BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5919
(387 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189234256|ref|XP_001811647.1| PREDICTED: similar to DNA polymerase zeta catalytic subunit
[Tribolium castaneum]
gi|270002615|gb|EEZ99062.1| hypothetical protein TcasGA2_TC004938 [Tribolium castaneum]
Length = 1518
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 129/208 (62%), Gaps = 5/208 (2%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
I++S+ R I +VP IR+FG+ EG+K C+ VHGVFPYLYIP+ ++ Q+AAS
Sbjct: 25 IMYSDFRGSSISQVPTIRIFGSTAEGQKICLHVHGVFPYLYIPYDGSEDCNSLKYQIAAS 84
Query: 134 IDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
IDKALN++ G ++ QHV+ I++ P YGYH E F KI LY P + K+ ++L +
Sbjct: 85 IDKALNVSFGQASALTQHVYKITLVSGIPFYGYHTREHQFFKIYLYNPNLIRKVGNMLQS 144
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+ +QP+ESHIPYILQF IDYNL+GMS I N +KFR DS K S+ QLEAD
Sbjct: 145 EVIHGRLYQPHESHIPYILQFMIDYNLHGMSRILLNDLKFRDDSH----KQSYSQLEADT 200
Query: 253 KAESIVVDMAANDSDVATSGGITRYLSD 280
E+I+ + D + + GI D
Sbjct: 201 LCENILNRLEIADGKMGVNPGIAALWED 228
>gi|443719045|gb|ELU09366.1| hypothetical protein CAPTEDRAFT_106116 [Capitella teleta]
Length = 349
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM-LQQLAA 132
+ HSE R+ + +VPV+R+FG G+KTC+ VHG+FPYLY+P H P+ T LQQ AA
Sbjct: 25 VCHSEFRSTPVYRVPVLRIFGATPAGQKTCMHVHGIFPYLYVP-HDGPLPTTRYLQQFAA 83
Query: 133 SIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLL 191
S+DKALNIAL +S QHV+ I++ PMYGYHA+E+ FLKI LY P + K+ DLLL
Sbjct: 84 SLDKALNIALNRANSPAQHVYKIAVVAGIPMYGYHAEEQAFLKIFLYNPNMVKKVADLLL 143
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
GAV N FQP+ESHIPY Q IDYNLYGM+ + VKFR
Sbjct: 144 GGAVMNRAFQPHESHIPYHQQVFIDYNLYGMNLLHTAAVKFR 185
>gi|307187392|gb|EFN72515.1| DNA polymerase zeta catalytic subunit [Camponotus floridanus]
Length = 2051
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 147/282 (52%), Gaps = 36/282 (12%)
Query: 65 FHHEPITE-TIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
+ PI E + SE R I+KVP+IR+FG+ V GKKTC+ +HGVFPY+Y+P + T
Sbjct: 12 YQASPIPELDVTFSEFRGSEIRKVPIIRIFGSTVTGKKTCLHIHGVFPYMYVPCTIQENT 71
Query: 124 ETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
++ QLAASID ALN + G S QHV+ I P YGYH E F KI Y P
Sbjct: 72 DSYAYQLAASIDSALNKSFGSTLSTNQHVYKIQRVSGIPFYGYHEKEHLFFKIYFYNPAI 131
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--------S 234
+ + DLL NGA+ N+ QPYE+HIPYILQF IDYNLYGM+ I N +K+R
Sbjct: 132 IKRTADLLQNGAILNQTLQPYEAHIPYILQFMIDYNLYGMNLINLNNIKYRCSLQECTTE 191
Query: 235 DSE---------------TSLPKLSHCQLEADVKAESIVVDMAANDSDVATSG------- 272
DS+ TS+ + S C+LE D A I+ N+ G
Sbjct: 192 DSQNKSSMDLINPQMYLPTSVMRQSMCELEVDAHASDILNKQNVNEKLELNPGLAAIWDE 251
Query: 273 GITRYLSDVLLNSMRAILLGQEPHLLM----DPDVYSMQDLL 310
R + L N+ +L + P+ ++ D D+Y LL
Sbjct: 252 EKARRAAVGLENAKSQLLYPKTPNKIILSPTDNDIYQKNQLL 293
>gi|390338524|ref|XP_786092.3| PREDICTED: uncharacterized protein LOC580974 [Strongylocentrotus
purpuratus]
Length = 3741
Score = 182 bits (462), Expect = 2e-43, Method: Composition-based stats.
Identities = 93/197 (47%), Positives = 123/197 (62%), Gaps = 5/197 (2%)
Query: 65 FHHEPITE-TIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
+ PI + + SE R +++VPVIRVFG+ G+KTC+ VHGVFPY+YIP+ T
Sbjct: 12 YQAPPIEDLDVTFSEFRGSEVRQVPVIRVFGSTPSGQKTCLHVHGVFPYIYIPYDGSQPT 71
Query: 124 ETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
+ L Q+A+S+D AL +A G S VQHVF IS+ P+YGYH ER F+KI Y P
Sbjct: 72 DRYLHQMASSLDTALQVAQGKGSSTVQHVFKISLVSGIPLYGYHKSERQFMKIYFYNPAV 131
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE---TS 239
+ +LL NGAV N+ FQP+ESH+P+ LQF IDYNLYGM+ + VKFR E +S
Sbjct: 132 RRRAVELLQNGAVMNKIFQPHESHVPFNLQFLIDYNLYGMNMLNLAAVKFRRPEEATDSS 191
Query: 240 LPKLSHCQLEADVKAES 256
KLS + +A S
Sbjct: 192 NQKLSSPKPSTSFQATS 208
>gi|332027078|gb|EGI67174.1| DNA polymerase zeta catalytic subunit [Acromyrmex echinatior]
Length = 1974
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 155/346 (44%), Gaps = 89/346 (25%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ +V ID + S PI D SE R I+KVPVIR FG+ GKKTC+ +HGVFPY
Sbjct: 1 MFSITLVNIDSYQSSPIPELDVTFSEFRGSEIKKVPVIRAFGSTATGKKTCLHIHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P C + Y Y
Sbjct: 61 LYVP--------------------------------------CTVQENMDSYAY------ 76
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
QLAA+ID ALN + G S QHV+ I P YGYH E F KI Y
Sbjct: 77 --------QLAAAIDSALNTSFGSTLSTNQHVYKIQRVSGIPFYGYHEKEHLFFKIYFYN 128
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----- 234
P + + DLL NG + N+ QPYE+HIPYILQF IDYNLYGM+ I N VK+R
Sbjct: 129 PAIIKRTADLLQNGVILNQTLQPYEAHIPYILQFMIDYNLYGMNLINLNSVKYRHSLQGC 188
Query: 235 --------------DSETSLP----KLSHCQLEADVKAESIVVDMAAND--------SDV 268
DSE LP + S C+LEADV A I+ + ++ + +
Sbjct: 189 ATEDSQNRSSMDFLDSEAYLPISITRQSMCELEADVYASEILNRQSVSEKLKLNPGLAAI 248
Query: 269 ATSGGITRYLSDVLLNSMRAILLGQEPHLLMDP----DVYSMQDLL 310
R +D L N+ +L + P ++ P DVY LL
Sbjct: 249 WNEEKARRAETD-LENAKSQLLYPKTPSKIILPPTTNDVYQKDQLL 293
>gi|170055192|ref|XP_001863472.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
gi|167875216|gb|EDS38599.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
Length = 1959
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 136/259 (52%), Gaps = 51/259 (19%)
Query: 3 SMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLY 62
S IV++D +M KP FD +SE R +++VPV+R+FG+ +G +CV +HGVFPYLY
Sbjct: 9 SFRIVSVDHYMHKPEPRFDSCYSEFRGSDVRQVPVVRLFGSTADGTHSCVHIHGVFPYLY 68
Query: 63 IPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI 122
+P+ V
Sbjct: 69 VPYDGASADSLAV----------------------------------------------- 81
Query: 123 TETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
+ ++ Q+A S+DKA+N++LG +S HVF I++ K P+YGYH E F KI LY PY
Sbjct: 82 -DRLMYQIAGSLDKAINVSLGNANSAATHVFRIALVKGIPIYGYHRKEHQFFKIFLYNPY 140
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSETS 239
+ K +LL+NG + + FQ YE+H+PYILQF IDYNLYGMS N+ V+ R D E
Sbjct: 141 FIRKATNLLMNGVIMSRVFQTYETHVPYILQFFIDYNLYGMSLMNVPTAAVQERGDGEGQ 200
Query: 240 LPKLSHCQLEADVKAESIV 258
L K+S + E D+ A I+
Sbjct: 201 LAKMSTSEYEVDILAVDIL 219
>gi|326676933|ref|XP_002665692.2| PREDICTED: DNA polymerase zeta catalytic subunit [Danio rerio]
Length = 1615
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 130/240 (54%), Gaps = 52/240 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++MS PI D +SE R ++KVPV+R+FG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMSSPIRELDVCYSEFRESDVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+Y+P+ FG
Sbjct: 61 IYVPYDG-------------------------FGQEA----------------------- 72
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ L+Q+A SID+ALNI++G S VQH+F + + P YGYH E++F+KI LY
Sbjct: 73 ---DRYLRQVAYSIDRALNISMGNPSSNVQHIFKVVLVTGMPFYGYHMREKSFMKIFLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL GAV N+ FQP+E+HIP++LQ IDYNLYGM+ I VKFR T+
Sbjct: 130 PQMVKRVSELLQAGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMISLAAVKFRKSRATA 189
>gi|383864467|ref|XP_003707700.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Megachile
rotundata]
Length = 1647
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 137/279 (49%), Gaps = 73/279 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+++VT+D + S PI D SE R I+ VPV+R+FG+ G KTC+ +HGVFPY
Sbjct: 1 MFSISLVTLDSYQSTPIPELDVTFSEFRGTEIKYVPVVRIFGSTPSGTKTCLHIHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+YIP C+ + V ++Y
Sbjct: 61 IYIP--------------------------------------CIINNNVDSFMY------ 76
Query: 121 PITETMLQQLAASIDKALNIALGYK-DSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+LAA+ID +N++LG + QHV+ I P+YGYH E F KI Y
Sbjct: 77 --------KLAAAIDSGINVSLGSAVSNTQHVYKIQRISGIPLYGYHEKEHLFFKIYFYN 128
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR------ 233
P + + DLL NG + N+ FQP+E+HIP+ILQF IDYNLYGMS I VKFR
Sbjct: 129 PAMIKRAADLLQNGTILNQSFQPHEAHIPFILQFMIDYNLYGMSLINLKHVKFRHSMHTE 188
Query: 234 ----------SDSETSLP----KLSHCQLEADVKAESIV 258
SDS+ LP + S C LE D ++ I+
Sbjct: 189 SKESESFLSLSDSQKYLPVSVMRQSTCTLEVDAQSTEIL 227
>gi|307203010|gb|EFN82226.1| DNA polymerase zeta catalytic subunit [Harpegnathos saltator]
Length = 1867
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 122/218 (55%), Gaps = 24/218 (11%)
Query: 65 FHHEPITE-TIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
+ PI E + SE R I KVPVIR+FG+ GKKTC+ VHGVFPY+Y+P +
Sbjct: 12 YQASPIPEFDVTFSEFRGSEINKVPVIRIFGSTAIGKKTCLHVHGVFPYIYVPCTVQENM 71
Query: 124 ETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
++ QLAASID ALN + G S QHV+ I P YGYH + F KI Y P
Sbjct: 72 DSFAYQLAASIDSALNTSFGSTLSTNQHVYKIQRVSGIPFYGYHEKKHLFFKIYFYNPAI 131
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-------- 234
+ ++ DLL NG V N+ FQ YE+HIPYILQF IDYNLYGM+ I N +K+R
Sbjct: 132 IKRITDLLQNGVVLNQHFQSYEAHIPYILQFMIDYNLYGMNVINLNNIKYRRSLQGTTEE 191
Query: 235 ----------DSETSLP----KLSHCQLEADVKAESIV 258
DS+ LP + S C+LE D A I+
Sbjct: 192 SQNKSSMDTLDSQIYLPVTVVRQSMCELEVDTHAADIL 229
>gi|157124378|ref|XP_001660448.1| DNA polymerase zeta catalytic subunit [Aedes aegypti]
gi|108874011|gb|EAT38236.1| AAEL009851-PA [Aedes aegypti]
Length = 2080
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 142/261 (54%), Gaps = 53/261 (20%)
Query: 3 SMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLY 62
S+ IV++D +M KP FD +SE R +++VPVIR+FG+ +G +CV +HGVFPYLY
Sbjct: 11 SIRIVSVDHYMHKPEPRFDTCYSEFRGSNVKQVPVIRLFGSTADGTHSCVHIHGVFPYLY 70
Query: 63 IPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI 122
+PF GN + +T V
Sbjct: 71 VPFD---------------------------GNTAD--RTAV------------------ 83
Query: 123 TETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
+ ++ Q+A+S+DKA+N++LG +S HVF I++ K P+YGYH E F KI +Y PY
Sbjct: 84 -DRLMYQIASSLDKAINVSLGNANSAATHVFRIALVKGIPIYGYHRKEHQFFKIYMYNPY 142
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS-- 239
+ K +LL+NG + + FQ +ESH+PYILQF IDYNLYGMS ++ R +ET
Sbjct: 143 LIRKANNLLMNGVILSRVFQTFESHVPYILQFFIDYNLYGMSLLDVLESAIRPRTETGEE 202
Query: 240 --LPKLSHCQLEADVKAESIV 258
L K+S + E D+ A I+
Sbjct: 203 GHLQKMSTSEYEIDILAGDIL 223
>gi|195120055|ref|XP_002004544.1| GI19991 [Drosophila mojavensis]
gi|193909612|gb|EDW08479.1| GI19991 [Drosophila mojavensis]
Length = 2251
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 127/240 (52%), Gaps = 53/240 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP+ DP +SELR I++VP++R+FG N G+K C+ VHGVFPY
Sbjct: 7 IYSVRLVIADFYMEKPVFGLDPCYSELRGKEIKRVPIVRIFGANANGQKCCMHVHGVFPY 66
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP+ ET+
Sbjct: 67 FYIPYDKRDF-ETV---------------------------------------------- 79
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
E + Q+A +DKA+NI+LG S QHVF I + K P YGYH E F KI ++
Sbjct: 80 ---ERGILQIAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRTEHQFFKIFMFN 136
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
P + + +LL +GA+ N F P+ESH+PYILQF IDYNLYGMS ++ +VKFR +E
Sbjct: 137 PRFVRRAANLLQSGAILNRNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRRQTE 196
>gi|296484157|tpg|DAA26272.1| TPA: DNA-directed DNA polymerase delta 1-like [Bos taurus]
Length = 3133
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 129/242 (53%), Gaps = 52/242 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+R+FG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSVVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR S
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARRKS 189
Query: 240 LP 241
P
Sbjct: 190 DP 191
>gi|329663970|ref|NP_001193101.1| DNA polymerase zeta catalytic subunit [Bos taurus]
Length = 3133
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 129/242 (53%), Gaps = 52/242 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+R+FG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSVVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR S
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARRKS 189
Query: 240 LP 241
P
Sbjct: 190 DP 191
>gi|348531132|ref|XP_003453064.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oreochromis
niloticus]
Length = 3036
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 147/287 (51%), Gaps = 61/287 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MF++ IVT D++++ PI D +SE R ++KVPV+R+FG+ G+KTC+ +HGVFPY
Sbjct: 1 MFAVRIVTADYYLTSPIKDLDVCYSEFRESDVKKVPVVRIFGSTPAGQKTCLHLHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+Y+P+ + +G P Y
Sbjct: 61 IYVPYDN---------------------------------------YGQQPERY------ 75
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
L+Q+A SID+ALN+A+G S QHVF + + P YGYHA E+ F+KI LY
Sbjct: 76 ------LRQVAFSIDRALNVAMGNPTSNNQHVFKVVLVSGMPYYGYHAKEKLFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL +GAV N+ +QP+E HIPY+LQ IDYNLYGM+ + VKFRS +
Sbjct: 130 PQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLVNLAAVKFRSSQKKG 189
Query: 240 LPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSM 286
+ + I NDS + G R+ + + +S+
Sbjct: 190 -------SASSSISPWKIPCTSKLNDSTIG--GTFVRWEENAIPSSL 227
>gi|194863706|ref|XP_001970573.1| GG23303 [Drosophila erecta]
gi|190662440|gb|EDV59632.1| GG23303 [Drosophila erecta]
Length = 1920
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 154/311 (49%), Gaps = 72/311 (23%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ +V DF+M KP DP +SELR I++VPVIRVFG N G+KTC+ VHGVFPY
Sbjct: 11 IFSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP+ N+ E C+
Sbjct: 71 FYIPYDK---------------------------NDFE----CL---------------- 83
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
E + Q+A +DKA+NI+LG S QHVF I + K P YGYH E FLKI ++
Sbjct: 84 ---ERGILQMAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRMEHQFLKIYMFN 140
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRS--D 235
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ ++KFR D
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRSHD 200
Query: 236 SET---------------SLPKLSHCQLEADVKAESIV--VDMAANDSDVATSGGITRYL 278
E S+ K++ LE DV + I+ + A T+ GI
Sbjct: 201 DEVIPYANVKPAQLLDIISVKKVACSALEVDVSSNFILNRFQLVAKSKSSQTNPGIEAIW 260
Query: 279 SDVLLNSMRAI 289
+D L + +
Sbjct: 261 NDEKLRREKLV 271
>gi|195430028|ref|XP_002063059.1| GK21718 [Drosophila willistoni]
gi|194159144|gb|EDW74045.1| GK21718 [Drosophila willistoni]
Length = 2028
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 131/239 (54%), Gaps = 53/239 (22%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
+S+ +V DF+M KPI DP +SELR I+KVP++R+FG N G+KTC+ +HGVFPY
Sbjct: 16 YSIRLVIADFYMEKPIFGLDPCYSELRGKEIKKVPIVRIFGGNSLGQKTCMHIHGVFPYF 75
Query: 62 YIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP 121
YIP+ R F E
Sbjct: 76 YIPYDK-----------------------RDF--------------------------ES 86
Query: 122 ITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEP 180
+ +LQ +A S+DKA+NI+LG S+ QHVF I + K P YGYH E +LKI ++ P
Sbjct: 87 LERGILQ-IAMSLDKAINISLGQGSSMAQHVFKIQLVKGIPFYGYHRREHQYLKIFMFNP 145
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
+ + +LL +GA+ + F P+ESH+PYILQF IDYNLYGMS +I +VKFR +E
Sbjct: 146 RFVRRAANLLQSGAILGKNFCPHESHVPYILQFMIDYNLYGMSYVHIPLEVVKFRRKNE 204
>gi|350412206|ref|XP_003489571.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
impatiens]
Length = 2056
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 158/342 (46%), Gaps = 96/342 (28%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+N+VT+D + S P+ D S+ R I++VPVIR+FG+ G KTC+ +HGVFPY
Sbjct: 1 MFSINLVTLDSYQSIPLLGVDVTFSDFRGNEIRQVPVIRIFGSTPSGTKTCLHIHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+YIP C V Y+Y
Sbjct: 61 MYIP--------------------------------------CTINDNVNSYMY------ 76
Query: 121 PITETMLQQLAASIDKALNIALGYK-DSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+LAA+ID A+N++LG + QHV+ I P YGYH E FLKI Y
Sbjct: 77 --------KLAAAIDSAINVSLGSAISNTQHVYKIQQVSGIPFYGYHEKEHLFLKIYFYN 128
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----- 234
P + + DLL NG +F + QP+E+HIP+ILQF IDYNLYGMS I VKFR
Sbjct: 129 PAMIKRAADLLQNGVIFGQSLQPHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQCIHTK 188
Query: 235 --------------DSETSLP----KLSHCQLEADVKAESIVVDMAANDSDVATSGGITR 276
DS+ LP K S C+LE D +A I+ N ++
Sbjct: 189 LEENSENESPLNLFDSQKYLPAFIVKQSTCKLEVDAQACEIL-----NRQEIQ------- 236
Query: 277 YLSDVLLNSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALY 318
+D+ LN A + +E H +DL +V+S LY
Sbjct: 237 --NDLDLNPGIAAIWNEERHR------REAKDLENVESQFLY 270
>gi|198456440|ref|XP_001360325.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
gi|198135615|gb|EAL24900.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
Length = 2075
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 163/320 (50%), Gaps = 63/320 (19%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP + DP +SELR I++VP+IRVFG N G+KTC+ VHGVFPY
Sbjct: 10 VYSIRLVIADFYMEKPQSGLDPCYSELRGKEIKRVPIIRVFGANSAGQKTCMHVHGVFPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP+ + E
Sbjct: 70 FYIPYDKK-------------------------------------------------DFE 80
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ +LQ +A +DKALNI+LG S QHVF I + K P YGYH + FLKI ++
Sbjct: 81 SLERGILQ-IAMHLDKALNISLGQGSSNAQHVFKIQLVKGIPFYGYHRVDHQFLKIYMFN 139
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ +VKFR E
Sbjct: 140 PRFVRRAANLLQSGAILSKNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRRSHE 199
Query: 238 TSLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAILLGQEPHL 297
+ + + E ++ S V MA + +V S S+ +LN + + G+ H
Sbjct: 200 DEVVPYPNVKPEQLLETSS-VKKMACSSLEVDVS-------SNFILNRFQLVAKGKGSH- 250
Query: 298 LMDPDVYSMQDLLDVKSGAL 317
+P + ++ + +V+ L
Sbjct: 251 -TNPGIEAIWNDENVRRQKL 269
>gi|195149658|ref|XP_002015773.1| GL10839 [Drosophila persimilis]
gi|194109620|gb|EDW31663.1| GL10839 [Drosophila persimilis]
Length = 2075
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 163/320 (50%), Gaps = 63/320 (19%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP + DP +SELR I++VP+IRVFG N G+KTC+ VHGVFPY
Sbjct: 10 VYSIRLVIADFYMEKPQSGLDPCYSELRGKEIKRVPIIRVFGANSAGQKTCMHVHGVFPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP+ + E
Sbjct: 70 FYIPYDKKDF-------------------------------------------------E 80
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ +LQ +A +DKALNI+LG S QHVF I + K P YGYH + FLKI ++
Sbjct: 81 SLERGILQ-IAMHLDKALNISLGQGSSNAQHVFKIQLVKGIPFYGYHRVDHQFLKIYMFN 139
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ +VKFR E
Sbjct: 140 PRFVRRAANLLQSGAILSKNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFRRSHE 199
Query: 238 TSLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAILLGQEPHL 297
+ + + E ++ S V MA + +V S S+ +LN + + G+ H
Sbjct: 200 DEVVPYPNVKPEQLLETSS-VKKMACSSLEVDVS-------SNFILNRFQLVAKGKGSH- 250
Query: 298 LMDPDVYSMQDLLDVKSGAL 317
+P + ++ + +V+ L
Sbjct: 251 -TNPGIEAIWNDENVRRQKL 269
>gi|312378971|gb|EFR25391.1| hypothetical protein AND_09279 [Anopheles darlingi]
Length = 1235
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 140/259 (54%), Gaps = 52/259 (20%)
Query: 3 SMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLY 62
S+ IV++DF+++KP FD SE R I++VPV+R+FG+N G +CV +HGVFPY Y
Sbjct: 9 SIRIVSVDFYLAKPDPQFDVCRSEFRGTEIKQVPVVRLFGSNSAGVHSCVHIHGVFPYFY 68
Query: 63 IPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI 122
+P+ EG + V G Y
Sbjct: 69 VPY--------------------------------EGSVSDRLVVGQRIY---------- 86
Query: 123 TETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
QLA ++DKALN++L +S HVF+IS+ K P+YGYH E FLKI L+ P
Sbjct: 87 ------QLATALDKALNVSLAQANSRTTHVFNISLVKGIPIYGYHKQEHHFLKIYLFNPL 140
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSETS 239
+ K LL+NGA+ + +Q E+H+PYILQF IDYNLYGMS N+E ++ R D ++
Sbjct: 141 LVRKATQLLMNGAILSTTYQVLETHVPYILQFFIDYNLYGMSFLNLESKGLRQRKD-DSE 199
Query: 240 LPKLSHCQLEADVKAESIV 258
PK+S + E D A +I+
Sbjct: 200 PPKMSTSEYEIDALATAIL 218
>gi|11096177|gb|AAG30223.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
Length = 2130
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 129/238 (54%), Gaps = 53/238 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP DP +SELR I++VPVIRVFG N G+KTC+ VHGVFPY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP+ + E
Sbjct: 71 LYIPYDKKDF-------------------------------------------------E 81
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ +LQ +A +DKA+NI+LG S QHVF I + K P YGYH E FLKI ++
Sbjct: 82 SLERGILQ-MAVHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFN 140
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSD 235
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ ++KFR +
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRN 198
>gi|195332241|ref|XP_002032807.1| GM20982 [Drosophila sechellia]
gi|194124777|gb|EDW46820.1| GM20982 [Drosophila sechellia]
Length = 2127
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 153/311 (49%), Gaps = 72/311 (23%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP DP +SELR I++VPVIRVFG N G+KTC+ VHGVFPY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP+ + E
Sbjct: 71 LYIPYDKKDF-------------------------------------------------E 81
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ +LQ +A +DKA+NI+LG S QHVF I + K P YGYH E FLKI ++
Sbjct: 82 SLERGILQ-MAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFN 140
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ ++KFR +
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRSHD 200
Query: 238 -----------------TSLPKLSHCQLEADVKAESIV--VDMAANDSDVATSGGITRYL 278
T+ K++ LE DV + I+ + A T+ GI
Sbjct: 201 DDVIPYANVKPAQLLDITTAKKVACSALEVDVSSNFILNRFQLVAKSKSNHTNPGIESIW 260
Query: 279 SDVLLNSMRAI 289
+D L ++ +
Sbjct: 261 NDEKLRRLKLV 271
>gi|24586371|ref|NP_524881.2| mutagen-sensitive 205 [Drosophila melanogaster]
gi|11096179|gb|AAG30224.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
gi|21627721|gb|AAF59191.2| mutagen-sensitive 205 [Drosophila melanogaster]
Length = 2130
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 129/238 (54%), Gaps = 53/238 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP DP +SELR I++VPVIRVFG N G+KTC+ VHGVFPY
Sbjct: 11 VYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPY 70
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP+ + E
Sbjct: 71 LYIPYDKKDF-------------------------------------------------E 81
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ +LQ +A +DKA+NI+LG S QHVF I + K P YGYH E FLKI ++
Sbjct: 82 SLERGILQ-MAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFN 140
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSD 235
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ ++KFR +
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRN 198
>gi|340727622|ref|XP_003402139.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
terrestris]
Length = 1635
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 136/282 (48%), Gaps = 76/282 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+N+VT+D + S P+ D S+ R I++VPVIR+FG+ G KTC+ +HGVFPY
Sbjct: 1 MFSINLVTLDSYQSIPLLGVDVTFSDFRGNEIRQVPVIRIFGSTPSGTKTCLHIHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+YIP C + V Y+Y
Sbjct: 61 MYIP--------------------------------------CTINNNVNSYMY------ 76
Query: 121 PITETMLQQLAASIDKALNIALGYK-DSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+LAA+ID A+N++LG + QHV+ I P YGYH E FLKI Y
Sbjct: 77 --------KLAAAIDSAINVSLGSAISNTQHVYKIQQVSGIPFYGYHEKEHLFLKIYFYN 128
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----- 234
P + + DLL NG + + QP+E+HIP+ILQF IDYNLYGMS I VKFR
Sbjct: 129 PAMIKRAADLLQNGVILGQSLQPHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQCIHTK 188
Query: 235 --------------DSETSLP----KLSHCQLEADVKAESIV 258
DS+ LP K S C+LE D +A I+
Sbjct: 189 LEENSENESSSNLFDSQKHLPAFIVKQSTCKLEVDAQACEIL 230
>gi|402868560|ref|XP_003898364.1| PREDICTED: DNA polymerase zeta catalytic subunit [Papio anubis]
Length = 3066
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 131/237 (55%), Gaps = 58/237 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D TC
Sbjct: 1 MFSVRIVTADYYMASPLQGLD----------------------------TC--------- 23
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
P+T+T V +KVPV+R+FG G+KTC+ +HG+FPYLY+P+
Sbjct: 24 ------QSPLTQTPV---------KKVPVVRIFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|328780807|ref|XP_003249865.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis
mellifera]
Length = 1633
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 138/280 (49%), Gaps = 74/280 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+N+V +D + S P++ D S+ R I++VP+IR+FG+ + G KTC+ VHGVFPY
Sbjct: 1 MFSINLVVLDSYQSTPLSELDVTFSDFRGNEIRQVPIIRIFGSTLSGIKTCLHVHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+YIP C + V ++Y
Sbjct: 61 IYIP--------------------------------------CTINNNVDSFMY------ 76
Query: 121 PITETMLQQLAASIDKALNIALGYK-DSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+LAA ID A+NI+LG ++QHV+ I P+YGYH + F KI Y
Sbjct: 77 --------KLAAGIDSAINISLGSAMSNIQHVYKIQQVYGIPLYGYHEKKHLFFKIYFYN 128
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----- 234
P + + DLL NG V N+ QP+E+HIP+ILQF IDYNLYGMS I VKFR
Sbjct: 129 PAIIKRAADLLQNGMVLNQTLQPHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQYTHMK 188
Query: 235 ------------DSETSLP----KLSHCQLEADVKAESIV 258
DS+ LP K + C+LE D +A I+
Sbjct: 189 ENSQNENSLNSFDSQKYLPSSVLKQTTCKLEVDAQASEIL 228
>gi|195380071|ref|XP_002048794.1| GJ21240 [Drosophila virilis]
gi|194143591|gb|EDW59987.1| GJ21240 [Drosophila virilis]
Length = 2044
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 127/236 (53%), Gaps = 53/236 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP+ DP +SELR I++VP++R+FG N G+K C+ VHGVFPY
Sbjct: 7 IYSVRLVIADFYMEKPVFGLDPCYSELRGKEIKRVPIVRIFGANANGQKCCMHVHGVFPY 66
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP+ R F +VE G+
Sbjct: 67 FYIPYDR-----------------------RDF-ESVE--------RGIL---------- 84
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
Q+A +DKA+NI+LG S QHVF I + K P YGYH E F KI ++
Sbjct: 85 --------QIAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRTEHQFFKIFMFN 136
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFR 233
P + + +LL +GA+ + F P+ESH+PYILQF IDYNLYGMS ++ +VKFR
Sbjct: 137 PRFVRRAANLLQSGAILSRNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEVVKFR 192
>gi|380028350|ref|XP_003697867.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis florea]
Length = 1818
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 137/280 (48%), Gaps = 74/280 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+N+V +D + S P+ D S+ R I++VPVIR+FG+ + G KTC+ VHGVFPY
Sbjct: 1 MFSINLVILDSYQSTPLPELDVTFSDFRGNEIRQVPVIRIFGSTLSGIKTCLHVHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+YIP C + V ++Y
Sbjct: 61 IYIP--------------------------------------CTVNNNVDSFMY------ 76
Query: 121 PITETMLQQLAASIDKALNIALGYK-DSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+LAA ID A+NI+LG ++QHV+ I P+YGYH + F KI Y
Sbjct: 77 --------KLAAGIDSAINISLGSAMSNIQHVYKIQQVYGIPLYGYHEKKHLFFKIYFYN 128
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----- 234
P + + DLL NG V N+ QP+E+HIP+ILQF IDYNLYGMS I VKFR
Sbjct: 129 PAMVKRAADLLQNGMVLNQSLQPHEAHIPFILQFMIDYNLYGMSLINLKDVKFRQYTHMK 188
Query: 235 ------------DSETSLP----KLSHCQLEADVKAESIV 258
DS+ LP K + C+LE D +A I+
Sbjct: 189 ENSQNENSLNLFDSQKYLPASVLKQTTCKLEVDAQASEIL 228
>gi|432945567|ref|XP_004083662.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oryzias
latipes]
Length = 2967
Score = 169 bits (429), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/169 (47%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 69 PITE-TIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH--EPITET 125
PI + + +S R +++VPV+R+FG G+KTC+ +HG+FPY+Y+P+ +P E
Sbjct: 16 PIKDLDVSYSSFRESDVKRVPVVRIFGATPAGQKTCLHLHGIFPYIYVPYDGCGQP-PER 74
Query: 126 MLQQLAASIDKALNIALGY-KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
L+Q+A SID+ALN+A+G SVQHVF + + P YG+HA E+ F+KI LY P +
Sbjct: 75 HLRQVAFSIDRALNVAMGNPASSVQHVFKVVLVSGMPFYGFHAKEKHFMKIYLYNPQMVK 134
Query: 185 KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
++ +LL +GAV N+ +QP+E HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 135 RVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
M S+ IVT D++++ PI D +S R +++VPV+R+FG G+KTC+ +HG+FPY
Sbjct: 1 MLSVRIVTADYYLASPIKDLDVSYSSFRESDVKRVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPF 65
+Y+P+
Sbjct: 61 IYVPY 65
>gi|194755285|ref|XP_001959922.1| GF13111 [Drosophila ananassae]
gi|190621220|gb|EDV36744.1| GF13111 [Drosophila ananassae]
Length = 2124
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 129/240 (53%), Gaps = 53/240 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V DF+M KP DP +SELR I++VPV+RVFG N G+KTC+ VHGVFPY
Sbjct: 11 VYSVRLVIADFYMEKPQFGLDPCYSELRGKEIKRVPVVRVFGANSSGQKTCMHVHGVFPY 70
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP+ + E
Sbjct: 71 FYIPYDKK-------------------------------------------------DFE 81
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ +LQ +A +DKA+NI+LG S QHVF I + K P YGYH E FLKI ++
Sbjct: 82 SLERGILQ-MAIHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFN 140
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
P + + +LL +GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ ++KFR +E
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYLHVPMEVLKFRRSNE 200
>gi|297291939|ref|XP_001086055.2| PREDICTED: DNA polymerase zeta catalytic subunit [Macaca mulatta]
Length = 3064
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 155/302 (51%), Gaps = 77/302 (25%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D TC
Sbjct: 1 MFSVRIVTADYYMASPLQGLD----------------------------TC--------- 23
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
P+T+ V +KVPV+R+FG G+KTC+ +HG+FPYLY+P+
Sbjct: 24 ------QSPLTQAPV---------KKVPVVRIFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR--- 183
Query: 237 ETSLPKLSHCQLEADVKAESIVVDMAAND--SDVATSGGITRYLSDVLLNSMRAILLGQE 294
+A K+ ++ + + S + +G + R+ D + +S+ IL G E
Sbjct: 184 ------------KARRKSNTLYATGSCKNHLSRNSLAGTLFRWEQDEIPSSL--ILEGVE 229
Query: 295 PH 296
P
Sbjct: 230 PQ 231
>gi|195474494|ref|XP_002089526.1| GE19149 [Drosophila yakuba]
gi|194175627|gb|EDW89238.1| GE19149 [Drosophila yakuba]
Length = 2007
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 111/167 (66%), Gaps = 5/167 (2%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT--ETMLQQLAAS 133
+SELR I++VPVIRVFG N G+KTC+ VHGVFPY YIP+ E + Q+A
Sbjct: 34 YSELRGKEIKRVPVIRVFGGNSRGQKTCMHVHGVFPYFYIPYDKRDFECLERGILQIAMH 93
Query: 134 IDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
+DKA+NI+LG S QHVF I + K P YGYH E FLKI ++ P + + +LL +
Sbjct: 94 LDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRVEHQFLKIYMFNPRFVRRAANLLQS 153
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSE 237
GA+ ++ F P+ESH+PYILQF IDYNLYGMS ++ ++KFR E
Sbjct: 154 GAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRSHE 200
>gi|357617710|gb|EHJ70950.1| putative DNA polymerase zeta catalytic subunit [Danaus plexippus]
Length = 1646
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 119/188 (63%), Gaps = 6/188 (3%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
+++SE R I++VPV+RVFG + G+K C+ +HGVFPY YIP L Q+AAS
Sbjct: 40 VIYSEFRGSDIKQVPVLRVFGPSPGGQKACLHIHGVFPYFYIPCPEANPQPQFLYQIAAS 99
Query: 134 IDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
+DKALNIAL S QHV+ IS+ K P YGYH E FLKI LY P + + +L N
Sbjct: 100 LDKALNIALKQATSANQHVYKISVVKGLPFYGYHDKEHLFLKIFLYNPGLIKQAVELCCN 159
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR---SDSETSLPKLSHCQLE 249
GAV + FQP+E+H+ + LQF ID+NL+GMS I+ VK+R S + P +SH
Sbjct: 160 GAVLGQAFQPHEAHLNFTLQFFIDFNLFGMSYIDVQTVKYRKTGSSQHSDEPVVSHDNF- 218
Query: 250 ADVKAESI 257
D+KAESI
Sbjct: 219 -DLKAESI 225
>gi|195027904|ref|XP_001986822.1| GH20319 [Drosophila grimshawi]
gi|193902822|gb|EDW01689.1| GH20319 [Drosophila grimshawi]
Length = 2215
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 127/239 (53%), Gaps = 59/239 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
++S+ +V +DF+M KP+ DP +
Sbjct: 7 IYSLRLVVVDFYMEKPVFGLDPCY------------------------------------ 30
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH- 119
SELR I++VP++R+FG N +G+K+C+ VHGVFPY YIP+
Sbjct: 31 ----------------SELRGKEIKRVPIVRIFGANAKGQKSCMHVHGVFPYFYIPYDKR 74
Query: 120 --EPITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKIL 176
E + +LQ +A +DKA+NI+LG S QHVF I + K P YGYH E F KI
Sbjct: 75 DFESVERGILQ-IAMHLDKAINISLGQGSSNAQHVFKIQLVKGIPFYGYHRGEHQFFKIY 133
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS--NIEFNMVKFR 233
++ P + + +LL +GA+ + F P+ESH+PYILQF IDYNLYGMS ++ +VKFR
Sbjct: 134 MFNPRFVRRAANLLQSGAILSRNFNPHESHVPYILQFMIDYNLYGMSYLHVPLEIVKFR 192
>gi|410928855|ref|XP_003977815.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Takifugu
rubripes]
Length = 2944
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MF++ +VT D++++ P+ D +SE R ++KVPV+R+FG G+KTC+ +HG+FPY
Sbjct: 1 MFAVRVVTADYYLASPVKDLDVCYSEFRESNVKKVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+Y+P Y ++ +
Sbjct: 61 IYVP-------------------------------------------------YDGYNQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGY-KDSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E ++ +A SID+ALN+ +G S QH+F +++ P YGYHA E+ F+KI LY
Sbjct: 72 P--ERYMRLVAFSIDRALNVTMGNPSSSAQHIFKVALVSGMPFYGYHAKEKLFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ DLL +GAV N+ +QP+E HIPY+LQ IDYNLYGM+ + VKFR
Sbjct: 130 PQMVKRVCDLLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLLNLAAVKFR 183
>gi|148672985|gb|EDL04932.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Mus musculus]
Length = 3090
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 108/153 (70%), Gaps = 6/153 (3%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIA 141
+KVPV+RVFG G+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+A
Sbjct: 1 KKVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVA 58
Query: 142 LGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
LG S QHVF +S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +
Sbjct: 59 LGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKCY 118
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 119 QPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 151
>gi|196017073|ref|XP_002118383.1| hypothetical protein TRIADDRAFT_34124 [Trichoplax adhaerens]
gi|190579013|gb|EDV19122.1| hypothetical protein TRIADDRAFT_34124 [Trichoplax adhaerens]
Length = 240
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 131/250 (52%), Gaps = 65/250 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS IV DF+++KPI D +S+ R ++VPV+R+FG G+KTC+ VHGVFPY
Sbjct: 1 MFSSRIVAADFYLAKPIQKLDACYSDFRRCPTKRVPVVRIFGATPAGQKTCLHVHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P+ G P
Sbjct: 61 LYVPY-----------------------------------------DGSLP--------- 70
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQH---------VFHISICKKFPMYGYHADERT 171
L + A SIDKA+++A G K + Q VF I+I PMYGY+ +E+
Sbjct: 71 --VSKYLLEFANSIDKAIHVATGVKSTDQDTSNMAWQQVVFKIAIVNGMPMYGYYNEEKQ 128
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
F+KI LY P + K+ +LLL GA+ N+ FQP+ESHIP+ILQF IDYNLYGM+ I+ +VK
Sbjct: 129 FMKIYLYNPNLVGKVAELLLAGAIMNKVFQPHESHIPFILQFFIDYNLYGMNLIKLAVVK 188
Query: 232 FRS----DSE 237
FR+ DSE
Sbjct: 189 FRAPLNEDSE 198
>gi|328718109|ref|XP_001949189.2| PREDICTED: DNA polymerase zeta catalytic subunit-like
[Acyrthosiphon pisum]
Length = 1485
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 5/188 (2%)
Query: 75 VHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH--HEPITETMLQQLAA 132
++SE I KVPV+RVFG G+K C+ VHGVFPY++IP +E + +L
Sbjct: 29 LYSEFWGTQILKVPVLRVFGCTPNGEKCCLHVHGVFPYIFIPLEESYETKNQEILYNFGN 88
Query: 133 SIDKALNIALGYKDSVQHVFH--ISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL 190
S+DKAL++A+G +S H I++C K YGYH + FLKIL Y PY DLL
Sbjct: 89 SLDKALSLAIGSTNSKSKHIHNIITVCGK-SFYGYHTENTKFLKILFYNPYSAKIAVDLL 147
Query: 191 LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
NGAV N FQP+E+HIPY LQF IDYNL+GM+ I+ + VK+R+ E L K+S C E
Sbjct: 148 QNGAVCNTIFQPHEAHIPYHLQFMIDYNLHGMNYIKLSAVKYRNSVEQGLSKMSRCTNEM 207
Query: 251 DVKAESIV 258
DV+A I+
Sbjct: 208 DVQAIQIL 215
>gi|156386842|ref|XP_001634120.1| predicted protein [Nematostella vectensis]
gi|156221199|gb|EDO42057.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
+ +S R IQKVP++R+FG +G+KTC VHG FPY+Y+P+ + L+Q A S
Sbjct: 22 LTYSSFRESKIQKVPLVRIFGATKQGQKTCAHVHGAFPYIYVPYDGTEPRDKYLRQFATS 81
Query: 134 IDKALNIALGY-KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
+D A++++LG S HV+ ISI K P YGYH +E F+KI Y P+ ++++ +LL +
Sbjct: 82 VDFAVHVSLGRASSSTHHVYDISIIKGRPFYGYHEEETEFIKISFYNPFLVNRVVELLQS 141
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
GA+ N+ FQP+E+HIPY+LQF +DYNLYGM+ + + VKFR
Sbjct: 142 GAIMNKTFQPHEAHIPYLLQFFMDYNLYGMNFLNASSVKFR 182
>gi|196017077|ref|XP_002118385.1| hypothetical protein TRIADDRAFT_34129 [Trichoplax adhaerens]
gi|190579015|gb|EDV19124.1| hypothetical protein TRIADDRAFT_34129 [Trichoplax adhaerens]
Length = 230
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 125/240 (52%), Gaps = 59/240 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ I TIDF+MS+P+ D
Sbjct: 1 MFSIRIFTIDFYMSRPVPKLD--------------------------------------- 21
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+ +S R +++VP++RVFG G+K C+ +HGVFPYLY+P+
Sbjct: 22 -------------VCYSPFRKTSVKRVPILRVFGPTPAGQKACLHIHGVFPYLYVPYDGS 68
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-------QHVFHISICKKFPMYGYHADERTFL 173
+ L++ A SIDKA+N ++ ++ Q VF IS+ PMYGY+ R FL
Sbjct: 69 QPVDKYLEEFALSIDKAINASMSESNAASSNSWHQQTVFKISLVNGVPMYGYNPSPRPFL 128
Query: 174 KILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
KI +Y P + K+ DLLL GAV N+ FQP+E+H+P+ LQF IDYNLYGM+ I+ N VKFR
Sbjct: 129 KIYIYNPNLVGKIADLLLTGAVMNKVFQPHEAHLPFTLQFFIDYNLYGMNWIKLNAVKFR 188
>gi|47211849|emb|CAF94397.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 128/241 (53%), Gaps = 52/241 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MF++ +VT D++++ P+ D +SE R ++ VPV+R+FG G+KTC+ +HG+FPY
Sbjct: 1 MFAVRVVTADYYLASPVKDLDVCYSEFRESNVKTVPVVRIFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+Y+P Y + +
Sbjct: 61 IYVP-------------------------------------------------YDGYTQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGY-KDSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E ++ +A SID+ALN+ +G S QH+F +++ P YGYHA E+ F+KI LY
Sbjct: 72 P--ERYMRLVAFSIDRALNVTMGNPASSAQHIFKVALVSGKPFYGYHAKEKLFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ DLL +GAV N+ +QPYE HIP++LQ IDYNLYGM+ + VKFR +
Sbjct: 130 PQMVKRVCDLLQSGAVMNKSYQPYEGHIPFLLQLFIDYNLYGMNLLNLAAVKFRRKRKMG 189
Query: 240 L 240
+
Sbjct: 190 M 190
>gi|260823504|ref|XP_002604223.1| hypothetical protein BRAFLDRAFT_211074 [Branchiostoma floridae]
gi|229289548|gb|EEN60234.1| hypothetical protein BRAFLDRAFT_211074 [Branchiostoma floridae]
Length = 222
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 128/228 (56%), Gaps = 19/228 (8%)
Query: 99 GKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISIC 157
G+KTC+ +HGVFPY+Y+P+ P +E L+Q A+SID+ALN+ALG S QHVF IS+
Sbjct: 2 GQKTCLHLHGVFPYVYVPYDGPPESERHLRQFASSIDRALNVALGRASSTTQHVFKISLV 61
Query: 158 KKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDY 217
P YGYH E+ F+KI Y P + K DLL GAV N+ +QP+E+HIP++LQF IDY
Sbjct: 62 SGTPYYGYHEKEQQFMKIYFYNPLMVKKAVDLLQGGAVMNKPYQPHEAHIPFLLQFFIDY 121
Query: 218 NLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRY 277
NLYGM+ I VKFR E E V+ + + ++ S + T+ G+
Sbjct: 122 NLYGMNYINLGAVKFRRPKE-----------EGKVEDYCVKIYHFSSSSKIGTNPGLAAI 170
Query: 278 LSDVLLNSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLV 325
D R +G+ + P Q+ DV+ L+L++ +
Sbjct: 171 WED---EKQRRREMGESSQIEPPPS----QERPDVQPTESDLELRERI 211
>gi|347965478|ref|XP_003435770.1| AGAP013386-PA [Anopheles gambiae str. PEST]
gi|333470492|gb|EGK97643.1| AGAP013386-PA [Anopheles gambiae str. PEST]
Length = 2191
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 145/303 (47%), Gaps = 58/303 (19%)
Query: 4 MNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+ IV++D +MSKP FD +SE R +++VPVIR+FG+N EG +CV +HGVFPY Y+
Sbjct: 10 IRIVSVDHYMSKPDPQFDTCYSEFRGAEVKQVPVIRLFGSNAEGTHSCVHIHGVFPYFYV 69
Query: 64 PFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
P+ S L + K
Sbjct: 70 PYD---------GSVADRLAVDK------------------------------------- 83
Query: 124 ETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
+ QLA ++DK +N+ LG S +H+F I + K P+YGYH + + KI +Y PY
Sbjct: 84 --KIYQLAGALDKGINVMLGRASSQAKHIFKIVLVKGIPIYGYHRNPHHYFKIYMYNPYL 141
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR---SDSETS 239
+ LL+NG + + +Q +E+HIPYILQF IDYNLYGMS +E + R D E
Sbjct: 142 VRNATQLLMNGTILSGSYQVHETHIPYILQFFIDYNLYGMSFLELDSKGLRQRTGDVEGD 201
Query: 240 L---PKLSHCQLEADVKAESIVVDMAANDSDVA-TSGGITRYLSDVLLNSMRAILLGQEP 295
PK++ + E D A I+ D + GI D + RA+L ++P
Sbjct: 202 RNIPPKMTTSEYEIDALASDILNREPDGKEDGEFANPGIASIWKDE--QARRALLGLEQP 259
Query: 296 HLL 298
+
Sbjct: 260 ERM 262
>gi|291396775|ref|XP_002714966.1| PREDICTED: DNA polymerase zeta [Oryctolagus cuniculus]
Length = 3128
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 129/240 (53%), Gaps = 52/240 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR S
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKSRRKS 189
>gi|431838720|gb|ELK00650.1| DNA polymerase zeta catalytic subunit [Pteropus alecto]
Length = 3129
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 129/242 (53%), Gaps = 52/242 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLSQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P+ +G P
Sbjct: 61 LYVPYDG---------------------------------------YGQHP--------- 72
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 73 ---ESYLSQMAFSIDRALNVALGSPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR S
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKAKRKS 189
Query: 240 LP 241
P
Sbjct: 190 DP 191
>gi|153792012|ref|NP_002903.3| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|143811385|sp|O60673.2|DPOLZ_HUMAN RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
Short=hREV3
gi|225000508|gb|AAI72423.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast)
[synthetic construct]
Length = 3130
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|5107941|gb|AAD40184.1|AF157476_1 DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3063675|gb|AAC24357.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3243260|gb|AAC24009.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|119568679|gb|EAW48294.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast),
isoform CRA_c [Homo sapiens]
Length = 3130
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|397503273|ref|XP_003822253.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Pan
paniscus]
Length = 3130
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|27371127|gb|AAH35823.1| Similar to REV3-like, catalytic subunit of DNA polymerase zeta
RAD54 like (S. cerevisiae), partial [Homo sapiens]
Length = 608
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|410225886|gb|JAA10162.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan
troglodytes]
gi|410267062|gb|JAA21497.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan
troglodytes]
gi|410306870|gb|JAA32035.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan
troglodytes]
gi|410353579|gb|JAA43393.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan
troglodytes]
Length = 3130
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|410041139|ref|XP_003950950.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic
subunit [Pan troglodytes]
Length = 3130
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|345482629|ref|XP_001607949.2| PREDICTED: DNA polymerase zeta catalytic subunit [Nasonia
vitripennis]
Length = 2007
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 143/287 (49%), Gaps = 43/287 (14%)
Query: 65 FHHEPITET-IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
+ PI E S+ R I++VPV+R+FG G+K C+ +HGVFPYLY+P+ +
Sbjct: 12 YQATPIPEVDPTFSQFRGSDIKQVPVLRIFGTTQNGEKVCLHIHGVFPYLYVPYSGQIKA 71
Query: 124 ETMLQQLAASIDKALNIALGY-KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
+ + +LAA++D A+NI+LG K + QHV+ + P YGYH F KI Y P
Sbjct: 72 DILAYRLAAALDTAINISLGSAKANTQHVYKVHQVSGIPFYGYHRKNHHFFKIYFYNPAM 131
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--------- 233
+ + DLL NG + ++ FQP+E+HIP+ +QF IDYN+YGMS I VK R
Sbjct: 132 IKRATDLLQNGCILDQVFQPHEAHIPFTMQFMIDYNIYGMSMINLRNVKHRHSATVSQTE 191
Query: 234 ----------SDSET--------SLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGIT 275
SD E+ S+ K S C+LE D A S +++ D + + GI
Sbjct: 192 EKLSNNSNNLSDFESEVKEYLPYSVKKQSVCKLEIDAWA-SDILNREVIDKGMDLNPGID 250
Query: 276 RYLSDVLLNSMRAILLG-------------QEPHLLMDPDVYSMQDL 309
+ +A L+G Q +L D D+Y + L
Sbjct: 251 AIWEEEKARRAQAGLVGESQLTHPSSPERSQAARILTDNDIYHQKRL 297
>gi|301789010|ref|XP_002929922.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Ailuropoda
melanoleuca]
Length = 3129
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 149/297 (50%), Gaps = 67/297 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRVFGATPCGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P Y + +
Sbjct: 61 LYVP-------------------------------------------------YDGYGQQ 71
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 72 P--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR S
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARRKS 189
Query: 240 LPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAILLGQEPH 296
P + + + S+ +G + R+ D + +S+ IL G EP
Sbjct: 190 DPLHTTGSCKDRLPGSSL-------------TGTLFRWEEDEIPSSL--ILEGVEPQ 231
>gi|395816788|ref|XP_003781872.1| PREDICTED: DNA polymerase zeta catalytic subunit [Otolemur
garnettii]
Length = 3076
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 101/145 (69%), Gaps = 6/145 (4%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV- 148
FG G+KTC+ +HG+FPYLY+P+ H+P E+ L Q+A SID+ALN+ALG S
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPYDGYGHQP--ESYLSQMAFSIDRALNVALGNPSSTA 98
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIP 208
QHVF +S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIP
Sbjct: 99 QHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIP 158
Query: 209 YILQFCIDYNLYGMSNIEFNMVKFR 233
Y+LQ IDYNLYGM+ I VKFR
Sbjct: 159 YLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|449668904|ref|XP_004206894.1| PREDICTED: uncharacterized protein LOC100213595 [Hydra
magnipapillata]
Length = 2098
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 108/169 (63%), Gaps = 7/169 (4%)
Query: 77 SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE-TMLQQLAASID 135
SE R I VPVIR+FG G+K+C+ +H +FPYLY+P ++ A S+D
Sbjct: 27 SEFRQTAIYHVPVIRIFGTTPLGQKSCLHIHQIFPYLYVPLPAGVDNGLRFCKEFAMSLD 86
Query: 136 KALNIALGYKDSVQ--HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
AL I+ G S Q HVF + I KK P YGY+ +E+ FL++ LY P H+S DLL+NG
Sbjct: 87 SALTISFGKSVSQQRQHVFKVEIVKKIPFYGYYKNEKDFLQVYLYNPNHVSVAGDLLING 146
Query: 194 AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK 242
+V N+ FQP+E+HIP+ILQF IDYNL+GM+ I + V FR T LPK
Sbjct: 147 SVMNQFFQPFETHIPFILQFFIDYNLHGMNFINLSSVLFR----TPLPK 191
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
FS+ I+ ++M KPI D SE R I VPVIR+FG G+K+C+ +H +FPYL
Sbjct: 4 FSLRIIDASYYMEKPIQGLDFCFSEFRQTAIYHVPVIRIFGTTPLGQKSCLHIHQIFPYL 63
Query: 62 YIPF 65
Y+P
Sbjct: 64 YVPL 67
