-PY--AHSPSV--RKLSK 124
G + AK+ +Q + +R IN+RER+RM DLN A+D LR VI PY AH RKLSK
Sbjct: 80 GGARADAKEEQQQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSK 139
Query: 125 IATLLLAKNYILMQANALEELRRII 149
IATLLLA+NYIL+ ++L+ELRR +
Sbjct: 140 IATLLLARNYILLLGSSLQELRRAL 164
>RGD|621129 [details] [associations]
symbol:Olig1 "oligodendrocyte transcription factor 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA;ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:621129 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048663
GeneTree:ENSGT00530000063239 CTD:116448 eggNOG:NOG256163
HOVERGEN:HBG053369 KO:K09085 OMA:MYYAVSQ OrthoDB:EOG4BP1CW
HOGENOM:HOG000015810 EMBL:AF151367 IPI:IPI00204269
RefSeq:NP_068538.2 UniGene:Rn.45339 ProteinModelPortal:Q9WUQ3
STRING:Q9WUQ3 PRIDE:Q9WUQ3 Ensembl:ENSRNOT00000002827 GeneID:60394
KEGG:rno:60394 UCSC:RGD:621129 InParanoid:Q9WUQ3 NextBio:612096
Genevestigator:Q9WUQ3 GermOnline:ENSRNOG00000028648 Uniprot:Q9WUQ3
Length = 261
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 70 GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVI-PY--AHSPSV--RKLSK 124
G + AK+ +Q + +R IN+RER+RM DLN A+D LR VI PY AH RKLSK
Sbjct: 81 GGARADAKEEQQQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSK 140
Query: 125 IATLLLAKNYILMQANALEELRRII 149
IATLLLA+NYIL+ ++L+ELRR +
Sbjct: 141 IATLLLARNYILLLGSSLQELRRAL 165
>UNIPROTKB|J9P7L0 [details] [associations]
symbol:OLIG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00530000063239 EMBL:AAEX03016492
Ensembl:ENSCAFT00000045601 Uniprot:J9P7L0
Length = 386
Score = 189 (71.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/90 (52%), Positives = 59/90 (65%)
Query: 65 HSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVI-PY--AHSPSV-- 119
H+G P K Q + +R IN+RER+RM DLN A+D LR VI PY AH
Sbjct: 92 HAGGGSRADP---KEEQQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPG 148
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRII 149
RKLSKIATLLLA+NYIL+ ++L+ELRR +
Sbjct: 149 RKLSKIATLLLARNYILLLGSSLQELRRAL 178
>WB|WBGene00001960 [details] [associations]
symbol:hlh-16 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00530000063239
EMBL:Z96047 RefSeq:NP_492372.2 ProteinModelPortal:O45320 SMR:O45320
EnsemblMetazoa:DY3.3 GeneID:183973 KEGG:cel:CELE_DY3.3 UCSC:DY3.3
CTD:183973 WormBase:DY3.3 eggNOG:NOG280904 HOGENOM:HOG000019624
OMA:MHELNDE Uniprot:O45320
Length = 146
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 64 THSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLS 123
+ +G +Q L ++ + +R +IN+RERRRMH+LND + LR +PY + + R++S
Sbjct: 22 SEAGGRKKMQGLNEQEQN--LLRNSINSRERRRMHELNDEFETLRECLPYPNEANSRRMS 79
Query: 124 KIATLLLAKNYILMQANALEELRRIITYIQAQ 155
K TLLLA N+I ANA +L+ + A+
Sbjct: 80 KANTLLLASNWIKQLANANHKLQMELNMANAK 111
>ZFIN|ZDB-GENE-050107-2 [details] [associations]
symbol:olig1 "oligodendrocyte lineage transcription
factor 1" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0014003 "oligodendrocyte
development" evidence=IGI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-050107-2 GO:GO:0003700 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0014003 CTD:116448 HOVERGEN:HBG053369
KO:K09085 EMBL:AY327628 IPI:IPI00833630 RefSeq:NP_001018632.1
UniGene:Dr.46389 ProteinModelPortal:Q5QJR2 STRING:Q5QJR2
GeneID:100001484 KEGG:dre:100001484 InParanoid:Q5QJR2
NextBio:20785057 Uniprot:Q5QJR2
Length = 235
Score = 102 (41.0 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 71 SLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAV-IPYAHSPS 118
S P + + + +R IN+RER+RM DLN A+D LR V +PY+ SP+
Sbjct: 47 SKPPRELSSEEQQELRRKINSRERKRMQDLNVAMDALREVMVPYSSSPT 95
Score = 95 (38.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 17/30 (56%), Positives = 28/30 (93%)
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRII 149
R+LSKI+TL+LA+NYIL+ ++L+E+RR++
Sbjct: 115 RRLSKISTLVLARNYILLLGSSLQEMRRLL 144
>FB|FBgn0023091 [details] [associations]
symbol:dimm "dimmed" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046887
"positive regulation of hormone secretion" evidence=IMP]
[GO:0002793 "positive regulation of peptide secretion"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 EMBL:AE014134 GO:GO:0003677 GO:GO:0045944
GO:GO:0002793 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 eggNOG:NOG299224 GO:GO:0046887
EMBL:BT028819 EMBL:BT028851 RefSeq:NP_523611.1
ProteinModelPortal:B6VQA1 SMR:B6VQA1 IntAct:B6VQA1 MINT:MINT-327290
STRING:B6VQA1 EnsemblMetazoa:FBtr0081514 EnsemblMetazoa:FBtr0333354
GeneID:35404 KEGG:dme:Dmel_CG8667 CTD:35404 FlyBase:FBgn0023091
InParanoid:B6VQA1 OMA:HVEMERR OrthoDB:EOG47PVPF PhylomeDB:B6VQA1
GenomeRNAi:35404 NextBio:793353 Bgee:B6VQA1 Uniprot:B6VQA1
Length = 390
Score = 158 (60.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 38/88 (43%), Positives = 50/88 (56%)
Query: 50 CPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVR-LNINARERRRMHDLNDALDELR 108
CP ++ NS + +++ S + N + + +R L N RER RMH LNDA LR
Sbjct: 121 CPSTIAPNSTSSNSSNANGNASRRRKGALNAKERNMRRLESNERERMRMHSLNDAFQSLR 180
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYIL 136
VIP H R+LSKI TL LAKNYI+
Sbjct: 181 EVIP--HVEMERRLSKIETLTLAKNYII 206
>UNIPROTKB|E1BLE3 [details] [associations]
symbol:NEUROD2 "Neurogenic differentiation factor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:2000297 "negative regulation of synapse maturation"
evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0071277 "cellular response to calcium
ion" evidence=IEA] [GO:0071257 "cellular response to electrical
stimulus" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0050850 "positive
regulation of calcium-mediated signaling" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0031915
"positive regulation of synaptic plasticity" evidence=IEA]
[GO:0021695 "cerebellar cortex development" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003714 GO:GO:0051091
GO:GO:0071277 GO:GO:0050850 GO:GO:0006351 GO:GO:0016567
GO:GO:0048666 GO:GO:0008306 GO:GO:0045666 GO:GO:0021695
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001662 GO:GO:0090129
GO:GO:0031915 GO:GO:2000297 GO:GO:0070888 GO:GO:0071257
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
InterPro:IPR016637 PIRSF:PIRSF015618 CTD:4761 KO:K09078 OMA:CINGNFS
EMBL:DAAA02049119 IPI:IPI00716088 RefSeq:NP_001192887.1
UniGene:Bt.69674 Ensembl:ENSBTAT00000005381 GeneID:528817
KEGG:bta:528817 NextBio:20874906 Uniprot:E1BLE3
Length = 382
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 81 QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140
+ K R NARER RMHDLN ALD LR V+P +S + +KLSKI TL LAKNYI +
Sbjct: 118 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSE 175
Query: 141 ALEELRR--IITYIQ 153
L +R +++Y+Q
Sbjct: 176 ILRSGKRPDLVSYVQ 190
>UNIPROTKB|E2R9M5 [details] [associations]
symbol:NEUROD2 "Neurogenic differentiation factor"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:2000297 "negative regulation of synapse
maturation" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] [GO:0071277 "cellular response to
calcium ion" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0050850 "positive regulation of calcium-mediated signaling"
evidence=IEA] [GO:0048666 "neuron development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0021695 "cerebellar cortex
development" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008306 "associative learning" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003714 GO:GO:0051091 GO:GO:0071277 GO:GO:0050850
GO:GO:0006351 GO:GO:0016567 GO:GO:0048666 GO:GO:0008306
GO:GO:0045666 GO:GO:0021695 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001662 GO:GO:0090129 GO:GO:0031915 GO:GO:2000297
GO:GO:0070888 GO:GO:0071257 GeneTree:ENSGT00680000099860
InterPro:IPR022575 Pfam:PF12533 InterPro:IPR016637
PIRSF:PIRSF015618 CTD:4761 KO:K09078 OMA:CINGNFS EMBL:AAEX03006473
RefSeq:XP_548146.1 Ensembl:ENSCAFT00000026005 GeneID:491026
KEGG:cfa:491026 NextBio:20863930 Uniprot:E2R9M5
Length = 382
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 81 QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140
+ K R NARER RMHDLN ALD LR V+P +S + +KLSKI TL LAKNYI +
Sbjct: 118 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSE 175
Query: 141 ALEELRR--IITYIQ 153
L +R +++Y+Q
Sbjct: 176 ILRSGKRPDLVSYVQ 190
>UNIPROTKB|Q15784 [details] [associations]
symbol:NEUROD2 "Neurogenic differentiation factor 2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0008306 "associative learning" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0021695 "cerebellar cortex
development" evidence=ISS] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISS] [GO:0050850 "positive
regulation of calcium-mediated signaling" evidence=ISS] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0071277 "cellular response to
calcium ion" evidence=ISS] [GO:0090129 "positive regulation of
synapse maturation" evidence=ISS] [GO:2000297 "negative regulation
of synapse maturation" evidence=ISS] [GO:0071257 "cellular response
to electrical stimulus" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0070888 "E-box
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003714 GO:GO:0051091
GO:GO:0071277 GO:GO:0050850 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 GO:GO:0016567 GO:GO:0048666 GO:GO:0008306
GO:GO:0046982 GO:GO:0045666 GO:GO:0021695 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001662 GO:GO:0090129 GO:GO:0031915
GO:GO:2000297 GO:GO:0070888 GO:GO:0071257 InterPro:IPR022575
Pfam:PF12533 eggNOG:NOG268401 HOGENOM:HOG000049256
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618 CTD:4761
KO:K09078 OrthoDB:EOG4QC162 EMBL:U58681 EMBL:AB021742 EMBL:BC022481
IPI:IPI00302045 PIR:G02668 RefSeq:NP_006151.3 UniGene:Hs.322431
ProteinModelPortal:Q15784 SMR:Q15784 STRING:Q15784
PhosphoSite:Q15784 DMDM:6226655 PaxDb:Q15784 PRIDE:Q15784
DNASU:4761 Ensembl:ENST00000302584 GeneID:4761 KEGG:hsa:4761
UCSC:uc002hry.3 GeneCards:GC17M037760 HGNC:HGNC:7763 MIM:601725
neXtProt:NX_Q15784 PharmGKB:PA31565 InParanoid:Q15784 OMA:CINGNFS
PhylomeDB:Q15784 GenomeRNAi:4761 NextBio:18340 Bgee:Q15784
CleanEx:HS_NEUROD2 Genevestigator:Q15784 GermOnline:ENSG00000171532
Uniprot:Q15784
Length = 382
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 81 QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140
+ K R NARER RMHDLN ALD LR V+P +S + +KLSKI TL LAKNYI +
Sbjct: 118 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSE 175
Query: 141 ALEELRR--IITYIQ 153
L +R +++Y+Q
Sbjct: 176 ILRSGKRPDLVSYVQ 190
>RGD|3166 [details] [associations]
symbol:Neurod2 "neuronal differentiation 2" species:10116 "Rattus
norvegicus" [GO:0001662 "behavioral fear response" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008306 "associative learning" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISS] [GO:0021695
"cerebellar cortex development" evidence=ISO;ISS] [GO:0031915
"positive regulation of synaptic plasticity" evidence=ISO;ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO;ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;ISS] [GO:0048666 "neuron development" evidence=ISO]
[GO:0050850 "positive regulation of calcium-mediated signaling"
evidence=ISO;ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0070888 "E-box binding" evidence=ISO;ISS]
[GO:0071257 "cellular response to electrical stimulus"
evidence=ISO;ISS] [GO:0071277 "cellular response to calcium ion"
evidence=ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISO;ISS] [GO:2000297 "negative regulation of
synapse maturation" evidence=ISO;ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:3166 GO:GO:0005634 GO:GO:0003714
GO:GO:0051091 GO:GO:0071277 GO:GO:0050850 GO:GO:0006351 GO:GO:0016567
GO:GO:0046982 GO:GO:0045666 GO:GO:0021695 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0090129 GO:GO:0031915 GO:GO:2000297
GO:GO:0070888 GO:GO:0071257 InterPro:IPR022575 Pfam:PF12533
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618 CTD:4761
KO:K09078 EMBL:D82868 IPI:IPI00211118 PIR:JC4647 RefSeq:NP_062199.1
UniGene:Rn.10724 ProteinModelPortal:Q63689 PRIDE:Q63689 GeneID:54276
KEGG:rno:54276 UCSC:RGD:3166 NextBio:610840 Genevestigator:Q63689
Uniprot:Q63689
Length = 382
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 81 QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140
+ K R NARER RMHDLN ALD LR V+P +S + +KLSKI TL LAKNYI +
Sbjct: 118 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSE 175
Query: 141 ALEELRR--IITYIQ 153
L +R +++Y+Q
Sbjct: 176 ILRSGKRPDLVSYVQ 190
>MGI|MGI:107755 [details] [associations]
symbol:Neurod2 "neurogenic differentiation 2" species:10090
"Mus musculus" [GO:0001662 "behavioral fear response" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0008306
"associative learning" evidence=IMP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0021695 "cerebellar cortex
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IDA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050850 "positive regulation of
calcium-mediated signaling" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0070888 "E-box binding" evidence=IDA]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IDA] [GO:0071277 "cellular response to calcium ion"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IMP] [GO:2000297 "negative regulation of
synapse maturation" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:107755 GO:GO:0005634
GO:GO:0003714 GO:GO:0051091 GO:GO:0071277 GO:GO:0050850
GO:GO:0006351 GO:GO:0016567 GO:GO:0048666 GO:GO:0008306
GO:GO:0046982 GO:GO:0045666 GO:GO:0021695 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001662 GO:GO:0090129 GO:GO:0031915
GO:GO:2000297 GO:GO:0070888 GO:GO:0071257
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
eggNOG:NOG268401 HOGENOM:HOG000049256 HOVERGEN:HBG000250
InterPro:IPR016637 PIRSF:PIRSF015618 CTD:4761 KO:K09078
OrthoDB:EOG4QC162 OMA:CINGNFS EMBL:U58471 EMBL:D83507 EMBL:AB027126
EMBL:BC058965 IPI:IPI00312748 PIR:JC4688 RefSeq:NP_035025.3
UniGene:Mm.4814 ProteinModelPortal:Q62414 SMR:Q62414 STRING:Q62414
PhosphoSite:Q62414 PRIDE:Q62414 Ensembl:ENSMUST00000041685
GeneID:18013 KEGG:mmu:18013 InParanoid:Q62414 ChiTaRS:NEUROD2
NextBio:293041 Bgee:Q62414 CleanEx:MM_NEUROD2 Genevestigator:Q62414
GermOnline:ENSMUSG00000038255 Uniprot:Q62414
Length = 383
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 81 QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140
+ K R NARER RMHDLN ALD LR V+P +S + +KLSKI TL LAKNYI +
Sbjct: 119 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSE 176
Query: 141 ALEELRR--IITYIQ 153
L +R +++Y+Q
Sbjct: 177 ILRSGKRPDLVSYVQ 191
>ZFIN|ZDB-GENE-010608-1 [details] [associations]
symbol:neurod6a "neurogenic differentiation 6a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-010608-1 GO:GO:0050769
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099860
InterPro:IPR022575 Pfam:PF12533 InterPro:IPR016637
PIRSF:PIRSF015618 EMBL:CU138525 EMBL:CU468032 IPI:IPI00934077
Ensembl:ENSDART00000098859 ArrayExpress:F1QES9 Bgee:F1QES9
Uniprot:F1QES9
Length = 391
Score = 155 (59.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/93 (44%), Positives = 55/93 (59%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G A+ +R K R+ NARER RMH LN+ALD LR V+P +S + +KL
Sbjct: 132 PRRRGPRKKKMTKARVDRV-KVRRMEANARERNRMHGLNNALDSLRKVVP-CYSKT-QKL 188
Query: 123 SKIATLLLAKNYILMQANALEELRR--IITYIQ 153
SKI TL LAKNYI + L +R ++T++Q
Sbjct: 189 SKIETLRLAKNYIWALSEILSTGKRPDLLTFVQ 221
>UNIPROTKB|Q91616 [details] [associations]
symbol:neurod1 "Neurogenic differentiation factor 1"
species:8355 "Xenopus laevis" [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR022575 Pfam:PF12533 HOVERGEN:HBG000250
InterPro:IPR016637 PIRSF:PIRSF015618 EMBL:U28067 PIR:I51687
RefSeq:NP_001079263.1 UniGene:Xl.330 ProteinModelPortal:Q91616
GeneID:378541 KEGG:xla:378541 CTD:378541 Xenbase:XB-GENE-6252655
Uniprot:Q91616
Length = 352
Score = 154 (59.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/95 (43%), Positives = 54/95 (56%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
Q P G A+ R K R+ NARER RMH LNDALD LR V+P +S + +
Sbjct: 80 QKPKRRGPKKKKMTKARVERF-KVRRMKANARERNRMHGLNDALDSLRKVVP-CYSKT-Q 136
Query: 121 KLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
KLSKI TL LAKNYI + L + +++++Q
Sbjct: 137 KLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 171
>ZFIN|ZDB-GENE-010608-3 [details] [associations]
symbol:neurod2 "neurogenic differentiation 2"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-010608-3 GO:GO:0005634
GO:GO:0007399 GO:GO:0030154 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR022575
Pfam:PF12533 eggNOG:NOG268401 HOGENOM:HOG000049256
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618
EMBL:AF115774 IPI:IPI00487996 RefSeq:NP_571157.1 UniGene:Dr.32478
ProteinModelPortal:Q9W6C8 GeneID:114435 KEGG:dre:114435 CTD:4761
InParanoid:Q9W6C8 KO:K09078 OrthoDB:EOG4QC162 NextBio:20796922
ArrayExpress:Q9W6C8 Uniprot:Q9W6C8
Length = 363
Score = 152 (58.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 81 QGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAN 140
+ K R NARER RMHDLN ALD L V+P +S + +KLSKI TL LAKNYI +
Sbjct: 104 RSKVRRQKANARERTRMHDLNSALDNLLKVVP-CYSKT-QKLSKIETLRLAKNYIWALSE 161
Query: 141 ALEELRR--IITYIQ 153
L +R +++Y+Q
Sbjct: 162 ILRNGKRPDVVSYVQ 176
>UNIPROTKB|E1C3F4 [details] [associations]
symbol:NEUROD6 "Neurogenic differentiation factor"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099860
InterPro:IPR022575 Pfam:PF12533 InterPro:IPR016637
PIRSF:PIRSF015618 CTD:63974 KO:K09080 OMA:LPTESHF EMBL:AADN02001381
IPI:IPI00599317 RefSeq:XP_418852.1 Ensembl:ENSGALT00000019978
GeneID:420754 KEGG:gga:420754 NextBio:20823627 Uniprot:E1C3F4
Length = 337
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R NARER RMH LNDALD LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 96 RQEANARERNRMHGLNDALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRIG 153
Query: 146 RR--IITYIQ 153
+R ++T++Q
Sbjct: 154 KRPDLLTFVQ 163
>UNIPROTKB|Q08DI0 [details] [associations]
symbol:NEUROD6 "Neurogenic differentiation factor 6"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0021542 GeneTree:ENSGT00680000099860 InterPro:IPR022575
Pfam:PF12533 HOGENOM:HOG000049256 HOVERGEN:HBG000250
InterPro:IPR016637 PIRSF:PIRSF015618 eggNOG:NOG242996
OrthoDB:EOG408N8N EMBL:BC123740 IPI:IPI00703614
RefSeq:NP_001069689.1 UniGene:Bt.11684 ProteinModelPortal:Q08DI0
Ensembl:ENSBTAT00000000728 GeneID:540464 KEGG:bta:540464 CTD:63974
InParanoid:Q08DI0 KO:K09080 OMA:LPTESHF NextBio:20878654
Uniprot:Q08DI0
Length = 337
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R NARER RMH LNDALD LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 96 RQEANARERNRMHGLNDALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRIG 153
Query: 146 RR--IITYIQ 153
+R ++T++Q
Sbjct: 154 KRPDLLTFVQ 163
>UNIPROTKB|E2R3T3 [details] [associations]
symbol:NEUROD6 "Neurogenic differentiation factor"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0021542 "dentate gyrus development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0030154 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021542
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
InterPro:IPR016637 PIRSF:PIRSF015618 CTD:63974 KO:K09080
OMA:LPTESHF EMBL:AAEX03009413 RefSeq:XP_539504.1
ProteinModelPortal:E2R3T3 SMR:E2R3T3 PRIDE:E2R3T3
Ensembl:ENSCAFT00000005020 GeneID:482387 KEGG:cfa:482387
NextBio:20856998 Uniprot:E2R3T3
Length = 337
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R NARER RMH LNDALD LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 96 RQEANARERNRMHGLNDALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRIG 153
Query: 146 RR--IITYIQ 153
+R ++T++Q
Sbjct: 154 KRPDLLTFVQ 163
>UNIPROTKB|Q96NK8 [details] [associations]
symbol:NEUROD6 "Neurogenic differentiation factor 6"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 EMBL:CH471073 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021542 InterPro:IPR022575
Pfam:PF12533 HOVERGEN:HBG000250 InterPro:IPR016637
PIRSF:PIRSF015618 eggNOG:NOG242996 OrthoDB:EOG408N8N CTD:63974
KO:K09080 OMA:LPTESHF EMBL:AF063609 EMBL:AF248954 EMBL:AK055238
EMBL:AK289619 IPI:IPI00102358 RefSeq:NP_073565.2 UniGene:Hs.45152
ProteinModelPortal:Q96NK8 SMR:Q96NK8 STRING:Q96NK8
PhosphoSite:Q96NK8 DMDM:20139067 PRIDE:Q96NK8 DNASU:63974
Ensembl:ENST00000297142 GeneID:63974 KEGG:hsa:63974 UCSC:uc003tch.3
GeneCards:GC07M031343 HGNC:HGNC:13804 MIM:611513 neXtProt:NX_Q96NK8
PharmGKB:PA31568 InParanoid:Q96NK8 PhylomeDB:Q96NK8 ChiTaRS:NEUROD6
GenomeRNAi:63974 NextBio:65770 ArrayExpress:Q96NK8 Bgee:Q96NK8
CleanEx:HS_NEUROD6 Genevestigator:Q96NK8 GermOnline:ENSG00000164600
Uniprot:Q96NK8
Length = 337
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R NARER RMH LNDALD LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 96 RQEANARERNRMHGLNDALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRIG 153
Query: 146 RR--IITYIQ 153
+R ++T++Q
Sbjct: 154 KRPDLLTFVQ 163
>MGI|MGI:106593 [details] [associations]
symbol:Neurod6 "neurogenic differentiation 6" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0021542 "dentate gyrus development" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:106593
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021542
InterPro:IPR022575 Pfam:PF12533 HOGENOM:HOG000049256
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618
eggNOG:NOG242996 OrthoDB:EOG408N8N CTD:63974 KO:K09080 OMA:LPTESHF
EMBL:D44480 EMBL:U29086 IPI:IPI00115630 PIR:I48682 PIR:I57038
RefSeq:NP_033847.1 UniGene:Mm.5106 ProteinModelPortal:P48986
SMR:P48986 STRING:P48986 PhosphoSite:P48986 PRIDE:P48986
Ensembl:ENSMUST00000044767 GeneID:11922 KEGG:mmu:11922
InParanoid:P48986 NextBio:279993 Bgee:P48986 CleanEx:MM_NEUROD6
Genevestigator:P48986 GermOnline:ENSMUSG00000037984 Uniprot:P48986
Length = 337
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R NARER RMH LNDALD LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 96 RQEANARERNRMHGLNDALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRIG 153
Query: 146 RR--IITYIQ 153
+R ++T++Q
Sbjct: 154 KRPDLLTFVQ 163
>RGD|1562793 [details] [associations]
symbol:Neurod6 "neuronal differentiation 6" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:1562793 GO:GO:0005634
GO:GO:0030154 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021542
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
HOGENOM:HOG000049256 HOVERGEN:HBG000250 InterPro:IPR016637
PIRSF:PIRSF015618 eggNOG:NOG242996 OrthoDB:EOG408N8N CTD:63974
KO:K09080 OMA:LPTESHF EMBL:CH474011 EMBL:BC168855 IPI:IPI00214871
RefSeq:NP_001102707.1 UniGene:Rn.220502 UniGene:Rn.84947
STRING:B5DEY7 Ensembl:ENSRNOT00000016182 GeneID:500137
KEGG:rno:500137 UCSC:RGD:1562793 NextBio:705225
Genevestigator:B5DEY7 Uniprot:B5DEY7
Length = 337
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R NARER RMH LNDALD LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 96 RQEANARERNRMHGLNDALDNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRIG 153
Query: 146 RR--IITYIQ 153
+R ++T++Q
Sbjct: 154 KRPDLLTFVQ 163
>ZFIN|ZDB-GENE-010608-4 [details] [associations]
symbol:neurog3 "neurogenin 3" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-010608-4 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:50674
EMBL:AF181996 IPI:IPI00483939 RefSeq:NP_571890.1 UniGene:Dr.82512
ProteinModelPortal:Q9DG56 GeneID:114411 KEGG:dre:114411
HOVERGEN:HBG104678 InParanoid:Q9DG56 NextBio:20796902
ArrayExpress:Q9DG56 Uniprot:Q9DG56
Length = 208
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 37/95 (38%), Positives = 52/95 (54%)
Query: 70 GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLL 129
G L+ L +RQ R+ N R R RMH+LN ALD LR+V+P P KL+KI TL
Sbjct: 64 GKLKKLMSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLPTF--PDDAKLTKIETLR 121
Query: 130 LAKNYILMQANAL---EELRRIITYIQAQGTMTMP 161
A+NYI + L + +R+ + Q Q + +P
Sbjct: 122 FARNYIWALSETLRIADHVRQRSNHAQDQENLAVP 156
>ZFIN|ZDB-GENE-990415-172 [details] [associations]
symbol:neurod "neurogenic differentiation"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048923 "posterior lateral line neuromast hair
cell differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-990415-172
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048923
eggNOG:NOG287211 GeneTree:ENSGT00680000099860 InterPro:IPR022575
Pfam:PF12533 HOGENOM:HOG000049256 HOVERGEN:HBG000250 KO:K08033
OrthoDB:EOG44F69G InterPro:IPR016637 PIRSF:PIRSF015618
EMBL:AF017302 EMBL:AF036148 EMBL:BC056603 IPI:IPI00508460
RefSeq:NP_571053.1 UniGene:Dr.75801 ProteinModelPortal:O42202
STRING:O42202 Ensembl:ENSDART00000011837 GeneID:30169
KEGG:dre:30169 CTD:30169 InParanoid:O42202 OMA:DIPMENI
NextBio:20806637 Bgee:O42202 Uniprot:O42202
Length = 350
Score = 148 (57.2 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
K R+ NARER RMH LNDAL+ LR V+P +S + +KLSKI TL LAKNYI + L
Sbjct: 95 KMRRMKANARERNRMHGLNDALESLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEIL 152
Query: 143 EELRR--IITYIQA 154
+ +++++QA
Sbjct: 153 RSGKSPDLMSFVQA 166
>ZFIN|ZDB-GENE-010608-2 [details] [associations]
symbol:neurod6b "neurogenic differentiation 6b"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-010608-2
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
HOGENOM:HOG000049256 HOVERGEN:HBG000250 EMBL:AF115773 EMBL:BC076065
IPI:IPI00495839 IPI:IPI00829018 RefSeq:NP_571892.2 UniGene:Dr.81125
ProteinModelPortal:Q9W6C7 Ensembl:ENSDART00000018150 GeneID:114415
KEGG:dre:114415 CTD:114415 eggNOG:NOG242996 InParanoid:Q9W6C7
OMA:SPHFDGQ OrthoDB:EOG408N8N NextBio:20796905 ArrayExpress:Q9W6C7
Bgee:Q9W6C7 Uniprot:Q9W6C7
Length = 317
Score = 147 (56.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 74 PLAKKNR-QGKTVRLN---INARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLL 129
P KK+ +G V++ NARER RMH LNDAL+ LR V+P +S + +KLSKI TL
Sbjct: 64 PRKKKSEGRGDRVKMRRQEANARERSRMHGLNDALESLRKVVP-CYSKT-QKLSKIETLR 121
Query: 130 LAKNYILMQANALEELRR--IITYIQ 153
LAKNYI + L +R ++ ++Q
Sbjct: 122 LAKNYIWALSETLSAGKRPDLLAFVQ 147
>UNIPROTKB|F1NKX5 [details] [associations]
symbol:NEUROD1 "Neurogenic differentiation factor"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
GO:GO:0043066 GO:GO:0007399 GO:GO:0051091 GO:GO:0009749
GO:GO:0043565 GO:GO:0045597 GO:GO:0003700 GO:GO:0003682
GO:GO:0042593 GO:GO:0043065 GO:GO:0007263 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071156 GO:GO:0001105 GO:GO:0030073
GO:GO:0045165 GO:GO:0070888 GO:GO:0023019 GO:GO:0046426
GO:GO:2000679 GeneTree:ENSGT00680000099860 InterPro:IPR022575
Pfam:PF12533 InterPro:IPR016637 PIRSF:PIRSF015618 OMA:DEEHETD
GO:GO:0035883 GO:GO:0060730 EMBL:AADN02019980 IPI:IPI01017129
Ensembl:ENSGALT00000014484 Uniprot:F1NKX5
Length = 357
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 43/109 (39%), Positives = 56/109 (51%)
Query: 47 DENCPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDE 106
DE E Q P G A+ R K R+ NARER RMH LN ALD
Sbjct: 68 DEEEEEEEEEEDDEQKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDN 126
Query: 107 LRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
LR V+P +S + +KLSKI TL LAKNYI + L + +++++Q
Sbjct: 127 LRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 173
>UNIPROTKB|P79765 [details] [associations]
symbol:NEUROD1 "Neurogenic differentiation factor 1"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR022575 Pfam:PF12533
EMBL:Y09596 EMBL:AF060885 IPI:IPI00597548 RefSeq:NP_990251.1
UniGene:Gga.1840 ProteinModelPortal:P79765 STRING:P79765
GeneID:395754 KEGG:gga:395754 CTD:4760 eggNOG:NOG268401
HOGENOM:HOG000049256 HOVERGEN:HBG000250 InParanoid:P79765 KO:K08033
OrthoDB:EOG44F69G NextBio:20815822 InterPro:IPR016637
PIRSF:PIRSF015618 Uniprot:P79765
Length = 357
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 43/109 (39%), Positives = 56/109 (51%)
Query: 47 DENCPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDE 106
DE E Q P G A+ R K R+ NARER RMH LN ALD
Sbjct: 68 DEEEEEEEEEEDDEQKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDN 126
Query: 107 LRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
LR V+P +S + +KLSKI TL LAKNYI + L + +++++Q
Sbjct: 127 LRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 173
>ZFIN|ZDB-GENE-030730-1 [details] [associations]
symbol:neurod4 "neurogenic differentiation 4"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA;IGI] [GO:0001839 "neural plate
morphogenesis" evidence=IMP] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-030730-1 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0050769
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001839
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
InterPro:IPR016637 PIRSF:PIRSF015618 EMBL:CU041401 IPI:IPI00487566
Ensembl:ENSDART00000145072 ArrayExpress:F1QWM8 Bgee:F1QWM8
Uniprot:F1QWM8
Length = 348
Score = 147 (56.8 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 38/81 (46%), Positives = 48/81 (59%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G A++ R + R+ NARER RMH LNDALD LR V+P +S + +KL
Sbjct: 77 PKRRGPKKKKMTKARQERF-RARRIKANARERSRMHGLNDALDNLRRVMP-CYSKT-QKL 133
Query: 123 SKIATLLLAKNYILMQANALE 143
SKI TL LA+NYI + LE
Sbjct: 134 SKIETLRLARNYIWALSEVLE 154
>MGI|MGI:1339708 [details] [associations]
symbol:Neurod1 "neurogenic differentiation 1" species:10090
"Mus musculus" [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IGI]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IC;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=ISO] [GO:0007263
"nitric oxide mediated signal transduction" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0009749 "response
to glucose stimulus" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0021542 "dentate gyrus
development" evidence=IGI;IMP] [GO:0021549 "cerebellum development"
evidence=IMP] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IDA] [GO:0030073 "insulin
secretion" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0031018 "endocrine pancreas development" evidence=IMP]
[GO:0035881 "amacrine cell differentiation" evidence=IDA]
[GO:0035883 "enteroendocrine cell differentiation" evidence=IMP]
[GO:0042593 "glucose homeostasis" evidence=IMP] [GO:0043010
"camera-type eye development" evidence=IGI] [GO:0043065 "positive
regulation of apoptotic process" evidence=IDA] [GO:0043066
"negative regulation of apoptotic process" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045165 "cell fate commitment" evidence=IGI] [GO:0045597
"positive regulation of cell differentiation" evidence=IDA]
[GO:0045664 "regulation of neuron differentiation" evidence=IGI]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA;IMP] [GO:0046426 "negative regulation of
JAK-STAT cascade" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO;IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IMP] [GO:0048839 "inner ear development"
evidence=IMP] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0060730 "regulation of intestinal epithelial structure
maintenance" evidence=IDA] [GO:0070888 "E-box binding"
evidence=ISO;IDA] [GO:0071156 "regulation of cell cycle arrest"
evidence=IMP] [GO:0071333 "cellular response to glucose stimulus"
evidence=ISO] [GO:2000679 "positive regulation of transcription
regulatory region DNA binding" evidence=ISO] Reactome:REACT_13641
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:1339708 GO:GO:0005737 GO:GO:0043066 GO:GO:0005654
GO:GO:0051091 GO:GO:0042493 GO:GO:0009952 GO:GO:0009749
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0042593 GO:GO:0043065 GO:GO:0003690 GO:GO:0021549
GO:GO:0045666 GO:GO:0007263 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071156 GO:GO:0048839 GO:GO:0001105 GO:GO:0030073
GO:GO:0070888 GO:GO:0023019 GO:GO:0021542 GO:GO:0046426
GO:GO:0048562 GO:GO:2000679 eggNOG:NOG287211
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
CTD:4760 HOGENOM:HOG000049256 HOVERGEN:HBG000250 KO:K08033
OrthoDB:EOG44F69G InterPro:IPR016637 PIRSF:PIRSF015618 OMA:DEEHETD
GO:GO:0035881 GO:GO:0035883 GO:GO:0003326 GO:GO:0003329
GO:GO:0060730 EMBL:U28068 EMBL:U28888 EMBL:AK005073 EMBL:AK018781
EMBL:BC018241 IPI:IPI00121519 PIR:I49338 RefSeq:NP_035024.1
UniGene:Mm.4636 PDB:2QL2 PDBsum:2QL2 ProteinModelPortal:Q60867
SMR:Q60867 IntAct:Q60867 STRING:Q60867 PhosphoSite:Q60867
PRIDE:Q60867 Ensembl:ENSMUST00000041099 GeneID:18012 KEGG:mmu:18012
InParanoid:Q60867 EvolutionaryTrace:Q60867 NextBio:293037
Bgee:Q60867 CleanEx:MM_NEUROD1 Genevestigator:Q60867
GermOnline:ENSMUSG00000034701 Uniprot:Q60867
Length = 357
Score = 147 (56.8 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 43/111 (38%), Positives = 58/111 (52%)
Query: 47 DENCPEHLSHNSRFQD--PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDAL 104
DE+ E +D P G A+ R K R+ NARER RMH LN AL
Sbjct: 63 DEDLEEEEEEEEEEEDQKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAAL 121
Query: 105 DELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
D LR V+P +S + +KLSKI TL LAKNYI + L + +++++Q
Sbjct: 122 DNLRKVVP-CYSKT-QKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 170
>UNIPROTKB|E1C082 [details] [associations]
symbol:BHLHA15 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006851 "mitochondrial calcium ion
transport" evidence=IEA] [GO:0007030 "Golgi organization"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007267 "cell-cell signaling"
evidence=IEA] [GO:0019722 "calcium-mediated signaling"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048312 "intracellular
distribution of mitochondria" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
GO:GO:0019722 GO:GO:0045944 GO:GO:0006851 GO:GO:0007267
GO:GO:0007186 GO:GO:0042593 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0007030 CTD:168620 KO:K08040
GO:GO:0048312 EMBL:AADN02023906 IPI:IPI00571788 RefSeq:XP_425228.1
Ensembl:ENSGALT00000005510 GeneID:427655 KEGG:gga:427655
OMA:CLRHTER NextBio:20828867 Uniprot:E1C082
Length = 166