>gi|145312253|ref|NP_001077435.1| DNA polymerase zeta catalytic subunit [Rattus norvegicus]
Length = 3132
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 126/234 (53%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG G+KTC+ +HGVFPY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDICQSPLTQHPVKKVPVVRVFGATPAGQKTCLHLHGVFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P+ +G P Y
Sbjct: 61 LYVPYDG---------------------------------------YGQQPERY------ 75
Query: 121 PITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYE 179
L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY
Sbjct: 76 ------LSQMALSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 130 PAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|350578363|ref|XP_003480351.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sus scrofa]
Length = 1024
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 94 GNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-Q 149
G EG+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S Q
Sbjct: 38 GVGSEGQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGKPSSTAQ 95
Query: 150 HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPY 209
HVF +S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY
Sbjct: 96 HVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPY 155
Query: 210 ILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAANDSDVA 269
+LQ IDYNLYGM+ I VKFR S P ++A D +
Sbjct: 156 LLQLFIDYNLYGMNLINLAAVKFRKARRKSDP----------LRATGSCKDRLPGKNSF- 204
Query: 270 TSGGITRYLSDVLLNSMRAILLGQEPH 296
+G + R+ D + +S+ IL G EP
Sbjct: 205 -TGTLFRWEDDEIPSSL--ILEGVEPQ 228
>gi|410959876|ref|XP_003986524.1| PREDICTED: DNA polymerase zeta catalytic subunit [Felis catus]
Length = 3077
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 25/205 (12%)
Query: 98 EGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFH 153
EG+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF
Sbjct: 63 EGQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFK 120
Query: 154 ISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQF 213
+S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 121 VSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQL 180
Query: 214 CIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAANDSDVATS-- 271
IDYNLYGM+ I VKFR +A K++S+ + D S
Sbjct: 181 FIDYNLYGMNLINLAAVKFR---------------KARRKSDSMRTTGSCKDQLPGNSLT 225
Query: 272 GGITRYLSDVLLNSMRAILLGQEPH 296
G + R+ D + +S+ IL G EP
Sbjct: 226 GTLFRWEEDEIPSSL--ILEGVEPR 248
>gi|380805253|gb|AFE74502.1| DNA polymerase zeta catalytic subunit, partial [Macaca mulatta]
Length = 453
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 25/212 (11%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDS 147
R+FG G+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S
Sbjct: 1 RIFGATPAGQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSS 58
Query: 148 V-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
QHVF +S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+H
Sbjct: 59 TAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAH 118
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND- 265
IPY+LQ IDYNLYGM+ I VKFR +A K+ ++ + +
Sbjct: 119 IPYLLQLFIDYNLYGMNLINLAAVKFR---------------KARRKSNTLYATGSCKNH 163
Query: 266 -SDVATSGGITRYLSDVLLNSMRAILLGQEPH 296
S + +G + R+ D + +S+ IL G EP
Sbjct: 164 LSRNSLAGTLFRWEQDEIPSSL--ILEGVEPQ 193
>gi|4079831|gb|AAC98785.1| DNA polymerase zeta catalytic subunit [Mus musculus]
Length = 3122
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 129/237 (54%), Gaps = 58/237 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D TC
Sbjct: 1 MFSVRIVTADYYMASPLPGLD----------------------------TC--------- 23
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
S L L ++KVPV+RVFG G+KTC+ +HG+FPYLY+P+
Sbjct: 24 ---------------QSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|153792337|ref|NP_035394.2| DNA polymerase zeta catalytic subunit [Mus musculus]
gi|341940501|sp|Q61493.3|DPOLZ_MOUSE RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
AltName: Full=Seizure-related protein 4
Length = 3122
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 129/237 (54%), Gaps = 58/237 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D TC
Sbjct: 1 MFSVRIVTADYYMASPLPGLD----------------------------TC--------- 23
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
S L L ++KVPV+RVFG G+KTC+ +HG+FPYLY+P+
Sbjct: 24 ---------------QSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|296199021|ref|XP_002747079.1| PREDICTED: DNA polymerase zeta catalytic subunit [Callithrix
jacchus]
Length = 3127
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 127/237 (53%), Gaps = 58/237 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D TC
Sbjct: 1 MFSVRIVTADYYMASPLQGLD----------------------------TC--------- 23
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
P+T+T V V+RVFG G+KTC+ +HG+FPYLY+P+
Sbjct: 24 ------QSPLTQTPVKKVP---------VVRVFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|170055190|ref|XP_001863471.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
gi|167875215|gb|EDS38598.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
Length = 184
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 9/179 (5%)
Query: 46 EGKKTCVFVHGVFPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVF 105
+G T + V Y++ P EP ++ +SE R +++VPV+R+FG+ +G +CV
Sbjct: 4 DGSVTSFRIVSVDHYMHKP---EPRFDS-CYSEFRGSDVRQVPVVRLFGSTADGTHSCVH 59
Query: 106 VHGVFPYLYIPFHHEPI----TETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKF 160
+HGVFPYLY+P+ + ++ Q+A S+DKA+N++LG +S HVF I++ K
Sbjct: 60 IHGVFPYLYVPYDGASADSLAVDRLMYQIAGSLDKAINVSLGNANSAATHVFRIALVKGI 119
Query: 161 PMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNL 219
P+YGYH E F KI LY PY + K +LL+NG + + FQ YE+H+PYILQF IDYNL
Sbjct: 120 PIYGYHRKEHQFFKIFLYNPYFIRKATNLLMNGVIMSRVFQTYETHVPYILQFFIDYNL 178
>gi|334324484|ref|XP_003340527.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic
subunit-like [Monodelphis domestica]
Length = 3156
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 52/234 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S ++KVPV+RVFG G+KTC+ +HG+FPY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPFTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P+ C G P Y
Sbjct: 61 LYVPYD-----------------------------------GC----GQQPERY------ 75
Query: 121 PITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYE 179
L+Q+A SID+ALN+ALG S VQHVF +S+ P YGYH ER F+KI LY
Sbjct: 76 ------LRQMAFSIDRALNVALGNPSSTVQHVFKVSLVSGMPFYGYHEKERHFMKIYLYN 129
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I V+FR
Sbjct: 130 PAMVKRICELLQSGAIMNKYYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVRFR 183
>gi|322795808|gb|EFZ18487.1| hypothetical protein SINV_12915 [Solenopsis invicta]
Length = 1861
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 106/191 (55%), Gaps = 24/191 (12%)
Query: 99 GKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISIC 157
GKKTC+ +HGVFPY+Y+P + T++ QLAA+ID ALN + G S QHV+ I
Sbjct: 1 GKKTCLHIHGVFPYMYVPCTVQENTDSHAYQLAAAIDSALNTSFGSALSTNQHVYKIQRV 60
Query: 158 KKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDY 217
P YGYH E F KI Y P + + DLL NG + N+ QPYE+HIPYI+QF IDY
Sbjct: 61 SGIPFYGYHEKEHLFFKIYFYNPAIIKRTADLLQNGVILNQTLQPYEAHIPYIMQFMIDY 120
Query: 218 NLYGMSNIEFNMVKFRSDSE-----------------------TSLPKLSHCQLEADVKA 254
NLYGM+ I N VK+R S+ +S+ + S C+LE DV A
Sbjct: 121 NLYGMNLINLNSVKYRQLSQGCITEDSQSKSSMDLLDLPEYLPSSVTRQSMCELEVDVHA 180
Query: 255 ESIVVDMAAND 265
I+ N+
Sbjct: 181 SEILNRQGVNE 191
>gi|351697832|gb|EHB00751.1| DNA polymerase zeta catalytic subunit [Heterocephalus glaber]
Length = 3119
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 129/237 (54%), Gaps = 58/237 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT+D++M+ P+ D
Sbjct: 1 MFSVRIVTVDYYMASPLQGLD--------------------------------------- 21
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
I S L + ++KVPV+RVFG G+KTC+ +HG+FPYLY+P+
Sbjct: 22 -------------ICQSPLTQVPVKKVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|395534778|ref|XP_003769414.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sarcophilus
harrisii]
Length = 3136
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%), Gaps = 6/170 (3%)
Query: 68 EPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITE 124
E I E + E +L ++ I EG+KTC+ +HG+FPYLY+P+ +P E
Sbjct: 2 EGIREAFLEEEDFDLSFKERGGIHQAKVGKEGQKTCLHLHGIFPYLYVPYDGCGQQP--E 59
Query: 125 TMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHM 183
L+Q+A SID+ALN+ALG S VQHVF +S+ P YGYH ER F+KI LY P +
Sbjct: 60 RYLRQMAFSIDRALNVALGNPSSTVQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMV 119
Query: 184 SKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I V+FR
Sbjct: 120 KRICELLQSGAIMNKYYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVRFR 169
>gi|281347901|gb|EFB23485.1| hypothetical protein PANDA_020229 [Ailuropoda melanoleuca]
Length = 3134
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 149/300 (49%), Gaps = 68/300 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D S L ++KVPV+RVFG H P
Sbjct: 1 MFSVRIVTADYYMASPLQGLDICQSPLTQAPVKKVPVVRVFG---------ATAHAAGPR 51
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
+KTC+ +HG+FPYLY+P+
Sbjct: 52 C--------------------------------------QKTCLHLHGIFPYLYVPYDGY 73
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI
Sbjct: 74 GQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 131
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 132 LYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKAR 191
Query: 237 ETSLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAILLGQEPH 296
S P + + + S+ +G + R+ D + +S+ IL G EP
Sbjct: 192 RKSDPLHTTGSCKDRLPGSSL-------------TGTLFRWEEDEIPSSL--ILEGVEPQ 236
>gi|363732318|ref|XP_426179.3| PREDICTED: DNA polymerase zeta catalytic subunit [Gallus gallus]
Length = 3154
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 6/142 (4%)
Query: 96 NVEGKKTCVFVHGVFPYLYIP---FHHEPITETMLQQLAASIDKALNIALGYKDS-VQHV 151
++ G+KTC+ +HGVFPYLY+P F P E L+Q+A SID+ALN+ALG S +QHV
Sbjct: 33 SIPGQKTCLHLHGVFPYLYVPYDGFGQHP--EHYLRQVAFSIDRALNVALGNPSSTIQHV 90
Query: 152 FHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYIL 211
F +S+ P YGYH ER F+KI LY P + ++ +LL GA+ N+ +QP+E+HIPY+L
Sbjct: 91 FKVSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLL 150
Query: 212 QFCIDYNLYGMSNIEFNMVKFR 233
Q IDYNLYGM+ I VKFR
Sbjct: 151 QLFIDYNLYGMNLINLAAVKFR 172
>gi|432107870|gb|ELK32927.1| DNA polymerase zeta catalytic subunit [Myotis davidii]
Length = 3123
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
G+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 6 GQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGTPSSTTQHVFKV 63
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 64 SLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLF 123
Query: 215 IDYNLYGMSNIEFNMVKFRSDSETSLP 241
IDYNLYGM+ I VKFR S P
Sbjct: 124 IDYNLYGMNLINLAAVKFRKARRKSDP 150
>gi|6978946|dbj|BAA90768.1| DNA polymerase [Mus musculus]
Length = 3122
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 128/237 (54%), Gaps = 58/237 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT D++M+ P+ D TC
Sbjct: 1 MFSVRIVTADYYMASPLPGLD----------------------------TC--------- 23
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-- 118
S L L ++KVPV+RVFG G+KTC+ +HG+FPYLY+P+
Sbjct: 24 ---------------QSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPYLYVPYDGY 68
Query: 119 -HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKIL 176
+P E+ L Q+A SID+ALN+AL S QHVF +S+ P YGYH ER F+KI
Sbjct: 69 GQQP--ESYLSQMAFSIDRALNVALANPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIY 126
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 127 LYNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|345778314|ref|XP_539084.3| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 3136
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 100/145 (68%), Gaps = 6/145 (4%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV- 148
FG G+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S
Sbjct: 41 FGATPAGQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTA 98
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIP 208
QHVF +S+ P YGYH E+ F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIP
Sbjct: 99 QHVFKVSLVSGMPFYGYHEKEKHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIP 158
Query: 209 YILQFCIDYNLYGMSNIEFNMVKFR 233
Y+LQ IDYNLYGM+ I VKFR
Sbjct: 159 YLLQLFIDYNLYGMNLINLAAVKFR 183
>gi|326916059|ref|XP_003204329.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Meleagris
gallopavo]
Length = 3126
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 106/158 (67%), Gaps = 9/158 (5%)
Query: 83 VIQKVPVIRVFGNNVE---GKKTCVFVHGVFPYLYIP---FHHEPITETMLQQLAASIDK 136
+ +K PV++ N+ + +KTC+ +HGVFPYLY+P F P E L+Q+A SID+
Sbjct: 48 LTEKQPVLQACQNSDDMNACQKTCLHLHGVFPYLYVPYDGFGQHP--EHYLRQVAFSIDR 105
Query: 137 ALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
ALN+ALG S +QHVF +S+ P YGYH ER F+KI LY P + ++ +LL GA+
Sbjct: 106 ALNVALGNPSSTIQHVFKVSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAI 165
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 166 MNKSYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 203
>gi|355748973|gb|EHH53456.1| hypothetical protein EGM_14100, partial [Macaca fascicularis]
Length = 3081
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 25/204 (12%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
G+KTC+ +HGVFPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 1 GQKTCLHLHGVFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKV 58
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 59 SLVSGMPFYGYHEKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQLF 118
Query: 215 IDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND--SDVATSG 272
IDYNLYGM+ I VKFR +A K+ ++ + + S + +G
Sbjct: 119 IDYNLYGMNLINLAAVKFR---------------KARRKSNTLYATGSCKNHLSRNSLAG 163
Query: 273 GITRYLSDVLLNSMRAILLGQEPH 296
+ R+ D + +S+ IL G EP
Sbjct: 164 TLFRWEQDEIPSSL--ILEGVEPQ 185
>gi|440910569|gb|ELR60356.1| DNA polymerase zeta catalytic subunit, partial [Bos grunniens
mutus]
Length = 3093
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 98/139 (70%), Gaps = 6/139 (4%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
G+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 1 GQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKV 58
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 59 SLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLF 118
Query: 215 IDYNLYGMSNIEFNMVKFR 233
IDYNLYGM+ I VKFR
Sbjct: 119 IDYNLYGMNLINLAAVKFR 137
>gi|242006490|ref|XP_002424083.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212507389|gb|EEB11345.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 2605
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 151/294 (51%), Gaps = 34/294 (11%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--HHEPITETMLQQLAASIDKALNIALGYK 145
PVIR+FG+ +G K+CV VHGV+PY+Y+P+ P + +L L A++D+ L I +
Sbjct: 35 PVIRIFGSTPDGVKSCVHVHGVYPYIYVPYIGGENPDRDALL--LYAALDETLKITFS-Q 91
Query: 146 DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
+ V+ +++ P YGYHA F KI LY P+++ K DLLL GA+ ++ QP+ES
Sbjct: 92 SKTKFVYKVTVVSGIPFYGYHASHHQFFKIFLYNPFYIKKASDLLLKGAILGQKLQPHES 151
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET---------------SLPKLSHCQLEA 250
HIPY LQF +DYN+YGMS + F+ VK+R + E + K + E
Sbjct: 152 HIPYTLQFMMDYNIYGMSFVNFSKVKYRRNPEKPDSLEGIDQTLVLSEKITKNTCSYFEL 211
Query: 251 DVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAILLGQEPHLLMDPDVYSMQDLL 310
DV A I+ A N+ + T+ G L +L N +P + S ++ +
Sbjct: 212 DVFASDII--NANNERGLQTNPG----LKAILENEKNRRRAQNKPSQFTVEESLSRKNDV 265
Query: 311 DVKSGALYL-----KLKDLVSACSIFRMRAILLGQEPHLLMDPDVYSMQDLLDV 359
+ A+Y KLK++ + I + A +L E MD + +LLD+
Sbjct: 266 VFPTEAMYRERLSGKLKEIKVSEGINLLEASVLKDE---RMDEPPEDLNNLLDL 316
>gi|449522574|ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
Length = 1591
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 122/235 (51%), Gaps = 48/235 (20%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++++ PI D +S + + +VPV+R++G+ G+KTCV VHGV PY
Sbjct: 10 VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPY 69
Query: 61 LYIPFHH--EPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
LY+P P+ + V E GNNV
Sbjct: 70 LYVPCSEILLPLNDKGVGGE-------------ALGNNV--------------------- 95
Query: 119 HEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLY 178
+ +++KAL + QHV ++ + +YGYH+ E F+KI LY
Sbjct: 96 ------------SLALEKALKLKGNSGSKRQHVHGYNLVRAKKLYGYHSSEELFIKIYLY 143
Query: 179 EPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P +++ +LLLNGAV + FQPYESHIP++LQF +DYNLYGM + +KFR
Sbjct: 144 YPQDITRAANLLLNGAVLEKSFQPYESHIPFVLQFLVDYNLYGMGLLHLVKLKFR 198
>gi|344264026|ref|XP_003404095.1| PREDICTED: DNA polymerase zeta catalytic subunit [Loxodonta
africana]
Length = 3158
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 25/204 (12%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 73 SQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKV 130
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GAV N+ +QP+E+HIPY+LQ
Sbjct: 131 SLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAVMNKFYQPHEAHIPYLLQLF 190
Query: 215 IDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAANDSDVATS--G 272
IDYNLYGM+ I VKFR +A K++++ + D S G
Sbjct: 191 IDYNLYGMNLINLAAVKFR---------------KARRKSDTMRATGSCKDQLPGNSLTG 235
Query: 273 GITRYLSDVLLNSMRAILLGQEPH 296
+ R+ D + +S+ IL G EP
Sbjct: 236 SLFRWEEDEIPSSL--ILEGIEPR 257
>gi|355562137|gb|EHH18769.1| hypothetical protein EGK_15435, partial [Macaca mulatta]
Length = 3081
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 25/204 (12%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
G+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 1 GQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKV 58
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 59 SLVSGMPFYGYHEKERHFMKIYLYNPAVVKRICELLQSGAIMNKFYQPHEAHIPYLLQLF 118
Query: 215 IDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND--SDVATSG 272
IDYNLYGM+ I VKFR +A K+ ++ + + S + +G
Sbjct: 119 IDYNLYGMNLINLAAVKFR---------------KARRKSNTLYATGSCKNHLSRNSLAG 163
Query: 273 GITRYLSDVLLNSMRAILLGQEPH 296
+ R+ D + +S+ IL G EP
Sbjct: 164 TLFRWEQDEIPSSL--ILEGVEPQ 185
>gi|449497906|ref|XP_002191467.2| PREDICTED: DNA polymerase zeta catalytic subunit [Taeniopygia
guttata]
Length = 3147
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 97/140 (69%), Gaps = 6/140 (4%)
Query: 98 EGKKTCVFVHGVFPYLYIP---FHHEPITETMLQQLAASIDKALNIALGYKDS-VQHVFH 153
+ +KTC+ +HG+FPYLY+P F P E L+Q+A SID+ALN+ALG S VQHVF
Sbjct: 31 KSQKTCLHLHGIFPYLYVPYDGFGQHP--ECYLRQVAFSIDRALNVALGNPSSTVQHVFK 88
Query: 154 ISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQF 213
+S+ P YGYH ER F+KI LY P + ++ +LL GA+ N+ +QP+E+HIPY+LQ
Sbjct: 89 VSLVSGMPFYGYHEKERQFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLLQL 148
Query: 214 CIDYNLYGMSNIEFNMVKFR 233
IDYNLYGM+ I VKFR
Sbjct: 149 FIDYNLYGMNLINLAAVKFR 168
>gi|426354275|ref|XP_004044593.1| PREDICTED: DNA polymerase zeta catalytic subunit [Gorilla gorilla
gorilla]
Length = 2921
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 97/139 (69%), Gaps = 6/139 (4%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 15 SQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKV 72
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 73 SLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLF 132
Query: 215 IDYNLYGMSNIEFNMVKFR 233
IDYNLYGM+ I VKFR
Sbjct: 133 IDYNLYGMNLINLAAVKFR 151
>gi|297678910|ref|XP_002817299.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic
subunit [Pongo abelii]
Length = 3081
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 97/139 (69%), Gaps = 6/139 (4%)
Query: 99 GKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSV-QHVFHI 154
+KTC+ +HG+FPYLY+P+ +P E+ L Q+A SID+ALN+ALG S QHVF +
Sbjct: 15 SQKTCLHLHGIFPYLYVPYDGYGQQP--ESYLSQMAFSIDRALNVALGNPSSTAQHVFKV 72
Query: 155 SICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFC 214
S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+ +QP+E+HIPY+LQ
Sbjct: 73 SLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLF 132
Query: 215 IDYNLYGMSNIEFNMVKFR 233
IDYNLYGM+ I VKFR
Sbjct: 133 IDYNLYGMNLINLAAVKFR 151
>gi|281427127|ref|NP_001163919.1| REV3-like, polymerase (DNA directed), zeta, catalytic subunit
[Xenopus laevis]
gi|262176857|gb|ACY27483.1| DNA polymerase zeta [Xenopus laevis]
Length = 3139
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 125/234 (53%), Gaps = 51/234 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ +VT D++++ P+ D S R+ +++VPV+RVFG G++ C+ +HG+FPY
Sbjct: 1 MFSLRLVTADYYLAAPLPGLDVTRSHFRDSPVRRVPVVRVFGATPAGQRACLHLHGIFPY 60
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY P+ +G +
Sbjct: 61 LYTPYDG-------------------------YG-----------------------QQD 72
Query: 121 PITETMLQQLAASIDKALNIALGY-KDSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
P E L+Q+A SID+ALN+ALG S QHVF I++ P YGYH E F+KI LY
Sbjct: 73 P--ERYLRQIAFSIDRALNVALGNPAASSQHVFKITVVSGVPFYGYHEKEIQFMKIYLYN 130
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + ++ +LL GAV N+ +QP+E+H+PY+LQ IDYNLYGM+ I VKFR
Sbjct: 131 PAMVKRVSELLQGGAVMNKCYQPHEAHVPYLLQLFIDYNLYGMNLINLAAVKFR 184
>gi|449454163|ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222413 [Cucumis sativus]
Length = 2868
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 48/235 (20%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++++ PI D +S + + +VPV+R++G+ G+KTCV VHGV PY
Sbjct: 10 VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPY 69
Query: 61 LYIPFHH--EPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
LY+P P+ + V E GNNV
Sbjct: 70 LYVPCSEILLPLNDKGVGGE-------------ALGNNV--------------------- 95
Query: 119 HEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLY 178
+ +++KAL + QHV ++ + +YGYH+ E F+KI LY
Sbjct: 96 ------------SLALEKALKLKGNSGSKRQHVHGYNLVRAKKLYGYHSSEEFFIKIYLY 143
Query: 179 EPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P +++ +LLLNGAV + QPYESHIP++LQF +DYNLYGM + +KFR
Sbjct: 144 YPQDITRAANLLLNGAVLEKSLQPYESHIPFVLQFLVDYNLYGMGLLHLVKLKFR 198
>gi|301615023|ref|XP_002936975.1| PREDICTED: DNA polymerase zeta catalytic subunit [Xenopus
(Silurana) tropicalis]
Length = 3130
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--HHEPITETMLQQLA 131
+ S R+ +++VPV+RVFG G++ C+ +HG+FPYLY P+ + + E L+Q+A
Sbjct: 22 VTRSHFRDGPVRRVPVVRVFGATPAGQRACLHLHGIFPYLYTPYDGYGQQDPERYLRQIA 81
Query: 132 ASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL 190
SID+ALN+ALG + QHVF I++ P YGYH ER F+KI LY P + ++ +LL
Sbjct: 82 FSIDRALNVALGNPSANSQHVFKITVVSGVPFYGYHEKERQFMKIYLYNPVMVKRVSELL 141
Query: 191 LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
GAV N+ +Q +E+H+PY+LQ IDYNLYGM+ I VKFR
Sbjct: 142 QGGAVMNKCYQSHEAHVPYLLQLFIDYNLYGMNLINLAAVKFR 184
>gi|295663052|ref|XP_002792079.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279254|gb|EEH34820.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1675
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 111/202 (54%), Gaps = 29/202 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIRVFG G+K C +HG FPYLYI + + T ++ L S+D AL ++
Sbjct: 39 KVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHMSVDHALAVSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+ + +V HI++ K P YGYH R FLKI L+ P HM++L DLL GAV
Sbjct: 99 RRNAYERKISYVAHITLVKGVPFYGYHVGYRFFLKIYLFNPMHMNRLADLLRQGAVMKRV 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD----SE------------------ 237
QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+ SE
Sbjct: 159 LQPYESHLQYLAQWMCDYNLYGCAYLKSSKVMFRAPIPIYSENLTHRWHDRSIPPGSVSD 218
Query: 238 -TSLPKLSHCQLEADVKAESIV 258
++LP+ SHC LE D+ + IV
Sbjct: 219 ISTLPRQSHCDLEVDIHVQDIV 240
>gi|320036527|gb|EFW18466.1| DNA polymerase zeta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1677
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 104/202 (51%), Gaps = 29/202 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE-PITETMLQQLAASIDKALNIAL-- 142
KVPVIRVFG G+K C +HG FPYLYI + + + + L SID AL ++
Sbjct: 39 KVPVIRVFGATETGQKVCAHIHGAFPYLYIEYRGSLAMEQAATRSLHVSIDHALAVSYRR 98
Query: 143 -GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQ 201
Y +V HIS+ K P YGYH + F KI L P HM++L DLLL GAV Q
Sbjct: 99 NAYDPGTAYVAHISLVKGTPFYGYHVGHKFFFKIYLLNPLHMTRLADLLLQGAVMKRVLQ 158
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---------DSE--------------- 237
PYESH+ YI Q+ DYNLYG + I+ V FR DSE
Sbjct: 159 PYESHMQYIPQWMCDYNLYGCAYIDCRKVTFRGPVPLQCELEDSEHQWHDQNIAPALISD 218
Query: 238 -TSLPKLSHCQLEADVKAESIV 258
+ P+ SHC LE DV + I+
Sbjct: 219 AGAFPRQSHCALEVDVHVQDIL 240
>gi|367021872|ref|XP_003660221.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
gi|347007488|gb|AEO54976.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
Length = 1749
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 31/211 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIRVFG+ G+K C +HG FPYL+I + +P + +L SID+AL ++
Sbjct: 39 KVPVIRVFGSTETGQKVCAHIHGAFPYLFIEYRGPLDKPTVSEYIYRLHLSIDRALAVSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ V +++ K P YG+H R +LKI + P MS+L DLLL G V ++
Sbjct: 99 RRDQYREAPSFVARVTLVKGVPFYGFHVGYRFYLKIYMLNPAVMSRLADLLLQGVVMGQK 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---------------DS-------- 236
FQPYE+H+ Y+LQF DYNLYG ++ VKFR+ DS
Sbjct: 159 FQPYEAHLQYLLQFMTDYNLYGCDYLDAENVKFRAPVPDPAGPDDPPRIWDSNTILPEAI 218
Query: 237 --ETSLPKLSHCQLEADVKAESIVVDMAAND 265
E LP++SHC +E D+ + I+ A +
Sbjct: 219 TDEAELPRVSHCSIEVDICVQHILNRKAVKE 249
>gi|225685289|gb|EEH23573.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb03]
Length = 1707
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 109/202 (53%), Gaps = 29/202 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIRVFG G+K C +HG FPYLYI + + T ++ L S D AL ++
Sbjct: 51 KVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHMSADHALAVSY 110
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+ + +V HI++ K P YGYH R FLKI L+ P HM++L DLL GAV
Sbjct: 111 RRNAYERKISYVAHITLVKGVPFYGYHVGYRFFLKIYLFNPMHMNRLADLLRQGAVMKRV 170
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD----SE------------------ 237
QPYESH+ Y+ Q+ DYNLYG + + + V FR+ SE
Sbjct: 171 LQPYESHLQYLAQWMCDYNLYGCAYLRSSKVMFRAPIPIYSENLTHRWHDRSIPPGSVSD 230
Query: 238 -TSLPKLSHCQLEADVKAESIV 258
++LP+ SHC LE D+ + IV
Sbjct: 231 ISTLPRQSHCDLEVDIHVQDIV 252
>gi|358384921|gb|EHK22518.1| hypothetical protein TRIVIDRAFT_191274 [Trichoderma virens Gv29-8]
Length = 1564
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 121/232 (52%), Gaps = 33/232 (14%)
Query: 60 YLYIPFHHEPITETIVHSELRN-LVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
Y +P H+P V + L +VPVIR+FG+ G+K C VHGVFPYLY+ +
Sbjct: 14 YQALPSRHDPPLRNDVQIQGPPPLNATRVPVIRIFGSTEFGQKVCAHVHGVFPYLYVEYD 73
Query: 119 ---HEPITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTF 172
++ + +L SID AL+I+ Y D + V I++ K P YGY ++F
Sbjct: 74 GNLNQDAVGAFIYRLHLSIDHALSISYRRDQYGDKAKFVARITLVKGIPFYGYSVGYKSF 133
Query: 173 LKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF 232
LKI ++ P M++L DLL G + +FQPYE+H+ Y+LQF IDYNLYG +E + F
Sbjct: 134 LKIYMFNPLVMTRLADLLQQGVIMKRKFQPYEAHLQYLLQFMIDYNLYGCDYVESSQTYF 193
Query: 233 RS--------------------------DSETSLPKLSHCQLEADVKAESIV 258
RS +E +LP+ S+C LE D+ A++I
Sbjct: 194 RSPVPAHHGNTATSSYLWNEHTIPTAFVTNELTLPRESYCSLEVDIAAQNIA 245
>gi|327349945|gb|EGE78802.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1699
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 108/205 (52%), Gaps = 29/205 (14%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALN 139
V KVPVIRVFG G+K C +HG FPYLYI + + T ++ L SID AL
Sbjct: 36 VRPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHLSIDHALA 95
Query: 140 IAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
++ Y+ +V HI++ K P YGYH R F KI L+ P HM++L DLL GAV
Sbjct: 96 VSYRRNAYEKKTAYVAHITLVKGVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQGAVM 155
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET------------------ 238
QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+ T
Sbjct: 156 KRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLENSTHIWHDRSIPESA 215
Query: 239 -----SLPKLSHCQLEADVKAESIV 258
+LP+ SHC LE D+ + I+
Sbjct: 216 VFDSFTLPRQSHCDLEVDIHVQDII 240
>gi|239613873|gb|EEQ90860.1| polymerase zeta subunit [Ajellomyces dermatitidis ER-3]
Length = 1699
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 108/205 (52%), Gaps = 29/205 (14%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALN 139
V KVPVIRVFG G+K C +HG FPYLYI + + T ++ L SID AL
Sbjct: 36 VRPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHLSIDHALA 95
Query: 140 IAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
++ Y+ +V HI++ K P YGYH R F KI L+ P HM++L DLL GAV
Sbjct: 96 VSYRRNAYEKKTAYVAHITLVKGVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQGAVM 155
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET------------------ 238
QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+ T
Sbjct: 156 KRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLENSTHIWHDRSIPESA 215
Query: 239 -----SLPKLSHCQLEADVKAESIV 258
+LP+ SHC LE D+ + I+
Sbjct: 216 VFDSFTLPRQSHCDLEVDIHVQDII 240
>gi|392864138|gb|EAS35055.2| polymerase zeta subunit [Coccidioides immitis RS]
Length = 1679
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVPVIRVFG G+K C +HG FPYLYI + E + + L SID AL ++
Sbjct: 39 KVPVIRVFGATETGQKVCAHIHGAFPYLYIEYRGSLAVEQVKAATRSLHVSIDHALAVSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y +V HIS+ K P YGYH + F KI L P HM++L DLLL GAV
Sbjct: 99 RRNAYDPGTAYVAHISLVKGTPFYGYHVGHKFFFKIYLLNPLHMTRLADLLLQGAVMKRV 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---------DSE------------- 237
QPYESH+ YI Q+ DYNLYG + I+ V FR DSE
Sbjct: 159 LQPYESHMQYIPQWMCDYNLYGCAYIDCRKVTFRGPVPLQCELEDSEHQWHDQSIAPALI 218
Query: 238 ---TSLPKLSHCQLEADVKAESIV 258
+ P+ SHC LE DV + I+
Sbjct: 219 SDAGAFPRQSHCALEVDVHVQDIL 242
>gi|261193585|ref|XP_002623198.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
gi|239588803|gb|EEQ71446.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1699
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 108/205 (52%), Gaps = 29/205 (14%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALN 139
V KVPVIRVFG G+K C +HG FPYLYI + + T ++ L SID AL
Sbjct: 36 VRPKVPVIRVFGATETGQKVCAHIHGAFPYLYIEYQGSLNPKEVNTAIRTLHLSIDHALA 95
Query: 140 IAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
++ Y+ +V HI++ K P YGYH R F KI L+ P HM++L DLL GAV
Sbjct: 96 VSYRRNAYEKKTAYVAHITLVKGVPFYGYHVGYRFFFKIYLFNPMHMTRLADLLRQGAVM 155
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET------------------ 238
QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+ T
Sbjct: 156 KRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLENSTHIWHDRSIPESA 215
Query: 239 -----SLPKLSHCQLEADVKAESIV 258
+LP+ SHC LE D+ + I+
Sbjct: 216 VFDSFTLPRQSHCDLEVDIHVQDII 240
>gi|303313149|ref|XP_003066586.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106248|gb|EER24441.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1679
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVPVIRVFG G+K C +HG FPYLYI + E + + L SID AL ++
Sbjct: 39 KVPVIRVFGATETGQKVCAHIHGAFPYLYIEYRGSLAMEQVKAATRSLHVSIDHALAVSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y +V HIS+ K P YGYH + F KI L P HM++L DLLL GAV
Sbjct: 99 RRNAYDPGTAYVAHISLVKGTPFYGYHVGHKFFFKIYLLNPLHMTRLADLLLQGAVMKRV 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---------DSE------------- 237
QPYESH+ YI Q+ DYNLYG + I+ V FR DSE
Sbjct: 159 LQPYESHMQYIPQWMCDYNLYGCAYIDCRKVTFRGPVPLQCELEDSEHQWHDQNIAPALI 218
Query: 238 ---TSLPKLSHCQLEADVKAESIV 258
+ P+ SHC LE DV + I+
Sbjct: 219 SDAGAFPRQSHCALEVDVHVQDIL 242
>gi|427785295|gb|JAA58099.1| Putative dna polymerase [Rhipicephalus pulchellus]
Length = 4474
Score = 143 bits (360), Expect = 2e-31, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 32/224 (14%)
Query: 77 SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDK 136
S+L + +VPV+R+FG G+K C+ VHG PYL +P EP E LA+ ID
Sbjct: 25 SKLGGWEVWQVPVLRIFGVTPAGQKACLHVHGALPYLTVPCT-EPRPERFAVVLASEIDL 83
Query: 137 ALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
LN A G S+ +HV H+++ + +YG+H E TFL+I LY P H+ K+ +LLL+G V
Sbjct: 84 LLNTAAGRATSMHRHVHHVAVFRGTRLYGFHDREETFLRIYLYNPNHVPKVAELLLSGHV 143
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD-------------------S 236
+ QP+E+HIPY LQF +D+ L+GMS + KFR S
Sbjct: 144 LKQTMQPHEAHIPYALQFMVDHKLHGMSFVRVESFKFRRPLSWAHDDRSKALGSGPGIWS 203
Query: 237 ETSLP--------KLSHCQLEADVKAESIVVDMAANDSDVATSG 272
+LP K + C+LE D A+ I + AND D+ G
Sbjct: 204 LRNLPVELFGDLEKQTTCELELDCCAKDI---LNANDKDMLNPG 244
>gi|334183720|ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1916
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 48/235 (20%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++M+ PI ++ +S + + +VPVIR++G+ G+KTC+ +H PY
Sbjct: 10 VFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP P+ HH+
Sbjct: 70 LYIPCSEIPLE----------------------------------------------HHK 83
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL-YE 179
+ + L L+ ++KAL + QH+ I + YGYH+ E F+KI L Y
Sbjct: 84 GVDGSTL-ALSLELEKALKLKGNAASKRQHIHDCEIVRAKKFYGYHSTEEAFVKIYLSYH 142
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
P +++ LLL GAV + QPYESHIP+ILQF +DYNLYGM ++ + +KFRS
Sbjct: 143 PPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFRS 197
>gi|42563023|ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1890
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 48/235 (20%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++M+ PI ++ +S + + +VPVIR++G+ G+KTC+ +H PY
Sbjct: 10 VFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP P+ HH+
Sbjct: 70 LYIPCSEIPLE----------------------------------------------HHK 83
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL-YE 179
+ + L L+ ++KAL + QH+ I + YGYH+ E F+KI L Y
Sbjct: 84 GVDGSTL-ALSLELEKALKLKGNAASKRQHIHDCEIVRAKKFYGYHSTEEAFVKIYLSYH 142
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
P +++ LLL GAV + QPYESHIP+ILQF +DYNLYGM ++ + +KFRS
Sbjct: 143 PPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFRS 197
>gi|240275145|gb|EER38660.1| polymerase zeta subunit [Ajellomyces capsulatus H143]
Length = 1503
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 106/202 (52%), Gaps = 29/202 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIRVFG G+K C VHG FPYLYI + + T ++ L SID AL I+
Sbjct: 39 KVPVIRVFGTTETGQKVCAHVHGAFPYLYIEYQGSLNPKEVNTAIRTLQLSIDHALAISY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+ + +V HI+ K P YGYH R F KI L+ P +M++L DLL GAV
Sbjct: 99 RRNAYEKKMAYVAHITFVKGIPFYGYHVGYRFFFKIYLFNPMNMTRLADLLRQGAVMKRV 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD-----------------------S 236
QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+
Sbjct: 159 LQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLENSTHIWHDRSIPESAVLD 218
Query: 237 ETSLPKLSHCQLEADVKAESIV 258
+ LP+ SHC LE D+ + I+
Sbjct: 219 NSILPRQSHCDLEVDIHVQDII 240
>gi|380491086|emb|CCF35569.1| DNA polymerase family B, partial [Colletotrichum higginsianum]
Length = 1706
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 121/237 (51%), Gaps = 46/237 (19%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQ-------KVPVIRVFGNNVEGKKTCVFVHGVFPY 112
Y P H++P +LRN V KVPV+RVFG+ G+K C +HG FPY
Sbjct: 14 YQATPTHYDP--------QLRNDVGPGQAKKGPKVPVVRVFGSTETGQKVCAHIHGAFPY 65
Query: 113 LYIPFHHEPITETM---LQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYH 166
LY+ + E + + +L SID AL ++ Y D+ + V I++ K P YG+H
Sbjct: 66 LYVEYQGSLEPEEVGAYIYRLHLSIDHALAVSYRRDQYGDNAKFVARITLVKGIPFYGFH 125
Query: 167 ADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIE 226
R FLKI ++ P M++L DLL G + +FQPYE+H+ Y+LQF DYNLYG +E
Sbjct: 126 VGYRFFLKIYMFNPIVMTRLADLLQQGVILKSKFQPYEAHLQYLLQFMTDYNLYGCGYLE 185
Query: 227 FNMVKFRSD-------------------------SETSLPKLSHCQLEADVKAESIV 258
+ V FR + SLP++SHC +E D+ +SI+
Sbjct: 186 TSDVYFRGPVPSCEEEGNSQHLWHDRTIPHGRILDDLSLPRVSHCSIEVDICVQSII 242
>gi|3176661|gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 52/239 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++M+ PI ++ +S + + +VPVIR++G+ G+KTC+ +H PY
Sbjct: 10 VFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP P+ HH+
Sbjct: 70 LYIPCSEIPLE----------------------------------------------HHK 83
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL--- 177
+ + L L+ ++KAL + QH+ I + YGYH+ E F+KI L
Sbjct: 84 GVDGSTL-ALSLELEKALKLKGNAASKRQHIHDCEIVRAKKFYGYHSTEEAFVKIYLYPY 142
Query: 178 --YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
Y P +++ LLL GAV + QPYESHIP+ILQF +DYNLYGM ++ + +KFRS
Sbjct: 143 SSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFRS 201
>gi|154286640|ref|XP_001544115.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407756|gb|EDN03297.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 430
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 106/202 (52%), Gaps = 29/202 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIRVFG G+K C VHG FPYLYI + + T ++ L S+D AL I+
Sbjct: 32 KVPVIRVFGTTETGQKVCAHVHGAFPYLYIEYQGSLNPKEVNTAIRTLQLSVDHALAISY 91
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+ + +V HI+ K P YGYH R F KI L+ P +M++L DLL GAV
Sbjct: 92 RRNAYEKKMAYVAHITFVKGIPFYGYHVGYRFFFKIYLFNPMNMTRLADLLRQGAVMKRV 151
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS-------------------- 239
QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+ T
Sbjct: 152 LQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLGNSTHIWHDRSIPESAVLD 211
Query: 240 ---LPKLSHCQLEADVKAESIV 258
LP+ SHC LE D+ + I+
Sbjct: 212 NSILPRQSHCDLEVDIHVQDII 233
>gi|12324676|gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis
thaliana]
Length = 1871
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 52/239 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++M+ PI ++ +S + + +VPVIR++G+ G+KTC+ +H PY
Sbjct: 10 VFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRALPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LYIP P+ HH+
Sbjct: 70 LYIPCSEIPLE----------------------------------------------HHK 83
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL--- 177
+ + L L+ ++KAL + QH+ I + YGYH+ E F+KI L
Sbjct: 84 GVDGSTL-ALSLELEKALKLKGNAASKRQHIHDCEIVRAKKFYGYHSTEEAFVKIYLYPY 142
Query: 178 --YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
Y P +++ LLL GAV + QPYESHIP+ILQF +DYNLYGM ++ + +KFRS
Sbjct: 143 SSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMGHVHISKMKFRS 201
>gi|212544614|ref|XP_002152461.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210065430|gb|EEA19524.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 1655
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 105/204 (51%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETMLQQLAASIDKALNIAL 142
KVPVIR FG G+K C VHG FPYLYI + + ++ L ASID AL +
Sbjct: 39 KVPVIRAFGATETGQKVCAHVHGAFPYLYIEYRGGLGQDEVNNAIRNLHASIDHALANSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V +V HIS+ K P YGYH R +LKI L P ++ +L DLL GAV
Sbjct: 99 RQNAYDGRVAYVAHISLVKGVPFYGYHVGYRFYLKIYLLNPMNIIRLADLLRQGAVMKTM 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QPYESH+ +I Q+ DYNLYG + ++ VKFRS
Sbjct: 159 LQPYESHLQFIPQWMCDYNLYGCAYMDCAKVKFRSPVPEYLELSNLDHRWHDRTIPPKYI 218
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
SET LPK SHC LE DV + I+
Sbjct: 219 TSETVLPKQSHCTLEVDVCVQDIL 242
>gi|322709541|gb|EFZ01117.1| hypothetical protein MAA_03713 [Metarhizium anisopliae ARSEF 23]
Length = 1698
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 46/244 (18%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQ-------KVPVIRVFGNNVEGKKTCVFVHGVFPY 112
Y IP ++P +LRN V KVPV+R+FG+ G+K C VHG FPY
Sbjct: 14 YQAIPTRYDP--------QLRNDVRASQVAKGPKVPVVRIFGSTETGQKVCAHVHGAFPY 65
Query: 113 LYIPFHHEPITETM---LQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYH 166
LY+ + + + + + +L SID AL ++ Y + + V I++ K P YG+H
Sbjct: 66 LYVEYDGDLAPDEVGAYIYRLHLSIDHALAVSYRRDQYGEDAKFVARITLVKGIPFYGFH 125
Query: 167 ADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIE 226
R FLKI ++ P M++L DLL G + +FQPYE+H+ Y+LQF +DYNLYG +E
Sbjct: 126 VGYRFFLKIYMFNPIVMTRLADLLQQGVIMKRKFQPYEAHLQYLLQFMVDYNLYGCGYLE 185
Query: 227 FNMVKFRS-------------------------DSETSLPKLSHCQLEADVKAESIVVDM 261
+ FRS + SLP++SHC +E D+ + IV
Sbjct: 186 SSKTAFRSPIPAYDAGSNSSHLWHSQSVLPQHITDDPSLPRVSHCSIEVDICVQHIVNRQ 245
Query: 262 AAND 265
A +
Sbjct: 246 AVKE 249
>gi|302783240|ref|XP_002973393.1| hypothetical protein SELMODRAFT_413713 [Selaginella moellendorffii]
gi|300159146|gb|EFJ25767.1| hypothetical protein SELMODRAFT_413713 [Selaginella moellendorffii]
Length = 1656
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETM--LQQLAASIDKAL 138
+ +VPV+R++G+ + G+KTC+ +H PY Y+P+ + + E M +++LA ++++A+
Sbjct: 41 VMEVPVVRIYGSTLAGQKTCLHLHKALPYFYVPYDDDLPQSLEEAMAFVRRLALALERAM 100
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
+A QHV + + +YGYH E TF+KI LY P S++ LL+G + N
Sbjct: 101 KMASSIGAKRQHVHSCDLVRAKKLYGYHPSEDTFIKITLYYPQEASQMSAFLLSGGILNR 160
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+FQPYE+HIPY+LQ IDYNL GM +E + ++FRS LP + E K ++
Sbjct: 161 KFQPYEAHIPYLLQLKIDYNLAGMGLLEVSSLRFRS----PLPDTPN---ERKRKISALN 213
Query: 259 VDMAANDSDVATS 271
A ND TS
Sbjct: 214 TPAAENDGSWFTS 226
>gi|322696805|gb|EFY88592.1| hypothetical protein MAC_05357 [Metarhizium acridum CQMa 102]
Length = 1677
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 36/238 (15%)
Query: 61 LYIPFHHEPITETIVHSELRNLVIQ--KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
+ IP ++P V + + V++ KVPV+R+FG+ G+K C VHG FPYLY+ ++
Sbjct: 1 MAIPTRYDPQLRNDVRA---SQVVRGPKVPVVRIFGSTETGQKVCAHVHGAFPYLYVEYN 57
Query: 119 HEPITETM---LQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTF 172
+ + + + +L SID AL ++ Y ++ + V I++ K P YG+H R F
Sbjct: 58 GDLAPDEVGAYIYRLHLSIDHALAVSYRRDQYGENAKFVARITLVKGIPFYGFHVGYRFF 117
Query: 173 LKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF 232
LKI ++ P M++L DLL G + +FQPYE+H+ Y+LQF +DYNLYG +E + F
Sbjct: 118 LKIYMFNPIVMTRLADLLQQGVIMKRKFQPYEAHLQYLLQFMVDYNLYGCDYLESSKTAF 177
Query: 233 RS-------------------------DSETSLPKLSHCQLEADVKAESIVVDMAAND 265
RS + SLP++SHC +E D+ + I A +
Sbjct: 178 RSPVPAYDAGSNSSHLWHSQSVLPQHITDDPSLPRVSHCSIEVDICVQHIANRQAVKE 235
>gi|116193749|ref|XP_001222687.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
gi|88182505|gb|EAQ89973.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
Length = 1755
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 31/203 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIRVFG+ G+K C VHG FPYLYI + +P + L SID+AL I
Sbjct: 39 KVPVIRVFGSTETGQKVCAHVHGAFPYLYIEYRGPLDKPTVSEYIYALHLSIDRALAINY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
++ + V +++ K P YG+H R +LKI + P M++L DLLL G V ++
Sbjct: 99 RRDQRREPQRFVARVTLVKGVPFYGFHVGYRYYLKIYMLNPVVMTRLADLLLQGLVMGQK 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---------------DSET------ 238
FQPYE+H+ Y+LQF DYNLYG ++ V+FR DS T
Sbjct: 159 FQPYEAHLQYLLQFMADYNLYGCDYLDAEDVRFRGPIPDPAGPDDPPRIWDSNTILPEAI 218
Query: 239 ----SLPKLSHCQLEADVKAESI 257
SLP+ SHC +E D+ ++I
Sbjct: 219 TNEMSLPRASHCSIEVDICVQNI 241
>gi|328866324|gb|EGG14709.1| DNA polymerase zeta catalytic subunit [Dictyostelium fasciculatum]
Length = 2115
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 55/253 (21%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
FS+ IV +D+++ KP+ +D + S L N IQ+VP++RVFG+ G+K C+ +H +FPY
Sbjct: 25 FSVRIVDLDYYLYKPVEKYDVIKSPLDNSTIQQVPIVRVFGSTPAGQKCCLHLHNLFPYF 84
Query: 62 YIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP 121
+I ++ + +P +E
Sbjct: 85 FIQYNDD----------------------------------------------LPLDNEQ 98
Query: 122 ITETMLQQLAASIDKAL----NIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL 177
I +++L ASI+ A+ + ++VQH+F+I + K P YGY+ D + F+KI L
Sbjct: 99 IN-IFVRKLVASINIAMVTNQKQSNNNNNNVQHIFNIKLTKGRPFYGYYPDNKIFIKIFL 157
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
Y P +++K+ +LL +G++ +F+ +E+HIP++LQ +DYNL GMS I+F V FR
Sbjct: 158 YNPDNLNKISNLLRSGSIMGRKFEVFEAHIPFLLQVFLDYNLAGMSFIDFTRVHFRH--- 214
Query: 238 TSLPKLSHCQLEA 250
LP+ H +
Sbjct: 215 -PLPQSKHTTWDG 226
>gi|320168960|gb|EFW45859.1| DNA polymerase zeta catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 2719
Score = 139 bits (351), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 121/238 (50%), Gaps = 21/238 (8%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
FSM IV D +M+ P+ D + ++ +VPVIR++G+ G++TC+ +H VFPY+
Sbjct: 73 FSMRIVDADSYMTAPVPSLDVMRTDHDGSSCHRVPVIRLYGSTPAGQRTCLHIHRVFPYI 132
Query: 62 YIPFHHEPITETIVHSELRNLVIQKVPVIRVFGN---NVEGKKTCVFVHGVFPYLYIPFH 118
YIP++ ++ V + + + F N + G T V
Sbjct: 133 YIPYYGPTSSDRDVRQYCCQMAVSIDVAVDAFNNTGFSAGGDSTAASVAAS--------R 184
Query: 119 HEPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKI 175
P L+ A A G+ + QHVF I + + P YGY +R FLKI
Sbjct: 185 QNP-------GLSGPGRPAAQQAGGFANMRRKGQHVFKIVLAQGAPFYGYAPRDRLFLKI 237
Query: 176 LLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
L+ P + K+ LL +G V FQPYE+HIP++LQF ID+NLYGM+ ++ ++ +FR
Sbjct: 238 FLFNPATVGKVVHLLQSGFVMGREFQPYEAHIPFLLQFLIDFNLYGMNFVQLSLARFR 295
>gi|317032425|ref|XP_001394913.2| DNA polymerase zeta catalytic subunit [Aspergillus niger CBS
513.88]
gi|350631625|gb|EHA19996.1| hypothetical protein ASPNIDRAFT_179788 [Aspergillus niger ATCC
1015]
Length = 1668
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 110/204 (53%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G+K CV VHG FPYLY+ + + TE + L+ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYVEYDGDLETEKVNSALRSLRLSIDHALAVSY 98
Query: 143 GYKDSVQH---VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
++ + V HI++ K P YGYH + + KI L P +M++L DLLL GA+
Sbjct: 99 NRNENAKKIPFVAHITLVKGVPFYGYHVGYKFYFKIYLMSPIYMTRLADLLLQGAILKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------------------------ 235
QPYESH+ +I Q+ DY+LYG + ++ + VKFRS
Sbjct: 159 LQPYESHLQFIPQWMCDYSLYGCAYLKCSKVKFRSPIPEYFELTDLSHRWHDRSVQPDDL 218
Query: 236 -SETSLPKLSHCQLEADVKAESIV 258
E+ PK SHC LE D+ + I+
Sbjct: 219 LDESVFPKQSHCPLEVDICVQDIL 242
>gi|134079611|emb|CAK40828.1| unnamed protein product [Aspergillus niger]
Length = 1668
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 110/204 (53%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G+K CV VHG FPYLY+ + + TE + L+ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYVEYDGDLETEKVNSALRSLRLSIDHALAVSY 98
Query: 143 GYKDSVQH---VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
++ + V HI++ K P YGYH + + KI L P +M++L DLLL GA+
Sbjct: 99 NRNENAKKIPFVAHITLVKGVPFYGYHVGYKFYFKIYLMSPIYMTRLADLLLQGAILKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------------------------ 235
QPYESH+ +I Q+ DY+LYG + ++ + VKFRS
Sbjct: 159 LQPYESHLQFIPQWMCDYSLYGCAYLKCSKVKFRSPIPEYFELTDLSHRWHDRSVQPDDL 218
Query: 236 -SETSLPKLSHCQLEADVKAESIV 258
E+ PK SHC LE D+ + I+
Sbjct: 219 LDESVFPKQSHCPLEVDICVQDIL 242
>gi|83773395|dbj|BAE63522.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863054|gb|EIT72368.1| DNA polymerase zeta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1566
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 107/204 (52%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVPVIR+FG G++ CV VHG FPYLY+P+ + E + ++ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQRVCVHVHGAFPYLYVPYDGDLSPEEVRRAIRDLHISIDHALALSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V HI++ K P YGYH R F K+ L P + +++ DLLL GA+
Sbjct: 99 RRNAYDKKAAFVAHITLVKGVPFYGYHVGYRFFFKVYLLSPIYTTRVADLLLQGAILKRS 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QPYESH+ YI Q+ DY+LYG + ++ + VKFRS
Sbjct: 159 LQPYESHLQYIPQWMCDYSLYGCAYMKCSKVKFRSPVPEYLELTNLSHRWHDRSIQPDSI 218
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
+ LPK SHC LE D+ + I+
Sbjct: 219 SDASELPKQSHCPLEVDICVQDIL 242
>gi|340519636|gb|EGR49874.1| zeta catalytic subunit of dna polymerase [Trichoderma reesei QM6a]
Length = 1596
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 121/233 (51%), Gaps = 38/233 (16%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH- 118
Y +P H+P + + L N +VPVIR+FG+ G+K C VHGVFPYLY+ +
Sbjct: 14 YQALPSRHDPQLRNDLQAPLVNAT--RVPVIRIFGSTEFGQKVCAHVHGVFPYLYVEYDG 71
Query: 119 --HEPITETMLQQLAASIDKALNIALGYK-----DSVQHVFHISICKKFPMYGYHADERT 171
++ + +L SID AL A+ Y+ D + V I++ K P YGY +
Sbjct: 72 DLNQDAVGAFIYRLHLSIDHAL--AISYRRDQDGDKAKFVARITLVKGVPFYGYAVGYKP 129
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
FLKI ++ P M++L DLL G + +FQPYE+H+ Y+LQF +DYNLYG +E +
Sbjct: 130 FLKIYMFNPMVMTRLADLLQQGVILKRKFQPYEAHLQYLLQFMVDYNLYGCDYVESSQTF 189
Query: 232 FRS----------------DSET----------SLPKLSHCQLEADVKAESIV 258
FR D T +LP+ S+C +E D+ A++I+
Sbjct: 190 FRCPVPPRHEGNAASSQLWDEGTVPVDYITDDLALPRESYCSIEVDISAQNII 242
>gi|88604888|gb|ABD46764.1| REV3 [Neurospora crassa]
Length = 1926
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L S D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPSKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPPELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|358393560|gb|EHK42961.1| hypothetical protein TRIATDRAFT_294114 [Trichoderma atroviride IMI
206040]
Length = 1556
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 33/231 (14%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH- 118
Y +P H+P V + L KVPVIR+FG+ G+K C VHGVFPY+Y+ +
Sbjct: 14 YQALPSRHDPPLRNDVQAPP-PLKATKVPVIRIFGSTEFGQKVCAHVHGVFPYMYVEYDG 72
Query: 119 --HEPITETMLQQLAASIDKALNIALGYK---DSVQHVFHISICKKFPMYGYHADERTFL 173
+ + + +L SID AL I+ D + V I++ K P YGY + FL
Sbjct: 73 NLNRDAVGSFVYRLHLSIDHALGISYRQDQNGDKARFVARITLVKGTPFYGYSVGYKFFL 132
Query: 174 KILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
KI ++ P M++L DLL G + +FQPYE+H+ Y+LQF IDYNLYG +E + FR
Sbjct: 133 KIYMFNPAVMTRLADLLQQGVILKRKFQPYEAHLQYLLQFMIDYNLYGCDFVESSQTYFR 192
Query: 234 S--------------------------DSETSLPKLSHCQLEADVKAESIV 258
S ++ +LP+ S+C +E D+ A++I
Sbjct: 193 SPVPASGTSTPSSQLPWNIQTVPKTFITNDAALPRESYCSIEVDIAAQNIT 243
>gi|317151429|ref|XP_001824655.2| DNA polymerase zeta catalytic subunit [Aspergillus oryzae RIB40]
Length = 1670
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 107/204 (52%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVPVIR+FG G++ CV VHG FPYLY+P+ + E + ++ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQRVCVHVHGAFPYLYVPYDGDLSPEEVRRAIRDLHISIDHALALSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V HI++ K P YGYH R F K+ L P + +++ DLLL GA+
Sbjct: 99 RRNAYDKKAAFVAHITLVKGVPFYGYHVGYRFFFKVYLLSPIYTTRVADLLLQGAILKRS 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QPYESH+ YI Q+ DY+LYG + ++ + VKFRS
Sbjct: 159 LQPYESHLQYIPQWMCDYSLYGCAYMKCSKVKFRSPVPEYLELTNLSHRWHDRSIQPDSI 218
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
+ LPK SHC LE D+ + I+
Sbjct: 219 SDASELPKQSHCPLEVDICVQDIL 242
>gi|357121575|ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Brachypodium
distachyon]
Length = 1720
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 60/261 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+ IV++D++M+ P+ FD +
Sbjct: 16 VLSVRIVSLDYYMAPPLPGFD--------------------------------------F 37
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
Y PFH E + E VPVIR++G+ G+KTC+ VH PYLY+P+ E
Sbjct: 38 TYSPFHCEEVEE--------------VPVIRIYGSTPAGQKTCLHVHQALPYLYVPYPEE 83
Query: 121 PI-----TETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKI 175
+ + + L + ++KAL + K +H+ S+ + +YGYH+ E F+KI
Sbjct: 84 LLHNIERGNSCMTGLLSDLEKALQVRGPAKR--KHIHGCSLVRAKKLYGYHSCEEIFVKI 141
Query: 176 LLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD 235
LY P+ +S+ LL+GAV N FQPYESHIPY+L F +DYNLYGM ++ KFR
Sbjct: 142 YLYYPHEVSRAATHLLDGAVLNRVFQPYESHIPYLLHFLVDYNLYGMGHVHVTDFKFRPP 201
Query: 236 SETSL-PKLSHCQLEADVKAE 255
P H ++++ V++E
Sbjct: 202 LPDDFHPNTLHRKVDSSVESE 222
>gi|451997476|gb|EMD89941.1| hypothetical protein COCHEDRAFT_1178083 [Cochliobolus
heterostrophus C5]
Length = 1754
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 106/206 (51%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
+VPVIR FG G+K C +HG PYLY+ + + + + L SID+AL A
Sbjct: 83 EVPVIRAFGATETGQKVCAHIHGALPYLYLEYDGSLETDVVNSYILDLRTSIDQAL--AT 140
Query: 143 GYKDSV-----QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ + +V HIS+ K P YGYH +TFLK+ L P HM++ DLL GA+ N
Sbjct: 141 AYRRNTLDGKSTYVGHISLVKGVPFYGYHVGYKTFLKVYLLNPMHMTRFADLLHQGAILN 200
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---DS------------------ 236
FQPYESH+ Y+LQ+ DYNLYG I+ V+FR DS
Sbjct: 201 RVFQPYESHLQYLLQWMCDYNLYGCDYIDCAKVQFRGPVPDSGEVDTTIHKWHDASIPDD 260
Query: 237 ----ETSLPKLSHCQLEADVKAESIV 258
E P+ SHC LE D+ + I+
Sbjct: 261 FMADEDQYPRQSHCTLEVDICVQDIL 286
>gi|302919112|ref|XP_003052793.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733733|gb|EEU47080.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1682
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 42/232 (18%)
Query: 67 HEPITETIVHSELRNLVIQ-------KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
H T T +LRN V KVPV+R+FG+ G+K C VHG FPYLY+ +
Sbjct: 13 HYQATPTRYDPQLRNDVRPSQISKGPKVPVVRIFGSTETGQKVCAHVHGAFPYLYVEYQG 72
Query: 120 EPITETM---LQQLAASIDKALNIALGYK-----DSVQHVFHISICKKFPMYGYHADERT 171
+ + + + SID AL A+ Y+ D+ + V I++ K P YG+H R
Sbjct: 73 SLAPDEVGAYIYRFHLSIDHAL--AVSYRRDKKGDNARFVARITLVKGVPFYGFHVGYRF 130
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
FLKI ++ P M++L DLL G + ++FQPYE+H+ Y+LQF D+NLYG ++ + +
Sbjct: 131 FLKIYMFNPVVMTRLADLLQQGVIMKQKFQPYEAHLQYLLQFMTDFNLYGCDYLDASSTR 190
Query: 232 FRS-------------------------DSETSLPKLSHCQLEADVKAESIV 258
FRS ET+LP+ SHC +E D+ + I+
Sbjct: 191 FRSPVPEYDQGLNSTHLWHTRSIPEGYITDETTLPRASHCSIEVDICVQDII 242
>gi|115402505|ref|XP_001217329.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
gi|114189175|gb|EAU30875.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
Length = 1696
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 106/204 (51%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G+K CV VHG FPYLY+ + E + ++ L SID AL +
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYVQYDGSLQPEDVRSAIRSLHHSIDHALAASY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y +V HI++ K P YGYH R F KI L P + ++L DLL+ GAV
Sbjct: 99 RRNAYDKRAVYVAHITLVKGVPFYGYHVGYRFFFKIYLLSPLYTTRLADLLIQGAVLKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QPYESH+ Y+ Q+ DY+LYG + ++ VKFRS
Sbjct: 159 LQPYESHLQYVPQWMCDYSLYGCAYMKCGKVKFRSPVPEWLELNDLSHHWHDRSISPDCI 218
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
E++LPK SHC LE D+ + I+
Sbjct: 219 SDESALPKQSHCPLEVDICVQDIL 242
>gi|88604878|gb|ABD46759.1| REV3 [Neurospora crassa]
Length = 1926
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 119/230 (51%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+ L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 D---------LEPNKDHALAISYRKDPIRDRPKYVARISLTKGTPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL +G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQHGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------DSE----------------TSLPKLSHCQLEADVKAESIV 258
D+E SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIELRDAEHHWDDTTIPPELITDDYSLPRASHCSLEVDICVEDIL 233
>gi|68236020|gb|AAY88346.1| REV3 [Neurospora crassa]
Length = 1926
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPPELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|310794043|gb|EFQ29504.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1722
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 46/237 (19%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQ-------KVPVIRVFGNNVEGKKTCVFVHGVFPY 112
Y P H++P +LRN V K+PV+RVFG+ G+K C +HG FPY
Sbjct: 14 YQATPTHYDP--------QLRNDVGPAQAKRGPKIPVVRVFGSTETGQKVCAHIHGAFPY 65
Query: 113 LYIPFHHEPITETM---LQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYH 166
LY+ + E + + +L SID AL ++ Y ++ + V I++ K P YG+H
Sbjct: 66 LYVEYQGSLEPEEVGAYIYRLHLSIDHALAVSYRRDQYGENAKFVARITLVKGVPFYGFH 125
Query: 167 ADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIE 226
R FLKI ++ P M++L DLL G + +FQPYE+H+ Y+LQF DYNLYG ++
Sbjct: 126 VGYRFFLKIYMFNPIVMTRLADLLQQGVILKRKFQPYEAHLQYLLQFMTDYNLYGCGYLD 185
Query: 227 FNMVKFRSD-------------------------SETSLPKLSHCQLEADVKAESIV 258
+ V FR+ ++ SLP++SHC +E D+ ++I+
Sbjct: 186 VSDVYFRAPVPSFEEEGNSEHIWHDRTIPPTRVLNDPSLPRISHCSVEVDICVQNIM 242
>gi|85112057|ref|XP_964235.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
gi|18150172|dbj|BAB83627.1| catalytic subunit of DNA polymerase zeta [Neurospora crassa]
gi|28926008|gb|EAA34999.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
Length = 1926
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPSELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|88866509|gb|ABD57304.1| REV3 [Neurospora crassa]
Length = 1581
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPPELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|429862842|gb|ELA37449.1| DNA polymerase zeta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1719
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVPV+RVFG+ G+K C +HG FPYLY+ + E + + +L SID AL ++
Sbjct: 39 KVPVVRVFGSTETGQKVCAHIHGAFPYLYVEYQGSLEPEDVGAYIYRLHLSIDHALAVSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y D+ + V I++ K P YG+H R FLKI ++ P M++L DLL G + ++
Sbjct: 99 RRDQYADNAKFVARITLVKGIPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVILKKK 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------------------------ 235
FQPYE+H+ Y+LQF DYNLYG ++ + V FR
Sbjct: 159 FQPYEAHLQYLLQFMTDYNLYGCGYLDASDVFFRGPIPSYDVEGNSQHLWHDHSIPRGRV 218
Query: 236 -SETSLPKLSHCQLEADVKAESIV 258
+ SLP++SHC +E D+ ++I+
Sbjct: 219 LEDLSLPRVSHCSVEVDICVQNII 242
>gi|88604884|gb|ABD46762.1| REV3 [Neurospora crassa]
Length = 1926
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPPELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|88604882|gb|ABD46761.1| REV3 [Neurospora crassa]
Length = 1926
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVTRISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPSELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|88604886|gb|ABD46763.1| REV3 [Neurospora crassa]
Length = 1926
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGREAEHHWDDTTIPPELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|255944163|ref|XP_002562849.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587584|emb|CAP85625.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1697
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G++ CV VHG FPYLYI ++ E + ++ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQRVCVHVHGAFPYLYIEYNGSLAPEDVNSAIRTLHLSIDHALAVSF 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V HI++ K P YGYH R F KI L P+HM++L DLL GAV
Sbjct: 99 RRNAYDRRTAFVAHITLVKGVPFYGYHVGWRFFFKIYLLNPFHMTRLVDLLHQGAVMKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------------------------ 235
QPYE+H+ YI Q+ DYNLYG + + + KFR+
Sbjct: 159 LQPYEAHVQYIPQWMCDYNLYGCAIMSCSQAKFRAPVPEYFELSNLAHRWHDRSILPESI 218
Query: 236 -SETSLPKLSHCQLEADVKAESIV 258
+L K SHC LE DV + I+
Sbjct: 219 LDHPALQKQSHCALEVDVCVQDIL 242
>gi|358369172|dbj|GAA85787.1| DNA polymerase zeta catalytic subunit [Aspergillus kawachii IFO
4308]
Length = 1675
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 110/204 (53%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G+K CV VHG FPYLY+ + + TE + ++ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYVEYDGDLETEKVSSAIRSLRLSIDHALAVSY 98
Query: 143 GYKDSVQH---VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
++ + V HI++ K P YGYH + + KI L P +M++L DLLL GAV
Sbjct: 99 NRNENAKKIAFVAHITLVKGVPFYGYHVGYKFYFKIYLMNPIYMTRLADLLLQGAVLKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------------------------ 235
QPYESH+ ++ Q+ DY+LYG + ++ + VKFRS
Sbjct: 159 LQPYESHLQFVPQWMCDYSLYGCAYLKCSKVKFRSPVPEYFELTDLSHRWHDRSVQPDDL 218
Query: 236 -SETSLPKLSHCQLEADVKAESIV 258
++ PK SHC LE D+ + I+
Sbjct: 219 LDDSLFPKQSHCPLEVDICVQDIL 242
>gi|321470468|gb|EFX81444.1| hypothetical protein DAPPUDRAFT_26394 [Daphnia pulex]
Length = 184
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID 135
+S R L I+KVPVIR+FG+ G K C+ VHGVFPYLY+P+ + M Q+ ++D
Sbjct: 24 YSTYRGLEIKKVPVIRIFGSTSTGYKVCLHVHGVFPYLYVPYDGSAPPDKMGHQIVIALD 83
Query: 136 KALNIALG-YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA 194
+A+NI G S HVF + P+YGYH E K+ Y P DLLLNG
Sbjct: 84 RAVNILQGQVNSSSHHVFKAVLVSGIPIYGYHGKEHQLFKLYFYNPNTRKHSYDLLLNGV 143
Query: 195 VFNERFQPYESHIPYILQFCIDYNLYGMSNIE 226
V + QP E HIPYILQF +D+NL GM+ I
Sbjct: 144 VLKKILQPCEGHIPYILQFLMDFNLQGMNFIH 175
>gi|367041926|ref|XP_003651343.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
gi|346998605|gb|AEO65007.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
Length = 1752
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 120/239 (50%), Gaps = 36/239 (15%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQ-KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--- 115
Y P ++P H L Q KVPVIRVFG+ G+K C +HG FPYLYI
Sbjct: 14 YQAAPTRYDPPLRRDAH--LTEAAKQPKVPVIRVFGSTETGQKVCAHIHGAFPYLYIEYG 71
Query: 116 -PFHHEPITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERT 171
P ++E + +L SID AL ++ Y+D V I++ K P YG++ R
Sbjct: 72 GPLDKATVSE-YIYRLHLSIDHALAVSYRRDQYRDRQSFVARITLVKGVPFYGFYVGYRF 130
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
+LKI + P M++L DLL G + +FQPYE+H+ Y+LQF DYNLYG ++ V+
Sbjct: 131 YLKIYMLNPVVMTRLADLLQQGLIMGRKFQPYEAHLQYLLQFMTDYNLYGCDYLDAGKVR 190
Query: 232 FRS---------------DSET----------SLPKLSHCQLEADVKAESIVVDMAAND 265
FR+ DS T LP++SHC +E D+ + I+ A +
Sbjct: 191 FRAPVPDPAGPDEAPRIWDSNTIPPESITDEYGLPRVSHCSIEVDICVQDILNRKAVKE 249
>gi|389646163|ref|XP_003720713.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351638105|gb|EHA45970.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440468549|gb|ELQ37705.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae Y34]
gi|440481173|gb|ELQ61787.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae P131]
Length = 1782
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 39/236 (16%)
Query: 60 YLYIPFHHEP-ITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
Y P ++P + + HS+L KVPVIRVFG+ G+K C +HG FPYL+I ++
Sbjct: 14 YQATPTQYDPCLRNDVRHSQL--FKEPKVPVIRVFGSTQTGQKVCAHIHGAFPYLFIEYN 71
Query: 119 HEPITETMLQ---QLAASIDKALNIALGY----KDSVQHVFHISICKKFPMYGYHADERT 171
+ E + +L SID AL ++ +D+ ++V I++ K P YG+H +
Sbjct: 72 GKLDQEEVGAFSYRLHLSIDHALAVSYRQDAYARDTPKYVARITLVKGVPFYGFHVGYKY 131
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
+LKI + P M++L DLL G + +FQPYE+H+ YILQF DYNLYG IE + VK
Sbjct: 132 YLKIYMLNPVVMTRLADLLHQGVIMKRKFQPYEAHLQYILQFMTDYNLYGCGYIEASSVK 191
Query: 232 FRS--------DSET---------------------SLPKLSHCQLEADVKAESIV 258
FR+ D ++ SLP+ SHC +E D+ + I+
Sbjct: 192 FRAPVPQIDDDDMDSVMTPHIWHNQSISQKQITDHHSLPRASHCPIEVDICVQDIL 247
>gi|453079938|gb|EMF07990.1| hypothetical protein SEPMUDRAFT_167090 [Mycosphaerella populorum
SO2202]
Length = 1725
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 39/226 (17%)
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM-- 126
PI S + + + VPVIRV+G+ G+K CV VHG FPYLY+P+ + I E+
Sbjct: 47 PIWGPRSLSATQRVQLPDVPVIRVWGSTETGQKACVHVHGAFPYLYVPYV-DSIEESQVA 105
Query: 127 --LQQLAASIDKALNIALGYKDS-------VQHVFHISICKKFPMYGYHADERTFLKILL 177
+ L +SID AL L Y+ + V HIS+ K P +GY+ + +LKI L
Sbjct: 106 HYISNLRSSIDHAL--CLSYRRNPYDNPRNATFVAHISLVKGVPFFGYNVGYKYYLKIYL 163
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS--- 234
P HM++ DLL GA+ + FQPYE+H+ Y LQ+ D+NLYG + IE + FR+
Sbjct: 164 LNPLHMTRFADLLHQGAILRQHFQPYEAHLQYQLQWMCDFNLYGCAYIEVSKPHFRAPIP 223
Query: 235 -----------------DSE-----TSLPKLSHCQLEADVKAESIV 258
DS+ P+ SHCQLE D++ + I+
Sbjct: 224 RWEEMDDLAHLWHDRSIDSQHVLDADQFPRQSHCQLEVDIRVQDIL 269
>gi|67537238|ref|XP_662393.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|18031889|gb|AAL09153.1| polymerase zeta subunit [Emericella nidulans]
gi|40741169|gb|EAA60359.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|259482365|tpe|CBF76778.1| TPA: DNA polymerase (EC 2.7.7.7)
[Source:UniProtKB/TrEMBL;Acc:Q8X142] [Aspergillus
nidulans FGSC A4]
Length = 1681
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 107/206 (51%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE---PITETMLQQLAASIDKALNIAL 142
KVPVIR+FG G+K CV VHG FPYLY+ + + + + L SID AL A+
Sbjct: 39 KVPVIRIFGTTETGQKICVHVHGAFPYLYVQYDGDLSPDSVRSAARSLHLSIDHAL--AV 96
Query: 143 GYKDSVQH-----VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ + V HI++ K P YGYH R F KI L P ++++L DLLL GAV
Sbjct: 97 SYRRNAHDKKTVFVAHITLVKGVPFYGYHVGYRFFFKIYLLNPIYITRLADLLLQGAVMK 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD---------------------- 235
QPYESH+ Y+ Q+ DYNL+G + ++ KFRS
Sbjct: 157 RPIQPYESHLQYVPQWMCDYNLFGCAFMKCGKAKFRSPIPEYLDLPDLSHRWHDRSIPPG 216
Query: 236 ---SETSLPKLSHCQLEADVKAESIV 258
E+ LPK SHC LEADV + I+
Sbjct: 217 WILDESVLPKQSHCPLEADVCVQDIL 242
>gi|86196720|gb|EAQ71358.1| hypothetical protein MGCH7_ch7g765 [Magnaporthe oryzae 70-15]
Length = 1736
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 39/236 (16%)
Query: 60 YLYIPFHHEP-ITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
Y P ++P + + HS+L KVPVIRVFG+ G+K C +HG FPYL+I ++
Sbjct: 14 YQATPTQYDPCLRNDVRHSQL--FKEPKVPVIRVFGSTQTGQKVCAHIHGAFPYLFIEYN 71
Query: 119 HEPITETMLQ---QLAASIDKALNIALGY----KDSVQHVFHISICKKFPMYGYHADERT 171
+ E + +L SID AL ++ +D+ ++V I++ K P YG+H +
Sbjct: 72 GKLDQEEVGAFSYRLHLSIDHALAVSYRQDAYARDTPKYVARITLVKGVPFYGFHVGYKY 131
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
+LKI + P M++L DLL G + +FQPYE+H+ YILQF DYNLYG IE + VK
Sbjct: 132 YLKIYMLNPVVMTRLADLLHQGVIMKRKFQPYEAHLQYILQFMTDYNLYGCGYIEASSVK 191
Query: 232 FRS--------DSET---------------------SLPKLSHCQLEADVKAESIV 258
FR+ D ++ SLP+ SHC +E D+ + I+
Sbjct: 192 FRAPVPQIDDDDMDSVMTPHIWHNQSISQKQITDHHSLPRASHCPIEVDICVQDIL 247
>gi|119493035|ref|XP_001263773.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya
fischeri NRRL 181]
gi|119411933|gb|EAW21876.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya
fischeri NRRL 181]
Length = 1686
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 98/192 (51%), Gaps = 31/192 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
KVPVIR+FG G+K CV VHG FPYLYI + P+ LA + + Y
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYIEYDG-PLDPEQDHALALNYRRN-----AYD 92
Query: 146 DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
V HI++ K P YGYH R F KI L +P + ++L DLLL GAV QPYES
Sbjct: 93 KKTAFVAHITLVKGVPFYGYHVGYRFFFKIYLLDPVYTTRLADLLLQGAVLKRPLQPYES 152
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRS-------------------------DSETSL 240
H+ Y+ Q+ DYNLYG + ++ + VKFRS T L
Sbjct: 153 HLQYVPQWMCDYNLYGCAYMKCSRVKFRSPIPEYYELSNLSHRWHDRSIQPDCVSDATLL 212
Query: 241 PKLSHCQLEADV 252
PK SHC LEADV
Sbjct: 213 PKQSHCPLEADV 224
>gi|440633310|gb|ELR03229.1| hypothetical protein GMDG_01212 [Geomyces destructans 20631-21]
Length = 1742
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 37/240 (15%)
Query: 50 TCVFVHGVFPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGV 109
C+ + FP + P + + SE+ N KVPV+RVFG G+K C +HG
Sbjct: 9 NCIDHYQAFPTRFDP----QLRRDVAPSEINNE--PKVPVVRVFGTTETGQKVCAHIHGA 62
Query: 110 FPYLYIPFHHEPITETM---LQQLAASIDKALNIALG---YKDSVQHVFHISICKKFPMY 163
FPY+YI ++ + ++ + + +L SID AL ++ Y + + I++ K P Y
Sbjct: 63 FPYIYIDYNGQVTSDEVGAYIHRLHLSIDHALAVSYRRGVYDRRTRFIARITLVKGVPFY 122
Query: 164 GYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS 223
GYH + +LKI +P M++L DLL GA+ FQPYE+H+ +I+Q+ DYNLYG
Sbjct: 123 GYHVGYQYYLKIYALDPVVMTRLADLLRQGAIMKRVFQPYEAHLQFIMQWMTDYNLYGCG 182
Query: 224 NIEFNMVKFRSD-------------------------SETSLPKLSHCQLEADVKAESIV 258
I+ V FR SE LP++SHC LE D+ + I+
Sbjct: 183 YIDSRQVYFRGPVPKYEELDRLSHLWHDRSIPAEFVISEAKLPRVSHCSLEVDIMVQDIL 242
>gi|452837061|gb|EME39004.1| hypothetical protein DOTSEDRAFT_75635 [Dothistroma septosporum
NZE10]
Length = 1701
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 33/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
+VPVIRVFG+ G+K C VHG PYLY+ + + T + QL SID AL ++
Sbjct: 44 QVPVIRVFGSTETGQKVCAHVHGALPYLYVSYQESTDKQHVDTYISQLRNSIDHALALSY 103
Query: 143 G---YKDSVQHVF--HISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+D + F HIS+ K P +GY+ + +LKI L P HM++ DLL GA+
Sbjct: 104 RRNPYEDPRKSAFVAHISLVKGVPFFGYNVGFKYYLKIYLLNPMHMTRFSDLLQQGAILA 163
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----------------DSETS-- 239
+ FQPYE+H+ Y+LQ+ D+NLYG + IE + +FR D S
Sbjct: 164 QPFQPYEAHLQYLLQWMCDFNLYGCAYIEVDKPRFREPVPLWDELDDPAHLWHDRSISPD 223
Query: 240 -------LPKLSHCQLEADVKAESIV 258
P+ SHCQ+E D + E I+
Sbjct: 224 QILDIERYPRQSHCQIELDFRVEDIL 249
>gi|242813002|ref|XP_002486077.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714416|gb|EED13839.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1672
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 103/204 (50%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETMLQQLAASIDKALNIAL 142
KVPVIR FG G+K CV +HG FPYLYI + + ++ L SID AL +
Sbjct: 39 KVPVIRAFGATETGQKVCVHIHGAFPYLYIEYRGGLGQDEVNDAIRNLHKSIDHALANSY 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V +V HIS+ K P YGYH R +LKI L P ++ +L DLL GAV
Sbjct: 99 RHNAYDGRVAYVAHISLVKGIPFYGYHVGYRYYLKIYLLNPLNIIRLADLLRQGAVMKYP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QPYESH+ +I Q+ DYNLYG + ++ KFRS
Sbjct: 159 LQPYESHLQFIPQWMCDYNLYGCAYMDCAKAKFRSPVPEYLELSNLDHRWHDRTIPPEYI 218
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
SE LPK SHC LE DV + I+
Sbjct: 219 TSEAVLPKQSHCTLEVDVCVQDIL 242
>gi|425783247|gb|EKV21104.1| DNA polymerase [Penicillium digitatum Pd1]
Length = 1698
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G++ CV VHG FPYLYI ++ E + ++ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQRVCVHVHGAFPYLYIEYNGSLAPEDVNSAIRTLHLSIDHALAVSF 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V HI++ K P YGYH R F KI L P+H+++L DLL GAV
Sbjct: 99 RRNAYDRRTAFVAHITLVKGVPFYGYHVGWRFFFKIYLLSPFHITRLVDLLHQGAVMKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
QPYE+H+ YI Q+ DYNLYG + + + VKFR+
Sbjct: 159 LQPYEAHVQYIPQWMYDYNLYGCATMSCSQVKFRA 193
>gi|346320496|gb|EGX90096.1| DNA polymerase zeta catalytic subunit, putative [Cordyceps
militaris CM01]
Length = 1666
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
KVPVIR+FG+ G+K CV VHG FPYL+I + + + + +L SID AL+++
Sbjct: 39 KVPVIRIFGSTETGQKVCVHVHGAFPYLFIEYEGGLSQDEVGSFIFKLHLSIDHALSVSF 98
Query: 143 GYKD---SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
+ + + V I++ K P YGYH R FLKI +Y P M++L DLL GA+ ++
Sbjct: 99 RRDEQGLNSRFVARITLVKGVPFYGYHVGYRFFLKIYMYNPMVMTRLTDLLQQGAILKQK 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
FQPYE+H+ Y+ QF IDYNL+G ++ + FR+
Sbjct: 159 FQPYEAHLQYLSQFMIDYNLFGCDYLDASQTAFRAPVPAHNDGSNSSHLWHDLSIPPGRI 218
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
+ SLP++S C +E D+ + I+
Sbjct: 219 TDDHSLPRVSRCSIEVDICVQDII 242
>gi|342878035|gb|EGU79446.1| hypothetical protein FOXB_10031 [Fusarium oxysporum Fo5176]
Length = 1682
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 41/203 (20%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VPV+RVFG+ G+K C +HG FPYLY+ + S D+ +A+ Y+
Sbjct: 39 RVPVVRVFGSTETGQKVCAHIHGAFPYLYVEYEG-----------GLSPDEDHALAVSYR 87
Query: 146 -----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
DS + V I++ K P YG+H R FLKI ++ P M++L DLL G + +F
Sbjct: 88 RDQKGDSARFVARITLVKGVPFYGFHVGYRFFLKIYMFNPIVMTRLADLLQQGVIMKNKF 147
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-------------------------D 235
QPYE+H+ Y+LQF D+NLYG ++ ++ +FRS
Sbjct: 148 QPYEAHLQYLLQFMTDFNLYGCDYLDASVTRFRSPVPEYEQGSSSLHKWHSRSISVDHIT 207
Query: 236 SETSLPKLSHCQLEADVKAESIV 258
ET+LP+ SHC +E D+ + I+
Sbjct: 208 DETTLPRSSHCSIEVDICVQDII 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDP-VHSELRNLVIQK---VPVIRVFGNNIEGKKTCVFVHG 56
+F + + ID + + P + +DP + +++R I K VPV+RVFG+ G+K C +HG
Sbjct: 3 LFRVRLNCIDHYQATP-SRYDPQLRNDIRPSQISKGPRVPVVRVFGSTETGQKVCAHIHG 61
Query: 57 VFPYLYIPFH 66
FPYLY+ +
Sbjct: 62 AFPYLYVEYE 71
>gi|380093792|emb|CCC08756.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1959
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 112/209 (53%), Gaps = 38/209 (18%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH--EPI-TETMLQQLAASIDKALNIAL 142
K+PVIRVFG+ G+K C +HG FPYLY+ + E I + + ASID AL A+
Sbjct: 39 KLPVIRVFGSTETGQKVCAHIHGAFPYLYVEYDGSLEVIKANEYISKFRASIDHAL--AV 96
Query: 143 GYK-----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ D +V I++ K P YG+H R +LKI L+ P MS+L DLL G + +
Sbjct: 97 SYRKDPLHDRPLYVARITLTKGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMS 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----------DSET--------- 238
+FQPYE+H+ Y+LQF DYNLYG ++ MV FR+ D ET
Sbjct: 157 RKFQPYEAHLQYLLQFMADYNLYGCDYLDAAMVTFRAPVPKHDENINDHETGNRWDDATI 216
Query: 239 ---------SLPKLSHCQLEADVKAESIV 258
SLP+ SH LE D+ AE I+
Sbjct: 217 PSEFITDDYSLPRASHGSLEVDICAEDIL 245
>gi|425780984|gb|EKV18966.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1678
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE---TMLQQLAASIDKALNIAL 142
KVPVIR+FG G++ CV VHG FPYLYI ++ E + ++ L SID AL ++
Sbjct: 39 KVPVIRIFGATETGQRVCVHVHGAFPYLYIEYNGSLAPEDVNSAIRTLHLSIDHALAVSF 98
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y V HI++ K P YGYH R F KI L P+H+++L DLL GAV
Sbjct: 99 RRNAYDRRTAFVAHITLVKGVPFYGYHVGWRFFFKIYLLSPFHITRLVDLLHQGAVMKRP 158
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
QPYE+H+ YI Q+ DYNLYG + + + VKFR+
Sbjct: 159 LQPYEAHVQYIPQWMYDYNLYGCATMSCSQVKFRA 193
>gi|296088359|emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 50/236 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV++D++M+ PI D +S + ++++VPVIR++G+ G+KTC+ VH PY
Sbjct: 10 IFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+ P T+ + S ++ + H V
Sbjct: 70 LYV-----PCTDLMPQSP---------------------QEADTYTHAV----------- 92
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL--- 177
+ ++KAL + QHV S+ + YGYH+ E F+KI L
Sbjct: 93 ----------SLGVEKALKLKGNAGSKRQHVHGCSLVRAKNFYGYHSSEELFVKIYLNIS 142
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
Y P+ +S+ +LLL G+V ++ QP+ESHIP++LQF IDYNLYGM ++ + +KFR
Sbjct: 143 YHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLIDYNLYGMGHLHLSKMKFR 198
>gi|121704870|ref|XP_001270698.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
clavatus NRRL 1]
gi|119398844|gb|EAW09272.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
clavatus NRRL 1]
Length = 1654
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 99/201 (49%), Gaps = 37/201 (18%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL--- 142
KVPVIR+FG G+K CV VHG FPYLYI + L A D AL +
Sbjct: 39 KVPVIRIFGATETGQKVCVHVHGAFPYLYIEYDGP---------LNAEQDHALALNYRRN 89
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQP 202
Y V HI++ K P YGYH R F KI L P ++++L DLLL GAV FQP
Sbjct: 90 AYDKKTAFVAHITLVKGVPFYGYHVGYRFFFKIYLLNPVYVTRLADLLLQGAVLKRPFQP 149
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-------------------------DSE 237
YESH+ Y+ Q+ DYNLYG + ++ + KFRS
Sbjct: 150 YESHLQYVPQWMCDYNLYGCAYMKCSKAKFRSRIPELFELTDLSYRWHDRSIPPDCISDA 209
Query: 238 TSLPKLSHCQLEADVKAESIV 258
LPK SHC LE DV + I+
Sbjct: 210 AVLPKQSHCSLEVDVCVQDIL 230
>gi|297841441|ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
gi|297334443|gb|EFH64861.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
Length = 1899
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 64/245 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID++M+ PI +D
Sbjct: 10 VFSLRIVSIDYYMASPIPGYD--------------------------------------- 30
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--- 117
I +S + + +VPVIR++G+ G+KTC+ +H PYLYIP
Sbjct: 31 -------------ICYSSFQGGEVNEVPVIRIYGSTPAGQKTCLHIHRALPYLYIPCSEI 77
Query: 118 ---HHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLK 174
HH+ + L L+ ++KAL + QHV I + YGYH+ E F+K
Sbjct: 78 PLEHHKGADGSTLA-LSLELEKALKLKGNAASKRQHVHDCEIVRAKKFYGYHSTEEAFVK 136
Query: 175 ILLY-----EPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNM 229
I LY P +++ LLL GAV + QPYESHIP+ILQF +DYNLYGM ++ +
Sbjct: 137 IYLYPCNSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYGMCHVHISK 196
Query: 230 VKFRS 234
+KFRS
Sbjct: 197 MKFRS 201
>gi|336463563|gb|EGO51803.1| hypothetical protein NEUTE1DRAFT_125454 [Neurospora tetrasperma
FGSC 2508]
Length = 1928
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 107/210 (50%), Gaps = 40/210 (19%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ KVPVIRVFG+ +G+K C +HG FPYLY+ + L + D AL
Sbjct: 33 RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG---------NLEPNKDHALA 83
Query: 140 IALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
I+ +D ++V I++ K P YG+H R +LKI L+ P MS+L DLL G +
Sbjct: 84 ISYRKDPIRDRPKYVARITLTKGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIM 143
Query: 197 NERFQPYESHIPYILQFCIDYNLYGM------------------SNIEFNMVKFRSDSET 238
+ +FQPYE+H+ Y+LQF DYNLYG SNIE + D T
Sbjct: 144 SRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAIATFRAPVPKHDSNIEGRETEHHWDDAT 203
Query: 239 ----------SLPKLSHCQLEADVKAESIV 258
SLP+ SHC LE D+ E I+
Sbjct: 204 IPPELITDDYSLPRASHCSLEVDICVEDIL 233
>gi|88604876|gb|ABD46758.1| REV3 [Neurospora crassa]
Length = 1926
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 118/230 (51%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+ L + D AL I+ +D ++V IS+ K P YG++ R +LKI
Sbjct: 73 D---------LEPNKDHALAISYRKDPIRDRPKYVARISLTKGTPFYGFYVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL +G + + +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQHGVIMSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 AKHDSNIEGREAEHHWDDTTIPSELITDNYSLPRASHCSLEVDICVEDIL 233
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 9 IDFFMSKPIAHFDPVHSE----LRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
ID + + P +DP + R+ KVPVIRVFG+ +G+K C +HG FPYLY+
Sbjct: 11 IDHYQATPT-RYDPQFDQDVRFSRSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVE 69
Query: 65 F 65
+
Sbjct: 70 Y 70
>gi|88604880|gb|ABD46760.1| REV3 [Neurospora crassa]
Length = 1926
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 115/230 (50%), Gaps = 41/230 (17%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH 119
Y P ++P + V R+ KVPVIRVFG+ +G+K C +HG FPYLY+ +
Sbjct: 14 YQATPTRYDPQFDQDVRFS-RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG 72
Query: 120 EPITETMLQQLAASIDKALNIALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
L + D AL I+ +D ++V IS+ K P YG+H R +LKI
Sbjct: 73 ---------NLEPNKDHALAISYRKDPIRDRPKYVARISLTKGIPFYGFHVGYRFYLKIY 123
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS-- 234
L+ P MS+L DLL G + + FQPYE+H+ Y+LQF DYNLYG + ++ M FR+
Sbjct: 124 LFNPVVMSRLVDLLQQGVIMSRIFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPV 183
Query: 235 ----------------DSET----------SLPKLSHCQLEADVKAESIV 258
D T SLP+ SHC LE D+ E I+
Sbjct: 184 PKHDSNIEGRESEHYWDDTTIPPELITDNYSLPRASHCSLEVDICVEDIL 233
>gi|315047094|ref|XP_003172922.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311343308|gb|EFR02511.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1681
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 112/217 (51%), Gaps = 38/217 (17%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE---PITETMLQQLAA 132
SELR+ I KVPVIRVFG G+K C +HG PYLY+ + + T ++ L A
Sbjct: 31 ESELRSRSI-KVPVIRVFGATETGQKVCAHIHGALPYLYLEYKGDLNPAEVNTAIRTLHA 89
Query: 133 SIDKALNIALGYKD-----SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLE 187
SID AL AL Y+ S V +IS+ K P YGYH R + K+ L P HM++L
Sbjct: 90 SIDHAL--ALSYRRNPLDHSTAFVAYISLVKGIPFYGYHVGYRYYFKVYLLNPLHMTRLS 147
Query: 188 DLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------------- 233
D+L+ GAV QPYESH+ +I Q+ DYNL+G + I + +KFR
Sbjct: 148 DVLMQGAVMKRVLQPYESHLQFIPQWMCDYNLHGCAYINCSKIKFRPPVPSYINLESSDH 207
Query: 234 ------------SDSETSLPKLSHCQLEADVKAESIV 258
SD + P+ SHC +E D+ + I+
Sbjct: 208 LWHDESIPQQHISDPD-KFPRQSHCAIEVDIHVQDIL 243
>gi|78523225|gb|ABB46350.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 110/211 (52%), Gaps = 42/211 (19%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ KVPVIRVFG+ +G+K C +HG FPYLY+ + L + D AL
Sbjct: 33 RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG---------NLEPNKDHALA 83
Query: 140 IALGYKDSVQ----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
I+ KD ++ +V I++ K P YG+H R +LKI L+ P MS+L DLL G +
Sbjct: 84 ISY-RKDPIRDRPIYVARITLTKGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVI 142
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------DSE 237
+ +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+ D
Sbjct: 143 MSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPVPKHDSNIEGRETEHHWDDA 202
Query: 238 T----------SLPKLSHCQLEADVKAESIV 258
T SLP+ SHC LE D+ E I+
Sbjct: 203 TIPPELITDDYSLPRASHCSLEVDICVEDIL 233
>gi|451852202|gb|EMD65497.1| hypothetical protein COCSADRAFT_180252 [Cochliobolus sativus
ND90Pr]
Length = 1746
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 106/206 (51%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
+VPVIR FG G+K C +HG PYLY+ ++ + + + L SID+AL A
Sbjct: 75 EVPVIRAFGATETGQKVCAHIHGALPYLYLEYNGSLETDVVNSYILDLRTSIDQAL--AT 132
Query: 143 GYKDSV-----QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ S +V HIS+ K P +GYH + FLK+ L P HM++ DLL GA+ +
Sbjct: 133 AYRRSTLDGKSTYVGHISLVKGVPFFGYHVGYKVFLKVYLLNPMHMTRFADLLHQGAILD 192
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---DS------------------ 236
FQPYESH+ Y+LQ+ DYNLYG I+ V+FR DS
Sbjct: 193 RVFQPYESHLQYLLQWMCDYNLYGCDYIDCAKVQFRGPIPDSDEVDTTLHKWHNASIPTE 252
Query: 237 ----ETSLPKLSHCQLEADVKAESIV 258
E P+ SHC LE D+ + I+
Sbjct: 253 FIADEDQYPRQSHCTLEVDICVQDIL 278
>gi|350297217|gb|EGZ78194.1| hypothetical protein NEUTE2DRAFT_101866 [Neurospora tetrasperma
FGSC 2509]
Length = 1925
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 109/211 (51%), Gaps = 42/211 (19%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ KVPVIRVFG+ +G+K C +HG FPYLY+ + L D AL
Sbjct: 33 RSRKAAKVPVIRVFGSTDKGQKVCAHIHGAFPYLYVEYDG---------NLEPDKDHALA 83
Query: 140 IALGYKDSVQ----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
I+ KD ++ +V I++ K P YG+H R +LKI L+ P MS+L DLL G +
Sbjct: 84 ISY-RKDPIRDRPIYVARITLTKGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVI 142
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------DSE 237
+ +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+ D
Sbjct: 143 MSRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPVPKHDSNIEGRETEHHWDDA 202
Query: 238 T----------SLPKLSHCQLEADVKAESIV 258
T SLP+ SHC LE D+ E I+
Sbjct: 203 TIPPELITDDYSLPRASHCSLEVDICVEDIL 233
>gi|46129445|ref|XP_389074.1| hypothetical protein FG08898.1 [Gibberella zeae PH-1]
Length = 1681
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVP++R+FG G+K C +HG FPYLY+ + + + + +L SID AL A+
Sbjct: 39 KVPIVRIFGATETGQKVCAHIHGAFPYLYVEYEGGLSPDEVGAYIYRLHLSIDHAL--AV 96
Query: 143 GYK-----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ D+ + V I++ K P YG+H R FLKI ++ P M++L DLL G +
Sbjct: 97 SYRRDQKNDNARFVARITLVKGIPFYGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMK 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----------------------- 234
+FQPYE+H+ ++LQF D+NLYG +E + FRS
Sbjct: 157 HKFQPYEAHLQFLLQFMTDFNLYGCDYLESSSTGFRSPVPEYGEETNSSHLWHSESIPQE 216
Query: 235 --DSETSLPKLSHCQLEADVKAESIV 258
ET+LP+ SHC LE D+ ++I+
Sbjct: 217 DVTDETTLPRSSHCSLEVDICVQNIL 242
>gi|326529379|dbj|BAK01083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1715
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 49/233 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+ IV++D++M+ P+ D +S +++VPVIR++G+ G+KTC+ VH PY
Sbjct: 17 VLSVRIVSLDYYMAPPVPGLDISYSPFHCEEVEEVPVIRIYGSTPAGQKTCLHVHQALPY 76
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+ P E ++H N+E +C
Sbjct: 77 LYV-----PCPEELLH-------------------NIERGNSC----------------- 95
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEP 180
+ L + ++K L K +HV S+ + +YGYH+ E F+KI LY P
Sbjct: 96 ------MTGLLSDLEKTLQNRGPAKR--RHVHGCSLVRAKKLYGYHSSEEIFVKIYLYYP 147
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ +S+ LL GAV + FQPYESHIPY+L F IDYNLYGM ++ KFR
Sbjct: 148 HEVSRAATHLLGGAVLDRVFQPYESHIPYLLHFLIDYNLYGMGHVHVTDFKFR 200
>gi|406868498|gb|EKD21535.1| DNA polymerase zeta catalytic subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 2719
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 35/200 (17%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVPVIRVFG G+K C +HG FPYLY+ ++ I + + + +L SID AL A+
Sbjct: 39 KVPVIRVFGATETGQKVCAHIHGAFPYLYVEYNGSLIEDDVGAYIHRLHLSIDFAL--AV 96
Query: 143 GYK-----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ D+ + V I++ K P YG+H R +LKI + P M++L DLL G +
Sbjct: 97 SYRRNVSDDNAKFVARITLVKGIPFYGFHVGYRFYLKIYMLNPMVMTRLGDLLRQGIIMK 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR----------------------SD 235
+ FQPYE+H+ Y+LQ+ DYNLYG I+ V FR +D
Sbjct: 157 KVFQPYEAHLQYLLQWMADYNLYGCGYIDCGKVTFRGPVPKYDELDNISHLWHDRSIPAD 216
Query: 236 S---ETSLPKLSHCQLEADV 252
S E+ LP++SHC LE D+
Sbjct: 217 SVSDESELPRVSHCSLEVDI 236
>gi|452986752|gb|EME86508.1| hypothetical protein MYCFIDRAFT_131051 [Pseudocercospora fijiensis
CIRAD86]
Length = 1594
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 35/206 (16%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAA---SIDKALNIALG 143
VPVIRVFG+ G+K C + G FPYLY+P+ + + + ++ SID AL ++
Sbjct: 45 VPVIRVFGSTETGQKVCCHIRGAFPYLYVPYTESIANDDVARYISTFRHSIDHALALSYR 104
Query: 144 ---YKDSVQHVF--HISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
Y D + F HIS+ K P +GY+ + FLK+ L P HM++ DLL GA+ +
Sbjct: 105 RNPYDDPRKATFVAHISLVKGVPFFGYNVGHKYFLKVYLLNPLHMTRFSDLLQQGAILRQ 164
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------ 234
FQPYE+H+ Y+LQ+ D+NLYG + IE +FR+
Sbjct: 165 LFQPYEAHLQYLLQWMCDFNLYGCAYIESKKPRFRAPLPAWEELDDPAHLWHDHSILPRN 224
Query: 235 --DSETSLPKLSHCQLEADVKAESIV 258
D++ P+ SHCQLE D+ E I+
Sbjct: 225 VLDAD-KFPRQSHCQLELDLCVEDIL 249
>gi|398388499|ref|XP_003847711.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
gi|339467584|gb|EGP82687.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
Length = 1595
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 35/207 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETMLQQLAASIDKALNIAL 142
+VPVIRVFG G+K C +HG FPYLY+P+ + E+ + SID AL I+
Sbjct: 43 QVPVIRVFGATETGQKVCAHIHGAFPYLYVPYTESIEKNTLESYISTFRHSIDHALAISY 102
Query: 143 G---YKDSVQHVF--HISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y++ F HIS+ K P +GY+ + +LK+ L P +M++ DLL GA+
Sbjct: 103 RRNPYENPRNATFVAHISLVKGVPFFGYNVGHKYYLKVYLLNPTNMTRFTDLLQQGAIMK 162
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----------------------- 234
+ FQPYE+H+ Y+LQ+ D+NLYG + IE FRS
Sbjct: 163 QVFQPYEAHLQYLLQWMCDFNLYGCAYIETEKPHFRSPLPEWEDLDDPAHLWHDRSVAEK 222
Query: 235 ---DSETSLPKLSHCQLEADVKAESIV 258
D E P+ SHCQLE D++ E ++
Sbjct: 223 DVLDVE-RFPRQSHCQLELDIRVEDLL 248
>gi|78523223|gb|ABB46349.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 107/210 (50%), Gaps = 40/210 (19%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ KVPVIRVFG+ +G+K C +HG PYLY+ + L D AL
Sbjct: 33 RSRKAAKVPVIRVFGSTDKGQKVCAHIHGASPYLYVEYDG---------NLEPDKDHALA 83
Query: 140 IALGY---KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
I+ +D ++V I++ K P YG+H R +LKI L+ P MS+L DLL G +
Sbjct: 84 ISYRKDPIRDRPKYVARITLTKGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIM 143
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------DSET 238
+ +FQPYE+H+ Y+LQF DYNLYG + ++ M FR+ D T
Sbjct: 144 SRKFQPYEAHLQYLLQFMADYNLYGCNYLDAAMATFRAPVPKHDSNIEGRETEHHWDDAT 203
Query: 239 ----------SLPKLSHCQLEADVKAESIV 258
SLP+ SHC LE D+ E I+
Sbjct: 204 IPPELITDDYSLPRASHCSLEVDICVEDIL 233
>gi|400595538|gb|EJP63333.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1672
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 117/229 (51%), Gaps = 38/229 (16%)
Query: 71 TETIVHSELRNLVIQ-------KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HE 120
T TI +LRN + KVP+IR+FG+ G+K C VHG FPYL++ + +
Sbjct: 17 TPTIHDPQLRNDIRPSQAARGPKVPIIRIFGSTETGQKVCAHVHGAFPYLFVEYEGGLSQ 76
Query: 121 PITETMLQQLAASIDKALNIALGYKD---SVQHVFHISICKKFPMYGYHADERTFLKILL 177
+ + +L SID AL+++ + + + V I++ K P YGYH R FLKI +
Sbjct: 77 DEVGSFIYRLHLSIDHALSVSFRRDEQGLNSRFVARITLVKGVPFYGYHVGYRFFLKIYM 136
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS--- 234
+ P M++L DLL GA+ ++FQPYE+H+ Y+ QF IDYNL+G ++ FR+
Sbjct: 137 FNPMVMTRLADLLQQGAILKQKFQPYEAHLQYLSQFMIDYNLFGCDYMDAAQAAFRAPVP 196
Query: 235 ----------------------DSETSLPKLSHCQLEADVKAESIVVDM 261
+ SLP++S C +E D+ + I M
Sbjct: 197 AHNVGSNSSHLWHDLSIPQGRITDDHSLPRVSRCSIEVDICVQDITNRM 245
>gi|388579508|gb|EIM19831.1| hypothetical protein WALSEDRAFT_58541 [Wallemia sebi CBS 633.66]
Length = 1504
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 12/202 (5%)
Query: 77 SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAAS 133
S +L + P++RVFG G+ C VHGV+PY YI + H E + + QL S
Sbjct: 24 SSFSDLPLANSPILRVFGRLDTGQMACAHVHGVYPYFYIEYKHSVTPEKVRDYIHQLGLS 83
Query: 134 IDKALNIAL-----GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
I+++L+++L + + Q + I ICK P YGY+ R FLKI++ +P H+ +L
Sbjct: 84 INQSLSLSLRRNMNDKQSTTQFLRAIVICKGTPFYGYNVGTRPFLKIIMNDPKHIPRLVQ 143
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
L+ +G + N FQ YESH PY+LQF DYNLYG ++ + KFR LP
Sbjct: 144 LMESGQLMNTTFQAYESHAPYLLQFFTDYNLYGCDWMQVSQAKFR----LPLPDPPITDW 199
Query: 249 EADVKAESIVVDMAANDSDVAT 270
+ + +S V + N+ D T
Sbjct: 200 DNESAQDSTVNSFSINEGDTHT 221
>gi|330926967|ref|XP_003301686.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
gi|311323405|gb|EFQ90238.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
Length = 1692
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 107/206 (51%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIAL 142
+VPVIR FG G+K C +HG PYLY+ ++ + + ++ + L SID AL A
Sbjct: 39 QVPVIRAFGATETGQKVCAHIHGALPYLYLEYNGDLEKHVVDSYIVDLRTSIDHAL--AS 96
Query: 143 GYKDSVQ-----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ + +V HI++ K P +GY +TFLK+ + P HM++ DLL GA+ N
Sbjct: 97 AYRRNACDGKSIYVGHITLVKGVPFFGYSVGYKTFLKVYMLNPMHMTRFADLLHQGAILN 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---DSET---------------- 238
FQPYESH+ YILQ+ DYNLYG I+ V+FR DSE
Sbjct: 157 RVFQPYESHLQYILQWMCDYNLYGCDYIDCAKVQFRGPVPDSEEIDTTVHKWHDASIPNE 216
Query: 239 ------SLPKLSHCQLEADVKAESIV 258
P+ SHC LE D+ + I+
Sbjct: 217 LMAEADQYPRQSHCTLEVDICVQDIL 242
>gi|407918361|gb|EKG11632.1| hypothetical protein MPH_11125 [Macrophomina phaseolina MS6]
Length = 1629
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETMLQQLAASIDKALNIAL 142
+VPV+R FG G+K C +HG PYLY+ ++ + + +Q+L SID AL ++
Sbjct: 40 QVPVVRAFGATETGQKVCAHIHGALPYLYLEYNESLEQDAVDAYIQRLRISIDHALAVSY 99
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y + V HI++ K P +GYH + FLK+ L P +MS+L DLL GA+ +
Sbjct: 100 RRNAYDGKSRFVAHITLVKGVPFFGYHVGYKFFLKVYLLNPLNMSRLADLLQQGAILAKV 159
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QP+ESH+ Y+LQ+ DYNLYG + I+ VKFRS
Sbjct: 160 MQPHESHLQYLLQWMCDYNLYGCAYIDCAKVKFRSPVPDYLDMNNPAHKWHDRSISPDWI 219
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
+P+ SHC +E DV + I+
Sbjct: 220 SDNDDVPRQSHCAVEVDVCVQDIL 243
>gi|154291721|ref|XP_001546441.1| hypothetical protein BC1G_15151 [Botryotinia fuckeliana B05.10]
Length = 1710
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 109/206 (52%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-----HEPITETMLQQLAASIDKALNI 140
KVPVIRVFG+ G+K C +HG FPYLYI + HE + + +L SID AL +
Sbjct: 42 KVPVIRVFGSTETGQKVCAHIHGAFPYLYIEYEGSLDPHE--VGSYIHRLHLSIDYALAV 99
Query: 141 AL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
+ Y + + V I++ K P YG+H R +LKI + P M++L D+L G V
Sbjct: 100 SYRRNAYDGNAKFVARITLVKAVPFYGFHVGYRFYLKIYMLNPVVMTRLADILRQGTVMK 159
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD----SETS-------------- 239
FQPYE+H+ ++LQ+ DYNLYG I+ + FR +ETS
Sbjct: 160 RVFQPYEAHLQFLLQWMADYNLYGCGYIDSSKATFRGPVPLYNETSSSMHLWHDRSIPDQ 219
Query: 240 -------LPKLSHCQLEADVKAESIV 258
LP++SHC LE D+ ++I+
Sbjct: 220 LITNDVYLPRVSHCSLEVDICVQNIL 245
>gi|347840175|emb|CCD54747.1| similar to DNA polymerase zeta catalytic subunit [Botryotinia
fuckeliana]
Length = 1707
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 109/206 (52%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-----HEPITETMLQQLAASIDKALNI 140
KVPVIRVFG+ G+K C +HG FPYLYI + HE + + +L SID AL +
Sbjct: 39 KVPVIRVFGSTETGQKVCAHIHGAFPYLYIEYEGSLDPHE--VGSYIHRLHLSIDYALAV 96
Query: 141 AL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
+ Y + + V I++ K P YG+H R +LKI + P M++L D+L G V
Sbjct: 97 SYRRNAYDGNAKFVARITLVKAVPFYGFHVGYRFYLKIYMLNPVVMTRLADILRQGTVMK 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD----SETS-------------- 239
FQPYE+H+ ++LQ+ DYNLYG I+ + FR +ETS
Sbjct: 157 RVFQPYEAHLQFLLQWMADYNLYGCGYIDSSKATFRGPVPLYNETSSSMHLWHDRSIPDQ 216
Query: 240 -------LPKLSHCQLEADVKAESIV 258
LP++SHC LE D+ ++I+
Sbjct: 217 LITNDVYLPRVSHCSLEVDICVQNIL 242
>gi|408392217|gb|EKJ71575.1| hypothetical protein FPSE_08214 [Fusarium pseudograminearum CS3096]
Length = 1696
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 35/206 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
KVP++R+FG G+K C +HG FPYLY+ + + + + + SID AL A+
Sbjct: 39 KVPIVRIFGATETGQKVCAHIHGAFPYLYVEYEGGLSPDEVGAYIYRFHLSIDHAL--AV 96
Query: 143 GYK-----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
Y+ D+ + V I++ K P +G+H R FLKI ++ P M++L DLL G +
Sbjct: 97 SYRRDQKNDNARFVARITLVKGIPFFGFHVGYRFFLKIYMFNPVVMTRLADLLQQGVIMK 156
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----------------------- 234
+FQPYE+H+ ++LQF D+NLYG +E + FRS
Sbjct: 157 HKFQPYEAHLQFLLQFMTDFNLYGCDYLESSSTGFRSPVPEYGEETNSSHLWHSESIPQE 216
Query: 235 --DSETSLPKLSHCQLEADVKAESIV 258
ET+LP+ SHC LE D+ + I+
Sbjct: 217 DVTDETTLPRSSHCSLEVDICVQDIL 242
>gi|336264642|ref|XP_003347097.1| hypothetical protein SMAC_05396 [Sordaria macrospora k-hell]
Length = 1947
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 106/206 (51%), Gaps = 44/206 (21%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
K+PVIRVFG+ G+K C +HG FPYLY+ + L D AL A+ Y+
Sbjct: 39 KLPVIRVFGSTETGQKVCAHIHGAFPYLYVEYDG---------SLEVIKDHAL--AVSYR 87
Query: 146 -----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
D +V I++ K P YG+H R +LKI L+ P MS+L DLL G + + +F
Sbjct: 88 KDPLHDRPLYVARITLTKGIPFYGFHVGYRFYLKIYLFNPVVMSRLVDLLQQGVIMSRKF 147
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS----------DSET------------ 238
QPYE+H+ Y+LQF DYNLYG ++ MV FR+ D ET
Sbjct: 148 QPYEAHLQYLLQFMADYNLYGCDYLDAAMVTFRAPVPKHDENINDHETGNRWDDATIPSE 207
Query: 239 ------SLPKLSHCQLEADVKAESIV 258
SLP+ SH LE D+ AE I+
Sbjct: 208 FITDDYSLPRASHGSLEVDICAEDIL 233
>gi|171676135|ref|XP_001903021.1| hypothetical protein [Podospora anserina S mat+]
gi|170936133|emb|CAP60793.1| unnamed protein product [Podospora anserina S mat+]