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 37/87 (42%), Positives = 49/87 (56%)
Query: 50 CPEHLSHNSR-FQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
C H S ++ + A + P + K+R + RL N RER+RMH LN+A LR
Sbjct: 33 CLRHTERRSGGSKESSRIAAARAKHPWSSKDRLLR--RLESNERERQRMHKLNNAFQALR 90
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
VIP+ + + KLSKI TL LAKNYI
Sbjct: 91 EVIPHVRAEN--KLSKIETLTLAKNYI 115
>UNIPROTKB|H9L3S1 [details] [associations]
symbol:NEUROD4 "Neurogenic differentiation factor"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0035881 "amacrine cell differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0048666 "neuron development" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
InterPro:IPR016637 PIRSF:PIRSF015618 OMA:YGHMETH EMBL:AADN02072390
Ensembl:ENSGALT00000041276 Uniprot:H9L3S1
Length = 330
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>UNIPROTKB|P79766 [details] [associations]
symbol:NEUROD4 "Neurogenic differentiation factor 4"
species:9031 "Gallus gallus" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0035881
"amacrine cell differentiation" evidence=ISS] [GO:0045597 "positive
regulation of cell differentiation" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0045597
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR022575
Pfam:PF12533 HOGENOM:HOG000049256 HOVERGEN:HBG000250
InterPro:IPR016637 PIRSF:PIRSF015618 GO:GO:0035881 EMBL:Y09597
IPI:IPI00579923 RefSeq:NP_990407.1 UniGene:Gga.570
ProteinModelPortal:P79766 STRING:P79766 GeneID:395959
KEGG:gga:395959 CTD:58158 eggNOG:NOG300608 InParanoid:P79766
KO:K09079 OrthoDB:EOG4WDDCB NextBio:20816024 Uniprot:P79766
Length = 330
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>UNIPROTKB|E1BMG6 [details] [associations]
symbol:NEUROD4 "Neurogenic differentiation factor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0045597
"positive regulation of cell differentiation" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0035881
"amacrine cell differentiation" evidence=IEA] [GO:0010001 "glial
cell differentiation" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0001764 GO:GO:0006355 GO:GO:0003677 GO:GO:0007219
GO:GO:0006351 GO:GO:0048666 GO:GO:0007405 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0045165 GO:GO:0010001
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
InterPro:IPR016637 PIRSF:PIRSF015618 GO:GO:0035881 CTD:58158
KO:K09079 OMA:YGHMETH EMBL:DAAA02013606 IPI:IPI00687643
RefSeq:XP_002687669.1 RefSeq:XP_597881.2 Ensembl:ENSBTAT00000007397
GeneID:519656 KEGG:bta:519656 NextBio:20872921 Uniprot:E1BMG6
Length = 330
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>MGI|MGI:108055 [details] [associations]
symbol:Neurod4 "neurogenic differentiation 4" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IGI]
[GO:0010001 "glial cell differentiation" evidence=IGI] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0035881 "amacrine cell
differentiation" evidence=IDA] [GO:0043010 "camera-type eye
development" evidence=IGI] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045597 "positive regulation of cell
differentiation" evidence=ISO;IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:108055 GO:GO:0005634
GO:GO:0001764 GO:GO:0006355 GO:GO:0003677 GO:GO:0045597
GO:GO:0007219 GO:GO:0006351 GO:GO:0048666 GO:GO:0007405
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045165 GO:GO:0010001
InterPro:IPR022575 Pfam:PF12533 HOGENOM:HOG000049256
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618
GO:GO:0035881 CTD:58158 eggNOG:NOG300608 KO:K09079
OrthoDB:EOG4WDDCB OMA:YGHMETH EMBL:D85845 EMBL:AF036257
EMBL:BC054391 IPI:IPI00114230 RefSeq:NP_031527.1 UniGene:Mm.10695
ProteinModelPortal:O09105 SMR:O09105 STRING:O09105
PhosphoSite:O09105 PRIDE:O09105 Ensembl:ENSMUST00000061571
GeneID:11923 KEGG:mmu:11923 InParanoid:O09105 NextBio:279997
Bgee:O09105 CleanEx:MM_NEUROD4 Genevestigator:O09105
GermOnline:ENSMUSG00000048015 Uniprot:O09105
Length = 330
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>RGD|1310434 [details] [associations]
symbol:Neurod4 "neuronal differentiation 4" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA;ISO] [GO:0007405 "neuroblast proliferation"
evidence=IEA;ISO] [GO:0010001 "glial cell differentiation"
evidence=IEA;ISO] [GO:0035881 "amacrine cell differentiation"
evidence=IEA;ISO] [GO:0043010 "camera-type eye development"
evidence=ISO] [GO:0045165 "cell fate commitment" evidence=IEA;ISO]
[GO:0045597 "positive regulation of cell differentiation"
evidence=ISO;IMP] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048666 "neuron development" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:1310434 GO:GO:0005634 GO:GO:0001764 GO:GO:0006355 GO:GO:0003677
GO:GO:0045597 GO:GO:0007219 GO:GO:0006351 GO:GO:0048666
GO:GO:0060041 GO:GO:0007405 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0045165 GO:GO:0010001 GeneTree:ENSGT00680000099860
InterPro:IPR022575 Pfam:PF12533 InterPro:IPR016637
PIRSF:PIRSF015618 GO:GO:0035881 OrthoDB:EOG4WDDCB OMA:YGHMETH
IPI:IPI00195955 Ensembl:ENSRNOT00000011167 UCSC:RGD:1310434
Uniprot:D4A7M5
Length = 330
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>UNIPROTKB|E2R1V7 [details] [associations]
symbol:NEUROD4 "Neurogenic differentiation factor"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0048666 "neuron development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0035881 "amacrine cell differentiation" evidence=IEA]
[GO:0010001 "glial cell differentiation" evidence=IEA] [GO:0007405
"neuroblast proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0001764 GO:GO:0006355
GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 GO:GO:0048666
GO:GO:0007405 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045165
GO:GO:0010001 GeneTree:ENSGT00680000099860 InterPro:IPR022575
Pfam:PF12533 InterPro:IPR016637 PIRSF:PIRSF015618 GO:GO:0035881
KO:K09079 OMA:YGHMETH EMBL:AAEX03014963 RefSeq:XP_003433599.1
Ensembl:ENSCAFT00000010253 GeneID:100687079 KEGG:cfa:100687079
Uniprot:E2R1V7
Length = 331
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>UNIPROTKB|Q9HD90 [details] [associations]
symbol:NEUROD4 "Neurogenic differentiation factor 4"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007405
"neuroblast proliferation" evidence=IEA] [GO:0010001 "glial cell
differentiation" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0048666 "neuron development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035881 "amacrine cell
differentiation" evidence=ISS] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0001764
GO:GO:0006355 GO:GO:0003677 GO:GO:0045597 GO:GO:0007219
EMBL:CH471054 GO:GO:0006351 GO:GO:0048666 GO:GO:0007405
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045165 GO:GO:0010001
InterPro:IPR022575 Pfam:PF12533 HOGENOM:HOG000049256
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618
GO:GO:0035881 CTD:58158 eggNOG:NOG300608 KO:K09079
OrthoDB:EOG4WDDCB EMBL:AF203901 EMBL:AK314136 EMBL:AC027287
IPI:IPI00009621 RefSeq:NP_067014.2 UniGene:Hs.591024
ProteinModelPortal:Q9HD90 SMR:Q9HD90 IntAct:Q9HD90 STRING:Q9HD90
PhosphoSite:Q9HD90 DMDM:296439241 PRIDE:Q9HD90 DNASU:58158
Ensembl:ENST00000242994 GeneID:58158 KEGG:hsa:58158 UCSC:uc001sgp.4
GeneCards:GC12P055413 H-InvDB:HIX0026506 HGNC:HGNC:13802
HPA:HPA026998 MIM:611635 neXtProt:NX_Q9HD90 PharmGKB:PA31566
InParanoid:Q9HD90 OMA:YGHMETH PhylomeDB:Q9HD90 GenomeRNAi:58158
NextBio:64869 ArrayExpress:Q9HD90 Bgee:Q9HD90 CleanEx:HS_NEUROD4
Genevestigator:Q9HD90 GermOnline:ENSG00000123307 Uniprot:Q9HD90
Length = 331
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>UNIPROTKB|F1SR46 [details] [associations]
symbol:NEUROD4 "Neurogenic differentiation factor"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0045597
"positive regulation of cell differentiation" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0035881
"amacrine cell differentiation" evidence=IEA] [GO:0010001 "glial
cell differentiation" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0001764 GO:GO:0006355 GO:GO:0003677 GO:GO:0007219
GO:GO:0006351 GO:GO:0048666 GO:GO:0007405 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0045165 GO:GO:0010001
GeneTree:ENSGT00680000099860 InterPro:IPR022575 Pfam:PF12533
InterPro:IPR016637 PIRSF:PIRSF015618 GO:GO:0035881 KO:K09079
OMA:YGHMETH EMBL:CU466358 RefSeq:XP_001928280.1
Ensembl:ENSSSCT00000000321 GeneID:100151884 KEGG:ssc:100151884
Uniprot:F1SR46
Length = 331
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ NARER RMH LNDALD LR V+P +S + +KLSKI TL LA+NYI + LE
Sbjct: 89 RVKANARERTRMHGLNDALDNLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSEVLE 144
>ZFIN|ZDB-GENE-990415-174 [details] [associations]
symbol:neurog1 "neurogenin 1" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IMP]
[GO:0021884 "forebrain neuron development" evidence=IMP;IDA]
[GO:0048884 "neuromast development" evidence=IMP] [GO:0021575
"hindbrain morphogenesis" evidence=IGI] [GO:0007399 "nervous system
development" evidence=IEA;IEP;IGI;IMP] [GO:0048935 "peripheral
nervous system neuron development" evidence=IMP] [GO:0048918
"posterior lateral line nerve development" evidence=IMP]
[GO:0048699 "generation of neurons" evidence=IMP] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0070888 "E-box binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031103 "axon regeneration" evidence=IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-990415-174
GO:GO:0005634 GO:GO:0051091 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0021884 GO:GO:0050768
GO:GO:0070888 GO:GO:0000989 GO:GO:0021575 GO:GO:0031103
GO:GO:0048935 EMBL:AF017301 EMBL:AF024535 EMBL:AF036149 EMBL:U94588
EMBL:BC056575 EMBL:BC066427 IPI:IPI00488921 RefSeq:NP_571116.1
UniGene:Dr.75780 ProteinModelPortal:O42606 STRING:O42606
Ensembl:ENSDART00000078563 GeneID:30239 KEGG:dre:30239 CTD:4762
eggNOG:NOG275082 HOGENOM:HOG000063655 HOVERGEN:HBG101129
InParanoid:O42606 KO:K09081 OMA:PAYCASS OrthoDB:EOG4THVVQ
NextBio:20806693 Bgee:O42606 GO:GO:0048884 GO:GO:0048918
Uniprot:O42606
Length = 208
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/82 (51%), Positives = 47/82 (57%)
Query: 75 LAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNY 134
+ KKNR RL N RER RMH+LNDALD LR+V+P P KL+KI TL A NY
Sbjct: 66 VVKKNR-----RLKANDRERNRMHNLNDALDALRSVLPAF--PDDTKLTKIETLRFAHNY 118
Query: 135 ILMQANALEELRRIITYIQAQG 156
I AL E RI Q QG
Sbjct: 119 IW----ALSETIRIAD--QKQG 134
>UNIPROTKB|Q60430 [details] [associations]
symbol:NEUROD1 "Neurogenic differentiation factor 1"
species:10036 "Mesocricetus auratus" [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0021542 "dentate gyrus development"
evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS]
[GO:0031018 "endocrine pancreas development" evidence=ISS]
[GO:0035881 "amacrine cell differentiation" evidence=ISS]
[GO:0035883 "enteroendocrine cell differentiation" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0045597 "positive regulation of cell
differentiation" evidence=ISS] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0048839 "inner ear
development" evidence=ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0060730 "regulation of intestinal epithelial
structure maintenance" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:0071156 "regulation of cell cycle arrest"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0051091
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0043065
GO:GO:0021549 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0031018 GO:GO:0071156 GO:GO:0048839 GO:GO:0070888
GO:GO:0021542 InterPro:IPR022575 Pfam:PF12533 HOVERGEN:HBG000250
InterPro:IPR016637 PIRSF:PIRSF015618 GO:GO:0035881 GO:GO:0035883
GO:GO:0060730 EMBL:U24679 PIR:A57059 ProteinModelPortal:Q60430
Uniprot:Q60430
Length = 355
Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/95 (42%), Positives = 53/95 (55%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
Q P G A+ R K R+ NARER RMH LN ALD LR V+P +S + +
Sbjct: 78 QKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKT-Q 134
Query: 121 KLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
KLSKI TL LAKNYI + L + +++++Q
Sbjct: 135 KLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 169
>UNIPROTKB|F1N2Z3 [details] [associations]
symbol:NEUROD1 "Neurogenic differentiation factor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:2000679 "positive regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:0071156 "regulation of cell cycle
arrest" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0060730 "regulation of intestinal epithelial structure
maintenance" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046426 "negative regulation of JAK-STAT cascade" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0035883 "enteroendocrine cell differentiation"
evidence=IEA] [GO:0035881 "amacrine cell differentiation"
evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0021542 "dentate gyrus development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009749 "response to glucose stimulus"
evidence=IEA] [GO:0007263 "nitric oxide mediated signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=IEA] [GO:0003326 "pancreatic A cell fate commitment"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0051091
GO:GO:0009952 GO:GO:0009749 GO:GO:0043565 GO:GO:0045597
GO:GO:0003700 GO:GO:0003682 GO:GO:0042593 GO:GO:0043065
GO:GO:0007263 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030902
GO:GO:0071156 GO:GO:0048839 GO:GO:0001105 GO:GO:0030073
GO:GO:0070888 GO:GO:0023019 GO:GO:0021542 GO:GO:0046426
GO:GO:0048562 GO:GO:2000679 GeneTree:ENSGT00680000099860
InterPro:IPR022575 Pfam:PF12533 InterPro:IPR016637
PIRSF:PIRSF015618 OMA:DEEHETD GO:GO:0035881 GO:GO:0035883
GO:GO:0003326 GO:GO:0003329 GO:GO:0060730 EMBL:DAAA02004073
IPI:IPI00698228 UniGene:Bt.35508 Ensembl:ENSBTAT00000002301
Uniprot:F1N2Z3
Length = 356
Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/95 (42%), Positives = 53/95 (55%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
Q P G A+ R K R+ NARER RMH LN ALD LR V+P +S + +
Sbjct: 79 QKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKT-Q 135
Query: 121 KLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
KLSKI TL LAKNYI + L + +++++Q
Sbjct: 136 KLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 170
>UNIPROTKB|Q13562 [details] [associations]
symbol:NEUROD1 "Neurogenic differentiation factor 1"
species:9606 "Homo sapiens" [GO:0003326 "pancreatic A cell fate
commitment" evidence=IEA] [GO:0003329 "pancreatic PP cell fate
commitment" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0046426 "negative
regulation of JAK-STAT cascade" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0035881 "amacrine cell differentiation"
evidence=ISS] [GO:0021542 "dentate gyrus development" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0035883
"enteroendocrine cell differentiation" evidence=ISS] [GO:0031018
"endocrine pancreas development" evidence=ISS;TAS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0045597 "positive regulation of cell differentiation"
evidence=ISS] [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048839 "inner ear
development" evidence=ISS] [GO:0060730 "regulation of intestinal
epithelial structure maintenance" evidence=ISS] [GO:0071156
"regulation of cell cycle arrest" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA;IPI] [GO:0070888 "E-box
binding" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0007263 "nitric oxide mediated signal
transduction" evidence=IDA] [GO:0030073 "insulin secretion"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0022008 "neurogenesis" evidence=TAS] [GO:0009749
"response to glucose stimulus" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0050796 "regulation of insulin secretion"
evidence=IC] [GO:0042593 "glucose homeostasis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0048562 "embryonic organ morphogenesis"
evidence=ISS] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IPI] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:2000679 "positive regulation of transcription regulatory region
DNA binding" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005737 Reactome:REACT_111045
GO:GO:0043066 GO:GO:0005654 GO:GO:0051091 GO:GO:0042493
GO:GO:0009952 GO:GO:0009749 GO:GO:0043565 GO:GO:0003700
GO:GO:0003682 GO:GO:0042593 Orphanet:552 GO:GO:0050796
GO:GO:0043065 EMBL:CH471058 GO:GO:0003690 GO:GO:0021549
GO:GO:0046982 GO:GO:0045666 MIM:125853 GO:GO:0007263
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0031018 GO:GO:0071156
GO:GO:0048839 GO:GO:0001105 GO:GO:0030073 GO:GO:0070888
GO:GO:0023019 GO:GO:0021542 GO:GO:0046426 MIM:606391 EMBL:AC013733
GO:GO:0048562 GO:GO:2000679 eggNOG:NOG287211 InterPro:IPR022575
Pfam:PF12533 CTD:4760 HOVERGEN:HBG000250 KO:K08033
OrthoDB:EOG44F69G InterPro:IPR016637 PIRSF:PIRSF015618 EMBL:U50822
EMBL:D82347 EMBL:AF045152 EMBL:AB018693 EMBL:AB009997 EMBL:AB016079
EMBL:BT019731 EMBL:AK313799 EMBL:AB593068 EMBL:AB593069
EMBL:AB593070 EMBL:AB593071 EMBL:BC009046 EMBL:U80578 EMBL:U36472
IPI:IPI00299039 RefSeq:NP_002491.2 UniGene:Hs.574626
UniGene:Hs.709709 UniGene:Hs.741598 ProteinModelPortal:Q13562
SMR:Q13562 IntAct:Q13562 STRING:Q13562 PhosphoSite:Q13562
DMDM:311033428 PRIDE:Q13562 DNASU:4760 Ensembl:ENST00000295108
GeneID:4760 KEGG:hsa:4760 UCSC:uc002uof.3 GeneCards:GC02M182505
HGNC:HGNC:7762 HPA:CAB022450 HPA:HPA003278 MIM:601724 MIM:606394
neXtProt:NX_Q13562 PharmGKB:PA31564 InParanoid:Q13562 OMA:DEEHETD
PhylomeDB:Q13562 GenomeRNAi:4760 NextBio:18336 Bgee:Q13562
CleanEx:HS_NEUROD1 Genevestigator:Q13562 GermOnline:ENSG00000162992
GO:GO:0035881 GO:GO:0035883 GO:GO:0003326 GO:GO:0003329
GO:GO:0060730 Uniprot:Q13562
Length = 356
Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/95 (42%), Positives = 53/95 (55%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
Q P G A+ R K R+ NARER RMH LN ALD LR V+P +S + +
Sbjct: 79 QKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKT-Q 135
Query: 121 KLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
KLSKI TL LAKNYI + L + +++++Q
Sbjct: 136 KLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 170
>UNIPROTKB|F1RYP1 [details] [associations]
symbol:NEUROD1 "Neurogenic differentiation factor"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:2000679 "positive regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:0071156 "regulation of cell cycle
arrest" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0060730 "regulation of intestinal epithelial structure
maintenance" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046426 "negative regulation of JAK-STAT cascade" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0035883 "enteroendocrine cell differentiation"
evidence=IEA] [GO:0035881 "amacrine cell differentiation"
evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0021542 "dentate gyrus development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009749 "response to glucose stimulus"
evidence=IEA] [GO:0007263 "nitric oxide mediated signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=IEA] [GO:0003326 "pancreatic A cell fate commitment"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0051091
GO:GO:0009952 GO:GO:0009749 GO:GO:0043565 GO:GO:0045597
GO:GO:0003700 GO:GO:0003682 GO:GO:0042593 GO:GO:0043065
GO:GO:0007263 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030902
GO:GO:0071156 GO:GO:0048839 GO:GO:0001105 GO:GO:0030073
GO:GO:0070888 GO:GO:0023019 GO:GO:0021542 GO:GO:0046426
GO:GO:0048562 GO:GO:2000679 GeneTree:ENSGT00680000099860
InterPro:IPR022575 Pfam:PF12533 CTD:4760 KO:K08033
InterPro:IPR016637 PIRSF:PIRSF015618 OMA:DEEHETD GO:GO:0035881
GO:GO:0035883 GO:GO:0003326 GO:GO:0003329 GO:GO:0060730
EMBL:CU570999 RefSeq:XP_003359626.1 UniGene:Ssc.15925
Ensembl:ENSSSCT00000017434 GeneID:397283 KEGG:ssc:397283
Uniprot:F1RYP1
Length = 356
Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/95 (42%), Positives = 53/95 (55%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
Q P G A+ R K R+ NARER RMH LN ALD LR V+P +S + +
Sbjct: 79 QKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKT-Q 135
Query: 121 KLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
KLSKI TL LAKNYI + L + +++++Q
Sbjct: 136 KLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 170
>RGD|3165 [details] [associations]
symbol:Neurod1 "neuronal differentiation 1" species:10116 "Rattus
norvegicus" [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=IEA;ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA;ISO] [GO:0003326
"pancreatic A cell fate commitment" evidence=IEA;ISO] [GO:0003329
"pancreatic PP cell fate commitment" evidence=IEA;ISO] [GO:0003677
"DNA binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=ISO;ISS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IDA] [GO:0007263 "nitric oxide
mediated signal transduction" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0009749 "response to
glucose stimulus" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0021542 "dentate gyrus
development" evidence=ISO;ISS] [GO:0021549 "cerebellum development"
evidence=IEP;ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA;ISO] [GO:0030073 "insulin
secretion" evidence=IEA;ISO] [GO:0030902 "hindbrain development"
evidence=ISO] [GO:0031018 "endocrine pancreas development"
evidence=ISO;ISS] [GO:0035881 "amacrine cell differentiation"
evidence=ISO;ISS] [GO:0035883 "enteroendocrine cell differentiation"
evidence=ISO;ISS] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042593 "glucose homeostasis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045597
"positive regulation of cell differentiation" evidence=ISO;ISS]
[GO:0045664 "regulation of neuron differentiation" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO;IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0046426 "negative regulation of JAK-STAT cascade"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA;ISO] [GO:0048839 "inner ear development"
evidence=ISO;ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0060730 "regulation of intestinal epithelial
structure maintenance" evidence=ISO;ISS] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071156 "regulation of cell cycle arrest"
evidence=ISO;ISS] [GO:0071333 "cellular response to glucose stimulus"
evidence=IDA] [GO:2000679 "positive regulation of transcription
regulatory region DNA binding" evidence=IEA;ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:3165 GO:GO:0005634
GO:GO:0005737 GO:GO:0043066 GO:GO:0051091 GO:GO:0071333 GO:GO:0042493
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0006913 GO:GO:0003700
GO:GO:0003682 GO:GO:0043065 GO:GO:0003690 GO:GO:0021549 GO:GO:0045666
GO:GO:0007263 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0031018
GO:GO:0071156 GO:GO:0048839 GO:GO:0001105 GO:GO:0030073 GO:GO:0070888
GO:GO:0023019 GO:GO:0021542 GO:GO:0046426 GO:GO:0048562 GO:GO:2000679
eggNOG:NOG287211 GeneTree:ENSGT00680000099860 InterPro:IPR022575
Pfam:PF12533 CTD:4760 HOGENOM:HOG000049256 HOVERGEN:HBG000250
KO:K08033 OrthoDB:EOG44F69G InterPro:IPR016637 PIRSF:PIRSF015618
OMA:DEEHETD GO:GO:0035881 GO:GO:0035883 GO:GO:0003326 GO:GO:0003329
GO:GO:0060730 EMBL:D82075 EMBL:D82074 EMBL:D82945 EMBL:AF107728
EMBL:BC092367 EMBL:BC094526 EMBL:U80603 IPI:IPI00211014 PIR:JC4703
RefSeq:NP_062091.1 UniGene:Rn.44289 ProteinModelPortal:Q64289
STRING:Q64289 PhosphoSite:Q64289 Ensembl:ENSRNOT00000007662
GeneID:29458 KEGG:rno:29458 UCSC:RGD:3165 InParanoid:Q64289
NextBio:609242 ArrayExpress:Q64289 Genevestigator:Q64289
GermOnline:ENSRNOG00000005609 Uniprot:Q64289
Length = 357
Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/95 (42%), Positives = 53/95 (55%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
Q P G A+ R K R+ NARER RMH LN ALD LR V+P +S + +
Sbjct: 79 QKPKRRGPKKKKMTKARLERF-KLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKT-Q 135
Query: 121 KLSKIATLLLAKNYILMQANALEELRR--IITYIQ 153
KLSKI TL LAKNYI + L + +++++Q
Sbjct: 136 KLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQ 170
>UNIPROTKB|P79920 [details] [associations]
symbol:neurod4 "Neurogenic differentiation factor 4"
species:8355 "Xenopus laevis" [GO:0035881 "amacrine cell
differentiation" evidence=ISS] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0045597 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR022575 Pfam:PF12533
HOVERGEN:HBG000250 InterPro:IPR016637 PIRSF:PIRSF015618
GO:GO:0035881 CTD:58158 KO:K09079 EMBL:D85188 RefSeq:NP_001081213.1
UniGene:Xl.1263 ProteinModelPortal:P79920 GeneID:397714
KEGG:xla:397714 Xenbase:XB-GENE-972708 Uniprot:P79920
Length = 315
Score = 143 (55.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
R+ NARER RMH LNDAL+ LR V+P +S + +KLSKI TL LA+NYI ++ LE+
Sbjct: 80 RVKANARERSRMHGLNDALENLRRVMP-CYSKT-QKLSKIETLRLARNYIWALSDILEQ 136
>ZFIN|ZDB-GENE-990415-17 [details] [associations]
symbol:atoh1a "atonal homolog 1a" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048919 "posterior lateral line neuromast
development" evidence=IMP] [GO:0048839 "inner ear development"
evidence=IMP] [GO:0042668 "auditory receptor cell fate
determination" evidence=IMP] [GO:0042491 "auditory receptor cell
differentiation" evidence=IGI;IMP] [GO:0048884 "neuromast
development" evidence=IMP] [GO:0048923 "posterior lateral line
neuromast hair cell differentiation" evidence=IMP] [GO:0035675
"neuromast hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-990415-17
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG050609 GO:GO:0042668
GO:GO:0048923 EMBL:BC117598 IPI:IPI00495284 UniGene:Dr.566
ProteinModelPortal:Q1ED07 InParanoid:Q1ED07 ArrayExpress:Q1ED07
GO:GO:0035675 Uniprot:Q1ED07
Length = 292
Score = 142 (55.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/94 (45%), Positives = 52/94 (55%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K N K R+ NARERRRMH LN A DELR+VIP + +KLSK TL +A+
Sbjct: 107 PSSKSTNVVQKQRRMAANARERRRMHGLNHAFDELRSVIPAFDND--KKLSKYETLQMAQ 164
Query: 133 NYILMQANALEELRRIITYIQAQGTMTMPPGFDL 166
YI NAL +L +Q G PP DL
Sbjct: 165 IYI----NALSDL------LQGPGAKADPPNCDL 188
>UNIPROTKB|G5E6I7 [details] [associations]
symbol:LOC100848337 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048469 "cell maturation" evidence=IEA]
[GO:0048312 "intracellular distribution of mitochondria"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0019722 "calcium-mediated signaling"
evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007030 "Golgi organization" evidence=IEA]
[GO:0006851 "mitochondrial calcium ion transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 GO:GO:0019722
GO:GO:0045944 GO:GO:0006851 GO:GO:0007267 GO:GO:0007186
GO:GO:0042593 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0007030 GO:GO:0048469 KO:K08040
OMA:HSFREGT GO:GO:0048312 EMBL:DAAA02058326 RefSeq:XP_003584110.1
RefSeq:XP_003587893.1 Ensembl:ENSBTAT00000062953 GeneID:100848337
KEGG:bta:100848337 Uniprot:G5E6I7
Length = 187
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 37/82 (45%), Positives = 45/82 (54%)
Query: 55 SHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVR-LNINARERRRMHDLNDALDELRAVIPY 113
S +R Q G G +P R+ R L N RER+RMH LN+A LR VIP+
Sbjct: 44 SRTARAQGARAEG--GRRRPGPGGRRESSVQRRLESNERERQRMHKLNNAFQALREVIPH 101
Query: 114 AHSPSVRKLSKIATLLLAKNYI 135
+ +KLSKI TL LAKNYI
Sbjct: 102 VRAD--KKLSKIETLTLAKNYI 121
>UNIPROTKB|F1RFL0 [details] [associations]
symbol:BHLHA15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048469 "cell maturation" evidence=IEA] [GO:0048312
"intracellular distribution of mitochondria" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0019722 "calcium-mediated signaling"
evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007030 "Golgi organization" evidence=IEA]
[GO:0006851 "mitochondrial calcium ion transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 GO:GO:0019722
GO:GO:0045944 GO:GO:0006851 GO:GO:0007267 GO:GO:0007186
GO:GO:0042593 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0007030 GO:GO:0048469
OMA:HSFREGT GO:GO:0048312 EMBL:CU855506 Ensembl:ENSSSCT00000008340
Uniprot:F1RFL0
Length = 184
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 58 SRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSP 117
+R Q G P+ ++ + RL N RER+RMH LN+A LR VIP+ +
Sbjct: 46 ARVQTARAEGGRRRPGPVGRRESSVQR-RLESNERERQRMHKLNNAFQALREVIPHVRAD 104
Query: 118 SVRKLSKIATLLLAKNYI 135
+KLSKI TL LAKNYI
Sbjct: 105 --KKLSKIETLTLAKNYI 120
>UNIPROTKB|E2R952 [details] [associations]
symbol:BHLHA15 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0048469 "cell maturation"
evidence=IEA] [GO:0048312 "intracellular distribution of
mitochondria" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0019722
"calcium-mediated signaling" evidence=IEA] [GO:0007267 "cell-cell
signaling" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0007030 "Golgi organization"
evidence=IEA] [GO:0006851 "mitochondrial calcium ion transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
GO:GO:0019722 GO:GO:0045944 GO:GO:0006851 GO:GO:0007267
GO:GO:0007186 GO:GO:0042593 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0007030 GO:GO:0048469 CTD:168620
KO:K08040 OMA:HSFREGT GO:GO:0048312 EMBL:AAEX03004283
RefSeq:XP_546987.1 Ensembl:ENSCAFT00000024465 GeneID:489869
KEGG:cfa:489869 Uniprot:E2R952
Length = 187
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
RL N RER+RMH LN+A LR VIP+ + +KLSKI TL LAKNYI
Sbjct: 76 RLESNERERQRMHKLNNAFQALREVIPHVRAD--KKLSKIETLTLAKNYI 123
>UNIPROTKB|Q7RTS1 [details] [associations]
symbol:BHLHA15 "Class A basic helix-loop-helix protein 15"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006851 "mitochondrial calcium ion transport"
evidence=IEA] [GO:0007030 "Golgi organization" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
[GO:0019722 "calcium-mediated signaling" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048312 "intracellular distribution of
mitochondria" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 GO:GO:0019722 GO:GO:0045944
GO:GO:0006851 GO:GO:0007267 GO:GO:0007186 GO:GO:0006351
GO:GO:0042593 EMBL:CH236956 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0007030 GO:GO:0048469 EMBL:AC025605 EMBL:BC113394
EMBL:BC113396 EMBL:BK000276 IPI:IPI00219822 RefSeq:NP_803238.1
UniGene:Hs.674510 ProteinModelPortal:Q7RTS1 SMR:Q7RTS1
STRING:Q7RTS1 PhosphoSite:Q7RTS1 DMDM:50400944 PRIDE:Q7RTS1
Ensembl:ENST00000314018 GeneID:168620 KEGG:hsa:168620
UCSC:uc003upe.1 CTD:168620 GeneCards:GC07P097841 HGNC:HGNC:22265
MIM:608606 neXtProt:NX_Q7RTS1 PharmGKB:PA164716601 eggNOG:NOG299224
HOGENOM:HOG000095227 InParanoid:Q7RTS1 KO:K08040 OMA:HSFREGT
OrthoDB:EOG4V9TRX PhylomeDB:Q7RTS1 GenomeRNAi:168620 NextBio:88762
Bgee:Q7RTS1 Genevestigator:Q7RTS1 GO:GO:0048312 Uniprot:Q7RTS1
Length = 189
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
RL N RER+RMH LN+A LR VIP+ + +KLSKI TL LAKNYI
Sbjct: 77 RLESNERERQRMHKLNNAFQALREVIPHVRAD--KKLSKIETLTLAKNYI 124
>MGI|MGI:891976 [details] [associations]
symbol:Bhlha15 "basic helix-loop-helix family, member a15"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006851 "mitochondrial calcium ion transport"
evidence=IMP] [GO:0007030 "Golgi organization" evidence=IMP]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IDA] [GO:0007267 "cell-cell signaling" evidence=IMP]
[GO:0019722 "calcium-mediated signaling" evidence=IMP] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048312 "intracellular distribution of
mitochondria" evidence=IMP] [GO:0048469 "cell maturation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:891976 GO:GO:0005634 GO:GO:0003677
GO:GO:0019722 GO:GO:0045944 GO:GO:0006851 GO:GO:0007267
GO:GO:0007186 GO:GO:0006351 GO:GO:0042593 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 GO:GO:0007030
GO:GO:0048469 CTD:168620 eggNOG:NOG299224 HOGENOM:HOG000095227
KO:K08040 OMA:HSFREGT OrthoDB:EOG4V9TRX GO:GO:0048312 EMBL:AF091858
EMBL:AF049660 EMBL:AK020643 EMBL:BC011486 IPI:IPI00136004
RefSeq:NP_034930.1 UniGene:Mm.386767 ProteinModelPortal:Q9QYC3
SMR:Q9QYC3 PhosphoSite:Q9QYC3 PaxDb:Q9QYC3 PRIDE:Q9QYC3
Ensembl:ENSMUST00000060747 GeneID:17341 KEGG:mmu:17341
UCSC:uc009alh.1 InParanoid:Q9QYC3 NextBio:291912 Bgee:Q9QYC3
Genevestigator:Q9QYC3 GermOnline:ENSMUSG00000052271 Uniprot:Q9QYC3
Length = 197
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
RL N RER+RMH LN+A LR VIP+ + +KLSKI TL LAKNYI
Sbjct: 74 RLESNERERQRMHKLNNAFQALREVIPHVRAD--KKLSKIETLTLAKNYI 121
>RGD|3091 [details] [associations]
symbol:Bhlha15 "basic helix-loop-helix family, member a15"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006851
"mitochondrial calcium ion transport" evidence=IEA;ISO] [GO:0007030
"Golgi organization" evidence=IEA;ISO] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=IEA;ISO] [GO:0007267 "cell-cell
signaling" evidence=IEA;ISO] [GO:0019722 "calcium-mediated signaling"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0048312 "intracellular
distribution of mitochondria" evidence=IEA;ISO] [GO:0048469 "cell
maturation" evidence=IEA;ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:U58279 RGD:3091 GO:GO:0005634
GO:GO:0003677 GO:GO:0019722 GO:GO:0045944 GO:GO:0006851 GO:GO:0007267
GO:GO:0007186 GO:GO:0006351 GO:GO:0042593 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 GO:GO:0007030
GO:GO:0048469 CTD:168620 eggNOG:NOG299224 HOGENOM:HOG000095227
KO:K08040 OMA:HSFREGT OrthoDB:EOG4V9TRX GO:GO:0048312 EMBL:AF049874
EMBL:BC061868 IPI:IPI00189717 RefSeq:NP_036995.1 UniGene:Rn.9897
ProteinModelPortal:P70562 STRING:P70562 PRIDE:P70562
Ensembl:ENSRNOT00000037251 GeneID:25334 KEGG:rno:25334
InParanoid:P70562 NextBio:606223 Genevestigator:P70562
GermOnline:ENSRNOG00000025164 Uniprot:P70562
Length = 197
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
RL N RER+RMH LN+A LR VIP+ + +KLSKI TL LAKNYI
Sbjct: 74 RLESNERERQRMHKLNNAFQALREVIPHVRAD--KKLSKIETLTLAKNYI 121