Length = 1751
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 61/288 (21%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQK---VPVIRVFGNNIEGKKTCVFVHGVF 58
F + + ID + + P + + + R K +PV+RVFG+ G+K C +HG F
Sbjct: 4 FRVRLNCIDHYQATPTRYDPQLRKDYRASQAAKEPKLPVVRVFGSTETGQKVCAHIHGAF 63
Query: 59 PYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH 118
PYLY+ + P+ + + + +L Q P T V
Sbjct: 64 PYLYVEYRG-PLEKKLGKAACHSLNAQDGP-----------SDTAV-------------- 97
Query: 119 HEPITETMLQQLAASIDKALNIALGYKDSVQH---VFHISICKKFPMYGYHADERTFLKI 175
++E +L +L ASID+AL ++ V I++ K P YG+H R +LK+
Sbjct: 98 ---VSEFIL-KLHASIDQALAVSYRRDRDRDRSRFVARITLVKGVPFYGFHVGYRFYLKL 153
Query: 176 LLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS- 234
+ P M++L DLL G++ N +FQPYE+H+ ++LQF DYNLYG IE V+FRS
Sbjct: 154 YMLNPLVMTRLADLLQQGSIMNRKFQPYEAHLQFLLQFMTDYNLYGCDYIEVGNVRFRSP 213
Query: 235 --------------DSET----------SLPKLSHCQLEADVKAESIV 258
DS T LP+ SHC++E D+ + I+
Sbjct: 214 IPGPAGPEDAPRIWDSNTIPPQFITDDFELPRSSHCEIEVDICVQDIL 261
>gi|164662395|ref|XP_001732319.1| hypothetical protein MGL_0094 [Malassezia globosa CBS 7966]
gi|159106222|gb|EDP45105.1| hypothetical protein MGL_0094 [Malassezia globosa CBS 7966]
Length = 1491
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 76/226 (33%), Positives = 114/226 (50%), Gaps = 17/226 (7%)
Query: 81 NLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH--EPITET------------- 125
N + +VPVIR +G G++ C+ VH VFPYLYI +H EP T
Sbjct: 37 NGCLPRVPVIRAYGATRHGQRCCLHVHNVFPYLYIEYHGSLEPTNGTCQIRGFADPDVVL 96
Query: 126 -MLQQLAASIDKALNIALGYKDSVQHVFH-ISICKKFPMYGYHADERTFLKILLYEPYHM 183
+ +L ++ A+ +L + +H I +CK P YGYH +LKI +P
Sbjct: 97 DYIDELGHAVQTAIAASLRLSPTRKHFLAAIHLCKGTPFYGYHVRPAYYLKISYVDPAIR 156
Query: 184 SKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKL 243
+L LL G V N FQPYE+H+ Y LQ+ +DYN+YG + V +RS + ++P+
Sbjct: 157 HRLRALLEQGHVLNTVFQPYEAHVQYHLQWMMDYNVYGCDWMHIESVSYRSSVDKAVPQD 216
Query: 244 SHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAI 289
S+C +EAD A SI + S+ S D ++ S+RA+
Sbjct: 217 SYCAVEADTWAHSIKNRRYIHASEPGGSQPSLNVQEDPVVPSLRAL 262
>gi|449302023|gb|EMC98032.1| hypothetical protein BAUCODRAFT_120942 [Baudoinia compniacensis
UAMH 10762]
Length = 1737
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 106/210 (50%), Gaps = 40/210 (19%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAA---SIDKALNIALG 143
VP+IRVFG G+K C +HG PYL I + P + + + +A SID AL AL
Sbjct: 78 VPIIRVFGATETGQKVCAHIHGALPYLLISYAGSPDADQVEKYIATVRHSIDHAL--ALS 135
Query: 144 YKDS--------VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
Y+ + V HIS+ K P +GY+ R +LKI L P HM++ DLLL GA+
Sbjct: 136 YRRNPYDNNARNSTFVAHISLVKGVPFFGYNVGYRYYLKIYLLNPLHMTRFADLLLQGAI 195
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS------------------- 236
++ QPYE+H+ ++LQ+ D+NLYG + IE K R +
Sbjct: 196 LHQVIQPYEAHLQFLLQWMCDFNLYGCAYIEVKAEKVRWRAPVPEFEELENPGHFWHDRS 255
Query: 237 --------ETSLPKLSHCQLEADVKAESIV 258
E P+ SHCQLE D++ E I+
Sbjct: 256 IPPGSILDEQRYPRQSHCQLELDIRVEDIL 285
>gi|396467820|ref|XP_003838034.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
gi|312214599|emb|CBX94590.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
Length = 1679
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 109/230 (47%), Gaps = 32/230 (13%)
Query: 60 YLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH- 118
Y P +P I R L +VPVIR FG G+K C +HG PYL++ +
Sbjct: 14 YQATPTDLDPPLRRITGPNSR-LSAPQVPVIRAFGATETGQKVCAHIHGALPYLFLEYSG 72
Query: 119 --HEPITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFL 173
E + E + L ASID AL + +V +IS+ K P +GY+ + FL
Sbjct: 73 SLEEHVVEAYIAALRASIDHALAATYRRNAFDGKSVYVGYISLIKGVPFFGYNVGYKVFL 132
Query: 174 KILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
KI + P HM++ DLL GA+ N FQPYE+H+ Y+LQ+ DYNLYG I V+FR
Sbjct: 133 KIYILNPMHMTRFADLLHQGAILNRVFQPYEAHLQYLLQWMCDYNLYGCDYINCAKVQFR 192
Query: 234 S---DSET----------------------SLPKLSHCQLEADVKAESIV 258
DS+ P+ SHC LE D+ + I+
Sbjct: 193 GPVPDSDEVDTKVHKWHDASIPDTFIAEDDQYPRQSHCTLEVDICVQDIL 242
>gi|405950503|gb|EKC18487.1| DNA polymerase zeta catalytic subunit [Crassostrea gigas]
Length = 3716
Score = 127 bits (319), Expect = 9e-27, Method: Composition-based stats.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 26/165 (15%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
+ +++ R V++KVPVIRVFG+ +G+K C+ VHGVFPYLY+ + + L+ A S
Sbjct: 67 VQYADFRASVVKKVPVIRVFGSTPQGQKACMHVHGVFPYLYVLYDGTQPWDRYLRLFANS 126
Query: 134 IDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
+DKA+N+A G + QHV+ I++ DLLL
Sbjct: 127 LDKAINVAQGNASAETQHVYKINMVSGIA-------------------------ADLLLG 161
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
GAV N+ FQP+ESHIPY LQ IDYNLYGM+ + VKFR ++
Sbjct: 162 GAVLNKGFQPHESHIPYTLQMFIDYNLYGMNMLNVAAVKFRRKAQ 206
>gi|357511977|ref|XP_003626277.1| DNA polymerase [Medicago truncatula]
gi|355501292|gb|AES82495.1| DNA polymerase [Medicago truncatula]
Length = 1096
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 75/261 (28%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV++D +M+ PI D HS + +VPVIRV+G+ G+KTC+ +HG PY
Sbjct: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+ P+ + EG Y Y+
Sbjct: 70 LYVSCSDIPLQL-----------------------DQEGD----------AYTYM----- 91
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYE- 179
+A+S++KAL + S QHV S+ + YGY + E F+KI LY
Sbjct: 92 ---------VASSLEKALKLKGSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLYPD 142
Query: 180 ---------PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQF----------------- 213
P +S+ +LLL GAV N+ QP+ESHIP+ILQF
Sbjct: 143 VLHILHKYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVCTLIRGLGITETYYS 202
Query: 214 -CIDYNLYGMSNIEFNMVKFR 233
C+DYNLYGM ++ + ++FR
Sbjct: 203 LCVDYNLYGMGHLHLSKMRFR 223
>gi|378734453|gb|EHY60912.1| DNA polymerase zeta subunit [Exophiala dermatitidis NIH/UT8656]
Length = 1773
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
++ VIRVFG G+K + +HG Y YI + + E + ++ L SID AL ++
Sbjct: 42 RISVIRVFGATETGQKVLMHIHGALQYTYIEYSGSLVREDVDVAIRTLQLSIDHALAVSY 101
Query: 143 G---YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+ ++V HIS+ K P YG+H R +LKI L P HM++L DLL GAV
Sbjct: 102 RKNIYEGKHRYVAHISLVKGIPFYGFHVGYRFYLKIYLLNPLHMTRLADLLREGAVMKRV 161
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS------------------------- 234
QP+ESH+ Y+ Q+ DYNLYG IE KFR
Sbjct: 162 LQPHESHLQYLAQWMCDYNLYGCGYIECEKFKFRGPVPRYHEMNSLLHQWHDHSIPPEFV 221
Query: 235 DSETSLPKLSHCQLEADVKAESIV 258
E +LPK SHC LE DV + I+
Sbjct: 222 SDEAALPKQSHCALEVDVHVKDIL 245
>gi|402084631|gb|EJT79649.1| hypothetical protein GGTG_04733 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 524
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 106/216 (49%), Gaps = 46/216 (21%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAA-------SIDKAL 138
+VPV+ VFG+ G+K C +HG FPYL++ + P T + A SID AL
Sbjct: 39 RVPVVLVFGSTETGQKVCAHIHGAFPYLFVEY---PGTLAASTNIGAYIYSLHLSIDHAL 95
Query: 139 NIALGYK-----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
++ K D ++V I++ K P YG+H + +LKI + P +S+L DLL G
Sbjct: 96 AVSYRQKVVHGRDPPKYVARITLVKGVPFYGFHVGYKFYLKIYMLNPAVISRLADLLHQG 155
Query: 194 AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------------------- 233
+ RFQPYE+H+ Y+LQF DYNLYG + +E FR
Sbjct: 156 VIMKRRFQPYEAHLQYLLQFMTDYNLYGCAYLEAGKFSFRTPVPQFADDHDHVPQESAHI 215
Query: 234 -----------SDSETSLPKLSHCQLEADVKAESIV 258
+D + SLP+ SHC +E D+ E I+
Sbjct: 216 WHSRSIRPALITDDDCSLPRASHCAIEVDICVEDIL 251
>gi|213401351|ref|XP_002171448.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
gi|211999495|gb|EEB05155.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
Length = 1464
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 109/199 (54%), Gaps = 10/199 (5%)
Query: 64 PFHHEP--ITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---H 118
P H P + E + S + +PV+R+FG G C F+H FPYL+I F
Sbjct: 14 PLHSAPAFVKEDCLTSTRFSTKQVSLPVLRIFGLTEAGDSICCFLHNCFPYLFIDFVPEE 73
Query: 119 HEPITETMLQQLAASIDKALNIALGYKDS-VQHVFHISICKKFPMYGYHADERTFLKILL 177
H+ + + L+QL I++ L+ +L +S VQ V++I + K P YGYH R F KI L
Sbjct: 74 HDDLIQ-FLKQLKQFIEETLSRSLHLDNSRVQLVYNIQLVKGIPFYGYHVGWRLFCKISL 132
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSD 235
+ P H++KL DL G + + YE+H+PY+LQF ID+NLYG +E N ++ +D
Sbjct: 133 FNPNHINKLADLFRQGRILKNSTRVYEAHVPYLLQFLIDHNLYGCDCMELDENRIELVTD 192
Query: 236 SETSLPKLSHCQLEADVKA 254
ET S C+L A V A
Sbjct: 193 KETRKTHCS-CELVASVTA 210
>gi|302419923|ref|XP_003007792.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261353443|gb|EEY15871.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1611
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 13/177 (7%)
Query: 71 TETIVHSELRNLV-------IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH---HE 120
T T +LRN V KVP++R FG+ G+K C +HG FPY+Y+ + +
Sbjct: 17 TSTRFDPQLRNDVHPSQAAKGPKVPIVRAFGSTETGQKVCAHIHGAFPYMYVEYSGSLEQ 76
Query: 121 PITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILL 177
+ +L SID AL ++ Y + + V I++ K P YG+H R FLKI +
Sbjct: 77 DEVGAYIYRLHLSIDHALAVSYRRDQYSRNAKFVARITLVKGIPFYGFHVGYRFFLKIYM 136
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
+ P M++L DL G + +FQPYE+H+ Y+LQF D+NLYG ++ + V FR+
Sbjct: 137 FNPIVMTRLADLFQQGVIMKRKFQPYEAHLQYLLQFMTDFNLYGCGFLDASTVHFRA 193
>gi|330793739|ref|XP_003284940.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
gi|325085156|gb|EGC38569.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
Length = 2213
Score = 120 bits (302), Expect = 9e-25, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 127/242 (52%), Gaps = 16/242 (6%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
F + IV ID++ S+P+ D S L I +VP++R+FG+ G+K C+ +H +FPY
Sbjct: 15 FGVRIVDIDYYQSRPVKELDITISPLDGNEIYEVPILRIFGSTPAGQKCCLHLHQLFPYF 74
Query: 62 YIPFHHEPITETIVHSELRNLVIQK-VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+I + + +++ N I+K V + + NN +F + ++
Sbjct: 75 FIEY------DGSLNTSYVNTFIKKLVSSLNLALNN------SIFNNNNNNNNNNNNNNN 122
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEP 180
+ D ++ K Q++F+ + + P YGYH+ ++ F+K+ L+ P
Sbjct: 123 NNNNNNNNNNNNNTDNQPHVQFNKK---QYIFNAKLVRGRPFYGYHSTDKIFIKLYLFNP 179
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL 240
++++ LL +G++ N F+ +ESHIP++LQ +DYNL GMS IEF+ FR+ ++L
Sbjct: 180 DDINRISALLKSGSIMNREFRVFESHIPFVLQVFLDYNLSGMSYIEFSKACFRTPLPSNL 239
Query: 241 PK 242
K
Sbjct: 240 KK 241
>gi|345565978|gb|EGX48925.1| hypothetical protein AOL_s00079g146 [Arthrobotrys oligospora ATCC
24927]
Length = 1683
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 30/202 (14%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKAL-NIAL 142
+P++RVFG G+K C +HG FPYLY+ + + + + +L AS+D AL I
Sbjct: 40 LPILRVFGATETGQKVCAHIHGAFPYLYVEYEGSLAQDDVGAYIYRLHASLDHALCKIYR 99
Query: 143 GYKDSVQHVF--HISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
++VF I++CK P +G+H +LKI L P +++ DLL +GA+ ++F
Sbjct: 100 RNPHDPKNVFVARITLCKGVPFFGFHVGWTYYLKIYLLNPSLTTRVSDLLRSGAILKKQF 159
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET---------------------- 238
QPYE+H+ YI Q+ IDYNLYG I + V FR T
Sbjct: 160 QPYEAHLQYIPQWMIDYNLYGCGYINCSKVYFRQPIPTEEEAGEAHIWHTSTINRADVLD 219
Query: 239 --SLPKLSHCQLEADVKAESIV 258
P++SHC LE D++ I+
Sbjct: 220 DLEFPRISHCSLEIDIRVSDIL 241
>gi|444709084|gb|ELW50116.1| DNA polymerase zeta catalytic subunit [Tupaia chinensis]
Length = 3196
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P M ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMMKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|426234529|ref|XP_004011248.1| PREDICTED: DNA polymerase zeta catalytic subunit [Ovis aries]
Length = 3056
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP 241
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR S P
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFRKARRKSDP 113
>gi|19114980|ref|NP_594068.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74625273|sp|Q9P6L6.1|DPOZ_SCHPO RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|7768485|emb|CAB90776.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe]
Length = 1480
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 22/190 (11%)
Query: 81 NLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM-------LQQLAAS 133
N + VPVIRVFG N E + C F+H VFPY+Y+ + ET+ L QL S
Sbjct: 30 NEELTTVPVIRVFGLNEEAETVCCFIHNVFPYIYVEYSS--FAETLDLEVPDFLSQLQTS 87
Query: 134 IDKALNIAL-----GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
I+ AL +A YK +VQ V + K P YGY + FLKI L+ P + +L D
Sbjct: 88 INYALALAARANPETYKPAVQSV---QLVKGIPFYGYSFCFQKFLKICLFSPKNRDRLVD 144
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
L GA+ N+ Q YESH+PY+LQF +D+NLYG + I+ + + D LS C +
Sbjct: 145 LFRQGAILNKVIQVYESHLPYLLQFMVDHNLYGCAPIDLDDSIIKRDD-----LLSFCNV 199
Query: 249 EADVKAESIV 258
E V +I+
Sbjct: 200 EVHVSPNAIL 209
>gi|149032985|gb|EDL87826.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Rattus norvegicus]
Length = 3054
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MALSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|403289777|ref|XP_003936019.1| PREDICTED: DNA polymerase zeta catalytic subunit [Saimiri
boliviensis boliviensis]
Length = 3052
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 20/170 (11%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR--------------- 105
Query: 249 EADVKAESIVVDMAAND--SDVATSGGITRYLSDVLLNSMRAILLGQEPH 296
+A K++++ + + S + +G + R+ D + +S+ +L G EP
Sbjct: 106 KARRKSDTLHASGSCKNRLSGNSVAGTLFRWEQDEIPSSL--VLEGVEPQ 153
>gi|354485585|ref|XP_003504964.1| PREDICTED: DNA polymerase zeta catalytic subunit [Cricetulus
griseus]
Length = 3050
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|9957534|gb|AAG09402.1|AF179428_1 DNA polymerase zeta catalytic subunit variant 1 [Homo sapiens]
gi|9957536|gb|AAG09403.1|AF179429_1 DNA polymerase zeta catalytic subunit variant 2 [Homo sapiens]
gi|50345290|gb|AAT74627.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens]
gi|119568678|gb|EAW48293.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast),
isoform CRA_b [Homo sapiens]
Length = 3052
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|397503275|ref|XP_003822254.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 2 [Pan
paniscus]
gi|397503277|ref|XP_003822255.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 3 [Pan
paniscus]
Length = 3052
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|332213029|ref|XP_003255622.1| PREDICTED: DNA polymerase zeta catalytic subunit [Nomascus
leucogenys]
Length = 3051
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|3378172|gb|AAC28460.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
Length = 3052
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|2665742|gb|AAB88486.1| DNA polymerase zeta [Homo sapiens]
Length = 3052
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 130 LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+A SID+ALN+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPTMVKRICE 60
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 61 LLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 105
>gi|358055684|dbj|GAA98029.1| hypothetical protein E5Q_04709 [Mixia osmundae IAM 14324]
Length = 1838
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 18/170 (10%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE---PITETMLQQLA----ASIDK 136
+ KVP IRVFG+ +G++ CV VHGVFPY++I + E I + ++QL A++ K
Sbjct: 66 LDKVPEIRVFGSTDQGQRCCVHVHGVFPYVFIQYSGELDPEIVNSYIRQLGRTLNAAMAK 125
Query: 137 ALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
+ K Q+V I + K P YG+H ++ FLKI +P HM++L +L +G +
Sbjct: 126 SFKREQDRKVQEQYVGFICLVKGVPFYGFHIGQQYFLKIYCLQPRHMTRLSAILRSGKIM 185
Query: 197 -----------NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD 235
++ F+ +E+HIP++LQF +D+NLYG I+ KFR +
Sbjct: 186 SKPADKASGAKSQGFEVFEAHIPFLLQFMLDHNLYGCDWIDLERCKFRGE 235
>gi|296423830|ref|XP_002841455.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637695|emb|CAZ85646.1| unnamed protein product [Tuber melanosporum]
Length = 1622
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 37/201 (18%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
K+P++RVFG G+K C +HG FPYLY+ + + L D+A+ ++ G
Sbjct: 35 KIPIVRVFGATETGQKVCAHIHGAFPYLYVEYPG--------KSLMPEDDRAMGLSAGRS 86
Query: 146 DSVQH-----VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
Q V HIS+ K P YG+H + + KI L+ P+ +L +L +G V + F
Sbjct: 87 IRSQEKPPRFVAHISLVKGVPFYGFHVGWKFYCKIYLFNPHMRGRLARILQSGGVLSRVF 146
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------------------------S 236
QP+E+HI YI QF ID+NL G IE + V FR +
Sbjct: 147 QPHEAHIQYIPQFMIDFNLNGCGFIECDKVLFRGEIPDADEIGEQHIWHNKSIPEVSILP 206
Query: 237 ETSLPKLSHCQLEADVKAESI 257
E+ + S+C LE D+ I
Sbjct: 207 ESQFQRQSYCTLEVDIHVRDI 227
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSEL-RNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + ID + + P + DP + + K+P++RVFG G+K C +HG FPY
Sbjct: 3 FRIRLNNIDSYQAYPTS-LDPTFPHIPDDERPPKIPIVRVFGATETGQKVCAHIHGAFPY 61
Query: 61 LYIPF 65
LY+ +
Sbjct: 62 LYVEY 66
>gi|66824397|ref|XP_645553.1| DNA polymerase zeta catalytic subunit [Dictyostelium discoideum
AX4]
gi|60473728|gb|EAL71668.1| DNA polymerase zeta catalytic subunit [Dictyostelium discoideum
AX4]
Length = 2701
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 29/188 (15%)
Query: 75 VHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI 134
+ S N I++VP++R+FG+ G+K C+ +H +FPY +I + ++ + +
Sbjct: 43 LSSSNNNKTIEEVPIVRIFGSTPAGQKCCLHLHQLFPYFFIEYTENSLSTEYVSTYIRKL 102
Query: 135 DKALNIALGYKDSV-----------------------------QHVFHISICKKFPMYGY 165
LN+AL + ++ Q++F+ + + P YGY
Sbjct: 103 VSTLNLALNHSNNNNNNNNNNNNNNNNSNNNINSNNNNNVFLKQYIFNAKLVRGRPFYGY 162
Query: 166 HADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI 225
H+ ++ F+KI LY P ++++ +LL +G + + F+ +ESHIP+ILQ +DYNL GMSNI
Sbjct: 163 HSTDKIFIKIYLYNPDDINRVANLLRSGMIMSRCFRVFESHIPFILQVFLDYNLSGMSNI 222
Query: 226 EFNMVKFR 233
EF FR
Sbjct: 223 EFTNAYFR 230
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 2 FSMNIVTIDFFMSKPIAHFD----PVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGV 57
FS+ IV ID++ ++P+ D P+ S N I++VP++R+FG+ G+K C+ +H +
Sbjct: 18 FSVRIVDIDYYQTRPVQGLDVMVSPLSSSNNNKTIEEVPIVRIFGSTPAGQKCCLHLHQL 77
Query: 58 FPYLYIPFHHEPITETIVHSELRNLV 83
FPY +I + ++ V + +R LV
Sbjct: 78 FPYFFIEYTENSLSTEYVSTYIRKLV 103
>gi|403217770|emb|CCK72263.1| hypothetical protein KNAG_0J01820 [Kazachstania naganishii CBS
8797]
Length = 1514
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 38/242 (15%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQK---VPVIRVFGNNIEGKKTCVFVHGV 57
M + + D +M KP D H +L + K VPVIR++GN G +T VHG+
Sbjct: 20 MIHIQMNNYDSYMCKPSTLLDTNHGT--SLPLNKYEYVPVIRIYGNIPSGHQTLCHVHGI 77
Query: 58 FPYLYIPFHHE--PITETIVHSELRNLVIQKVPVIRV-FGNNVEGK---KTCVFVHGVFP 111
FPY++IP+ E T TIV+ + L + IRV F N + K K + G P
Sbjct: 78 FPYIFIPYDGEFKNETSTIVNQKCTQLHLTLENRIRVLFFQNKKSKNQDKGPGYNSGEKP 137
Query: 112 YLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT 171
E+ + QL +++++ ++S+ K P YGYH +
Sbjct: 138 ------------ESPINQLG---------------NLKYIANVSVVKGMPFYGYHTNWSL 170
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
F KI L P H+ ++ DL+ NGA N + +E+HIPYILQF D+NL+G I+
Sbjct: 171 FYKICLLNPSHVHRVTDLIRNGAALNSDIEVFEAHIPYILQFLTDFNLFGCYWIKLQKCY 230
Query: 232 FR 233
FR
Sbjct: 231 FR 232
>gi|443899578|dbj|GAC76909.1| DNA polymerase zeta, catalytic subunit [Pseudozyma antarctica T-34]
Length = 1665
Score = 112 bits (280), Expect = 3e-22, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 39/229 (17%)
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
P+ T +++KVPV+R+FG G++ C+ VH VFPY YI + + +L+
Sbjct: 48 PLDRTQCAFNAEGQLLRKVPVLRIFGATPAGQRVCIHVHNVFPYCYIQYKGSLDPDDVLR 107
Query: 129 -------QLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
+L A++ +L ++ Q + I +CK YGYH FLKI +P
Sbjct: 108 YIHRLGRELNAAMAASLRRNAADPEANQFIAAIHLCKGINFYGYHVGYSYFLKISFVDPS 167
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------- 233
H ++ +L +G V FQP+E HI Y LQF +DYN++G ++ + V+FR
Sbjct: 168 HSYRIATILESGGVMKTIFQPFEIHIRYQLQFMLDYNIFGCDYLDLDDVRFRLPVPEGSM 227
Query: 234 --------SDSET------SLP----------KLSHCQLEADVKAESIV 258
SD+ + ++P + ++C++EAD+ A I+
Sbjct: 228 VASDEPSPSDARSKVWNRNTIPYAQLQSEDVHRATYCEIEADISAPWII 276
>gi|218200227|gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indica Group]
gi|222637649|gb|EEE67781.1| hypothetical protein OsJ_25510 [Oryza sativa Japonica Group]
Length = 1797
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 64/233 (27%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+ IV++D++M+ P+ FD +S +++VPVIR++G+ G+KTC+ +H V P+
Sbjct: 17 VLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVLPF 76
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+ P E ++H NVE K F+ G
Sbjct: 77 LYV-----PCKEDLLH-------------------NVE--KGNSFISG------------ 98
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEP 180
L + ++KAL I K H + KK LY P
Sbjct: 99 ---------LLSDLEKALQIRSSSKKKHVHGCTLVRAKK-----------------LYYP 132
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ +S+ LL+GAV N FQPYESHIPY+L F IDYNLYGM + KFR
Sbjct: 133 HEVSRAAAHLLDGAVLNRVFQPYESHIPYLLHFLIDYNLYGMGYVHVTDFKFR 185
>gi|325186586|emb|CCA21132.1| DNA polymerase zeta catalytic subunit putative [Albugo laibachii
Nc14]
Length = 1726
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 8/157 (5%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE------TMLQQLAASIDKALN 139
+VPVIRVFG+ G+K V +HGV PY Y+ ++PI E +L +LA I+K +
Sbjct: 48 RVPVIRVFGSTPAGQKALVHLHGVLPYFYLRCENDPIFEQLSELQKLLPELARDIEKCFH 107
Query: 140 IALG--YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
++S + F I K P YGYH R F++I Y P H + L ++L +G +
Sbjct: 108 KKADNPSENSFKIKFSNVIAKGIPFYGYHNQPRLFVQIFYYNPRHSNHLVEMLRSGEITK 167
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
FQ +ESH+PY+LQ DY++ GM+ + + VKFR+
Sbjct: 168 RVFQTFESHVPYMLQIFADYHIEGMNPLFLSNVKFRA 204
>gi|326471536|gb|EGD95545.1| polymerase zeta subunit [Trichophyton tonsurans CBS 112818]
Length = 1694
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 129/274 (47%), Gaps = 64/274 (23%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH--EP-------------- 121
+LR+ I KVPVIRVFG G+K C +HG PYLY+ + +P
Sbjct: 33 QLRSGSI-KVPVIRVFGATETGQKVCAHIHGALPYLYLEYKGPLDPAEGQEYILSYRYKS 91
Query: 122 ----ITETMLQQLAASIDKALNIALGYKD-----SVQHVFHISICKKFPMYGYHADERTF 172
I ++ L ASID AL AL Y+ S V +IS+ K P YGY+ R +
Sbjct: 92 AKHRIVNAAIRSLHASIDHAL--ALSYRRNPFDHSTAFVAYISLVKGIPFYGYYVGYRYY 149
Query: 173 LKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF 232
K+ L P HM++L DLLL GAV QPYESH+ +I Q+ DY+L+G + I + VKF
Sbjct: 150 FKVYLLNPLHMTRLADLLLQGAVMKRALQPYESHLQFIPQWMCDYSLHGCTFINCSKVKF 209
Query: 233 R--------------------------SDSETSLPKLSHCQLEADVKAESIVVDMAANDS 266
R SD T P+ SHC +E D+ + I+
Sbjct: 210 RPPVPSYISLENPDHLWHDESIPQGDISDP-TEFPRQSHCAIEVDIHVQDILNRHEIRQR 268
Query: 267 D------VATSGGITRYLSDVLLNSMRAILLGQE 294
D V ++ G ++++ L+ S+R + +E
Sbjct: 269 DIHHDFVVESNEG---FITEKLVPSLRVLWKDEE 299
>gi|241751685|ref|XP_002400980.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
gi|215508270|gb|EEC17724.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
Length = 217
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 94/175 (53%), Gaps = 12/175 (6%)
Query: 77 SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP--ITETMLQQLAASI 134
S L + KVPVIR+FG G+K C+ VHGVFPYL +PF + + LA+ +
Sbjct: 25 SRLGGWEVWKVPVIRIFGVTSGGQKACLHVHGVFPYLCVPFDEDSGERADKFAPMLASEL 84
Query: 135 DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA 194
D LN A G S P+YG+H ERTFLKI LY PY + K+ DLLL+G
Sbjct: 85 DLLLNTAAGRAASSSAT---------PLYGFHNKERTFLKIYLYNPYSVKKVADLLLSGM 135
Query: 195 VFNERFQPYESHIPYILQFC-IDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
V + QP+E+HIP+ LQ ++ L + E R D+ T + LSH +L
Sbjct: 136 VLKKVMQPHEAHIPFALQAGEMNPGLSALWRDEEERRARRGDASTLVAPLSHDRL 190
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ IVT+D +++ P+ DP S L + KVPVIR+FG G+K C+ VHGVFPY
Sbjct: 1 MFSLRIVTVDHYLAAPVPRLDPGFSRLGGWEVWKVPVIRIFGVTSGGQKACLHVHGVFPY 60
Query: 61 LYIPFHHE 68
L +PF +
Sbjct: 61 LCVPFDED 68
>gi|402585433|gb|EJW79373.1| hypothetical protein WUBG_09718 [Wuchereria bancrofti]
Length = 392
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALG 143
KVP+IR+FG G+K CV VHGVFPY+ I P ++L+ SI N L
Sbjct: 31 KVPIIRMFGILQTGQKCCVHVHGVFPYIVIRTTVQFTPEFASLLRNKIGSIVSDYNPRLK 90
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPY 203
+ + ++ I +YGYH + F++IL Y P + + D L A N FQ Y
Sbjct: 91 FNVNFA-IYEIKSITARSLYGYHKNSENFVQILCYNPLQLRIIADALQKEARKNSIFQVY 149
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
E+HIPYILQF ID++++GM + F+ VKFR + +L + D+K E+IV
Sbjct: 150 EAHIPYILQFFIDHSIFGMDMVNFSSVKFRVSPQRNLNDFYY----QDLKVENIV 200
>gi|356504040|ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
Length = 2793
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 101/233 (43%), Gaps = 83/233 (35%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IVTID++M+ PI D
Sbjct: 10 IFSIRIVTIDYYMAPPIPDAD--------------------------------------I 31
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
Y FH + E VPVIRV+G G+KTC+ +H
Sbjct: 32 CYSSFHGGKVNE--------------VPVIRVYGPTPAGQKTCLHIH------------- 64
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEP 180
L+ A S S QHV S+ + YGYH+ E F+KI LY P
Sbjct: 65 -----RLKGNAGS-------------SRQHVHGCSLVRARKFYGYHSLEELFVKIYLYYP 106
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+S+ +LLL GAV ++ QPYESHIP+ILQF +DYNLYGM ++ + +KFR
Sbjct: 107 QDVSRAANLLLAGAVLDKSLQPYESHIPFILQFLVDYNLYGMGHLHLSKMKFR 159
>gi|242046854|ref|XP_002461173.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
gi|241924550|gb|EER97694.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
Length = 1714
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 50/233 (21%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+ IV++D++M+ P+ F S +++VPV+R++G+ G+KTC+ +H V PY
Sbjct: 18 VLSVRIVSLDYYMAPPLPGFGFSRSPFHGDGVEEVPVVRIYGSTPAGQKTCLHIHRVLPY 77
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YIP E + +N+E K ++ G+ L
Sbjct: 78 FYIPCPEELL------------------------DNLE--KGDSYITGLLSAL------- 104
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEP 180
E LQ S K ++ +L K S C+K H F + Y P
Sbjct: 105 ---EKALQARGPSKRKHVHGSLNGK---------SYCEKV-----HYAIDFFDLVSRYYP 147
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ +S+ L+L+GAV N FQPYESHIPY+L F +DYNLYGM +I KFR
Sbjct: 148 HEVSRAASLVLSGAVSNRAFQPYESHIPYLLHFLVDYNLYGMGHIHVKDFKFR 200
>gi|50549261|ref|XP_502101.1| YALI0C21648p [Yarrowia lipolytica]
gi|49647968|emb|CAG82421.1| YALI0C21648p [Yarrowia lipolytica CLIB122]
Length = 1338
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 64 PFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
P + ET V E + +VPV+R+FG +G +C VH VF Y YIP+ ++
Sbjct: 20 PLDWSKVPET-VSCECDYKDLHRVPVLRIFGGTSDGLSSCAHVHNVFQYFYIPYTGPSLS 78
Query: 124 ETMLQQLAASIDKALNIALGYK--------DSVQHVFHISICKKFPMYGYHADERTFLKI 175
+ A + + +N+ L K + + +I +CK P YGYH R +LKI
Sbjct: 79 PADSEPFIADMYRRINLQLRSKRTRGEKLPEECSFLANIVLCKATPFYGYHEGWRYYLKI 138
Query: 176 LLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD 235
++ +P H+ L D+ NG + + +ESH+ YILQF DYNL+G +E + R +
Sbjct: 139 VVVDPSHVGMLVDMFRNGVFGWDHSRVFESHLSYILQFFCDYNLHGCGWMEASRYMMRRE 198
Query: 236 SETSLPKLSHCQLEADVKAESIV 258
+S + E D++AE I+
Sbjct: 199 G-----MISKSEFEVDLQAEYIL 216
>gi|159127940|gb|EDP53055.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus A1163]
Length = 1656
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 84/168 (50%), Gaps = 28/168 (16%)
Query: 113 LYIPFHHEPITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADE 169
L + F H+ + +++L SID AL + Y V HI++ K P YGYH
Sbjct: 27 LQVFFSHQAAVRSAIRRLHLSIDHALALNYRRNAYDKKTAFVAHITLVKGVPFYGYHVGY 86
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNM 229
R F KI L +P + ++L DLLL GAV QPYESH+ Y+ Q+ DYNLYG + I+ +
Sbjct: 87 RFFFKIYLLDPVYTTRLADLLLQGAVLKRPMQPYESHLQYVPQWMCDYNLYGCAYIKCSK 146
Query: 230 VKFRS-------------------------DSETSLPKLSHCQLEADV 252
VKFRS T LPK SHC LEADV
Sbjct: 147 VKFRSPIPEYYELSNLSHRWHDRSIQPDCVSDATVLPKQSHCPLEADV 194
>gi|320592419|gb|EFX04849.1| DNA polymerase zeta catalytic [Grosmannia clavigera kw1407]
Length = 2153
Score = 108 bits (270), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 12/140 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--HHEPI-TETMLQQLAASIDKALNIAL 142
+VP+IRVFG GK C +HG FPYL++PF + +P + ++ QL +D+AL
Sbjct: 62 RVPIIRVFGATPAGKTACAHIHGAFPYLFVPFDGYFQPADADKVMDQLRRGLDQALGRIT 121
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN-ERFQ 201
V +++ + P YG+H R F KI L +P MS+ ++L G + Q
Sbjct: 122 --------VLAVTLARGVPFYGFHVGLRLFCKIYLLDPAAMSRAAEMLRLGRIGGLPALQ 173
Query: 202 PYESHIPYILQFCIDYNLYG 221
P+E+H+P++LQF DYNLYG
Sbjct: 174 PHEAHVPFVLQFMTDYNLYG 193
>gi|170575674|ref|XP_001893336.1| DNA polymerase family B containing protein [Brugia malayi]
gi|158600728|gb|EDP37834.1| DNA polymerase family B containing protein [Brugia malayi]
Length = 1385
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALG 143
KVP+IR+FG G+K CV VHGVFPY+ I P ++L+ +SI N L
Sbjct: 31 KVPIIRMFGILQTGQKCCVHVHGVFPYIVIQTTVQFTPEFASLLRNRISSIVSDYNPRLK 90
Query: 144 YKDSVQHVFH-ISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQP 202
+ +V H I +YGYH + F++IL Y P + + D L A N FQ
Sbjct: 91 F--NVNFAIHEIKSITARSLYGYHKNNENFVQILCYNPLQLRIIADALQKEARKNSIFQV 148
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
YE+HIPY+LQF ID++++GM + F+ VKFR + + + D+K E+IV
Sbjct: 149 YEAHIPYVLQFFIDHSIFGMDMVNFSSVKFRVSPQRNFNDFYY----QDLKVENIV 200
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
S+ VT D+++ KP F+ +H LR V KVP+IR+FG G+K CV VHGVFPY+
Sbjct: 4 LSVRNVTCDYYLEKPNG-FNKIH--LRTNV--KVPIIRMFGILQTGQKCCVHVHGVFPYI 58
Query: 62 YI 63
I
Sbjct: 59 VI 60
>gi|302789498|ref|XP_002976517.1| hypothetical protein SELMODRAFT_443228 [Selaginella moellendorffii]
gi|300155555|gb|EFJ22186.1| hypothetical protein SELMODRAFT_443228 [Selaginella moellendorffii]
Length = 2679
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 21/156 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETM--LQQLAASIDKAL 138
+ +VPV+R++G+ + G+KTC+ +H PY Y+P+ + + E M +++LA ++++A+
Sbjct: 44 VMEVPVVRIYGSTLAGQKTCLHLHKALPYFYVPYDDDLPQSLEEAMAFVRRLALALERAM 103
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
+A QHV + + Y P S++ LL+G + N
Sbjct: 104 KMASAIGAKRQHVHSCDLVRAKKYY----------------PQEASQMSAFLLSGGILNR 147
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
+FQPYE+HIPY+LQ +DYNL GM +E + ++FRS
Sbjct: 148 KFQPYEAHIPYLLQLKMDYNLAGMGLLEVSSLRFRS 183
>gi|71000489|ref|XP_754928.1| DNA polymerase zeta catalytic subunit [Aspergillus fumigatus Af293]
gi|66852565|gb|EAL92890.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus Af293]
Length = 1656
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 84/168 (50%), Gaps = 28/168 (16%)
Query: 113 LYIPFHHEPITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADE 169
L + F H+ + +++L SID AL + Y V HI++ K P YGYH
Sbjct: 27 LQVFFSHQAAVRSAIRRLHLSIDHALALNYRRNAYDKKTAFVAHITLVKGVPFYGYHVGY 86
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNM 229
R F KI L +P + ++L DLLL GAV QPYESH+ Y+ Q+ DYNLYG + ++ +
Sbjct: 87 RFFFKIYLLDPVYTTRLADLLLQGAVLKRPMQPYESHLQYVPQWMCDYNLYGCAYMKCSK 146
Query: 230 VKFRS-------------------------DSETSLPKLSHCQLEADV 252
VKFRS T LPK SHC LEADV
Sbjct: 147 VKFRSPIPEYYELSNLSHRWHDRSIQPDCVSDATVLPKQSHCPLEADV 194
>gi|151942632|gb|EDN60978.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae YJM789]
Length = 1504
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I N FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVNRCYFRS 220
>gi|402221982|gb|EJU02050.1| hypothetical protein DACRYDRAFT_107768 [Dacryopinax sp. DJM-731
SS1]
Length = 1592
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE--PIT-ETMLQQLAASIDKALN 139
+ KVPV+ VFG+ G+K CV +H VFPYLYI + E P + + +L ++ AL
Sbjct: 33 TLNKVPVLNVFGHTSAGQKACVHIHNVFPYLYIEYKGELDPGSVNKFINRLGRKLNHALT 92
Query: 140 IALGY----KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
+ L +++ QH+ I K YG+H FLKI+ +P + K++ LL +GA+
Sbjct: 93 LVLRRNPYVQNTPQHIVAILPVKGVHFYGFHHRRSIFLKIMFSDPRLIRKVQLLLESGAI 152
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ +Q YESH+ Y LQF D+NLYG + +E +FR
Sbjct: 153 CEKAWQTYESHVDYKLQFMCDFNLYGCNWLEVADCRFR 190
>gi|401623294|gb|EJS41398.1| rev3p [Saccharomyces arboricola H-6]
Length = 1502
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + DF+MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 25 FRFQLNNHDFYMSKPTP-LDPSHGESLPLNQFDRVPTIRVFGALSTGHQVLCHVHGILPY 83
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + I++T R + K+ +E K F G
Sbjct: 84 IFIKYDGY-ISDTSTLRHQRCAQVHKI---------LERKLKACFTKG------------ 121
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEP 180
+ ++ DK N+A +V ++S+ K P YGYH F KI L P
Sbjct: 122 -----KKDKDNSNSDKLGNLA--------YVANVSVVKGIPFYGYHVGWSLFYKISLLNP 168
Query: 181 YHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
++++ +L+ NG +F+ +F+ YESHI Y+LQ+ D+NL+G S I + FRS
Sbjct: 169 SSVNRISELIRNGTIFDNKFETYESHISYLLQWTADFNLFGCSWINVDECYFRS 222
>gi|226294625|gb|EEH50045.1| DNA polymerase zeta catalytic subunit [Paracoccidioides
brasiliensis Pb18]
Length = 1628
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 26/163 (15%)
Query: 122 ITETMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLY 178
+ T ++ L S D AL ++ Y+ + +V HI++ K P YGYH R FLKI L+
Sbjct: 18 VVNTAIRTLHMSADHALAVSYRRNAYERKISYVAHITLVKGVPFYGYHVGYRFFLKIYLF 77
Query: 179 EPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD--- 235
P HM++L DLL GAV QPYESH+ Y+ Q+ DYNLYG + + + V FR+
Sbjct: 78 NPMHMNRLADLLRQGAVMKRVLQPYESHLQYLAQWMCDYNLYGCAYLRSSKVMFRAPIPI 137
Query: 236 -SE-------------------TSLPKLSHCQLEADVKAESIV 258
SE ++LP+ SHC LE D+ + IV
Sbjct: 138 YSENLTHRWHDRSIPPGSVSDISTLPRQSHCDLEVDIHVQDIV 180
>gi|343428638|emb|CBQ72168.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Sporisorium reilianum SRZ2]
Length = 1677
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
P+ T ++KVP++R+FG G++ C+ VH V+PY YI + + +L+
Sbjct: 45 PLDRTQCAFNAEGQSLRKVPILRIFGATPAGQRVCLHVHNVYPYCYIQYKGSLDPDDVLR 104
Query: 129 ---QLAASIDKALNIALGYK----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
+L ++ A+ +L +S Q + I +CK YGYH FLKI +P
Sbjct: 105 YIHRLGRELNAAMAASLRRNPDDPESNQFIAAIHLCKGVNFYGYHVGYSYFLKISFVDPS 164
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------- 233
H ++ +L +G V FQP+E HI Y LQF +DYN++G ++ V+FR
Sbjct: 165 HNYRIAAILESGGVMKTVFQPFEIHIRYQLQFMLDYNIFGCDYLDLGDVRFRLPIPEGSS 224
Query: 234 --SD------------SETSLP----------KLSHCQLEADVKAESIV 258
SD + S+P + +HC+LEAD A I+
Sbjct: 225 VASDDPSPLDFRSKIWNRNSIPYAHVQAEDVHRGTHCELEADASAPWII 273
>gi|256274231|gb|EEU09139.1| Rev3p [Saccharomyces cerevisiae JAY291]
Length = 1504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I + FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINLDRCYFRS 220
>gi|190407794|gb|EDV11059.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae RM11-1a]
Length = 1504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I + FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINLDRCYFRS 220
>gi|71006944|ref|XP_758078.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
gi|46097152|gb|EAK82385.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
Length = 1678
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 39/214 (18%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ-------QLAASIDK 136
++KVPV+R+FG G++ C+++H V+PY YI + + +L+ L A++
Sbjct: 66 LRKVPVLRLFGATPAGQRVCLYIHNVYPYCYIQYKGSLDPDNVLRYIHRLGRGLNAAMAA 125
Query: 137 ALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF 196
+L L D+ Q + I +CK YGYH +LKI +P H ++ +L +G V
Sbjct: 126 SLRRNLHDTDANQFIAAIHLCKGVNFYGYHVGYSYYLKISFVDPAHNYRIAAILESGGVM 185
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR----------------SDSET-- 238
FQP+E HI Y LQF +DYN++G ++ + ++FR DS +
Sbjct: 186 KTVFQPFEIHIRYQLQFMLDYNIFGCDYVDLDDIRFRLPIPEGNLVANDDLSPLDSRSKI 245
Query: 239 ----SLP----------KLSHCQLEADVKAESIV 258
S+P + S+C+LEAD A I+
Sbjct: 246 WNRNSIPYAHVQAPDVHRGSYCELEADASAPWII 279
>gi|349581651|dbj|GAA26808.1| K7_Rev3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1504
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I + FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRCYFRS 220
>gi|6325090|ref|NP_015158.1| Rev3p [Saccharomyces cerevisiae S288c]
gi|118901|sp|P14284.1|DPOZ_YEAST RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|172387|gb|AAA34968.1| DNA polymerase (pot.); putative [Saccharomyces cerevisiae]
gi|1370353|emb|CAA97873.1| REV3 [Saccharomyces cerevisiae]
gi|1403542|emb|CAA65554.1| P2535 protein [Saccharomyces cerevisiae]
gi|285815375|tpg|DAA11267.1| TPA: Rev3p [Saccharomyces cerevisiae S288c]
gi|392295841|gb|EIW06944.1| Rev3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1504
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I + FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRCYFRS 220
>gi|365762744|gb|EHN04277.1| Rev3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1504
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I + FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRCYFRS 220
>gi|259149989|emb|CAY86792.1| Rev3p [Saccharomyces cerevisiae EC1118]
Length = 1504
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNL-VIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
F + + D++MSKP DP H E L +VP IRVFG G + VHG+ PY
Sbjct: 23 FRIQLNNQDYYMSKP-TFLDPSHGESLPLNQFSQVPNIRVFGALPTGHQVLCHVHGILPY 81
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
++I + + IT+T S LR+ + C VH
Sbjct: 82 MFIKYDGQ-ITDT---STLRH-------------------QRCAQVH------------- 105
Query: 121 PITETMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKIL 176
+T+ ++ AS D ++A ++ V +S+ K P YGYH F KI
Sbjct: 106 ---KTLEVKIRASFKRKKDDKHDLAGDKLGNLNFVADVSVVKGIPFYGYHVGWNLFYKIS 162
Query: 177 LYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L P +S++ +L+ +G +F ++F+ YESHIPY+LQ+ D+NL+G S I + FRS
Sbjct: 163 LLNPSCLSRISELIRDGKIFGKKFEIYESHIPYLLQWTADFNLFGCSWINVDRCYFRS 220
>gi|169595886|ref|XP_001791367.1| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
gi|160701180|gb|EAT92185.2| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
Length = 1584
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 58/198 (29%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VP+IR FG G+K C +HG PYLY+ ++ S++K + +
Sbjct: 39 QVPIIRAFGATETGQKVCAHIHGALPYLYLEYN-------------GSLEKEVGV----- 80
Query: 146 DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
P +GY + FLK+ + P HM++ DLL +GA+ + FQPYES
Sbjct: 81 ---------------PFFGYSVGYKIFLKVYMLNPVHMTRFADLLHSGAIMDRVFQPYES 125
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRS---DS----------------------ETSL 240
H+ Y+LQ+ DYNLYG I+ V FR DS E
Sbjct: 126 HLQYLLQWMCDYNLYGCDYIDCAKVLFRGPVPDSDEVDTSVHKWHDASIPDEFMAEEGQY 185
Query: 241 PKLSHCQLEADVKAESIV 258
P+ SHC LE D+ + I+
Sbjct: 186 PRQSHCTLEVDICVQDIL 203
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPV----HSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGV 57
F + ID + + P DPV + +VP+IR FG G+K C +HG
Sbjct: 4 FRFRLNCIDNYQATP-TDLDPVLRRNAGPTKRQDAPQVPIIRAFGATETGQKVCAHIHGA 62
Query: 58 FPYLYIPFH 66
PYLY+ ++
Sbjct: 63 LPYLYLEYN 71
>gi|367000956|ref|XP_003685213.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
gi|357523511|emb|CCE62779.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
Length = 1503
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 19/168 (11%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE--PITETMLQQLA---ASIDKALN 139
+ VPVIR+FG+ G + VHG++PY+Y+ + I+ M Q+ + + ++
Sbjct: 52 ENVPVIRIFGSLPTGHQVLCHVHGIYPYIYVGYDGSIHDISTVMNQKCSNIHSKLENLSR 111
Query: 140 IALGYKDS--------------VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSK 185
+ LG + + +++V ++SI K P YGYH F KI +P+ +++
Sbjct: 112 VQLGNQKNDKASSHSKNDNNHRLKYVANVSIVKGIPFYGYHVGWSLFYKISFLKPHFVNR 171
Query: 186 LEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ DL+ NG +F Q YE+HIPY LQFC D+NL+G S +E + FR
Sbjct: 172 ISDLIRNGDLFKNGAQIYEAHIPYYLQFCADFNLFGCSWLELDTCYFR 219
>gi|391334923|ref|XP_003741848.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1420
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALG 143
+++VP++RVFG GKK C+ +H ++PYL + F P E S++KALN
Sbjct: 43 LKQVPILRVFGIESSGKKCCIHIHRIYPYLCVKFESSP-DERRKAAFVESLEKALNAH-- 99
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPY 203
K + + + K YGY+A+E FLKI +P + + ++L + V + +
Sbjct: 100 SKVARHRIVEATFFKGTNFYGYYANEEVFLKISFSDPRTLKRASEVLNSSQVLGSAIRVF 159
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAA 263
E+H P+ LQF ID+ L GM+++ R+ S+ PK S CQ+E D E ++
Sbjct: 160 EAHTPFPLQFMIDHQLQGMNSLRIGKFIPRT-SDQGPPKQSCCQMEVDCFVEDVLNQYEE 218
Query: 264 ND 265
D
Sbjct: 219 QD 220
>gi|388853211|emb|CCF53077.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Ustilago
hordei]
Length = 1689
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
P+ T ++KVP++R+FG G++ C+ +H V+PY Y+ + L+
Sbjct: 46 PLDRTQCAFNAEGQTLRKVPILRIFGATPAGQRVCLHIHNVYPYCYVQYKGSLDPGDALR 105
Query: 129 ---QLAASIDKALNIALGYK----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
+L ++ A+ ++L ++ Q + I +CK YGYH FLKI +P
Sbjct: 106 YIHRLGRELNAAMAVSLRRNPDDPEANQFIAAIHLCKGVNFYGYHVGYSYFLKISFVDPS 165
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------- 233
H ++ +L +G V FQP+E HI Y LQF +DYN++G ++ + V FR
Sbjct: 166 HNYRIATILESGGVMKTIFQPFEIHIRYQLQFMLDYNIFGCDYVDLDDVSFRLPIPEGST 225
Query: 234 -SDSETSLP-----------------------KLSHCQLEADVKAESIV 258
+ E S P + +HC+LEAD A I+
Sbjct: 226 VASDEPSPPDSRRKIWDRNSIPYTHVQPEEVHRGTHCELEADASAPWII 274
>gi|406608056|emb|CCH40490.1| DNA polymerase zeta subunit [Wickerhamomyces ciferrii]
Length = 1409
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 15/174 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP---ITETMLQQLAASIDKAL----N 139
VPV+RVFG+ G +HG +PY+YIP+ ++ + + + +A+S+++ N
Sbjct: 56 VPVVRVFGSIPTGHNIIAHIHGAYPYIYIPYDNQDCFRLQQVLEAAIASSLNRKKSDNEN 115
Query: 140 IALGYKDS--VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
+K+S +++ HIS+CK P YGY+ + F KI L P + ++L ++L +G
Sbjct: 116 TNDNHKESKVFKYIAHISLCKGVPFYGYNVGYKAFYKIYLLNPSYSNRLAEMLRDGKATG 175
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
+++ YE HIPY+LQF D+NL+G + + + RS P LS L+ D
Sbjct: 176 KKYDCYEVHIPYVLQFLSDFNLFGCAWLRLKNLYLRS------PILSDDSLKTD 223
>gi|225558751|gb|EEH07035.1| polymerase zeta subunit [Ajellomyces capsulatus G186AR]
Length = 1628
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 26/160 (16%)
Query: 125 TMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
T ++ L SID AL I+ Y+ + +V HI+ K P YGYH R F KI L+ P
Sbjct: 12 TAIRTLQLSIDHALAISYRRNAYEKKMAYVAHITFVKGIPFYGYHVGYRFFFKIYLFNPM 71
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD------ 235
+M++L DLL GAV QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+
Sbjct: 72 NMTRLADLLRQGAVMKRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLE 131
Query: 236 -----------------SETSLPKLSHCQLEADVKAESIV 258
+ LP+ SHC LE D+ + I+
Sbjct: 132 NSTHIWHDRSIPESAVLDNSILPRQSHCDLEVDIHVQDII 171
>gi|325094502|gb|EGC47812.1| polymerase zeta subunit [Ajellomyces capsulatus H88]
Length = 1637
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 82/160 (51%), Gaps = 26/160 (16%)
Query: 125 TMLQQLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
T ++ L SID AL I+ Y+ + +V HI+ K P YGYH R F KI L+ P
Sbjct: 12 TAIRTLQLSIDHALAISYRRNAYEKKMAYVAHITFVKGIPFYGYHVGYRFFFKIYLFNPM 71
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL- 240
+M++L DLL GAV QPYESH+ Y+ Q+ DYNLYG + ++ + V FR+ T L
Sbjct: 72 NMTRLADLLRQGAVMKRVLQPYESHLQYLSQWMCDYNLYGCAYLKSSKVTFRAPIPTYLE 131
Query: 241 ----------------------PKLSHCQLEADVKAESIV 258
P+ SHC LE D+ + I+
Sbjct: 132 NSTHIWHDRSIPESAVLDNSISPRQSHCDLEVDIHVQDII 171
>gi|145477337|ref|XP_001424691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391757|emb|CAK57293.1| unnamed protein product [Paramecium tetraurelia]
Length = 1544
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 66 HHEPITETIVHSELRNL--VIQKVPVIRVFGNNVEGK-KTCVFVHGVFPYLYIPFHHEPI 122
+ E + ET+ +S L IQ PVIR+FG + K + CV VHG FPY YI
Sbjct: 14 NQETLFETLKYSNTDYLDRPIQFAPVIRLFGYEPKTKERMCVHVHGYFPYFYIKVDELRH 73
Query: 123 TETMLQQLAASIDK-----ALNIALGYKDSVQHVFHI----SICKKFPMYGYHADERTFL 173
T L + I+K A Y Q F I +C+K YG+H ++ FL
Sbjct: 74 LFTDLDFVKDFINKVHQVYASTFLAHYPKKSQEKFKIIYQYELCQKLDFYGFHMQKQLFL 133
Query: 174 KILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
K+ +Y+ +MS+L LL +GA+ N +FQ YESH+ Y + F D NL+GMS I+ +K+R
Sbjct: 134 KLFMYDKQYMSQLVMLLASGAIMNYKFQSYESHLTYFMHFYSDANLFGMSQIKILKLKYR 193
Query: 234 SDSETSLPKL 243
+ L L
Sbjct: 194 KRFDKDLESL 203
>gi|389751639|gb|EIM92712.1| hypothetical protein STEHIDRAFT_144019 [Stereum hirsutum FP-91666
SS1]
Length = 1703
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Query: 70 ITETIVH-SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
I T+V+ SEL N ++ K PVIR+FG + G+K C+ VH V+PY + + + +++ +
Sbjct: 16 IDHTMVNPSELDNTLLPKAPVIRIFGTSSTGQKACLHVHQVYPYFMVEYPGKTDPDSVNR 75
Query: 129 QLAASIDKALNIALG--YK---DS--VQHVFHISICKKFPMYGYHADERTFLKILLYEPY 181
+ I ++LN+AL YK DS + V I + K YG+H+ FLKI + +P
Sbjct: 76 YIGTLI-RSLNLALAVSYKRNPDSPNCRFVRAIVLVKGVHFYGFHSSYSLFLKIHIVDPA 134
Query: 182 HMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP 241
+ ++ ++ +G+V + RF+ +E H+ +ILQF D+NLYG IE V R + +
Sbjct: 135 YFTRSIAIMQSGSVMDTRFRVFEGHLSFILQFLCDFNLYGCGWIELGKVWQRGGRDAIID 194
Query: 242 KLSHCQLEA 250
L Q++
Sbjct: 195 VLGGIQVKG 203
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 4 MNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+ I ID M P SEL N ++ K PVIR+FG + G+K C+ VH V+PY +
Sbjct: 11 VQITNIDHTMVNP--------SELDNTLLPKAPVIRIFGTSSTGQKACLHVHQVYPYFMV 62
Query: 64 PF 65
+
Sbjct: 63 EY 64
>gi|254583932|ref|XP_002497534.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
gi|238940427|emb|CAR28601.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
Length = 1482
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP----------------ITETMLQQL 130
VPVIR++G G + VHG+FPY++I + + + E+ Q+
Sbjct: 53 VPVIRIYGCLPSGHQAVCHVHGIFPYIFIGYDGKKQDSSTDMNHRCAKLHRLLESKCQEF 112
Query: 131 AASIDKA-LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDL 189
A +K LG ++ ++ ++S+ K P YG+H F KI L P ++K D
Sbjct: 113 AGKNEKVPSGQPLG---ALSYIANVSVVKAVPFYGFHVGWSLFYKISLLNPGLVNKFSDW 169
Query: 190 LLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ +G +F +R + YE+H+PY+LQF +D+NL+G S ++FN FR
Sbjct: 170 IRDGKMFGKRVESYETHLPYLLQFSVDFNLFGCSWMDFNQCYFR 213
>gi|403161840|ref|XP_003322150.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171949|gb|EFP77731.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1748
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 26/180 (14%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDK 136
R + KVPV+R+FG G++ VHG PY Y+ F + +T+ +++L A+++
Sbjct: 46 RGQQLYKVPVLRLFGATQAGQRVVAHVHGAMPYFYVQFDAGILPDTVHSYIRRLGAALNY 105
Query: 137 ALNIALGYKDSV--------QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
A +LG + Q+V +I++CK P YG+H R FLKI +P ++ +
Sbjct: 106 ATAASLGKINKANPADRGRHQYVAYIALCKGIPFYGFHVGYRYFLKIYCVQPKFKKRMAE 165
Query: 189 LLLNGAVFNER---------------FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
LL G V + F+ +E HIP+ LQF +D+NLYG +E + FR
Sbjct: 166 LLRTGKVMSPSAYSQGDPAKGTRPGGFKVFEEHIPFHLQFMLDHNLYGCGWVELSNCAFR 225
>gi|426201443|gb|EKV51366.1| hypothetical protein AGABI2DRAFT_182321 [Agaricus bisporus var.
bisporus H97]
Length = 1480
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 23/195 (11%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN--IALG 143
+VP++R+FG + G +TC+ VH V+PY YI + + + ++Q K+LN IAL
Sbjct: 26 RVPILRIFGQSSVGLRTCLHVHQVYPYCYIEYQGD-LDLRHVKQYVRKFKKSLNHAIALS 84
Query: 144 YK-----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
K Q+V + + K YG+H+ FLKI+L +P M+++ +L +G+V ++
Sbjct: 85 LKRDPNSTKSQYVCAVVLVKGVKFYGFHSQYSPFLKIILLDPRLMNRVATILQSGSVMSQ 144
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS--DSETSL-------------PKL 243
RF YESH+ + LQF D+ LYG ++ + R+ SET + P
Sbjct: 145 RFPVYESHLSFTLQFMCDFGLYGCGSVGISKAYRRAVLGSETDILPEQVTSFEPSPYPPQ 204
Query: 244 SHCQLEADVKAESIV 258
SH +E DV + I
Sbjct: 205 SHMPIELDVISPEIT 219
>gi|156846635|ref|XP_001646204.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156116878|gb|EDO18346.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 1503
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM-LQQLAASIDKAL----- 138
+ VPVIRV+G+ G VHGVFPY+YI + ++ L Q A + K
Sbjct: 51 ESVPVIRVYGSLPTGHTVLCHVHGVFPYIYIRYDGNVYDSSLELNQRCARLHKLFEDKLK 110
Query: 139 --------NIALGYK-------DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHM 183
N A G K + ++++ ++SI K P YG++ F KI L P +
Sbjct: 111 TSDTSSKRNKAKGSKTNRYGDGNRLKYIANVSIVKAIPFYGFNVGWSLFYKISLLNPKYS 170
Query: 184 SKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+K+ DL+ +G +F+ + +ESHIPY+LQF DYNL+G S I+ + FR
Sbjct: 171 NKVSDLIRDGVMFDNEVETFESHIPYLLQFSSDYNLFGCSWIKLDKCYFR 220
>gi|444319010|ref|XP_004180162.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
gi|387513204|emb|CCH60643.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
Length = 1352
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 39/226 (17%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE-PITETMLQQLAASIDKALNIAL-- 142
++P+IRVFG + G + +HGVFPY ++P++ E + ++ Q A + K L
Sbjct: 46 QIPIIRVFGKLLSGHQVLCHIHGVFPYFFVPYNGEISDSSVVMNQKCAQLHKVLERRSLN 105
Query: 143 GYKDS--VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
G DS +++V ++SI K YGYH D F KI M+++ +L G +F +
Sbjct: 106 GKNDSNNLKNVANVSIVKAIRFYGYHKDWELFYKISFLNVSVMTQVCELFREGKIFKKSV 165
Query: 201 QPYESHIPYILQFCIDYNLYG---------------------MSNIEFN------MVKFR 233
+ESHIPY+LQF DYNL+G ++N+ ++ + KF
Sbjct: 166 DTFESHIPYLLQFSCDYNLFGCHWMSLEKCYFRDPVLNDILDINNLMWDDKIGNFLNKFC 225
Query: 234 SD----SETSLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGIT 275
S+ S T P++ + LE DV A+ I ++ ++ GGI+
Sbjct: 226 SEDMVLSRTEFPRMGNGLLEIDVVAQHI---RNRDELELVKDGGIS 268
>gi|452823373|gb|EME30384.1| DNA polymerase zeta subunit [Galdieria sulphuraria]
Length = 1615
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI---PFHHEPITETM--LQQLAASIDKAL 138
I + PVIR+FG+ + G+K C+ +H V PY Y+ P H + E QL ++ +L
Sbjct: 34 IARQPVIRIFGSTLSGQKCCLHIHNVLPYFYVQLPPKHFRNLGEAQAFTTQLVEFLEHSL 93
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
+ ++ ++ + + I ++ P YG+HA F+KI + P ++ KL DL +
Sbjct: 94 SSSISSTNAQKIIAATEIVERIPFYGFHAHSCFFVKIYTFVPGNIRKLADLCFRFPARDL 153
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
QP+ESHI Y+ QF IDYNLYGM+ I + +FR
Sbjct: 154 ILQPHESHISYLSQFMIDYNLYGMNFIRLSNPRFR 188
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 32 IQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
I + PVIR+FG+ + G+K C+ +H V PY Y+
Sbjct: 34 IARQPVIRIFGSTLSGQKCCLHIHNVLPYFYV 65
>gi|298715260|emb|CBJ27909.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 3112
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 41/240 (17%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI-PFHHEPIT-----------ETMLQQLAAS 133
K+PV+R+FG+ G+++C+ +HG PY + P E +L QL +
Sbjct: 25 KLPVVRIFGSTPAGQRSCLHLHGALPYFMVRPMEEESSAICAQFEDPGSLNALLPQLEQA 84
Query: 134 IDKALNIALG-------------------YKDSVQHVF-HISICKKFPMYGYHADERTFL 173
++ A+ + G + + Q V + + + P YGYH +E+ F+
Sbjct: 85 LESAMASSSGGPGAPSLSPAGGAGRGGRPWGRNRQPVLARLEVVRGVPFYGYHGEEKLFV 144
Query: 174 KILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
K+ + P K+ +L G V + RFQP+ESH+P++LQ IDYN+ GMS + F
Sbjct: 145 KVYVNNPALTGKVASVLQAGHVLSTRFQPFESHVPFLLQVFIDYNISGMSYVHLRNALFL 204
Query: 234 SDSETSLPKLSHCQLEADVKAESIVVDMAANDSDVATSGGITRYLSDVLLNSMRAILLGQ 293
LP+LS + + + + ND+D + GI + S + S+ A +GQ
Sbjct: 205 Q----PLPELSSVTSSSQEPSPN---SIGLNDNDESPLTGI--FTSATVPESLVANPVGQ 255
Score = 42.4 bits (98), Expect = 0.35, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 17/69 (24%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+ +V +D+++S+ K+PV+R+FG+ G+++C+ +HG PY
Sbjct: 8 LISVRVVNVDWYLSEE----------------SKLPVVRIFGSTPAGQRSCLHLHGALPY 51
Query: 61 LYI-PFHHE 68
+ P E
Sbjct: 52 FMVRPMEEE 60
>gi|308497790|ref|XP_003111082.1| hypothetical protein CRE_04525 [Caenorhabditis remanei]
gi|308242962|gb|EFO86914.1| hypothetical protein CRE_04525 [Caenorhabditis remanei]
Length = 1337
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL--- 142
K+PV ++G G+K C+ VHGV PYL + + +T T++ + A I+K + +
Sbjct: 30 KIPVFHIYGVTDSGQKACLHVHGVLPYLVLRVGGK-LTPTVVAAMKAKINKGIEKEIETS 88
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
K + +V+ + +YGY +E F+++ P+++ K L V
Sbjct: 89 TGNTKKYNADYVYKMETFSSRSLYGYQDEEEYFVRVYFSSPWYLQKATHSLGKEVVDKPL 148
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
FQPYE+H+P+ LQF ID +++GM NI N VKFR SE
Sbjct: 149 FQPYEAHLPFHLQFFIDNSIFGMDNIHLNQVKFRICSE 186
>gi|392597385|gb|EIW86707.1| hypothetical protein CONPUDRAFT_95484 [Coniophora puteana
RWD-64-598 SS2]
Length = 1571
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDKALNIAL 142
+VPVIR++G + G K CV +H V+PY ++ ++ E++ + +L S++ A+ ++L
Sbjct: 32 QVPVIRIYGVSSVGHKACVHIHQVYPYFFVEYNGLMTPESVNEYIGKLIVSLNHAIALSL 91
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQP 202
Q V I + K YG+H+ FLKIL+ +P S+ +L+ +G V + RF+
Sbjct: 92 KRDLDSQFVRAILLVKGIHFYGFHSMHSPFLKILVLDPSLYSRAVNLMRSGVVMHTRFRI 151
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
YESH+ +ILQF D+ LYG I + FR + +
Sbjct: 152 YESHLNFILQFMCDFGLYGCGWIHLGQIFFRGEDD 186
>gi|390604346|gb|EIN13737.1| hypothetical protein PUNSTDRAFT_117429 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1767
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--HHEPI-TETMLQQLAASID 135
L N + +VPVIRVFGN G+KTCV +H V+PY ++ + EP + +L+ S++
Sbjct: 25 LDNSTLPRVPVIRVFGNGNVGQKTCVHIHQVYPYFFVEYLGRMEPEHVNRYIARLSRSLN 84
Query: 136 KALNIALGYKDSVQH---VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
A+ +++ Q V ++I K YG+H+ FLK+ + +P +++ +L +
Sbjct: 85 HAIAVSMKRNPQSQKSQFVRAVTIVKGVHFYGFHSSYSPFLKVHIADPAVVNRATTILRS 144
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL 240
G V F+ +ESH+ Y+LQF D+ LYG ++ V R + +L
Sbjct: 145 GTVMRTSFRIFESHLNYVLQFMSDFGLYGCGVLDLGEVWQRGQDDETL 192
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
S+ + ID++++ P L N + +VPVIRVFGN G+KTCV +H V+PY
Sbjct: 8 LSVRLNNIDYYLAPP--------GPLDNSTLPRVPVIRVFGNGNVGQKTCVHIHQVYPYF 59
Query: 62 YIPF 65
++ +
Sbjct: 60 FVEY 63
>gi|328862001|gb|EGG11103.1| hypothetical protein MELLADRAFT_33498 [Melampsora larici-populina
98AG31]
Length = 1618
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIA-- 141
+ KVPVIR+FG G++ VHG Y Y+ + PI + + + ALN A
Sbjct: 48 LNKVPVIRIFGATPAGQRVLAHVHGAMSYFYVQYDG-PIDPDTVHRFIRRLGHALNYATA 106
Query: 142 --LGYKDSV--------QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLL 191
LG +S Q+V +I++CK P YG+H R FLKI + ++ DLL
Sbjct: 107 ASLGQVNSNKSADRSRHQYVAYIALCKGVPFYGFHVGYRYFLKIYCLQARFKKRMADLLR 166
Query: 192 NGAVF------------NER-------FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF 232
+G V N+R F+ +E HIP+ LQF +D+NLYG IE + F
Sbjct: 167 SGKVIDPSSHSPYQTSNNQRGSSARAGFKVFEEHIPFHLQFMLDHNLYGCGMIELSECSF 226
Query: 233 RSDSETSLPKLSHCQLEADVKAESIVVDMAANDSDVATS 271
R LP+ + + A ++ D+ S TS
Sbjct: 227 RLPLPDDLPQSPNSNVAGLFSAGNVPTDLLGPRSLTKTS 265
>gi|409083516|gb|EKM83873.1| hypothetical protein AGABI1DRAFT_32464 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1543
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 124/280 (44%), Gaps = 67/280 (23%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
MFS+ I ID+ +S P D H +VP++R+FG + G +TC+ VH V+PY
Sbjct: 1 MFSVQIYQIDYVLSPP-GPLDRSH-------YPRVPILRIFGQSSVGLRTCLHVHQVYPY 52
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
YI + + +LR HG F + +
Sbjct: 53 CYIEYQGD--------LDLR--------------------------HGTFMSCPVFINLR 78
Query: 121 PITETMLQQLAASIDKALN--IALGYK-----DSVQHVFHISICKKFPMYGYHADERTFL 173
P T ++Q K+LN IAL K Q+V + + K YG+H+ FL
Sbjct: 79 PRT---VKQYVRKFKKSLNHAIALSLKRDPNSTKSQYVCAVVLVKGVKFYGFHSQYSPFL 135
Query: 174 KILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
KI+L +P M+++ +L +G+V ++RF YESH+ + LQF D+ LYG ++ + R
Sbjct: 136 KIILLDPRLMNRVATILQSGSVMSQRFPVYESHLSFTLQFMCDFGLYGCGSVGISKAYRR 195
Query: 234 S--DSETSL-------------PKLSHCQLEADVKAESIV 258
+ SET + P SH +E DV + I
Sbjct: 196 AVLGSETDILPEQVTSFEPSPYPPQSHMPIELDVISPEIT 235
>gi|392571499|gb|EIW64671.1| hypothetical protein TRAVEDRAFT_42080 [Trametes versicolor
FP-101664 SS1]
Length = 1667
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 6/160 (3%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNI 140
+ +VPVIR++G++ G KTCV +H V+PY ++ + H I + +L S++ A+ I
Sbjct: 32 LHRVPVIRIYGDSSLGLKTCVHIHQVYPYFFVEYLEKMHPDIVNRYIAKLQHSLNHAIAI 91
Query: 141 ALGYKD---SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
+L + V I + K YG+HA+ FLK+ + +P +++ ++ +G +
Sbjct: 92 SLKRNPLSAKSKFVRAIVLVKGVHFYGFHANYAPFLKVHIADPAFVNRAVTIMQSGTIMK 151
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
RF+ YESHI Y+LQF D+ LYG I+ V RS E
Sbjct: 152 TRFRVYESHIQYLLQFLCDFGLYGCGWIDLGDVWQRSPDE 191
>gi|326481837|gb|EGE05847.1| polymerase zeta subunit [Trichophyton equinum CBS 127.97]
Length = 1651
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 123/258 (47%), Gaps = 49/258 (18%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVF-VHG---VFPYLYIPFHHEPITETMLQQLAAS 133
+LR+ I KVPVIRVFG G+K + G + Y Y H I ++ L AS
Sbjct: 33 QLRSGSI-KVPVIRVFGATETGQKGPLDPAEGQEYILSYRYKSAKHR-IVNAAIRSLHAS 90
Query: 134 IDKALNIALGYKD-----SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
ID AL AL Y+ S V +IS+ K P YGY+ R + K+ L P HM++L D
Sbjct: 91 IDHAL--ALSYRRNPFDHSTAFVAYISLVKGIPFYGYYVGYRYYFKVYLLNPLHMTRLAD 148
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--------------- 233
LLL GAV QPYESH+ +I Q+ DY+L+G + I + VKFR
Sbjct: 149 LLLQGAVMKRALQPYESHLQFIPQWMCDYSLHGCTFINCSKVKFRPPVPSYTSLENPDHL 208
Query: 234 -----------SDSETSLPKLSHCQLEADVKAESIVVDMAANDSD------VATSGGITR 276
SD T P+ SHC +E D+ + I+ D V ++ G
Sbjct: 209 WHDESIPQGDISDP-TEFPRQSHCAIEVDIHVQDILNRHEIRQRDIHHDFVVESNEG--- 264
Query: 277 YLSDVLLNSMRAILLGQE 294
++++ L+ S+R + +E
Sbjct: 265 FITEKLVPSLRVLWKDEE 282
>gi|268572039|ref|XP_002641218.1| Hypothetical protein CBG09082 [Caenorhabditis briggsae]
Length = 521
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL------N 139
++PV ++G G+K C+ +HGV PYL + + +T +LQ + A I+K + +
Sbjct: 30 RIPVFHIYGVTDSGQKACLHIHGVLPYLVLRAGGK-VTPIVLQGMRAKINKGIEKEIETS 88
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
K S +V+ + +YGY +E F+K+ P+++ K L +
Sbjct: 89 TGKASKFSADYVYKLETFSSRSLYGYQDEEEEFVKVYFSSPFYLQKATHSLGKEVIDKPL 148
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD 235
FQP+E+H+P+ LQF ID +++GM NI VKFR D
Sbjct: 149 FQPFEAHLPFHLQFFIDNSIFGMDNIHLKNVKFRVD 184
>gi|367009362|ref|XP_003679182.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
gi|359746839|emb|CCE89971.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
Length = 1486
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 15/164 (9%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-HEPITETMLQQLAASIDKALNIA--- 141
+VP+IRV+G+ G + VHGVFPY++IP+ + T T + Q A + L I
Sbjct: 52 RVPIIRVYGHLPSGHQVLCHVHGVFPYIFIPYDGQDSDTPTTMNQKCAQLHNVLEIKSQL 111
Query: 142 --LGYKD---------SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL 190
+ KD ++++ ++S+ K P YG++ F KI + + +KL DL+
Sbjct: 112 SMVKKKDIKQFKQKISGLKYIANVSVVKGVPFYGFNVGWSLFYKISVLDAGFTNKLSDLI 171
Query: 191 LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
+G +F + + +ES +P++LQF D+NL+G S ++ FR+
Sbjct: 172 RDGKMFEKPIETFESQLPFLLQFSADFNLFGCSWVDLEQCYFRT 215
>gi|336383793|gb|EGO24942.1| hypothetical protein SERLADRAFT_361773 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1560
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 22/202 (10%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASID 135
L N + +VP+IR++G + +K CV +H V+PY +I ++ +++ + QL S++
Sbjct: 25 LDNASLPRVPIIRIYGPSSTNQKACVHIHQVYPYFFIEYNGTINPDSVNRYIAQLTVSLN 84
Query: 136 KALNIALGYKDSV---QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
A+ I+ + Q+V I + K YG+H+ FLK+L+ +P +++ ++ +
Sbjct: 85 HAIAISTKRNPTSTNSQYVRAIILVKGVHFYGFHSSYTPFLKVLMADPSIVNRAVTIMQS 144
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---DSET-------SLPK 242
G V RF+ YESH+ YILQF D+ LYG I V R D+E S PK
Sbjct: 145 GTVMRTRFRVYESHLSYILQFMCDFGLYGCGWINLGEVHQRGHDDDAEVRQQASSFSSPK 204
Query: 243 L------SHCQLEADVKAESIV 258
+ S LE DV + I+
Sbjct: 205 VSPHFRQSRMSLEVDVISHQIL 226
>gi|409051564|gb|EKM61040.1| hypothetical protein PHACADRAFT_204189 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1614
Score = 94.7 bits (234), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 16/196 (8%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI---TETMLQQLAASID 135
L N + +VP+IR++G + GKK C+ VH V+PY ++ + + + +L+ S++
Sbjct: 25 LDNGALPRVPIIRIYGESSVGKKACLHVHQVYPYFFVEYDGQVKPGNVNNYIAKLSHSLN 84
Query: 136 KALNIALGYK---DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
A++++L + Q V I + K YG+HA FLK+ + +P M++ L+ +
Sbjct: 85 HAISLSLKRNPNSHNSQVVRAIVLVKGVHFYGFHASYSPFLKVHIADPALMNRAVTLMRS 144
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET--------SLP--K 242
G V F+ YESH+ + LQF D+ LYG I+ V R E S P +
Sbjct: 145 GTVMKTHFRIYESHLSFPLQFMCDFGLYGCGWIDLAEVWVRGQDEDEEQQIASRSSPYYR 204
Query: 243 LSHCQLEADVKAESIV 258
+ LE DV A I+
Sbjct: 205 QTRMPLELDVAAHQIL 220
>gi|341883887|gb|EGT39822.1| hypothetical protein CAEBREN_25467 [Caenorhabditis brenneri]
Length = 1775
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFHHEPITETMLQQLAASIDKAL 138
K+PV ++G G+K C+ VHGV PYL + PF + M ++ I+K +
Sbjct: 1088 KIPVFHIYGVTDSGQKACLHVHGVLPYLVLRVGGKATPF----VLTAMRAKVNRGIEKEI 1143
Query: 139 NIALGYKD---SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
++ G K+ + +V+ + +YGY +E F+++ P+++ K L +
Sbjct: 1144 EMSSGGKNNRYTPDYVYKMEQFSSRSLYGYQDEEEDFVRVYFSSPWYLQKAVHSLGKEVI 1203
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD 235
FQP+E+H+P+ LQF ID +++GM NI VKFR D
Sbjct: 1204 DKPLFQPFEAHVPFHLQFFIDNSIFGMDNIHLKRVKFRID 1243
>gi|353237439|emb|CCA69412.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Piriformospora indica DSM 11827]
Length = 1531
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 6/161 (3%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM---LQQLAASIDK 136
+ +V ++VPV+R+FG G++ C+ VH VFPY YI + E + + +L +++
Sbjct: 39 QGIVARRVPVVRIFGTTSGGERACLHVHQVFPYFYISYEGSLNPEAVNRYISRLHHALNS 98
Query: 137 ALNIALG--YKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
A+ I+L +++++ Q V I + K YG+H FLKI+L P +S+ +L +G
Sbjct: 99 AIAISLNRNHQNALGQFVRAIVLVKGIHFYGFHVGYSPFLKIMLTIPDQISRAILILQSG 158
Query: 194 AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
+V + +E+H+ Y LQF D+NLYG ++ V +R+
Sbjct: 159 SVMGRKMNVFEAHLSYPLQFMCDFNLYGCDWVDLRDVHYRT 199
>gi|355716156|gb|AES05520.1| REV3-like, catalytic subunit of DNA polymerase zeta [Mustela
putorius furo]
Length = 89
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 140 IALGYKDSV-QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
+ALG S QHVF +S+ P YGYH ER F+KI LY P + ++ +LL +GA+ N+
Sbjct: 1 VALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYLYNPAMVKRICELLQSGAIMNK 60
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIE 226
+QP+E+HIPY+LQ IDYNLYGM+ I
Sbjct: 61 FYQPHEAHIPYLLQLFIDYNLYGMNLIN 88
>gi|395334320|gb|EJF66696.1| hypothetical protein DICSQDRAFT_176481 [Dichomitus squalens
LYAD-421 SS1]
Length = 1668
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASID 135
L N + +VPVIR++G++ G K C+ VH V+PY ++ + + + + +L S++
Sbjct: 25 LDNSSLYRVPVIRIYGDSSIGLKACLHVHQVYPYFFVEYLGKMNPDVVNRYVTKLKHSLN 84
Query: 136 KALNIALGYKDSV---QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
A+ I++ Q V + + K YG+HA+ FLK+ + +P ++++ ++ +
Sbjct: 85 HAIAISMKRNPQSPKSQFVRAVVLVKGVHFYGFHANYSPFLKVHIADPAYVNRAVTIMQS 144
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
G + RF+ YESH+ YILQF D+ LYG I+ V R E
Sbjct: 145 GTIMKTRFRVYESHLSYILQFLSDFGLYGCGWIDLGEVWQRGKDE 189
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 4 MNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+ I ID+ MS P L N + +VPVIR++G++ G K C+ VH V+PY ++
Sbjct: 10 VRINQIDYAMSAP--------GPLDNSSLYRVPVIRIYGDSSIGLKACLHVHQVYPYFFV 61
Query: 64 PF 65
+
Sbjct: 62 EY 63
>gi|255713872|ref|XP_002553218.1| KLTH0D11682p [Lachancea thermotolerans]
gi|238934598|emb|CAR22780.1| KLTH0D11682p [Lachancea thermotolerans CBS 6340]
Length = 1500
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP-----ITETMLQQLAAS 133
L N VPVIRV+G+ G +HG FPY+Y+P+ E ++ QL +
Sbjct: 44 LPNRQFNHVPVIRVYGSLPSGHNVLCHIHGAFPYIYVPYDGEKGDSAQTIQSRCTQLHSC 103
Query: 134 IDKALNIAL------------------GYKDSVQHVFHISICKKFPMYGYHADERTFLKI 175
++ L + G+ ++++ V +S + P YGYH F KI
Sbjct: 104 LETKLKESYNRKGSAEEEEGKEKEKKDGFPENLKFVADVSPIRAVPFYGYHVGYSVFYKI 163
Query: 176 LLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L +K + L G +R Q +E+HIP++LQF DYNL+G S ++ + FRS
Sbjct: 164 SLLSSATTTKTAEFLREGKATGKRSQVFEAHIPFLLQFSADYNLFGCSWLKLSKCFFRS 222
>gi|254569028|ref|XP_002491624.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|238031421|emb|CAY69344.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|328351871|emb|CCA38270.1| DNA polymerase zeta subunit [Komagataella pastoris CBS 7435]
Length = 1495
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 47/237 (19%)
Query: 4 MNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+ I+ +D + S P + F+ L + + PV+RVFG G CV +H V+PYL I
Sbjct: 5 VQIICVDSYQSDPPSQFE------EKLGLPQAPVLRVFGKLETGHTCCVHIHNVYPYLLI 58
Query: 64 PFHHEPITETIVHSELRNLVIQKVPVIRVFG----NNVEGKKTCVFVHGVFPYLYIPFHH 119
+ + + LR+ + +K+ + FG N ++G++ +
Sbjct: 59 QWEGDDL------ENLRHEIDEKLRM--SFGKQEFNGLDGQE---------------YQE 95
Query: 120 EPITETMLQQLAASIDKALNIALGYKDSVQHVFHISI--CKKFPMYGYHADERTFLKILL 177
P T +++ + I + Q F I K P YG+H F+KI L
Sbjct: 96 FPETNSVISENPELIPQ------------QQTFIADIYRVKGVPFYGFHVMHSAFVKICL 143
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
P ++ KL LL G +F + QP+ESHIPY +QF DYNL+ ++ +RS
Sbjct: 144 LNPKYVPKLSKLLSEGKIFGSKIQPFESHIPYTMQFLTDYNLFPCDWLKIKQWYWRS 200
>gi|324500783|gb|ADY40359.1| DNA polymerase zeta catalytic subunit, partial [Ascaris suum]
Length = 1598
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPY----LYIPFHHEPITETMLQQLAASIDK-ALNIA 141
+P+IR+FG G+K CV VHGVFPY L P +E + E + LA+ + NI
Sbjct: 32 LPIIRIFGILSSGEKCCVHVHGVFPYIVLRLGTPLTYE-VNEVLRSTLASLVAHHRPNIR 90
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQ 201
++ ++ I +YGY+ ++ F+K+L P ++ + ++L A+ + Q
Sbjct: 91 TELIEAA--IYDILPFSAKSLYGYYKEDDYFVKVLFTSPQYLRLVSNVLYQEAISSPLLQ 148
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
YE+H+PY++QF IDY+++GM I FN VKFR
Sbjct: 149 VYEAHVPYLMQFFIDYSIFGMDLIHFNDVKFR 180
>gi|50305361|ref|XP_452640.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641773|emb|CAH01491.1| KLLA0C09911p [Kluyveromyces lactis]
Length = 1451
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-HEPITETMLQQLAASIDKALNIAL-- 142
+VPV+R +G G K + HG+FPY++I + H ++++ S+ K L +
Sbjct: 49 QVPVLRFYGCLSTGHKVLIHCHGIFPYIFIKYDGHSNDKASVIRNRCTSLHKILETRMIE 108
Query: 143 -----GYKD---SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA 194
+K+ S++++ ++S+ K P YGYH + KI L + +KL +LL +G
Sbjct: 109 TFTKTDFKEKLTSLKYIANVSVVKGVPFYGYHVGYEPYYKITLLNGSYSNKLSELLRDGR 168
Query: 195 VFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+F + +E+HIPY+LQ DYNL+G ++ + FR
Sbjct: 169 IFTSKVDVFEAHIPYLLQMMADYNLFGCGWLKLSKCYFR 207
>gi|340507728|gb|EGR33649.1| hypothetical protein IMG5_047210 [Ichthyophthirius multifiliis]
Length = 1612
Score = 92.4 bits (228), Expect = 4e-16, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 28/222 (12%)
Query: 22 PVHSELRNLV---IQKVPVIRVFGNNIEGKKTCVFVHGV-FPYLYIPFHHEPITETIVHS 77
P + EL N I++VP+IR+FG N G+K C+ +H V ++ I F+ +
Sbjct: 20 PFYKELTNYKGNKIKQVPIIRLFGANKYGQKCCLNIHKVQLLFIQICFNFQ--------Q 71
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITET------MLQQLA 131
++ +L + + IR F N+ K+ ++ + + + I + QQL
Sbjct: 72 KVFSLFLYQ---IRKFRRNIGKKQYLFYIQSKIFFFFYQKKQKKIYKKDDYLIQFGQQLD 128
Query: 132 ASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLL 191
+DK LNI G K S++HV K+ +YG++ E++FLKIL P H K++++L
Sbjct: 129 EILDKLLNIKQGIK-SIEHV------KRKDIYGFYKKEQSFLKILYINPSHNKKIQEILT 181
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
NGA+ N ++Q YE H+ + + F D ++GM I KFR
Sbjct: 182 NGALNNIKYQIYEGHLTFFMHFYSDNCIFGMKEITVMNFKFR 223
>gi|363749421|ref|XP_003644928.1| hypothetical protein Ecym_2378 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888561|gb|AET38111.1| Hypothetical protein Ecym_2378 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1469
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 62 YIPFHHEP-ITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
Y + P I + + L N + P+IR++G+ G +HGVFPY+++ F
Sbjct: 17 YDTYQSSPTILDRQCGNSLPNRKFLEAPIIRLYGSLPGGYTVLCHLHGVFPYIFVRFDSN 76
Query: 121 -------PITETMLQQLAASIDKALNIALGYK------------DSVQHVFHISICKKFP 161
PI + Q+L ++ AL A + +++V ++S+ K P
Sbjct: 77 QDNSINVPINDC--QELHILLELALRKANNTQPNGAPERSEETIQDLRYVANVSLVKGIP 134
Query: 162 MYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYG 221
YG+H F KI L P ++ L D+L G +F+++ + YESHIPY+LQ DYNL+G
Sbjct: 135 FYGFHVGWSAFYKISLLNPNYVVTLSDMLRQGLLFDKKLEVYESHIPYLLQMSTDYNLFG 194
Query: 222 MSNIEFNMVKFR 233
S ++ + FR
Sbjct: 195 CSWLKLSKCYFR 206
>gi|302697887|ref|XP_003038622.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
gi|300112319|gb|EFJ03720.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
Length = 1541
Score = 92.0 bits (227), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 82/141 (58%), Gaps = 7/141 (4%)
Query: 88 PVIRVFG-NNVEGKKTCVFVHGVFPYLYIPFHHE---PITETMLQQLAASIDKALNIALG 143
P+IR++G +++ G+K CV VH V+PY +I + + + + +L S+D A+ ++L
Sbjct: 45 PIIRIYGASSITGRKACVHVHQVYPYFFIEYKGDLDPKCVKQYIAKLTHSLDHAIAVSLK 104
Query: 144 Y---KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
+ Q+V I + K YGYH+ FLK+L+ +P + + +L + ++ + +F
Sbjct: 105 RDPASNKAQYVRAIVLVKGIHFYGYHSTYSPFLKVLMIDPNIVRRAVTILQSPSIMSTQF 164
Query: 201 QPYESHIPYILQFCIDYNLYG 221
+ YESH+ Y LQF D+ LYG
Sbjct: 165 RVYESHLSYYLQFLSDFGLYG 185
>gi|302505098|ref|XP_003014770.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
gi|291178076|gb|EFE33867.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
Length = 1660
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 102/212 (48%), Gaps = 50/212 (23%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+LR+ I KVPVIRVFG G+K+ H I ++ L ASID A
Sbjct: 33 QLRSGSI-KVPVIRVFGATETGQKSA--------------KHR-IVNAAIRSLHASIDHA 76
Query: 138 LNIALGYKD-----SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
L AL Y+ S V +IS+ K P YGY+ R + K+ L P HM++L DLLL
Sbjct: 77 L--ALSYRRNPSDHSAAFVAYISLVKGIPFYGYYVGYRYYFKVYLLNPLHMTRLADLLLQ 134
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR------------------- 233
GAV QPYESH+ +I Q+ DY+L+G + I + VKFR
Sbjct: 135 GAVMKRALQPYESHLQFIPQWMCDYSLHGCAYINCSKVKFRPPVPSHISLENPDHLWHDE 194
Query: 234 -------SDSETSLPKLSHCQLEADVKAESIV 258
SD + P+ SHC +E D+ + I+
Sbjct: 195 SIPQRDISDP-SEFPRQSHCAIEVDIHVQDIL 225
>gi|302658851|ref|XP_003021124.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
gi|291185005|gb|EFE40506.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
Length = 1594
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 102/212 (48%), Gaps = 50/212 (23%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+LR+ I KVPVIRVFG G+K+ H I ++ L ASID A
Sbjct: 33 QLRSGSI-KVPVIRVFGATETGQKSA--------------KHR-IVNAAIRSLHASIDHA 76
Query: 138 LNIALGYKD-----SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
L AL Y+ S V +IS+ K P YGY+ R + K+ L P HM++L DLLL
Sbjct: 77 L--ALSYRRNPSDHSAAFVAYISLVKGIPFYGYYVGYRYYFKVYLLNPLHMTRLADLLLQ 134
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR------------------- 233
GAV QPYESH+ +I Q+ DY+L+G + I + VKFR
Sbjct: 135 GAVMKRALQPYESHLQFIPQWMCDYSLHGCAYINCSKVKFRPPVPSHISLENPDHLWHDE 194
Query: 234 -------SDSETSLPKLSHCQLEADVKAESIV 258
SD + P+ SHC +E D+ + I+
Sbjct: 195 SIPQRDISDP-SEFPRQSHCAIEVDIHVQDIL 225
>gi|189202408|ref|XP_001937540.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984639|gb|EDU50127.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1633
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 130 LAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKL 186
L SID AL A Y +V HI++ K P +GY + FLK+ + P HM++
Sbjct: 26 LRTSIDHALASAYRRNAYDGKSIYVGHITLVKGVPFFGYSVGYKIFLKVYMLNPMHMTRF 85
Query: 187 EDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---DSE---TSL 240
DLL GA+ N FQPYESH+ ILQ+ DYNLYG I V+FR DSE TS+
Sbjct: 86 ADLLYQGAILNRVFQPYESHLQNILQWMCDYNLYGCDYINCAKVRFRGPVPDSEEIDTSV 145
Query: 241 -------------------PKLSHCQLEADVKAESIV 258
P+ SH LE D+ + I+
Sbjct: 146 HKWHDASIPDEFMAQADQYPRQSHSTLEVDICVQDIL 182
>gi|324120732|dbj|BAJ78757.1| DNA polymerase delta catalytic subunit [Thrips palmi]
Length = 1091
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 22/190 (11%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPITETMLQQLAASIDK 136
I VPV+R++G +EG C VHG PY ++ H +P +++ + + A +
Sbjct: 101 IGPVPVMRLYGVTMEGNSVCCHVHGFSPYFFVSAPKGFNNSHCKPFKDSLNKAVLADMK- 159
Query: 137 ALNIALGYKDSVQH-VFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGA 194
G +D+VQ V + I KK +YGY D+ + FL++ + P ++ + LL G
Sbjct: 160 ------GNRDNVQEAVLAVEIVKKQSLYGYRGDDMQNFLRVTVALPRLIAASKRLLEKGD 213
Query: 195 VFNE----RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQL 248
+F F YES+I + ++F +D N+ G + IE K RS + P S CQ+
Sbjct: 214 IFTALGPHAFTSYESNIDFDIRFMVDANMVGCNWIELPAGAWKMRSKDSKTKPFASRCQI 273
Query: 249 EADVKAESIV 258
E DV E ++
Sbjct: 274 EVDVSWEKLI 283
>gi|366991433|ref|XP_003675482.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
gi|342301347|emb|CCC69115.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
Length = 1473
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE-------------PITETMLQQLAA 132
+VPVIR++G+ G + +HGV PY+++ ++ E + E + +Q++A
Sbjct: 49 RVPVIRIYGSLPSGHQVLCHIHGVLPYIFVQYNGEVSDSNAIMNQKCAQLQELLEKQISA 108
Query: 133 SIDKALN--IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL 190
S+ N + S++++ ++S+ K P Y +H F KI + P ++++ DLL
Sbjct: 109 SMKNRKNNQQSASNASSLEYIANVSVTKAVPFYAFHVGWTLFYKISILNPSFVNRIADLL 168
Query: 191 LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+G + + YE+HIPY+LQF D+NL+G I+ FR ++ + + +
Sbjct: 169 RDGNLNLAHNEVYEAHIPYLLQFSADFNLFGCDWIKLEKCYFRKPVLNNILGIDNLMQDE 228
Query: 251 DVKAESIVVDMAANDSDVATSGGITR 276
D+K ++ D +V S R
Sbjct: 229 DLK--KVLNQFNEQDQNVLESKAFPR 252
>gi|440804295|gb|ELR25172.1| polymerase (DNA directed), delta 1, catalytic subunit [Acanthamoeba
castellanii str. Neff]
Length = 1003
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 9/179 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIALGYK 145
VP+I ++G EG V +HGV PY Y+P H +E + +++ + + A G K
Sbjct: 9 VPIIHMYGLTREGHSVLVHLHGVLPYFYVPAPHAQFSEDDCESFRLALNRRCASHARGAK 68
Query: 146 DSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN-----ER 199
+ +V +++ +K + GYHAD+R FL+I + P + +L G VF+
Sbjct: 69 ERKDYVIAVAVEQKESIMGYHADKRKPFLRITMAMPPLVPAARGILEAGLVFDGYPNGRT 128
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
FQ YES+I ++L+F ID + G + +E K+ + K+SHCQ E K I
Sbjct: 129 FQTYESNIAFVLRFMIDKKMTGAAWLELAANKYEVVPDDQ--KVSHCQFELHAKETDIT 185
>gi|299755533|ref|XP_002912108.1| REV3 [Coprinopsis cinerea okayama7#130]
gi|298411267|gb|EFI28614.1| REV3 [Coprinopsis cinerea okayama7#130]
Length = 1574
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL 138
L N+ + VP++RV+GN+ G KTCV +H V+PY +I + + +++ + K+L
Sbjct: 30 LDNVNMPVVPILRVYGNSSTGSKTCVHIHQVYPYFFIDYVGS-VRPKEVKRYIHKLVKSL 88
Query: 139 N--IALGYKDS-----VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLL 191
N IAL K + Q++ + K P YG+H+ +LKI + +P +++ +L
Sbjct: 89 NHAIALSLKRNPESPKSQYIRAAILVKGVPFYGFHSSYSPYLKIYVADPALVNRAVTILR 148
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS---LP------- 241
+G V RF+ YESH+ + LQF D+ LYG ++ R + ET P
Sbjct: 149 SGIVMKARFRIYESHLSFPLQFMCDFGLYGCGFLDMEGGWERCNDETDDVHSPLFQRSPH 208
Query: 242 -KLSHCQLEADVKAESIVVDMAANDSDVATSGG 273
+ S LE DV A I+ A V +GG
Sbjct: 209 FRQSTLPLEIDVIAPQILNRHALTPRPVPFTGG 241
>gi|307106793|gb|EFN55038.1| hypothetical protein CHLNCDRAFT_14884, partial [Chlorella
variabilis]
Length = 85
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 57/85 (67%)
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIP 208
Q VF +++ + P YGYHA+E ++K+L+Y P +S+ +LL GAV +QP+ESH+P
Sbjct: 1 QRVFSLTLVRGTPFYGYHAEECVWIKVLMYNPRDVSRAAELLRGGAVMGRAWQPHESHLP 60
Query: 209 YILQFCIDYNLYGMSNIEFNMVKFR 233
Y+LQ ID+NL GM + + +FR
Sbjct: 61 YLLQLKIDFNLSGMGWLRLSQARFR 85
>gi|324120740|dbj|BAJ78761.1| DNA polymerase delta catalytic subunit [Bemisia tabaci]
Length = 1094
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP+ R+FG +EG C VHG PY ++ E+ + ++++ LN G K
Sbjct: 109 VPIFRIFGITMEGNSVCAHVHGFSPYFFVT-APAGFNESHCRPFKDALNRTILNDMRGNK 167
Query: 146 DSVQH-VFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF----NER 199
+Q V + I +K M+GY DE + FLKI + P ++ + LL AVF N
Sbjct: 168 SGIQEAVLMVEIVRKQTMFGYWGDEVKDFLKITVALPRLIAAGKRLLEKEAVFPSFPNHA 227
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
++ +ES+I + ++F +D N+ G S +E ++ + L S CQ+E DV E ++
Sbjct: 228 YKAFESNIDFDIRFMVDKNIVGCSWVELGKGTWQRRPHSDLRVTSRCQIEVDVSCEDLI 286
>gi|406696978|gb|EKD00248.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 8904]
Length = 1169
Score = 89.4 bits (220), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 82 LVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITET----MLQQLAASI 134
L+ +VPV+RVFG + +K C VH +PY ++PF +P+ + Q+ A S+
Sbjct: 25 LLPGQVPVLRVFGTTPKNQKVCANVHLCYPYFFVPFPMDSPDPLRPERVIRLCQRFAVSL 84
Query: 135 DKALNIAL---------------GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ A+ +AL G HV + + K P YGYH FLK+ L
Sbjct: 85 NHAICLALRQNPTGPTNAANFAGGTDPKHLHVVSVMLVKGTPFYGYHLGYSYFLKVSLAN 144
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR------ 233
P + + L V +QP+E+H+ ++LQF D++LYG ++ + FR
Sbjct: 145 PSRVRVAVEQLHKPVVLGREWQPHEAHLSHVLQFMCDFDLYGCGFLDLSGGTFREPLPEP 204
Query: 234 ---SDSETSL-------------------PKLSHCQLEADVKAESIV 258
+ E+SL + +HC LE DV I+
Sbjct: 205 ASSQEGESSLTVNTFTVREDMVYPMGLSPARDTHCDLEIDVLPHQIM 251
>gi|365991463|ref|XP_003672560.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
gi|343771336|emb|CCD27317.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
Length = 1499
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 23/165 (13%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-----------------HEPITETMLQ 128
+VPVIR++GN G + VHGV PY+++ + H + + +
Sbjct: 49 QVPVIRIYGNLPTGHQVLCHVHGVTPYIFVEYDGKLTDSSVVLNQKCTQLHTQLEQIVFD 108
Query: 129 QLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+ + K ++L Y + ++S+ K P YG+H + F KI + P ++++ D
Sbjct: 109 SMKNNNKKTTGMSLDY------ISNVSVVKAVPFYGFHVGWQLFYKISILNPSFVNRIAD 162
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
++ +G + ++ + +E+HIPY+LQF DYNL+G I+ FR
Sbjct: 163 IIRDGKLLIKKDEVFEAHIPYLLQFSADYNLFGCDWIKLKKCHFR 207
>gi|118369112|ref|XP_001017761.1| DNA polymerase family B containing protein [Tetrahymena
thermophila]
gi|89299528|gb|EAR97516.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1907
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGV--------------------------FPYLYIPF 117
+Q+VP+IR+FG N G+K C+ VH V F Y +
Sbjct: 74 VQQVPIIRLFGANKYGQKCCLNVHNVPLDVQFLIMLKSILFLYYIDREKLDSFLYEFCSK 133
Query: 118 HHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL 177
E + Q A + G+K+ Q V I K YGYHA + F+KI+
Sbjct: 134 VEECFQKVYSQSNAKNQPNKAQKYAGFKNLQQIVHKAEIVYKKDYYGYHAYDEPFIKIIY 193
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSD 235
Y P H K++++L+ GA+ N RFQ Y+ HI Y + F D +YGM + KFR D
Sbjct: 194 YNPSHGKKIQEILIAGAIMNLRFQIYDGHISYFMHFYSDNYIYGMKEVYAINYKFRKD 251
>gi|393240252|gb|EJD47779.1| hypothetical protein AURDEDRAFT_144423 [Auricularia delicata
TFB-10046 SS5]
Length = 1503
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 79 LRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPIT-ETMLQQLAASID 135
L N ++KVP+IRVFG G CV +H ++PY ++ P +P T + L L I+
Sbjct: 25 LDNKEVRKVPIIRVFGTTDGGVPACVHLHQLYPYFFVSYPGDTDPRTVQEYLHNLRRGIN 84
Query: 136 KALNIALGYKDSVQHVFHIS---ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
AL + + + +++ + K YG+H+ FLKI LY+P +++ L
Sbjct: 85 HALALQMKLPPNSPKAYYVKRIILVKGVDFYGFHSGYTPFLKIYLYDPSLVTRCVTALRT 144
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE-------TSLPKLSH 245
G++ RF YESH + Q D+ LYG + +E V R DS +S P +
Sbjct: 145 GSIMRTRFTIYESHHVFKDQVMCDFALYGCNWLELGEVFQRGDSMEDTSWGVSSYPPQTR 204
Query: 246 CQLEADVKAESIV 258
LE D A I+
Sbjct: 205 MSLELDACAHQIL 217
>gi|346977462|gb|EGY20914.1| DNA polymerase zeta catalytic subunit [Verticillium dahliae
VdLs.17]
Length = 1499
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 129 QLAASIDKALNIAL---GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSK 185
+L SID AL ++ Y + + V I++ K P YG+H + FLKI ++ P M++
Sbjct: 20 RLHLSIDHALAVSYRRDQYSGNAKFVARITLVKGIPFYGFHVGYKFFLKIYMFNPIVMTR 79
Query: 186 LEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L DL G + +FQPYE+H+ Y+LQF D+NLYG ++ + V FR+
Sbjct: 80 LADLFQQGVIMKRKFQPYEAHLQYLLQFMTDFNLYGCGFLDASTVHFRA 128
>gi|392576217|gb|EIW69348.1| hypothetical protein TREMEDRAFT_30704 [Tremella mesenterica DSM
1558]
Length = 1864
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE---PITETMLQQLAASIDKALNIAL 142
++PVIR+FG G+K C +H +PY ++PF + P+ + +L + +LN A+
Sbjct: 49 QMPVIRIFGTTSHGQKICANIHLCYPYFFVPFPMDSVDPLRPERVGRLCSRFGVSLNHAI 108
Query: 143 -------------------GYKDSVQ-HVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
G D HV + + K P YGYH +LK+ L P
Sbjct: 109 CLALRQTPGASQQASDKYAGGTDPRHLHVLSVMLVKGVPFYGYHVGWSYWLKVSLSNPGR 168
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
M + L V +QP+E+H+ ++LQF D++LYG +E FR
Sbjct: 169 MWVALEQLRKPVVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELEGGTFR 219
>gi|163916151|gb|AAI57513.1| Unknown (protein for MGC:180510) [Xenopus (Silurana) tropicalis]
Length = 911
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP+IR+FG EG C +HG PY Y+P H Q+ + K LN A+
Sbjct: 116 VPIIRMFGITEEGNSVCCHIHGFAPYFYVPCH-----TGFKQEDLSDFKKELNSAVIKDM 170
Query: 143 -GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER 199
KDS+ Q V + +C K MYGYH + F+KI + P ++ + LL G F
Sbjct: 171 RSNKDSISQAVLAVDVCHKENMYGYHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRH 230
Query: 200 ----FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLP------KLSHCQ 247
+Q YE++I + ++F +D ++ G + IE K+ R +S+ P K+S Q
Sbjct: 231 PTHCYQAYEANIDFEIRFMVDNDIVGCNWIELPAGKYRLRKESQDEGPSKENPSKVSLAQ 290
Query: 248 LEADVKAESIVVDMAAND 265
+E D+ ++ A D
Sbjct: 291 IEVDISWADLISHPAEGD 308
>gi|113931510|ref|NP_001039204.1| DNA-directed DNA polymerase delta 1 [Xenopus (Silurana) tropicalis]
gi|89268922|emb|CAJ83173.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[Xenopus (Silurana) tropicalis]
Length = 1109
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP+IR+FG EG C +HG PY Y+P H Q+ + K LN A+
Sbjct: 116 VPIIRMFGITEEGNSVCCHIHGFAPYFYVPCH-----TGFKQEDLSDFKKELNSAVIKDM 170
Query: 143 -GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER 199
KDS+ Q V + +C K MYGYH + F+KI + P ++ + LL G F
Sbjct: 171 RSNKDSISQAVLAVDVCHKENMYGYHGKKIIPFMKITMALPRLIAPAKRLLEQGLRFGRH 230
Query: 200 ----FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLP------KLSHCQ 247
+Q YE++I + ++F +D ++ G + IE K+ R +S+ P K+S Q
Sbjct: 231 PTHCYQAYEANIDFEIRFMVDNDIVGCNWIELPAGKYRLRKESQDEGPSKENPSKVSLAQ 290
Query: 248 LEADVKAESIVVDMAAND 265
+E D+ ++ A D
Sbjct: 291 IEVDISWADLISHPAEGD 308
>gi|255542648|ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
Length = 2066
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 54/215 (25%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
I +S + + +VPV+R++G+ G+KTC+ VH L+ A S
Sbjct: 31 ICYSSFQGGKVNEVPVLRIYGSTPAGQKTCLHVH------------------RLKGNAGS 72
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
QHV S+ + YGYH+ E F KI LY P+ +S+ +LLL G
Sbjct: 73 -------------RRQHVHGCSLVRARKFYGYHSSEELFFKIYLYYPHDVSRAANLLLGG 119
Query: 194 AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKL-----SHCQL 248
A+ ++ QP+E+HIP+ILQF L G+S +E +L +L CQ
Sbjct: 120 AILDKSLQPHEAHIPFILQF-----LAGLS------------AEKALGELLPFFEGDCQ- 161
Query: 249 EADVKAESIVVDMAANDSDVATSGGITRYLSDVLL 283
E V + + +ND A G T Y +D L
Sbjct: 162 EKKVVQNKALPNTNSNDQQEAIMGVPTHYQNDGSL 196
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVH 55
FS+ IV+ID++M+ PI + D +S + + +VPV+R++G+ G+KTC+ VH
Sbjct: 11 FSVRIVSIDYYMAPPIPNIDICYSSFQGGKVNEVPVLRIYGSTPAGQKTCLHVH 64
>gi|359487804|ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 31/140 (22%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
I +S + ++++VPVIR++G+ G+KTC+ VH L+ A S
Sbjct: 31 ICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVH------------------RLKGNAGS 72
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
QHV S+ + YGYH+ E F+KI LY P+ +S+ +LLL G
Sbjct: 73 -------------KRQHVHGCSLVRAKNFYGYHSSEELFVKIYLYHPHDVSRAANLLLGG 119
Query: 194 AVFNERFQPYESHIPYILQF 213
+V ++ QP+ESHIP++LQF
Sbjct: 120 SVLDKSLQPHESHIPFLLQF 139
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 40/55 (72%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVH 55
+FS+ IV++D++M+ PI D +S + ++++VPVIR++G+ G+KTC+ VH
Sbjct: 10 IFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVH 64
>gi|262176855|gb|ACY27482.1| DNA polymerase delta [Xenopus laevis]
Length = 1108
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 23/190 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP+IR+FG EG C +HG PY Y+P H Q+ + K LN A+
Sbjct: 116 VPIIRMFGITEEGNSVCCHIHGFAPYFYVPCHT-----GFKQEDLSDFKKELNTAVIKDM 170
Query: 143 -GYKDSV-QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
KD + Q V + +C K MYGYH F+KI + P ++ + LL G F +
Sbjct: 171 RSNKDGISQAVLAVDVCHKENMYGYHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRQ 230
Query: 200 ---FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLP------KLSHCQL 248
+Q YE++I + ++F +D ++ G + IE K+ R +S+ P K+S Q+
Sbjct: 231 PTHYQAYEANIDFEIRFMVDNDIVGCNWIELPAGKYRVRKESQDEEPSKDNPSKVSLAQI 290
Query: 249 EADVKAESIV 258
E D+ ++
Sbjct: 291 EVDISWADLI 300
>gi|58264096|ref|XP_569204.1| zeta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223854|gb|AAW41897.1| zeta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1940
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITE----TMLQQLAASIDKALN 139
VPVIR+FG +K C +H +PY ++P+ +P+ + Q+ A S++ A+
Sbjct: 70 VPVIRIFGTTSSSQKICANIHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNHAIC 129
Query: 140 IAL-----------GYKDSVQ----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
+AL Y V HV + + K P YGYH FLKI L P +
Sbjct: 130 LALRQNPTSAANNTNYGGGVDPKHLHVVSVILVKGTPFYGYHLGFDYFLKINLANPARLH 189
Query: 185 KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KL 243
+ L V +QP+E+H+ ++LQF D++LYG +E FR P K
Sbjct: 190 IALEQLRKPNVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELGGGTFREPVPGLSPAKD 249
Query: 244 SHCQLEADV 252
S LE D+
Sbjct: 250 SFTSLEIDI 258
>gi|410082397|ref|XP_003958777.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
gi|372465366|emb|CCF59642.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
Length = 1499
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 23/170 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-HEPITETMLQQLAASIDKALNIAL--- 142
VP IRV+G G + +HGVFPY+++ + +E + T + Q ++ L +
Sbjct: 51 VPSIRVYGFLPTGHQVLCHIHGVFPYIFVKYDGNESDSLTEISQKCTNLHLLLERKMTEL 110
Query: 143 ------GYKDSVQHV-------------FHISICKKFPMYGYHADERTFLKILLYEPYHM 183
G K +V V ++S+ K P YG++ F KI L P +
Sbjct: 111 VKKKGRGNKPTVNEVGNDIEHIRGLNYIANVSLIKGIPFYGFNMGYTLFYKITLLNPSYS 170
Query: 184 SKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
++L DL+ + A+F + +ESHIPY+LQF +D+NL+G S I N FR
Sbjct: 171 NRLSDLIRDKAIFATARETFESHIPYLLQFSMDFNLFGCSWIHLNNCYFR 220
>gi|405118606|gb|AFR93380.1| atrophin-1 family protein [Cryptococcus neoformans var. grubii H99]
Length = 1997
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITE----TMLQQLAASIDKALN 139
VPVIR+FG +K C +H +PY ++P+ +P+ + Q+ A S++ A+
Sbjct: 70 VPVIRIFGTTSSSQKICANIHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNHAIC 129
Query: 140 IAL-----------GYKDSVQ----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
+AL Y V HV + + K P YGYH FLKI L P +
Sbjct: 130 LALRQNPTSAANNTNYGGGVDPKHLHVVSVILVKGTPFYGYHLGYDYFLKINLANPARLH 189
Query: 185 KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ L V +QP+E+H+ ++LQF D++LYG +E FR
Sbjct: 190 IALEQLRKPNVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELGGGTFR 238
>gi|326426951|gb|EGD72521.1| DNA polymerase zeta catalytic subunit [Salpingoeca sp. ATCC 50818]
Length = 2703
Score = 85.5 bits (210), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 151 VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYI 210
V +I + K+ YGYH E+ FLKI L P+ + + DLL G + N +QP+E+HIPY
Sbjct: 304 VANIEVVKRINFYGYHEGEQDFLKISLINPWLVRRTADLLQEGVIGNIFYQPFEAHIPYF 363
Query: 211 LQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLS 244
LQF DYNL GM+ I FR T LP+LS
Sbjct: 364 LQFMTDYNLQGMNYIHTKHALFR----TPLPELS 393
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
FS+ I+ DF + I D V+S R + + PVIRVFG G+K C VHGV+PY+
Sbjct: 152 FSIRIIDADFQVRPSIPQLDEVYSVFRCCPLPRAPVIRVFGTTPRGQKACCHVHGVYPYI 211
Query: 62 YIPF 65
Y+P
Sbjct: 212 YVPL 215
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 75 VHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI 134
V+S R + + PVIRVFG G+K C VHGV+PY+Y+P + L ++A +I
Sbjct: 173 VYSVFRCCPLPRAPVIRVFGTTPRGQKACCHVHGVYPYIYVPLIGRKPGPSDLLRMATAI 232
Query: 135 DKALN 139
D AL+
Sbjct: 233 DGALH 237
>gi|281208977|gb|EFA83152.1| DNA polymerase zeta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 2058
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 150 HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPY 209
HVF+ + + P YGY+ ++ F+KI LY P +++++ +LL NG++ +F YE+HIP+
Sbjct: 30 HVFNARLTRGRPFYGYYPQDKIFIKIFLYNPDNLNRIANLLRNGSIMGVKFDVYEAHIPF 89
Query: 210 ILQFCIDYNLYGMSNIEFNMVKFR 233
+LQ +DYNL GMS I+F + FR
Sbjct: 90 MLQVFLDYNLAGMSFIDFTKILFR 113
>gi|321248956|ref|XP_003191299.1| zeta DNA polymerase [Cryptococcus gattii WM276]
gi|317457766|gb|ADV19512.1| zeta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1991
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITE----TMLQQLAASIDKALN 139
VPVIR+FG +K C VH +PY ++P+ +P+ + Q+ A S++ A+
Sbjct: 70 VPVIRIFGTTSFSQKICANVHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNHAIC 129
Query: 140 IAL-----------GYKDSVQ----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
+AL Y V HV + + K P YGYH FLKI L P +
Sbjct: 130 LALRQNPTSAANNTNYGGGVDPKHLHVVSVILVKGTPFYGYHLGYHYFLKINLANPARLH 189
Query: 185 KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ L V +QP+E+H+ ++LQF D++LYG +E FR
Sbjct: 190 IALEQLQKPNVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELGGGTFR 238
>gi|134108036|ref|XP_777400.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260090|gb|EAL22753.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1973
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITE----TMLQQLAASIDKALN 139
VPVIR+FG +K C +H +PY ++P+ +P+ + Q+ A S++ A+
Sbjct: 70 VPVIRIFGTTSSSQKICANIHLCYPYFFVPYPMDSQDPLRPERVVKLCQRFAVSLNYAIC 129
Query: 140 IAL-----------GYKDSVQ----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
+AL Y V HV + + K P YGYH FLKI L P +
Sbjct: 130 LALRQNPTSAANNTNYGGGVDPKHLHVVSVILVKGTPFYGYHLGFDYFLKINLANPARLH 189
Query: 185 KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+ L V +QP+E+H+ ++LQF D++LYG +E FR
Sbjct: 190 IALEQLRKPNVLGREWQPHEAHLNHVLQFMCDFDLYGCGWLELGGGTFR 238
>gi|401881076|gb|EJT45381.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 1157
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 81 NLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITE----TMLQQLAAS 133
L+ +VPV+RVFG + +K C VH +PY ++PF +P+ + Q+ A S
Sbjct: 24 GLLPGQVPVLRVFGTTPKNQKVCANVHLCYPYFFVPFPMDSPDPLRPERVIRLCQRFAVS 83
Query: 134 IDKAL---------------NIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLY 178
++ A+ N A G HV + + K P YGYH FLK+ L
Sbjct: 84 LNHAICLALRQNPTGPTNAANFAGGTDPKHLHVVSVMLVKGTPFYGYHLGYSYFLKVSLA 143
Query: 179 EPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
P + + L V +QP+E+H+ ++LQF D +LYG ++ + FR
Sbjct: 144 NPSRVRVAVEQLHKPVVLGREWQPHEAHLSHVLQFMCDLDLYGCGFLDLSGGTFR 198
>gi|147899700|ref|NP_001087694.1| DNA-directed DNA polymerase delta 1 [Xenopus laevis]
gi|51895814|gb|AAH81093.1| Pold protein [Xenopus laevis]
Length = 1109
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP+IR+FG EG C +HG PY Y+P H Q+ + K LN A+
Sbjct: 116 VPIIRMFGITEEGNSVCCHIHGFAPYFYVPCH-----TGFKQEDLSDFKKELNTAVIKDM 170
Query: 143 -GYKDSV-QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
KD + Q V + +C K MYGYH F+KI + P ++ + LL G F
Sbjct: 171 RSNKDGISQAVLAVDVCHKENMYGYHGKRIMPFMKITMALPRLIAPAKRLLEQGLRFGRH 230
Query: 200 ----FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLP------KLSHCQ 247
+Q YE++I + ++F +D ++ G + IE K+ R +S+ P K+S Q
Sbjct: 231 PIHCYQAYEANIDFEIRFMVDNDIVGCNWIELPAGKYRVRKESQDEEPSKDNPSKVSLAQ 290
Query: 248 LEADVKAESIV 258
+E D+ ++
Sbjct: 291 IEVDISWADLI 301
>gi|327276010|ref|XP_003222764.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Anolis
carolinensis]
Length = 1100
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 22/184 (11%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R+FG G C +HG PY Y+P F + + E ++L A++ + +
Sbjct: 107 VPVLRMFGVTEAGNSLCCHIHGFAPYFYVPAQTGFKADHLAE-FQRELNAAVLRDMR--- 162
Query: 143 GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSK----LEDLLLNGAVF 196
KD++ Q V + IC K MYGYH + FLKI + P ++ LE L G +
Sbjct: 163 SNKDNLSQVVLAVEICNKQNMYGYHGENFIPFLKITMAMPRLIAPAKRLLEQGLRCGTLG 222
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL--------PKLSHCQL 248
+Q +E++I + ++F +D ++ G + IE K+R E S PK+S CQL
Sbjct: 223 VHNYQAFEANIDFEIRFMVDRDVVGCNWIELPAGKYRLRQEQSAGESSKENPPKVSLCQL 282
Query: 249 EADV 252
EADV
Sbjct: 283 EADV 286
>gi|410982338|ref|XP_003997514.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 3 [Felis
catus]
Length = 1124
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E + + + ++L A+I + +
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGREHLGD-LQRELNAAISR--DQRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 179 GKELAGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
F PYE+++ + ++F +D ++ G + +E K+ E K +HCQLEADV+ +
Sbjct: 239 PSFAPYETNVDFEIRFMVDTDIVGCNWLELPAGKYLLRLEG---KATHCQLEADVQWSDV 295
Query: 258 V 258
V
Sbjct: 296 V 296
>gi|410982334|ref|XP_003997512.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Felis
catus]
Length = 1111
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E + + + ++L A+I + +
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGREHLGD-LQRELNAAISR--DQRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 179 GKELAGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
F PYE+++ + ++F +D ++ G + +E K+ E K +HCQLEADV+ +
Sbjct: 239 PSFAPYETNVDFEIRFMVDTDIVGCNWLELPAGKYLLRLEG---KATHCQLEADVQWSDV 295
Query: 258 V 258
V
Sbjct: 296 V 296
>gi|410982336|ref|XP_003997513.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Felis
catus]
Length = 1109
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E + + + ++L A+I + +
Sbjct: 120 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGREHLGD-LQRELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 177 GKELAGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
F PYE+++ + ++F +D ++ G + +E K+ E K +HCQLEADV+ +
Sbjct: 237 PSFAPYETNVDFEIRFMVDTDIVGCNWLELPAGKYLLRLEG---KATHCQLEADVQWSDV 293
Query: 258 V 258
V
Sbjct: 294 V 294
>gi|320581055|gb|EFW95277.1| Catalytic subunit of DNA polymerase zeta [Ogataea parapolymorpha
DL-1]
Length = 1564
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 56/229 (24%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI----PFHHEPITETMLQQLAASIDKAL 138
V +VPVIRV+G G + +H VFPYLY+ P E + L ID +
Sbjct: 52 VFNQVPVIRVYGKLTTGHTCLLHIHNVFPYLYVQYRGPTSDEKKIDEHLLSWKNEIDMQI 111
Query: 139 NIALGYKDSVQ--------------------------------------HVFHISICKKF 160
+ ++ + +V IS+ +
Sbjct: 112 YQSFRFRHRKKRKPATKEDETVDLEGVDDVNDDDDELDEEDVDIGAGNTYVADISLVRGN 171
Query: 161 PMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLY 220
YGYH F+KI L P ++ +LE LL G +F + QP+E+HIPY+LQF DYN +
Sbjct: 172 SFYGYHFGFSPFIKISLLSPRYVKRLERLLGEGKLFGKVVQPFEAHIPYMLQFLTDYNCF 231
Query: 221 GMSNIEFNMVKFRS---------DS-----ETSLPKLSHCQLEADVKAE 255
G + I +RS D+ ET +L+ ++ ++VK E
Sbjct: 232 GCNWIYLEKAFWRSPLVQTQGHLDAFQEYFETDFAQLNQVKVTSEVKRE 280
>gi|290981126|ref|XP_002673282.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
gi|284086864|gb|EFC40538.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
Length = 1980
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 40 VFGNNIEGK-KTCVFVHGVFPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFG--NN 96
V+G E K K C+ VH ++PY + F HE + + + N
Sbjct: 3 VYGTVQETKQKACLHVHQLYPYFMLSFPHELFSSNSNQNNSNINSSNNDDSDDLTSIYQN 62
Query: 97 VEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISI 156
++ KK F+ + + FH T+ Q + + Q V I +
Sbjct: 63 MDMKKVNQFISVLGASIEDTFHQSLFGHTLNQYERTLKNNPQQQPSFHIHPRQFVHDIVL 122
Query: 157 CKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCID 216
P YGY + + FLK+ +Y P H+ K+ + NG V RF YE+HIP+ LQF +D
Sbjct: 123 VSGKPFYGYWFNHKLFLKVYVYNPSHVGKMAAMFGNGTVMGHRFSVYEAHIPFPLQFMMD 182
Query: 217 YNLYGMSNIEFNMVKFR 233
YNLYGM ++ + FR
Sbjct: 183 YNLYGMGDLSVEKLYFR 199
>gi|384484632|gb|EIE76812.1| hypothetical protein RO3G_01516 [Rhizopus delemar RA 99-880]
Length = 966
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%)
Query: 129 QLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
Q +++AL+++ D QH+ I + K P YGYH +TFLKI L P ++ D
Sbjct: 19 QFGTCLNQALDLSKPNSDKNQHIAAIVLVKGTPFYGYHVGHQTFLKIYLTRPSEKQQIID 78
Query: 189 LLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI 225
+L + A+ FQP+E+H+ + LQF IDYNLYGM I
Sbjct: 79 ILQSQAIMGIHFQPFEAHLSFELQFMIDYNLYGMDWI 115
>gi|401401420|ref|XP_003881007.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325115419|emb|CBZ50974.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 3935
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/247 (27%), Positives = 104/247 (42%), Gaps = 25/247 (10%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+++ ++ + P+ DP + I +VPV+R++G E T V + P
Sbjct: 82 VMSVSVTVVEPCLEAPVPGLDPAVAPFSGRRIWRVPVLRIYGVVNENPLTSVAATALSP- 140
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--- 117
P P +E + S + V G+ CV VH VFPY +IP
Sbjct: 141 --APTAGSPPSELHLSSISSSSVSSTSARCPRGDGRFLGRMCCVTVHNVFPYFFIPLPRE 198
Query: 118 -HHEPITETMLQQLAASI---DKALNIALGYKDSVQH------------VFHISICKKFP 161
H P E LQ +A + ++ L G S Q +F + + KK
Sbjct: 199 AHERP--EVWLQWFSAKLRACEEKLTAHRGQATSRQPGQGPSAASGSPLLFALRLVKKRA 256
Query: 162 MYGYHADERTFLKILLYEPYHMS-KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLY 220
YGY R F+KI P + +L LLL G V QP+E HIP++ F D++L
Sbjct: 257 FYGYDHAPRLFVKISTLHPGSKTVQLAALLLQGRVTGSPLQPFEIHIPFVSHFLADFHLR 316
Query: 221 GMSNIEF 227
GM + F
Sbjct: 317 GMDLLTF 323
>gi|296477407|tpg|DAA19522.1| TPA: DNA polymerase delta catalytic subunit [Bos taurus]
Length = 987
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L+A+I + +
Sbjct: 121 VPILRAFGVTNEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSE-LQRELSAAISR--DQRG 177
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P M+ LL G +
Sbjct: 178 GKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGT 237
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ R + + +L CQLEADV
Sbjct: 238 PSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYILRPEGKATL-----CQLEADV 289
>gi|27806073|ref|NP_776852.1| DNA polymerase delta catalytic subunit [Bos taurus]
gi|118838|sp|P28339.1|DPOD1_BOVIN RecName: Full=DNA polymerase delta catalytic subunit
gi|162974|gb|AAA30493.1| DNA polymerase-delta catalytic-subunit [Bos taurus]
Length = 1106
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L+A+I + +
Sbjct: 121 VPILRAFGVTNEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSE-LQRELSAAISR--DQRG 177
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P M+ LL G +
Sbjct: 178 GKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGT 237
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ R + + +L CQLEADV
Sbjct: 238 PSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYILRPEGKATL-----CQLEADV 289
>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
Length = 1097
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIAL 142
I VP++R++G +EG C VHG PY ++ E T+ +++KA L+
Sbjct: 108 IGPVPIMRMYGVTMEGNSVCCHVHGFSPYFFVQV-PENFTDNHCLPFKTALNKAILDDMR 166
Query: 143 GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-- 198
KD V + V + + KK +YGY ++ FLK+ + P ++ + LL V+
Sbjct: 167 SNKDGVTEAVLAVELQKKENIYGYRGGQKVPFLKVTVALPRLIAPAKRLLEKEVVYAALG 226
Query: 199 --RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKA 254
+Q +ES++ + ++F +D N+ G S +E K+ RS + +S+P S CQ+E DV
Sbjct: 227 TYNYQAFESNVDFDIRFMVDTNVVGCSWVELPPGKWRMRSKNNSSVPLTSRCQIEVDVSW 286
Query: 255 ESIV 258
E +
Sbjct: 287 EDFI 290
>gi|149056043|gb|EDM07474.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Rattus norvegicus]
Length = 808
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L A+I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSE-LQRELNAAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 286
>gi|149056046|gb|EDM07477.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
gi|149056047|gb|EDM07478.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
Length = 964
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L A+I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSE-LQRELNAAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 286
>gi|324120694|dbj|BAJ78738.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1097
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL- 142
I VP++R++G +EG C VHG PYL++ + ET ALN A+
Sbjct: 108 IGPVPIMRMYGVTMEGNSVCCHVHGFSPYLFV-----QVPETFTDGHCLPFKNALNKAIL 162
Query: 143 -----GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF 196
+ + V + + K +YGY ++ FLKI + P ++ LL V+
Sbjct: 163 DDMRSNREGLTEAVLAVELQMKENIYGYRGGKKMPFLKITVALPRLIAPARRLLEKEVVY 222