>ZFIN|ZDB-GENE-070803-3 [details] [associations]
symbol:bhlha15 "basic helix-loop-helix family, member
a15" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0031017 "exocrine pancreas development"
evidence=IMP;IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-070803-3 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 GO:GO:0031017
EMBL:CABZ01021848 IPI:IPI00631445 Ensembl:ENSDART00000112119
OMA:SWRGSLR Bgee:F1RDU6 Uniprot:F1RDU6
Length = 184
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 32/58 (55%), Positives = 38/58 (65%)
Query: 79 NRQGKTVR-LNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
N + + VR L N RER+RMH LN+A LR IP H + +KLSKI TL LAKNYI
Sbjct: 70 NTKERNVRRLESNERERQRMHKLNNAFQALREAIP--HVKTEKKLSKIETLTLAKNYI 125
>FB|FBgn0015550 [details] [associations]
symbol:tap "target of Poxn" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0007423 "sensory organ
development" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 EMBL:AE014296 GO:GO:0006355 GO:GO:0007423
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 eggNOG:NOG275082 CTD:39935
EMBL:AF022883 EMBL:X95845 EMBL:AY119146 RefSeq:NP_524124.1
UniGene:Dm.5399 ProteinModelPortal:O16867 SMR:O16867 DIP:DIP-21817N
IntAct:O16867 MINT:MINT-899468 STRING:O16867
EnsemblMetazoa:FBtr0075216 GeneID:39935 KEGG:dme:Dmel_CG7659
FlyBase:FBgn0015550 InParanoid:O16867 OMA:NYIFALE OrthoDB:EOG4NS1SZ
PhylomeDB:O16867 GenomeRNAi:39935 NextBio:816159 Bgee:O16867
GermOnline:CG7659 Uniprot:O16867
Length = 398
Score = 123 (48.4 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
R+ N RER RMH+LNDAL++LR +P P KL+KI L A NYI LE
Sbjct: 156 RMKANDRERNRMHNLNDALEKLRVTLPSL--PEETKLTKIEILRFAHNYIFALEQVLE 211
Score = 37 (18.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 161 PPGFDLQATM 170
PPGFD +M
Sbjct: 294 PPGFDFTGSM 303
>FB|FBgn0053557 [details] [associations]
symbol:CG33557 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AE014298 GO:GO:0003700 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00690000101643 eggNOG:NOG246787
RefSeq:NP_001014730.1 UniGene:Dm.27541 ProteinModelPortal:Q59E67
SMR:Q59E67 EnsemblMetazoa:FBtr0091534 GeneID:3346145
KEGG:dme:Dmel_CG33557 UCSC:CG33557-RA FlyBase:FBgn0053557
InParanoid:Q59E67 OMA:YITHLRS OrthoDB:EOG4P8D1H PhylomeDB:Q59E67
GenomeRNAi:3346145 NextBio:849113 Bgee:Q59E67 Uniprot:Q59E67
Length = 150
Score = 109 (43.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 79 NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQ 138
N + + R INARER R ++N A + LR +IP P RKLSKI + LA +YI
Sbjct: 56 NHRRRPPRQKINARERYRTFNVNSAYEALRNLIPT--EPMNRKLSKIEIIRLASSYITHL 113
Query: 139 ANALE 143
++ LE
Sbjct: 114 SSTLE 118
Score = 34 (17.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 3 SNSGSYYSNETSQVPGRRTPLGNVGLG 29
S SG+ +E SQ+ P G G
Sbjct: 29 SGSGAAADSEDSQIGQEANPGGQENQG 55
>MGI|MGI:109619 [details] [associations]
symbol:Neurog2 "neurogenin 2" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IGI;IMP] [GO:0022008 "neurogenesis"
evidence=IDA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045165 "cell
fate commitment" evidence=IGI] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP;IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0070888 "E-box binding" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:109619
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0051091
GO:GO:0043565 GO:GO:0045944 GO:GO:0030900 GO:GO:0006351
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045165
GO:GO:0070888 GO:GO:0021954 HOGENOM:HOG000063655 HOVERGEN:HBG101129
CTD:63973 eggNOG:NOG238746 KO:K09082 OrthoDB:EOG4JM7R1 EMBL:U76207
EMBL:Y07621 EMBL:AF303001 IPI:IPI00308088 RefSeq:NP_033848.1
UniGene:Mm.42017 ProteinModelPortal:P70447 SMR:P70447 STRING:P70447
PhosphoSite:P70447 PRIDE:P70447 GeneID:11924 KEGG:mmu:11924
InParanoid:P70447 NextBio:280001 CleanEx:MM_NEUROG2
Genevestigator:P70447 GermOnline:ENSMUSG00000027967 Uniprot:P70447
Length = 263
Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/104 (41%), Positives = 53/104 (50%)
Query: 54 LSHNSRFQDPTHSGAMGSLQPLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIP 112
L H + + P+ S A+ A+ R KT RL N RER RMH+LN ALD LR V+P
Sbjct: 82 LMHECK-RRPSRSRAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLP 140
Query: 113 YAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQG 156
P KL+KI TL A NYI AL E R+ + G
Sbjct: 141 TF--PEDAKLTKIETLRFAHNYIW----ALTETLRLADHCAGAG 178
>ZFIN|ZDB-GENE-041201-1 [details] [associations]
symbol:atoh1b "atonal homolog 1b" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0042668 "auditory receptor cell fate determination"
evidence=IGI;IMP] [GO:0042491 "auditory receptor cell
differentiation" evidence=IGI] [GO:0048840 "otolith development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-041201-1 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG267878 GeneTree:ENSGT00680000099574
GO:GO:0048840 OrthoDB:EOG4PNXJ0 GO:GO:0042668 EMBL:CABZ01072950
EMBL:BC162684 EMBL:BC162697 IPI:IPI00490995 RefSeq:NP_001122151.1
UniGene:Dr.86663 STRING:B3DH94 Ensembl:ENSDART00000045677
GeneID:493915 KEGG:dre:493915 CTD:493915 HOVERGEN:HBG101286
NextBio:20865505 Uniprot:B3DH94
Length = 206
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 47 DENCPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQG--KTVRLNINARERRRMHDLNDAL 104
D +++S + H+G+ +P +K + G + R+ NARERRRMH LN A
Sbjct: 56 DSPMEKYISSPQAASEDHHAGSKA--RPGSKASVSGPQRHRRVAANARERRRMHGLNRAF 113
Query: 105 DELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
D+LR+VIP + +KLSK TL +A+ YI + LE
Sbjct: 114 DKLRSVIPSLENE--KKLSKYDTLQMAQIYITELSELLE 150
>RGD|1309061 [details] [associations]
symbol:Neurog2 "neurogenin 2" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0021954 "central nervous system neuron
development" evidence=IEA;ISO] [GO:0022008 "neurogenesis"
evidence=ISO] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045165 "cell
fate commitment" evidence=IEA;ISO] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0070888 "E-box binding" evidence=ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:1309061
GO:GO:0007411 GO:GO:0001764 GO:GO:0043565 GO:GO:0045944
GO:GO:0030900 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0045165 GO:GO:0021954
EMBL:CH473952 CTD:63973 KO:K09082 OMA:HECKRRP OrthoDB:EOG4JM7R1
IPI:IPI00211516 RefSeq:XP_001076231.2 RefSeq:XP_227716.5
Ensembl:ENSRNOT00000014570 GeneID:295475 KEGG:rno:295475
UCSC:RGD:1309061 NextBio:639646 Uniprot:D4A2E3
Length = 263
Score = 132 (51.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/76 (47%), Positives = 43/76 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
KT RL N RER RMH+LN ALD LR V+P P KL+KI TL A NYI AL
Sbjct: 111 KTRRLKANNRERNRMHNLNAALDALREVLPTF--PEDAKLTKIETLRFAHNYIW----AL 164
Query: 143 EELRRIITYIQAQGTM 158
E R+ + G++
Sbjct: 165 TETLRLADHCAGGGSL 180
>UNIPROTKB|F1P471 [details] [associations]
symbol:NEUROG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000989 "transcription factor binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0031536 "positive regulation of exit from
mitosis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA] [GO:0045165
"cell fate commitment" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0051091 GO:GO:0043204 GO:GO:0045944 GO:GO:0003682
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0045165 GO:GO:0070888 GO:GO:0000989 GO:GO:0031536 OMA:PAYCASS
EMBL:AADN02028405 IPI:IPI00586819 Ensembl:ENSGALT00000010264
Uniprot:F1P471
Length = 178
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 37/79 (46%), Positives = 44/79 (55%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R+ N RER RMH LN ALDELR+V+P P KL+KI TL A NYI AL E
Sbjct: 44 RVKANDRERNRMHHLNAALDELRSVLPTF--PDDTKLTKIETLRFAYNYIW----ALSET 97
Query: 146 RRIITYIQAQGTMTMPPGF 164
R+ A+ + PP F
Sbjct: 98 LRL-----AEQCLPPPPAF 111
>MGI|MGI:104654 [details] [associations]
symbol:Atoh1 "atonal homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0031490
"chromatin DNA binding" evidence=IDA] [GO:0042472 "inner ear
morphogenesis" evidence=IMP] [GO:0042491 "auditory receptor cell
differentiation" evidence=IDA;IMP] [GO:0042667 "auditory receptor
cell fate specification" evidence=IMP] [GO:0042668 "auditory
receptor cell fate determination" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045609 "positive
regulation of auditory receptor cell differentiation" evidence=IDA]
[GO:0045664 "regulation of neuron differentiation" evidence=IDA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048839 "inner
ear development" evidence=IMP] [GO:2000982 "positive regulation of
inner ear receptor cell differentiation" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:104654 GO:GO:0005634 GO:GO:0006915 GO:GO:0007411
GO:GO:0021987 GO:GO:0001764 GO:GO:0043565 GO:GO:0045944
GO:GO:0006351 GO:GO:0042472 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG267878 GeneTree:ENSGT00680000099574 GO:GO:0031490 CTD:474
HOGENOM:HOG000261611 HOVERGEN:HBG050609 KO:K09083 OMA:HSHYSDS
OrthoDB:EOG4PNXJ0 GO:GO:0042668 GO:GO:0042667 GO:GO:0045609
EMBL:D43694 EMBL:BC010820 EMBL:BC051256 IPI:IPI00115629 PIR:A56387
RefSeq:NP_031526.1 UniGene:Mm.57229 ProteinModelPortal:P48985
SMR:P48985 DIP:DIP-46434N STRING:P48985 PhosphoSite:P48985
PRIDE:P48985 Ensembl:ENSMUST00000101351 GeneID:11921 KEGG:mmu:11921
UCSC:uc009ceb.2 InParanoid:P48985 NextBio:279989 Bgee:P48985
CleanEx:MM_ATOH1 Genevestigator:P48985
GermOnline:ENSMUSG00000073043 Uniprot:P48985
Length = 351
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 145 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 202
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 203 IYI----NALSEL 211
>RGD|1565171 [details] [associations]
symbol:Atoh1 "atonal homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0021987 "cerebral cortex development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031490 "chromatin DNA
binding" evidence=IEA;ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0042491 "auditory receptor cell
differentiation" evidence=ISO] [GO:0042667 "auditory receptor cell
fate specification" evidence=IEA;ISO] [GO:0042668 "auditory
receptor cell fate determination" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045609
"positive regulation of auditory receptor cell differentiation"
evidence=IEA;ISO] [GO:0045664 "regulation of neuron
differentiation" evidence=ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048839 "inner ear development" evidence=ISO]
[GO:2000982 "positive regulation of inner ear receptor cell
differentiation" evidence=ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:1565171 GO:GO:0005634
GO:GO:0006915 GO:GO:0007411 GO:GO:0021987 GO:GO:0001764
GO:GO:0043565 GO:GO:0045944 GO:GO:0042472 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 GO:GO:0031490 CTD:474
KO:K09083 OMA:HSHYSDS OrthoDB:EOG4PNXJ0 GO:GO:0042668 GO:GO:0042667
GO:GO:0045609 EMBL:CH474042 IPI:IPI00215040 RefSeq:NP_001102708.1
UniGene:Rn.218507 Ensembl:ENSRNOT00000008358 GeneID:500156
KEGG:rno:500156 UCSC:RGD:1565171 NextBio:705288 Uniprot:D3ZQL9
Length = 351
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 145 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 202
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 203 IYI----NALSEL 211
>UNIPROTKB|A4IFC1 [details] [associations]
symbol:ATOH1 "ATOH1 protein" species:9913 "Bos taurus"
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045609 "positive
regulation of auditory receptor cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042668 "auditory receptor cell fate determination"
evidence=IEA] [GO:0042667 "auditory receptor cell fate
specification" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006915
GO:GO:0007411 GO:GO:0021987 GO:GO:0001764 GO:GO:0043565
GO:GO:0045944 GO:GO:0042472 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG267878 GeneTree:ENSGT00680000099574 GO:GO:0031490 CTD:474
HOGENOM:HOG000261611 HOVERGEN:HBG050609 KO:K09083 OMA:HSHYSDS
OrthoDB:EOG4PNXJ0 GO:GO:0042668 GO:GO:0042667 GO:GO:0045609
EMBL:DAAA02016933 EMBL:BC134506 IPI:IPI00708023
RefSeq:NP_001091568.1 UniGene:Bt.29000 STRING:A4IFC1
Ensembl:ENSBTAT00000003762 GeneID:539158 KEGG:bta:539158
InParanoid:A4IFC1 NextBio:20877817 Uniprot:A4IFC1
Length = 352
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 146 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 203
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 204 IYI----NALSEL 212
>UNIPROTKB|F1RWW1 [details] [associations]
symbol:ATOH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045609 "positive
regulation of auditory receptor cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042668 "auditory receptor cell fate determination"
evidence=IEA] [GO:0042667 "auditory receptor cell fate
specification" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006915
GO:GO:0007411 GO:GO:0021987 GO:GO:0001764 GO:GO:0043565
GO:GO:0045944 GO:GO:0042472 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0031490 KO:K09083 OMA:HSHYSDS
GO:GO:0042668 GO:GO:0042667 GO:GO:0045609 EMBL:CU464003
RefSeq:XP_003129367.1 UniGene:Ssc.93842 Ensembl:ENSSSCT00000010069
GeneID:100515497 KEGG:ssc:100515497 Uniprot:F1RWW1
Length = 353
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 147 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 204
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 205 IYI----NALSEL 213
>UNIPROTKB|Q92858 [details] [associations]
symbol:ATOH1 "Protein atonal homolog 1" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0042667 "auditory receptor cell
fate specification" evidence=IEA] [GO:0042668 "auditory receptor
cell fate determination" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045609 "positive
regulation of auditory receptor cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006915 GO:GO:0007411 GO:GO:0021987
GO:GO:0001764 GO:GO:0043565 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0042472 GO:GO:0006366 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG267878 GO:GO:0031490
EMBL:U61148 EMBL:BC069145 EMBL:BC069594 EMBL:BC069604 EMBL:BC113623
EMBL:BC113625 IPI:IPI00023811 RefSeq:NP_005163.1 UniGene:Hs.532680
ProteinModelPortal:Q92858 SMR:Q92858 STRING:Q92858
PhosphoSite:Q92858 DMDM:3913115 PaxDb:Q92858 PRIDE:Q92858 DNASU:474
Ensembl:ENST00000306011 GeneID:474 KEGG:hsa:474 UCSC:uc003hta.1
CTD:474 GeneCards:GC04P094750 HGNC:HGNC:797 MIM:601461
neXtProt:NX_Q92858 PharmGKB:PA25095 HOGENOM:HOG000261611
HOVERGEN:HBG050609 InParanoid:Q92858 KO:K09083 OMA:HSHYSDS
OrthoDB:EOG4PNXJ0 PhylomeDB:Q92858 GenomeRNAi:474 NextBio:1963
ArrayExpress:Q92858 Bgee:Q92858 CleanEx:HS_ATOH1
Genevestigator:Q92858 GermOnline:ENSG00000172238 GO:GO:0042668
GO:GO:0042667 GO:GO:0045609 Uniprot:Q92858
Length = 354
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 148 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 205
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 206 IYI----NALSEL 214
>UNIPROTKB|E2RG90 [details] [associations]
symbol:ATOH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045609
"positive regulation of auditory receptor cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042668 "auditory receptor cell fate
determination" evidence=IEA] [GO:0042667 "auditory receptor cell
fate specification" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006915 GO:GO:0007411 GO:GO:0021987
GO:GO:0001764 GO:GO:0043565 GO:GO:0045944 GO:GO:0042472
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0031490 CTD:474 KO:K09083 OMA:HSHYSDS GO:GO:0042668
GO:GO:0042667 GO:GO:0045609 EMBL:AAEX03016767 RefSeq:XP_544986.2
Ensembl:ENSCAFT00000015937 GeneID:487864 KEGG:cfa:487864
NextBio:20861352 Uniprot:E2RG90
Length = 356
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 150 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 207
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 208 IYI----NALSEL 216
>UNIPROTKB|Q5IS79 [details] [associations]
symbol:ATOH1 "Protein atonal homolog 1" species:9598 "Pan
troglodytes" [GO:0005634 "nucleus" evidence=ISS] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG267878
CTD:474 HOGENOM:HOG000261611 HOVERGEN:HBG050609 KO:K09083
OrthoDB:EOG4PNXJ0 EMBL:AY665249 RefSeq:NP_001012434.1
UniGene:Ptr.6575 ProteinModelPortal:Q5IS79 STRING:Q5IS79
GeneID:461380 KEGG:ptr:461380 InParanoid:Q5IS79 NextBio:20840977
Uniprot:Q5IS79
Length = 356
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 74 PLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
P +K+ N K RL NARERRRMH LN A D+LR VIP ++ +KLSK TL +A+
Sbjct: 150 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQ 207
Query: 133 NYILMQANALEEL 145
YI NAL EL
Sbjct: 208 IYI----NALSEL 216
>UNIPROTKB|F1PHE1 [details] [associations]
symbol:NEUROG3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 CTD:50674 KO:K08028 OMA:KKANDRE
EMBL:AAEX03002787 RefSeq:XP_546140.1 Ensembl:ENSCAFT00000036379
GeneID:489022 KEGG:cfa:489022 Uniprot:F1PHE1
Length = 215
Score = 127 (49.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 31/64 (48%), Positives = 38/64 (59%)
Query: 79 NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQ 138
++Q ++ R N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 78 SKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTF--PDDAKLTKIETLRFAHNYIWAL 135
Query: 139 ANAL 142
AL
Sbjct: 136 TQAL 139
>UNIPROTKB|F1S3R2 [details] [associations]
symbol:TCF21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060435 "bronchiole development" evidence=ISS]
[GO:0007530 "sex determination" evidence=ISS] [GO:0048732 "gland
development" evidence=ISS] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=ISS] [GO:0060541 "respiratory system
development" evidence=ISS] [GO:0060426 "lung vasculature
development" evidence=ISS] [GO:0060425 "lung morphogenesis"
evidence=ISS] [GO:0048608 "reproductive structure development"
evidence=ISS] [GO:0048286 "lung alveolus development" evidence=ISS]
[GO:0032835 "glomerulus development" evidence=ISS] [GO:0030855
"epithelial cell differentiation" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0001944
"vasculature development" evidence=ISS] [GO:0001763 "morphogenesis
of a branching structure" evidence=ISS] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001657
"ureteric bud development" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060766
"negative regulation of androgen receptor signaling pathway"
evidence=ISS] [GO:0070888 "E-box binding" evidence=ISS] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISS] [GO:0072277 "metanephric
glomerular capillary formation" evidence=ISS] [GO:0072162
"metanephric mesenchymal cell differentiation" evidence=ISS]
[GO:0060539 "diaphragm development" evidence=ISS] [GO:0060021
"palate development" evidence=ISS] [GO:0048536 "spleen development"
evidence=ISS] [GO:0014707 "branchiomeric skeletal muscle
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0001078
GO:GO:0001077 GO:GO:0048286 GO:GO:0048536 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658 GO:GO:0060539
GO:GO:0070888 GO:GO:0030855 GO:GO:0060008 GO:GO:0007530
GO:GO:0060766 GO:GO:0060426 GO:GO:0048557 GO:GO:0060425
GO:GO:0048732 GO:GO:0060435 GO:GO:0014707
GeneTree:ENSGT00690000101840 GO:GO:0072162 GO:GO:0072277
OMA:ESSNCET EMBL:CU466545 Ensembl:ENSSSCT00000004613 Uniprot:F1S3R2
Length = 180
Score = 113 (44.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
Score = 34 (17.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1 MDSNSGSYYSNETSQVPGR-RTPLGNVGLGG 30
MDSN SNE+++ T G GG
Sbjct: 25 MDSNKEFVTSNESTEESSNCETGSPQKGRGG 55
>WB|WBGene00000561 [details] [associations]
symbol:cnd-1 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0007413 "axonal fasciculation" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0018991 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0007413 EMBL:FO080774 PIR:T15764 RefSeq:NP_498115.1
ProteinModelPortal:P46581 SMR:P46581 IntAct:P46581 STRING:P46581
EnsemblMetazoa:C34E10.7 GeneID:183212 KEGG:cel:CELE_C34E10.7
CTD:183212 WormBase:C34E10.7 eggNOG:NOG287211
GeneTree:ENSGT00680000099860 HOGENOM:HOG000022011 InParanoid:P46581
OMA:REYIPIT NextBio:920322 InterPro:IPR022575 Pfam:PF12533
Uniprot:P46581
Length = 192
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 30/53 (56%), Positives = 35/53 (66%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
K R+ N RER RMH LN+ALD LR IP + +KLSKI TL LA+NYI
Sbjct: 18 KVRRVKANGRERARMHGLNNALDMLREYIPI--TTQHQKLSKIETLRLARNYI 68
>UNIPROTKB|Q9H2A3 [details] [associations]
symbol:NEUROG2 "Neurogenin-2" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0070888 "E-box binding" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0051091
GO:GO:0043565 GO:GO:0045944 GO:GO:0030900 GO:GO:0006351
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045165
GO:GO:0070888 GO:GO:0021954 HOGENOM:HOG000063655 HOVERGEN:HBG101129
EMBL:BC036847 EMBL:AF303002 IPI:IPI00218802 RefSeq:NP_076924.1
UniGene:Hs.741709 ProteinModelPortal:Q9H2A3 SMR:Q9H2A3
STRING:Q9H2A3 PhosphoSite:Q9H2A3 DMDM:60392832 PRIDE:Q9H2A3
Ensembl:ENST00000313341 GeneID:63973 KEGG:hsa:63973 UCSC:uc003ias.3
CTD:63973 GeneCards:GC04M113434 HGNC:HGNC:13805 HPA:CAB012342
MIM:606624 neXtProt:NX_Q9H2A3 PharmGKB:PA31570 eggNOG:NOG238746
InParanoid:Q9H2A3 KO:K09082 OMA:HECKRRP OrthoDB:EOG4JM7R1
PhylomeDB:Q9H2A3 GenomeRNAi:63973 NextBio:65766 Bgee:Q9H2A3
CleanEx:HS_NEUROG2 Genevestigator:Q9H2A3 GermOnline:ENSG00000178403
Uniprot:Q9H2A3
Length = 272
Score = 130 (50.8 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 54 LSHNSRFQDPTHSGAMGSLQPLAKK-NRQGKTVRLNINARERRRMHDLNDALDELRAVIP 112
L H+ + + P+ + A+ A+ R KT RL N RER RMH+LN ALD LR V+P
Sbjct: 82 LVHDCK-RRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLP 140
Query: 113 YAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMPPGFDLQATML 171
P KL+KI TL A NYI AL E R+ + G +P +A +L
Sbjct: 141 TF--PEDAKLTKIETLRFAHNYIW----ALTETLRLADHCGGGGG-GLPGALFSEAVLL 192
>UNIPROTKB|E1BHS2 [details] [associations]
symbol:NEUROG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045165
"cell fate commitment" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0045944 GO:GO:0030900 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0045165 GO:GO:0021954 CTD:63973 KO:K09082 OMA:HECKRRP
EMBL:DAAA02016483 IPI:IPI00717035 RefSeq:NP_001137577.1
UniGene:Bt.106329 Ensembl:ENSBTAT00000020291 GeneID:615555
KEGG:bta:615555 NextBio:20899669 Uniprot:E1BHS2
Length = 270
Score = 128 (50.1 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 31/53 (58%), Positives = 34/53 (64%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
KT RL N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 111 KTRRLKANNRERNRMHNLNAALDALREVLPTF--PEDAKLTKIETLRFAHNYI 161
>UNIPROTKB|E2QXK5 [details] [associations]
symbol:NEUROG2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0021954
"central nervous system neuron development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007411 GO:GO:0001764 GO:GO:0043565 GO:GO:0045944
GO:GO:0030900 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0045165 GO:GO:0021954 CTD:63973
KO:K09082 OMA:HECKRRP EMBL:AAEX03016826 RefSeq:XP_003434090.1
Ensembl:ENSCAFT00000039286 GeneID:100683455 KEGG:cfa:100683455
Uniprot:E2QXK5
Length = 272
Score = 128 (50.1 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 31/53 (58%), Positives = 34/53 (64%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
KT RL N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 111 KTRRLKANNRERNRMHNLNAALDALREVLPTF--PEDAKLTKIETLRFAHNYI 161
>WB|WBGene00003595 [details] [associations]
symbol:ngn-1 species:6239 "Caenorhabditis elegans"
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
HSSP:P01106 eggNOG:NOG275082 EMBL:FO081818 RefSeq:NP_500236.1
ProteinModelPortal:Q95XG7 SMR:Q95XG7 IntAct:Q95XG7 STRING:Q95XG7
EnsemblMetazoa:Y69A2AR.29 GeneID:177045 KEGG:cel:CELE_Y69A2AR.29
UCSC:Y69A2AR.29 CTD:177045 WormBase:Y69A2AR.29 HOGENOM:HOG000020147
InParanoid:Q95XG7 OMA:TIERAKT NextBio:895098 Uniprot:Q95XG7
Length = 184
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 81 QGKTVRLN-INARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
+ KTVR + NARERRRM+ LNDAL+ LR ++P P K++KI TL A+ YI
Sbjct: 58 RAKTVRRDKANARERRRMNSLNDALEHLRGILPAL--PDEPKMTKIETLRKAQEYI 111
>UNIPROTKB|Q9Y4Z2 [details] [associations]
symbol:NEUROG3 "Neurogenin-3" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IEA] [GO:0030855 "epithelial cell differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0007422 "peripheral nervous system development"
evidence=TAS] [GO:0031018 "endocrine pancreas development"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045
GO:GO:0051091 EMBL:CH471083 GO:GO:0045944 GO:GO:0007422
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0003713
GO:GO:0003690 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0031018 GO:GO:0030855 EMBL:AL450311 HOGENOM:HOG000063655
OrthoDB:EOG4JM7R1 EMBL:AJ133776 EMBL:AF234829 EMBL:AK313952
EMBL:BC074938 EMBL:BC074939 EMBL:BC117488 EMBL:BC126468
IPI:IPI00025789 RefSeq:NP_066279.2 UniGene:Hs.532682
ProteinModelPortal:Q9Y4Z2 SMR:Q9Y4Z2 STRING:Q9Y4Z2
PhosphoSite:Q9Y4Z2 DMDM:229462908 PRIDE:Q9Y4Z2 DNASU:50674
Ensembl:ENST00000242462 GeneID:50674 KEGG:hsa:50674 UCSC:uc001jpp.3
CTD:50674 GeneCards:GC10M071331 H-InvDB:HIX0035408 HGNC:HGNC:13806
HPA:HPA039785 MIM:604882 MIM:610370 neXtProt:NX_Q9Y4Z2
Orphanet:83620 PharmGKB:PA31571 eggNOG:NOG327835 HOVERGEN:HBG031743
InParanoid:Q9Y4Z2 KO:K08028 OMA:KKANDRE PhylomeDB:Q9Y4Z2
GenomeRNAi:50674 NextBio:53214 ArrayExpress:Q9Y4Z2 Bgee:Q9Y4Z2
CleanEx:HS_NEUROG3 Genevestigator:Q9Y4Z2 GermOnline:ENSG00000122859
Uniprot:Q9Y4Z2
Length = 214
Score = 124 (48.7 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 79 NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
++Q ++ R N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 78 SKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTF--PDDAKLTKIETLRFAHNYI 132
>MGI|MGI:893591 [details] [associations]
symbol:Neurog3 "neurogenin 3" species:10090 "Mus musculus"
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030855 "epithelial cell differentiation" evidence=IMP]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] Reactome:REACT_13641 InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:893591
GO:GO:0005829 GO:GO:0005634 GO:GO:0051091 GO:GO:0045944
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 Reactome:REACT_127416
GO:GO:0003713 GO:GO:0003690 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0031018 GO:GO:0030855 HOGENOM:HOG000063655
OrthoDB:EOG4JM7R1 CTD:50674 eggNOG:NOG327835 HOVERGEN:HBG031743
KO:K08028 OMA:KKANDRE EMBL:Y09167 EMBL:U76208 IPI:IPI00111788
RefSeq:NP_033849.3 UniGene:Mm.57236 ProteinModelPortal:P70661
SMR:P70661 STRING:P70661 PhosphoSite:P70661 PRIDE:P70661
Ensembl:ENSMUST00000050103 GeneID:11925 KEGG:mmu:11925
InParanoid:P70661 NextBio:280005 Bgee:P70661 CleanEx:MM_NEUROG3
Genevestigator:P70661 GermOnline:ENSMUSG00000044312 Uniprot:P70661
Length = 214
Score = 124 (48.7 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 79 NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
++Q ++ R N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 78 SKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTF--PDDAKLTKIETLRFAHNYI 132
>RGD|631350 [details] [associations]
symbol:Neurog3 "neurogenin 3" species:10116 "Rattus norvegicus"
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030855 "epithelial cell differentiation"
evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=IEP]
[GO:0030902 "hindbrain development" evidence=IEP] [GO:0045597
"positive regulation of cell differentiation" evidence=IEP]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:631350 GO:GO:0005634
GO:GO:0005737 GO:GO:0051091 GO:GO:0030900 GO:GO:0001077
GO:GO:0003713 GO:GO:0003690 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0030902 GO:GO:0021510
GeneTree:ENSGT00680000099574 GO:GO:0030855 EMBL:CH474016
HOGENOM:HOG000063655 OrthoDB:EOG4JM7R1 CTD:50674 eggNOG:NOG327835
HOVERGEN:HBG031743 KO:K08028 OMA:KKANDRE EMBL:Y10619
IPI:IPI00195482 RefSeq:NP_067732.1 UniGene:Rn.42927 STRING:O08718
Ensembl:ENSRNOT00000000661 GeneID:60329 KEGG:rno:60329
UCSC:RGD:631350 InParanoid:O08718 NextBio:611961
Genevestigator:O08718 Uniprot:O08718
Length = 214
Score = 124 (48.7 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 79 NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
++Q ++ R N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 78 SKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTF--PDDAKLTKIETLRFAHNYI 132
>UNIPROTKB|F1MGY3 [details] [associations]
symbol:NEUROG3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051091 "positive regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 GO:GO:0051091 GO:GO:0045944 GO:GO:0003700
GO:GO:0003713 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0030855 CTD:50674 KO:K08028
OMA:KKANDRE EMBL:DAAA02061835 IPI:IPI00693323 RefSeq:XP_002698912.1
RefSeq:XP_591702.1 PRIDE:F1MGY3 Ensembl:ENSBTAT00000008432
GeneID:540130 KEGG:bta:540130 NextBio:20878432 Uniprot:F1MGY3
Length = 215
Score = 124 (48.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 79 NRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
++Q ++ R N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 78 SKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTF--PDDAKLTKIETLRFAHNYI 132
>FB|FBgn0003270 [details] [associations]
symbol:amos "absent MD neurons and olfactory sensilla"
species:7227 "Drosophila melanogaster" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0016360 "sensory organ precursor cell fate determination"
evidence=IMP;IDA;TAS] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IPI] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0007423 "sensory organ development"
evidence=IMP;TAS] [GO:0008052 "sensory organ boundary
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0007399
EMBL:AE014134 GO:GO:0006355 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF166113 EMBL:BT028832 EMBL:BT028865
RefSeq:NP_477446.1 UniGene:Dm.4695 ProteinModelPortal:Q9Y0A7
SMR:Q9Y0A7 DIP:DIP-18188N IntAct:Q9Y0A7 MINT:MINT-340393
STRING:Q9Y0A7 EnsemblMetazoa:FBtr0081081 GeneID:35110
KEGG:dme:Dmel_CG10393 CTD:35110 FlyBase:FBgn0003270
eggNOG:NOG267878 GeneTree:ENSGT00680000099574 InParanoid:Q9Y0A7
OMA:MAQAYIG OrthoDB:EOG40001V PhylomeDB:Q9Y0A7 GenomeRNAi:35110
NextBio:791914 Bgee:Q9Y0A7 GermOnline:CG10393 GO:GO:0016360
Uniprot:Q9Y0A7
Length = 198
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 30/54 (55%), Positives = 36/54 (66%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYI 135
K RL NARERRRM+ LNDA D+LR V+P H R+LSK TL +A+ YI
Sbjct: 137 KKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHD---RRLSKYETLQMAQAYI 187
>ZFIN|ZDB-GENE-090805-1 [details] [associations]
symbol:atoh1c "atonal homolog 1c" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-090805-1 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 EMBL:CR792429 IPI:IPI00631849
RefSeq:XP_003199618.1 UniGene:Dr.159048 Ensembl:ENSDART00000057866
GeneID:100498672 KEGG:dre:100498672 CTD:100498672 Bgee:F1Q7A7
Uniprot:F1Q7A7
Length = 204
Score = 122 (48.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 32/59 (54%), Positives = 37/59 (62%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
RL NARERRRM LN A D LR+VIP S RKLSK TL +A+ YI + LE+
Sbjct: 73 RLAANARERRRMLGLNVAFDRLRSVIPNVESD--RKLSKSETLQMAQIYISTLSELLED 129
>UNIPROTKB|O57598 [details] [associations]
symbol:ATOH7 "Protein atonal homolog 7" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0009649 "entrainment of circadian clock"
evidence=IEA] [GO:0003407 "neural retina development" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0048663
"neuron fate commitment" evidence=TAS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0009649 GO:GO:0007623
GO:GO:0006351 GO:GO:0003407 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 HOVERGEN:HBG096161 GO:GO:0048663
KO:K09083 EMBL:AJ001178 EMBL:AJ630209 IPI:IPI00597478
RefSeq:NP_989999.1 UniGene:Gga.199 ProteinModelPortal:O57598
Ensembl:ENSGALT00000006264 GeneID:395388 KEGG:gga:395388 CTD:220202
eggNOG:NOG320395 HOGENOM:HOG000034180 InParanoid:O57598 OMA:HYLPFAG
OrthoDB:EOG4N30QJ NextBio:20815472 Uniprot:O57598
Length = 151
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/65 (47%), Positives = 36/65 (55%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 41 RLAANARERRRMQGLNTAFDRLRKVVPQWGQD--KKLSKYETLQMALSYIMALTRILAEA 98
Query: 146 RRIIT 150
R T
Sbjct: 99 ERYST 103
>FB|FBgn0024249 [details] [associations]
symbol:cato "cousin of atonal" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007423 "sensory organ
development" evidence=IMP;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AE013599 GO:GO:0007423
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
EMBL:BT028836 RefSeq:NP_477344.1 UniGene:Dm.27757 SMR:Q0IGT4
IntAct:Q0IGT4 STRING:Q0IGT4 EnsemblMetazoa:FBtr0087183 GeneID:36813
KEGG:dme:Dmel_CG7760 CTD:36813 FlyBase:FBgn0024249
InParanoid:Q0IGT4 OMA:YLGSPNY GenomeRNAi:36813 NextBio:800519
Uniprot:Q0IGT4
Length = 189
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 71 SLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSV-RKLSKIATLL 129
+L P +K R R NARER+RM+ LN A + LR V+P +PS+ +KLSK TL
Sbjct: 95 NLSPTVQKRR-----RQAANARERKRMNGLNAAFERLREVVP---APSIDQKLSKFETLQ 146
Query: 130 LAKNYILMQANAL 142
+A++YIL + L
Sbjct: 147 MAQSYILALCDLL 159
>UNIPROTKB|Q92886 [details] [associations]
symbol:NEUROG1 "Neurogenin-1" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA] [GO:0031536
"positive regulation of exit from mitosis" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0043204
"perikaryon" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0000989 "transcription
factor binding transcription factor activity" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0070888 "E-box binding" evidence=ISS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0051091 EMBL:CH471062 GO:GO:0030182 GO:GO:0043204
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0042472 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0045165 GO:GO:0070888 GO:GO:0000989 GO:GO:0031536 CTD:4762
eggNOG:NOG275082 HOGENOM:HOG000063655 HOVERGEN:HBG101129 KO:K09081
OrthoDB:EOG4THVVQ EMBL:U63842 EMBL:BT019366 EMBL:BC008687
EMBL:BC028226 IPI:IPI00023867 RefSeq:NP_006152.2 UniGene:Hs.248149
ProteinModelPortal:Q92886 SMR:Q92886 STRING:Q92886
PhosphoSite:Q92886 DMDM:37538313 PeptideAtlas:Q92886 PRIDE:Q92886
DNASU:4762 Ensembl:ENST00000314744 GeneID:4762 KEGG:hsa:4762
UCSC:uc003lax.3 GeneCards:GC05M134897 HGNC:HGNC:7764 MIM:601726
neXtProt:NX_Q92886 PharmGKB:PA31569 InParanoid:Q92886 OMA:LLPPQCV
PhylomeDB:Q92886 GenomeRNAi:4762 NextBio:18344 ArrayExpress:Q92886
Bgee:Q92886 CleanEx:HS_NEUROG1 Genevestigator:Q92886
GermOnline:ENSG00000181965 Uniprot:Q92886
Length = 237
Score = 123 (48.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R+ N RER RMH+LN ALD LR+V+P P KL+KI TL A NYI A L
Sbjct: 94 RVKANDRERNRMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETL 148
>MGI|MGI:107754 [details] [associations]
symbol:Neurog1 "neurogenin 1" species:10090 "Mus musculus"
[GO:0000989 "transcription factor binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IMP] [GO:0031536 "positive regulation of
exit from mitosis" evidence=IMP] [GO:0042472 "inner ear
morphogenesis" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA] [GO:0045165
"cell fate commitment" evidence=IGI] [GO:0045664 "regulation of
neuron differentiation" evidence=IGI] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0070888 "E-box binding" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:107754
GO:GO:0005634 GO:GO:0051091 GO:GO:0030182 GO:GO:0043204
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0042472
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0045165 GO:GO:0070888
GO:GO:0000989 GO:GO:0031536 CTD:4762 eggNOG:NOG275082
HOGENOM:HOG000063655 HOVERGEN:HBG101129 KO:K09081 OrthoDB:EOG4THVVQ
OMA:LLPPQCV EMBL:U63841 EMBL:U67776 EMBL:Y09166 EMBL:BC062148
IPI:IPI00111785 RefSeq:NP_035026.1 UniGene:Mm.266665
ProteinModelPortal:P70660 SMR:P70660 STRING:P70660
PhosphoSite:P70660 PRIDE:P70660 Ensembl:ENSMUST00000058475
GeneID:18014 KEGG:mmu:18014 UCSC:uc007qsl.1 InParanoid:P70660
NextBio:293045 Bgee:P70660 CleanEx:MM_NEUROG1 Genevestigator:P70660
GermOnline:ENSMUSG00000048904 Uniprot:P70660
Length = 244
Score = 123 (48.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R+ N RER RMH+LN ALD LR+V+P P KL+KI TL A NYI A L
Sbjct: 95 RVKANDRERNRMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETL 149
>RGD|3167 [details] [associations]
symbol:Neurog1 "neurogenin 1" species:10116 "Rattus norvegicus"
[GO:0000989 "transcription factor binding transcription factor
activity" evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development" evidence=NAS]
[GO:0022008 "neurogenesis" evidence=ISO] [GO:0030182 "neuron
differentiation" evidence=IEA;ISO] [GO:0031536 "positive regulation
of exit from mitosis" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043204 "perikaryon" evidence=IEA;ISO] [GO:0045165
"cell fate commitment" evidence=IEA;ISO] [GO:0045664 "regulation of
neuron differentiation" evidence=ISO] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0070888 "E-box binding" evidence=ISO;ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3167 GO:GO:0005634 GO:GO:0051091 GO:GO:0030182 GO:GO:0043204
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0042472 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0045165 GO:GO:0070888 GO:GO:0000989 GO:GO:0031536 CTD:4762
eggNOG:NOG275082 HOGENOM:HOG000063655 HOVERGEN:HBG101129 KO:K09081
OrthoDB:EOG4THVVQ OMA:LLPPQCV EMBL:U67777 IPI:IPI00189788
RefSeq:NP_062080.1 UniGene:Rn.10606 ProteinModelPortal:P70595
STRING:P70595 PhosphoSite:P70595 Ensembl:ENSRNOT00000015916
GeneID:29410 KEGG:rno:29410 UCSC:RGD:3167 InParanoid:P70595
NextBio:609072 Genevestigator:P70595 GermOnline:ENSRNOG00000022405
Uniprot:P70595
Length = 244
Score = 123 (48.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R+ N RER RMH+LN ALD LR+V+P P KL+KI TL A NYI A L
Sbjct: 95 RVKANDRERNRMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETL 149
>UNIPROTKB|E2RCZ5 [details] [associations]
symbol:NEUROG1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070888 "E-box binding" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0031536 "positive
regulation of exit from mitosis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000989 "transcription factor binding
transcription factor activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0051091
GO:GO:0030182 GO:GO:0043204 GO:GO:0045944 GO:GO:0003682
GO:GO:0042472 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0045165 GO:GO:0070888
GO:GO:0000989 GO:GO:0031536 CTD:4762 KO:K09081 OMA:LLPPQCV
EMBL:AAEX03007796 RefSeq:XP_538637.2 Ensembl:ENSCAFT00000001650
GeneID:481516 KEGG:cfa:481516 Uniprot:E2RCZ5
Length = 246
Score = 123 (48.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R+ N RER RMH+LN ALD LR+V+P P KL+KI TL A NYI A L
Sbjct: 97 RVKANDRERNRMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETL 151
>UNIPROTKB|F1RHB5 [details] [associations]
symbol:LOC100511625 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 OMA:LLPPQCV EMBL:CU639478
Ensembl:ENSSSCT00000015633 Uniprot:F1RHB5
Length = 246
Score = 123 (48.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R+ N RER RMH+LN ALD LR+V+P P KL+KI TL A NYI A L
Sbjct: 97 RVKANDRERNRMHNLNAALDALRSVLP--SFPDDSKLTKIETLRFAYNYIWALAETL 151
>UNIPROTKB|F1MZC4 [details] [associations]
symbol:NEUROG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070888 "E-box binding" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0031536 "positive regulation of
exit from mitosis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000989 "transcription factor binding
transcription factor activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0051091
GO:GO:0030182 GO:GO:0043204 GO:GO:0045944 GO:GO:0003682
GO:GO:0042472 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0045165 GO:GO:0070888
GO:GO:0000989 GO:GO:0031536 CTD:4762 KO:K09081 OMA:LLPPQCV
EMBL:DAAA02020354 IPI:IPI00686169 RefSeq:XP_002689240.1
RefSeq:XP_585336.2 Ensembl:ENSBTAT00000004322 GeneID:508548
KEGG:bta:508548 NextBio:20868567 Uniprot:F1MZC4
Length = 247
Score = 123 (48.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R+ N RER RMH+LN ALD LR+V+P P KL+KI TL A NYI A L
Sbjct: 98 RVKANDRERNRMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETL 152
>UNIPROTKB|E1BI88 [details] [associations]
symbol:ATOH7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009649 "entrainment of circadian clock" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009649
GO:GO:0007623 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 KO:K09083 CTD:220202 OMA:HYLPFAG
EMBL:DAAA02061814 IPI:IPI00716320 RefSeq:XP_002698904.1
RefSeq:XP_590240.2 Ensembl:ENSBTAT00000023292 GeneID:539903
KEGG:bta:539903 NextBio:20878291 Uniprot:E1BI88
Length = 152
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 42 RLAANARERRRMQGLNTAFDRLRRVVPQWGQD--KKLSKYETLQMALSYIMALTRILAEA 99
Query: 146 RR 147
R
Sbjct: 100 ER 101
>UNIPROTKB|F1PXX7 [details] [associations]
symbol:ATOH7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 KO:K09083 CTD:220202 OMA:HYLPFAG
EMBL:AAEX03002773 RefSeq:XP_546132.2 Ensembl:ENSCAFT00000021497
GeneID:489014 KEGG:cfa:489014 Uniprot:F1PXX7
Length = 152
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 42 RLAANARERRRMQGLNTAFDRLRRVVPQWGQD--KKLSKYETLQMALSYIMALTRILAEA 99
Query: 146 RR 147
R
Sbjct: 100 ER 101
>UNIPROTKB|Q8N100 [details] [associations]
symbol:ATOH7 "Protein atonal homolog 7" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0009649 "entrainment of circadian clock"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K09083 CTD:220202
eggNOG:NOG320395 HOGENOM:HOG000034180 OMA:HYLPFAG OrthoDB:EOG4N30QJ
HSSP:P61244 EMBL:AF418922 EMBL:BC032621 EMBL:BK000277
IPI:IPI00166032 RefSeq:NP_660161.1 UniGene:Hs.175396
UniGene:Hs.737072 ProteinModelPortal:Q8N100 SMR:Q8N100
STRING:Q8N100 PhosphoSite:Q8N100 DMDM:74750873 PRIDE:Q8N100
DNASU:220202 Ensembl:ENST00000373673 GeneID:220202 KEGG:hsa:220202
UCSC:uc001jnq.3 GeneCards:GC10M069990 HGNC:HGNC:13907 HPA:HPA027008
MIM:221900 MIM:609875 neXtProt:NX_Q8N100 Orphanet:300337
Orphanet:289499 PharmGKB:PA38369 HOVERGEN:HBG094840
InParanoid:Q8N100 GenomeRNAi:220202 NextBio:91026
ArrayExpress:Q8N100 Bgee:Q8N100 CleanEx:HS_ATOH7
Genevestigator:Q8N100 Uniprot:Q8N100
Length = 152
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 42 RLAANARERRRMQGLNTAFDRLRRVVPQWGQD--KKLSKYETLQMALSYIMALTRILAEA 99
Query: 146 RR 147
R
Sbjct: 100 ER 101
>UNIPROTKB|I3LH93 [details] [associations]
symbol:ATOH7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009649 "entrainment of circadian clock" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009649
GO:GO:0007623 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 KO:K09083 OMA:HYLPFAG EMBL:FP476081
RefSeq:XP_003483532.1 Ensembl:ENSSSCT00000023617 GeneID:100624800
KEGG:ssc:100624800 Uniprot:I3LH93
Length = 155
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 45 RLAANARERRRMQGLNTAFDRLRRVVPQWGQD--KKLSKYETLQMALSYIMALTRILAEA 102
Query: 146 RR 147
R
Sbjct: 103 ER 104
>UNIPROTKB|O13125 [details] [associations]
symbol:atoh7-a "Protein atonal homolog 7-A" species:8355
"Xenopus laevis" [GO:0048663 "neuron fate commitment" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:U93170
RefSeq:NP_001079289.1 UniGene:Xl.176 ProteinModelPortal:O13125
GeneID:378576 KEGG:xla:378576 CTD:378576 Xenbase:XB-GENE-6252646
HOVERGEN:HBG096161 GO:GO:0048663 Uniprot:O13125
Length = 138
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 31/68 (45%), Positives = 39/68 (57%)
Query: 81 QGKTVR-LNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA 139
+G T R L NARERRRM LN A D LR V+P ++LSK TL +A +YI+ +
Sbjct: 29 EGSTKRRLAANARERRRMQGLNTAFDSLRKVVPQWGED--KQLSKYETLQMALSYIMALS 86
Query: 140 NALEELRR 147
L E R
Sbjct: 87 RILSEAER 94
>MGI|MGI:1355553 [details] [associations]
symbol:Atoh7 "atonal homolog 7 (Drosophila)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:1355553
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
KO:K09083 CTD:220202 eggNOG:NOG320395 HOGENOM:HOG000034180
OMA:HYLPFAG OrthoDB:EOG4N30QJ HOVERGEN:HBG094840 EMBL:AF071223
EMBL:AF418923 EMBL:BC092234 IPI:IPI00131093 RefSeq:NP_058560.1
UniGene:Mm.228661 ProteinModelPortal:Q9Z2E5 SMR:Q9Z2E5
STRING:Q9Z2E5 PhosphoSite:Q9Z2E5 PRIDE:Q9Z2E5
Ensembl:ENSMUST00000044059 GeneID:53404 KEGG:mmu:53404
UCSC:uc007fjv.1 InParanoid:Q9Z2E5 NextBio:310217 Bgee:Q9Z2E5
CleanEx:MM_ATOH7 Genevestigator:Q9Z2E5 Uniprot:Q9Z2E5
Length = 149
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 43 RLAANARERRRMQGLNTAFDRLRRVVPQWGQD--KKLSKYETLQMALSYIIALTRILAEA 100
Query: 146 RR 147
R
Sbjct: 101 ER 102
>UNIPROTKB|A8E5T6 [details] [associations]
symbol:tcf21 "Transcription factor 21" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:0001763 "morphogenesis of a branching structure" evidence=ISS]
[GO:0001822 "kidney development" evidence=ISS] [GO:0001944
"vasculature development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007530 "sex determination" evidence=ISS]
[GO:0014707 "branchiomeric skeletal muscle development"
evidence=ISS] [GO:0030855 "epithelial cell differentiation"
evidence=ISS] [GO:0032835 "glomerulus development" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0046983 "protein
dimerization activity" evidence=ISS] [GO:0048286 "lung alveolus
development" evidence=ISS] [GO:0048536 "spleen development"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=ISS] [GO:0048608 "reproductive structure development"
evidence=ISS] [GO:0048732 "gland development" evidence=ISS]
[GO:0060008 "Sertoli cell differentiation" evidence=ISS]
[GO:0060021 "palate development" evidence=ISS] [GO:0060425 "lung
morphogenesis" evidence=ISS] [GO:0060426 "lung vasculature
development" evidence=ISS] [GO:0060435 "bronchiole development"
evidence=ISS] [GO:0060539 "diaphragm development" evidence=ISS]
[GO:0060541 "respiratory system development" evidence=ISS]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISS] [GO:0070888 "E-box binding" evidence=ISS]
[GO:0072162 "metanephric mesenchymal cell differentiation"
evidence=ISS] [GO:0072277 "metanephric glomerular capillary
formation" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0001078
GO:GO:0046983 GO:GO:0001077 GO:GO:0048286 GO:GO:0048536
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658
GO:GO:0060539 GO:GO:0070888 GO:GO:0030855 GO:GO:0060008
GO:GO:0007530 GO:GO:0060766 GO:GO:0060426 GO:GO:0048557
GO:GO:0060425 GO:GO:0048732 GO:GO:0060435 HOGENOM:HOG000261670
GO:GO:0014707 GeneTree:ENSGT00690000101840 GO:GO:0072162
GO:GO:0072277 CTD:6943 eggNOG:NOG235686 OrthoDB:EOG4BZN40
EMBL:BC153711 RefSeq:NP_001103518.1 UniGene:Str.62294
ProteinModelPortal:A8E5T6 STRING:A8E5T6 Ensembl:ENSXETT00000000219
GeneID:100126209 KEGG:xtr:100126209 Xenbase:XB-GENE-484805
OMA:ACANDER Bgee:A8E5T6 Uniprot:A8E5T6
Length = 179
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL N++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLGNINQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>UNIPROTKB|Q6GNB7 [details] [associations]
symbol:tcf21 "Transcription factor 21" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISS] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001763
"morphogenesis of a branching structure" evidence=ISS] [GO:0001822
"kidney development" evidence=ISS] [GO:0001944 "vasculature
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007530 "sex determination" evidence=ISS] [GO:0014707
"branchiomeric skeletal muscle development" evidence=ISS]
[GO:0030855 "epithelial cell differentiation" evidence=ISS]
[GO:0032835 "glomerulus development" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=ISS] [GO:0048286 "lung alveolus development" evidence=ISS]
[GO:0048536 "spleen development" evidence=ISS] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=ISS] [GO:0048608
"reproductive structure development" evidence=ISS] [GO:0048732
"gland development" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060021 "palate development"
evidence=ISS] [GO:0060425 "lung morphogenesis" evidence=ISS]
[GO:0060426 "lung vasculature development" evidence=ISS]
[GO:0060435 "bronchiole development" evidence=ISS] [GO:0060539
"diaphragm development" evidence=ISS] [GO:0060541 "respiratory
system development" evidence=ISS] [GO:0060766 "negative regulation
of androgen receptor signaling pathway" evidence=ISS] [GO:0070888
"E-box binding" evidence=ISS] [GO:0072013 "glomus development"
evidence=IMP] [GO:0072162 "metanephric mesenchymal cell
differentiation" evidence=ISS] [GO:0072277 "metanephric glomerular
capillary formation" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0001078
GO:GO:0046983 GO:GO:0001077 GO:GO:0048286 GO:GO:0048536
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658
GO:GO:0060539 GO:GO:0070888 GO:GO:0030855 GO:GO:0060008
GO:GO:0007530 GO:GO:0060766 GO:GO:0060426 GO:GO:0048557
GO:GO:0060425 GO:GO:0048732 GO:GO:0072013 GO:GO:0060435
GO:GO:0014707 GO:GO:0072162 GO:GO:0072277 CTD:6943 EMBL:AY660871
EMBL:BC073597 RefSeq:NP_001085957.1 UniGene:Xl.47492
ProteinModelPortal:Q6GNB7 GeneID:444386 KEGG:xla:444386
Xenbase:XB-GENE-484809 Uniprot:Q6GNB7
Length = 179
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 68 AMGSLQPLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIA 126
A PL N++GK V+ N NARER RM L+ A L+ +P+ P KLSK+
Sbjct: 62 ASSKKSPLGTINQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLD 119
Query: 127 TLLLAKNYI 135
TL LA +YI
Sbjct: 120 TLRLASSYI 128
>RGD|1304957 [details] [associations]
symbol:Atoh7 "atonal homolog 7 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0007623 "circadian rhythm"
evidence=IEA;ISO] [GO:0009649 "entrainment of circadian clock"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1304957 GO:GO:0009649 GO:GO:0007623
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
KO:K09083 CTD:220202 OMA:HYLPFAG OrthoDB:EOG4N30QJ IPI:IPI00214569
RefSeq:NP_001163953.1 UniGene:Rn.222427 Ensembl:ENSRNOT00000000432
GeneID:365564 KEGG:rno:365564 UCSC:RGD:1304957 NextBio:687663
Uniprot:D3ZG53
Length = 149
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
RL NARERRRM LN A D LR V+P +KLSK TL +A +YI+ L E
Sbjct: 43 RLAANARERRRMQGLNTAFDRLRRVVPQWGQD--KKLSKYETLQMALSYIVALTRILAEA 100
Query: 146 RR 147
R
Sbjct: 101 ER 102
>ZFIN|ZDB-GENE-050208-498 [details] [associations]
symbol:si:ch211-246m6.4 "si:ch211-246m6.4"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-050208-498
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:BX649296
GeneTree:ENSGT00690000101643 RefSeq:XP_001340709.1
Ensembl:ENSDART00000140323 GeneID:100000527 Uniprot:K7DYE4
Length = 193
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/53 (54%), Positives = 33/53 (62%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R H +N A LR +IP P+ RKLSKI TL LA +YI AN L
Sbjct: 89 NARERDRTHSVNTAFTSLRTLIPT--EPADRKLSKIETLRLASSYISHLANVL 139
>UNIPROTKB|A7Z095 [details] [associations]
symbol:TWIST3 "Twist3" species:9031 "Gallus gallus"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101840
HOVERGEN:HBG019071 InterPro:IPR015789 PANTHER:PTHR23349:SF6
KO:K09069 HOGENOM:HOG000261629 EMBL:AADN02072407 EMBL:BK006265
IPI:IPI00595254 RefSeq:NP_001096684.1 UniGene:Gga.12350
ProteinModelPortal:A7Z095 Ensembl:ENSGALT00000010219 GeneID:426886
KEGG:gga:426886 CTD:30176 eggNOG:NOG315731 OMA:CPDSPED
OrthoDB:EOG4Q84ZS NextBio:20828285 Uniprot:A7Z095
Length = 161
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 36/79 (45%), Positives = 42/79 (53%)
Query: 74 PLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKN 133
P+ + T R+ N RER+R LNDA ELR +IP PS KLSKI TL LA
Sbjct: 57 PVPQSFEDVHTQRVIANVRERQRTQSLNDAFAELRKIIPTL--PS-DKLSKIQTLKLAAR 113
Query: 134 YI--LMQANALEELRRIIT 150
YI L Q +EL IT
Sbjct: 114 YIDFLYQVLQSDELDHKIT 132
>UNIPROTKB|F1NX34 [details] [associations]
symbol:F1NX34 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0042667
"auditory receptor cell fate specification" evidence=IEA]
[GO:0042668 "auditory receptor cell fate determination"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045609 "positive regulation of auditory receptor
cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0043565
GO:GO:0045944 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 GO:GO:0031490 EMBL:AADN02016072
EMBL:AADN02016071 IPI:IPI00822197 Ensembl:ENSGALT00000038348
OMA:PARTRFP Uniprot:F1NX34
Length = 175
Score = 113 (44.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 80 RQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA 139
R + RL NA+++RRMH LN A D+LR VIP ++ +KLSK TL +A+ YI A
Sbjct: 2 RAAEQRRLRANAQKQRRMHVLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQIYISALA 59
Query: 140 NAL 142
L
Sbjct: 60 ELL 62
>WB|WBGene00003018 [details] [associations]
symbol:lin-32 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048666 "neuron development" evidence=IGI;IMP] [GO:0051179
"localization" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009792 GO:GO:0043565 GO:GO:0048666
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG267878
GeneTree:ENSGT00680000099574 GO:GO:0045138 KO:K09083 GO:GO:0051179
EMBL:FO081076 EMBL:U15418 PIR:T29378 RefSeq:NP_508410.2
UniGene:Cel.662 ProteinModelPortal:Q10574 SMR:Q10574 IntAct:Q10574
STRING:Q10574 EnsemblMetazoa:T14F9.5 GeneID:191703
KEGG:cel:CELE_T14F9.5 UCSC:T14F9.5 CTD:191703 WormBase:T14F9.5
HOGENOM:HOG000020160 InParanoid:Q10574 OMA:CRRYKTP NextBio:950028
Uniprot:Q10574
Length = 142
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
N RERRRM+ LN A DELR V+P S +KLSK TL +A+ YI + L++
Sbjct: 78 NERERRRMNTLNVAYDELREVLPEIDSG--KKLSKFETLQMAQKYIECLSQILKQ 130
>FB|FBgn0037937 [details] [associations]
symbol:Fer3 "48 related 3" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
eggNOG:NOG273146 EMBL:AF369898 EMBL:AF517123 EMBL:AM294883
EMBL:AM294884 EMBL:AM294885 EMBL:AM294886 EMBL:AM294887
EMBL:AM294888 EMBL:AM294889 EMBL:AM294890 EMBL:AM294891
EMBL:AM294892 EMBL:AM294893 EMBL:AM294894 EMBL:AY094777
RefSeq:NP_524322.1 UniGene:Dm.14136 ProteinModelPortal:Q9VGJ5
SMR:Q9VGJ5 IntAct:Q9VGJ5 MINT:MINT-755043
EnsemblMetazoa:FBtr0082435 GeneID:41411 KEGG:dme:Dmel_CG6913
CTD:41411 FlyBase:FBgn0037937 InParanoid:Q9VGJ5 OMA:YQRDFAS
OrthoDB:EOG42Z36K PhylomeDB:Q9VGJ5 GenomeRNAi:41411 NextBio:823730
Bgee:Q9VGJ5 Uniprot:Q9VGJ5
Length = 195
Score = 114 (45.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 61 QDPTHSGAMGSLQPLAKKNRQ---GKTVRLNINARERRRMHDLNDALDELRAVIP-YAHS 116
Q P+ +G +KK R+ R N RERRRM +LN+A D+LR +P +A+
Sbjct: 60 QRPSTNGRANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYE 119
Query: 117 PSVRKLSKIATLLLAKNYILMQANAL 142
++LS+I TL LA YI A L
Sbjct: 120 ---KRLSRIETLRLAITYIGFMAELL 142
>UNIPROTKB|Q5E9S3 [details] [associations]
symbol:TCF21 "Transcription factor 21" species:9913 "Bos
taurus" [GO:0048732 "gland development" evidence=ISS] [GO:0060426
"lung vasculature development" evidence=ISS] [GO:0048608
"reproductive structure development" evidence=ISS] [GO:0001944
"vasculature development" evidence=ISS] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISS] [GO:0060008 "Sertoli
cell differentiation" evidence=ISS] [GO:0060541 "respiratory system
development" evidence=ISS] [GO:0060435 "bronchiole development"
evidence=ISS] [GO:0060425 "lung morphogenesis" evidence=ISS]
[GO:0048286 "lung alveolus development" evidence=ISS] [GO:0032835
"glomerulus development" evidence=ISS] [GO:0030855 "epithelial cell
differentiation" evidence=ISS] [GO:0007530 "sex determination"
evidence=ISS] [GO:0001763 "morphogenesis of a branching structure"
evidence=ISS] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0001657 "ureteric bud development"
evidence=ISS] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0072277 "metanephric glomerular capillary formation"
evidence=ISS] [GO:0072162 "metanephric mesenchymal cell
differentiation" evidence=ISS] [GO:0060539 "diaphragm development"
evidence=ISS] [GO:0060021 "palate development" evidence=ISS]
[GO:0048536 "spleen development" evidence=ISS] [GO:0014707
"branchiomeric skeletal muscle development" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0001078 GO:GO:0001077
GO:GO:0048286 GO:GO:0048536 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0060021 GO:GO:0001658 GO:GO:0060539 GO:GO:0070888
GO:GO:0030855 GO:GO:0060008 GO:GO:0007530 GO:GO:0060766
GO:GO:0060426 GO:GO:0048557 GO:GO:0060425 GO:GO:0048732
GO:GO:0060435 HOGENOM:HOG000261670 HOVERGEN:HBG105298 GO:GO:0014707
GeneTree:ENSGT00690000101840 GO:GO:0072162 GO:GO:0072277
EMBL:BT020847 EMBL:BC105574 IPI:IPI00709726 RefSeq:NP_001014899.1
UniGene:Bt.5219 ProteinModelPortal:Q5E9S3
Ensembl:ENSBTAT00000029098 GeneID:510873 KEGG:bta:510873 CTD:6943
eggNOG:NOG235686 InParanoid:Q5E9S3 OMA:ESSNCET OrthoDB:EOG4BZN40
NextBio:20869660 Uniprot:Q5E9S3
Length = 179
Score = 113 (44.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>UNIPROTKB|J9PAD9 [details] [associations]
symbol:TCF21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101840 CTD:6943 EMBL:AAEX03000184
RefSeq:XP_541110.3 ProteinModelPortal:J9PAD9
Ensembl:ENSCAFT00000048871 GeneID:483993 KEGG:cfa:483993
Uniprot:J9PAD9
Length = 179
Score = 113 (44.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>UNIPROTKB|O43680 [details] [associations]
symbol:TCF21 "Transcription factor 21" species:9606 "Homo
sapiens" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0046983 "protein
dimerization activity" evidence=ISS] [GO:0043425 "bHLH
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0014707
"branchiomeric skeletal muscle development" evidence=ISS]
[GO:0048536 "spleen development" evidence=ISS] [GO:0060021 "palate
development" evidence=ISS] [GO:0060539 "diaphragm development"
evidence=ISS] [GO:0072162 "metanephric mesenchymal cell
differentiation" evidence=ISS] [GO:0072277 "metanephric glomerular
capillary formation" evidence=ISS] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0007530 "sex determination"
evidence=ISS] [GO:0032835 "glomerulus development" evidence=ISS]
[GO:0048286 "lung alveolus development" evidence=ISS] [GO:0048608
"reproductive structure development" evidence=ISS] [GO:0060426
"lung vasculature development" evidence=ISS] [GO:0060435
"bronchiole development" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=ISS] [GO:0048732 "gland development"
evidence=ISS] [GO:0030855 "epithelial cell differentiation"
evidence=ISS] [GO:0060425 "lung morphogenesis" evidence=ISS]
[GO:0060541 "respiratory system development" evidence=ISS]
[GO:0070888 "E-box binding" evidence=ISS] [GO:0050681 "androgen
receptor binding" evidence=ISS] [GO:0060766 "negative regulation of
androgen receptor signaling pathway" evidence=ISS] [GO:0001944
"vasculature development" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0001763 "morphogenesis of a
branching structure" evidence=ISS] [GO:0001657 "ureteric bud
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CH471051 GO:GO:0001078 GO:GO:0046983 GO:GO:0001077
GO:GO:0048286 GO:GO:0048536 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0060021 GO:GO:0050681 GO:GO:0001658 GO:GO:0060539
GO:GO:0070888 GO:GO:0030855 GO:GO:0060008 GO:GO:0007530
GO:GO:0060766 GO:GO:0060426 GO:GO:0048557 GO:GO:0060425
GO:GO:0048732 GO:GO:0060435 HOGENOM:HOG000261670 HOVERGEN:HBG105298
GO:GO:0014707 GO:GO:0072162 GO:GO:0072277 CTD:6943 eggNOG:NOG235686
OMA:ESSNCET OrthoDB:EOG4BZN40 EMBL:AF047419 EMBL:AF035718
EMBL:BT019660 EMBL:CR450293 EMBL:AL356109 EMBL:BC025697
IPI:IPI00306587 RefSeq:NP_003197.2 RefSeq:NP_938206.1
UniGene:Hs.78061 ProteinModelPortal:O43680 SMR:O43680 IntAct:O43680
MINT:MINT-1180543 STRING:O43680 PhosphoSite:O43680 PRIDE:O43680
DNASU:6943 Ensembl:ENST00000237316 Ensembl:ENST00000367882
GeneID:6943 KEGG:hsa:6943 UCSC:uc003qei.4 GeneCards:GC06P134251
HGNC:HGNC:11632 HPA:HPA013189 MIM:603306 neXtProt:NX_O43680
PharmGKB:PA36387 InParanoid:O43680 GenomeRNAi:6943 NextBio:27179
Bgee:O43680 CleanEx:HS_TCF21 Genevestigator:O43680
GermOnline:ENSG00000118526 Uniprot:O43680
Length = 179
Score = 113 (44.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>MGI|MGI:1202715 [details] [associations]
symbol:Tcf21 "transcription factor 21" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO;IDA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:0001763
"morphogenesis of a branching structure" evidence=IMP] [GO:0001822
"kidney development" evidence=IMP] [GO:0001944 "vasculature
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007530 "sex determination"
evidence=IMP] [GO:0007548 "sex differentiation" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IGI]
[GO:0030855 "epithelial cell differentiation" evidence=IMP]
[GO:0031063 "regulation of histone deacetylation" evidence=IC]
[GO:0032835 "glomerulus development" evidence=IMP] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0048286 "lung alveolus development" evidence=IMP]
[GO:0048536 "spleen development" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=ISO] [GO:0048608
"reproductive structure development" evidence=IMP] [GO:0048732
"gland development" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IPI] [GO:0060008 "Sertoli cell differentiation"
evidence=ISO] [GO:0060021 "palate development" evidence=IGI]
[GO:0060425 "lung morphogenesis" evidence=IMP] [GO:0060426 "lung
vasculature development" evidence=IMP] [GO:0060435 "bronchiole
development" evidence=IMP] [GO:0060539 "diaphragm development"
evidence=IGI] [GO:0060541 "respiratory system development"
evidence=IMP] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0070888 "E-box binding"
evidence=IDA] [GO:0072162 "metanephric mesenchymal cell
differentiation" evidence=IMP] [GO:0072277 "metanephric glomerular
capillary formation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:1202715 GO:GO:0005634
GO:GO:0001078 GO:GO:0001077 GO:GO:0048286 GO:GO:0048536
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658
GO:GO:0060539 GO:GO:0070888 GO:GO:0030855 GO:GO:0060008
GO:GO:0007530 GO:GO:0060766 GO:GO:0060426 GO:GO:0048557
GO:GO:0060425 GO:GO:0048732 GO:GO:0060435 HOGENOM:HOG000261670
HOVERGEN:HBG105298 GO:GO:0014707 GeneTree:ENSGT00690000101840
GO:GO:0072162 GO:GO:0072277 GO:GO:0031063 CTD:6943 eggNOG:NOG235686
OMA:ESSNCET OrthoDB:EOG4BZN40 EMBL:AF029753 EMBL:AF047418
EMBL:AF036945 EMBL:AF035717 EMBL:AB009453 EMBL:AK011575
EMBL:AK135423 EMBL:AK157289 EMBL:BC053525 IPI:IPI00130736
RefSeq:NP_035675.1 UniGene:Mm.16497 ProteinModelPortal:O35437
SMR:O35437 IntAct:O35437 MINT:MINT-218623 STRING:O35437
PhosphoSite:O35437 PRIDE:O35437 Ensembl:ENSMUST00000049930
GeneID:21412 KEGG:mmu:21412 UCSC:uc007eps.1 InParanoid:O35437
NextBio:300696 Bgee:O35437 CleanEx:MM_TCF21 Genevestigator:O35437
GermOnline:ENSMUSG00000045680 Uniprot:O35437
Length = 179
Score = 113 (44.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>RGD|620523 [details] [associations]
symbol:Tcf21 "transcription factor 21" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;ISS] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO;ISS] [GO:0001657
"ureteric bud development" evidence=ISO;ISS] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO;ISS]
[GO:0001763 "morphogenesis of a branching structure"
evidence=ISO;ISS] [GO:0001822 "kidney development" evidence=ISO]
[GO:0001944 "vasculature development" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0007530 "sex determination"
evidence=ISO;ISS] [GO:0007548 "sex differentiation" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0014707
"branchiomeric skeletal muscle development" evidence=ISO;ISS]
[GO:0030855 "epithelial cell differentiation" evidence=ISO;ISS]
[GO:0032835 "glomerulus development" evidence=ISO;ISS] [GO:0042826
"histone deacetylase binding" evidence=IEA;ISO] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0048286 "lung alveolus development"
evidence=ISO;ISS] [GO:0048536 "spleen development"
evidence=ISO;ISS] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IMP] [GO:0048608 "reproductive structure
development" evidence=ISO;ISS] [GO:0048732 "gland development"
evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060008 "Sertoli cell differentiation"
evidence=IDA] [GO:0060021 "palate development" evidence=ISO;ISS]
[GO:0060425 "lung morphogenesis" evidence=ISO;ISS] [GO:0060426
"lung vasculature development" evidence=ISO;ISS] [GO:0060435
"bronchiole development" evidence=ISO;ISS] [GO:0060539 "diaphragm
development" evidence=ISO;ISS] [GO:0060541 "respiratory system
development" evidence=ISO;ISS] [GO:0060766 "negative regulation of
androgen receptor signaling pathway" evidence=ISO;ISS] [GO:0070888
"E-box binding" evidence=ISO;ISS] [GO:0072162 "metanephric
mesenchymal cell differentiation" evidence=ISO;ISS] [GO:0072277
"metanephric glomerular capillary formation" evidence=ISO;ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:620523 GO:GO:0005634 GO:GO:0001078 GO:GO:0001077 GO:GO:0048286
GO:GO:0048536 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021
GO:GO:0001658 GO:GO:0060539 GO:GO:0070888 GO:GO:0030855
GO:GO:0060008 GO:GO:0007530 EMBL:CH474002 GO:GO:0060766
GO:GO:0060426 GO:GO:0048557 GO:GO:0060425 GO:GO:0048732
GO:GO:0060435 HOGENOM:HOG000261670 HOVERGEN:HBG105298 GO:GO:0014707
GeneTree:ENSGT00690000101840 GO:GO:0072162 GO:GO:0072277 CTD:6943
OMA:ESSNCET EMBL:BC100106 IPI:IPI00198623 RefSeq:NP_001027569.1
UniGene:Rn.1671 STRING:Q498R2 Ensembl:ENSRNOT00000022798
GeneID:252856 KEGG:rno:252856 UCSC:RGD:620523 InParanoid:Q498R2
NextBio:623926 Genevestigator:Q498R2 Uniprot:Q498R2
Length = 179
Score = 113 (44.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>ZFIN|ZDB-GENE-000926-1 [details] [associations]
symbol:atoh7 "atonal homolog 7" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0050769
"positive regulation of neurogenesis" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IMP] [GO:0043010 "camera-type
eye development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IGI;IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0001654 "eye development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-000926-1 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0051726 GO:GO:0050769
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010842
GeneTree:ENSGT00680000099574 GO:GO:0045165 HOVERGEN:HBG096161
KO:K09083 CTD:220202 eggNOG:NOG320395 HOGENOM:HOG000034180
OrthoDB:EOG4N30QJ EMBL:AB049457 EMBL:AL627094 EMBL:BC071520
IPI:IPI00483429 RefSeq:NP_571707.1 UniGene:Dr.82507 HSSP:P61244
ProteinModelPortal:Q8AW52 STRING:Q8AW52 Ensembl:ENSDART00000101328
GeneID:58216 KEGG:dre:58216 InParanoid:Q8AW52 OMA:ERKRMQG
NextBio:20892405 Bgee:Q8AW52 Uniprot:Q8AW52
Length = 134
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R+ NARER+RM LN A D LR V+P +KLSK TL +A +YI+ L +
Sbjct: 30 RMAANARERKRMQGLNTAFDRLRKVVPQWGQD--KKLSKYETLQMALSYIMALNRILSDA 87
Query: 146 RR 147
R
Sbjct: 88 GR 89
>UNIPROTKB|J9JHM8 [details] [associations]
symbol:TAL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 OMA:HLPGLEN EMBL:AAEX03008018
Ensembl:ENSCAFT00000049853 Uniprot:J9JHM8
Length = 131
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/117 (35%), Positives = 55/117 (47%)
Query: 66 SGAMGSLQPLAKKNRQGKTVRL--NI------NARERRRMHDLNDALDELRAVIPYAHSP 117
SG + +KK RQ + +R N+ N RER R ++N A +LR +IP H P
Sbjct: 2 SGRLWQSSKRSKKGRQEEHLRRTSNMTRKIFTNTRERWRQQNVNSAFAKLRKLIP-THPP 60
Query: 118 SVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQGTMT--MPPGFDL-QATML 171
+KLSK TL LA YI L E T + AQG + P G L T+L
Sbjct: 61 D-KKLSKNETLRLAMRYINFLVKVLGEQTLQQTGVAAQGNILGLFPQGSHLPDRTLL 116