Query: 197 ----NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEA 250
+Q +ES+I + ++F +D N+ G S +E K+ RS ++SLP +S CQ+E
Sbjct: 223 PALGTYNYQAFESNIDFDIRFMVDTNVVGCSWVELPPKKWRMRSKGDSSLPMMSRCQIEV 282
Query: 251 DVKAESIV 258
DV E +
Sbjct: 283 DVSWEDFI 290
>gi|149056044|gb|EDM07475.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Rattus norvegicus]
Length = 1099
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L A+I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSE-LQRELNAAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 286
>gi|149056045|gb|EDM07476.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_c [Rattus norvegicus]
gi|149056048|gb|EDM07479.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_c [Rattus norvegicus]
Length = 1103
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L A+I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSE-LQRELNAAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 286
>gi|11067381|ref|NP_067694.1| DNA polymerase delta catalytic subunit [Rattus norvegicus]
gi|3913500|sp|O54747.1|DPOD1_RAT RecName: Full=DNA polymerase delta catalytic subunit
gi|2687728|emb|CAA10946.1| DNA polymerase delta, catalytic subunit [Rattus norvegicus]
Length = 1103
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L A+I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSE-LQRELNAAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 286
>gi|148690783|gb|EDL22730.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Mus musculus]
Length = 817
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|148690787|gb|EDL22734.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_f [Mus musculus]
Length = 964
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|403171115|ref|XP_003330341.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169039|gb|EFP85922.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1055
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP +R+FG G V + PY ++P + T ++L +++ AL++
Sbjct: 89 VPRLRIFGVTEAGHSVLVHIQDFLPYFWVP-APKGFQNTDCRELLTTLNSALSLG----- 142
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQP-- 202
V+ V +S+ K ++GY D ++ FLKI+L + H+ ++++ G V F E F
Sbjct: 143 -VKPVHSLSVAYKTSLWGYTGDTQSPFLKIVLTDFKHLGRVKNAFERGEVNFREMFTACT 201
Query: 203 -YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ES+I Y L+F ID + GM+ +E +R +E L K S+CQ+E + AE+++
Sbjct: 202 TFESNIAYTLRFMIDKKVTGMNWLEVPPGSYRLRTE--LEKASNCQIELETSAETLI 256
>gi|224002805|ref|XP_002291074.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220972850|gb|EED91181.1| DNA polymerase, partial [Thalassiosira pseudonana CCMP1335]
Length = 999
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 24/184 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VPVIR++G N G VF+HG PY Y + + +L + K L + G
Sbjct: 3 VPVIRLYGVNETGNSVAVFIHGFTPYGYF-----ALPRGLRAKLGSQFGKGLQVNGGNGQ 57
Query: 147 SVQHVFHISICK-KFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF--------- 196
Q + K + + GY FLK+ L P + KL+ ++ G V
Sbjct: 58 QPQACLGVQFLKDRQSIMGYDPSHTKFLKVYLGMPGMIPKLKSIMEEGLVLPGIVRVDAN 117
Query: 197 ------NER--FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
NE FQPYE ++P++L++ ID ++ G S + +R +T K +HCQ+
Sbjct: 118 GNSVGVNESMIFQPYECNVPFVLRYMIDRDITGASWLSLPKGTYRL-RQTENEKGTHCQI 176
Query: 249 EADV 252
EAD+
Sbjct: 177 EADI 180
>gi|148690785|gb|EDL22732.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Mus musculus]
Length = 1101
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|148690786|gb|EDL22733.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_e [Mus musculus]
Length = 1105
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|26353290|dbj|BAC40275.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|438134|emb|CAA79895.1| DNA-directed DNA polymerase [Mus musculus]
Length = 1105
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|254587977|ref|NP_035261.3| DNA polymerase delta catalytic subunit [Mus musculus]
gi|341940458|sp|P52431.2|DPOD1_MOUSE RecName: Full=DNA polymerase delta catalytic subunit
gi|74139374|dbj|BAE40829.1| unnamed protein product [Mus musculus]
gi|74195649|dbj|BAE39632.1| unnamed protein product [Mus musculus]
gi|74223279|dbj|BAE40772.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|148690782|gb|EDL22729.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Mus musculus]
Length = 1127
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 142 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 198
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 199 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 258
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 259 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 310
>gi|14318657|gb|AAH09128.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus
musculus]
gi|30962877|gb|AAH52670.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus
musculus]
Length = 1105
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|2827903|gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus musculus]
Length = 1105
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C + G PY Y P F E ++E + Q+L A+I + +
Sbjct: 120 VPILRAFGVTDEGFSVCCHIQGFAPYFYTPAPPGFGAEHLSE-LQQELNAAISR--DQRG 176
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P M+ LL G +
Sbjct: 177 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGT 236
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 237 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVRRAEK---KATLCQLEVDV 288
>gi|432868483|ref|XP_004071560.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryzias
latipes]
Length = 1107
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNI 140
+KVP+IR+FG G C VHG PY Y+P F E + E ++L +++ K +
Sbjct: 113 EKVPIIRMFGVTDNGNSVCCHVHGFAPYFYVPAPNGFKSEFLGE-FKRELNSAVLKDMR- 170
Query: 141 ALGYKDSVQ-HVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFN- 197
KD++ V + I +K MYGYH + FL+I + P ++ + LL G F
Sbjct: 171 --SNKDNISVTVLAVDITRKENMYGYHGQQSMDFLRITMAMPRLIAPAKRLLEQGFKFGH 228
Query: 198 ---ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP----------KLS 244
+ +Q +E++I + ++F +D N+ G IE K+R E S K+S
Sbjct: 229 FPIQGYQSFEANIDFEIRFMVDSNVVGCCWIELPKDKWRLREERSTSTGEVDSQTPVKVS 288
Query: 245 HCQLEADVKAESIV 258
CQ E DV ++
Sbjct: 289 LCQYEVDVAWTDLI 302
>gi|403359875|gb|EJY79597.1| DNA polymerase [Oxytricha trifallax]
Length = 1978
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 27/168 (16%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-----HHEPITETMLQ----QLAASI 134
I+KVPV+R+FG G+K C+ + +P+LY F + E T LQ A ++
Sbjct: 40 IKKVPVLRLFGITKRGQKACLNIFDYYPFLYCEFPVQIFNIERSTSEELQVFLSDFAFNL 99
Query: 135 DKALNIALGYKDSV---------------QHVFHISICKKFPMYGYHADERTFLKILLYE 179
+ AL +++ K + Q V + + K+P+YGY+ +++ F+KI LY
Sbjct: 100 EFALYLSIYQKSGLKSPRILLREFEDKNEQLVHNCELAYKYPIYGYYTEKKPFIKIELYH 159
Query: 180 PYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEF 227
H+ K ++L +G ++ QPYE+H+ Y + F Y YG+S ++F
Sbjct: 160 SIHVKKCANMLYSGILYGIAMQPYEAHLSYHMHF---YGDYGISGLDF 204
>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
T30-4]
gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
T30-4]
Length = 1609
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY 144
Q +IR++G +EG + VHGV PY Y + E+ ++ A++D A++
Sbjct: 62 QNAAIIRLYGVTMEGHSVLMHVHGVLPYFYA-VCPDNFDESKCGEVRAALDAAVSQRDRD 120
Query: 145 KDSVQHVFHISICK-KFPMYGYHADERTFL-KILLYEPYHMSKLEDLLLNGAVFN----E 198
S V + + + K +YGY D RT L KI L P ++ KL L G
Sbjct: 121 SSSNARVVGVQVVRDKMSIYGYQFDRRTTLFKIFLSMPSYVPKLRSALEGGLTLPGCDFR 180
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+Q YES++P+IL+F ID + G + +E + S K S CQLE D+ +++V
Sbjct: 181 NYQTYESNVPFILRFMIDEEIRGCNWVEAPTGTYSVRSAAQ--KKSLCQLEIDITYDNLV 238
>gi|301764899|ref|XP_002917866.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1106
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E + + + ++L A+I + +
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGSEHLGD-LQRELNAAISR--DQRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P M+ LL G +
Sbjct: 179 GKELTGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ R + + +L CQLEADV
Sbjct: 239 PSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYVLRQERKATL-----CQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|50294045|ref|XP_449434.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528748|emb|CAG62410.1| unnamed protein product [Candida glabrata]
Length = 1481
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-HEPITETMLQQLAASIDKALNIAL-- 142
KVPVIR+FG G + VHG+FPY ++ + E T ++ + A + + L L
Sbjct: 54 KVPVIRIFGCLRTGHQLLCHVHGIFPYFFVKYDGKEDDTSIIINEKCAKLHQLLEQILRD 113
Query: 143 -----GYKDSVQ---------HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
G ++ Q ++ ++S+ K P YGYH F KI L P ++ +
Sbjct: 114 KMKSKGSRNDKQDETNLNELVYIANVSVVKGVPFYGYHVGWTPFYKISLLNPSLSEQVCN 173
Query: 189 LLLNGAVF-NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
++ V N + + YES PY+L+F D+NL+ S I F V FR+
Sbjct: 174 IIREQNVLQNGQNEVYESQFPYLLKFTADFNLFACSWINFKKVYFRA 220
>gi|71652700|ref|XP_815001.1| DNA polymerase zeta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70880023|gb|EAN93150.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1885
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 95 NNVEGKKTCVFVHGVFPYLYIPFHHEPITETML-QQLAASIDKALNIALGYKDSV--QHV 151
++++ + C +HGV+PY + H ++ QL A + L + + Q +
Sbjct: 137 DSIQQRSVCAHIHGVYPYFMVLRHDSRVSVMQFGAQLEAVALRVLRPSSSSTSAPPRQLL 196
Query: 152 FHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYI 210
H+ + ++ P YGYH R+F ++ + +P + +L LL + V R+Q YESH PY
Sbjct: 197 HHVELVRRLPFYGYHERFRSFFRVSVIDPAMVGRLVRLLGHTTEVGGRRWQTYESHAPYH 256
Query: 211 LQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADVKAESI 257
QF +DY + GM+ RS +PK L H Q +A +K ++
Sbjct: 257 FQFMVDYGMKGMAPFFIPTCTARS----PIPKELQHVQAQARLKITAV 300
>gi|354497678|ref|XP_003510946.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cricetulus
griseus]
Length = 1070
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E +++ + ++L+ +I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSD-LQRELSTAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P ++ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVWRTEK---KATQCQLEVDV 286
>gi|324120734|dbj|BAJ78758.1| DNA polymerase delta catalytic subunit [Gynaikothrips ficorum]
Length = 1091
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI---PFHHEPITETMLQQLAASIDKALNIALG 143
VPV+R+FG G C VHG PY ++ P P + L+ +I + G
Sbjct: 105 VPVMRLFGVTSSGNSVCCHVHGFTPYFFVSAPPNFTNPNCHDFQKALSKAIMADMK---G 161
Query: 144 YKDSV-QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF----N 197
KD+V + V + I +K +YGYH D+ +LKI L P ++ + LL G V+
Sbjct: 162 NKDNVTEPVLAVEIVRKQNLYGYHGDDMHNYLKITLALPRLIAPAKRLLERGGVYPADGG 221
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADVKAES 256
+ +E +I + ++F +D ++ G S +E + SLP +S CQLE DV +
Sbjct: 222 HAYTAFECNIDFDIRFMVDTHMVGCSWVELPAGSWTIRQPHGSLPIVSRCQLEVDVAYDK 281
Query: 257 IV 258
++
Sbjct: 282 LI 283
>gi|1840091|gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus]
Length = 1102
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E +++ + ++L+ +I + +
Sbjct: 117 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSD-LQRELSTAISR--DQRG 173
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P ++ LL G +
Sbjct: 174 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGT 233
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 234 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVWRTEK---KATQCQLEVDV 285
>gi|430812887|emb|CCJ29720.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1088
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P IR++G + V G FPY Y+P H +E + +++ +N ++
Sbjct: 117 PTIRLYGVTEQENSVLCIVTGFFPYFYVPSPHS-FSEEHISSFKIALENTINSGNRVVNN 175
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQP--- 202
++ V SI YG+ DE++ F+KI++ +P +++++ G + F+ F P
Sbjct: 176 IELVTRQSI------YGFQGDEKSLFIKIIVNDPKYIARIRSSFERGDINFDNMFPPQYI 229
Query: 203 -YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
+ES+IPY+L+F ID ++ GM I K+ +E K S+CQLE + E++
Sbjct: 230 TFESNIPYVLRFMIDASITGMCWIRLPKTKYSIINE----KTSNCQLEVSISWENL 281
>gi|3122029|sp|P97283.1|DPOD1_MESAU RecName: Full=DNA polymerase delta catalytic subunit
gi|1840089|gb|AAB47254.1| DNA polymerase delta catalytic subunit [Mesocricetus auratus]
Length = 1103
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E +++ + ++L+ +I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSD-LQRELSTAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P ++ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVWRTEK---KATQCQLEVDV 286
>gi|344257341|gb|EGW13445.1| DNA polymerase delta catalytic subunit [Cricetulus griseus]
Length = 1056
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E +++ + ++L+ +I + +
Sbjct: 118 VPILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSD-LQRELSTAISR--DQRG 174
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + S V I +C + M+GYH FL+I L P ++ LL G +
Sbjct: 175 GKELSGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGT 234
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ +E K + CQLE DV
Sbjct: 235 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVWRTEK---KATQCQLEVDV 286
>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
Length = 999
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIA 141
I VPV+R++G + G C +HG PY Y+ E + Q S+++A+ ++
Sbjct: 13 IGPVPVMRMYGVTMTGLSVCCHIHGFSPYFYVT-APERFSNKDCQPFKTSLNRAVLADLR 71
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE--- 198
++ + + + I K ++GY +R F+KI + P ++ + LL +++
Sbjct: 72 SNREEIKEAILMVEIVHKKSLFGYSDKDRLFIKITVALPRLIAPSKRLLEKENIYDACGP 131
Query: 199 -RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAE 255
+Q +ES+I + ++F +D N+ G + +E K RS +LP S CQ+EAD+ E
Sbjct: 132 HSYQSFESNIDFDIRFMVDTNVLGCTWVELPPKKWKIRSKENPNLPITSRCQIEADICYE 191
Query: 256 SIV 258
+
Sbjct: 192 DFI 194
>gi|335290039|ref|XP_003127412.2| PREDICTED: DNA polymerase delta catalytic subunit [Sus scrofa]
Length = 1107
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG +G C +HG PY Y P F E +++ + ++L A+I + +
Sbjct: 122 VPVLRAFGVTDDGVSVCCHIHGFAPYFYTPAPPGFGPEHLSD-LQRELNAAISR--DQRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P M+ LL G +
Sbjct: 179 GKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ R + + +L CQLEADV
Sbjct: 239 PSFAPYEANVDFEIRFMVDADVVGCNWLELPAGKYLLRPEGKATL-----CQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|224123188|ref|XP_002319016.1| predicted protein [Populus trichocarpa]
gi|222857392|gb|EEE94939.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 47/178 (26%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV+ID +MS PI D +S + + +VPVIRV+G+ G+KTC+ VH FPY
Sbjct: 11 IFSLRIVSIDHYMSPPIPGVDICYSSFQGGKVNEVPVIRVYGSTPAGQKTCLHVHRAFPY 70
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+P PI N EG ++ +F L I
Sbjct: 71 LYVPCLDIPIN-----------------------GNREGM---IYDRNIFSSLCI----- 99
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLY 178
+N+ QHV S+ + YGYH+DE F+KI LY
Sbjct: 100 ----------------TINLKGNVGSKRQHVHGCSLVRAKKFYGYHSDEELFVKIYLY 141
>gi|344269498|ref|XP_003406589.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Loxodonta
africana]
Length = 989
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VPV+R FG G C +HG PY Y P P + +LAA +D A G +
Sbjct: 123 VPVLRAFGVTDAGFSVCCHIHGFVPYFYTP--AVPGSGPSTWRLAAELDAASAGQRGGRS 180
Query: 147 SVQ-HVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFNERF 200
S + V C M+GYH FL+I L P ++ LL G + F
Sbjct: 181 SPELTVLAWESC----MFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVSGLGTPSF 236
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAESIV 258
+PYE+++ + ++F +D ++ G + +E K+ R + +T+L CQLEADV +V
Sbjct: 237 KPYEANVDFEIRFMVDMDIVGCNWLELPAGKYVLRPEGKTTL-----CQLEADVLWSDVV 291
>gi|410902099|ref|XP_003964532.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Takifugu
rubripes]
Length = 1104
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGY 144
K P++R+FG G C +HG PY Y+P + T L + ++ A L
Sbjct: 114 KAPIVRMFGVTDNGNSVCCHIHGFAPYFYVPAPN-GFTSAHLGEFQKELNSAVLKDMRSN 172
Query: 145 KDSVQ-HVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFN----E 198
KD++ V + I +K MYGYH FL+I + P ++ + LL G F
Sbjct: 173 KDNISVTVLAVDIARKENMYGYHGKRILDFLRITMAMPRLIAPAKRLLEQGLKFGPFPLH 232
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS--------LPKLSHCQLEA 250
+Q +E++I + ++F +D N+ G IE K+R E L K+S CQ E
Sbjct: 233 YYQAFEANIDFEIRFMVDTNVVGCCWIELPKGKYRVREENDLLVTDSQCLGKVSFCQYEV 292
Query: 251 DVKAESIVVDMAAND 265
D+ + A D
Sbjct: 293 DIGWTDFISHPAEGD 307
>gi|324120746|dbj|BAJ78764.1| DNA polymerase delta catalytic subunit [Neocolochelyna itoi]
Length = 1003
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI------------PFHHEPITETMLQQLAASI 134
VP++R++G +EG C VHG PYL++ PF E + + +L + ++
Sbjct: 16 VPIMRMYGVTMEGNSVCCHVHGFCPYLFVTAPENFNNSHCKPF-REALNKAVLADMRSNN 74
Query: 135 DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG 193
DK + + + I +K MYGY ++ FLKI + P ++ + LL
Sbjct: 75 DKV----------PEAILVVEIVQKQSMYGYAGEDLVPFLKITVALPKLIAPCKRLLEKE 124
Query: 194 AVF----NERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQ 247
VF N +Q YES+I + ++F +D ++ G S I+ K R LP S CQ
Sbjct: 125 TVFPTFGNHIYQAYESNIDFDIRFMVDTSVVGCSWIKLPPGQWKLRGQLGNKLPLTSRCQ 184
Query: 248 LEADVKAESIVV 259
LE D+ ++ +
Sbjct: 185 LEVDIAWDAFIA 196
>gi|324120690|dbj|BAJ78736.1| DNA polymerase delta catalytic subunit [Nipponatelura sp. 66-1]
Length = 1006
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP++R++G +EG C VHG PYL++ + +T ++ KALN AL
Sbjct: 16 VPIMRMYGITMEGHSVCCHVHGFTPYLFV-----TVPDTFQEKHCEPFKKALNKALLDDM 70
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE- 198
G + + + K +YGY ++ FLKI + ++ + LL +F E
Sbjct: 71 RYGKDKPSEAALAVELQLKENIYGYRGGKKVPFLKITVALHRFVAASKRLLEREVIFPEL 130
Query: 199 ---RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVK 253
+Q +ES+I + ++F +D + G S +E K RS + +LP S CQ+EADV
Sbjct: 131 GAYNYQAFESNIDFDIRFMVDTGVVGCSWVELLPGKWKIRSRNNPTLPLESRCQIEADVS 190
Query: 254 AESIV 258
V
Sbjct: 191 WHEFV 195
>gi|324120714|dbj|BAJ78748.1| DNA polymerase delta catalytic subunit [Euconocephalus varius]
Length = 1035
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALG 143
I VPV+R+FG EG C VHG PY+++ E T+ Q +++ A+ +A G
Sbjct: 52 IGPVPVMRMFGITAEGNSVCCHVHGFSPYMFVT-APEGFTDKHCAQFRTALNSAM-LADG 109
Query: 144 Y--KDSVQ-HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN-- 197
+ +D VQ V + I K ++GY D+ F+KI L P H+ + + G F
Sbjct: 110 FVSRDRVQVAVLAVEIVHKQNLFGYRGDQDAPFIKITLAVPRHVGSVRRIFEKGISFAGL 169
Query: 198 --ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+Q +E++I + ++F +D + G S IE K+ ++ S CQ+E DV
Sbjct: 170 PPHTYQFFETNIDFDIRFMVDTGVVGCSWIELPAGKWSMRAKDRFQ--SRCQIEVDV 224
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 7 VTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+ ID + +PI I VPV+R+FG EG C VHG PY+++
Sbjct: 34 IDIDHYSGQPIPGMPGSQ-------IGPVPVMRMFGITAEGNSVCCHVHGFSPYMFV 83
>gi|426244098|ref|XP_004015869.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Ovis aries]
Length = 1198
Score = 78.2 bits (191), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E ++E + ++L+A+I + +
Sbjct: 131 VPILRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSE-LQRELSAAISR--DQRG 187
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH + FL+I L P M+ LL G +
Sbjct: 188 GKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGT 247
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADV 252
F PYE+++ + ++F +D ++ G + +E K+ R + + +L CQLEADV
Sbjct: 248 PSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYILRPEGKATL-----CQLEADV 299
>gi|348559458|ref|XP_003465533.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cavia
porcellus]
Length = 1105
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIA 141
+VPV+R FG EG C +HG PY Y+P F E + + + ++L+A+I + +
Sbjct: 119 QVPVLRAFGVTDEGVSVCCHIHGFAPYFYVPAPPGFGAEHLAD-LQRELSAAISR--DQR 175
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVF 196
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 176 GGKELAGPAVLAMELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLG 235
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKA 254
F PYE+++ + ++F +D ++ G + +E K+ R + +L CQLE DV
Sbjct: 236 TPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYVLRQKEKATL-----CQLEVDVLW 290
Query: 255 ESIV 258
+V
Sbjct: 291 SDVV 294
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 34 KVPVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
+VPV+R FG EG C +HG PY Y+P
Sbjct: 119 QVPVLRAFGVTDEGVSVCCHIHGFAPYFYVP 149
>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
Length = 1050
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY 144
Q +IR++G ++EG + VHGV PY Y + E+ ++ A++D A++
Sbjct: 62 QNAAIIRLYGVSMEGHSVLMHVHGVLPYFYC-VCPDNFDESRCGEVRAALDAAVSQRDRD 120
Query: 145 KDSVQHVFHISICK-KFPMYGYHADERTFL-KILLYEPYHMSKLEDLLLNGAVFN----E 198
S V + + + K +YGY D T L KI L P ++ KL L G
Sbjct: 121 SSSAARVVGVQVVRDKMSIYGYQFDRYTTLFKIYLSMPSYVPKLRSALEGGLTLPGCDFR 180
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+Q YES++P+IL+F ID + G + +E + S K S CQLE D+ +++V
Sbjct: 181 NYQTYESNVPFILRFMIDEGIRGCNWVEAPKGAYSVRSTAQ--KKSLCQLEIDITYDNLV 238
>gi|149757884|ref|XP_001493912.1| PREDICTED: DNA polymerase delta catalytic subunit [Equus caballus]
Length = 1107
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E +++ + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSD---------LQRELNVAI 172
Query: 143 ------GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG-- 193
G + + V + +C + M+GY FL+I L P M+ LL G
Sbjct: 173 SRDQRGGKELAGPAVLAVELCSRESMFGYQGHGPSPFLRITLALPRLMAPARRLLEQGIR 232
Query: 194 --AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLE 249
+ F PYE+++ + ++F +D ++ G + +E K+ R +T+L CQLE
Sbjct: 233 VAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYVLRPKGKTTL-----CQLE 287
Query: 250 ADV 252
ADV
Sbjct: 288 ADV 290
>gi|291190618|ref|NP_001167152.1| DNA polymerase delta catalytic subunit [Salmo salar]
gi|223648376|gb|ACN10946.1| DNA polymerase delta catalytic subunit [Salmo salar]
Length = 1105
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP+IR+FG G C VHG PY YIP + T L + ++ A L K
Sbjct: 115 VPIIRMFGVTDSGNSVCCHVHGFAPYFYIPAPN-GFTSDHLSEFKRELNSAVLKDMRSNK 173
Query: 146 DSVQ-HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN----ER 199
D++ V + I +K MYGYH FL+I + P ++ + LL G F +
Sbjct: 174 DNMSVTVLAVDITRKETMYGYHGKRIVDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQS 233
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL--------PKLSHCQLEAD 251
F YE++I + ++F +D ++ G IE K+R +E + K+S CQ E D
Sbjct: 234 FSSYEANIDFEIRFMVDSDVVGCCWIELPKGKYRVRAERKVGETDAHYPGKVSLCQYEVD 293
Query: 252 VKAESIV 258
V ++
Sbjct: 294 VGWTQLI 300
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 7 VTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
+ +D+++ +A P S+ VP+IR+FG G C VHG PY YIP
Sbjct: 94 IDLDYYLGAAVAGM-PGQSQ------GNVPIIRMFGVTDSGNSVCCHVHGFAPYFYIP 144
>gi|431920730|gb|ELK18503.1| DNA polymerase delta catalytic subunit [Pteropus alecto]
Length = 1109
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E ++ + Q+L +I + +
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLS-GLQQELNTAISR--DHRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 179 GKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGVRVVGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ R + +T+L CQLE DV
Sbjct: 239 PSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVLRPEGKTTL-----CQLEVDVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|73946992|ref|XP_851285.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 1107
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VP++R FG EG C +HG PY Y P F E + + + ++L A+I + +
Sbjct: 122 VPILRAFGVTDEGVSVCCHIHGFAPYFYTPAPSGFGSEHLGD-LQRELNAAISR--DQRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 179 GKELTGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ R + +L CQLEADV
Sbjct: 239 PSFAPYEANVDFEIRFMVDTDIVGCNWLELPAEKYILRPQGKATL-----CQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|407867747|gb|EKG08654.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1793
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 95 NNVEGKKTCVFVHGVFPYLYIPFHHEPITETML-QQLAASIDKALNIALGYKDSV--QHV 151
N+++ + C +HGV+PY + H ++ QL A + L + + Q +
Sbjct: 45 NSIQQRSVCAHIHGVYPYFMVLRHDSRVSVMQFGAQLEAVALRVLRPSSSSTSAPPRQLL 104
Query: 152 FHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYI 210
H+ + ++ P YGYH R+F ++ + +P + +L LL + V R+Q YESH PY
Sbjct: 105 HHVELVRRLPFYGYHERFRSFFRVSVIDPAMVGRLVRLLGHTTEVGGRRWQTYESHAPYH 164
Query: 211 LQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKAESI 257
QF +DY + GM+ F P +L H Q +A +K ++
Sbjct: 165 FQFMVDYGMKGMAPF------FIPTCTARFPIAKELQHMQAQARLKITAV 208
>gi|281210761|gb|EFA84927.1| DNA polymerase delta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1999
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP++R+FG G VHG PY +I + T+ ++K + +
Sbjct: 634 VPIVRLFGATRNGNSVLCKVHGFLPYFFISCPNG-FTQADCSLFLKLLNKKMLESTTNNH 692
Query: 147 SVQHVFHISICKKFPMYGYH-ADERTFLKILLYEPYHMSKLEDLLLNG-----AVFNER- 199
+ Q V I I KK + GY+ A +++I L P ++ K D+L NG A+ N+
Sbjct: 693 TDQIVLAIDIEKKKSILGYNPAPPTDYIRITLAMPRYVPKCRDVLENGLKYQFALPNQPP 752
Query: 200 --FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
+Q +ES IP+ L+F ID + G S IE +R SETS LS CQ+E D E++
Sbjct: 753 RLYQTFESDIPFALRFLIDKQIPGCSWIELPANSYRK-SETS---LSTCQIEIDTSVETL 808
Query: 258 VV-DMAANDSDVA 269
V +A D+A
Sbjct: 809 TVHQIAPGWDDIA 821
>gi|190340064|gb|AAI63875.1| Polymerase (DNA directed), delta 1, catalytic subunit [Danio rerio]
Length = 1105
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP------------FHHEPITETMLQQLAAS 133
KVP++R+FG G C +HG PY Y+P F E + +L+ + ++
Sbjct: 114 KVPIVRMFGVTDNGNSVCCHIHGFAPYFYVPAPNGFTNAHLADFQRE-LNSVVLKDMRSN 172
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLN 192
D NIA+ V + I KK MY YH ++ FL+I + P ++ + LL
Sbjct: 173 KD---NIAV-------TVLAVDITKKESMYNYHGNKPHDFLRITMAMPRLVAPAKRLLEQ 222
Query: 193 GAVF----NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------SDSETSLP 241
G F + +Q +E++I + ++F +D N+ G IE K++ +++ P
Sbjct: 223 GFKFANFATQSYQAFEANIDFEIRFMVDSNVVGCCWIELPKGKYQLREERREGQTDSKYP 282
Query: 242 -KLSHCQLEADVKAESIV 258
K+S CQ E DV +S++
Sbjct: 283 GKVSLCQYEVDVAWDSLI 300
>gi|89886293|ref|NP_001034899.1| DNA polymerase delta catalytic subunit [Danio rerio]
gi|58615463|gb|AAW80296.1| DNA polymerase delta1 catalytic subunit [Danio rerio]
Length = 1105
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP------------FHHEPITETMLQQLAAS 133
KVP++R+FG G C +HG PY Y+P F E + +L+ + ++
Sbjct: 114 KVPIVRMFGVTDNGNSVCCHIHGFAPYFYVPAPNGFTNAHLAGFQRE-LNSVVLKDMRSN 172
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLN 192
D NIA+ V + I KK MY YH ++ FL+I + P ++ + LL
Sbjct: 173 KD---NIAV-------TVLAVDITKKESMYNYHGNKPHDFLRITMAMPRLVAPAKRLLEQ 222
Query: 193 GAVF----NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------SDSETSLP 241
G F + +Q +E++I + ++F +D N+ G IE K++ +++ P
Sbjct: 223 GFKFANFATQSYQAFEANIDFEIRFMVDSNVVGCCWIELPKGKYQLREERREGQTDSKYP 282
Query: 242 -KLSHCQLEADVKAESIV 258
K+S CQ E DV +S++
Sbjct: 283 GKVSLCQYEVDVAWDSLI 300
>gi|403299517|ref|XP_003940530.1| PREDICTED: DNA polymerase delta catalytic subunit [Saimiri
boliviensis boliviensis]
Length = 1046
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E + E + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLGE---------LQRELNLAI 172
Query: 143 ------GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG-- 193
G + + V + +C + M+GYH FL+I L P ++ LL G
Sbjct: 173 SRDNRGGKELTGPAVLAVELCSRESMFGYHGHGPSLFLRITLALPRLVAPARRLLEQGIR 232
Query: 194 --AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
+ F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEAD
Sbjct: 233 VAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEAD 289
Query: 252 VKAESIV 258
V ++V
Sbjct: 290 VLWSNVV 296
>gi|383855586|ref|XP_003703291.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Megachile
rotundata]
Length = 1091
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 9/181 (4%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP++R++G +G C VHG PY Y H + + ++DKA L
Sbjct: 105 VPIMRMYGITEQGNSVCCHVHGFCPYFYTTAPHN-FNDAHCSRFKDALDKAVLKDMRSNP 163
Query: 146 DSVQ-HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV---FNERF 200
+ VQ V + K MYGY +E++ FLKI + P ++ + LL + F+ +
Sbjct: 164 EKVQIAVLAVERVYKQNMYGYTGNEKSLFLKITVALPRLIAPCKRLLEKETILPDFDHNY 223
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ +ES+I + ++F +D ++ G S IE K R+ +LP ++ CQ+EADV ++ +
Sbjct: 224 RTFESNIDFDIRFMVDTSVVGCSWIELPPKSWKLRNHHGHNLPMITRCQIEADVAWDAFI 283
Query: 259 V 259
Sbjct: 284 A 284
>gi|297793989|ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
gi|297310714|gb|EFH41138.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
Length = 1092
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL + P+IR+FG EG C FVHG PY YI P P + Q+
Sbjct: 107 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISKFHQILEG 166
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
+ N V+ + + K+ MY + +TFLKI + P ++ +L G
Sbjct: 167 RMRESNKNAKVPKFVRRIEMVQ--KRSIMYYQQQESQTFLKITVALPTMVASCRGILDRG 224
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ + FQ YES+I ++L+F +D ++ G + IE K++ ++ T LS+CQLE
Sbjct: 225 LQIDGFGMKSFQTYESNIIFVLRFMVDCDIVGGNWIEVPTGKYKKNART----LSYCQLE 280
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 24 HSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
H EL + P+IR+FG EG C FVHG PY YI
Sbjct: 107 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYI 146
>gi|296804246|ref|XP_002842975.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
gi|238845577|gb|EEQ35239.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
Length = 1625
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 25/120 (20%)
Query: 164 GYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMS 223
G + R F K+ L P HM++L DLL+ GAV QPYESH+ ++ Q+ DYNL+G
Sbjct: 57 GLGSRRRYFFKVYLLNPLHMTRLADLLMQGAVMKRVLQPYESHLQFVPQWMCDYNLHGCD 116
Query: 224 NIEFNMVKFR------SDSE-------------------TSLPKLSHCQLEADVKAESIV 258
I + VKFR SD E T P+ SHC LE D+ + I+
Sbjct: 117 YINCSKVKFRSPVPRYSDLENPDHIWHNESIMPRQIADATEFPRQSHCALEVDIHVQDIL 176
>gi|444728683|gb|ELW69129.1| DNA polymerase delta catalytic subunit [Tupaia chinensis]
Length = 568
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P Q + + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYT-----PAPPGFGPQHLSDLQRELNVAISRDQ 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GY FL+I L P ++ LL G +
Sbjct: 177 RGGKELAGPAVLAVELCARESMFGYQGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVK 253
F PYE+++ + ++F +D ++ G + +E K+ R+ + +L CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYFLRTQGKATL-----CQLEADVL 291
Query: 254 AESIV 258
+V
Sbjct: 292 WSDVV 296
>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
Length = 1092
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIAL 142
I VPV+R+FG +EG C VHG PY YI + E ++L ++D K +
Sbjct: 99 IGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPRQ-FEEHHCEKLQKALDQKVIADIR 157
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-R 199
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + +E
Sbjct: 158 NNKDNVQEAVLMVELVEKLNIHGYNGDQKQRYIKISVTLPRFVAAASRLLKKEVIMSEID 217
Query: 200 FQ---PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
FQ +E++I + ++F +D ++ G + IE M +R + S P S CQ+E DV
Sbjct: 218 FQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWRRRNTHSKPLPESRCQIEVDV 274
>gi|395858290|ref|XP_003801504.1| PREDICTED: DNA polymerase delta catalytic subunit [Otolemur
garnettii]
Length = 1108
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIAL 142
VPV+R FG EG C +HG PY Y P F E +++ + ++L +I + +
Sbjct: 122 VPVLRAFGVTDEGISVCCHIHGFAPYFYTPAPLGFGPEHLSD-LQRELNGAISR--DQRG 178
Query: 143 GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 179 GKELAGPAVVAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVPGLGT 238
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF---RSDSETSLPKLSHCQLEADVKA 254
F PYE+++ + ++F +D ++ G + +E K+ + + T+L CQLEADV
Sbjct: 239 PSFAPYETNVDFEIRFMVDTDIVGCNWLELPAAKYTLRQKEKATTL-----CQLEADVLW 293
Query: 255 ESIV 258
+V
Sbjct: 294 SDVV 297
>gi|345483424|ref|XP_001602680.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1090
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 9/184 (4%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIA 141
+ VPVIR++G +G C VHG PY ++ T+ + +++ A+ +I
Sbjct: 101 VGSVPVIRMYGVTEQGNSVCCHVHGFSPYFFVSAPSN-FTDAHCRPFKTALNNAVKNDIK 159
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN--- 197
++ + + + I K+ +YGY D+++ FLKI + P ++ + LL +++
Sbjct: 160 SNSENIQEFILAVDIVKRQTVYGYTGDKKSLFLKITVALPRLIAPSKRLLETNVIYDVLP 219
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAE 255
+ +ES+I + ++F D ++ G S IE N K R +LP +S CQLE DV +
Sbjct: 220 HTYTAFESNIDFDIRFMADTHMVGCSWIELKPNHWKLRGKYNHNLPLISRCQLEVDVAWD 279
Query: 256 SIVV 259
+
Sbjct: 280 EFIA 283
>gi|402906428|ref|XP_003916004.1| PREDICTED: DNA polymerase delta catalytic subunit [Papio anubis]
Length = 1107
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E + + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFKPEHL-----GDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYTLRLKK---KTTQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|426389767|ref|XP_004065485.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Gorilla gorilla gorilla]
Length = 908
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|62088700|dbj|BAD92797.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
variant [Homo sapiens]
Length = 1011
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 124 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDS 178
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 179 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 238
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 239 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 295
Query: 256 SIV 258
+V
Sbjct: 296 DVV 298
>gi|78191525|gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens]
Length = 1133
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDS 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|181622|gb|AAA35768.1| DNA polymerase delta [Homo sapiens]
Length = 1107
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAINRDS 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|181620|gb|AAA58439.1| DNA polymerase-delta catalytic-subunit [Homo sapiens]
Length = 1107
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDS 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|14250670|gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo
sapiens]
gi|123998555|gb|ABM86879.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
gi|157929094|gb|ABW03832.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
Length = 1107
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDS 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|156616275|ref|NP_002682.2| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|379030588|ref|NP_001243778.1| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|50403732|sp|P28340.2|DPOD1_HUMAN RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase subunit delta p125
gi|21885469|gb|AAM76971.1| polymerase (DNA directed), delta 1, catalytic subunit [Homo
sapiens]
gi|119592262|gb|EAW71856.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa,
isoform CRA_a [Homo sapiens]
gi|119592263|gb|EAW71857.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa,
isoform CRA_a [Homo sapiens]
Length = 1107
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDS 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|260826580|ref|XP_002608243.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
gi|229293594|gb|EEN64253.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
Length = 1286
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP++R+FG +EG VHG PY Y+P E E Q A LN KD
Sbjct: 209 VPIVRMFGVTMEGNSVVCHVHGFSPYFYVPAKPEFKVEHCAQFRDALNKVVLNDMRSNKD 268
Query: 147 SV-QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG----AVFNERF 200
+V Q V + + +K MYG+H ++R FL+I + P ++ + LL G +
Sbjct: 269 NVKQAVLAVEMMEKENMYGFHGNQRLPFLRITVALPRLIAPAKRLLEQGFSCPGYGLHGY 328
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADVK------ 253
Q +ES++ + ++F +D + G + IE + K+R D SL Q+E DV
Sbjct: 329 QSFESNVDFEIRFMVDTGVIGCNWIELPVGKYRLKDQLKSL-----AQIEVDVDPQGAID 383
Query: 254 -AESIVVDMAANDSDVA 269
A+ ++ D+ N D++
Sbjct: 384 HAKQVISDLLCNRVDIS 400
>gi|402465764|gb|EJW01429.1| hypothetical protein EDEG_00023 [Edhazardia aedis USNM 41457]
Length = 671
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALG 143
++ PVIR+FG G VHG FPY Y+ + E +L+ + + +
Sbjct: 19 VRDRPVIRIFGTEKNGTPVLCHVHGFFPYFYVDHYQ---IEKLLEIKGFTDLFSASFNTQ 75
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER---F 200
YK + + + I +K +Y Y + FLK++ + +++ L +G V N R F
Sbjct: 76 YKKN--KLLAVEIVEKQSVYNYSDGKTKFLKLVFNNVSSIKQVKSFLESGIVLNGRRFMF 133
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIE 226
+ YE+H+ Y+L+F ID N+YGMS +E
Sbjct: 134 RVYENHVAYVLRFMIDKNMYGMSYVE 159
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 18 AHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
H D H ++R+ PVIR+FG G VHG FPY Y+
Sbjct: 10 THVDHYHDDVRDR-----PVIRIFGTEKNGTPVLCHVHGFFPYFYV 50
>gi|348533053|ref|XP_003454020.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oreochromis
niloticus]
Length = 1105
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGY 144
KVP+IR+FG G C VHG PY Y+P + T L + ++ A L
Sbjct: 114 KVPIIRMFGVTDNGNSVCCHVHGFAPYFYVPAPN-GFTSAHLVEFQKELNSAVLKDMRSN 172
Query: 145 KDSVQ-HVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFN----E 198
KD++ V + I +K MYGYH FL+I + P ++ + LL G F+
Sbjct: 173 KDNISVTVLAVDITRKESMYGYHGKRIIDFLRITMAMPRLIAPAKRLLEQGFKFSHFPTS 232
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSH--------CQLEA 250
+Q YE++I + ++F +D ++ G IE K+R E S S CQ E
Sbjct: 233 NYQSYEANIDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSTDNSSSQSPSKASLCQYEV 292
Query: 251 DV 252
DV
Sbjct: 293 DV 294
>gi|410054333|ref|XP_003316601.2| PREDICTED: DNA polymerase delta catalytic subunit, partial [Pan
troglodytes]
Length = 648
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 35 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDN 89
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 90 RGGKELTGPAVLAMELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 149
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 150 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYTLRLKE---KATQCQLEADVLWS 206
Query: 256 SIV 258
+V
Sbjct: 207 DVV 209
>gi|332241130|ref|XP_003269738.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit, partial [Nomascus leucogenys]
Length = 1071
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E + + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHL-----GDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDADIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
Length = 1100
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIAL 142
I VPV+R+FG EG C VHG PYLY+ ++ L + ++DK+ LN
Sbjct: 110 IGPVPVMRMFGITQEGNSVCAHVHGFTPYLYVAAPR-GFGKSHLAEFRTALDKSVLNDMR 168
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF-NER 199
K++VQ V + + ++ + GY+ +E+ +F+++ + P ++ ++ LL + +
Sbjct: 169 SNKENVQEAVLDVELVERQSIMGYNGEEKFSFIRVSVALPRLLAAVKRLLEKEQMMPSMD 228
Query: 200 FQP---YESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADVK-A 254
FQ YES+I + ++F +D N+ G S IE K+R L + CQ+E DV
Sbjct: 229 FQDCRVYESNIDFDIRFMVDTNVVGCSWIEIPQGKWRIRRKGKGLALETRCQIEIDVAYN 288
Query: 255 ESIVVDMAANDSDVA 269
E IV D S VA
Sbjct: 289 EFIVHDPEGEWSKVA 303
>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
Length = 1102
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIAL 142
I VP++R++G +EG C VHG PY ++ + S+++A LN
Sbjct: 109 IPPVPIMRMYGITMEGNSVCCHVHGFSPYFFV-LAPASFKSQDCKPFKDSLNRAVLNDMR 167
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFNER- 199
G +D++Q V + + K MYGYH + E FLKI + P ++ + LL ++ E
Sbjct: 168 GNRDNLQEAVLMVEMVHKTNMYGYHGENESLFLKITMALPRLIAPAKRLLEKEGIYPENP 227
Query: 200 ---FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-------LSHCQLE 249
F+ +E++I + ++F +D + G IE K++ +++ P S CQ E
Sbjct: 228 SYCFKAFEANIDFDIRFMVDTHTTGCCWIELPEGKWQLRRQSNQPGTTSSLLYTSRCQFE 287
Query: 250 ADVKAESIVV 259
DV S++
Sbjct: 288 VDVAYNSLIA 297
>gi|324120712|dbj|BAJ78747.1| DNA polymerase delta catalytic subunit [Nomadacris japonica]
Length = 1092
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIALGY 144
VP++R++G ++ C VHG PY ++ + ET Q +++KA+ ++
Sbjct: 112 VPIMRMYGITMDRNSVCCHVHGFSPYFFVS-APDGFKETHCQSFREALNKAVLADMRSNR 170
Query: 145 KDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGAVFNE----R 199
++ Q V + I K+ ++GYH D +TF+KI + P ++ + LL +F +
Sbjct: 171 EEVQQAVLAVEIVKRQTLFGYHGQDLQTFIKITVALPRLIAPAKRLLEKEVIFPALGPHQ 230
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
+Q YES+I + ++F +D ++ G S ++ K+R + S CQ+ D+ E ++
Sbjct: 231 YQAYESNIDFDIRFMVDTHMVGCSWVQLPAGKWRPRPTKQVQ--SRCQIXVDISWEDLIA 288
>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
Length = 1096
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIAL 142
I VPV+R+FG +EG C VHG PY YI ++ E ++L ++D K +
Sbjct: 99 IGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPNQ-FEEHHCEKLQKALDQKVIADIR 157
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-R 199
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + +E
Sbjct: 158 NNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEID 217
Query: 200 FQ---PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
FQ +E++I + ++F +D ++ G + IE M +R + S P S CQ+E DV
Sbjct: 218 FQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274
>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
Length = 1002
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIA 141
I VP++R+FG +EG C VHG PYL++ + ++ + +++KA+ ++
Sbjct: 13 IGPVPIMRMFGITMEGNSICCHVHGFSPYLFVT-APKTFDDSHCEPFKTALNKAVIADMR 71
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFNER- 199
++ + + + + K+ + Y D + F+KI + P ++ ++ LL G ++ +
Sbjct: 72 SNRENVTEAILSVELAKRKSLMHYSGDSDNLFIKITVALPRLVAAVKRLLEKGDIYPDGG 131
Query: 200 ---FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADVKAE 255
++ +E++I + ++F +D + G S IE K+R + S PK +S CQ+E D+ +
Sbjct: 132 LHDYRAFETNIDFDIRFMVDTGVVGCSWIELPAGKWRLRNGFSNPKPISRCQIEVDIGWD 191
Query: 256 SIVVDMAAND 265
+ V + D
Sbjct: 192 AFVAKVPEGD 201
>gi|324120748|dbj|BAJ78765.1| DNA polymerase delta catalytic subunit [Vespa analis insularis]
Length = 1105
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYK 145
V ++R+FG +G C VHG PYL++ T + ++D+A+ + +
Sbjct: 119 VAIMRMFGVTEQGNSICCHVHGFCPYLFVTAPQN-FTNAHCKPFKDALDQAVKKDMKSNQ 177
Query: 146 DSVQH-VFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGAVFNE---RF 200
++VQ + + I K +Y Y D+ FLKI + P ++ + L V+NE +
Sbjct: 178 NTVQEAILAVEIVYKQTVYTYTGNDKNAFLKITVALPKFIASCKRLFEKEIVYNEFNHTY 237
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
P+E++I + ++F +D ++ G IE N K R +LP +S CQLE D+ ++ +
Sbjct: 238 TPFETNIDFDIRFMVDTSVVGCCWIELPPNTWKLRGQHGHTLPVISRCQLEIDIAWDAFI 297
Query: 259 VDMAAND-SDVA 269
A + S VA
Sbjct: 298 AHPAEGEWSKVA 309
>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
Length = 1092
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIAL 142
I VPV+R+FG +EG C VHG PY YI + E ++L ++D K +
Sbjct: 99 IGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPRQ-FEEHHCEKLQKALDQKVIADIR 157
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-R 199
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + +E
Sbjct: 158 NNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEID 217
Query: 200 FQ---PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
FQ +E++I + ++F +D ++ G + IE M +R + S P S CQ+E DV
Sbjct: 218 FQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274
>gi|410258776|gb|JAA17355.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
gi|410333287|gb|JAA35590.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
Length = 1107
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAMELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYTLRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|324120716|dbj|BAJ78749.1| DNA polymerase delta catalytic subunit [Teleogryllus emma]
Length = 1089
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-- 144
VPV+R++G +EG C VHG PY ++ + ++ + +++ A+ +A Y
Sbjct: 109 VPVMRMYGVTMEGNSVCCHVHGFSPYFFVS-APDGFSDKHCHEFKEALNSAM-LADNYIA 166
Query: 145 KDSVQ-HVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFNE---- 198
+D V V + I KK M GY ++ F+K+ + P H++ + LL G F+
Sbjct: 167 RDKVPVAVLAVEIVKKQNMVGYRGEDLSVFIKVTVTLPRHIAGAKRLLERGISFSSLPPH 226
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+Q +ES+I + ++F +D + G S +E ++R S+T + S CQ+E DV + +
Sbjct: 227 SYQFFESNIDFDIRFMVDAEVVGCSWVELPAGEWRLRSKTDMK--SRCQIEVDVAWDKFI 284
>gi|397485032|ref|XP_003813667.1| PREDICTED: DNA polymerase delta catalytic subunit [Pan paniscus]
Length = 1107
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P E M + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHM-----GDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I + P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAMELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|72392719|ref|XP_847160.1| DNA polymerase zeta catalytic subunit [Trypanosoma brucei TREU927]
gi|62359205|gb|AAX79648.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma
brucei]
gi|70803190|gb|AAZ13094.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1958
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 143/349 (40%), Gaps = 63/349 (18%)
Query: 6 IVTIDFFMSKPIAHF-DPVHSELRNLVIQKVPVIRVFG-NNIEGKKTCVFVHGVFPYLYI 63
+V+I++ + +P A D V S + V + P++ +FG EG Y+
Sbjct: 5 VVSIEYTLQRPNAALGDAVMSPMFRRVSSRCPILHIFGYTTTEGNDRAAGEKS-----YV 59
Query: 64 PFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
P I+E+ + S IQ+ V C +HGV+PY ++ + I+
Sbjct: 60 P-REAAISESKLDS------IQRYSV-------------CAHIHGVYPYFFVQRSNSRIS 99
Query: 124 E----TMLQQLA----ASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKI 175
T L+ +A +S A D Q + H+ + P YGYH ++ F K+
Sbjct: 100 AMQFGTQLESVAMEALSSGHNKSAAAPRPHDRQQLIHHVDVVWLLPFYGYHGKKQPFFKV 159
Query: 176 LLYEPYHMSKLEDLL-LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI--------- 225
+ +P +S+ LL + ++ YE+H P+ QF DY GM
Sbjct: 160 YVVDPAMVSRFLHLLYCTKHMGGRQWLVYEAHSPFHFQFMADYGAKGMGAFFIPSCTARS 219
Query: 226 ---------EFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAA---NDSDVATSGG 273
+ N+ R + E + +LS Q+E DV A S+ A ++ +
Sbjct: 220 KLPDSVQPEQLNIAAVRPEGEPA--RLSCAQIEVDVSASSLRFRDGAVQPGENLLTARRN 277
Query: 274 ITRYLSDVLLNSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLK 322
+ +Y +D+ ++ A+L G LL S Q D+ GA+ L+ +
Sbjct: 278 VRQYFADLGVDD--AVLRGCTSGLLARRFTVSDQQRCDL--GAVLLRKR 322
>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
Length = 1092
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFHHEPITETMLQQLAASIDKALN 139
VPV+R+FG ++G C VHG PY YI +H E + +++ Q+ A I
Sbjct: 102 VPVVRMFGVTMQGNSVCCHVHGFCPYFYIEAPTKFEEYHCEKLQKSLDQKTIADIRNN-- 159
Query: 140 IALGYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN 197
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL +
Sbjct: 160 -----KDNVQEAVLMVELVEKLSIHGYNGDQKQRYIKITVTLPRFVAAASRLLKKEVIMA 214
Query: 198 E-RFQ---PYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEAD 251
E FQ +E++I + ++F +D + G + IE + RS + LP+ S CQ+E D
Sbjct: 215 EIDFQDCRAFENNIDFDIRFMVDTGVVGCNWIELPQGHWRLRSGNSKPLPE-SRCQIEVD 273
Query: 252 V 252
V
Sbjct: 274 V 274
>gi|324120760|dbj|BAJ78771.1| DNA polymerase delta catalytic subunit [Lucidina biplagiata]
Length = 1045
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VPV+R+FG EG C VHG PY Y+ P T +++A L+ +
Sbjct: 63 VPVMRMFGVTAEGHSVCCHVHGFHPYFYVLL---PSDFTDTHDFKNKLNRAVLSDVKSFA 119
Query: 146 DSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPY 203
D V + V + I + + + E + F KI + P ++ + +L NG N F +
Sbjct: 120 DKVSEAVLMVEIKEGKSLLEFTGHENSKFAKITVALPRFVAAAKRILENGVYENRSFSSF 179
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS-LPKLSHCQLEADVKAESIVV 259
ES++ L+F ID ++ G S I + K+ S P +S CQ+E DV E+IV
Sbjct: 180 ESNVDIDLRFMIDTHILGCSWIHLPLGKWHCRGNNSQWPIMSRCQIECDVSWENIVA 236
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 35 VPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
VPV+R+FG EG C VHG PY Y+
Sbjct: 63 VPVMRMFGVTAEGHSVCCHVHGFHPYFYV 91
>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
Length = 1092
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIAL 142
I VPV+R+FG +EG C VHG PY YI + E ++L ++D K +
Sbjct: 99 IGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPSQ-FEEHHCEKLQKALDQKVIADIR 157
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-R 199
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + +E
Sbjct: 158 NNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEID 217
Query: 200 FQ---PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
FQ +E++I + ++F +D ++ G + IE M +R + S P S CQ+E DV
Sbjct: 218 FQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274
>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
Length = 1092
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 11/185 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIAL 142
I VPV+R+FG +EG C VHG PYLYI T+ L + ++DK+ LN
Sbjct: 103 IGPVPVMRMFGVTMEGNSVCAHVHGFSPYLYIAAPRG-FTKAHLSEFRTALDKSVLNDMR 161
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF-NER 199
K++VQ V +++ ++ + GY+ +++ F+K+ + P ++ ++ LL + +
Sbjct: 162 SNKENVQEAVLDVALVERQSIMGYNGEDKFQFIKVTVALPRLLAAVKRLLEKEQMLPSMD 221
Query: 200 FQP---YESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKA 254
FQ YES+I + ++F +D + G S IE +R + P+ + CQ+E DV
Sbjct: 222 FQDCRVYESNIDFDIRFMVDRGVVGCSWIELPPGTWYYRKKGKMPAPE-TRCQIEVDVAY 280
Query: 255 ESIVV 259
++ +
Sbjct: 281 DAFIA 285
>gi|296234423|ref|XP_002762441.1| PREDICTED: DNA polymerase delta catalytic subunit [Callithrix
jacchus]
Length = 1107
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C VHG PY Y P E + + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGVSVCCHVHGFAPYFYTPAPPGFGPEHL-----GDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + ++GYH FL+I L P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAVELCSRESIFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEADVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
Length = 1092
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIAL 142
I VPV+R+FG +EG C VHG PY YI + E ++L ++D K +
Sbjct: 99 IGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPSQ-FEEHHCEKLQKALDQKVIADIR 157
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-R 199
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + +E
Sbjct: 158 NNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEID 217
Query: 200 FQ---PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
FQ +E++I + ++F +D ++ G + IE M +R + S P S CQ+E DV
Sbjct: 218 FQDCRAFENNIDFDIRFMVDTDVVGCNWIELPMGHWRIRNSHSKPLPESRCQIEVDV 274
>gi|380019903|ref|XP_003693840.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Apis
florea]
Length = 1105
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 27/193 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PF----HH-----EPITETMLQQLAA 132
I VP++R+FG G C VHG PYLY+ P HH E + + +L+ + +
Sbjct: 116 IPPVPIMRMFGVTELGNSVCCHVHGFSPYLYVIAPTNFNDHHCRLFKEALDKAILKDMRS 175
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLL 191
+ + NI + +V+ VF K MYGY DE++ FLKI L P +S+ + ++
Sbjct: 176 NPE---NIQVAVL-AVERVF------KQNMYGYTGDEKSLFLKITLALPRLISRCKKIVE 225
Query: 192 NGAVFNE---RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHC 246
++ +E ++ +ES+I + ++F +D ++ G S IE K R +LP + C
Sbjct: 226 EESILSEFRHQYTAFESNIDFDIRFMVDTSVVGCSWIELPPKTWKLRQHFGHNLPLTARC 285
Query: 247 QLEADVKAESIVV 259
QLE DV ++ +
Sbjct: 286 QLEVDVAWDTFIA 298
>gi|261330373|emb|CBH13357.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1958
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 63/349 (18%)
Query: 6 IVTIDFFMSKPIAHF-DPVHSELRNLVIQKVPVIRVFG-NNIEGKKTCVFVHGVFPYLYI 63
+V+I++ + +P A D V S + V + P++ +FG EG P
Sbjct: 5 VVSIEYTLQRPDAALGDAVMSPMFRRVSSRCPILHIFGYTTTEGNDRAAGEKSDVP---- 60
Query: 64 PFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
I+E+ + S IQ+ V C +HGV+PY ++ + I+
Sbjct: 61 --REAAISESKLDS------IQRYSV-------------CAHIHGVYPYFFVQRSNSRIS 99
Query: 124 E----TMLQQLA-ASIDKALNIALGYK---DSVQHVFHISICKKFPMYGYHADERTFLKI 175
T L+ +A ++ N + D Q + H+ + P YGYH ++ F K+
Sbjct: 100 AMQFGTQLESVAMEALSSGRNKSAAAPRPHDRQQLIHHVDVVWLLPFYGYHGKKQPFFKV 159
Query: 176 LLYEPYHMSKLEDLL-LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI--------- 225
+ +P +S+ LL + ++ YE+H P+ QF DY GM
Sbjct: 160 YVVDPAMVSRFLHLLYCTKHMGGRQWLVYEAHSPFHFQFMADYGAKGMGAFFIPSCTARS 219
Query: 226 ---------EFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAA---NDSDVATSGG 273
+ N+ R + E + +LS Q+E DV A S+ A ++ +
Sbjct: 220 KLPDSVQPEQLNIAAVRPEGEPA--RLSCAQIEVDVSASSLRFRDGAVQPGENLLTARRN 277
Query: 274 ITRYLSDVLLNSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLK 322
+ +Y +D+ ++ A+L G LL S Q D+ GA+ L+ +
Sbjct: 278 VRQYFADLGVDD--AVLRGCTSGLLARRFTVSDQQRCDL--GAVLLRKR 322
>gi|195172253|ref|XP_002026913.1| GL12820 [Drosophila persimilis]
gi|194112681|gb|EDW34724.1| GL12820 [Drosophila persimilis]
Length = 595
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFHHEPITETMLQQLAASIDKALN 139
VPV+R+FG ++G C VHG PY YI +H E + +++ Q+ A I
Sbjct: 102 VPVVRMFGVTMQGNSVCCHVHGFCPYFYIEAPTKFEEYHCEKLQKSLDQKTIADIRNN-- 159
Query: 140 IALGYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN 197
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL +
Sbjct: 160 -----KDNVQEAVLMVELVEKLNIHGYNGDQKQRYIKITVTLPRFVAAASRLLKKEVIMA 214
Query: 198 E-RFQ---PYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEAD 251
E FQ +E++I + ++F +D + G + IE + RS + LP+ S CQ+E D
Sbjct: 215 EIDFQDCRAFENNIDFDIRFMVDTGVVGCNWIELPQGHWRLRSGNSKPLPE-SRCQIEVD 273
Query: 252 V 252
V
Sbjct: 274 V 274
>gi|324120728|dbj|BAJ78755.1| DNA polymerase delta catalytic subunit [Blattella nipponica]
Length = 1039
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIALGY 144
VP++R+FG +EG C VHG PYL++ T T +++KA+ ++
Sbjct: 58 VPIMRMFGVTMEGNSVCCHVHGFSPYLFVSAPSN-FTNTDCHPFKVALNKAVLADMRSNK 116
Query: 145 KDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVF----NER 199
++ + + I + + + GY + ++ F+KI + P ++ + LL ++ + +
Sbjct: 117 ENIREAILAIELVHRLNLLGYAGENKKGFIKITVALPRLIAACKRLLERETIYPPAGSHQ 176
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
FQ +ES+I + ++F +D + G S +E ++ + ++ +S CQ+EADV E +V
Sbjct: 177 FQAFESNIDFDIRFMVDTEVVGCSWVELPAGQWTKRAPSAF--ISRCQIEADVSWEELV 233
>gi|324120698|dbj|BAJ78740.1| DNA polymerase delta catalytic subunit [Mnais pruinosa pruinosa]
Length = 1095
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 19/188 (10%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL- 142
I VP++R++G +EG C VHG PY ++ + ++ + +ALN A+
Sbjct: 105 IGPVPIMRMYGVTMEGHSVCCHVHGFSPYFFV-----LLPDSFNEDHCGPFKEALNKAII 159
Query: 143 ----GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSK----LEDLLLN 192
G +D+V + V + I K ++GY ++ FLK+ L P + LE ++
Sbjct: 160 ADMRGNRDNVTEAVLAVEIQMKENIFGYRGAKKVHFLKVTLALPKLIPAAKRLLEKEVIY 219
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKL--SHCQLEA 250
GA+ +Q +ES+I + ++F +D L G S +E K+ S+ LP L S CQLE
Sbjct: 220 GALGVHPYQAFESNIDFDIRFMVDTGLVGCSWVELPADKWSIRSK-GLPPLAQSRCQLEV 278
Query: 251 DVKAESIV 258
DV E +V
Sbjct: 279 DVSWEEMV 286
>gi|159472579|ref|XP_001694422.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276646|gb|EDP02417.1| predicted protein [Chlamydomonas reinhardtii]
Length = 135
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 49/176 (27%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
F++ IV++D++M+ PI H D S L + +VPVIR+FG+ G+K CV VH FPY
Sbjct: 9 FTIRIVSLDYYMAPPIPHLDFCFSSLEGTTVDQVPVIRIFGSTPAGQKACVHVHRAFPYF 68
Query: 62 YIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP 121
Y+P+ + P G C
Sbjct: 69 YVPYD------------------ESFPTTPNEGEWAMCSAVC------------------ 92
Query: 122 ITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL 177
L+++A +I+ A Q V + + + P YGYH E+ F+K++L
Sbjct: 93 -----LRRMALAIEAA--------APRQVVHALQLVRGRPFYGYHLQEQLFIKVVL 135
>gi|186532719|ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=Protein EMBRYO DEFECTIVE 2780
gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
thaliana]
gi|332010438|gb|AED97821.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1095
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL + P+IR+FG EG C FVHG PY YI P P + Q
Sbjct: 110 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLEG 169
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
+ N V+ + + K+ MY +TFLKI + P ++ +L G
Sbjct: 170 RMRESNKNAKVPKFVKRIEMVQ--KRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRG 227
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ + FQ YES+I ++L+F +D ++ G + IE K++ ++ T LS+CQLE
Sbjct: 228 LQIDGLGMKSFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNART----LSYCQLE 283
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 24 HSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
H EL + P+IR+FG EG C FVHG PY YI
Sbjct: 110 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYI 149
>gi|334188613|ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|332010439|gb|AED97822.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1112
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL + P+IR+FG EG C FVHG PY YI P P + Q
Sbjct: 110 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLEG 169
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
+ N V+ + + K+ MY +TFLKI + P ++ +L G
Sbjct: 170 RMRESNKNAKVPKFVKRIEMVQ--KRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRG 227
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ + FQ YES+I ++L+F +D ++ G + IE K++ ++ T LS+CQLE
Sbjct: 228 LQIDGLGMKSFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNART----LSYCQLE 283
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 24 HSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
H EL + P+IR+FG EG C FVHG PY YI
Sbjct: 110 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYI 149
>gi|66511388|ref|XP_623795.1| PREDICTED: DNA polymerase delta catalytic subunit [Apis mellifera]
Length = 1105
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 27/190 (14%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PF----HH-----EPITETMLQQLAASID 135
VP++R+FG G C VHG PYLY+ P HH E + + +L+ + ++ +
Sbjct: 119 VPIMRMFGVTELGNSVCCHVHGFSPYLYVIAPTNFNDHHCKLFKEALDKAILKDMRSNPE 178
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGA 194
NI + +V+ VF K MYGY DE++ FLKI L P +S+ + ++
Sbjct: 179 ---NIQIAVL-AVERVF------KQNMYGYTGDEKSLFLKITLALPRLVSRCKKIVEEET 228
Query: 195 VFNE---RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLE 249
+ +E ++ +ES+I + ++F +D ++ G S IE K R +LP + CQLE
Sbjct: 229 ILSEFKHQYTAFESNIDFDIRFMVDTSVVGCSWIELPPKTWKLRQHFGHNLPLTARCQLE 288
Query: 250 ADVKAESIVV 259
DV ++ +
Sbjct: 289 VDVAWDTFIA 298
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 35 VPVIRVFGNNIEGKKTCVFVHGVFPYLYI--PF----HH-----EPITETIV---HSELR 80
VP++R+FG G C VHG PYLY+ P HH E + + I+ S
Sbjct: 119 VPIMRMFGVTELGNSVCCHVHGFSPYLYVIAPTNFNDHHCKLFKEALDKAILKDMRSNPE 178
Query: 81 NLVIQKVPVIRVFGNNVEG 99
N+ I + V RVF N+ G
Sbjct: 179 NIQIAVLAVERVFKQNMYG 197
>gi|395751602|ref|XP_002829654.2| PREDICTED: DNA polymerase delta catalytic subunit [Pongo abelii]
Length = 445
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R FG EG C +HG PY Y P + + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGFSVCCHIHGFAPYFYT-----PAPPGFGPEHLGDLQRELNLAISRDN 176
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNG----AV 195
G + + V + +C + M+GYH FL+I L P ++ LL G +
Sbjct: 177 RGGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGL 236
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F PYE+++ + ++F +D ++ G + +E K+ + K + CQLE DV
Sbjct: 237 GTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKE---KATQCQLEVDVLWS 293
Query: 256 SIV 258
+V
Sbjct: 294 DVV 296
>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
Length = 1093
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 20/185 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP--ITETMLQQLAASIDKAL--NIAL 142
VP++R++G + G C VHG PY ++ H P T + ++DKAL ++
Sbjct: 112 VPIMRMYGITMSGNSVCCHVHGFSPYFFV---HAPDNFTNNHCEGFRRALDKALLADMRS 168
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNE--- 198
+ ++ V + + + + GY D FLKI + P ++ + LL V++E
Sbjct: 169 NKNEVIEAVLEVEVVHRQSLVGYRGDSPLKFLKITVALPRFIAAAKRLLEREIVYHEPSM 228
Query: 199 ---RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVK 253
+Q YE++I + ++F +D +L G S +E + K+ R +E +S CQLE DV
Sbjct: 229 SHHTYQAYETNIDFDIRFMVDADLVGCSWVELPVGKWYLRGHNE----HVSRCQLEVDVS 284
Query: 254 AESIV 258
E ++
Sbjct: 285 WELMI 289
>gi|307203676|gb|EFN82660.1| DNA polymerase delta catalytic subunit [Harpegnathos saltator]
Length = 1054
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFHHEPITETMLQQLAASIDKALN 139
VP++R+FG +G C VHG PYL++ +H +P E + Q + + N
Sbjct: 68 VPIMRMFGITEQGNSVCCHVHGFCPYLFVLAPSKFTNYHCKPFKEALNQAVKKDMKSNPN 127
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG---AV 195
+ + + + + K MYGY +E+ FLKI + P ++ + LL V
Sbjct: 128 ------NIQEAILAVELVYKQSMYGYTGEEKLPFLKITVAVPRLIAPCKRLLEQDTVYTV 181
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVK 253
FN ++ +ES+I + ++F +D ++ G IE K R L + CQLE DV
Sbjct: 182 FNHHYKAFESNIDFDIRFMVDTSVVGCCWIELKPKTWKLRGQHGHVLELTTRCQLEIDVA 241
Query: 254 AESIVV 259
++ +
Sbjct: 242 WDAFIA 247
>gi|8777309|dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
Length = 1081
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL + P+IR+FG EG C FVHG PY YI P P + Q
Sbjct: 108 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYIACPPGMGPDDISNFHQSLEG 167
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
+ N V+ + + K+ MY +TFLKI + P ++ +L G
Sbjct: 168 RMRESNKNAKVPKFVKRIEMVQ--KRSIMYYQQQKSQTFLKITVALPTMVASCRGILDRG 225
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ + FQ YES+I ++L+F +D ++ G + IE K++ ++ T LS+CQLE
Sbjct: 226 LQIDGLGMKSFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNART----LSYCQLE 281
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 24 HSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
H EL + P+IR+FG EG C FVHG PY YI
Sbjct: 108 HKELLPGSSGQAPIIRMFGVTREGNSVCCFVHGFEPYFYI 147
>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1097
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 34/186 (18%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIP-------FHHEPITETMLQQLAASID---- 135
VPVIR++G EG VHG PY YIP H + + ++ L A I
Sbjct: 120 VPVIRLYGVTEEGNSVFTHVHGFVPYFYIPCPPNFEDRHRGALQQAIITALRARIRGDEN 179
Query: 136 --KALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
++L + +G+ Q + S + R FL+I L P + K++ LL +G
Sbjct: 180 RIRSLCLGVGFAKDKQSLLGYSF----------GNTRDFLQIYLAMPSLLPKVKTLLADG 229
Query: 194 AVFNERFQ-----PYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHC 246
+ Q YES++P++L+F +D + G S IE RSD + K S C
Sbjct: 230 IHVDGYGQLCASTSYESNVPFVLRFMVDKEIPGASWIELPKGTYSIRSDYK----KRSRC 285
Query: 247 QLEADV 252
QLE DV
Sbjct: 286 QLEVDV 291
>gi|350397570|ref|XP_003484917.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus impatiens]
Length = 1090
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 27/193 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF------HH-----EPITETMLQQLAA 132
I VP++R+FG G C VHG PYLY+ HH E + + ML+ + +
Sbjct: 101 IPPVPIMRMFGVTELGNSVCCHVHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRS 160
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLL 191
+ + L +V+ ++ K MYGY +E++ FLKI + P +++ + ++
Sbjct: 161 NPENIQEAVL----AVERLY------KQNMYGYTGNEKSLFLKITVALPRLVARCKKVVE 210
Query: 192 NGAV---FNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHC 246
+ FN ++ +ES+I + ++F +D ++ G S IE K R + +LP S C
Sbjct: 211 EETILSEFNHCYRAFESNIDFDIRFMVDTSVVGCSWIELPPKTWKLRQHNGHNLPFTSRC 270
Query: 247 QLEADVKAESIVV 259
QLE D+ ++ +
Sbjct: 271 QLEVDIAWDAFIA 283
>gi|324120710|dbj|BAJ78746.1| DNA polymerase delta catalytic subunit [Karoophasma biedouwense]
Length = 992
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYK 145
VPV+R++G ++G C VHG PY ++ + TE A+++KA+ L K
Sbjct: 16 VPVMRIYGVTMDGNSVCCHVHGFSPYFFVS-APDNFTEDHCYPFMAALNKAVIADLRSNK 74
Query: 146 DSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF----NER 199
+ +Q V + I + ++GY + +T FL+I + P ++ + LL V+
Sbjct: 75 EEIQEAVLAVEIVSRQTVFGYWGEGKTNFLRITVALPRLIAAAKRLLERELVYPPLGTYD 134
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+QP+ES+I + ++F +D + G S +E ++ S +S CQ+E DV E ++
Sbjct: 135 YQPFESNIDFDIRFMVDTQMVGCSWVELPARSWKPRSVL----MSRCQIEVDVSWEKLI 189
>gi|190347734|gb|EDK40067.2| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC
6260]
Length = 1593
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 34/166 (20%)
Query: 102 TCVFVHGVFPYLYI--PFHHEPITETMLQQLAASI----------------DKALNIAL- 142
T + VH FPY YI P H P+ +T++ L + + +K N L
Sbjct: 107 TVLHVHNFFPYFYIDAPVHSVPL-QTIISYLESCLGESFLRNPGDDDEYENEKGTNTNLP 165
Query: 143 -----GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL----LNG 193
G + + IS CK P+YGY + LK+ L P + ++L L+ +N
Sbjct: 166 EATAGGSDQKRRFIARISRCKGTPVYGYQVGNKCMLKVSLLSPVYKTRLVRLIHDKKINF 225
Query: 194 AVF---NERFQP--YESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
A F ++F+P YE+H+P +LQF D+NLYG +E + FRS
Sbjct: 226 ANFCSTKQKFKPNVYETHLPMLLQFLTDFNLYGCGWVELDSFWFRS 271
>gi|350397573|ref|XP_003484918.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus impatiens]
Length = 1104
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 27/193 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF------HH-----EPITETMLQQLAA 132
I VP++R+FG G C VHG PYLY+ HH E + + ML+ + +
Sbjct: 115 IPPVPIMRMFGVTELGNSVCCHVHGFNPYLYVTAPQNFNEHHCRLFKEALNKAMLKDMRS 174
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLL 191
+ + L +V+ ++ K MYGY +E++ FLKI + P +++ + ++
Sbjct: 175 NPENIQEAVL----AVERLY------KQNMYGYTGNEKSLFLKITVALPRLVARCKKVVE 224
Query: 192 NGAV---FNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHC 246
+ FN ++ +ES+I + ++F +D ++ G S IE K R + +LP S C
Sbjct: 225 EETILSEFNHCYRAFESNIDFDIRFMVDTSVVGCSWIELPPKTWKLRQHNGHNLPFTSRC 284
Query: 247 QLEADVKAESIVV 259
QLE D+ ++ +
Sbjct: 285 QLEVDIAWDAFIA 297
>gi|332028725|gb|EGI68756.1| DNA polymerase delta catalytic subunit [Acromyrmex echinatior]
Length = 1010
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPITETMLQQLAASIDKALN 139
VP++R+FG +G C VHG PYL++ H +P E + Q A D N
Sbjct: 106 VPIMRMFGVTEQGNSVCCHVHGFCPYLFVSAPSNFTNDHCKPFKEALNQ--AVKKDMKSN 163
Query: 140 IALGYKDSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-- 195
D++Q + + + K MYGY +++ FLKI + P ++ + LL V
Sbjct: 164 -----PDNIQDAILAVELVYKQSMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYT 218
Query: 196 -FNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADV 252
FN ++ +ES+I + ++F +D ++ G S IE K R L ++ CQLE DV
Sbjct: 219 AFNYHYRAFESNIDFDIRFMVDTSVVGCSWIELPPGSWKLRGQYGHMLELITRCQLEVDV 278
Query: 253 KAESIVV 259
++ V
Sbjct: 279 AWDAFVA 285
>gi|324120688|dbj|BAJ78735.1| DNA polymerase delta catalytic subunit [Petrobiellus takunagae]
Length = 1005
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 19/186 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R++G EG C VHG PY Y+ +P ET ++ ++LN +
Sbjct: 19 VPVMRMYGVTAEGNSVCCHVHGFSPYFYV----QP-PETFKREHCGPFKESLNRFILKDM 73
Query: 143 -GYKDSV-QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNE- 198
+DS+ + V + I ++ +Y Y ++ +FLKI+L P ++ + LL +VF
Sbjct: 74 KTNRDSLSEAVLCVEIVERENIYSYRGGKKLSFLKIILALPKLIAPAKRLLERESVFPTL 133
Query: 199 ---RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR---SDSETSLPKLSHCQLEADV 252
+ +ES+I + ++F +D + G + IE K++ D + +L +S CQ+E DV
Sbjct: 134 GPHSYAAFESNIDFDIRFMVDAEIVGCNWIELPASKWQLRTRDDKRTLQPVSRCQIECDV 193
Query: 253 KAESIV 258
E +V
Sbjct: 194 SWEILV 199
>gi|195327921|ref|XP_002030665.1| GM24454 [Drosophila sechellia]
gi|194119608|gb|EDW41651.1| GM24454 [Drosophila sechellia]
Length = 573
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIAL 142
I VPV+R+FG +EG C VHG PY YI ++ E ++L ++D K +
Sbjct: 99 IGPVPVVRMFGVTMEGNSVCCHVHGFCPYFYIEAPNQ-FEEHHCEKLQKALDQKVIADIR 157
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-R 199
KD+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + +E
Sbjct: 158 NNKDNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMSEID 217
Query: 200 FQ---PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
FQ +E++I + ++F +D ++ G + IE + +R + S P S CQ+E DV
Sbjct: 218 FQDCRAFENNIDFDIRFMVDTDVVGCNWIELPIGHWRIRNSHSKPLPESRCQIEVDV 274
>gi|330793430|ref|XP_003284787.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
gi|325085281|gb|EGC38691.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
Length = 1026
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
+PV+R+FG G VHG PY +I Q S KALN+ + +D
Sbjct: 59 LPVVRLFGVTKNGNSVLCKVHGFLPYFFIS-----CPPNFTQSDCKSFKKALNVNIKVED 113
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE------- 198
V I I +K + GY+ + T F++I L P +++ D+L G E
Sbjct: 114 IV---ISIRIVQKKSIMGYNPNPLTDFIEITLILPKFVTRCRDILETGKHRFEIPGQPFR 170
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
++Q YES+IP+ L+F ID + G S IE K+ + S ++S CQ+E D+ + ++
Sbjct: 171 QYQTYESNIPFALRFLIDKKIPGCSWIELPANKY----QFSENQVSTCQIEVDISNKELL 226
>gi|115473971|ref|NP_001060584.1| Os07g0669000 [Oryza sativa Japonica Group]
gi|34395195|dbj|BAC83595.1| DNA polymerase zeta catalytic subunit-like protein [Oryza sativa
Japonica Group]
gi|113612120|dbj|BAF22498.1| Os07g0669000 [Oryza sativa Japonica Group]
gi|215708854|dbj|BAG94123.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 146
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 49/178 (27%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+ S+ IV++D++M+ P+ FD +S +++VPVIR++G+ G+KTC+ +H V P+
Sbjct: 17 VLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVLPF 76
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
LY+ P E ++H NVE K F+ G
Sbjct: 77 LYV-----PCKEDLLH-------------------NVE--KGNSFISG------------ 98
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLY 178
L + ++KAL I K +HV ++ + +YGYH E F+KI LY
Sbjct: 99 ---------LLSDLEKALQIRSSSKK--KHVHGCTLVRAKKLYGYHTSEELFVKIYLY 145
>gi|146414932|ref|XP_001483436.1| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC
6260]
Length = 1593
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 34/166 (20%)
Query: 102 TCVFVHGVFPYLYI--PFHHEPITETMLQQLAASI----------------DKALNIAL- 142
T + VH FPY YI P H P+ +T++ L + + +K N L
Sbjct: 107 TVLHVHNFFPYFYIDAPVHSVPL-QTIISYLESCLGESFLRNPGDDDEYENEKGTNTNLP 165
Query: 143 -----GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL----LNG 193
G + + IS CK P+YGY + LK+ L P + ++L L+ +N
Sbjct: 166 EATAGGSDQKRRFIARISRCKGTPVYGYQVGNKCMLKVSLLSPVYKTRLVRLIHDKKINF 225
Query: 194 AVF---NERFQP--YESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
A F ++F+P YE+H+P +LQF D+NLYG +E + FRS
Sbjct: 226 ANFCSTKQKFKPNVYETHLPMLLQFLTDFNLYGCGWVELDSFWFRS 271
>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
Length = 1092
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYK 145
VPV+R+FG +EG C VHG PY YI + + +L ++DK + + G K
Sbjct: 106 VPVVRMFGVTMEGNSVCCHVHGYCPYFYITAPRD-FEQRHCSELHEALDKKVIADMRGNK 164
Query: 146 DSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF-NERFQ- 201
D+VQ V + + ++ ++GY D++ T++KI + P ++ LL + N FQ
Sbjct: 165 DNVQEAVLAVELVQRLNIHGYQGDDKQTYIKITVTMPRFVAAASRLLKKEVIMSNFDFQD 224
Query: 202 --PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKL-SHCQLEADV 252
+E++I + ++F +D ++ G + I+ +R S P S CQ+E DV
Sbjct: 225 CRAFENNIDFDIRFMVDTHVVGCNWIDLPPGVWRLRGHNSKPATESRCQIEVDV 278
>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
Length = 1095
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKAL------ 138
VPV+R+FG +EG C VHG Y YI P + E Q+ A++ +AL
Sbjct: 108 VPVVRMFGVTMEGNSVCCHVHGYCSYFYISAPKNFE-------QRHCAALHEALDRKVIA 160
Query: 139 NIALGYKDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLN---- 192
+I G KD VQ V + + ++ ++GY D +++++KI + P ++ LL N
Sbjct: 161 DIRGGNKDKVQEAVLAVELVQRLNIHGYQGDAKQSYIKITVTLPRFVAAASRLLKNEVIM 220
Query: 193 GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEAD 251
GA + + +E++I + ++F ++ ++ G + IE +R S P S CQLE D
Sbjct: 221 GAFDFQDCRAFENNIDFDIRFMVETSVVGCNWIELPAGAWRLRGRNSKPAPESRCQLEVD 280
Query: 252 VKAESIVVDMAAND-SDVATSGGITRYLS-DVLLNSMRAILLGQEPHLLMDP 301
V + + + S VA R LS D+ R I P MDP
Sbjct: 281 VAYDQFISHEPEGEWSKVAP----LRILSFDIECAGRRGIF----PEAKMDP 324
>gi|321470374|gb|EFX81350.1| hypothetical protein DAPPUDRAFT_317527 [Daphnia pulex]
Length = 1139
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGY 144
V +R+FG + C VHG PYLY+ P + P +Q +++KAL
Sbjct: 161 VATMRIFGVTRQQNSICCHVHGFAPYLYVTVPTNFMP---EQCRQFQEALNKALIADSRS 217
Query: 145 KDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG---AVFNE- 198
K + + V + ++ MYGYH +++ FLKI L P ++ + LL G A FN
Sbjct: 218 KQEIHEFVLAVEFMERESMYGYHENKKCPFLKITLALPPFIAAAKRLLERGEIAAPFNSM 277
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ YES+I + +++ +D ++ G + IE +R +++ ++ CQ+E DV ++
Sbjct: 278 AYVAYESNIDFEIRYMVDADIVGCNWIELPPGSWRLRPHSTVKPMTRCQIEVDVAWNKVI 337
>gi|414888041|tpg|DAA64055.1| TPA: hypothetical protein ZEAMMB73_677675 [Zea mays]
Length = 1602
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 178 YEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
Y P+ +S+ L+L+GAV N FQPYESHIPY+L F +DYNLYGM +I KFR
Sbjct: 76 YYPHEVSRAASLVLSGAVSNRSFQPYESHIPYLLHFLVDYNLYGMGHIHVKNFKFR 131
>gi|109125666|ref|XP_001116065.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Macaca
mulatta]
Length = 1327
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--HHEPITETMLQQLAASIDKALNIAL-- 142
VPV+R FG EG C +HG PY Y P EP + + + LN+A+
Sbjct: 122 VPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFEP-------EHLGDLQRELNLAISR 174
Query: 143 ----GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG---- 193
G + + V + +C + M+GYH + FL+I L P ++ LL G
Sbjct: 175 DNRGGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVA 234
Query: 194 AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
+ F PYE+++ + ++F +D ++ G + +E K+ + K + CQLEADV
Sbjct: 235 GLGTPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYTLRLKK---KTTQCQLEADVL 291
Query: 254 AESIV 258
+V
Sbjct: 292 WSDVV 296
>gi|324120708|dbj|BAJ78745.1| DNA polymerase delta catalytic subunit [Galloisiana yuasai]
Length = 994
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VPV+R++G +EG C VHG PY ++ E + KALN ++
Sbjct: 16 VPVMRMYGVTMEGNSVCCHVHGFSPYFFV-----SAPENFTDKHCLPFQKALNSSMIADL 70
Query: 143 -GYKDSVQH-VFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGAVF--- 196
++ +Q V + + ++GY D+ TFLKI + P ++ + LL V+
Sbjct: 71 RSNREGIQDAVLAVETVMRQSVFGYRGEDKTTFLKITVTLPRLIAPAKRLLEKTCVYSAL 130
Query: 197 -NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
N +Q YES+I + ++F D L G S +E K++ K CQLE DV E
Sbjct: 131 GNHDYQAYESNIDFDIRFMTDTGLVGCSWVELPPGKWK----MCATKTVRCQLEVDVSWE 186
Query: 256 SIV 258
V
Sbjct: 187 KFV 189
>gi|340714998|ref|XP_003396008.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus terrestris]
Length = 1104
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 27/193 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF------HH-----EPITETMLQQLAA 132
I VP++R+FG G C VHG PYLY+ HH E + + ML+ + +
Sbjct: 115 IPPVPIMRMFGVTELGNSVCCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRS 174
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLL 191
+ + L +V+ ++ K MYGY +E++ FLKI + P +++ + ++
Sbjct: 175 NPENIQEAVL----AVERLY------KQNMYGYTGNEKSLFLKITVALPRLVARCKKVVE 224
Query: 192 NGAV---FNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHC 246
+ FN + +ES+I + ++F +D ++ G S IE K R + +LP S C
Sbjct: 225 EETILSEFNHCYSAFESNIDFDIRFMVDTSVVGCSWIELPPKTWKLRQHNGHNLPFTSRC 284
Query: 247 QLEADVKAESIVV 259
QLE D+ ++ +
Sbjct: 285 QLEVDIAWDAFIA 297
>gi|324120766|dbj|BAJ78774.1| DNA polymerase delta catalytic subunit [Panorpa takenouchii]
Length = 1093
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIALG 143
+VPV++++G + G C VHG PYLY+ L +++KA+ ++
Sbjct: 105 QVPVMKMYGVTMAGNSVCCHVHGFSPYLYVTAPKSFENSNCL-TFKNNLNKAVIADMRSN 163
Query: 144 YKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFNE---- 198
+ + V + + +K ++GYH ++ TF+KI + P ++ + LL +++ E
Sbjct: 164 REGITEAVLQVELIQKQTLFGYHGEDLTTFIKITMALPRLIAAAKRLLEKESIYPEGGHH 223
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADVKAESI 257
++ +ES+I + ++F +D N+ G S IE + ++ PK +S CQLE DV +
Sbjct: 224 DYRAFESNIDFDIRFMVDTNVVGCSWIELPAGTWTIRNKLRDPKPISRCQLEVDVAWDQF 283
Query: 258 VV 259
+
Sbjct: 284 IA 285
>gi|81157941|dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyrenoidosa]
Length = 1087
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALG 143
+++VPV+R++G G FVHG PY Y+ T Q LAA LN L
Sbjct: 102 LKEVPVVRMYGVTEGGSSVAAFVHGFEPYFYVEAPSPSFTPDDCQALAAE----LNAHLS 157
Query: 144 YKD---SVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDL--------LL 191
KD + + + + +K M Y +R FL+I+L P ++ L L
Sbjct: 158 SKDRTKNARQCLRVQLARKQTMMHYQPQKDRLFLRIVLAGPNLVAPCRSLFEAGISLKWL 217
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
NG F R YES++ Y L+F ID + G + +E + S S K +HCQLEA
Sbjct: 218 NGQWF--RSTTYESNVLYALRFMIDCGVVGGNWVELPPGSYTLVSPQS--KQTHCQLEA 272
>gi|340714996|ref|XP_003396007.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus terrestris]
Length = 1090
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 27/193 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF------HH-----EPITETMLQQLAA 132
I VP++R+FG G C VHG PYLY+ HH E + + ML+ + +
Sbjct: 101 IPPVPIMRMFGVTELGNSVCCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRS 160
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLL 191
+ + L +V+ ++ K MYGY +E++ FLKI + P +++ + ++
Sbjct: 161 NPENIQEAVL----AVERLY------KQNMYGYTGNEKSLFLKITVALPRLVARCKKVVE 210
Query: 192 NGAV---FNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHC 246
+ FN + +ES+I + ++F +D ++ G S IE K R + +LP S C
Sbjct: 211 EETILSEFNHCYSAFESNIDFDIRFMVDTSVVGCSWIELPPKTWKLRQHNGHNLPFTSRC 270
Query: 247 QLEADVKAESIVV 259
QLE D+ ++ +
Sbjct: 271 QLEVDIAWDAFIA 283
>gi|195997435|ref|XP_002108586.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
gi|190589362|gb|EDV29384.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
Length = 1050
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI---PFHHEPITETMLQQLAASIDKA-LNIAL 142
VP+IR+FG E +HG PY Y+ P + Q ++K LN
Sbjct: 56 VPIIRMFGVTKEQHTVICHIHGFAPYFYVEVPPTCRQSEMREECQLFQDDLNKTVLNDFK 115
Query: 143 GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER- 199
K+ V Q + + + +YGYH + +T F KI + P + + LL G ++
Sbjct: 116 SNKEKVSQAILAVEVVAYCSIYGYHENRQTPFFKITVATPRVLQTTKRLLEIGFSYSSHP 175
Query: 200 ---FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSD-------SETSLPKLSHCQ 247
+Q YES+I + ++F +D N+ G + IE K+ R D +++SL + S CQ
Sbjct: 176 VCCYQTYESNIDFEIRFMVDANVVGCNWIELPATKYMIRGDHAPGWNNAQSSLNRTSRCQ 235
Query: 248 LEADVKAESIV 258
+EAD+ + +
Sbjct: 236 IEADIAWDQFI 246
>gi|156552223|ref|XP_001606357.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1086
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALG 143
I VPV+R++G +G C VHG PY ++ H + S +ALN A+
Sbjct: 97 IGPVPVMRMYGVTEQGNSVCCHVHGFSPYFFVSAH-----PSFNNSHCKSFKEALNAAVK 151
Query: 144 YKDSVQH------VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF 196
+ + + I ++ +YGY ++++ FLKI + P ++ + LL VF
Sbjct: 152 NDMKNNNDNIQDFILAVEIVERQTVYGYTGEKKSQFLKITVALPRLIAPCKRLLETQVVF 211
Query: 197 ---NERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEAD 251
+ ++ YES+I + ++F D ++ G S IE K R ++ +++ CQLE D
Sbjct: 212 PTLDHKYTAYESNIDFDIRFMADTHMVGCSWIELKPGKWKLRGKHNHNMAQITRCQLECD 271
Query: 252 VKAESIVV 259
V + V
Sbjct: 272 VAWDQFVA 279
>gi|302306271|ref|NP_982443.2| AAL099Cp [Ashbya gossypii ATCC 10895]
gi|299788440|gb|AAS50267.2| AAL099Cp [Ashbya gossypii ATCC 10895]
Length = 1464
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP---------------------ITET 125
VP+IR +G G +HG PYL+I P + T
Sbjct: 69 VPIIRFYGKLTSGHNILSHLHGALPYLFISCDAPPDELRYNSKATCHRLHVLLELALLNT 128
Query: 126 MLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSK 185
+ + K + + +++V ++S+ K P YG++ F KI L P ++
Sbjct: 129 STKSHGSESAKQSDSTEDNIECLRYVANVSVVKGVPFYGFNVGWSVFYKISLLNPRFVTL 188
Query: 186 LEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L + L +G++ YE+HIPY+LQ D+NLYG + + FR
Sbjct: 189 LANKLRDGSILGRSVSVYEAHIPYLLQTSADFNLYGCAYLNLTDCYFRG 237
>gi|374105641|gb|AEY94552.1| FAAL099Cp [Ashbya gossypii FDAG1]
Length = 1464
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP---------------------ITET 125
VP+IR +G G +HG PYL+I P + T
Sbjct: 69 VPIIRFYGKLTSGHNILSHLHGALPYLFISCDAPPDELRYNSKATCHRLHVLLELALLNT 128
Query: 126 MLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSK 185
+ + K + + +++V ++S+ K P YG++ F KI L P ++
Sbjct: 129 STKSHGSESAKQSDSTEDNIECLRYVANVSVVKGVPFYGFNVGWSVFYKISLLNPRFVTL 188
Query: 186 LEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS 234
L + L +G++ YE+HIPY+LQ D+NLYG + + FR
Sbjct: 189 LANKLRDGSILGRSVSVYEAHIPYLLQTSADFNLYGCAYLNLTDCYFRG 237
>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
Length = 1092
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID-KALNIALGYK 145
VPV+R+FG ++G C VHG PY YI + E ++L ++D K + K
Sbjct: 102 VPVVRMFGVTMDGNSVCCHVHGFCPYFYIEAPKK-FEERHCEKLQQALDQKVIADIRNNK 160
Query: 146 DSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE-RFQ- 201
D+VQ V + + +K ++GY+ D++ ++KI + P ++ LL + E FQ
Sbjct: 161 DNVQEAVLMVELVEKLNIHGYNGDKKQRYIKISVTLPRFVAAASRLLKKEVIMAEIDFQD 220
Query: 202 --PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSHCQLEADV 252
+E++I + ++F +D ++ G + IE ++R S S P S CQ+E DV
Sbjct: 221 CRAFENNIDFDIRFMVDTSVVGCNWIELPKGEWRLRSSHSKPLPESRCQIEVDV 274
>gi|340380252|ref|XP_003388637.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Amphimedon queenslandica]
Length = 777
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 65 FHHEPITETIVHSELRNLV----IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PF- 117
F H I E+ V S +R + + VPV++++G EG C VH PYLY+ PF
Sbjct: 72 FQHIDI-ESYVSSPIRGVSAYRHLPSVPVLKMYGVTQEGFSVCAHVHSFMPYLYVASPFP 130
Query: 118 HHEPITETMLQQ-LAASIDKALNIALGYKDSV-QHVFHISICKKFPMYGYHADE-RTFLK 174
PIT Q L+A+I L+ A +++ V I + K +YGY ++ TFLK
Sbjct: 131 QTTPITCKAFQDALSAAI---LSDARSSRETAPTPVLGIEVVSKSSLYGYQFNQSNTFLK 187
Query: 175 ILLYEPYHMSKLEDLLLNG----AVFNERFQPYESHIPYILQFCIDYNLYGMSNIE---- 226
++L P ++ + LL G +V + F +ES+I Y ++F ID ++ G + IE
Sbjct: 188 VILSLPRFIAPAKRLLELGLDVKSVGHFSFSVFESNIEYEVRFMIDTDVVGCNWIEVPPG 247
Query: 227 -FNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+++ KF T+ + CQ+E DV + +
Sbjct: 248 KYSLRKFGPPGVTT--PTTRCQIELDVSCDDFI 278
>gi|328855214|gb|EGG04342.1| hypothetical protein MELLADRAFT_53062 [Melampsora larici-populina
98AG31]
Length = 1067
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 36/197 (18%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
+P +R+FG +G V PYL++P + + + L A+++ +L++
Sbjct: 72 IPQLRIFGITEQGHSVLAHVQDFLPYLWVPAPKD-WQNSDCKDLTAALNSSLSMG----- 125
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKL-------------EDLLLN 192
+ V +++ K ++GY D ++ FLKI L + HM ++ +L
Sbjct: 126 -TKPVHSVTVAHKLSLWGYTGDTKSPFLKISLTDFKHMGRVRRTCTTALLTFCSRELFEI 184
Query: 193 GAV------FNERFQP---YESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLP 241
GA F ++FQP +ES+I Y L+F ID + GM+ IE + RS + +
Sbjct: 185 GAFERGEVNFRDKFQPCTTFESNISYTLRFMIDKKITGMNWIEIPAGTYQLRSPGKQA-- 242
Query: 242 KLSHCQLEADVKAESIV 258
S CQ+E D +++I+
Sbjct: 243 --SKCQIELDTSSDTII 257
>gi|324120702|dbj|BAJ78742.1| DNA polymerase delta catalytic subunit [Isonychia japonica]
Length = 1008
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 32/194 (16%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI------------PFHHEPITETMLQQLAASI 134
VPVIR+FG +G C VHG PY ++ PF + + T++ L ++
Sbjct: 16 VPVIRMFGVTEQGNSVCCHVHGFAPYFFVLVPSNFEEKHCRPF-KDALNRTVMADLRSNP 74
Query: 135 DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG 193
K LG + + KK +YG+ + FLKI + P +SK + +L
Sbjct: 75 HKVSEAVLGAE----------LMKKENIYGFRGTGKVPFLKITVALPEFLSKCKRILEQE 124
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDS--ETSLPKLSH 245
+F + + +E++I + ++F D + G S +E M K R + + LP +S
Sbjct: 125 NIFPALGMQDYSCFETNIDFDIRFMADVEMMGCSWVELPPKMWKPRGTTIGSSQLPVVSR 184
Query: 246 CQLEADVKAESIVV 259
CQ+E DV ESIV
Sbjct: 185 CQIEVDVSWESIVA 198
>gi|324120696|dbj|BAJ78739.1| DNA polymerase delta catalytic subunit [Epiophlebia superstes]
Length = 1007
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 17/187 (9%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL- 142
I VP++R++G +EG C VHG PY ++ H P E A ALN AL
Sbjct: 13 IGPVPIMRMYGVTMEGHSVCCHVHGFSPYFFV---HIP--EAFNNDHCAPFKVALNKALI 67
Query: 143 ----GYKDSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF 196
G +D++ + V + I K ++GY + FL++ L P + + LL ++
Sbjct: 68 ADMRGNRDNLSEAVLAVEIQMKENIFGYRGGNKVPFLRVTLALPKLIPAAKRLLEKEMIY 127
Query: 197 NE----RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE-TSLPKLSHCQLEAD 251
+Q +ES+I + ++F +D NL G S +E K+ ++ P S CQLE D
Sbjct: 128 TALGPHPYQAFESNIDFDIRFMVDTNLVGCSWVELPPQKWSIRTKGGGKPIQSRCQLEVD 187
Query: 252 VKAESIV 258
V E ++
Sbjct: 188 VSWEEMI 194
>gi|405951999|gb|EKC19859.1| DNA polymerase delta catalytic subunit [Crassostrea gigas]
Length = 1090
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYK 145
VPVIR++G + G +HG PY ++P + +Q +D + L +
Sbjct: 101 VPVIRMYGVTLNGNSVLAHIHGFAPYFFVP-AQQGFKREHCEQFRKHLDSVVRGDLRSNR 159
Query: 146 DSVQ-HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG----AVFNER 199
+ +Q V + K +YGYH +++ FLKI + P ++ + LL G +
Sbjct: 160 EEIQTAVLAVDFVMKESIYGYHGNKKIPFLKITVAIPRLIAPAKRLLEQGFTCPGYSSNG 219
Query: 200 FQPYESHIPYIL--QFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAE 255
FQ YES+I + + +F +D ++ G S IE K+ R+ + P S CQ+E DV E
Sbjct: 220 FQAYESNIDFEVRQEFMVDTDVVGCSWIEIPAGKYRIRTKDDPKFPVKSRCQMEVDVSWE 279
Query: 256 SIV 258
+
Sbjct: 280 DFI 282
>gi|322801992|gb|EFZ22529.1| hypothetical protein SINV_03834 [Solenopsis invicta]
Length = 1072
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPITETMLQQLAASIDK 136
I VP++R++G +G C VHG PYL++ H +P E + Q + +
Sbjct: 83 IGPVPIMRMYGVTEQGNSVCCHVHGFCPYLFVSAPSNFTNNHCKPFKEALNQVVKKDMR- 141
Query: 137 ALNIALGYKDSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG- 193
D++Q + + + K MYGY +++ FLKI + P ++ + LL
Sbjct: 142 ------SNPDNIQDAILAVELVYKQSMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQND 195
Query: 194 --AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLE 249
VFN ++ +ES+I + ++F +D ++ G S IE K R L + CQLE
Sbjct: 196 VYTVFNHHYRAFESNIDFDIRFMVDTSVVGCSWIELPPGKWKLRGQHGHMLELTTRCQLE 255
Query: 250 ADVKAESIVV 259
D+ +S +
Sbjct: 256 VDIAWDSFIA 265
>gi|195442888|ref|XP_002069178.1| GK23632 [Drosophila willistoni]
gi|194165263|gb|EDW80164.1| GK23632 [Drosophila willistoni]
Length = 1093
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 23/181 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPITETMLQQLAASIDKALN 139
VPV+R+FG + G C VHG PY YI H E +++ Q++ A +
Sbjct: 103 VPVVRMFGVTMAGNSVCCHVHGFCPYFYIAAPSSFEDRHCESFQKSLDQKVIADMRSN-- 160
Query: 140 IALGYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN 197
KD+VQ V + + ++ ++GY DE+ ++KI + P ++ LL + +
Sbjct: 161 -----KDNVQEAVLLVELVERLNIHGYQGDEKQRYIKITVTLPRFVAAASRLLKKEIIMS 215
Query: 198 E-RFQ---PYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEAD 251
E FQ +E++I + ++F +D + G + IE + RS S LP+ S CQ+E D
Sbjct: 216 EIDFQDCRAFENNIDFDIRFMVDTGVVGCNWIELPKGEWRLRSASSKPLPE-SRCQIEVD 274
Query: 252 V 252
+
Sbjct: 275 I 275
>gi|328720536|ref|XP_001948892.2| PREDICTED: DNA polymerase delta catalytic subunit-like
[Acyrthosiphon pisum]
Length = 1093
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI----PFHHEPITETMLQQLAASIDKALNIAL 142
VP+ R+FG ++G C VHG PY Y F E E +L A + L+
Sbjct: 108 VPITRMFGITMDGNSVCCNVHGYSPYFYTNAPEGFGPEHCKE-FKTRLNAVV---LSDMR 163
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF---- 196
G ++ VQ V + I +K +YGYH +E +LKI + P + + LL V
Sbjct: 164 GNQNRVQEPVLMVEIVQKINLYGYHGEELEKYLKITMALPKLVPAAKRLLEKEPVLPTFS 223
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADVKAE 255
++ +E+++ Y ++F +D + G S IE + DS + L S CQLE DV +
Sbjct: 224 GHNYRMFETNVDYDMRFMVDLKIVGCSWIELPAGSYTVRDSNSRLKGHSRCQLEVDVGWQ 283
Query: 256 SIVV 259
++
Sbjct: 284 KMIA 287
>gi|342182635|emb|CCC92114.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 730
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 107/270 (39%), Gaps = 56/270 (20%)
Query: 77 SELRNLVIQKVPVIRVFG-----NNVEGK-----------------KTCVFVHGVFPYLY 114
S L N V K P + +FG EG+ C VHG +PY +
Sbjct: 25 SPLFNRVSYKCPTLHIFGYVRPREGAEGRVSGSLSGEQMQDKLQQYSACAHVHGTYPYFF 84
Query: 115 IPFHHEPITE----TMLQQLAASI----DKALNIALGYKDSVQHVFHISICKKFPMYGYH 166
+ H I+ T L+ +A+ D + + Q + H+ + FP YG+
Sbjct: 85 VQRHDSRISAVQFGTQLEAVASKTVKHRDSQSALKRDFHGEKQLIHHVEVVWLFPFYGFS 144
Query: 167 ADERTFLKILLYEPYHMSKLEDLL-LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI 225
A + F K+ + +P + L LL V + E H + QF +DY GM+
Sbjct: 145 AKRQPFFKVYVIDPATVPSLLQLLYCTKEVGGREWLVCEGHSSFHFQFMVDYGAKGMAPF 204
Query: 226 ------------------EFNMVKFRSDSETSLPKLSHCQLEADVKAESIV---VDMAAN 264
+ + R++ ET P+LS Q+E DV A S+ ++ A
Sbjct: 205 LIPSCVARGPLPVELKWDQLGITSIRNEDET--PRLSCAQIEVDVVASSLRLRNTNIEAG 262
Query: 265 DSDVATSGGITRYLSDVLLNS--MRAILLG 292
++ +A + +Y SD ++S +R L G
Sbjct: 263 ENILAARRNVLQYFSDFGVDSAALRGCLSG 292
>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
Length = 1000
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIAL 142
I VP++R+FG +E C VHG PY Y+ E E +L ++++KA LN
Sbjct: 13 IAPVPIMRMFGITMERYSVCCHVHGFTPYFYVSV-PESFKEETCHKLKSTLNKAILNDLR 71
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFNERF 200
K+S++ V +++ + + Y D E T+ +I + P ++ + L+ +
Sbjct: 72 SNKESIREAVLQVTLFQAKSLMNYTGDKENTYARIAVALPRLIAAAKRLIEKTPLEFHLM 131
Query: 201 QP--YESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETS-LPKLSHCQLEADVKAES 256
P YES+I + ++F +D + G S IE K+R DS + L LS CQ+E DV
Sbjct: 132 DPSFYESNIDFDIRFMVDTTVVGCSWIELPAGKWRIRDSNIAPLKPLSRCQIEVDVAWNG 191
Query: 257 IVVDMAAND 265
+ D
Sbjct: 192 FIAHQPEGD 200
>gi|358335780|dbj|GAA54399.1| DNA polymerase delta subunit 1 [Clonorchis sinensis]
Length = 1128
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 28/200 (14%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK- 145
VP++R+FG +G C VHG PY Y+P + + + L +++ AL K
Sbjct: 108 VPIVRLFGITQKGNSVCAHVHGFVPYFYVPAPKD-FSVSHLGTFREALNAALLKDARTKE 166
Query: 146 -DSVQHVFHISIC-KKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNE-RFQ 201
D ++H+ + C +K +YGYH + FLK+ + P +S + +L NG F E FQ
Sbjct: 167 FDGLKHLVLMVDCEQKQNIYGYHGKRKLPFLKVTVALPRIISAAKRILENGFAFGEYSFQ 226
Query: 202 PY---ESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETS----------------- 239
Y E++I + ++F +D + G +E + R SE +
Sbjct: 227 SYPAFEANIDFEIRFMVDTEITGCCWVEAPPGSYRLRDSSEANDHKVWGSSSIQKTHPNL 286
Query: 240 LPKLSHCQLEADVKAESIVV 259
P S CQ+E D+ ++++
Sbjct: 287 APAQSRCQIEFDIAWDALIA 306
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 35 VPVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
VP++R+FG +G C VHG PY Y+P
Sbjct: 108 VPIVRLFGITQKGNSVCAHVHGFVPYFYVP 137
>gi|324120742|dbj|BAJ78762.1| DNA polymerase delta catalytic subunit [Uroleucon
nigrotuberculatum]
Length = 1093
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI----PFHHEPITETMLQQLAASIDKALNIAL 142
VP+ R+FG ++G C VHG PY Y F E E +L A + L+
Sbjct: 108 VPITRMFGITMDGNSVCCNVHGYSPYFYTNAPEGFGPEHCKE-FKTRLNAVV---LSDMR 163
Query: 143 GYKDSVQH-VFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF---- 196
G ++ VQ V + I +K +YGYH +E +LKI + P + + LL V
Sbjct: 164 GNQNKVQEPVLMVEIVQKINLYGYHGEELEKYLKITMALPKLVPAAKRLLEKETVLPTFS 223
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADVKAE 255
++ +E+++ Y ++F +D + G S IE + DS + + S CQLE DV +
Sbjct: 224 GHNYRMFETNVDYDMRFMVDLKIVGCSWIELPAGTYAIRDSNSRVKSHSRCQLEVDVGWQ 283
Query: 256 SIVV 259
++
Sbjct: 284 KMIA 287
>gi|344231485|gb|EGV63367.1| DNA/RNA polymerase [Candida tenuis ATCC 10573]
Length = 1457
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 40/192 (20%)
Query: 82 LVIQKVPVIRVFG------NNVE-GKKTCVFVHGVFPYLYIPFHHE------------PI 122
L + +VPVIRV+G N+V+ G + +H V+PY+Y+ +E +
Sbjct: 28 LQVAQVPVIRVYGALVFIHNSVKYGYNALLHIHNVYPYVYVSCDYEFVKSLPEITHLGHV 87
Query: 123 TETMLQQLAASI--------------DKALNIALGYKDSVQHVFHISICKKFPMYGYHAD 168
T + +AAS L+I + + +S+CK P+YGY
Sbjct: 88 TSYLEAFMAASAWQKKKQPEEEDEQQSNELDITQLKSGKRRFIAKVSLCKGVPIYGYRVG 147
Query: 169 ERTFLKILLYEPYHMSKLEDLLLNGAV----FNE---RFQPYESHIPYILQFCIDYNLYG 221
R F KI P + ++ +L V F++ +F+ YESHIPY+ QF DYNL+
Sbjct: 148 YRLFYKINFLSPLYKARFTNLFNGKQVDMKQFSKSKFKFEIYESHIPYLSQFLSDYNLFS 207
Query: 222 MSNIEFNMVKFR 233
+ + F +R
Sbjct: 208 CNWLNFKNCYYR 219
>gi|324120756|dbj|BAJ78769.1| DNA polymerase delta catalytic subunit [Stichotrema asahinai]
Length = 1050
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP++R+FG+ G C VHG +PY I + E ++ + +K LN A+
Sbjct: 66 VPIMRMFGSTKSGNSVCCHVHGFYPYFMIKLPNNFQPEHII-----AFEKKLNEAVICDM 120
Query: 143 --GYKDSVQHVFHISICKKFPMYGYH-ADERTFLKILLYEPYHMSK----LEDLLLNGAV 195
++ V+ V I I +YGY A + F KI + P ++ LE + ++ +
Sbjct: 121 RSNKENIVKAVMGIEIIMGQSLYGYSGATKSKFAKISVVLPKLIAPAKRLLESINIHPLI 180
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
+ YE+++ ++F ID +YG IE K+ SET +++CQ+E DV
Sbjct: 181 NSSAVTSYEANVDIEMRFMIDKKIYGCCWIELVANKWEIRSETGRKPITNCQIEVDVDVN 240
Query: 256 SIVVDMAAND-SDVA 269
+ N+ SDVA
Sbjct: 241 DFIAHEPDNEWSDVA 255
>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1084
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 20/197 (10%)
Query: 64 PFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT 123
P T + V++E N Q PVIRV+G N G + VHG PY Y
Sbjct: 80 PLQFRTETGSKVYAEKSN---QLFPVIRVYGVNATGNSVVLHVHGFMPYFYA-----ACP 131
Query: 124 ETMLQQLAASIDKALNIAL--GYKDSVQHVFHISICKKF-PMYGYHAD-ERTFLKILLYE 179
E + + +ALN L K + + + + +YG+ D T K+ +
Sbjct: 132 ENFDYEKCGQVRQALNKTLESTMKSGPPPIIGLEVVRNLKSIYGFQFDFSMTVWKVYVSM 191
Query: 180 PYHMSKLEDLLLNGAVFN--ERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSD 235
P + K+ LL NG +Q YES++P++L+F ID ++G + ++ M RS
Sbjct: 192 PAFVPKVRSLLENGISLPGFRSYQTYESNVPFLLRFMIDKEIHGCNWLQAPKGMYSIRSA 251
Query: 236 SETSLPKLSHCQLEADV 252
++ K S CQLE D+
Sbjct: 252 ND----KQSSCQLELDI 264
>gi|313247101|emb|CBY35929.1| unnamed protein product [Oikopleura dioica]
Length = 852
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGY 144
P IR++G + +G C+FV G PY Y P E +++L + A+ +
Sbjct: 77 PTIRIYGTDKKGSSVCLFVKGFQPYFYTPAPDGFSEDYCGQFVRELNERVLGAMRGGM-L 135
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-------AVF 196
K + V H IC K +YGY++ + F+K+ + M+ ++++ G F
Sbjct: 136 KGISKAVLHAEICSKENIYGYNSKGKIPFIKVTVASWQVMTPCKNVMEPGWKVTTDNGQF 195
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+ F YESHI Y ++F +D + G S I +F + K + C +EA+V
Sbjct: 196 HHNFSMYESHIDYEIRFMVDCKVRGASWITVPKGQFHE----RMRKETTCSIEAEVDYAD 251
Query: 257 IV 258
I+
Sbjct: 252 II 253
>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
Length = 1033
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP++R++G +EG C VHG PY ++ + +++KA L K
Sbjct: 52 VPIMRMYGVTMEGNSVCCHVHGFSPYFFVSAPSN-FANSDCHPFKMALNKAVLADMRSNK 110
Query: 146 DSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF----NER 199
++V+ V + + ++ + GY+ + + F+KI L P ++ + LL A++ +
Sbjct: 111 ETVREAVVAVELVQRLNVMGYNGEAKARFIKITLALPRLIAPAKRLLEREAIYPSAGSHT 170
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
FQ +ES+I + ++F +D L G S +E ++ S +S CQ+EAD+ E +V
Sbjct: 171 FQAFESNIDFDIRFMVDTGLVGCSWVELPAGQWTMQSTQD--HVSRCQIEADISWEKLV 227
>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
MF3/22]
Length = 1062
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQ 149
I++FG +G +HG PY ++P +E L ++K +D+ +
Sbjct: 89 IKLFGVTEDGHSVLARIHGFMPYFFVP-APRGFSEDDLSPFCDYLNK--------QDNAR 139
Query: 150 HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-----AVFNERFQPY 203
V ++ + K+ ++GY D+ F++I P + ++ L NG +FN Y
Sbjct: 140 TVDNVKLAKRKSLWGYRGDDWVPFIRITATHPGFVPRIRGLFDNGECSYNGLFNGIVTTY 199
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
ES+IPYIL+F ID + GM+ IE K++ S K S CQLE
Sbjct: 200 ESNIPYILRFMIDTKVVGMNWIEVPAGKYQLLSGEK--KHSCCQLE 243
>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
Length = 1092
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIAL-G 143
VPV+R+FG +EG C VHG PY YI P + E E +L ++ K + +
Sbjct: 106 VPVVRMFGVTMEGNSVCCHVHGFCPYFYIVAPSNFE---ERHCAELHEALGKKVIADMRS 162
Query: 144 YKDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFN---- 197
KD+VQ V + + ++ ++GY D ++T++KI + P ++ LL + +
Sbjct: 163 NKDNVQEAVLAVELVQRLNIHGYQGDAKQTYIKITVTLPRFVAAASRLLKTTIIMSSFDF 222
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADVKAES 256
+ + +E++I + ++F +D + G + IE +R S P S CQLE DV +
Sbjct: 223 QDCRAFENNIDFDIRFMVDTQVVGCNWIELPPGVWRLRGRNSKPAPESRCQLEVDVAYDQ 282
Query: 257 IV 258
+
Sbjct: 283 FI 284
>gi|307167251|gb|EFN60939.1| DNA polymerase delta catalytic subunit [Camponotus floridanus]
Length = 1092
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPITETMLQQLAASIDKALN 139
VP++R+FG G C VHG PYL++ H +P E + Q A D N
Sbjct: 106 VPIMRMFGVTERGNSICCHVHGFCPYLFVSAPPNFTNNHCKPFKEALNQ--AVKKDMKSN 163
Query: 140 IALGYKDSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-- 195
D++Q + + + K +YGY +++ FLKI + P ++ + LL V
Sbjct: 164 -----PDNIQEAILAVELVYKQSIYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYT 218
Query: 196 -FNERFQPYESHIPYILQFCIDYNLYGMSNIEFN--MVKFRSDSETSLPKLSHCQLEADV 252
FN ++ +ES+I + ++F +D ++ G S IE + K R L + CQLE DV
Sbjct: 219 IFNYHYRAFESNIDFDIRFMVDTSVVGCSWIELSPKSWKLRGQYGHMLELTTRCQLEVDV 278
Query: 253 KAESIVV 259
++ +
Sbjct: 279 AWDNFIA 285
>gi|449018967|dbj|BAM82369.1| DNA polymerase zeta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1996
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 47/196 (23%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF----HHEPITETM-LQQLAASIDKAL- 138
+ +P +R+ G G C+ +H FP Y+P H P E Q+L ++++AL
Sbjct: 44 RSLPAVRIIGRTSAGSTVCLHLHNTFPRTYVPLPETVAHNPEAERRWTQRLRVALERALE 103
Query: 139 NIALGYKDSVQ------------------------------HVFHISICKKFPMYGYHAD 168
+ L +D Q +++ I+I + +YG+ A+
Sbjct: 104 QLHLQQRDQRQAPDANWSANQPGSGAATEAPSSVEDAAADRYIYDITIEWRRCIYGFKAN 163
Query: 169 ERTFLKILLYEPYHMSKLEDLLLNG-----------AVFNERFQPYESHIPYILQFCIDY 217
+ F +I P ++L L +G V R QPYE+H+PY+LQ DY
Sbjct: 164 AQRFARIRYIHPAESARLVQALASGMLAAVDDGTMDPVLPARLQPYEAHLPYVLQVMADY 223
Query: 218 NLYGMSNIEFNMVKFR 233
L G I +FR
Sbjct: 224 GLAGFGCIGLCSGRFR 239
>gi|448085004|ref|XP_004195746.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359377168|emb|CCE85551.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1524
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 52/202 (25%)
Query: 84 IQKVPVIRVFG------NNVEGKKTCVF-----VHGVFPYLYIPFHHE-----------P 121
+QKVP+IR++G N+ +G+ F VH FPY Y+ +
Sbjct: 30 VQKVPIIRIYGTLEIKNNSNDGQAVDYFNVLVHVHNCFPYFYVGVDSKFNDILNEDSAAK 89
Query: 122 ITETMLQQLAASIDKA-------------LNIALGYKDSV-------QHVFHISICKKFP 161
I + +QL+ S + +NI Y ++V +V +S C+ P
Sbjct: 90 ILHYLEEQLSNSFKRNKGTEDLEYEENDDVNIYDDYVNNVDDSGQKRNYVASVSFCRGVP 149
Query: 162 MYGYHADERTFLKILLYEPYHMSKLEDLL----------LNGAVFNERFQPYESHIPYIL 211
+YG+ E F+KI L P S+L +L+ L V YE+HIP++L
Sbjct: 150 IYGFATQETAFIKISLLSPMFKSRLVNLINEKKLNPIDPLRSRVTRSSVLLYEAHIPFLL 209
Query: 212 QFCIDYNLYGMSNIEFNMVKFR 233
QF D+NLY + + + + FR
Sbjct: 210 QFLADFNLYSCNWLAVDKLFFR 231
>gi|324120700|dbj|BAJ78741.1| DNA polymerase delta catalytic subunit [Ephemera japonica]
Length = 1006
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKAL--NIAL 142
VPV+R+FG G CV VHG PY Y +P + E E + +++KA+ ++
Sbjct: 16 VPVVRMFGVTDNGNSVCVHVHGFAPYFYTLVPSNFE---EKHCGKFKDTLNKAVLADMRS 72
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE--- 198
+ V + + K+ +YGY A FL + + P + K + +L + E
Sbjct: 73 NPHQLSEAVLEVRLVKRENIYGYRATGLIPFLMVTVALPDLLPKCKRILEQETILPELGP 132
Query: 199 -RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAE 255
+Q +E++I + ++F + N+ G S +E + R D T L +S CQ+E DV +
Sbjct: 133 QEYQCFETNIDFDIRFMTEVNMMGCSWVELPAGSWVPRGDVGTKLAPISRCQIEVDVAYD 192
Query: 256 SIVV 259
I+
Sbjct: 193 RIIA 196
>gi|428182004|gb|EKX50866.1| hypothetical protein GUITHDRAFT_54961, partial [Guillardia theta
CCMP2712]
Length = 140
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT------ETML 127
++ S +Q+VP++R+FG EG+K CV +H FPYLY+P + + ++ +
Sbjct: 19 VIESRYMGERLQRVPILRIFGITSEGQKACVHLHRAFPYLYVPVLEQWCSLAPAQLDSRI 78
Query: 128 QQLAASID---KALNIA-----------LGYKDSVQHVFHISICKKFPMYGYHADERTFL 173
+QLA S+D K L+ A G + QHV + + P YG H ++ F+
Sbjct: 79 KQLAKSMDMALKELDAASSMDQEREGGDRGRRKPKQHVLKAQVLRGTPFYGCHLSQQLFV 138
Query: 174 KI 175
KI
Sbjct: 139 KI 140
>gi|213406475|ref|XP_002174009.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
gi|212002056|gb|EEB07716.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
Length = 1067
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNI 140
V ++VP IR+FG G V G PY ++ P +P +ML A ++D+A N
Sbjct: 92 VDEQVPTIRMFGVTEAGNSVLTHVTGFLPYFFVKAPPGFQP---SMLNDFAKTLDRACNG 148
Query: 141 ALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLL-LNGAVFNE 198
+ V I K +YG+ +E++ F++I + +P +++ ++ N FN+
Sbjct: 149 GV--------VSRCEIKMKENLYGFQGNEKSPFIQIYISDPKLVTRCRNVFERNELSFND 200
Query: 199 RF----QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
F YES++ Y+++F ID N+ GM+ I K+ + K+S CQ+E
Sbjct: 201 MFPTSVMTYESNLQYLMRFMIDCNVVGMNWIRLPAKKYLLRQQN---KISDCQIE 252
>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKALNIALGY 144
VPV+R++G +G C HG PY + P + + +L ++D AL
Sbjct: 56 VPVVRLYGVTGDGASVCAHCHGFTPYCFSSAPLAFDESDAGNVAKLQQALDGALRQRCSR 115
Query: 145 ---KDSVQHVFHISICK-KFPMYGYHAD--ERTFLKILLYEPYHMSKLEDLLLNG----A 194
+ Q V + + + K + GY D F KI + P + L+ +L +G
Sbjct: 116 GQDRACAQLVLGVEVVRDKRSIMGYQPDGARACFFKIYVALPTQIPALKKVLQDGVNVPG 175
Query: 195 VFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKA 254
V + + Q +ES++P+IL+F ID + G + +E + + S + K + C LE DV
Sbjct: 176 VGHSQLQTFESNVPFILRFMIDNEIQGCNWVEAPAGAYAARSGGA--KKTRCDLEIDVVF 233
Query: 255 ESIV 258
+S+V
Sbjct: 234 DSLV 237
>gi|324120684|dbj|BAJ78733.1| DNA polymerase delta catalytic subunit [Lepidocampa weberi]
Length = 1096
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 81 NLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL-- 138
L + VP++R++G +G C VHG PY Y+ + T + +++A+
Sbjct: 104 GLKVGSVPIVRLYGVTKQGNSICCHVHGFTPYFYV-LLPDNFDNTHIPDFKDCLNRAMLN 162
Query: 139 NIALGYKDSVQHVFHISIC-KKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
++ G D + + + IC K+ MY + FL+I + P ++ + LL G
Sbjct: 163 DLRRGKDDIPEPIISMEICDKQSIMYYQGSSVAKFLRIKVALPRLIAGTKRLLEKGDGVP 222
Query: 198 ER-----FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQLE 249
++ F+P+E++I + +F +D +L G + +E +R ++ + +S CQLE
Sbjct: 223 QQFRQHIFRPFEANIDFETRFMVDKDLVGCAWVEIPKKAWRRRTQEGVGDGRCISRCQLE 282
Query: 250 ADVKAESIV 258
DV E ++
Sbjct: 283 IDVSHERLI 291
>gi|324120752|dbj|BAJ78767.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1005
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKALNIAL-- 142
VPVIR++G +EG VHG PY Y +P E A++ ALN +
Sbjct: 16 VPVIRMYGTTMEGHSVLCHVHGFSPYFYALLPQGFE-------NSHCATLKNALNKIMLS 68
Query: 143 ---GYKDSVQH-VFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGA--- 194
G + V+ V +SI + + GY D+ F I + P ++ L+ N A
Sbjct: 69 DMRGNSEKVEECVLEVSIVECRSLQGYSGDDLSKFALIRVALPRLVAMGARLMENNAHSF 128
Query: 195 --VFNERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSE-TSLPKLSHCQLE 249
+FN ++ +ES++ + ++F +D N+ G IE N + R+ SE LP+ S C E
Sbjct: 129 FNLFNHTYRAFESNVDFDIRFMVDTNIVGCCWIELPANKWRLRNSSEHADLPRTSRCDYE 188
Query: 250 ADVKAESIVV 259
D+ ++ V
Sbjct: 189 VDIAWDAFVA 198
>gi|328865112|gb|EGG13498.1| DNA polymerase delta catalytic subunit [Dictyostelium fasciculatum]
Length = 1801
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VPV+R+FG G VHG PY +I T ++ ++D+ + +
Sbjct: 823 VPVVRLFGITKTGNSVLCKVHGFLPYFFIAC-PPGFTVRDCKEFRETLDEVMFRYTTNNN 881
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN-------- 197
+ I I KK + GY+ + + F+KI L P +++K D+L NG +
Sbjct: 882 VENIILGIEIVKKKSILGYNPNPLSDFIKITLAMPRYVTKCRDILENGMRYGYNVPTQEI 941
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+Q +ES+IP+ L+F ID + G S +E + + S K+S CQ+E D
Sbjct: 942 RVYQTFESNIPFALRFLIDKKVPGCSWVELPAGGY----QISQNKVSTCQIEVDT 992
>gi|58260420|ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229701|gb|AAW46103.1| delta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1058
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P +R+FG N G V+G PY Y+ + + LQ LA I+ +++ ALG
Sbjct: 83 PTLRLFGVNKSGNSVLAHVYGFKPYFYVAAPSGFLNKD-LQPLADKINSSIS-ALG---- 136
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQP--- 202
V + +I + ++GY D+ F+KI + +P ++SK++ G + FN F P
Sbjct: 137 -PCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDPKNLSKVKGAFERGQIDFNGLFPPEIL 195
Query: 203 -YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
YES+I Y ++F ID + GM+ + ++ R D K S CQ+E
Sbjct: 196 TYESNIAYTMRFMIDTKIVGMNWV--SIPGGRYDLLEGGSKKSQCQIE 241
>gi|313225943|emb|CBY21086.1| unnamed protein product [Oikopleura dioica]
Length = 1062
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH---EPITETMLQQLAASIDKALNIALGY 144
P IR++G + +G C+FV G PY Y P + E +++L + A+ +
Sbjct: 77 PTIRIYGTDKKGSSVCLFVKGFQPYFYTPAPNGFSEDYCGQFVRELNERVLGAMRGGM-L 135
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-------AVF 196
K + V H +C K +YGY++ + F+K+ + M+ ++++ G F
Sbjct: 136 KGISKAVLHAEMCSKENIYGYNSKGKIPFIKVTVASWQVMTPCKNVMEPGWKVTTDNGQF 195
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+ F YESHI Y ++F +D + G S I +F + K + C +EA+V
Sbjct: 196 HHNFSMYESHIDYEVRFMVDCKVRGASWITVPKGQFHE----RMRKETTCSIEAEVDYAD 251
Query: 257 IV 258
I+
Sbjct: 252 II 253
>gi|321264115|ref|XP_003196775.1| delta DNA polymerase [Cryptococcus gattii WM276]
gi|317463252|gb|ADV24988.1| Delta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1049
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 23/193 (11%)
Query: 63 IPFHHEPITETIVHSELRNLVIQK-VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP 121
+PF E T + E+ K P +R+FG N G VHG PY Y+
Sbjct: 57 LPFDAEKETISFQQIEIEESTDPKHGPTLRLFGVNKSGNSVLAHVHGFKPYFYVAAPSGF 116
Query: 122 ITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEP 180
+ + LQ LA +I+ +++ A+G V + +I + ++GY D+ F+KI + +P
Sbjct: 117 LNKD-LQPLADAINSSIS-AMG-----PCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDP 169
Query: 181 YHMSKLEDLLLNGAVFNERFQP----YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
+SK++ FN F P YES+I Y ++F ID + GM+ + ++ R D
Sbjct: 170 RSLSKID--------FNGLFPPEILTYESNIAYTMRFMIDTKIVGMNWV--SIPGGRYDL 219
Query: 237 ETSLPKLSHCQLE 249
K SHCQ E
Sbjct: 220 LEGGNKKSHCQTE 232
>gi|294655851|ref|XP_458050.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
gi|199430655|emb|CAG86117.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
Length = 1588
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 71 TETIVHSELRNLVIQKVPVIRVFG-------------NNVEGKKT-------------CV 104
T T +L N V+Q VP+IR+FG +N K + V
Sbjct: 18 THTSKLDQLYNDVVQ-VPIIRIFGSLSVGIDDGDERSDNDHTKHSGSNKPVKFLSYNVLV 76
Query: 105 FVHGVFPYLYIP-FHHEPI--TETMLQQLAASIDKALNIALGYKDSV------------- 148
VH +PYLY+ F +E + +E + QL ++ +L + K
Sbjct: 77 HVHNYYPYLYVDCFENEALLRSENYINQLVEYLENSLQQSFRRKKGEEEEEEEETIDVDV 136
Query: 149 -------QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL----LNGAVFN 197
+ + ++ICK P+YGY + F KI L P + ++L L +N F+
Sbjct: 137 DSGGGERKFIAKVAICKGSPIYGYQVGYKLFYKISLLSPLYKTRLTTLFHDKNINICEFS 196
Query: 198 ERFQP----------YESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
F YE+HIPY+LQF D+NL+G +E + FR
Sbjct: 197 SSFDKGTKKSYAVNVYEAHIPYLLQFLADFNLFGCGWLEIDNTYFR 242
>gi|156407049|ref|XP_001641357.1| predicted protein [Nematostella vectensis]
gi|156228495|gb|EDO49294.1| predicted protein [Nematostella vectensis]
Length = 1092
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP+IR+FG ++G +HG PY ++P E ++DKA LN +
Sbjct: 101 VPIIRMFGVTMDGNSVLCHIHGFVPYFFVP-APPGFQEIHCSLFRDTLDKAVLNDMRSNR 159
Query: 146 DSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG---AVFNER- 199
D V Q V + + +YGYH + + FLK+ + ++ + +L G + ER
Sbjct: 160 DGVTQAVLAVDYMMRESIYGYHKNTKIPFLKVTVALQKLIAPAKRILETGFRCGHYPERG 219
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--------SDSETSLPKLSHCQLEAD 251
+ YES+I Y ++F +D ++ G + IE K+R S +S S CQLE D
Sbjct: 220 YSTYESNIDYEVRFMVDSDIVGCNWIELPAGKYRVRTPNGIASRYRSSAKPESRCQLEVD 279
Query: 252 VKAESIV 258
V + ++
Sbjct: 280 VAWDELI 286
>gi|134117391|ref|XP_772922.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255540|gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 16/169 (9%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P +R+FG N G V+G PY Y+ + + LQ LA I+ +++ ALG
Sbjct: 83 PTLRLFGVNKSGNSVLAHVYGFKPYFYVAAPSGFLNKD-LQPLADKINSSIS-ALG---- 136
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLED--LLLNGAVFNERFQP-- 202
V + +I + ++GY D+ F+KI + +P ++SK++D L+ FN F P
Sbjct: 137 -PCVTNCAIFNRRSLWGYRGDDTVPFIKITVSDPKNLSKVKDEFFTLSTIDFNGLFPPEI 195
Query: 203 --YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
YES+I Y ++F ID + GM+ + ++ R D K S CQ+E
Sbjct: 196 LTYESNIAYTMRFMIDTKIVGMNWV--SIPGGRYDLLEGGSKKSQCQIE 242
>gi|302848185|ref|XP_002955625.1| hypothetical protein VOLCADRAFT_66109 [Volvox carteri f.