>UNIPROTKB|F7DSF8 [details] [associations]
symbol:F7DSF8 "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0001707 "mesoderm formation" evidence=ISS]
[GO:0001894 "tissue homeostasis" evidence=ISS] [GO:0001958
"endochondral ossification" evidence=ISS] [GO:0002062 "chondrocyte
differentiation" evidence=ISS] [GO:0003179 "heart valve
morphogenesis" evidence=ISS] [GO:0003188 "heart valve formation"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0010628 "positive regulation of
gene expression" evidence=ISS] [GO:0030154 "cell differentiation"
evidence=ISS] [GO:0030199 "collagen fibril organization"
evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
[GO:0032967 "positive regulation of collagen biosynthetic process"
evidence=ISS] [GO:0035989 "tendon development" evidence=ISS]
[GO:0035990 "tendon cell differentiation" evidence=ISS] [GO:0035992
"tendon formation" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0060008 "Sertoli cell differentiation"
evidence=ISS] [GO:0061035 "regulation of cartilage development"
evidence=ISS] [GO:0061036 "positive regulation of cartilage
development" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0043066 GO:GO:0008284 GO:GO:0043565
GO:GO:0030199 GO:GO:0032967 GO:GO:0045944 GO:GO:0006351
GO:GO:0005667 GO:GO:0001894 GO:GO:0030509 GO:GO:0001707
GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0002062
GO:GO:0070888 GO:GO:0061036 GO:GO:0035993 GO:GO:0001958
GO:GO:0035990 GO:GO:0060008 GO:GO:2000543
GeneTree:ENSGT00690000101643 GO:GO:0003188 EMBL:ACFV01144140
Ensembl:ENSCJAT00000042157 Uniprot:F7DSF8
Length = 123
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R + +N A LR +IP P+ RKLSKI TL LA +YI N L
Sbjct: 3 NARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASSYISHLGNVL 53
>MGI|MGI:99540 [details] [associations]
symbol:Tal2 "T cell acute lymphocytic leukemia 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007610 "behavior" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0021794
"thalamus development" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0035264 "multicellular organism
growth" evidence=IMP] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:99540 GO:GO:0006355 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0009791 GO:GO:0030901
GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021794
GeneTree:ENSGT00690000101643 KO:K09068 CTD:6887 eggNOG:NOG256466
HOGENOM:HOG000129920 HOVERGEN:HBG004515 OMA:HLPGLEN
OrthoDB:EOG479F8M EMBL:M81077 EMBL:AK018448 IPI:IPI00123536
RefSeq:NP_033343.1 UniGene:Mm.56955 ProteinModelPortal:Q62282
SMR:Q62282 STRING:Q62282 PhosphoSite:Q62282 PRIDE:Q62282
Ensembl:ENSMUST00000030124 GeneID:21350 KEGG:mmu:21350
InParanoid:Q62282 NextBio:300540 Bgee:Q62282 CleanEx:MM_TAL2
Genevestigator:Q62282 GermOnline:ENSMUSG00000028417 Uniprot:Q62282
Length = 108
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
T ++ N RER R +N+A +LR +IP H P +KLSK TL LA YI L
Sbjct: 2 TRKIFTNTRERWRQQSVNNAFAKLRKLIP-THPPD-KKLSKNETLRLAMRYINFLVKVLG 59
Query: 144 ELRRIITYIQAQGTMT--MPP 162
E T + AQG + PP
Sbjct: 60 EQSLHQTGVAAQGNILGLFPP 80
>ZFIN|ZDB-GENE-081104-461 [details] [associations]
symbol:ferd3l "Fer3-like (Drosophila)" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-081104-461 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 EMBL:CU638736
IPI:IPI00920294 Ensembl:ENSDART00000143231 Uniprot:F1R7I0
Length = 81
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 77 KKNRQGKTV-RLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNY 134
K+ R TV R N RER+RM LN+A D LR +P +A+ ++LS+I TL LA Y
Sbjct: 16 KRKRVISTVQRQAANIRERKRMFSLNEAFDRLRRRVPTFAYE---KRLSRIETLRLAIVY 72
Query: 135 ILMQANALE 143
I + LE
Sbjct: 73 IAFMTDILE 81
>UNIPROTKB|Q16559 [details] [associations]
symbol:TAL2 "T-cell acute lymphocytic leukemia protein 2"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0021794 "thalamus
development" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0006355 GO:GO:0003677 GO:GO:0007610
GO:GO:0006351 GO:GO:0009791 GO:GO:0030901 GO:GO:0035264
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021794 EMBL:AL158070
KO:K09068 EMBL:M81078 EMBL:S69377 EMBL:BC069422 EMBL:BC126373
EMBL:BC126375 IPI:IPI00002906 PIR:A41629 RefSeq:NP_005412.1
UniGene:Hs.247978 ProteinModelPortal:Q16559 SMR:Q16559
MINT:MINT-7242471 STRING:Q16559 PhosphoSite:Q16559 DMDM:7531207
PRIDE:Q16559 DNASU:6887 Ensembl:ENST00000334077 GeneID:6887
KEGG:hsa:6887 UCSC:uc004bct.3 CTD:6887 GeneCards:GC09P108424
HGNC:HGNC:11557 HPA:HPA030886 MIM:186855 neXtProt:NX_Q16559
PharmGKB:PA36327 eggNOG:NOG256466 HOGENOM:HOG000129920
HOVERGEN:HBG004515 InParanoid:Q16559 OMA:HLPGLEN OrthoDB:EOG479F8M
PhylomeDB:Q16559 GenomeRNAi:6887 NextBio:26913 Bgee:Q16559
CleanEx:HS_TAL2 Genevestigator:Q16559 GermOnline:ENSG00000186051
Uniprot:Q16559
Length = 108
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
T ++ N RER R ++N A +LR +IP H P +KLSK TL LA YI L
Sbjct: 2 TRKIFTNTRERWRQQNVNSAFAKLRKLIP-THPPD-KKLSKNETLRLAMRYINFLVKVLG 59
Query: 144 ELRRIITYIQAQGTM 158
E T + AQG +
Sbjct: 60 EQSLQQTGVAAQGNI 74
>RGD|1596467 [details] [associations]
symbol:Tal2 "T-cell acute lymphocytic leukemia 2" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007610
"behavior" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0021794 "thalamus development"
evidence=IEA;ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1596467 GO:GO:0007610 GO:GO:0009791 GO:GO:0030901
GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021794
GeneTree:ENSGT00690000101643 KO:K09068 CTD:6887 OMA:HLPGLEN
OrthoDB:EOG479F8M EMBL:CH474039 IPI:IPI00369041
RefSeq:NP_001102932.1 UniGene:Rn.218313 Ensembl:ENSRNOT00000035687
GeneID:685229 KEGG:rno:685229 UCSC:RGD:1596467 NextBio:729247
Uniprot:D3ZV67
Length = 108
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
T ++ N RER R +N A +LR +IP H P +KLSK TL LA YI L
Sbjct: 2 TRKIFTNTRERWRQQSVNSAFAKLRKLIP-THPPD-KKLSKNETLRLAMRYINFLVKVLG 59
Query: 144 ELRRIITYIQAQGTM 158
E T I AQG +
Sbjct: 60 EQSLQQTGIAAQGNI 74
>UNIPROTKB|E1C2X2 [details] [associations]
symbol:TAL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0021794 "thalamus development"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007610 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 EMBL:AADN02062227 IPI:IPI00578719
Ensembl:ENSGALT00000037753 OMA:VEDWTAM Uniprot:E1C2X2
Length = 111
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 34/88 (38%), Positives = 45/88 (51%)
Query: 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
T ++ N RER R ++N A +LR +IP H P +KLSK TL LA YI L
Sbjct: 2 TRKIFTNTRERWRQQNVNSAFAKLRKLIP-THPPD-KKLSKNETLRLAMRYINFLVKVLG 59
Query: 144 ELRRIITYIQAQGTMTMPPGFDLQATML 171
E T + A+G++ GF QA L
Sbjct: 60 EPGLQQTAVAARGSIL---GFLQQAPCL 84
>UNIPROTKB|E2R3U1 [details] [associations]
symbol:TCF21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048732 "gland development" evidence=ISS]
[GO:0060426 "lung vasculature development" evidence=ISS]
[GO:0048608 "reproductive structure development" evidence=ISS]
[GO:0001944 "vasculature development" evidence=ISS] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=ISS] [GO:0060541
"respiratory system development" evidence=ISS] [GO:0060435
"bronchiole development" evidence=ISS] [GO:0060425 "lung
morphogenesis" evidence=ISS] [GO:0048286 "lung alveolus
development" evidence=ISS] [GO:0032835 "glomerulus development"
evidence=ISS] [GO:0030855 "epithelial cell differentiation"
evidence=ISS] [GO:0007530 "sex determination" evidence=ISS]
[GO:0060008 "Sertoli cell differentiation" evidence=ISS]
[GO:0001763 "morphogenesis of a branching structure" evidence=ISS]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0072277 "metanephric glomerular capillary formation"
evidence=ISS] [GO:0072162 "metanephric mesenchymal cell
differentiation" evidence=ISS] [GO:0060539 "diaphragm development"
evidence=ISS] [GO:0060021 "palate development" evidence=ISS]
[GO:0048536 "spleen development" evidence=ISS] [GO:0014707
"branchiomeric skeletal muscle development" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0001078 GO:GO:0001077 GO:GO:0048286 GO:GO:0048536
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658
GO:GO:0060539 GO:GO:0070888 GO:GO:0030855 GO:GO:0060008
GO:GO:0007530 GO:GO:0060766 GO:GO:0060426 GO:GO:0048557
GO:GO:0060425 GO:GO:0048732 GO:GO:0060435 GO:GO:0014707
GeneTree:ENSGT00690000101840 GO:GO:0072162 GO:GO:0072277
OMA:ACANDER EMBL:AAEX03000184 Ensembl:ENSCAFT00000000328
NextBio:20858267 Uniprot:E2R3U1
Length = 261
Score = 113 (44.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL+ +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 151 PLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 208
Query: 133 NYI 135
+YI
Sbjct: 209 SYI 211
>UNIPROTKB|E1BUB8 [details] [associations]
symbol:TCF21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISS] [GO:0014707 "branchiomeric skeletal muscle
development" evidence=ISS] [GO:0048536 "spleen development"
evidence=ISS] [GO:0060021 "palate development" evidence=ISS]
[GO:0060539 "diaphragm development" evidence=ISS] [GO:0072162
"metanephric mesenchymal cell differentiation" evidence=ISS]
[GO:0072277 "metanephric glomerular capillary formation"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0070888 "E-box binding" evidence=ISS] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:0060008 "Sertoli cell differentiation" evidence=ISS]
[GO:0001763 "morphogenesis of a branching structure" evidence=ISS]
[GO:0001944 "vasculature development" evidence=ISS] [GO:0007530
"sex determination" evidence=ISS] [GO:0030855 "epithelial cell
differentiation" evidence=ISS] [GO:0032835 "glomerulus development"
evidence=ISS] [GO:0048608 "reproductive structure development"
evidence=ISS] [GO:0060425 "lung morphogenesis" evidence=ISS]
[GO:0060426 "lung vasculature development" evidence=ISS]
[GO:0060435 "bronchiole development" evidence=ISS] [GO:0060541
"respiratory system development" evidence=ISS] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=ISS] [GO:0048732
"gland development" evidence=ISS] [GO:0048286 "lung alveolus
development" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0001078
GO:GO:0001077 GO:GO:0048286 GO:GO:0048536 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658 GO:GO:0060539
GO:GO:0070888 GO:GO:0030855 GO:GO:0060008 GO:GO:0007530
GO:GO:0060766 GO:GO:0060426 GO:GO:0048557 GO:GO:0060425
GO:GO:0048732 GO:GO:0060435 GO:GO:0014707
GeneTree:ENSGT00690000101840 GO:GO:0072162 GO:GO:0072277 CTD:6943
OMA:ESSNCET EMBL:AADN02025537 IPI:IPI00571211 RefSeq:XP_419734.1
UniGene:Gga.8241 PRIDE:E1BUB8 Ensembl:ENSGALT00000022657
GeneID:421697 KEGG:gga:421697 NextBio:20824430 Uniprot:E1BUB8
Length = 179
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 74 PLAKKNRQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAK 132
PL +++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA
Sbjct: 68 PLNGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLAS 125
Query: 133 NYI 135
+YI
Sbjct: 126 SYI 128
>UNIPROTKB|A4IFM6 [details] [associations]
symbol:TWIST2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0008285 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0032720
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325
GO:GO:0061303 GO:GO:0048701 GO:GO:0045668 GO:GO:0001076
GO:GO:0045638 GO:GO:0043392 GO:GO:0010838
GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 OMA:DNKMSSC
EMBL:DAAA02009403 EMBL:DAAA02009404 EMBL:DAAA02009405
EMBL:DAAA02009406 EMBL:DAAA02009407 EMBL:DAAA02009408 EMBL:BC134662
IPI:IPI00704219 RefSeq:NP_001077217.1 UniGene:Bt.87327 SMR:A4IFM6
STRING:A4IFM6 Ensembl:ENSBTAT00000028589 GeneID:540060
KEGG:bta:540060 InParanoid:A4IFM6 NextBio:20878390 Uniprot:A4IFM6
Length = 160
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G GS P A+ + ++ R+ N RER+R LN+A LR +IP PS KL
Sbjct: 47 PGKRGKKGS--PSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DKL 101
Query: 123 SKIATLLLAKNYI--LMQANALEELRRIIT 150
SKI TL LA YI L Q +E+ +T
Sbjct: 102 SKIQTLKLAARYIDFLYQVLQSDEMDNKMT 131
>UNIPROTKB|E2RQT1 [details] [associations]
symbol:TWIST2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061303 "cornea development in camera-type
eye" evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0008285 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0032720
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325
GO:GO:0061303 GO:GO:0048701 GO:GO:0045668 GO:GO:0001076
GO:GO:0045638 GO:GO:0043392 GO:GO:0010838
GeneTree:ENSGT00690000101840 InterPro:IPR015789
PANTHER:PTHR23349:SF6 KO:K09069 CTD:117581 OMA:DNKMSSC
EMBL:AAEX03014505 RefSeq:XP_543311.1 ProteinModelPortal:E2RQT1
SMR:E2RQT1 Ensembl:ENSCAFT00000019798 GeneID:486185 KEGG:cfa:486185
NextBio:20860008 Uniprot:E2RQT1
Length = 160
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G GS P A+ + ++ R+ N RER+R LN+A LR +IP PS KL
Sbjct: 47 PGKRGKKGS--PSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DKL 101
Query: 123 SKIATLLLAKNYI--LMQANALEELRRIIT 150
SKI TL LA YI L Q +E+ +T
Sbjct: 102 SKIQTLKLAARYIDFLYQVLQSDEMDNKMT 131
>UNIPROTKB|Q8WVJ9 [details] [associations]
symbol:TWIST2 "Twist-related protein 2" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0010838
"positive regulation of keratinocyte proliferation" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043392 "negative regulation
of DNA binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0048701 "embryonic
cranial skeleton morphogenesis" evidence=IEA] [GO:0060325 "face
morphogenesis" evidence=IEA] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0008285
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001649 GO:GO:0060325 GO:GO:0061303 GO:GO:0048701
GO:GO:0045668 GO:GO:0001076 GO:GO:0045638 GO:GO:0043392
GO:GO:0010838 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J EMBL:BC017907 EMBL:BC033168
EMBL:BC103755 IPI:IPI00103145 RefSeq:NP_001258822.1
RefSeq:NP_476527.1 UniGene:Hs.422585 ProteinModelPortal:Q8WVJ9
SMR:Q8WVJ9 IntAct:Q8WVJ9 STRING:Q8WVJ9 PhosphoSite:Q8WVJ9
DMDM:32699724 PRIDE:Q8WVJ9 DNASU:117581 Ensembl:ENST00000448943
GeneID:117581 KEGG:hsa:117581 UCSC:uc010znx.2 CTD:117581
GeneCards:GC02P239757 HGNC:HGNC:20670 MIM:227260 MIM:607556
neXtProt:NX_Q8WVJ9 Orphanet:1807 PharmGKB:PA134973713 OMA:DNKMSSC
GenomeRNAi:117581 NextBio:80218 Bgee:Q8WVJ9 CleanEx:HS_TWIST2
Genevestigator:Q8WVJ9 Uniprot:Q8WVJ9
Length = 160
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G GS P A+ + ++ R+ N RER+R LN+A LR +IP PS KL
Sbjct: 47 PGKRGKKGS--PSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DKL 101
Query: 123 SKIATLLLAKNYI--LMQANALEELRRIIT 150
SKI TL LA YI L Q +E+ +T
Sbjct: 102 SKIQTLKLAARYIDFLYQVLQSDEMDNKMT 131
>UNIPROTKB|F2Z5R9 [details] [associations]
symbol:TWIST2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0008285 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0032720
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325
GO:GO:0061303 GO:GO:0048701 GO:GO:0045668 GO:GO:0001076
GO:GO:0045638 GO:GO:0043392 GO:GO:0010838
GeneTree:ENSGT00690000101840 InterPro:IPR015789
PANTHER:PTHR23349:SF6 KO:K09069 OMA:DNKMSSC EMBL:CU972369
RefSeq:XP_003133824.1 UniGene:Ssc.24416 ProteinModelPortal:F2Z5R9
SMR:F2Z5R9 Ensembl:ENSSSCT00000017798 GeneID:100519927
KEGG:ssc:100519927 Uniprot:F2Z5R9
Length = 160
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G GS P A+ + ++ R+ N RER+R LN+A LR +IP PS KL
Sbjct: 47 PGKRGKKGS--PSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DKL 101
Query: 123 SKIATLLLAKNYI--LMQANALEELRRIIT 150
SKI TL LA YI L Q +E+ +T
Sbjct: 102 SKIQTLKLAARYIDFLYQVLQSDEMDNKMT 131
>MGI|MGI:104685 [details] [associations]
symbol:Twist2 "twist basic helix-loop-helix transcription
factor 2" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0001076 "RNA polymerase II transcription
factor binding transcription factor activity" evidence=IDA]
[GO:0001649 "osteoblast differentiation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010838 "positive regulation of keratinocyte
proliferation" evidence=IMP] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IGI;IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IDA] [GO:0044092
"negative regulation of molecular function" evidence=IDA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IMP] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=ISO;IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IGI] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0061303 "cornea development in
camera-type eye" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:104685 GO:GO:0005737
GO:GO:0008285 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325 GO:GO:0061303
GO:GO:0048701 GO:GO:0045668 GO:GO:0001076 GO:GO:0045638
GO:GO:0043392 GO:GO:0010838 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 EMBL:U36384
EMBL:AK011861 EMBL:AK011180 IPI:IPI00172358 RefSeq:NP_031881.1
UniGene:Mm.9474 ProteinModelPortal:Q9D030 SMR:Q9D030 IntAct:Q9D030
STRING:Q9D030 PhosphoSite:Q9D030 PRIDE:Q9D030 GeneID:13345
KEGG:mmu:13345 InParanoid:Q9D030 NextBio:283658 CleanEx:MM_TWIST2
Genevestigator:Q9D030 GermOnline:ENSMUSG00000007805 Uniprot:Q9D030
Length = 160
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G GS P A+ + ++ R+ N RER+R LN+A LR +IP PS KL
Sbjct: 47 PGKRGKKGS--PSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DKL 101
Query: 123 SKIATLLLAKNYI--LMQANALEELRRIIT 150
SKI TL LA YI L Q +E+ +T
Sbjct: 102 SKIQTLKLAARYIDFLYQVLQSDEMDNKMT 131
>RGD|621286 [details] [associations]
symbol:Twist2 "twist basic helix-loop-helix transcription factor
2" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0001076 "RNA polymerase II transcription
factor binding transcription factor activity" evidence=IEA;ISO]
[GO:0001649 "osteoblast differentiation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010838 "positive regulation
of keratinocyte proliferation" evidence=IEA;ISO] [GO:0019904
"protein domain specific binding" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IEA;ISO] [GO:0044092 "negative regulation of
molecular function" evidence=ISO] [GO:0045638 "negative regulation
of myeloid cell differentiation" evidence=IEA;ISO] [GO:0045668
"negative regulation of osteoblast differentiation"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0060325 "face morphogenesis" evidence=IEA;ISO] [GO:0061303
"cornea development in camera-type eye" evidence=IEA;ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:621286 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0043066
GO:GO:0008285 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325 GO:GO:0061303
GO:GO:0048701 GO:GO:0045668 GO:GO:0001076 GO:GO:0045638
GO:GO:0043392 GO:GO:0010838 GeneTree:ENSGT00690000101840
HOVERGEN:HBG019071 InterPro:IPR015789 PANTHER:PTHR23349:SF6
eggNOG:NOG258515 KO:K09069 HOGENOM:HOG000261629 OrthoDB:EOG434W7J
CTD:117581 OMA:DNKMSSC EMBL:Y08139 IPI:IPI00208640
RefSeq:NP_067723.1 UniGene:Rn.16279 ProteinModelPortal:P97831
SMR:P97831 STRING:P97831 PhosphoSite:P97831
Ensembl:ENSRNOT00000027597 GeneID:59327 KEGG:rno:59327
InParanoid:P97831 NextBio:611925 Genevestigator:P97831
GermOnline:ENSRNOG00000020355 Uniprot:P97831
Length = 160
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G GS P A+ + ++ R+ N RER+R LN+A LR +IP PS KL
Sbjct: 47 PGKRGKKGS--PSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DKL 101
Query: 123 SKIATLLLAKNYI--LMQANALEELRRIIT 150
SKI TL LA YI L Q +E+ +T
Sbjct: 102 SKIQTLKLAARYIDFLYQVLQSDEMDNKMT 131
>UNIPROTKB|H7BY00 [details] [associations]
symbol:TWIST1 "Twist-related protein 1" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC004744 InterPro:IPR015789
PANTHER:PTHR23349:SF6 EMBL:AC003986 HGNC:HGNC:12428 ChiTaRS:TWIST1
EMBL:AC003073 ProteinModelPortal:H7BY00 Ensembl:ENST00000354571
Uniprot:H7BY00
Length = 135
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 40 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVL 96
Query: 141 ALEEL 145
+EL
Sbjct: 97 QSDEL 101
>UNIPROTKB|E1B9U0 [details] [associations]
symbol:SCXA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0035993 "deltoid tuberosity development" evidence=ISS]
[GO:0003188 "heart valve formation" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0035990 "tendon cell
differentiation" evidence=ISS] [GO:0035992 "tendon formation"
evidence=ISS] [GO:0035989 "tendon development" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0002062
"chondrocyte differentiation" evidence=ISS] [GO:0001958
"endochondral ossification" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0001894 "tissue homeostasis"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=ISS]
[GO:0061035 "regulation of cartilage development" evidence=ISS]
[GO:0032967 "positive regulation of collagen biosynthetic process"
evidence=ISS] [GO:0030199 "collagen fibril organization"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0001707 "mesoderm formation" evidence=ISS] [GO:0070888 "E-box
binding" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0010628 "positive regulation of gene
expression" evidence=ISS] [GO:0061036 "positive regulation of
cartilage development" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEA] [GO:0071260 "cellular response
to mechanical stimulus" evidence=IEA] [GO:0061056 "sclerotome
development" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0045892 GO:GO:0043066
GO:GO:0071560 GO:GO:0008284 GO:GO:0043565 GO:GO:0030199
GO:GO:0032967 GO:GO:0045944 GO:GO:0006351 GO:GO:0005667
GO:GO:0001894 GO:GO:0030509 GO:GO:0071773 GO:GO:0001707
GO:GO:0046982 GO:GO:0071260 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0002062 GO:GO:0060325 GO:GO:0070888 GO:GO:0048706
GO:GO:0061036 GO:GO:0035993 GO:GO:0001958 GO:GO:0035990
GO:GO:0060008 GO:GO:2000543 GeneTree:ENSGT00690000101643
GO:GO:0061056 OMA:GSDEKPC GO:GO:0003188 EMBL:DAAA02037448
IPI:IPI00707760 Ensembl:ENSBTAT00000012942 Uniprot:E1B9U0
Length = 221
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/76 (43%), Positives = 41/76 (53%)
Query: 67 GAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIA 126
G G L P + R+ + R NARER R + +N A LR +IP P+ RKLSKI
Sbjct: 62 GGSG-LGPGGRPGREPRQ-RHTANARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIE 117
Query: 127 TLLLAKNYILMQANAL 142
TL LA +YI N L
Sbjct: 118 TLRLASSYISHLGNVL 133
>UNIPROTKB|F1MFN4 [details] [associations]
symbol:FERD3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0045892 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 CTD:222894 OMA:HPLLCDF
EMBL:DAAA02010097 IPI:IPI00694500 RefSeq:XP_002686749.1
RefSeq:XP_584097.1 UniGene:Bt.87336 Ensembl:ENSBTAT00000057534
GeneID:538985 KEGG:bta:538985 NextBio:20877708 Uniprot:F1MFN4
Length = 164
Score = 108 (43.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 90 NARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQANALEELRR 147
N RER+RM +LN+A D+LR +P +A+ ++LS+I TL LA YI LE L +
Sbjct: 106 NIRERKRMFNLNEAFDQLRRKVPTFAYE---KRLSRIETLRLAIVYISFMTELLESLEK 161
>RGD|621709 [details] [associations]
symbol:Ptf1a "pancreas specific transcription factor, 1a"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=ISO;ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005622
"intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA;TAS] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0009790 "embryo development" evidence=ISO;ISS] [GO:0009888
"tissue development" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030902 "hindbrain development"
evidence=ISO;ISS] [GO:0031016 "pancreas development" evidence=ISO]
[GO:0031017 "exocrine pancreas development" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048384 "retinoic acid
receptor signaling pathway" evidence=ISO;ISS] [GO:0048663 "neuron
fate commitment" evidence=IEA;ISO] [GO:0048699 "generation of
neurons" evidence=ISO;ISS] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA;ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:621709 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0005667 GO:GO:0001077 GO:GO:0009790 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0030902 GO:GO:0048384
GeneTree:ENSGT00680000099574 GO:GO:0048663 GO:GO:0048699
GO:GO:0031017 GO:GO:0009888 GO:GO:0060042 CTD:256297
eggNOG:NOG288112 HOGENOM:HOG000231913 HOVERGEN:HBG082224 KO:K09073
OMA:HQLHEYC OrthoDB:EOG4RXZ16 EMBL:X98170 EMBL:X98446
IPI:IPI00211617 PIR:S71755 RefSeq:NP_446416.1 UniGene:Rn.10536
ProteinModelPortal:Q64305 STRING:Q64305 Ensembl:ENSRNOT00000022727
GeneID:117034 KEGG:rno:117034 UCSC:RGD:621709 InParanoid:Q64305
NextBio:619821 Genevestigator:Q64305 GermOnline:ENSRNOG00000016902
Uniprot:Q64305
Length = 326
Score = 113 (44.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 50 CPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKT------VRLNINARERRRMHDLNDA 103
C LS +R + +GA + A++ R+ ++ +R N RERRRM +NDA
Sbjct: 124 CTAVLSPGTRLRGL--NGAAAAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDA 181
Query: 104 LDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQGT 157
+ LR+ IP P ++LSK+ TL LA YI N L EL + ++ GT
Sbjct: 182 FEGLRSHIPTL--PYEKRLSKVDTLRLAIGYI----NFLSELVQADLPLRGSGT 229
>ZFIN|ZDB-GENE-040115-1 [details] [associations]
symbol:tal2 "T-cell acute lymphocytic leukemia 2"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IEP] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-040115-1 GO:GO:0007420
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021514 HOVERGEN:HBG004515
EMBL:AY283577 IPI:IPI00570125 UniGene:Dr.114828 UniGene:Dr.162249
ProteinModelPortal:Q6WIH0 STRING:Q6WIH0 InParanoid:Q6WIH0
Uniprot:Q6WIH0
Length = 109
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/60 (45%), Positives = 33/60 (55%)
Query: 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
T ++ N RER R H++N A ELR +IP H P +KLSK L LA YI LE
Sbjct: 2 TRKVFTNTRERWRQHNVNTAFAELRKLIP-THPPE-KKLSKNEILRLAMRYINFLVTLLE 59
>UNIPROTKB|I3LDS7 [details] [associations]
symbol:I3LDS7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
Ensembl:ENSSSCT00000022587 OMA:PASSEDY Uniprot:I3LDS7
Length = 200
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 77 KKNRQGKTVR----LNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLA 131
++ R+G+++R + N RER RMH+LN ALD LR+V+P P KL+KI TL A
Sbjct: 55 RRRRRGRSLRRSRRVKANDRERNRMHNLNAALDALRSVLP--SFPDDSKLTKIETLRFA 111
>UNIPROTKB|A7VJR9 [details] [associations]
symbol:Scx "Scleraxis" species:9796 "Equus caballus"
[GO:0001707 "mesoderm formation" evidence=ISS] [GO:0001894 "tissue
homeostasis" evidence=ISS] [GO:0001958 "endochondral ossification"
evidence=ISS] [GO:0002062 "chondrocyte differentiation"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0003188 "heart valve formation" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=ISS]
[GO:0030199 "collagen fibril organization" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0032967
"positive regulation of collagen biosynthetic process"
evidence=ISS] [GO:0035989 "tendon development" evidence=ISS]
[GO:0035990 "tendon cell differentiation" evidence=ISS] [GO:0035992
"tendon formation" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0060008 "Sertoli cell differentiation"
evidence=ISS] [GO:0061035 "regulation of cartilage development"
evidence=ISS] [GO:0061036 "positive regulation of cartilage
development" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0043066 GO:GO:0008284 GO:GO:0043565
GO:GO:0030199 GO:GO:0032967 GO:GO:0045944 GO:GO:0006351
GO:GO:0005667 GO:GO:0001894 GO:GO:0030509 GO:GO:0001707
GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0002062
GO:GO:0070888 GO:GO:0061036 GO:GO:0035993 GO:GO:0001958
GO:GO:0035990 GO:GO:0060008 GO:GO:2000543 CTD:20289
HOVERGEN:HBG036149 GO:GO:0003188 EMBL:AB254030
RefSeq:NP_001098620.1 UniGene:Eca.16116 ProteinModelPortal:A7VJR9
GeneID:100125857 KEGG:ecb:100125857 Uniprot:A7VJR9
Length = 200
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 70 GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLL 129
G P + R+ + R NARER R + +N A LR +IP P+ RKLSKI TL
Sbjct: 60 GGSGPGGRPGREPRQ-RHTANARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLR 116
Query: 130 LAKNYILMQANAL 142
LA +YI N L
Sbjct: 117 LASSYISHLGNVL 129
>FB|FBgn0010433 [details] [associations]
symbol:ato "atonal" species:7227 "Drosophila melanogaster"
[GO:0007460 "R8 cell fate commitment" evidence=NAS;IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0007399
"nervous system development" evidence=NAS;TAS] [GO:0045165 "cell
fate commitment" evidence=IMP] [GO:0001748 "optic lobe placode
development" evidence=IMP] [GO:0007423 "sensory organ development"
evidence=IMP;NAS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0016360 "sensory organ precursor cell fate
determination" evidence=IMP;IDA;TAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=IEP] [GO:0001745 "compound eye
morphogenesis" evidence=TAS] [GO:0007420 "brain development"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IGI] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IGI] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0045433 "male courtship behavior, veined
wing generated song production" evidence=IMP] [GO:0045464 "R8 cell
fate specification" evidence=NAS;TAS] [GO:0016330 "second mitotic
wave involved in compound eye morphogenesis" evidence=TAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0048800
"antennal morphogenesis" evidence=IMP] [GO:0007438 "oenocyte
development" evidence=IMP] [GO:0048801 "antennal joint
morphogenesis" evidence=IMP] [GO:0045465 "R8 cell differentiation"
evidence=TAS] [GO:0008038 "neuron recognition" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0048666 "neuron development"
evidence=IMP] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:AE014297 GO:GO:0005634 GO:GO:0007173
GO:GO:0007420 GO:GO:0003677 GO:GO:0045464 GO:GO:0045944
GO:GO:0007422 GO:GO:0000187 GO:GO:0007438 GO:GO:0048813
GO:GO:0006366 GO:GO:0007605 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG267878 GeneTree:ENSGT00680000099574 GO:GO:0016360
GO:GO:0007224 KO:K09083 EMBL:L36646 EMBL:AM294774 EMBL:AM294775
EMBL:AM294776 EMBL:AM294777 EMBL:AM294778 EMBL:AM294779
EMBL:AM294780 EMBL:AM294781 EMBL:AM294782 EMBL:AM294783
EMBL:AM294784 EMBL:AM294785 PIR:A40708 RefSeq:NP_731223.1
UniGene:Dm.5307 ProteinModelPortal:P48987 SMR:P48987 DIP:DIP-151N
IntAct:P48987 STRING:P48987 EnsemblMetazoa:FBtr0081828 GeneID:40975
KEGG:dme:Dmel_CG7508 UCSC:CG7508-RA CTD:40975 FlyBase:FBgn0010433
InParanoid:P48987 OMA:RSESPEY OrthoDB:EOG45X6C1 PhylomeDB:P48987
GenomeRNAi:40975 NextBio:821550 Bgee:P48987 GermOnline:CG7508
GO:GO:0048801 GO:GO:0001746 GO:GO:0045433 GO:GO:0008038
GO:GO:0001748 GO:GO:0016330 Uniprot:P48987
Length = 312
Score = 112 (44.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 72 LQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLA 131
+ P+ K+ R RL NARERRRM +LN A D LR +P + R+LSK TL +A
Sbjct: 248 ITPVVKRKR-----RLAANARERRRMQNLNQAFDRLRQYLPCLGND--RQLSKHETLQMA 300
Query: 132 KNYILMQANALEELRR 147
+ YI +AL +L R
Sbjct: 301 QTYI----SALGDLLR 312
>UNIPROTKB|G3MZY5 [details] [associations]
symbol:TAL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007610 "behavior" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007610 GO:GO:0009791 GO:GO:0030901 GO:GO:0035264
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021794
GeneTree:ENSGT00690000101643 KO:K09068 CTD:6887 OMA:HLPGLEN
EMBL:DAAA02024399 RefSeq:XP_002689947.1 RefSeq:XP_603087.3
Ensembl:ENSBTAT00000065685 GeneID:524755 KEGG:bta:524755
NextBio:20874032 Uniprot:G3MZY5
Length = 105
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 84 TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALE 143
T ++ N RER R ++N A +LR +IP H P +KLSK TL LA YI L
Sbjct: 2 TRKIFTNTRERWRQQNVNSAFAKLRKLIP-THPPD-KKLSKNETLRLAMRYINFLVKVLG 59
Query: 144 ELRRIITYIQAQGTM 158
E T + A G +
Sbjct: 60 EQSLQQTGVAAPGNI 74
>RGD|621455 [details] [associations]
symbol:Twist1 "twist basic helix-loop-helix transcription factor
1" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO]
[GO:0001503 "ossification" evidence=ISO] [GO:0001649 "osteoblast
differentiation" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0003180 "aortic valve morphogenesis" evidence=ISO] [GO:0003183
"mitral valve morphogenesis" evidence=ISO] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISO] [GO:0003253 "cardiac neural
crest cell migration involved in outflow tract morphogenesis"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=ISO] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0030500 "regulation of bone
mineralization" evidence=ISO] [GO:0032000 "positive regulation of
fatty acid beta-oxidation" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=ISO] [GO:0033128 "negative regulation of
histone phosphorylation" evidence=ISO] [GO:0035067 "negative
regulation of histone acetylation" evidence=ISO] [GO:0035115
"embryonic forelimb morphogenesis" evidence=ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035137
"hindlimb morphogenesis" evidence=ISO] [GO:0035359 "negative
regulation of peroxisome proliferator activated receptor signaling
pathway" evidence=ISO] [GO:0042476 "odontogenesis" evidence=IEP]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IDA;IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=ISO] [GO:0044092
"negative regulation of molecular function" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=ISO] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0048642 "negative regulation of
skeletal muscle tissue development" evidence=ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0060021 "palate development" evidence=IEP]
[GO:0060348 "bone development" evidence=IEP] [GO:0060363 "cranial
suture morphogenesis" evidence=ISO] [GO:0060900 "embryonic
camera-type eye formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061309 "cardiac
neural crest cell development involved in outflow tract
morphogenesis" evidence=ISO] [GO:0070888 "E-box binding"
evidence=ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071639 "positive regulation of monocyte
chemotactic protein-1 production" evidence=ISO] [GO:2000147
"positive regulation of cell motility" evidence=ISO] [GO:2000276
"negative regulation of oxidative phosphorylation uncoupler
activity" evidence=ISO] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=ISO]
[GO:2000773 "negative regulation of cellular senescence"
evidence=ISO] [GO:2000778 "positive regulation of interleukin-6
secretion" evidence=ISO] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISO] [GO:2000793 "cell
proliferation involved in heart valve development" evidence=ISO]
[GO:2000802 "positive regulation of endocardial cushion to
mesenchymal transition involved in heart valve formation"
evidence=ISO] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:621455 GO:GO:0005634 GO:GO:0006915 GO:GO:0001764
GO:GO:0043066 GO:GO:0071363 GO:GO:0001701 GO:GO:0045944
GO:GO:0071456 GO:GO:0032000 GO:GO:0000122 GO:GO:0043518
GO:GO:0000981 GO:GO:0032720 GO:GO:0030500 GO:GO:0003183
GO:GO:0071639 GO:GO:0001843 GO:GO:0043433 GO:GO:0035116
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:2000147
GO:GO:0035115 GO:GO:0060021 GO:GO:0042733 GO:GO:0042476
GO:GO:0060348 GO:GO:0048701 GO:GO:0061029 GO:GO:0045668
GO:GO:0070888 GO:GO:2000778 GO:GO:0032760 GO:GO:0035359
GO:GO:0050679 GO:GO:0003203 GO:GO:0060363 GO:GO:0035067
GO:GO:2000773 GO:GO:0048642 GO:GO:0003180 GO:GO:2000679
GO:GO:0014067 GO:GO:0003253 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 InterPro:IPR015789 PANTHER:PTHR23349:SF6
GO:GO:2000793 GO:GO:0033128 GO:GO:2000802 IPI:IPI00189140
UniGene:Rn.161904 EMBL:AF266260 ProteinModelPortal:Q9JI41
STRING:Q9JI41 UCSC:RGD:621455 InParanoid:Q9JI41 ArrayExpress:Q9JI41
Genevestigator:Q9JI41 Uniprot:Q9JI41
Length = 86
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQANALE 143
R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q +
Sbjct: 2 RVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVLQSD 58
Query: 144 EL 145
EL
Sbjct: 59 EL 60
>ZFIN|ZDB-GENE-100922-228 [details] [associations]
symbol:si:ch211-251p5.3 "si:ch211-251p5.3"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-100922-228
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
EMBL:CR626923 IPI:IPI00495940 RefSeq:XP_696212.3
Ensembl:ENSDART00000011858 GeneID:567817 KEGG:dre:567817
OMA:RNTANAR NextBio:20888864 Uniprot:E7F361
Length = 200
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 28/57 (49%), Positives = 33/57 (57%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R NARER R + +N A LR +IP P+ RKLSKI TL LA +YI N L
Sbjct: 79 RNTANARERERTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASSYISHLGNVL 133
>UNIPROTKB|P79782 [details] [associations]
symbol:TCF15 "Transcription factor 15" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0007275 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG036149 EMBL:U76665 EMBL:U72641
IPI:IPI00601841 RefSeq:NP_990277.1 UniGene:Gga.22945
ProteinModelPortal:P79782 PRIDE:P79782 GeneID:395788
KEGG:gga:395788 CTD:6939 KO:K09070 NextBio:20815856 Uniprot:P79782
Length = 183
Score = 107 (42.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI TL LA +YI AN L
Sbjct: 67 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRLASSYIAHLANVL 117
>ZFIN|ZDB-GENE-980605-20 [details] [associations]
symbol:par1 "paraxis" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-980605-20 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG036149 KO:K09070 EMBL:AJ006310 IPI:IPI00507600
RefSeq:NP_571047.1 UniGene:Dr.81253 ProteinModelPortal:Q9YHA3
GeneID:30159 KEGG:dre:30159 CTD:145624 InParanoid:Q9YHA3
NextBio:20806630 ArrayExpress:Q9YHA3 Uniprot:Q9YHA3
Length = 183
Score = 107 (42.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 32/72 (44%), Positives = 38/72 (52%)
Query: 75 LAKKNRQGKTV----RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLL 130
+++K G V R NARER R +N A LR +IP P RKLSKI TL L
Sbjct: 51 MSRKTTVGSVVIVKQRNAANARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRL 108
Query: 131 AKNYILMQANAL 142
A +YI AN L
Sbjct: 109 ASSYISHLANVL 120
>UNIPROTKB|Q7RTU7 [details] [associations]
symbol:SCXA "Basic helix-loop-helix transcription factor
scleraxis" species:9606 "Homo sapiens" [GO:0003179 "heart valve
morphogenesis" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0061036 "positive regulation of cartilage
development" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0001707 "mesoderm formation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0070888 "E-box binding" evidence=IDA] [GO:0003188 "heart valve
formation" evidence=ISS] [GO:0030199 "collagen fibril organization"
evidence=ISS] [GO:0061035 "regulation of cartilage development"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=ISS]
[GO:0001894 "tissue homeostasis" evidence=ISS] [GO:0060008 "Sertoli
cell differentiation" evidence=ISS] [GO:0001958 "endochondral
ossification" evidence=ISS] [GO:0002062 "chondrocyte
differentiation" evidence=ISS] [GO:0030509 "BMP signaling pathway"
evidence=ISS] [GO:0035989 "tendon development" evidence=ISS]
[GO:0035992 "tendon formation" evidence=ISS] [GO:0035993 "deltoid
tuberosity development" evidence=ISS] [GO:0035990 "tendon cell
differentiation" evidence=ISS] [GO:0043425 "bHLH transcription
factor binding" evidence=IPI] [GO:0032967 "positive regulation of
collagen biosynthetic process" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0045892
GO:GO:0043066 GO:GO:0071560 GO:GO:0008284 GO:GO:0043565
GO:GO:0030199 GO:GO:0032967 GO:GO:0045944 GO:GO:0006351
GO:GO:0005667 GO:GO:0001894 GO:GO:0030509 GO:GO:0071773
GO:GO:0001707 GO:GO:0046982 GO:GO:0071260 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0002062 GO:GO:0060325 GO:GO:0070888
GO:GO:0048706 GO:GO:0061036 GO:GO:0035993 GO:GO:0001958
GO:GO:0035990 GO:GO:0060008 GO:GO:2000543 EMBL:AC110280
GO:GO:0061056 HOVERGEN:HBG036149 EMBL:AC145291 EMBL:BK000280
IPI:IPI00394929 RefSeq:NP_001008272.1 RefSeq:NP_001073983.1
UniGene:Hs.553250 UniGene:Hs.723088 ProteinModelPortal:Q7RTU7
SMR:Q7RTU7 STRING:Q7RTU7 PhosphoSite:Q7RTU7 PRIDE:Q7RTU7
Ensembl:ENST00000340210 Ensembl:ENST00000340695 GeneID:100129885
GeneID:642658 KEGG:hsa:100129885 KEGG:hsa:642658 UCSC:uc003zbn.2
CTD:100129885 CTD:642658 GeneCards:GC08P145397
GeneCards:GC08P145490 HGNC:HGNC:24312 HGNC:HGNC:32322 HPA:HPA043183
MIM:609067 neXtProt:NX_Q7RTU7 PharmGKB:PA142670943 eggNOG:NOG288076
HOGENOM:HOG000231706 InParanoid:Q7RTU7 OMA:GSDEKPC
OrthoDB:EOG4ZPDWJ PhylomeDB:Q7RTU7 NextBio:20789216 Bgee:Q7RTU7
CleanEx:HS_SCXA Genevestigator:Q7RTU7 GO:GO:0003188 Uniprot:Q7RTU7
Length = 201
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 30/69 (43%), Positives = 38/69 (55%)
Query: 74 PLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKN 133
P + R+ + R NARER R + +N A LR +IP P+ RKLSKI TL LA +
Sbjct: 66 PGGRPGREPRQ-RHTANARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASS 122
Query: 134 YILMQANAL 142
YI N L
Sbjct: 123 YISHLGNVL 131
>UNIPROTKB|P59101 [details] [associations]
symbol:SCX "Basic helix-loop-helix transcription factor
scleraxis" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0061056 "sclerotome development" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0071773 "cellular response to BMP stimulus"
evidence=IEP] [GO:0035989 "tendon development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0044344 GO:GO:0003677
GO:GO:0006351 GO:GO:0071773 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0061056 EMBL:AF505881 IPI:IPI00602902 RefSeq:NP_989584.1
UniGene:Gga.49818 ProteinModelPortal:P59101 GeneID:374101
KEGG:gga:374101 CTD:20289 HOVERGEN:HBG036149 NextBio:20813620
GO:GO:0035989 Uniprot:P59101
Length = 187
Score = 107 (42.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/57 (49%), Positives = 33/57 (57%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
R NARER R + +N A LR +IP P+ RKLSKI TL LA +YI N L
Sbjct: 69 RHTANARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASSYISHLGNVL 123
>UNIPROTKB|F1SEI0 [details] [associations]
symbol:FERD3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0045892 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 OMA:HPLLCDF EMBL:CU928096
RefSeq:XP_003130241.1 Ensembl:ENSSSCT00000016746 GeneID:100516634
KEGG:ssc:100516634 Uniprot:F1SEI0
Length = 164
Score = 105 (42.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 47 DENCPEHLSHNSRFQDPT--HSGAMGSLQPLAKKNRQ-GKTVRLNINARERRRMHDLNDA 103
+E PE +D +G SL K+ R R N RER+RM +LN+A
Sbjct: 59 EEEDPEEEGEVEEGEDEEVEEAGRGASLLGRPKRKRVITYAQRQAANIRERKRMFNLNEA 118
Query: 104 LDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQANALEELRR 147
D+LR +P +A+ ++LS+I TL LA YI LE +
Sbjct: 119 FDQLRRKVPTFAYE---KRLSRIETLRLAIVYISFMTELLESFEK 160
>MGI|MGI:102934 [details] [associations]
symbol:Scx "scleraxis" species:10090 "Mus musculus"
[GO:0001707 "mesoderm formation" evidence=IMP] [GO:0001894 "tissue
homeostasis" evidence=IMP] [GO:0001958 "endochondral ossification"
evidence=IMP] [GO:0002062 "chondrocyte differentiation"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0010628 "positive regulation of gene expression"
evidence=IDA;IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0030199 "collagen fibril organization" evidence=IMP]
[GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0032967
"positive regulation of collagen biosynthetic process"
evidence=IDA;IMP] [GO:0035914 "skeletal muscle cell
differentiation" evidence=IMP] [GO:0035989 "tendon development"
evidence=IMP] [GO:0035990 "tendon cell differentiation"
evidence=IMP] [GO:0035992 "tendon formation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO;IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=NAS]
[GO:0061035 "regulation of cartilage development" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=IMP] [GO:0070888 "E-box binding" evidence=IDA] [GO:2000543
"positive regulation of gastrulation" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:102934 GO:GO:0045892 GO:GO:0043066 GO:GO:0071560
GO:GO:0008284 GO:GO:0043565 GO:GO:0030199 GO:GO:0032967
GO:GO:0045944 GO:GO:0006351 GO:GO:0005667 GO:GO:0001894
GO:GO:0030509 GO:GO:0071773 GO:GO:0001707 GO:GO:0071260
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0002062 GO:GO:0035914
GO:GO:0060325 GO:GO:0070888 GO:GO:0048706 GO:GO:0061036
GO:GO:0035993 GO:GO:0001958 GO:GO:0035990 GO:GO:0060008
GO:GO:2000543 GeneTree:ENSGT00690000101643 GO:GO:0061056 CTD:20289
HOVERGEN:HBG036149 eggNOG:NOG288076 HOGENOM:HOG000231706
OMA:GSDEKPC OrthoDB:EOG4ZPDWJ GO:GO:0003188 EMBL:S78079
IPI:IPI00381245 RefSeq:NP_942588.1 UniGene:Mm.322821
ProteinModelPortal:Q64124 SMR:Q64124 STRING:Q64124
PhosphoSite:Q64124 PRIDE:Q64124 Ensembl:ENSMUST00000043089
GeneID:20289 KEGG:mmu:20289 InParanoid:Q64124 NextBio:297999
Bgee:Q64124 CleanEx:MM_SCX Genevestigator:Q64124
GermOnline:ENSMUSG00000034161 Uniprot:Q64124
Length = 207
Score = 108 (43.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 30/69 (43%), Positives = 38/69 (55%)
Query: 74 PLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKN 133
P + R+ + R NARER R + +N A LR +IP P+ RKLSKI TL LA +
Sbjct: 69 PGGRPGREPRQ-RHTANARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASS 125
Query: 134 YILMQANAL 142
YI N L
Sbjct: 126 YISHLGNVL 134
>UNIPROTKB|J9NW99 [details] [associations]
symbol:ATOH8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] EMBL:AAEX03010932 EMBL:AAEX03010933 EMBL:AAEX03010934
Ensembl:ENSCAFT00000049305 GeneTree:ENSGT00440000034222
Gene3D:4.10.280.10 InterPro:IPR011598 Pfam:PF00010 SMART:SM00353
SUPFAM:SSF47459 PROSITE:PS50888 Uniprot:J9NW99
Length = 173
Score = 106 (42.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 81 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 135
>RGD|1588254 [details] [associations]
symbol:Scx "scleraxis" species:10116 "Rattus norvegicus"
[GO:0001707 "mesoderm formation" evidence=IEA;ISO] [GO:0001894
"tissue homeostasis" evidence=IEA;ISO] [GO:0001958 "endochondral
ossification" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=IEA;ISO] [GO:0003179 "heart valve
morphogenesis" evidence=ISO] [GO:0003188 "heart valve formation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA;ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030199 "collagen fibril
organization" evidence=IEA;ISO] [GO:0030509 "BMP signaling pathway"
evidence=IEA;ISO] [GO:0032967 "positive regulation of collagen
biosynthetic process" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0035989 "tendon
development" evidence=ISO] [GO:0035990 "tendon cell
differentiation" evidence=IEA;ISO] [GO:0035992 "tendon formation"
evidence=ISO] [GO:0035993 "deltoid tuberosity development"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0060325
"face morphogenesis" evidence=IEA] [GO:0061035 "regulation of
cartilage development" evidence=ISO] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA;ISO] [GO:0061056
"sclerotome development" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0071773
"cellular response to BMP stimulus" evidence=IEA] [GO:2000543
"positive regulation of gastrulation" evidence=IEA;ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:1588254 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH473950
GeneTree:ENSGT00690000101643 CTD:20289 OMA:GSDEKPC
RefSeq:NP_001123980.1 UniGene:Rn.198233 Ensembl:ENSRNOT00000029768
GeneID:680712 KEGG:rno:680712 NextBio:719338 Uniprot:G3V8X3
Length = 209
Score = 108 (43.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/69 (43%), Positives = 38/69 (55%)
Query: 74 PLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKN 133
P + R+ + R NARER R + +N A LR +IP P+ RKLSKI TL LA +
Sbjct: 69 PGGRPGREPRQ-RHTANARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASS 125
Query: 134 YILMQANAL 142
YI N L
Sbjct: 126 YISHLGNVL 134
>MGI|MGI:104664 [details] [associations]
symbol:Tcf15 "transcription factor 15" species:10090 "Mus
musculus" [GO:0001756 "somitogenesis" evidence=IMP] [GO:0003016
"respiratory system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0016265 "death" evidence=IMP] [GO:0036342
"post-anal tail morphogenesis" evidence=IMP] [GO:0042755 "eating
behavior" evidence=IMP] [GO:0043583 "ear development" evidence=IMP]
[GO:0043588 "skin development" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048339 "paraxial mesoderm
development" evidence=IMP] [GO:0048644 "muscle organ morphogenesis"
evidence=IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0050884 "neuromuscular process controlling
posture" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:104664 GO:GO:0005634
GO:GO:0043588 GO:GO:0006355 GO:GO:0048644 GO:GO:0003677
GO:GO:0042755 GO:GO:0006351 GO:GO:0001756 GO:GO:0003016
GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705
GO:GO:0036342 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 HOVERGEN:HBG036149
HOGENOM:HOG000231706 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
eggNOG:NOG246787 OMA:NQRKGGS EMBL:U18658 EMBL:BC027533 EMBL:U20164
IPI:IPI00222980 RefSeq:NP_033354.2 UniGene:Mm.3881
ProteinModelPortal:Q60756 SMR:Q60756 STRING:Q60756
PhosphoSite:Q60756 PaxDb:Q60756 PRIDE:Q60756
Ensembl:ENSMUST00000089112 GeneID:21407 KEGG:mmu:21407
InParanoid:Q60756 NextBio:300680 Bgee:Q60756 CleanEx:MM_TCF15
Genevestigator:Q60756 GermOnline:ENSMUSG00000068079 Uniprot:Q60756
Length = 195
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI TL LA +YI AN L
Sbjct: 76 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRLASSYIAHLANVL 126
>RGD|1308464 [details] [associations]
symbol:Tcf15 "transcription factor 15" species:10116 "Rattus
norvegicus" [GO:0001756 "somitogenesis" evidence=IEA;ISO]
[GO:0003016 "respiratory system process" evidence=IEA;ISO]
[GO:0007517 "muscle organ development" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016265 "death" evidence=IEA;ISO] [GO:0036342 "post-anal tail
morphogenesis" evidence=IEA;ISO] [GO:0042755 "eating behavior"
evidence=IEA;ISO] [GO:0043583 "ear development" evidence=IEA;ISO]
[GO:0043588 "skin development" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048339 "paraxial
mesoderm development" evidence=IEA;ISO] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA;ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:1308464
GO:GO:0043588 GO:GO:0048644 GO:GO:0042755 GO:GO:0001756
GO:GO:0003016 GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048705 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
OMA:NQRKGGS IPI:IPI00210990 RefSeq:NP_001162051.1 UniGene:Rn.222438
Ensembl:ENSRNOT00000000013 GeneID:296272 KEGG:rno:296272
UCSC:RGD:1308464 NextBio:640896 Uniprot:D3ZEK9
Length = 195
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI TL LA +YI AN L
Sbjct: 76 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRLASSYIAHLANVL 126
>UNIPROTKB|A2VE98 [details] [associations]
symbol:TCF15 "Transcription factor 15 (Basic
helix-loop-helix)" species:9913 "Bos taurus" [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0048705 "skeletal system morphogenesis" evidence=IEA]
[GO:0048644 "muscle organ morphogenesis" evidence=IEA] [GO:0048339
"paraxial mesoderm development" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0043583 "ear development"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0036342 "post-anal tail morphogenesis" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0003016 "respiratory system
process" evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0043588 GO:GO:0048644 GO:GO:0042755 GO:GO:0001756
GO:GO:0003016 GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048705 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 HOVERGEN:HBG036149
HOGENOM:HOG000231706 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
eggNOG:NOG246787 OMA:NQRKGGS EMBL:DAAA02036374 EMBL:BC133638
IPI:IPI00695822 RefSeq:NP_001075190.1 UniGene:Bt.63520
Ensembl:ENSBTAT00000007554 GeneID:518491 KEGG:bta:518491
InParanoid:A2VE98 NextBio:20872665 Uniprot:A2VE98
Length = 197
Score = 107 (42.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI TL LA +YI AN L
Sbjct: 76 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRLASSYIAHLANVL 126
>UNIPROTKB|F1S863 [details] [associations]
symbol:TCF15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048339 "paraxial mesoderm development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043583 "ear development" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0043588 GO:GO:0048644
GO:GO:0042755 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 GeneTree:ENSGT00690000101643 KO:K09070
OMA:NQRKGGS EMBL:CU606951 RefSeq:XP_003134406.1 UniGene:Ssc.45238
Ensembl:ENSSSCT00000007881 GeneID:100517249 KEGG:ssc:100517249
Uniprot:F1S863
Length = 197
Score = 107 (42.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI TL LA +YI AN L
Sbjct: 76 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRLASSYIAHLANVL 126
>UNIPROTKB|E2R7N0 [details] [associations]
symbol:MSC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060539 "diaphragm development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0060539
CTD:9242 KO:K09072 OMA:AGGCKRK GO:GO:0014707
GeneTree:ENSGT00690000101840 EMBL:AAEX03015863 RefSeq:XP_544121.2
ProteinModelPortal:E2R7N0 Ensembl:ENSCAFT00000012653 GeneID:486992
KEGG:cfa:486992 NextBio:20860680 Uniprot:E2R7N0
Length = 198
Score = 107 (42.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 37/106 (34%), Positives = 50/106 (47%)
Query: 59 RFQDPTHSGAMGSLQPLAKKNRQG--KTVRLNI-NARERRRMHDLNDALDELRAVIPYAH 115
R + P +G G +PL K K + N NARER RM L+ A L+ +P+
Sbjct: 71 RRKRPRVAGGGGGKKPLPPKGSAADCKQSQRNAANARERARMRVLSKAFSRLKTSLPWV- 129
Query: 116 SPSVRKLSKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
P KLSK+ TL LA +YI L+E R Y+ +T P
Sbjct: 130 -PPDTKLSKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVN-LTWP 173
>UNIPROTKB|Q90691 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:9421
HOVERGEN:HBG051880 KO:K09071 EMBL:U40041 IPI:IPI00578038
RefSeq:NP_990296.1 UniGene:Gga.478 ProteinModelPortal:Q90691
GeneID:395812 KEGG:gga:395812 NextBio:20815880 Uniprot:Q90691
Length = 202
Score = 107 (42.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 66 SGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKI 125
SG G L+ L+ R G+ + +ERRR +N A ELR IP + P+ KLSKI
Sbjct: 67 SGGAGRLEALS--GRLGRRKGVGGPKKERRRTESINSAFAELRECIP--NVPADTKLSKI 122
Query: 126 ATLLLAKNYI--LMQANA 141
TL LA +YI LM+ A
Sbjct: 123 KTLRLATSYIAYLMEVLA 140
>UNIPROTKB|E2RI49 [details] [associations]
symbol:TCF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048339 "paraxial mesoderm development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043583 "ear development" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0043588 GO:GO:0048644
GO:GO:0042755 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 GeneTree:ENSGT00690000101643 CTD:6939
KO:K09070 OMA:NQRKGGS EMBL:AAEX03013859 RefSeq:XP_852061.1
Ensembl:ENSCAFT00000011122 GeneID:609667 KEGG:cfa:609667
NextBio:20895256 Uniprot:E2RI49
Length = 202
Score = 107 (42.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI TL LA +YI AN L
Sbjct: 81 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETLRLASSYIAHLANVL 131
>UNIPROTKB|F1SEI1 [details] [associations]
symbol:TWIST1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000802 "positive regulation of endocardial cushion to
mesenchymal transition involved in heart valve formation"
evidence=IEA] [GO:2000793 "cell proliferation involved in heart
valve development" evidence=IEA] [GO:2000780 "negative regulation
of double-strand break repair" evidence=IEA] [GO:2000778 "positive
regulation of interleukin-6 secretion" evidence=IEA] [GO:2000773
"negative regulation of cellular senescence" evidence=IEA]
[GO:2000679 "positive regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:2000276 "negative regulation of
oxidative phosphorylation uncoupler activity" evidence=IEA]
[GO:2000147 "positive regulation of cell motility" evidence=IEA]
[GO:0071639 "positive regulation of monocyte chemotactic protein-1
production" evidence=IEA] [GO:0071456 "cellular response to
hypoxia" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0060900 "embryonic camera-type eye formation" evidence=IEA]
[GO:0060363 "cranial suture morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0048642 "negative regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0043518 "negative regulation of
DNA damage response, signal transduction by p53 class mediator"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0035359 "negative regulation of peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0033128 "negative regulation of histone phosphorylation"
evidence=IEA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=IEA] [GO:0032000
"positive regulation of fatty acid beta-oxidation" evidence=IEA]
[GO:0030500 "regulation of bone mineralization" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=IEA] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA] [GO:0003183 "mitral valve
morphogenesis" evidence=IEA] [GO:0003180 "aortic valve
morphogenesis" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006915 GO:GO:0001764 GO:GO:0001701
GO:GO:0045944 GO:GO:0071456 GO:GO:0032000 GO:GO:0000122
GO:GO:0043518 GO:GO:0000981 GO:GO:0032720 GO:GO:0030500
GO:GO:0003183 GO:GO:0071639 GO:GO:0001843 GO:GO:0043433
GO:GO:0035116 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649
GO:GO:2000147 GO:GO:0035115 GO:GO:0042733 GO:GO:0048701
GO:GO:0061029 GO:GO:0045668 GO:GO:0070888 GO:GO:2000778
GO:GO:0032760 GO:GO:0035359 GO:GO:0003203 GO:GO:0060363
GO:GO:0035067 GO:GO:2000773 GO:GO:0048642 GO:GO:0003180
GO:GO:2000679 GO:GO:0014067 GO:GO:0003253
GeneTree:ENSGT00690000101840 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 InterPro:IPR015789 PANTHER:PTHR23349:SF6
GO:GO:2000793 GO:GO:0033128 GO:GO:2000802 EMBL:CU928096
Ensembl:ENSSSCT00000016745 Uniprot:F1SEI1
Length = 150
Score = 102 (41.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 46 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVL 102
Query: 141 ALEEL 145
+EL
Sbjct: 103 QSDEL 107
>UNIPROTKB|F1NX36 [details] [associations]
symbol:F1NX36 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 EMBL:AADN02016072 EMBL:AADN02016071
IPI:IPI01017217 Ensembl:ENSGALT00000016933 Uniprot:F1NX36
Length = 166
Score = 104 (41.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NA+++RRMH LN A D+LR VIP ++ +KLSK TL +A+ YI A L
Sbjct: 3 NAQKQRRMHVLNHAFDQLRNVIPSFNND--KKLSKYETLQMAQIYISALAELL 53
>UNIPROTKB|F1Q2G0 [details] [associations]
symbol:ATOH8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00440000034222 EMBL:AAEX03010932 EMBL:AAEX03010933
EMBL:AAEX03010934 Ensembl:ENSCAFT00000012245 Uniprot:F1Q2G0
Length = 194
Score = 106 (42.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 103 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 157
>ZFIN|ZDB-GENE-060503-414 [details] [associations]
symbol:scxa "scleraxis homolog A (mouse)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-060503-414
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
EMBL:BX255894 IPI:IPI00633306 Ensembl:ENSDART00000105192
Bgee:F1Q9G7 Uniprot:F1Q9G7
Length = 204
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R + +N A LR +IP P+ RKLSKI TL LA +YI N L
Sbjct: 90 NARERDRTNSVNTAFTALRTLIPT--EPADRKLSKIETLRLASSYISHLGNVL 140
>ZFIN|ZDB-GENE-000511-1 [details] [associations]
symbol:hand2 "heart and neural crest derivatives
expressed transcript 2" species:7955 "Danio rerio" [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003144
"embryonic heart tube formation" evidence=IMP] [GO:0003142
"cardiogenic plate morphogenesis" evidence=IMP] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IMP] [GO:0035051
"cardiocyte differentiation" evidence=IMP] [GO:0030859 "polarized
epithelial cell differentiation" evidence=IMP] [GO:0003007 "heart
morphogenesis" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] [GO:0003342 "proepicardium development" evidence=IMP]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0071908
"determination of intestine left/right asymmetry" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010002 "cardioblast differentiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-000511-1 GO:GO:0010002 GO:GO:0060047
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0035118 GO:GO:0048703
GO:GO:0030878 HOVERGEN:HBG051880 KO:K09071 GO:GO:0003144 CTD:9464
GO:GO:0003342 GO:GO:0030859 GO:GO:0003142 EMBL:BC083365
IPI:IPI00613094 RefSeq:NP_571701.2 UniGene:Dr.81423
ProteinModelPortal:Q5XJD8 STRING:Q5XJD8 DNASU:58150 GeneID:58150
KEGG:dre:58150 InParanoid:Q5XJD8 NextBio:20892399
ArrayExpress:Q5XJD8 GO:GO:0071908 Uniprot:Q5XJD8
Length = 208
Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 51 PEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAV 110
PE+ S + D +H G + + R K R N +ERRR +N A ELR
Sbjct: 59 PEY-STGAPGLDHSHYGGVPGAGAVGMGPRTVKR-RPTANRKERRRTQSINSAFAELREC 116
Query: 111 IPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
IP + P+ KLSKI TL LA +YI + L++
Sbjct: 117 IP--NVPADTKLSKIKTLRLATSYIAYLMDILDK 148
>ZFIN|ZDB-GENE-051113-88 [details] [associations]
symbol:tcf21 "transcription factor 21" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI;IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:0007530 "sex determination" evidence=ISS] [GO:0060541
"respiratory system development" evidence=ISS] [GO:0048536 "spleen
development" evidence=ISS] [GO:0048732 "gland development"
evidence=ISS] [GO:0072162 "metanephric mesenchymal cell
differentiation" evidence=ISS] [GO:0072277 "metanephric glomerular
capillary formation" evidence=ISS] [GO:0030855 "epithelial cell
differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060425 "lung morphogenesis"
evidence=ISS] [GO:0060435 "bronchiole development" evidence=ISS]
[GO:0060539 "diaphragm development" evidence=ISS] [GO:0060766
"negative regulation of androgen receptor signaling pathway"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=ISS] [GO:0070888 "E-box binding" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0014707 "branchiomeric skeletal muscle
development" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0060021 "palate development" evidence=ISS] [GO:0060426 "lung
vasculature development" evidence=ISS] [GO:0048286 "lung alveolus
development" evidence=ISS] [GO:0048608 "reproductive structure
development" evidence=ISS] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-051113-88 GO:GO:0005634 GO:GO:0001078 GO:GO:0046983
GO:GO:0001077 GO:GO:0048286 GO:GO:0048536 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0001658 GO:GO:0060539
GO:GO:0070888 GO:GO:0030855 GO:GO:0060008 GO:GO:0007530
GO:GO:0060766 GO:GO:0060426 GO:GO:0048557 GO:GO:0060425
GO:GO:0048732 GO:GO:0060435 HOGENOM:HOG000261670 GO:GO:0014707
GO:GO:0072162 GO:GO:0072277 CTD:6943 eggNOG:NOG235686
OrthoDB:EOG4BZN40 EMBL:EF632300 EMBL:BC107968 IPI:IPI00509972
RefSeq:NP_001032770.1 UniGene:Dr.91652 ProteinModelPortal:Q32PV5
STRING:Q32PV5 GeneID:558148 KEGG:dre:558148 InParanoid:Q32PV5
NextBio:20882339 Uniprot:Q32PV5
Length = 176
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 80 RQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
++GK V+ N NARER RM L+ A L+ +P+ P KLSK+ TL LA +YI
Sbjct: 71 QEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV--PPDTKLSKLDTLRLASSYI 125
>UNIPROTKB|Q96RJ6 [details] [associations]
symbol:FERD3L "Fer3-like protein" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
EMBL:CH471073 GO:GO:0006351 EMBL:CH236948 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF369897 EMBL:AF517122 EMBL:BC069147
EMBL:BC101135 EMBL:BC101136 EMBL:BC101137 EMBL:BC101138
IPI:IPI00658037 RefSeq:NP_690862.1 UniGene:Hs.592168
ProteinModelPortal:Q96RJ6 SMR:Q96RJ6 STRING:Q96RJ6
PhosphoSite:Q96RJ6 DMDM:74752106 PRIDE:Q96RJ6
Ensembl:ENST00000275461 GeneID:222894 KEGG:hsa:222894
UCSC:uc003suo.1 CTD:222894 GeneCards:GC07M019150 HGNC:HGNC:16660
HPA:HPA043494 neXtProt:NX_Q96RJ6 PharmGKB:PA134973730
eggNOG:NOG273146 HOGENOM:HOG000046685 HOVERGEN:HBG094853
InParanoid:Q96RJ6 OMA:HPLLCDF OrthoDB:EOG4VQ9QX PhylomeDB:Q96RJ6
GenomeRNAi:222894 NextBio:91680 CleanEx:HS_FERD3L
Genevestigator:Q96RJ6 Uniprot:Q96RJ6
Length = 166
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 90 NARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQANALEELRR 147
N RER+RM +LN+A D+LR +P +A+ ++LS+I TL LA YI LE +
Sbjct: 107 NIRERKRMFNLNEAFDQLRRKVPTFAYE---KRLSRIETLRLAIVYISFMTELLESCEK 162
>ZFIN|ZDB-GENE-000210-6 [details] [associations]
symbol:twist1a "twist1a" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-000210-6 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P01106 GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J EMBL:CU627989 EMBL:AF205259
EMBL:BC076428 EMBL:DQ191169 EMBL:DQ351987 EMBL:BK006285
IPI:IPI00490198 RefSeq:NP_571059.1 UniGene:Dr.79620 STRING:Q9PTE3
Ensembl:ENSDART00000043595 GeneID:30175 KEGG:dre:30175 CTD:30175
InParanoid:Q9PTE3 NextBio:20806643 Uniprot:Q9PTE3
Length = 171
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 76 QTQRVMANVRERQRTQSLNEAFASLRKIIPTL--PS-DKLSKIQTLKLAARYIDFLCQVL 132
Query: 141 ALEEL 145
+EL
Sbjct: 133 QSDEL 137
>UNIPROTKB|F1RJ02 [details] [associations]
symbol:HAND2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000764 "positive regulation of semaphorin-plexin
signaling pathway involved in outflow tract morphogenesis"
evidence=IEA] [GO:2000763 "positive regulation of transcription
from RNA polymerase II promoter involved in norepinephrine
biosynthetic process" evidence=IEA] [GO:2000679 "positive
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0061325
"cell proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061032 "visceral serous pericardium development"
evidence=IEA] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043392 "negative regulation of
DNA binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0010667 "negative regulation of cardiac
muscle cell apoptotic process" evidence=IEA] [GO:0010463
"mesenchymal cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003680 "AT DNA binding" evidence=IEA]
[GO:0003266 "regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0001967 "suckling behavior" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0006915 GO:GO:0001701 GO:GO:0001967
GO:GO:0005667 GO:GO:0001077 GO:GO:0000790 GO:GO:0007512
GO:GO:0042475 GO:GO:0048538 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0060021 GO:GO:0042733
GO:GO:0048485 GO:GO:0000977 GO:GO:0045668 GO:GO:0070888
GO:GO:0003680 GO:GO:0048935 GO:GO:0043392 GO:GO:0060536
GO:GO:0003266 GO:GO:0060982 GO:GO:0061032 GO:GO:0043586
GO:GO:0010463 GO:GO:2000679 GeneTree:ENSGT00690000101643
GO:GO:0003219 OMA:ATRCGHE GO:GO:0003253 GO:GO:0061325 GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:CU468996
Ensembl:ENSSSCT00000010638 Uniprot:F1RJ02
Length = 176
Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 25 PEYASGAASL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 82
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 83 ECIP--NVPADTKLSKIKTLRLATSYI 107
>UNIPROTKB|P13903 [details] [associations]
symbol:twist1 "Twist-related protein" species:8355 "Xenopus
laevis" [GO:0014029 "neural crest formation" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014029 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 KO:K09069 EMBL:M27730
EMBL:BC123238 PIR:A33637 RefSeq:NP_001079352.1 UniGene:Xl.879
ProteinModelPortal:P13903 GeneID:378698 KEGG:xla:378698 CTD:378698
Xenbase:XB-GENE-865309 Uniprot:P13903
Length = 166
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQANALE 143
R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q +
Sbjct: 74 RVMANVRERQRTQSLNEAFSSLRKIIPTL--PS-DKLSKIQTLKLASRYIDFLCQVLQSD 130
Query: 144 EL 145
EL
Sbjct: 131 EL 132
>UNIPROTKB|Q90690 [details] [associations]
symbol:HAND2 "Heart- and neural crest derivatives-expressed
protein 2" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG259520
HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071 EMBL:U40040
IPI:IPI00603751 RefSeq:NP_990297.1 UniGene:Gga.479
ProteinModelPortal:Q90690 STRING:Q90690 GeneID:395813
KEGG:gga:395813 CTD:9464 NextBio:20815881 Uniprot:Q90690
Length = 216
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 35/87 (40%), Positives = 46/87 (52%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ ++ + D +H G + GS P R K R N +ERRR +N A ELR
Sbjct: 65 PEY-ANGAPGMDHSHYGGVPPGSGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 122
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 123 ECIP--NVPADTKLSKIKTLRLATSYI 147
>UNIPROTKB|E2R686 [details] [associations]
symbol:FERD3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045892 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 CTD:222894 OMA:HPLLCDF
EMBL:AAEX03009354 RefSeq:XP_539457.2 Ensembl:ENSCAFT00000003953
GeneID:482340 KEGG:cfa:482340 NextBio:20856958 Uniprot:E2R686
Length = 167
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 90 NARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQANALE 143
N RER+RM +LN+A D+LR +P +A+ ++LS+I TL LA YI LE
Sbjct: 108 NIRERKRMFNLNEAFDQLRRKVPTFAYE---KRLSRIETLRLAIVYISFMTELLE 159
>ZFIN|ZDB-GENE-050417-357 [details] [associations]
symbol:twist1b "twist1b" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0030500 "regulation of bone mineralization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-050417-357 GO:GO:0030500 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009953 GeneTree:ENSGT00690000101840
HOVERGEN:HBG019071 InterPro:IPR015789 PANTHER:PTHR23349:SF6
eggNOG:NOG258515 KO:K09069 HOGENOM:HOG000261629 OrthoDB:EOG434W7J
EMBL:CU855688 EMBL:BC092796 EMBL:EF620930 IPI:IPI00835208
IPI:IPI00932045 RefSeq:NP_001017820.1 RefSeq:XP_003200219.1
UniGene:Dr.90894 Ensembl:ENSDART00000052927 GeneID:100535497
GeneID:550518 KEGG:dre:100535497 KEGG:dre:550518 CTD:550518
InParanoid:Q568M7 OMA:RSSKKNG NextBio:20879760 Uniprot:Q568M7
Length = 169
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 74 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLCQVL 130
Query: 141 ALEEL 145
+EL
Sbjct: 131 QSDEL 135
>UNIPROTKB|Q12870 [details] [associations]
symbol:TCF15 "Transcription factor 15" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0036342
"post-anal tail morphogenesis" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0043583 "ear development" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0048339 "paraxial
mesoderm development" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007498 "mesoderm development" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0043588 GO:GO:0007498 GO:GO:0048644
GO:GO:0003677 GO:GO:0042755 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 HOVERGEN:HBG036149 OrthoDB:EOG4ZPDWJ
CTD:6939 KO:K09070 EMBL:U08336 EMBL:AL133231 IPI:IPI00010762
PIR:A57717 RefSeq:NP_004600.2 UniGene:Hs.437
ProteinModelPortal:Q12870 SMR:Q12870 STRING:Q12870
PhosphoSite:Q12870 DMDM:116242817 PRIDE:Q12870 DNASU:6939
Ensembl:ENST00000246080 GeneID:6939 KEGG:hsa:6939
GeneCards:GC20M000532 HGNC:HGNC:11627 HPA:HPA046827 MIM:601010
neXtProt:NX_Q12870 PharmGKB:PA36382 eggNOG:NOG246787
InParanoid:Q12870 OMA:NQRKGGS PhylomeDB:Q12870 GenomeRNAi:6939
NextBio:27157 ArrayExpress:Q12870 Bgee:Q12870 CleanEx:HS_TCF15
Genevestigator:Q12870 GermOnline:ENSG00000125878 Uniprot:Q12870
Length = 199
Score = 104 (41.7 bits), Expect = 0.00021, P = 0.00021
Identities = 27/53 (50%), Positives = 31/53 (58%)
Query: 90 NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANAL 142
NARER R +N A LR +IP P RKLSKI T+ LA +YI AN L
Sbjct: 78 NARERDRTQSVNTAFTALRTLIPT--EPVDRKLSKIETVRLASSYIAHLANVL 128
>UNIPROTKB|E1BUA4 [details] [associations]
symbol:MSC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0060539 "diaphragm development"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
CTD:9242 KO:K09072 OMA:AGGCKRK GeneTree:ENSGT00690000101840
EMBL:AADN02038042 IPI:IPI00578965 RefSeq:XP_418293.3
Ensembl:ENSGALT00000030884 GeneID:420179 KEGG:gga:420179
Uniprot:E1BUA4
Length = 201
Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
Identities = 35/99 (35%), Positives = 47/99 (47%)
Query: 66 SGAMGSLQPLAKKN--RQGKTVRLNI-NARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
SG G P + +GK + N NARER RM L+ A L+ +P+ P KL
Sbjct: 81 SGPGGKKAPSGPRGPAAEGKQSQRNAANARERARMRVLSKAFSRLKTSLPWV--PPDTKL 138
Query: 123 SKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
SK+ TL LA +YI L+E R Y+ +T P
Sbjct: 139 SKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVN-LTWP 176
>ZFIN|ZDB-GENE-061215-7 [details] [associations]
symbol:atoh8 "atonal homolog 8" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=IMP] [GO:0061074 "regulation of neural retina development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-061215-7 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:84913 KO:K09084 GeneTree:ENSGT00440000034222
GO:GO:2001014 EMBL:BX957231 EMBL:EU272033 IPI:IPI00829175
RefSeq:NP_001073460.2 UniGene:Dr.22150 Ensembl:ENSDART00000054689
GeneID:561606 KEGG:dre:561606 HOGENOM:HOG000203136 NextBio:20884005
GO:GO:0061074 Uniprot:D2CLZ9
Length = 266
Score = 106 (42.4 bits), Expect = 0.00022, P = 0.00022
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 174 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 228
>UNIPROTKB|Q7RTS3 [details] [associations]
symbol:PTF1A "Pancreas transcription factor 1 subunit
alpha" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IEA]
[GO:0009888 "tissue development" evidence=IDA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0031017 "exocrine
pancreas development" evidence=ISS] [GO:0031018 "endocrine pancreas
development" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005737 Reactome:REACT_111045
GO:GO:0006355 GO:GO:0003677 GO:GO:0043565 GO:GO:0005667
GO:GO:0001077 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0030902 GO:GO:0031018 GO:GO:0048384 GO:GO:0048663
GO:GO:0031017 GO:GO:0009888 GO:GO:0060042 EMBL:AL139281 CTD:256297
eggNOG:NOG288112 HOGENOM:HOG000231913 HOVERGEN:HBG082224 KO:K09073
OMA:HQLHEYC OrthoDB:EOG4RXZ16 EMBL:AF181999 EMBL:BK000272
IPI:IPI00160766 RefSeq:NP_835455.1 UniGene:Hs.351503
ProteinModelPortal:Q7RTS3 SMR:Q7RTS3 STRING:Q7RTS3
PhosphoSite:Q7RTS3 DMDM:74749931 PaxDb:Q7RTS3 PRIDE:Q7RTS3
DNASU:256297 Ensembl:ENST00000376504 GeneID:256297 KEGG:hsa:256297
UCSC:uc001irp.3 GeneCards:GC10P023521 HGNC:HGNC:23734 HPA:CAB022612
MIM:607194 MIM:609069 neXtProt:NX_Q7RTS3 Orphanet:65288
PharmGKB:PA134864129 InParanoid:Q7RTS3 PhylomeDB:Q7RTS3
GenomeRNAi:256297 NextBio:92768 Bgee:Q7RTS3 CleanEx:HS_PTF1A
Genevestigator:Q7RTS3 Uniprot:Q7RTS3
Length = 328
Score = 107 (42.7 bits), Expect = 0.00022, P = 0.00022
Identities = 33/85 (38%), Positives = 46/85 (54%)
Query: 67 GAMGSLQPLAKKNRQGKT------VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVR 120
G G+ A++ R+ ++ +R N RERRRM +NDA + LR+ IP P +
Sbjct: 140 GLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEK 197
Query: 121 KLSKIATLLLAKNYILMQANALEEL 145
+LSK+ TL LA YI N L EL
Sbjct: 198 RLSKVDTLRLAIGYI----NFLSEL 218
>UNIPROTKB|F1MLT3 [details] [associations]
symbol:LOC781874 "Uncharacterized protein" species:9913
"Bos taurus" [GO:2000764 "positive regulation of semaphorin-plexin
signaling pathway involved in outflow tract morphogenesis"
evidence=IEA] [GO:2000763 "positive regulation of transcription
from RNA polymerase II promoter involved in norepinephrine
biosynthetic process" evidence=IEA] [GO:2000679 "positive
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0061325
"cell proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061032 "visceral serous pericardium development"
evidence=IEA] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043392 "negative regulation of
DNA binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0010667 "negative regulation of cardiac
muscle cell apoptotic process" evidence=IEA] [GO:0010463
"mesenchymal cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003680 "AT DNA binding" evidence=IEA]
[GO:0003266 "regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0001967 "suckling behavior" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0006915 GO:GO:0001701 GO:GO:0001967
GO:GO:0005667 GO:GO:0001077 GO:GO:0000790 GO:GO:0007512
GO:GO:0042475 GO:GO:0048538 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0060021 GO:GO:0042733
GO:GO:0048485 GO:GO:0000977 GO:GO:0045668 GO:GO:0070888
GO:GO:0003680 GO:GO:0048935 GO:GO:0043392 GO:GO:0060536
GO:GO:0003266 GO:GO:0060982 GO:GO:0061032 GO:GO:0043586
GO:GO:0010463 GO:GO:2000679 GeneTree:ENSGT00690000101643 KO:K09071
GO:GO:0003219 OMA:ATRCGHE GO:GO:0003253 GO:GO:0061325 GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:DAAA02021871 IPI:IPI00923949
RefSeq:XP_003586406.1 Ensembl:ENSBTAT00000061276 GeneID:781874
KEGG:bta:781874 Uniprot:F1MLT3
Length = 191
Score = 103 (41.3 bits), Expect = 0.00025, P = 0.00025
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 40 PEYASGAASL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 97
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 98 ECIP--NVPADTKLSKIKTLRLATSYI 122
>RGD|1311812 [details] [associations]
symbol:Ferd3l "Fer3-like (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1311812 GO:GO:0005634 GO:GO:0045892
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
EMBL:CH473947 CTD:222894 OMA:HPLLCDF OrthoDB:EOG4VQ9QX
IPI:IPI00213237 RefSeq:NP_001102450.1 UniGene:Rn.218515
Ensembl:ENSRNOT00000014731 GeneID:366598 KEGG:rno:366598
UCSC:RGD:1311812 NextBio:689703 Uniprot:D4A114
Length = 166
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 67 GAMGSLQPLAKKNRQ-GKTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSK 124
G + SL K+ R R N RER+RM +LN+A D+LR +P +A+ ++LS+
Sbjct: 83 GRVASLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYE---KRLSR 139
Query: 125 IATLLLAKNYILMQANALE 143
I TL LA YI L+
Sbjct: 140 IETLRLAIVYISFMTELLQ 158
>MGI|MGI:2150010 [details] [associations]
symbol:Ferd3l "Fer3-like (Drosophila)" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:2150010
GO:GO:0005634 GO:GO:0045892 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
CTD:222894 eggNOG:NOG273146 HOGENOM:HOG000046685 HOVERGEN:HBG094853
OMA:HPLLCDF OrthoDB:EOG4VQ9QX EMBL:AF369896 EMBL:AF517121
EMBL:BC111576 IPI:IPI00124894 RefSeq:NP_277057.1 UniGene:Mm.204643
ProteinModelPortal:Q923Z4 SMR:Q923Z4 STRING:Q923Z4
PhosphoSite:Q923Z4 PRIDE:Q923Z4 Ensembl:ENSMUST00000061035
GeneID:114712 KEGG:mmu:114712 UCSC:uc007niv.1 InParanoid:Q923Z4
NextBio:368725 Bgee:Q923Z4 Genevestigator:Q923Z4 Uniprot:Q923Z4
Length = 168
Score = 101 (40.6 bits), Expect = 0.00029, P = 0.00029
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 67 GAMGSLQPLAKKNRQ-GKTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSK 124
G + SL K+ R R N RER+RM +LN+A D+LR +P +A+ ++LS+
Sbjct: 85 GRVASLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYE---KRLSR 141
Query: 125 IATLLLAKNYILMQANALE 143
I TL LA YI L+
Sbjct: 142 IETLRLAIVYISFMTELLQ 160
>UNIPROTKB|Q9YH69 [details] [associations]
symbol:cdermo-1 "Dermo protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001076 "RNA polymerase
II transcription factor binding transcription factor activity"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA] [GO:0043392 "negative regulation
of DNA binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0061303 "cornea
development in camera-type eye" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
GO:GO:0008285 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0045668 GO:GO:0001076 HSSP:P01106 GO:GO:0045638 GO:GO:0043392
GO:GO:0010838 GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 OMA:DNKMSSC
EMBL:AADN02034437 EMBL:AADN02034438 EMBL:AJ131110 EMBL:BK006264
IPI:IPI00600994 RefSeq:NP_990010.1 UniGene:Gga.218 STRING:Q9YH69
Ensembl:ENSGALT00000006798 GeneID:395405 KEGG:gga:395405
InParanoid:Q9YH69 NextBio:20815489 Uniprot:Q9YH69
Length = 160
Score = 100 (40.3 bits), Expect = 0.00030, P = 0.00030
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 62 DPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRK 121
+P G S P ++ + ++ R+ N RER+R LN+A LR +IP PS K
Sbjct: 46 NPGKRGKKSS--PSSQSYEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL--PS-DK 100
Query: 122 LSKIATLLLAKNYI 135
LSKI TL LA YI
Sbjct: 101 LSKIQTLKLAARYI 114
>ZFIN|ZDB-GENE-030616-579 [details] [associations]
symbol:ptf1a "pancreas specific transcription
factor, 1a" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0031016 "pancreas
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0009790
"embryo development" evidence=ISS] [GO:0030902 "hindbrain
development" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;ISS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009888 "tissue development" evidence=ISS]
[GO:0031017 "exocrine pancreas development" evidence=ISS;IMP]
[GO:0048699 "generation of neurons" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IGI;IPI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-030616-579 GO:GO:0005737 GO:GO:0045893 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0009790
GO:GO:0009887 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030902
GO:GO:0048384 GeneTree:ENSGT00680000099574 GO:GO:0048699
GO:GO:0031017 GO:GO:0009888 EMBL:AL845362 EMBL:AY245546
EMBL:BC093269 IPI:IPI00491445 RefSeq:NP_997524.1 UniGene:Dr.86563
ProteinModelPortal:Q7ZSX3 STRING:Q7ZSX3 Ensembl:ENSDART00000021987
GeneID:368662 KEGG:dre:368662 CTD:256297 eggNOG:NOG288112
HOGENOM:HOG000231913 HOVERGEN:HBG082224 InParanoid:Q7ZSX3 KO:K09073
OMA:HQLHEYC OrthoDB:EOG4RXZ16 NextBio:20813099 Bgee:Q7ZSX3
Uniprot:Q7ZSX3
Length = 265
Score = 105 (42.0 bits), Expect = 0.00030, P = 0.00030
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 63 PTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
P G + + + + + +R N RERRRM +NDA + LR+ IP P ++L
Sbjct: 94 PHRDGGLLKRRRRMRSEVEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEKRL 151
Query: 123 SKIATLLLAKNYILMQANALE 143
SK+ TL LA YI A ++
Sbjct: 152 SKVDTLRLAIGYINFLAELVQ 172
>UNIPROTKB|F1SVB9 [details] [associations]
symbol:ATOH8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:ETQPFRE
GeneTree:ENSGT00440000034222 EMBL:CU928286
Ensembl:ENSSSCT00000009013 Uniprot:F1SVB9
Length = 315
Score = 106 (42.4 bits), Expect = 0.00031, P = 0.00031
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 223 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 277
>UNIPROTKB|F1MPZ6 [details] [associations]
symbol:ATOH8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:84913 KO:K09084 OMA:ETQPFRE
GeneTree:ENSGT00440000034222 EMBL:DAAA02031125 EMBL:DAAA02031126
IPI:IPI00710857 RefSeq:NP_001180033.1 UniGene:Bt.37772
Ensembl:ENSBTAT00000033053 GeneID:616225 KEGG:bta:616225
NextBio:20900027 Uniprot:F1MPZ6
Length = 317
Score = 106 (42.4 bits), Expect = 0.00031, P = 0.00031
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 225 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 279
>UNIPROTKB|Q96SQ7 [details] [associations]
symbol:ATOH8 "Protein atonal homolog 8" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF529205 EMBL:AK027614 EMBL:AK074681 EMBL:AC012454
EMBL:BC021207 EMBL:BC094832 EMBL:AL831857 IPI:IPI00045865
IPI:IPI00470409 RefSeq:NP_116216.2 UniGene:Hs.135569
ProteinModelPortal:Q96SQ7 SMR:Q96SQ7 IntAct:Q96SQ7 STRING:Q96SQ7
DMDM:224471820 PRIDE:Q96SQ7 Ensembl:ENST00000306279 GeneID:84913
KEGG:hsa:84913 UCSC:uc002sqm.4 UCSC:uc002sqn.3 CTD:84913
GeneCards:GC02P085978 HGNC:HGNC:24126 neXtProt:NX_Q96SQ7
PharmGKB:PA134904746 eggNOG:NOG311369 HOGENOM:HOG000034181
HOVERGEN:HBG095605 KO:K09084 OMA:ETQPFRE OrthoDB:EOG4H9XN2
PhylomeDB:Q96SQ7 GenomeRNAi:84913 NextBio:75304 ArrayExpress:Q96SQ7
Bgee:Q96SQ7 CleanEx:HS_ATOH8 Genevestigator:Q96SQ7 Uniprot:Q96SQ7
Length = 321
Score = 106 (42.4 bits), Expect = 0.00032, P = 0.00032
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 229 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 283
>MGI|MGI:1918343 [details] [associations]
symbol:Atoh8 "atonal homolog 8 (Drosophila)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:1918343 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:84913 eggNOG:NOG311369 HOGENOM:HOG000034181
HOVERGEN:HBG095605 KO:K09084 OMA:ETQPFRE OrthoDB:EOG4H9XN2
EMBL:AB046527 EMBL:AB046528 EMBL:AB049066 EMBL:AY349615
EMBL:BC023684 EMBL:AK016909 IPI:IPI00118539 RefSeq:NP_722473.1
UniGene:Mm.87449 ProteinModelPortal:Q99NA2 SMR:Q99NA2 STRING:Q99NA2
PRIDE:Q99NA2 Ensembl:ENSMUST00000042646 GeneID:71093 KEGG:mmu:71093
UCSC:uc009cic.1 GeneTree:ENSGT00440000034222 InParanoid:Q99NA2
ChiTaRS:ATOH8 NextBio:333009 Bgee:Q99NA2 CleanEx:MM_ATOH8
Genevestigator:Q99NA2 Uniprot:Q99NA2
Length = 322
Score = 106 (42.4 bits), Expect = 0.00032, P = 0.00032
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 230 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 284
>RGD|1561512 [details] [associations]
symbol:Atoh8 "atonal homolog 8 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1561512 Gene3D:4.10.280.10 SUPFAM:SSF47459
CTD:84913 KO:K09084 OrthoDB:EOG4H9XN2 GeneTree:ENSGT00440000034222
EMBL:CH473957 IPI:IPI00208633 RefSeq:NP_001102711.1
UniGene:Rn.18505 Ensembl:ENSRNOT00000014277 GeneID:500200
KEGG:rno:500200 UCSC:RGD:1561512 NextBio:705396 Uniprot:D4AA26
Length = 322
Score = 106 (42.4 bits), Expect = 0.00032, P = 0.00032
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQA 139
+T RL NARER R+H ++ A + LR +P Y++ +KLSK+A L +A NYIL A
Sbjct: 230 QTRRLLANARERTRVHTISAAFEALRKQVPCYSYG---QKLSKLAILRIACNYILSLA 284
>UNIPROTKB|Q9TX44 [details] [associations]
symbol:twi "Protein twist" species:7244 "Drosophila
virilis" [GO:0001710 "mesodermal cell fate commitment"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
[GO:0007370 "ventral furrow formation" evidence=ISS] [GO:0007443
"Malpighian tubule morphogenesis" evidence=ISS] [GO:0007498
"mesoderm development" evidence=ISS] [GO:0016202 "regulation of
striated muscle tissue development" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0046982
"protein heterodimerization activity" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0042803 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0007370 GO:GO:0046982 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0007443 GO:GO:0016202 GO:GO:0001710
InterPro:IPR015789 PANTHER:PTHR23349:SF6 eggNOG:NOG258515
OrthoDB:EOG4Z8WC0 EMBL:AY190956 ProteinModelPortal:Q9TX44
STRING:Q9TX44 FlyBase:FBgn0020065 InParanoid:Q9TX44 Uniprot:Q9TX44
Length = 519
Score = 108 (43.1 bits), Expect = 0.00033, P = 0.00033
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R+ N RER+R LNDA L+ +IP PS KLSKI TL LA YI L
Sbjct: 392 RVMANVRERQRTQSLNDAFKALQQIIPTL--PS-DKLSKIQTLKLATRYIDFLCRMLSSS 448
Query: 146 R-RIITYIQAQGTMTMPPGFDLQATML 171
++ ++AQ + + PG+ +T+L
Sbjct: 449 DISLLKALEAQSS-PVSPGYGNASTLL 474
>UNIPROTKB|G3N341 [details] [associations]
symbol:TWIST1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000802 "positive regulation of endocardial cushion to
mesenchymal transition involved in heart valve formation"
evidence=IEA] [GO:2000793 "cell proliferation involved in heart
valve development" evidence=IEA] [GO:2000780 "negative regulation
of double-strand break repair" evidence=IEA] [GO:2000778 "positive
regulation of interleukin-6 secretion" evidence=IEA] [GO:2000773
"negative regulation of cellular senescence" evidence=IEA]
[GO:2000679 "positive regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:2000276 "negative regulation of
oxidative phosphorylation uncoupler activity" evidence=IEA]
[GO:2000147 "positive regulation of cell motility" evidence=IEA]
[GO:0071639 "positive regulation of monocyte chemotactic protein-1
production" evidence=IEA] [GO:0071456 "cellular response to
hypoxia" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0060900 "embryonic camera-type eye formation" evidence=IEA]
[GO:0060363 "cranial suture morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0048642 "negative regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0043518 "negative regulation of
DNA damage response, signal transduction by p53 class mediator"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0035359 "negative regulation of peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0033128 "negative regulation of histone phosphorylation"
evidence=IEA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=IEA] [GO:0032000
"positive regulation of fatty acid beta-oxidation" evidence=IEA]
[GO:0030500 "regulation of bone mineralization" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=IEA] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA] [GO:0003183 "mitral valve
morphogenesis" evidence=IEA] [GO:0003180 "aortic valve
morphogenesis" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006915 GO:GO:0001764 GO:GO:0001701
GO:GO:0045944 GO:GO:0071456 GO:GO:0032000 GO:GO:0000122
GO:GO:0043518 GO:GO:0000981 GO:GO:0032720 GO:GO:0030500
GO:GO:0003183 GO:GO:0071639 GO:GO:0001843 GO:GO:0043433
GO:GO:0035116 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649
GO:GO:2000147 GO:GO:0035115 GO:GO:0042733 GO:GO:0048701
GO:GO:0061029 GO:GO:0045668 GO:GO:0070888 GO:GO:2000778
GO:GO:0032760 GO:GO:0035359 GO:GO:0003203 GO:GO:0060363
GO:GO:0035067 GO:GO:2000773 GO:GO:0048642 GO:GO:0003180
GO:GO:2000679 GO:GO:0014067 GO:GO:0003253
GeneTree:ENSGT00690000101840 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 InterPro:IPR015789 PANTHER:PTHR23349:SF6 KO:K09069
CTD:7291 OMA:MMQDVSS GO:GO:2000793 GO:GO:0033128 GO:GO:2000802
EMBL:DAAA02010096 RefSeq:NP_001178074.1 UniGene:Bt.14289
PRIDE:G3N341 Ensembl:ENSBTAT00000065629 GeneID:782170
KEGG:bta:782170 NextBio:20925287 Uniprot:G3N341
Length = 201
Score = 102 (41.0 bits), Expect = 0.00040, P = 0.00040
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 106 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVL 162
Query: 141 ALEEL 145
+EL
Sbjct: 163 QSDEL 167
>UNIPROTKB|F1RWI0 [details] [associations]
symbol:MSC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060539 "diaphragm development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0060539
KO:K09072 OMA:AGGCKRK GO:GO:0014707 GeneTree:ENSGT00690000101840
EMBL:FP085535 RefSeq:XP_003125643.1 UniGene:Ssc.50488
Ensembl:ENSSSCT00000006781 GeneID:100155518 KEGG:ssc:100155518
Uniprot:F1RWI0
Length = 201
Score = 102 (41.0 bits), Expect = 0.00040, P = 0.00040
Identities = 34/98 (34%), Positives = 46/98 (46%)
Query: 67 GAMGSLQPLAKKNRQGK---TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLS 123
G G +PL K + + R NARER RM L+ A L+ +P+ P KLS
Sbjct: 82 GGGGGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWV--PPDTKLS 139
Query: 124 KIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
K+ TL LA +YI L+E R Y+ +T P
Sbjct: 140 KLDTLRLASSYIAHLRQLLQEDRYENGYVHPVN-LTWP 176
>UNIPROTKB|Q15672 [details] [associations]
symbol:TWIST1 "Twist-related protein 1" species:9606 "Homo
sapiens" [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0003183 "mitral valve morphogenesis"
evidence=IEA] [GO:0003203 "endocardial cushion morphogenesis"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0032720 "negative regulation of
tumor necrosis factor production" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035359 "negative regulation of peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048642 "negative
regulation of skeletal muscle tissue development" evidence=IEA]
[GO:2000276 "negative regulation of oxidative phosphorylation
uncoupler activity" evidence=IEA] [GO:2000802 "positive regulation
of endocardial cushion to mesenchymal transition involved in heart
valve formation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048701 "embryonic
cranial skeleton morphogenesis" evidence=IMP] [GO:0043425 "bHLH
transcription factor binding" evidence=IPI] [GO:0014067 "negative
regulation of phosphatidylinositol 3-kinase cascade" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:2000679 "positive
regulation of transcription regulatory region DNA binding"
evidence=IMP] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0010628 "positive regulation of
gene expression" evidence=IMP] [GO:0061029 "eyelid development in
camera-type eye" evidence=IMP] [GO:0060900 "embryonic camera-type
eye formation" evidence=IMP] [GO:2000147 "positive regulation of
cell motility" evidence=IMP;NAS] [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0070888 "E-box binding" evidence=IDA] [GO:0030500
"regulation of bone mineralization" evidence=IMP] [GO:0003180
"aortic valve morphogenesis" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0043518 "negative regulation of DNA damage
response, signal transduction by p53 class mediator" evidence=IMP]
[GO:0033128 "negative regulation of histone phosphorylation"
evidence=IMP] [GO:0045766 "positive regulation of angiogenesis"
evidence=NAS] [GO:0071456 "cellular response to hypoxia"
evidence=IMP] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IMP] [GO:0032000 "positive
regulation of fatty acid beta-oxidation" evidence=IMP] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IMP] [GO:0071639 "positive regulation of monocyte
chemotactic protein-1 production" evidence=IMP] [GO:0060363
"cranial suture morphogenesis" evidence=TAS] [GO:0042733 "embryonic
digit morphogenesis" evidence=TAS] [GO:0001503 "ossification"
evidence=TAS] [GO:0042473 "outer ear morphogenesis" evidence=TAS]
[GO:2000773 "negative regulation of cellular senescence"
evidence=IMP] [GO:2000780 "negative regulation of double-strand
break repair" evidence=IMP] [GO:2000793 "cell proliferation
involved in heart valve development" evidence=IMP] [GO:2000778
"positive regulation of interleukin-6 secretion" evidence=IMP]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006915 GO:GO:0001764
GO:GO:0001701 GO:GO:0045944 GO:GO:0071456 GO:GO:0045766
EMBL:CH236948 GO:GO:0032000 GO:GO:0000122 GO:GO:0043518
GO:GO:0000981 GO:GO:0007517 GO:GO:0032720 GO:GO:0010718
GO:GO:0030500 GO:GO:0003183 GO:GO:0071639 GO:GO:0001843
GO:GO:0043433 GO:GO:0035116 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001649 GO:GO:2000147 GO:GO:0035115 GO:GO:0042733
GO:GO:0001503 GO:GO:0048701 GO:GO:0061029 GO:GO:0045668
GO:GO:0070888 GO:GO:2000778 GO:GO:0032760 GO:GO:0035359
GO:GO:0003203 GO:GO:0060363 GO:GO:0035067 GO:GO:2000773
GO:GO:0048642 GO:GO:0003180 GO:GO:0042473 Orphanet:794
Orphanet:35099 GO:GO:2000679 GO:GO:0014067 GO:GO:0003253
GO:GO:2000780 GO:GO:2000276 GO:GO:0060900 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069 EMBL:X91662
EMBL:X99268 EMBL:U80998 EMBL:Y10871 EMBL:AC003986 EMBL:BC036704
IPI:IPI00018907 PIR:G01204 RefSeq:NP_000465.1 UniGene:Hs.66744
ProteinModelPortal:Q15672 SMR:Q15672 IntAct:Q15672 STRING:Q15672
PhosphoSite:Q15672 DMDM:2498009 PRIDE:Q15672 DNASU:7291
Ensembl:ENST00000242261 GeneID:7291 KEGG:hsa:7291 UCSC:uc003sum.3
CTD:7291 GeneCards:GC07M019121 HGNC:HGNC:12428 MIM:101400
MIM:123100 MIM:180750 MIM:601622 neXtProt:NX_Q15672 Orphanet:35093
PharmGKB:PA37088 HOGENOM:HOG000261629 InParanoid:Q15672 OMA:MMQDVSS
PhylomeDB:Q15672 ChiTaRS:TWIST1 GenomeRNAi:7291 NextBio:28507
Bgee:Q15672 CleanEx:HS_TWIST1 Genevestigator:Q15672
GermOnline:ENSG00000122691 GO:GO:2000793 GO:GO:0033128
GO:GO:2000802 Uniprot:Q15672
Length = 202
Score = 102 (41.0 bits), Expect = 0.00041, P = 0.00041
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 107 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVL 163
Query: 141 ALEEL 145
+EL
Sbjct: 164 QSDEL 168
>UNIPROTKB|Q90YI8 [details] [associations]
symbol:tal1 "T-cell acute lymphocytic leukemia protein 1"
species:31033 "Takifugu rubripes" [GO:0001525 "angiogenesis"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0030099 "myeloid cell
differentiation" evidence=ISS] [GO:0030218 "erythrocyte
differentiation" evidence=ISS] [GO:0048844 "artery morphogenesis"
evidence=ISS] [GO:0060214 "endocardium formation" evidence=ISS]
[GO:0060215 "primitive hemopoiesis" evidence=ISS] [GO:0060216
"definitive hemopoiesis" evidence=ISS] [GO:0060217 "hemangioblast
cell differentiation" evidence=ISS] [GO:0060218 "hematopoietic stem
cell differentiation" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0003007 GO:GO:0006351 GO:GO:0001525
GO:GO:0060218 GO:GO:0030218 GO:GO:0045603 GO:GO:0001570
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048844 GO:GO:0048368
GO:GO:0035050 GO:GO:0060216 GO:GO:0030878 GO:GO:0060217
eggNOG:NOG307510 HOGENOM:HOG000113414 GO:GO:0060214 GO:GO:0048823
EMBL:AJ131019 ProteinModelPortal:Q90YI8 STRING:Q90YI8
InParanoid:Q90YI8 Uniprot:Q90YI8
Length = 371
Score = 106 (42.4 bits), Expect = 0.00041, P = 0.00041
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 81 QGKTVR-LNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQA 139
+ K VR + N+RER R ++N A ELR +IP H P +KLSK L LA YI +
Sbjct: 200 EAKIVRRIFTNSRERWRQQNVNGAFAELRKLIP-THPPD-KKLSKNEILRLAMKYISFLS 257
Query: 140 NALEE 144
N LE+
Sbjct: 258 NLLED 262
>UNIPROTKB|Q9EPJ1 [details] [associations]
symbol:Twist1 "Twist homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003180 "aortic valve morphogenesis" evidence=IEA] [GO:0003183
"mitral valve morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003253 "cardiac neural
crest cell migration involved in outflow tract morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0014067 "negative regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0030500
"regulation of bone mineralization" evidence=IEA] [GO:0032000
"positive regulation of fatty acid beta-oxidation" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0033128 "negative
regulation of histone phosphorylation" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035359 "negative regulation of peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048642 "negative regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0060363 "cranial suture
morphogenesis" evidence=IEA] [GO:0060900 "embryonic camera-type eye
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0071639 "positive regulation of monocyte
chemotactic protein-1 production" evidence=IEA] [GO:2000147
"positive regulation of cell motility" evidence=IEA] [GO:2000276
"negative regulation of oxidative phosphorylation uncoupler
activity" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:2000773 "negative regulation of cellular senescence"
evidence=IEA] [GO:2000778 "positive regulation of interleukin-6
secretion" evidence=IEA] [GO:2000780 "negative regulation of
double-strand break repair" evidence=IEA] [GO:2000793 "cell
proliferation involved in heart valve development" evidence=IEA]
[GO:2000802 "positive regulation of endocardial cushion to
mesenchymal transition involved in heart valve formation"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:621455 GO:GO:0005634 GO:GO:0006915 GO:GO:0001764
GO:GO:0001701 GO:GO:0045944 GO:GO:0071456 GO:GO:0032000
GO:GO:0000122 GO:GO:0043518 GO:GO:0000981 GO:GO:0032720
GO:GO:0030500 GO:GO:0003183 GO:GO:0071639 GO:GO:0001843
GO:GO:0043433 GO:GO:0035116 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001649 GO:GO:2000147 GO:GO:0035115 GO:GO:0042733
GO:GO:0048701 GO:GO:0061029 GO:GO:0045668 GO:GO:0070888
GO:GO:2000778 GO:GO:0032760 GO:GO:0035359 HSSP:P01106 GO:GO:0003203
GO:GO:0060363 GO:GO:0035067 GO:GO:2000773 GO:GO:0048642
GO:GO:0003180 GO:GO:2000679 GO:GO:0014067 GO:GO:0003253
GeneTree:ENSGT00690000101840 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069 CTD:7291
HOGENOM:HOG000261629 OMA:MMQDVSS GO:GO:2000793 GO:GO:0033128
GO:GO:2000802 OrthoDB:EOG434W7J EMBL:BC166412 EMBL:AJ131845
IPI:IPI00189140 RefSeq:NP_445982.1 UniGene:Rn.161904 STRING:Q9EPJ1
Ensembl:ENSRNOT00000014763 GeneID:85489 KEGG:rno:85489
InParanoid:Q9EPJ1 NextBio:617570 Genevestigator:Q9EPJ1
Uniprot:Q9EPJ1
Length = 203
Score = 102 (41.0 bits), Expect = 0.00042, P = 0.00042
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 108 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVL 164
Query: 141 ALEEL 145
+EL
Sbjct: 165 QSDEL 169
>MGI|MGI:98872 [details] [associations]
symbol:Twist1 "twist basic helix-loop-helix transcription
factor 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=TAS]
[GO:0001503 "ossification" evidence=IMP] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0003180 "aortic valve morphogenesis" evidence=ISO;IMP]
[GO:0003183 "mitral valve morphogenesis" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=ISO;IMP] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030326 "embryonic limb
morphogenesis" evidence=IMP] [GO:0030500 "regulation of bone
mineralization" evidence=ISO] [GO:0032000 "positive regulation of
fatty acid beta-oxidation" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IGI]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=ISO] [GO:0033128 "negative regulation of
histone phosphorylation" evidence=ISO] [GO:0035067 "negative
regulation of histone acetylation" evidence=IDA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IMP] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IMP] [GO:0035137
"hindlimb morphogenesis" evidence=IMP] [GO:0035359 "negative
regulation of peroxisome proliferator activated receptor signaling
pathway" evidence=IDA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043518 "negative regulation of DNA damage
response, signal transduction by p53 class mediator" evidence=ISO]
[GO:0044092 "negative regulation of molecular function"
evidence=IDA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=ISO;IDA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA;TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048642 "negative
regulation of skeletal muscle tissue development" evidence=IDA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=ISO;IGI;IMP] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IMP] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISO] [GO:0060363 "cranial
suture morphogenesis" evidence=IMP] [GO:0060900 "embryonic
camera-type eye formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061309 "cardiac
neural crest cell development involved in outflow tract
morphogenesis" evidence=IMP] [GO:0070888 "E-box binding"
evidence=ISO;IDA;TAS] [GO:0071456 "cellular response to hypoxia"
evidence=ISO;IMP] [GO:0071639 "positive regulation of monocyte
chemotactic protein-1 production" evidence=ISO] [GO:2000147
"positive regulation of cell motility" evidence=ISO;IMP]
[GO:2000276 "negative regulation of oxidative phosphorylation
uncoupler activity" evidence=IDA] [GO:2000679 "positive regulation
of transcription regulatory region DNA binding" evidence=ISO]
[GO:2000773 "negative regulation of cellular senescence"
evidence=ISO] [GO:2000778 "positive regulation of interleukin-6
secretion" evidence=ISO] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISO] [GO:2000793 "cell
proliferation involved in heart valve development"
evidence=ISO;IMP] [GO:2000802 "positive regulation of endocardial
cushion to mesenchymal transition involved in heart valve
formation" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:98872 GO:GO:0005634
GO:GO:0006915 GO:GO:0001764 GO:GO:0042803 GO:GO:0001701
GO:GO:0071456 GO:GO:0032000 GO:GO:0001077 GO:GO:0000122
GO:GO:0043518 GO:GO:0007517 GO:GO:0032720 GO:GO:0030500
GO:GO:0003183 GO:GO:0046982 GO:GO:0071639 GO:GO:0001843
GO:GO:0043433 GO:GO:0035116 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001649 GO:GO:2000147 GO:GO:0035115 GO:GO:0042733
GO:GO:0048701 GO:GO:0061029 GO:GO:0045668 GO:GO:0070888
GO:GO:2000778 GO:GO:0032760 GO:GO:0035359 GO:GO:0003203
GO:GO:0060363 GO:GO:0035067 GO:GO:2000773 GO:GO:0048642
GO:GO:0003180 GO:GO:2000679 GO:GO:0014067 GO:GO:0003253
GeneTree:ENSGT00690000101840 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 InterPro:IPR015789 PANTHER:PTHR23349:SF6
eggNOG:NOG258515 KO:K09069 CTD:7291 HOGENOM:HOG000261629
OMA:MMQDVSS GO:GO:2000793 GO:GO:0033128 GO:GO:2000802 EMBL:M63649
EMBL:M63650 EMBL:BC033434 EMBL:BC083139 IPI:IPI00115425 PIR:I53066
RefSeq:NP_035788.1 UniGene:Mm.3280 ProteinModelPortal:P26687
SMR:P26687 IntAct:P26687 STRING:P26687 PhosphoSite:P26687
PRIDE:P26687 Ensembl:ENSMUST00000049089 GeneID:22160 KEGG:mmu:22160
UCSC:uc007cbd.1 InParanoid:P26687 OrthoDB:EOG434W7J NextBio:302090
PMAP-CutDB:P26687 Bgee:P26687 CleanEx:MM_TWIST1
Genevestigator:P26687 GermOnline:ENSMUSG00000035799 Uniprot:P26687
Length = 206
Score = 102 (41.0 bits), Expect = 0.00044, P = 0.00044
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 83 KTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI--LMQAN 140
+T R+ N RER+R LN+A LR +IP PS KLSKI TL LA YI L Q
Sbjct: 111 QTQRVMANVRERQRTQSLNEAFAALRKIIPTL--PS-DKLSKIQTLKLAARYIDFLYQVL 167
Query: 141 ALEEL 145
+EL
Sbjct: 168 QSDEL 172
>MGI|MGI:1328312 [details] [associations]
symbol:Ptf1a "pancreas specific transcription factor, 1a"
species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IC] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009790 "embryo development"
evidence=IDA] [GO:0009888 "tissue development" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030902
"hindbrain development" evidence=IDA] [GO:0031016 "pancreas
development" evidence=IMP] [GO:0031017 "exocrine pancreas
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IDA] [GO:0048663 "neuron fate commitment" evidence=IDA]
[GO:0048699 "generation of neurons" evidence=IDA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IMP]
Reactome:REACT_13641 InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:1328312 GO:GO:0005829
GO:GO:0043565 GO:GO:0005667 GO:GO:0001077 GO:GO:0009790
Reactome:REACT_127416 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0030902 GO:GO:0031018 GO:GO:0048384
GeneTree:ENSGT00680000099574 GO:GO:0048663 GO:GO:0031017
GO:GO:0009888 GO:GO:0060042 CTD:256297 eggNOG:NOG288112
HOGENOM:HOG000231913 HOVERGEN:HBG082224 KO:K09073 OMA:HQLHEYC
OrthoDB:EOG4RXZ16 EMBL:AB035674 EMBL:AB035675 EMBL:AF298116
EMBL:AJ252156 EMBL:AK007922 IPI:IPI00136104 RefSeq:NP_061279.2
UniGene:Mm.69647 ProteinModelPortal:Q9QX98 SMR:Q9QX98 STRING:Q9QX98
PhosphoSite:Q9QX98 PRIDE:Q9QX98 Ensembl:ENSMUST00000028068
GeneID:19213 KEGG:mmu:19213 InParanoid:Q9QX98 NextBio:295964
Bgee:Q9QX98 CleanEx:MM_PTF1A Genevestigator:Q9QX98
GermOnline:ENSMUSG00000026735 Uniprot:Q9QX98
Length = 324
Score = 105 (42.0 bits), Expect = 0.00045, P = 0.00045
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+R N RERRRM +NDA + LR+ IP P ++LSK+ TL LA YI N L E
Sbjct: 161 LRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEKRLSKVDTLRLAIGYI----NFLSE 214
Query: 145 L 145
L
Sbjct: 215 L 215
>UNIPROTKB|G5E6S8 [details] [associations]
symbol:PTF1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0009888
"tissue development" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0043565
GO:GO:0005667 GO:GO:0001077 GO:GO:0009790 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0030902 GO:GO:0031016 GO:GO:0048384
GeneTree:ENSGT00680000099574 GO:GO:0048663 GO:GO:0009888
GO:GO:0060042 OMA:HQLHEYC EMBL:DAAA02035454
Ensembl:ENSBTAT00000062968 Uniprot:G5E6S8
Length = 325
Score = 105 (42.0 bits), Expect = 0.00045, P = 0.00045
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+R N RERRRM +NDA + LR+ IP P ++LSK+ TL LA YI N L E
Sbjct: 162 LRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEKRLSKVDTLRLAIGYI----NFLSE 215
Query: 145 L 145
L
Sbjct: 216 L 216
>UNIPROTKB|Q6UDE8 [details] [associations]
symbol:ptf1a "Pancreas-specific transcription factor 1a"
species:8355 "Xenopus laevis" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0009888 "tissue development" evidence=ISS]
[GO:0030902 "hindbrain development" evidence=ISS] [GO:0031017
"exocrine pancreas development" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISS] [GO:0048699 "generation of neurons" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 GO:GO:0005667
GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030902
GO:GO:0048384 GO:GO:0048699 GO:GO:0031017 GO:GO:0009888
HOVERGEN:HBG082224 EMBL:AY372268 UniGene:Xl.29862
ProteinModelPortal:Q6UDE8 Uniprot:Q6UDE8
Length = 267
Score = 104 (41.7 bits), Expect = 0.00045, P = 0.00045
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 77 KKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
+ + + + +R N RERRRM +NDA + LR+ IP P ++LSK+ TL LA YI
Sbjct: 112 RSDAEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEKRLSKVDTLRLAIGYI 168
>UNIPROTKB|I3LMI3 [details] [associations]
symbol:PTF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0009888
"tissue development" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0043565
GO:GO:0005667 GO:GO:0001077 GO:GO:0009790 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0030902 GO:GO:0031016 GO:GO:0048384
GeneTree:ENSGT00680000099574 GO:GO:0048663 GO:GO:0009888
GO:GO:0060042 KO:K09073 OMA:HQLHEYC EMBL:FP325248
RefSeq:XP_003357806.1 Ensembl:ENSSSCT00000028603 GeneID:100623168
KEGG:ssc:100623168 Uniprot:I3LMI3
Length = 328
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 85 VRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEE 144
+R N RERRRM +NDA + LR+ IP P ++LSK+ TL LA YI N L E
Sbjct: 165 LRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEKRLSKVDTLRLAIGYI----NFLSE 218
Query: 145 L 145
L
Sbjct: 219 L 219
>UNIPROTKB|Q4ZHW1 [details] [associations]
symbol:ptf1a "Pancreas transcription factor 1 subunit
alpha" species:8355 "Xenopus laevis" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0009888 "tissue development" evidence=ISS]
[GO:0030902 "hindbrain development" evidence=ISS] [GO:0031017
"exocrine pancreas development" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISS] [GO:0048699 "generation of neurons" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0005667 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0030902 GO:GO:0048384 GO:GO:0048699 GO:GO:0031017
GO:GO:0009888 HOVERGEN:HBG082224 KO:K09073 EMBL:DQ007931
RefSeq:NP_001167491.1 UniGene:Xl.85876 ProteinModelPortal:Q4ZHW1
GeneID:100381084 KEGG:xla:100381084 Xenbase:XB-GENE-6466546
Uniprot:Q4ZHW1
Length = 270
Score = 104 (41.7 bits), Expect = 0.00046, P = 0.00046
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 77 KKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
+ + + + +R N RERRRM +NDA + LR+ IP P ++LSK+ TL LA YI
Sbjct: 112 RSDAEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTL--PYEKRLSKVDTLRLAIGYI 168
>RGD|1589398 [details] [associations]
symbol:Tcf24 "transcription factor 24" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1589398 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:GQFLKHS IPI:IPI00766489 Ensembl:ENSRNOT00000046426
Uniprot:F1LYM6
Length = 138
Score = 95 (38.5 bits), Expect = 0.00049, P = 0.00049
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 58 SRFQDPTHSGAMGSLQP--LAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAH 115
+R P +GA G P +A ++ G+ N ARER R+ L A EL+ +P
Sbjct: 17 ARDSSPGQTGA-GPTGPGGVAARSGSGRPAAANA-ARERSRVQTLRHAFLELQRTLPSV- 73
Query: 116 SPSVRKLSKIATLLLAKNYILMQANALEE 144
P KLSK+ LLLA YI +L++
Sbjct: 74 -PPDTKLSKLDVLLLATTYIAHLTRSLQD 101
>UNIPROTKB|P61296 [details] [associations]
symbol:HAND2 "Heart- and neural crest derivatives-expressed
protein 2" species:9606 "Homo sapiens" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003253 "cardiac neural crest cell migration involved in
outflow tract morphogenesis" evidence=IEA] [GO:0010463 "mesenchymal
cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043392 "negative regulation of
DNA binding" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060982 "coronary artery morphogenesis" evidence=IEA]
[GO:0061032 "visceral serous pericardium development" evidence=IEA]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=IDA] [GO:0007507 "heart development" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0070888 "E-box binding" evidence=ISS;IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0003357 "noradrenergic neuron differentiation" evidence=NAS]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0061309 "cardiac neural crest cell
development involved in outflow tract morphogenesis" evidence=ISS]
[GO:0048538 "thymus development" evidence=ISS] [GO:0010667
"negative regulation of cardiac muscle cell apoptotic process"
evidence=ISS] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0001947 "heart looping"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042803 "protein
homodimerization activity" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0003007 "heart
morphogenesis" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0014032 "neural crest cell development"
evidence=ISS] [GO:0007512 "adult heart development" evidence=IEP]
[GO:2000763 "positive regulation of transcription from RNA
polymerase II promoter involved in norepinephrine biosynthetic
process" evidence=ISS] [GO:2000764 "positive regulation of
semaphorin-plexin signaling pathway involved in outflow tract
morphogenesis" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0006915 GO:GO:0042803
GO:GO:0001701 GO:GO:0001967 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0000790 GO:GO:0003713 EMBL:CH471056
GO:GO:0007512 GO:GO:0042475 GO:GO:0048538 GO:GO:0043433
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0060021
GO:GO:0042733 GO:GO:0048485 GO:GO:0000977 GO:GO:0045668
GO:GO:0070888 GO:GO:0003680 GO:GO:0048935 GO:GO:0043392
GO:GO:0060536 GO:GO:0003266 GO:GO:0060982 GO:GO:0061032
GO:GO:0043586 GO:GO:0010463 GO:GO:2000679 GO:GO:0033613
eggNOG:NOG259520 HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071
OrthoDB:EOG4FTW1T GO:GO:0003219 CTD:9464 EMBL:AF087940
EMBL:AF087941 EMBL:FJ226608 IPI:IPI00029953 RefSeq:NP_068808.1
UniGene:Hs.388245 ProteinModelPortal:P61296 SMR:P61296
STRING:P61296 PhosphoSite:P61296 DMDM:47117699 PaxDb:P61296
PRIDE:P61296 Ensembl:ENST00000359562 GeneID:9464 KEGG:hsa:9464
UCSC:uc003ith.1 GeneCards:GC04M174447 HGNC:HGNC:4808 HPA:CAB025576
MIM:602407 neXtProt:NX_P61296 PharmGKB:PA29184 InParanoid:P61296
OMA:ATRCGHE PhylomeDB:P61296 GenomeRNAi:9464 NextBio:35460
ArrayExpress:P61296 Bgee:P61296 CleanEx:HS_HAND2
Genevestigator:P61296 GermOnline:ENSG00000164107 GO:GO:0061309
GO:GO:0003253 GO:GO:0061325 GO:GO:0010667 GO:GO:0003357
GO:GO:2000764 GO:GO:2000763 Uniprot:P61296
Length = 217
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 66 PEYASGAAGL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 123
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 124 ECIP--NVPADTKLSKIKTLRLATSYI 148
>MGI|MGI:103580 [details] [associations]
symbol:Hand2 "heart and neural crest derivatives expressed
transcript 2" species:10090 "Mus musculus" [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001947 "heart looping"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003219
"cardiac right ventricle formation" evidence=IMP] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=IMP] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IGI] [GO:0007512 "adult heart development" evidence=IMP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0010463 "mesenchymal cell proliferation" evidence=IMP]
[GO:0010667 "negative regulation of cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043392 "negative regulation of DNA binding" evidence=IDA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0043586 "tongue
development" evidence=IMP] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IDA] [GO:0048538
"thymus development" evidence=IMP] [GO:0048935 "peripheral nervous
system neuron development" evidence=IDA] [GO:0060021 "palate
development" evidence=IMP] [GO:0060485 "mesenchyme development"
evidence=IGI] [GO:0060536 "cartilage morphogenesis" evidence=IGI]
[GO:0060982 "coronary artery morphogenesis" evidence=IMP]
[GO:0061032 "visceral serous pericardium development" evidence=IMP]
[GO:0061309 "cardiac neural crest cell development involved in
outflow tract morphogenesis" evidence=IMP] [GO:0061325 "cell
proliferation involved in outflow tract morphogenesis"
evidence=IMP] [GO:0061371 "determination of heart left/right
asymmetry" evidence=IMP] [GO:0070888 "E-box binding"
evidence=ISO;IDA] [GO:2000679 "positive regulation of transcription
regulatory region DNA binding" evidence=ISO] [GO:2000763 "positive
regulation of transcription from RNA polymerase II promoter
involved in norepinephrine biosynthetic process" evidence=IMP]
[GO:2000764 "positive regulation of semaphorin-plexin signaling
pathway involved in outflow tract morphogenesis" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:103580 GO:GO:0006915 GO:GO:0043565 GO:GO:0001701
GO:GO:0001967 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0000790 GO:GO:0003713 GO:GO:0007512 GO:GO:0042475
GO:GO:0048538 GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0060021 GO:GO:0042733 GO:GO:0048485
GO:GO:0000977 GO:GO:0045668 GO:GO:0070888 GO:GO:0003680
GO:GO:0048935 GO:GO:0043392 GO:GO:0060536 GO:GO:0003266
GO:GO:0060982 GO:GO:0061032 GO:GO:0043586 GO:GO:0010463
GO:GO:2000679 GO:GO:0033613 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OrthoDB:EOG4FTW1T GO:GO:0003219
CTD:9464 OMA:ATRCGHE GO:GO:0003253 GO:GO:0061325 GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:U40039 EMBL:AK035160 EMBL:U43715
IPI:IPI00116995 RefSeq:NP_034532.3 UniGene:Mm.430844
ProteinModelPortal:Q61039 SMR:Q61039 IntAct:Q61039 STRING:Q61039
PhosphoSite:Q61039 PRIDE:Q61039 Ensembl:ENSMUST00000040104
GeneID:15111 KEGG:mmu:15111 UCSC:uc009lss.2 InParanoid:Q61039
ChiTaRS:HAND2 NextBio:287514 Bgee:Q61039 Genevestigator:Q61039
GermOnline:ENSMUSG00000038193 Uniprot:Q61039
Length = 217
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 66 PEYASGAAGL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 123
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 124 ECIP--NVPADTKLSKIKTLRLATSYI 148
>RGD|621207 [details] [associations]
symbol:Hand2 "heart and neural crest derivatives expressed 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0001947 "heart looping"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=ISO]
[GO:0003007 "heart morphogenesis" evidence=ISO] [GO:0003219
"cardiac right ventricle formation" evidence=ISO] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=ISO] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;ISO;IDA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0007507 "heart
development" evidence=ISO;IEP] [GO:0007512 "adult heart
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0010463 "mesenchymal cell
proliferation" evidence=ISO] [GO:0010667 "negative regulation of
cardiac muscle cell apoptotic process" evidence=ISO] [GO:0014032
"neural crest cell development" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IPI] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISO]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043392 "negative regulation of DNA binding" evidence=ISO]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0043586 "tongue
development" evidence=ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048485 "sympathetic
nervous system development" evidence=ISO] [GO:0048538 "thymus
development" evidence=ISO] [GO:0048935 "peripheral nervous system
neuron development" evidence=ISO] [GO:0060021 "palate development"
evidence=ISO] [GO:0060485 "mesenchyme development" evidence=ISO]
[GO:0060536 "cartilage morphogenesis" evidence=ISO] [GO:0060982
"coronary artery morphogenesis" evidence=ISO] [GO:0061032 "visceral
serous pericardium development" evidence=ISO] [GO:0061309 "cardiac
neural crest cell development involved in outflow tract
morphogenesis" evidence=ISO] [GO:0061325 "cell proliferation
involved in outflow tract morphogenesis" evidence=ISO] [GO:0061371
"determination of heart left/right asymmetry" evidence=ISO]
[GO:0070888 "E-box binding" evidence=ISO] [GO:0071300 "cellular
response to retinoic acid" evidence=IEP] [GO:0071407 "cellular
response to organic cyclic compound" evidence=IEP] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] [GO:2000763 "positive regulation of
transcription from RNA polymerase II promoter involved in
norepinephrine biosynthetic process" evidence=ISO] [GO:2000764
"positive regulation of semaphorin-plexin signaling pathway
involved in outflow tract morphogenesis" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:621207 GO:GO:0005634 GO:GO:0019904 GO:GO:0007507 GO:GO:0030154
GO:GO:0003677 GO:GO:0071300 GO:GO:0045944 GO:GO:0006351
GO:GO:0001525 GO:GO:0003713 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071407 eggNOG:NOG259520 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OrthoDB:EOG4FTW1T CTD:9464 EMBL:Y08138
IPI:IPI00206227 RefSeq:NP_073187.1 UniGene:Rn.41057
ProteinModelPortal:P61295 SMR:P61295 STRING:P61295 PRIDE:P61295
GeneID:64637 KEGG:rno:64637 NextBio:613616 Genevestigator:P61295
GermOnline:ENSRNOG00000022069 Uniprot:P61295
Length = 217
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 66 PEYASGAAGL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 123
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 124 ECIP--NVPADTKLSKIKTLRLATSYI 148
>UNIPROTKB|P61295 [details] [associations]
symbol:Hand2 "Heart- and neural crest derivatives-expressed
protein 2" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:621207 GO:GO:0005634
GO:GO:0019904 GO:GO:0007507 GO:GO:0030154 GO:GO:0003677
GO:GO:0071300 GO:GO:0045944 GO:GO:0006351 GO:GO:0001525
GO:GO:0003713 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0071407
eggNOG:NOG259520 HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071
OrthoDB:EOG4FTW1T CTD:9464 EMBL:Y08138 IPI:IPI00206227
RefSeq:NP_073187.1 UniGene:Rn.41057 ProteinModelPortal:P61295
SMR:P61295 STRING:P61295 PRIDE:P61295 GeneID:64637 KEGG:rno:64637
NextBio:613616 Genevestigator:P61295 GermOnline:ENSRNOG00000022069
Uniprot:P61295
Length = 217
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 66 PEYASGAAGL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 123
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 124 ECIP--NVPADTKLSKIKTLRLATSYI 148
>UNIPROTKB|F1PX30 [details] [associations]
symbol:HAND2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 OMA:ATRCGHE EMBL:AAEX03014311
Ensembl:ENSCAFT00000012546 Uniprot:F1PX30
Length = 222
Score = 102 (41.0 bits), Expect = 0.00054, P = 0.00054
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 51 PEHLSHNSRFQDPTHSGAM--GSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELR 108
PE+ S + D +H G + G+ P R K R N +ERRR +N A ELR
Sbjct: 71 PEYASGAAGL-DHSHYGGVPPGAGPPGLGGPRPVKR-RGTANRKERRRTQSINSAFAELR 128
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYI 135
IP + P+ KLSKI TL LA +YI
Sbjct: 129 ECIP--NVPADTKLSKIKTLRLATSYI 153
>MGI|MGI:1333884 [details] [associations]
symbol:Msc "musculin" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IGI] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0060021 "palate development"
evidence=IGI] [GO:0060539 "diaphragm development" evidence=IGI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:1333884 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021
GO:GO:0060539 CTD:9242 eggNOG:NOG289886 HOGENOM:HOG000261670
HOVERGEN:HBG105298 KO:K09072 OMA:AGGCKRK OrthoDB:EOG47M203
GO:GO:0014707 EMBL:AF087035 EMBL:AF108216 EMBL:BC103592
EMBL:BC103593 EMBL:BC103594 EMBL:BC103623 IPI:IPI00136428
RefSeq:NP_034957.1 UniGene:Mm.5820 ProteinModelPortal:O88940
SMR:O88940 STRING:O88940 PhosphoSite:O88940 PRIDE:O88940
Ensembl:ENSMUST00000027062 GeneID:17681 KEGG:mmu:17681
UCSC:uc007aja.1 GeneTree:ENSGT00690000101840 InParanoid:Q3ZAZ1
NextBio:292244 Bgee:O88940 CleanEx:MM_MSC Genevestigator:O88940
GermOnline:ENSMUSG00000025930 Uniprot:O88940
Length = 201
Score = 101 (40.6 bits), Expect = 0.00059, P = 0.00059
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 66 SGAMGSLQPLAKKNRQGK---TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
+G G +PL K + + R NARER RM L+ A L+ +P+ P KL
Sbjct: 82 AGGAGK-KPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWV--PPDTKL 138
Query: 123 SKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
SK+ TL LA +YI L+E R +Y+ +T P
Sbjct: 139 SKLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVN-LTWP 176
>RGD|1305496 [details] [associations]
symbol:Msc "musculin" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA;ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA;ISO] [GO:0060539 "diaphragm development"
evidence=IEA;ISO] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:1305496 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0060539 CTD:9242 KO:K09072
OMA:AGGCKRK OrthoDB:EOG47M203 GO:GO:0014707
GeneTree:ENSGT00690000101840 IPI:IPI00366356 RefSeq:NP_001178683.1
UniGene:Rn.110583 Ensembl:ENSRNOT00000009908 GeneID:312897
KEGG:rno:312897 UCSC:RGD:1305496 NextBio:665339 Uniprot:D3ZWP1
Length = 203
Score = 101 (40.6 bits), Expect = 0.00061, P = 0.00061
Identities = 33/98 (33%), Positives = 48/98 (48%)
Query: 66 SGAMG--SLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLS 123
+G+ G +L P ++ R NARER RM L+ A L+ +P+ P KLS
Sbjct: 84 AGSTGKKALPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWV--PPDTKLS 141
Query: 124 KIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
K+ TL LA +YI L+E R +Y+ +T P
Sbjct: 142 KLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVN-LTWP 178
>UNIPROTKB|F1NJS8 [details] [associations]
symbol:FERD3L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0045892 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00680000099574 EMBL:AADN02000898 IPI:IPI00579603
Ensembl:ENSGALT00000017660 OMA:CSRQEAS Uniprot:F1NJS8
Length = 163
Score = 98 (39.6 bits), Expect = 0.00068, P = 0.00068
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 90 NARERRRMHDLNDALDELRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQANALEELRR 147
N RER+RM +LN+A D+LR +P +A+ ++LS+I TL LA YI L R
Sbjct: 104 NIRERKRMFNLNEAFDQLRKKVPTFAYE---KRLSRIETLRLAIVYISFMTELLNGCSR 159
>ZFIN|ZDB-GENE-980526-235 [details] [associations]
symbol:twist2 "twist2" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-980526-235 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 OMA:DNKMSSC
EMBL:CU929427 EMBL:BC083313 EMBL:EF620931 IPI:IPI00481132
RefSeq:NP_001005956.1 UniGene:Dr.36752 Ensembl:ENSDART00000114814
GeneID:30395 KEGG:dre:30395 NextBio:20806806 Uniprot:Q5XJI8
Length = 163
Score = 98 (39.6 bits), Expect = 0.00068, P = 0.00068
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 47 DENCPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDE 106
D + P S N R + P+ S S + L +N+ R+ N RER+R LN+A
Sbjct: 42 DSSSPS--SVNKRNKKPSPSSTQ-SFEEL--QNQ-----RVLANVRERQRTQSLNEAFAS 91
Query: 107 LRAVIPYAHSPSVRKLSKIATLLLAKNYI 135
LR +IP PS KLSKI TL LA YI
Sbjct: 92 LRKIIPTL--PS-DKLSKIQTLKLASRYI 117
>UNIPROTKB|G3X7V5 [details] [associations]
symbol:MSC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060539 "diaphragm development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0060539
CTD:9242 KO:K09072 OMA:AGGCKRK GO:GO:0014707
GeneTree:ENSGT00690000101840 EMBL:DAAA02038813
RefSeq:NP_001179075.1 UniGene:Bt.100731 Ensembl:ENSBTAT00000046864
GeneID:507407 KEGG:bta:507407 NextBio:20868042 Uniprot:G3X7V5
Length = 197
Score = 100 (40.3 bits), Expect = 0.00075, P = 0.00075
Identities = 35/102 (34%), Positives = 48/102 (47%)
Query: 63 PTHSGAMGSLQPLAKKNRQGK---TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSV 119
P +G G +PL K + + R NARER RM L+ A L+ +P+ P
Sbjct: 75 PRVAGG-GGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWV--PPD 131
Query: 120 RKLSKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
KLSK+ TL LA +YI L+E R Y+ +T P
Sbjct: 132 TKLSKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVN-LTWP 172
>WB|WBGene00001954 [details] [associations]
symbol:hlh-10 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101840
EMBL:FO081193 PIR:T29971 UniGene:Cel.1283 ProteinModelPortal:Q23579
SMR:Q23579 IntAct:Q23579 STRING:Q23579 EnsemblMetazoa:ZK682.4
UCSC:ZK682.4 WormBase:ZK682.4 eggNOG:NOG297849 InParanoid:Q23579
NextBio:949028 Uniprot:Q23579
Length = 202
Score = 100 (40.3 bits), Expect = 0.00081, P = 0.00081
Identities = 32/104 (30%), Positives = 48/104 (46%)
Query: 48 ENCPEHLSHNSRFQDPTHSGAMGSLQPLAKKNRQGK--TVRLNINARERRRMHDLNDALD 105
+N E N PT + + + GK T R NARER R+ L+ D
Sbjct: 83 QNKSEVNDENESTPSPTQNSRRRTSTGKIDRRMVGKMCTRRYEANARERNRVQQLSKMFD 142
Query: 106 ELRAVIPYAHSPSVRKLSKIATLLLAKNYI-----LMQANALEE 144
+LR +P K+SK+ATL +A +YI ++Q N+ +E
Sbjct: 143 QLRVCLPIEDDA---KISKLATLKVASSYIGYLGAILQENSNDE 183
>UNIPROTKB|O60682 [details] [associations]
symbol:MSC "Musculin" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0060539 "diaphragm development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003714
GO:GO:0003677 GO:GO:0003700 GO:GO:0006366 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0060021 GO:GO:0060539 EMBL:CH471068
EMBL:AF060154 EMBL:BT007169 EMBL:BC006313 EMBL:BC067827
EMBL:AF087036 IPI:IPI00031032 RefSeq:NP_005089.2 UniGene:Hs.442619
ProteinModelPortal:O60682 SMR:O60682 IntAct:O60682
MINT:MINT-1458979 STRING:O60682 PhosphoSite:O60682 PRIDE:O60682
DNASU:9242 Ensembl:ENST00000325509 GeneID:9242 KEGG:hsa:9242
UCSC:uc003xyx.1 CTD:9242 GeneCards:GC08M072803 H-InvDB:HIX0025546
HGNC:HGNC:7321 MIM:603628 neXtProt:NX_O60682 PharmGKB:PA31130
eggNOG:NOG289886 HOGENOM:HOG000261670 HOVERGEN:HBG105298
InParanoid:O60682 KO:K09072 OMA:AGGCKRK OrthoDB:EOG47M203
ChiTaRS:MSC GenomeRNAi:9242 NextBio:34649 Bgee:O60682
CleanEx:HS_MSC Genevestigator:O60682 GermOnline:ENSG00000178860
GO:GO:0014707 Uniprot:O60682
Length = 206
Score = 100 (40.3 bits), Expect = 0.00086, P = 0.00086
Identities = 34/99 (34%), Positives = 46/99 (46%)
Query: 66 SGAMGSLQPLAKKNRQGK---TVRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKL 122
S G +PL K + + R NARER RM L+ A L+ +P+ P KL
Sbjct: 86 SAGGGGKKPLPAKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWV--PPDTKL 143
Query: 123 SKIATLLLAKNYILMQANALEELRRIITYIQAQGTMTMP 161
SK+ TL LA +YI L+E R Y+ +T P
Sbjct: 144 SKLDTLRLASSYIAHLRQLLQEDRYENGYVHPVN-LTWP 181
>FB|FBgn0263118 [details] [associations]
symbol:tx "taxi" species:7227 "Drosophila melanogaster"
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IC;ISS] [GO:0070888 "E-box
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0016203 "muscle attachment"
evidence=IEP;TAS] [GO:0043425 "bHLH transcription factor binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0007525 "somatic muscle
development" evidence=TAS] [GO:0007498 "mesoderm development"
evidence=IEP] [GO:0033627 "cell adhesion mediated by integrin"
evidence=IMP] [GO:0007474 "imaginal disc-derived wing vein
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
GO:GO:0007498 GO:GO:0003677 GO:GO:0007474 GO:GO:0016203
GO:GO:0000981 GO:GO:0033627 GO:GO:0046982 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0007525 KO:K09104 EMBL:L33401 EMBL:AY051581
EMBL:BT003640 PIR:A56066 RefSeq:NP_524516.2 UniGene:Dm.20759
UniGene:Dm.7724 ProteinModelPortal:P41894 SMR:P41894 IntAct:P41894
MINT:MINT-332545 STRING:P41894 EnsemblMetazoa:FBtr0085009
GeneID:43190 KEGG:dme:Dmel_CG5441 UCSC:CG5441-RA CTD:43190
FlyBase:FBgn0008649 eggNOG:NOG289751 InParanoid:P41894 OMA:QPSACIS
OrthoDB:EOG41VHJZ PhylomeDB:P41894 GenomeRNAi:43190 NextBio:832637
Bgee:P41894 GermOnline:CG5441 GO:GO:0043425 Uniprot:P41894
Length = 384
Score = 104 (41.7 bits), Expect = 0.00087, P = 0.00087
Identities = 35/92 (38%), Positives = 47/92 (51%)
Query: 58 SRFQDPTHSGAMGSLQPLAKKNRQGKTVRLNINARERRRMHDLNDALDELRAVIPYA--- 114
SR PT S PL+K R KT NARER RM ++N A + LR +P A
Sbjct: 76 SRKNAPTKSKTKAP--PLSKYRR--KTA----NARERTRMREINTAFETLRHCVPEAIKG 127
Query: 115 --HSPSVRKLSKIATLLLAKNYILMQANALEE 144
+ + KL+KI TL LA YI M +++ +
Sbjct: 128 EDAANTNEKLTKITTLRLAMKYITMLTDSIRD 159
>MGI|MGI:96891 [details] [associations]
symbol:Lyl1 "lymphoblastomic leukemia 1" species:10090 "Mus
musculus" [GO:0001955 "blood vessel maturation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0030183 "B cell differentiation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:96891 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 GO:GO:0001955 GO:GO:0030183
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH466525 GO:GO:0060216
GeneTree:ENSGT00690000101643 EMBL:AC145556 CTD:4066
eggNOG:NOG307510 HOGENOM:HOG000113414 HOVERGEN:HBG094957 KO:K15604
OMA:QVEEVGH OrthoDB:EOG4GF3GD EMBL:X57687 EMBL:X55055 EMBL:CT010167
EMBL:AK076114 EMBL:BC005736 IPI:IPI00321712 PIR:S16678
RefSeq:NP_032561.2 UniGene:Mm.4925 ProteinModelPortal:P27792
SMR:P27792 STRING:P27792 PhosphoSite:P27792 PRIDE:P27792
Ensembl:ENSMUST00000037165 GeneID:17095 KEGG:mmu:17095
UCSC:uc009mnb.1 InParanoid:Q4FK84 NextBio:291236 Bgee:P27792
CleanEx:MM_LYL1 Genevestigator:P27792 GermOnline:ENSMUSG00000034041
Uniprot:P27792
Length = 278
Score = 102 (41.0 bits), Expect = 0.00091, P = 0.00091
Identities = 37/102 (36%), Positives = 50/102 (49%)
Query: 51 PEHLSHNSRFQD-PTHSGAMGSLQPLAKKNRQGKTVR-LNINARERRRMHDLNDALDELR 108
P + NSR + P+HS L LA ++ K R + N+RER R +N A ELR
Sbjct: 119 PFSIFPNSRLKRRPSHS----ELD-LADGHQPQKVARRVFTNSRERWRQQHVNGAFAELR 173
Query: 109 AVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEELRRIIT 150
++P H P RKLSK L LA YI L + ++T
Sbjct: 174 KLLP-THPPD-RKLSKNEVLRLAMKYIGFLVRLLRDQTAVLT 213
>WB|WBGene00001957 [details] [associations]
symbol:hlh-13 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0008286 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0040011 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0043054 EMBL:AF369899 EMBL:FO080925 PIR:T29241
RefSeq:NP_508725.1 ProteinModelPortal:Q20561 SMR:Q20561
IntAct:Q20561 EnsemblMetazoa:F48D6.3 GeneID:185980
KEGG:cel:CELE_F48D6.3 UCSC:F48D6.3 CTD:185980 WormBase:F48D6.3
eggNOG:NOG257763 HOGENOM:HOG000020270 InParanoid:Q20561 OMA:LAMAYIN
NextBio:930208 Uniprot:Q20561
Length = 147
Score = 87 (35.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 29/68 (42%), Positives = 35/68 (51%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R + RER+RM +N A ELR IP P ++LSKI TL LA YI M + L
Sbjct: 43 RQTASIRERKRMCSINVAFIELRNYIPTF--PYEKRLSKIDTLNLAIAYINMLDDVLRTP 100
Query: 146 RRIITYIQ 153
YIQ
Sbjct: 101 EDSGQYIQ 108
Score = 36 (17.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1 MDSNSGSYYSNETSQ 15
MDS+ SYY E +
Sbjct: 28 MDSSYDSYYCEEPEE 42
>UNIPROTKB|Q20561 [details] [associations]
symbol:hlh-13 "Helix-loop-helix protein 13" species:6239
"Caenorhabditis elegans" [GO:0043054 "dauer exit" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=IPI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0008286 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0040011 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00680000099574
GO:GO:0043054 EMBL:AF369899 EMBL:FO080925 PIR:T29241
RefSeq:NP_508725.1 ProteinModelPortal:Q20561 SMR:Q20561
IntAct:Q20561 EnsemblMetazoa:F48D6.3 GeneID:185980
KEGG:cel:CELE_F48D6.3 UCSC:F48D6.3 CTD:185980 WormBase:F48D6.3
eggNOG:NOG257763 HOGENOM:HOG000020270 InParanoid:Q20561 OMA:LAMAYIN
NextBio:930208 Uniprot:Q20561
Length = 147
Score = 87 (35.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 29/68 (42%), Positives = 35/68 (51%)
Query: 86 RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQANALEEL 145
R + RER+RM +N A ELR IP P ++LSKI TL LA YI M + L
Sbjct: 43 RQTASIRERKRMCSINVAFIELRNYIPTF--PYEKRLSKIDTLNLAIAYINMLDDVLRTP 100
Query: 146 RRIITYIQ 153
YIQ
Sbjct: 101 EDSGQYIQ 108
Score = 36 (17.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1 MDSNSGSYYSNETSQ 15
MDS+ SYY E +
Sbjct: 28 MDSSYDSYYCEEPEE 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 158 0.00085 106 3 11 22 0.37 32
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 237
No. of states in DFA: 551 (59 KB)
Total size of DFA: 127 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.73u 0.09s 14.82t Elapsed: 00:00:10
Total cpu time: 14.75u 0.09s 14.84t Elapsed: 00:00:10
Start: Thu Aug 15 11:57:05 2013 End: Thu Aug 15 11:57:15 2013
WARNINGS ISSUED: 1