nagariensis]
gi|300259034|gb|EFJ43265.1| hypothetical protein VOLCADRAFT_66109 [Volvox carteri f.
nagariensis]
Length = 117
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 4 MNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+ IV+ID++M+ PI H D S L + VPVIR+FG G+K C+ VH FPY Y+
Sbjct: 2 IQIVSIDYYMAPPIPHIDYCFSSLEGTTVDLVPVIRIFGATPAGQKACIHVHRAFPYFYV 61
Query: 64 PF 65
P+
Sbjct: 62 PY 63
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 77 SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE-PITETMLQQLAASID 135
S L + VPVIR+FG G+K C+ VH FPY Y+P+ P T
Sbjct: 23 SSLEGTTVDLVPVIRIFGATPAGQKACIHVHRAFPYFYVPYDDSLPSTPQEGNGGGNGGS 82
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILL 177
A Q V + + + P YGY DE+ ++K++L
Sbjct: 83 SA-------SKQRQVVHALQLVRGKPFYGYLMDEQLYIKVVL 117
>gi|302850307|ref|XP_002956681.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f.
nagariensis]
gi|300258042|gb|EFJ42283.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f.
nagariensis]
Length = 991
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
VIR++G N G C FVHG PY YI P + ++Q +I + LN+ L
Sbjct: 1 VIRMYGVNAAGNSVCAFVHGFEPYFYI--EASPSWDRDVRQ---AIGEQLNVRLRLFSKT 55
Query: 149 QH---VFHISICKKFPMYGYHADE--RTFLKILLYEPYHMSKLEDLLLNGAVFNE----- 198
+ V I +C+K ++ Y + R+FLKI++ P ++ L G
Sbjct: 56 KGGPAVIRIELCQKASIWNYQGPDAKRSFLKIVVSVPNLVAPARGLFEGGLHIKSVGEYI 115
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+ +ES++ Y L+F +D + G + IE + +L+HCQ+EA V
Sbjct: 116 KCTTFESNVLYTLRFMVDTKVVGGNWIELPAGTYFLQRNQ---QLTHCQIEAHV 166
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena
thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
+N I + PV R++GN+ +G C+ +HGV ++ + + + + + +
Sbjct: 81 KNRKILQAPVARMYGNDKQGNSVCLHIHGVNQISHLIQNDKTFLDKFIDLIEECYYTLYS 140
Query: 140 IALGYK----DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
++ K + + + I K +YGYH+ E FLKI Y P + KL +L +G V
Sbjct: 141 VSEKQKKFLMSTTPIILNYEIIYKKDIYGYHSTEEPFLKIYFYNPKMIKKLVGILESGVV 200
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLS 244
N F YE H+ + L+ D ++ G+ I+ R + +L +L+
Sbjct: 201 MNIEFVIYEGHLTHFLKLYSDLDIKGLREIKLLKYSLRKNENQALQQLT 249
>gi|66809121|ref|XP_638283.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum
AX4]
gi|74853854|sp|Q54N97.1|DPOD1_DICDI RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|60466714|gb|EAL64765.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum
AX4]
Length = 1104
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI---PFHHEPITETMLQQLAASIDKALNIALG 143
+P IR+FG EG VHG PY +I P E +++ L S+ + N +
Sbjct: 127 LPAIRLFGVTKEGNSVLCKVHGFLPYFFISCPPGFTEADCKSLKHDLNESMKMSSNQS-N 185
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLL--------LNGA 194
KD V I I KK + GY+ + + F++I L P +++ ++ + G
Sbjct: 186 EKDIENIVVSIDIEKKKSIMGYNPNPLSDFIRITLILPKFVTRCREIFESGRHHFTIPGQ 245
Query: 195 VFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKA 254
F + +Q YES+I + L+F ID + G S IE ++ SET +S CQ+E D
Sbjct: 246 PFRQ-YQTYESNILFALRFLIDKGITGCSWIELPANTYKL-SETP---VSTCQIEVDTSL 300
Query: 255 ESIVVDMAANDS 266
E+I + ++ +DS
Sbjct: 301 ETI-ISLSDDDS 311
>gi|384248668|gb|EIE22151.1| DNA polymerase delta subunit one [Coccomyxa subellipsoidea C-169]
Length = 1116
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEP-ITETMLQQLAA 132
+ +L + +VP++R++G G C +VHG PY YI P P +++ QL
Sbjct: 100 NQQLYRTDLSEVPILRMYGVTEHGNSVCTYVHGFEPYFYIEAPRSFGPDDCDSLCAQLNV 159
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLL 191
+ I + +++ +K + Y + RTFL+I + P +++ +L
Sbjct: 160 RFHRICAIP-------KFCLGVAMVQKQTIMHYQPQKSRTFLRITVATPNLVTQARGMLE 212
Query: 192 NGAVFNE-----RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHC 246
+G + F YESH+ + L+F ID ++ G + +E + + K SHC
Sbjct: 213 HGINVDSLQRHMAFMTYESHVLFALRFMIDCDIVGGNWVELKAGAYSLLNLEDPRKQSHC 272
Query: 247 QLEADVKAESIVVDMAAND 265
QLEA V +I+ A D
Sbjct: 273 QLEAHVHFSNIISHPAEGD 291
>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
Length = 1060
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P IR+ G +G V G PYLYI ++ LN G +
Sbjct: 85 PFIRMHGVTQDGYSVMANVTGFLPYLYIA-----APRGFTKEECEGFSGYLNATFG-NNG 138
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-----FNERFQ 201
+ V + + K ++GY DE++ F+KI + M+++ G + F++ Q
Sbjct: 139 KRIVADMEMHTKRSLWGYKGDEKSPFIKITFVDQRSMTRVRGCFERGEIHFREFFDDAIQ 198
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
YES+I Y L+F ID + GMS IE + + TS K+S QLE D+ + I+
Sbjct: 199 TYESNISYDLRFMIDKKVVGMSWIECPGGAYNLKASTS--KVSKAQLEFDIHHKDIIAHP 256
Query: 262 AAND 265
A +
Sbjct: 257 AEGE 260
>gi|449547887|gb|EMD38854.1| hypothetical protein CERSUDRAFT_112578 [Ceriporiopsis subvermispora
B]
Length = 1085
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQ 149
+R+FG EG ++V PY Y+ + A L + +
Sbjct: 112 LRMFGVTEEGNSVLMYVKDFLPYFYVAAPRGFTKDDTF---------AFEQYLNREGNGG 162
Query: 150 HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-----AVFNERFQPY 203
V H+ + + ++GY D+ F+KI+L P + K+ L +G +F + Y
Sbjct: 163 VVRHVELVSRRSLWGYRGDDYVPFIKIVLDTPRSLPKVRGLFESGKCTFRGLFGDNVSTY 222
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
ES+I Y+L+F ID + GM+ IE + + T K SHCQLE V+ + +
Sbjct: 223 ESNIAYLLRFMIDTKVVGMNWIEVPAGNY--EVLTGNKKRSHCQLEMVVRWDKFI 275
>gi|407394209|gb|EKF26846.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 980
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHI 207
Q + H+ + ++ P YGYH R+F ++ + +P + +L LL + V R+Q YESH
Sbjct: 39 QLLHHVELVRRLPFYGYHERSRSFFRVSVIDPAMVGRLVRLLGHTTEVGGRRWQTYESHA 98
Query: 208 PYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP--------------------KLSHCQ 247
PY QF +DY + GM+ RS L +L+ +
Sbjct: 99 PYHFQFMVDYGMKGMAPFFIPTCTARSPISNELQDLHAQARLKITAVTSKGEPMRLTRAE 158
Query: 248 LEADVKAESI 257
LE DVKA ++
Sbjct: 159 LEIDVKASAL 168
>gi|168003912|ref|XP_001754656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694277|gb|EDQ80626.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1156
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID 135
H EL V+R+FG EG C VHG PY YI + I + +L ++++
Sbjct: 100 HKELCPYRSGPAAVLRMFGVTQEGNSVCCNVHGFEPYFYISC-VDGIGPDDVPKLRSTLE 158
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG- 193
+ A S V I + +K + Y + R+FLKI + P ++ +L G
Sbjct: 159 TRMREANRNSKSQTFVTKIEVVQKRSVMYYQVQKARSFLKIFVGLPTMVAGCRGILEKGI 218
Query: 194 ---AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ F YES++ + L+F ID ++ G + +E + ++ S +LS+CQLE
Sbjct: 219 NIDGIGQRCFLTYESNVLFALRFMIDCDIAGGNWVELPVGAYQKSSR----QLSYCQLEL 274
Query: 251 DVKAESIV 258
D+ IV
Sbjct: 275 DIHYSKIV 282
>gi|324120706|dbj|BAJ78744.1| DNA polymerase delta catalytic subunit [Aposthonia japonica]
Length = 1088
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYK 145
VP++R++G +EG C +HG PY ++ + T + Q ++++++ + +
Sbjct: 110 VPIMRMYGITMEGNSVCAHIHGFSPYFHV-LAPDDFTNSHCQPFKDALNRSILADMRSNR 168
Query: 146 DSVQH-VFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSK----LEDLLLNGAVFNER 199
D VQ V + + KK ++GY D FLKI + P ++ LE ++ A +
Sbjct: 169 DGVQEAVLAVELVKKQNIFGYRGDALSNFLKITVTLPTLIAPGKRLLEKEVMLPAFSSHT 228
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAESI 257
FQ +E++I + ++F +D + G S +E M R ++ S CQLE ++ + +
Sbjct: 229 FQAFETNIDFDIRFMVDTQIVGCSWVELPSRMWTIREKAQHQ----SRCQLEVNIAWDRL 284
Query: 258 VV 259
+
Sbjct: 285 IT 286
>gi|403360889|gb|EJY80140.1| DNA polymerase delta catalytic subunit [Oxytricha trifallax]
Length = 870
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGY 144
P IR++G +G VH PY Y+ H T LQ++ + ++ +
Sbjct: 73 PHIRMYGVTAQGNSVLCHVHNFDPYFYVEVDSKKHPNFTPEDLQKIKSDLN-------NW 125
Query: 145 KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQ--- 201
+ V + + +K + GY F+KI P ++ +L L NG+ Q
Sbjct: 126 NKQEECVKLVELVQKNSIMGYLEKSGLFIKIYCSLPKYVQQLRSLFENGSFTLRGSQCFS 185
Query: 202 --PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
YES++ Y L+F ID+ + GM I K+R + T K+S CQLE DV+ + ++
Sbjct: 186 HITYESNLSYSLRFMIDHQIVGMQWIRIEAGKYRKRTGT---KMSSCQLEIDVEDPNDII 242
Query: 260 DM 261
+
Sbjct: 243 GL 244
>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
Length = 1046
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
+ VPV+R++G ++G VHG PY Y+ + E+ +++K L
Sbjct: 58 TVGSVPVMRMYGVTMDGFNVLCHVHGFTPYFYVTLP-DAFNESDCLPFKKALNKTLCTDS 116
Query: 143 GYKDSV-QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFNE-- 198
+S V + I +K + GY ++ F I + +P +S L N V++
Sbjct: 117 SENNSTPDSVLEVQIVRKKCLQGYKGEKNEKFAMIRVAQPKLISASVRQLENSRVYDAYP 176
Query: 199 --RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKA 254
++PYES++ + ++F +D N+ G IE N K RSD + K S C E DV
Sbjct: 177 DHDYRPYESNVDFDIRFMVDMNIKGCCWIELPANKWKLRSD----MSKSSTCHYEVDVAF 232
Query: 255 ESIVV 259
+S V
Sbjct: 233 DSFVA 237
>gi|343428135|emb|CBQ71665.1| probable DNA polymerase delta catalytic subunit [Sporisorium
reilianum SRZ2]
Length = 1057
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 59 PYLY-IPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF 117
PYL + H+ +T + E V Q P IR++G VEG C +HG PY YI
Sbjct: 57 PYLEPLDVDHDHVTFQQIDIEEHQAVGQP-PAIRMYGVTVEGHSVCAHIHGFLPYFYI-- 113
Query: 118 HHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADER-TFLKIL 176
H P LN+ G + V I K + GY E F+K+
Sbjct: 114 -HAP--RGFTANTCNDFTNHLNVLFGGR----SVHKSEIVSKKSLMGYAGQENVAFIKLT 166
Query: 177 LYEPYHMSKLEDLLLNGAV-FNERFQPYES-----HIPYILQFCIDYNLYGMSNIEFNMV 230
+ + + ++ G + F + F P ++ +I Y L+F ID + GM+ I
Sbjct: 167 ISDLRSLPRIRGSFERGEIGFRDLFTPGDASLTYENITYTLRFMIDLKIVGMNWIRVQPA 226
Query: 231 --KFRSDSETSLPKLSHCQLEADVKAESIV 258
K R DS+ K+S CQ+E D ++IV
Sbjct: 227 NYKLRPDSQ----KVSLCQIELDCSCDAIV 252
>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
Length = 913
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 26/161 (16%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT--ETMLQQLAASIDKALNIALG 143
K PVIR+FG +G+ C FV G PY Y+ +P + E + ++ +++I K
Sbjct: 24 KEPVIRLFGRGEDGRSVCCFVPGFEPYFYVNTKSDPESAGELLKERFSSAIKK------- 76
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPY 203
+ + +KF GY A + LK+ Y+P ++ ++ D + E Y
Sbjct: 77 ----------VEVVRKFEPVGYQAAPKPMLKVTTYDPGNVPEIRDEIAGIPAVKE---IY 123
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLS 244
E+ I + +F ID L+GM+ + V+ SD+ PK+S
Sbjct: 124 ETDILFRNRFLIDRELHGMNWVS---VELSSDNSPD-PKIS 160
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 34 KVPVIRVFGNNIEGKKTCVFVHGVFPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVF 93
K PVIR+FG +G+ C FV G PY Y+ +P + + E + I+KV V+R F
Sbjct: 24 KEPVIRLFGRGEDGRSVCCFVPGFEPYFYVNTKSDPESAGELLKERFSSAIKKVEVVRKF 83
>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
Length = 984
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYKDSV 148
+R+FG EG C VHG PYLY+ + L + ++DK+ +N K++V
Sbjct: 1 MRMFGITEEGNSVCAHVHGFAPYLYVAAPR-GFDRSHLCEFRKALDKSVMNDMRSNKENV 59
Query: 149 QH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF-NERFQP--- 202
Q V + + ++ + GY+ +++ TF+K+ + P ++ ++ LL + + FQ
Sbjct: 60 QEAVLDVELVERQSILGYNGEDKFTFIKVTVALPRLLAAVKRLLEKEQMMPSMDFQDCRV 119
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADV 252
YES+I + ++F +D + G S IE +R + +P + CQ+E DV
Sbjct: 120 YESNIDFDIRFMVDTGVVGCSWIELPAGSWRMRQKGKIPAPETRCQIEVDV 170
>gi|403353908|gb|EJY76499.1| DNA polymerase [Oxytricha trifallax]
Length = 1068
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGY 144
P IR++G +G VH PY Y+ H T LQ++ + ++ +
Sbjct: 73 PHIRMYGVTAQGNSVLCHVHNFDPYFYVEVDSKKHPNFTPEDLQKIKSDLN-------NW 125
Query: 145 KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQ--- 201
+ V + + +K + GY F+KI P ++ +L L NG+ Q
Sbjct: 126 NKQEECVKLVELVQKNSIMGYLEKSGLFIKIYCSLPKYVQQLRSLFENGSFTLRGSQCFS 185
Query: 202 --PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
YES++ Y L+F ID+ + GM I K+R + T K+S CQLE DV+ + ++
Sbjct: 186 HITYESNLSYSLRFMIDHQIVGMQWIRIEAGKYRKRTGT---KMSSCQLEIDVEDPNDII 242
Query: 260 DM 261
+
Sbjct: 243 GL 244
>gi|281208976|gb|EFA83151.1| hypothetical protein PPL_03941 [Polysphondylium pallidum PN500]
Length = 167
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
FS+ IV IDF+++KP D HS L N I VP++RVFG+ G+K C+ +H +FPY
Sbjct: 81 FFSIRIVDIDFYLAKPTVPLDVTHSPLDNSPIPLVPIVRVFGSTPAGQKACLHLHKLFPY 140
Query: 61 LYIPFHHE 68
+I + +
Sbjct: 141 FFIEYSEK 148
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+ HS L N I VP++RVFG+ G+K C+ +H +FPY +I + +
Sbjct: 102 VTHSPLDNSPIPLVPIVRVFGSTPAGQKACLHLHKLFPYFFIEYSEK 148
>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
Length = 1111
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIA 141
I VP+ R++G EG C VHG PY ++ P + Q+ +I LN
Sbjct: 128 IGPVPIFRMYGVTSEGNSVCCHVHGFSPYFFVSAPDNFTDADCKPFQEALNTI--VLNDM 185
Query: 142 LGYKDSVQ-HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE- 198
++VQ V + I + ++GY D ++ F+K+ + P ++ + LL V+ +
Sbjct: 186 RSNPNNVQVAVLAVEIVNRINLFGYRGDTKSKFIKVTVALPRLIAAAKRLLERETVYPKG 245
Query: 199 ---RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
+Q +ES+I + ++F D L G S +E K+ S+ K + CQ+E D E
Sbjct: 246 GVHAYQAFESNIDFDIRFMTDTGLVGCSWVELPPGKWMYHSQ----KQTRCQIEVDCSWE 301
Query: 256 SIV 258
+V
Sbjct: 302 KLV 304
>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
Length = 1030
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIALGY 144
VP++R++G EG C VHG PYL++ T+ + ++KA+ ++
Sbjct: 49 VPIMRMYGVTSEGHSVCCHVHGFSPYLFVSAPGN-FTDKDCEPFKKELNKAVMADLRSNR 107
Query: 145 KDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF----NER 199
++ + + + + + + GY +E F+KI + P ++ + LL ++ +
Sbjct: 108 EEIREAILAVELVYRQNIMGYQGEENMGFIKITVALPRLIAACKRLLEKEVIYPPAGSHC 167
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
FQ +ES++ + ++F +D ++ G S +E ++ S ++ +S CQ+E DV E+++
Sbjct: 168 FQAFESNVDFDIRFMVDTDIVGCSWVELPAGSWKLRSPSTY--VSRCQIETDVSWEALI 224
>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
Length = 1052
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFH----HEPITETMLQQLAASI 134
KVP++R+FG G +HG PY Y+ P H + + + +++ + ++
Sbjct: 67 KVPIVRMFGITASGHSVVTHIHGYLPYFYVLAISNFKPEHCGKFRDALNKVVIKDMRSNK 126
Query: 135 DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG 193
D + L +V +V SI YGYH + ++ +LKI + P ++ + LL G
Sbjct: 127 DNVSDAVL----AVDYVMKESI------YGYHGNTKSPYLKITMALPKLIAPAKRLLEQG 176
Query: 194 AVFNE----RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
F+E + YES+I + ++F +D ++ G + I ++R ++ + CQ+E
Sbjct: 177 FQFSEYPIHNYAGYESNIDFEIRFMVDTDVVGCNWIVLPAGQYRVRPRNNMK--TRCQIE 234
Query: 250 ADVKAESIV 258
+DV + V
Sbjct: 235 SDVAWDQFV 243
>gi|390339587|ref|XP_003725042.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Strongylocentrotus purpuratus]
Length = 1696
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
P+IR+FG G +HG PY YIP + E + D L KD
Sbjct: 713 TPIIRMFGVTEAGNSVLCHIHGFTPYFYIPAPQNFVPEHCSKFRMCVNDAVLADMRSNKD 772
Query: 147 SV-QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF----NERF 200
++ Q V + + +K +YG+H ++ FLKI + P ++ LL G + +
Sbjct: 773 NLTQAVLAVDVMQKENIYGFHGNKMMPFLKITMAYPKLIAPARRLLEAGLSVPPYPHRGY 832
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
Q YES+I + ++F +D ++ G + IE +R S + S Q+E DV + +
Sbjct: 833 QTYESNIDFEIRFMVDADVVGCNWIEVPAGTYRVRSSSGHAPTSVSQIEIDVAWDRFI 890
>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
Length = 1036
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPITETMLQQLAASIDKALN 139
V ++R++G +EG C VHG PY ++ H P + + + + A +
Sbjct: 48 VSIMRMYGVTMEGNSVCCHVHGFVPYFFVSAPSGFDEKHCRPFKDALNKVVMADLRSN-- 105
Query: 140 IALGYKDSVQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFN 197
++ +Q V + + + +YGY +++ FL+I + P ++ + LL V++
Sbjct: 106 -----REGMQEAVVAVEMVWRQNVYGYRGEDKDLFLRITVTLPRLIAACKRLLEKEIVYS 160
Query: 198 E----RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR---SDSETSLPKLSHCQLEA 250
+ + +ES+I ++F +D N+ G S +E K+R D+ LP S CQ+E
Sbjct: 161 QLGPHHYTSFESNIDVDIRFMVDTNVVGCSWVELPSGKWRIRMKDNPMGLPLTSRCQIEC 220
Query: 251 DV 252
DV
Sbjct: 221 DV 222
>gi|388852680|emb|CCF53598.1| probable DNA polymerase delta catalytic subunit [Ustilago hordei]
Length = 1057
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
+ + P IR++G VEG C ++G PY YI H P LN+
Sbjct: 81 AVGQPPAIRMYGVTVEGHSVCAHIYGFLPYFYI---HAP--RGFTANTCNDFTNHLNLLF 135
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERF 200
G + V I K + GY E F+K+ + + +SK+ G V F + F
Sbjct: 136 GSR----AVNRSEIVSKKSLMGYAGHENVAFIKLTISDLRGVSKIRGAFERGEVGFRDLF 191
Query: 201 QPYES-----HIPYILQFCIDYNLYGMSNIEFNMV--KFRSDSETSLPKLSHCQLEADVK 253
P ++ +I Y L+F ID + GM+ I K R DS+ K+S CQ+E D
Sbjct: 192 TPGDACLTYENIAYTLRFMIDLKIVGMNWIRVKAANYKLRPDSQ----KVSLCQIELDCS 247
Query: 254 AESIV 258
++I+
Sbjct: 248 CDAIL 252
>gi|294890775|ref|XP_002773308.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878360|gb|EER05124.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 609
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VPVIR+FG G +HG PY Y P + + Q S + A G +
Sbjct: 63 EVPVIRMFGVTATGNSLMCHIHGFLPYFYCPRPDQTVDCERFQTRLESALRGSQTASGSR 122
Query: 146 DSVQHVFHISICKKFPMYGYHADERT--FLKILLYEPYHMSKLEDLLLNG-------AVF 196
Q V + I + + G+ + ++ + P +S +L G A++
Sbjct: 123 -CKQLVTSVEIVVRENLMGWTGRNTASEYFRVTVALPKFISTSRGVLERGIPVLQGDALW 181
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKA-E 255
N +E++IPY L+F ID ++ G S +E + S +++ ++S CQ+E DV+
Sbjct: 182 N--CTTFETNIPYPLRFMIDNDIGGGSWVELPAGSYTSRTDSD--RVSTCQIEVDVQDYR 237
Query: 256 SIVVDMAAND 265
I+ MA D
Sbjct: 238 QIIGHMAEGD 247
>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
Length = 1050
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIALGY 144
VPVIR+FG G C +HG PY YI ++ T+ L + +++A+ ++
Sbjct: 63 VPVIRMFGITKVGNSVCCHIHGFSPYFYINLPND-FTQADLSRFKEKLNEAVVSDMRSNR 121
Query: 145 KDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGAVFN----ER 199
+ + V + + + + Y D+ F KI L P ++ + LL V+
Sbjct: 122 DNITEAVLMVELVRGKSLVEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHHT 181
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F +E+++ +F +D N+ G IE K+ E P S CQ+E D+
Sbjct: 182 FHFFEANVDIETRFMVDTNILGCCWIELPAGKWFKRPENKFPVTSRCQIEVDI 234
>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
[Tribolium castaneum]
Length = 1172
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL--NIALGY 144
VPVIR+FG G C +HG PY YI ++ T+ L + +++A+ ++
Sbjct: 63 VPVIRMFGITKVGNSVCCHIHGFSPYFYINLPND-FTQADLSRFKEKLNEAVVSDMRSNR 121
Query: 145 KDSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGAVFN----ER 199
+ + V + + + + Y D+ F KI L P ++ + LL V+
Sbjct: 122 DNITEAVLMVELVRGKSLVEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHHT 181
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F +E+++ +F +D N+ G IE K+ E P S CQ+E D+
Sbjct: 182 FHFFEANVDIETRFMVDTNILGCCWIELPAGKWFKRPENKFPVTSRCQIEVDI 234
>gi|294890731|ref|XP_002773286.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878338|gb|EER05102.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 664
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VPVIR+FG G +HG PY Y P + + Q S + A G +
Sbjct: 63 EVPVIRMFGVTATGNSLMCHIHGFLPYFYCPRPDQTVDCERFQTRLESALRGSQTASGSR 122
Query: 146 DSVQHVFHISICKKFPMYGYHADERT--FLKILLYEPYHMSKLEDLLLNG-------AVF 196
Q V + I + + G+ + + ++ + P +S +L G A++
Sbjct: 123 -CKQLVTSVEIVVRENLNGWTGRDTASEYFRVTVALPKFISTSRGVLERGIPVLQGDALW 181
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKA 254
N +E++IPY L+F ID ++ G S +E + R+DS+ ++S CQ+E DV+
Sbjct: 182 N--CTTFETNIPYPLRFMIDNDIGGGSWVELPAGSYTPRTDSD----RVSTCQIEVDVQD 235
Query: 255 -ESIVVDMAAND 265
I+ MA D
Sbjct: 236 YRQIIGHMAEGD 247
>gi|256087234|ref|XP_002579779.1| DNA polymerase delta catalytic subunit [Schistosoma mansoni]
Length = 1182
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP+IR+FG +G C VHG PY Y+P + T+ + ++ +ALN L +
Sbjct: 139 VPIIRLFGITEKGHSVCAHVHGFLPYFYVPAPKDFSTDHL-----SAFREALNSMLLKEK 193
Query: 147 S-----VQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFN-- 197
S +QH V ++ +K +YG+H + FL+I L P ++ + +L NG F
Sbjct: 194 SKEFEGLQHLVLRVTCEEKQNIYGFHGNRSLPFLRITLALPRLIAPAKRILDNGLSFADY 253
Query: 198 --ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
+ + +E++I + ++F D + G S +E K+ T +L+ KA
Sbjct: 254 SLQSYPAFEANIDFEIRFMTDTQMTGCSWVEAPTQKYHLRDSTQ-------KLDDMKKAI 306
Query: 256 SIVVDMAANDSDVATSGG 273
+ + + N S ++T+ G
Sbjct: 307 NQKSNHSVNSSTISTTNG 324
>gi|350645608|emb|CCD59733.1| DNA polymerase delta catalytic subunit,putative [Schistosoma
mansoni]
Length = 1177
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 23/198 (11%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP+IR+FG +G C VHG PY Y+P + T+ + ++ +ALN L +
Sbjct: 139 VPIIRLFGITEKGHSVCAHVHGFLPYFYVPAPKDFSTDHL-----SAFREALNSMLLKEK 193
Query: 147 S-----VQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFN-- 197
S +QH V ++ +K +YG+H + FL+I L P ++ + +L NG F
Sbjct: 194 SKEFEGLQHLVLRVTCEEKQNIYGFHGNRSLPFLRITLALPRLIAPAKRILDNGLSFADY 253
Query: 198 --ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
+ + +E++I + ++F D + G S +E K+ T +L+ KA
Sbjct: 254 SLQSYPAFEANIDFEIRFMTDTQMTGCSWVEAPTQKYHLRDSTQ-------KLDDMKKAI 306
Query: 256 SIVVDMAANDSDVATSGG 273
+ + + N S ++T+ G
Sbjct: 307 NQKSNHSVNSSTISTTNG 324
>gi|448080488|ref|XP_004194650.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359376072|emb|CCE86654.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1520
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 54/204 (26%)
Query: 84 IQKVPVIRVFGNNVEGKK------------TCVFVHGVFPYLYIPFHH-----------E 120
+QKVP+IR++G +E K+ VH FPY Y+ +
Sbjct: 30 VQKVPIIRIYGT-LEIKRDPKDRQAVDYFNVLAHVHNCFPYFYVGVDSKYDDILNEDSAD 88
Query: 121 PITETMLQQLAASIDKA-------------LNIALGYKDSV-------QHVFHISICKKF 160
I + +QL+ S + +NI Y + V +V +S C+
Sbjct: 89 KILHYLEEQLSNSFKRNKGAEDLEFEENDDVNIYDDYANDVDVSGQKRNYVASVSFCRGV 148
Query: 161 PMYGYHADERTFLKILLYEPYHMSKLEDLL----------LNGAVFNERFQPYESHIPYI 210
P+YG+ E F+KI L P S+L +L+ L YE+HIP++
Sbjct: 149 PIYGFATQETAFIKISLLSPMFKSRLVNLINEKKLNPIDPLRSRATRSSVLLYEAHIPFL 208
Query: 211 LQFCIDYNLYGMSNIEFNMVKFRS 234
LQF D+NLY + + + + FRS
Sbjct: 209 LQFLADFNLYSCNWLLVDKLFFRS 232
>gi|242018791|ref|XP_002429857.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212514875|gb|EEB17119.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1096
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI-DKALNIALGYKDS 147
++R++G +EG C VHG PY Y+ + TE + ++ D +N +++
Sbjct: 110 IMRMYGVTMEGNSVCCHVHGFAPYFYVSVPSD-FTEDHCKPFKKALNDVVMNDIRSNREN 168
Query: 148 VQH-VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE----RFQ 201
++ + + + K M+GY D++ FLK+ + P + + L+ V+ +Q
Sbjct: 169 IKEAILDVELVFKQNMFGYEGDKKNKFLKVTIILPKLAAACKRLMDKETVYKAFGGYYYQ 228
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEF--NMVKFR-SDSETSLPKLSHCQLEADVKAESIV 258
+ES+I + ++F +D ++ G S IE K R DS P S CQLE DV +
Sbjct: 229 FFESNIDFDIRFMVDTDVVGCSWIELPPGTWKIRMKDSNHDYPITSRCQLEVDVGWNQFI 288
Query: 259 V 259
Sbjct: 289 A 289
>gi|357157316|ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Brachypodium distachyon]
Length = 1106
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL +IR+FG EG C VHG PY YI P P + QQ
Sbjct: 119 HRELLPNTSGPAAIIRIFGVTKEGHSVCCQVHGFEPYFYISCPSGMGPDDISRFQQALEV 178
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
K N + V+ V + K+ M+ ++FLKI++ P ++ +L G
Sbjct: 179 RMKESNRSSNVPRFVKRVDLVQ--KQTIMHYQTQKSQSFLKIVVALPTMVASCRGILERG 236
Query: 194 AVF----NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
++ F YES+I + L+F ID N+ G + IE K+R + +S+CQLE
Sbjct: 237 ITIEGFGSKSFLTYESNILFALRFMIDCNIVGGNWIEVPRGKYRKAARI----MSYCQLE 292
Query: 250 AD 251
D
Sbjct: 293 LD 294
>gi|68478723|ref|XP_716630.1| DNA polymerase zeta subunit fragment [Candida albicans SC5314]
gi|46438302|gb|EAK97635.1| DNA polymerase zeta subunit fragment [Candida albicans SC5314]
Length = 1261
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 63/201 (31%)
Query: 84 IQKVPVIRVFGN-------------NVEGKK-----------TCVFVHGVFPYLYIPFHH 119
+ +VP+IR++G+ N + +K + VH +PY+Y+ H
Sbjct: 56 VTQVPIIRIYGSLSVQNSLSNTDSPNKKKRKIDETTSPAVFNVVIHVHNFYPYIYVDCHE 115
Query: 120 EPIT----ETMLQQLAASIDKALNIALGYKDSVQ--------------------HVFHIS 155
T + ++ + ++ L + Y+ S + ++ ++S
Sbjct: 116 TDFTKLENDDFIKLITDYLETVLEESFKYRKSSKNLDDDEQNHVENLKRSGQRKYIANVS 175
Query: 156 ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF----------NERFQP--- 202
+CK P+YG+ R F KI L P + S+L L + N + P
Sbjct: 176 VCKGVPIYGFQLGYRFFYKISLLSPLYKSRLAKLFQENTISLFRIGMEKKKNVTYNPEPA 235
Query: 203 --YESHIPYILQFCIDYNLYG 221
YE+HIPY+LQF DYNL+G
Sbjct: 236 YVYEAHIPYLLQFLTDYNLFG 256
>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
Length = 1139
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN-IALGYK 145
V + R+FG G + VHG P++Y P T +ML + ++DK + K
Sbjct: 149 VQIFRLFGVTKGGNSVLMHVHGFCPFIYTPAPAN-FTPSMLGEFKMALDKQIKETTSSAK 207
Query: 146 DSVQHVFHISICKKFPMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGAVFNER----- 199
D + V + I K +YG+HA +R FLKI L + ++ L G + +
Sbjct: 208 DVPEVVMMVEIVSKESIYGFHATGKRPFLKIYLVQHKFINPARRALEQGTITLSKLGTLS 267
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADVKAESIV 258
++ YES++ L+F ++ L G + +E K++ S +S PK +S Q E DV ++ +
Sbjct: 268 YEVYESNLELNLRFMVETQLVGCNWVEVPAGKYKFRSFSSTPKPVSLAQYELDVAFDAFI 327
Query: 259 VDMAAND 265
A ++
Sbjct: 328 SHPAEDE 334
>gi|238881005|gb|EEQ44643.1| hypothetical protein CAWG_02917 [Candida albicans WO-1]
Length = 1630
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 63/201 (31%)
Query: 84 IQKVPVIRVFGN-------------NVEGKK-----------TCVFVHGVFPYLYIPFHH 119
+ +VP+IR++G+ N + +K + VH +PY+Y+ H
Sbjct: 56 VTQVPIIRIYGSLSVQNSLSNTDSPNKKKRKIDETTSPAVFNVVIHVHNFYPYIYVDCHE 115
Query: 120 EPIT----ETMLQQLAASIDKALNIALGYKDSVQ--------------------HVFHIS 155
T + ++ + ++ L + Y+ S + ++ ++S
Sbjct: 116 TDFTKLENDDFIKLITDYLETVLEESFKYRKSSKNLDDDEQNHVENLKRSGQRKYIANVS 175
Query: 156 ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF----------NERFQP--- 202
+CK P+YG+ R F KI L P + S+L L + N + P
Sbjct: 176 VCKGVPIYGFQLGYRFFYKISLLSPLYKSRLAKLFQENTISLFRIGMEKKKNVTYNPEPA 235
Query: 203 --YESHIPYILQFCIDYNLYG 221
YE+HIPY+LQF DYNL+G
Sbjct: 236 YVYEAHIPYLLQFLTDYNLFG 256
>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
Length = 1091
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP++R++G +EG C VHG PY Y+ E ++ ++D+ L+
Sbjct: 105 VPIMRMYGVTMEGNSVCCHVHGFTPYFYV-LTPTTFKEEHIKPFKDALDRGILDDMKSNP 163
Query: 146 DSVQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNE----R 199
D+VQ V + + + ++GY D + FLKI + P ++ + ++ +F
Sbjct: 164 DNVQEAVVGVELVYRQSIFGYSGDAKFPFLKISVAVPKLIATAKRIIEKNDIFPTFPGFY 223
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAESI 257
Q +E++I + ++F +D + G + IE + + R+ T +P LS CQ+E DV I
Sbjct: 224 GQVFETNIDFDIRFMVDNKITGCNWIELHPKSYSLRTPDTTRIP-LSRCQIEVDVAFNRI 282
Query: 258 V 258
V
Sbjct: 283 V 283
>gi|405119357|gb|AFR94130.1| delta DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 1059
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 16/169 (9%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P +R+FG N G V+G PY Y+ + + LQ LA I+ +++ A G
Sbjct: 83 PTLRLFGVNKSGNSVLAHVYGFKPYFYVAAPSGFLNKD-LQPLADKINSSIS-APG---- 136
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLED--LLLNGAVFNERFQP-- 202
V + +I + ++GY D+ F+KI + +P ++SK++D L+ FN F P
Sbjct: 137 -PCVTNCAIFNRRSLWGYRGDDTVPFIKITISDPKNLSKVKDEFFTLSPIDFNGLFPPEV 195
Query: 203 --YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
YES+I Y ++F ID + GM+ + ++ R D K S CQ+E
Sbjct: 196 LTYESNIAYTMRFMIDTKIVGMNWV--SIPGGRYDLLEGGNKKSQCQIE 242
>gi|402223554|gb|EJU03618.1| hypothetical protein DACRYDRAFT_93925 [Dacryopinax sp. DJM-731 SS1]
Length = 1097
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
I P + +FG +G + V G PY YI + ++Q + + +N
Sbjct: 117 AIDGSPSLHLFGVTEQGHSVLMHVTGFHPYFYIA-----VPRGFVEQDCDTFRRYIN--- 168
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-----F 196
+ + + +F + I KK ++GY D++ FLKI++ +P + K+ + G + F
Sbjct: 169 --ERNDEAIFRLEIIKKKSLWGYRGDDQNPFLKIVISKPRLLPKIRGMFDRGEIDYKGLF 226
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
YES+I Y ++F ID + GM+ IE K++ S + ++S CQ+E V+
Sbjct: 227 TGPVPTYESNISYEMRFMIDCRVVGMNWIEVPAGKYQLRS--AREQVSKCQIEFTVQWNQ 284
Query: 257 IV 258
+
Sbjct: 285 FI 286
>gi|308800812|ref|XP_003075187.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1|
dna pol (ISS) [Ostreococcus tauri]
gi|116061741|emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1|
dna pol (ISS), partial [Ostreococcus tauri]
Length = 1115
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLY--IPFH-HEPITETMLQQLAASIDKALNIALGYK 145
V+R+FG +G C VHG PY Y +P + E ET ++L + A A G
Sbjct: 131 VVRMFGVTNDGHSVCAHVHGFEPYFYASVPENFGEADCETFRRRLNEEVSSARKNAPG-- 188
Query: 146 DSVQHVFHISIC---KKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG----AVFNE 198
VF I++ K+ M+ +R F KI + P +S +L G + +
Sbjct: 189 -----VFVIAVTLERKQSLMHYSEMKDRLFAKITMGLPNMVSAARGILEKGFSVPGIRDG 243
Query: 199 RFQPY---ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
F Y ES+I Y L+F +D + G + IE ++ S+ K+SHCQ+E DV +
Sbjct: 244 SFTTYPTFESNIVYALRFMVDCGVVGGNWIELPAGDYKVRSK----KVSHCQIEVDVSYD 299
Query: 256 SIV 258
I+
Sbjct: 300 KII 302
>gi|5011|emb|CAA41968.1| catalytic subunit DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1084
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGY 144
VP IR+FG G V V G PY Y+ P P ML++ +D N +
Sbjct: 113 VPSIRLFGVTDNGNSILVHVVGFLPYFYVKAPVGFRP---EMLERFTQDLDATCNGGV-- 167
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQP- 202
+ H I K +YG+ +E++ F+KI P +S+ ++ G E P
Sbjct: 168 ------IDHCIIEMKENLYGFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPV 221
Query: 203 ------YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+ES+ Y+L+F ID ++ GM+ I K++ + ++S+CQ+EA + +
Sbjct: 222 GVGVTTFESNTQYLLRFMIDCDVVGMNWIHLPASKYQFRYQN---RVSNCQIEAWINYKD 278
Query: 257 IV 258
++
Sbjct: 279 LI 280
>gi|198429892|ref|XP_002125320.1| PREDICTED: similar to Polymerase (DNA directed), delta 1, catalytic
subunit [Ciona intestinalis]
Length = 1064
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI---PFHHEPITETMLQQLAASIDKALNIALG 143
P+IR++G EG HG PY Y+ P + E L + K + G
Sbjct: 83 APIIRMYGVTTEGHSILCHFHGFLPYFYVKAMPGFKDEHCEEFQNCLNEIVLKEMR---G 139
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG----AVFNE 198
KD + V+ + C + MYGYH+ ++ FLKI + ++ + +L G +
Sbjct: 140 NKDVTKAVYKVECCMRQNMYGYHSGGKSKFLKITVAVQRLVATTKRMLEGGFHTPTYPDH 199
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+ +ES I + ++F D NL G + +E N K++ E + + QLE DV
Sbjct: 200 AYSVFESFIDFEIRFMTDTNLTGCNWVELNPGKYKIRKEMT----TSAQLEVDV 249
>gi|19112916|ref|NP_596124.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe 972h-]
gi|12644199|sp|P30316.2|DPOD_SCHPO RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|6048293|emb|CAB58156.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe]
Length = 1086
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGY 144
VP IR+FG G V V G PY Y+ P P ML++ +D N +
Sbjct: 113 VPSIRLFGVTDNGNSILVHVVGFLPYFYVKAPVGFRP---EMLERFTQDLDATCNGGV-- 167
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQP- 202
+ H I K +YG+ +E++ F+KI P +S+ ++ G E P
Sbjct: 168 ------IDHCIIEMKENLYGFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPV 221
Query: 203 ------YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+ES+ Y+L+F ID ++ GM+ I K++ + ++S+CQ+EA + +
Sbjct: 222 GVGVTTFESNTQYLLRFMIDCDVVGMNWIHLPASKYQFRYQN---RVSNCQIEAWINYKD 278
Query: 257 IV 258
++
Sbjct: 279 LI 280
>gi|173384|gb|AAA35303.1| DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1086
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGY 144
VP IR+FG G V V G PY Y+ P P ML++ +D N +
Sbjct: 113 VPSIRLFGVTDNGNSILVHVVGFLPYFYVKAPVGFRP---EMLERFTQDLDATCNGGV-- 167
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQP- 202
+ H I K +YG+ +E++ F+KI P +S+ ++ G E P
Sbjct: 168 ------IDHCIIEMKENLYGFQGNEKSPFIKIFTTNPRILSRARNVFERGEFNFEELFPV 221
Query: 203 ------YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+ES+ Y+L+F ID ++ GM+ I K++ + ++S+CQ+EA + +
Sbjct: 222 GVGVTTFESNTQYLLRFMIDCDVVGMNWIHLPASKYQFRYQN---RVSNCQIEAWINYKD 278
Query: 257 IV 258
++
Sbjct: 279 LI 280
>gi|391325933|ref|XP_003737481.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1088
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP-ITETMLQQLAASIDKA-LNIALGY 144
VPV RVFG+ EG VHG PY Y+ P + L++ ++++A L G
Sbjct: 105 VPVTRVFGSTEEGHSVLCHVHGFLPYFYV--QAPPGFNKGSLEEFRKNLNQAVLGDMKGN 162
Query: 145 KDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAV-------F 196
K+ + V + + K +YGY F+KI + P ++ + LL +V F
Sbjct: 163 KNVAEAVLNCELVDKQNIYGYTDRGLEPFIKITVALPRLIAPSKRLLEGASVSIRSHPSF 222
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKA 254
N ++P+E++I + ++F +D G S I + K+ R + E K S CQ EAD+
Sbjct: 223 N--YRPFEANIDFEIRFMVDTQTVGCSWITLSPGKYTLRPEGE----KTSLCQYEADINW 276
Query: 255 ESIV 258
+ +
Sbjct: 277 KDFI 280
>gi|395331770|gb|EJF64150.1| hypothetical protein DICSQDRAFT_81194 [Dichomitus squalens LYAD-421
SS1]
Length = 1083
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+R+FG +G V PY YI + A + +N LGY
Sbjct: 109 TLRMFGVTQDGHSVLALVTDFLPYFYIA-----TPRGFSNEDAGPFQRHINNILGYG--- 160
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQP---- 202
V H+ + K ++GY D+ +F+KI + + + K+ L G FN F+
Sbjct: 161 -AVRHVELTTKRSLWGYRGDDWVSFVKITVIDQRSIPKVRGLFERGECKFNGLFETDVAT 219
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ES+I Y L+F ID + GM+ IE K+ + K SHCQ+E VK + +
Sbjct: 220 FESNIAYTLRFMIDTRVVGMNWIEVPAGKYSLLEGKA--KKSHCQIEFTVKWDQFI 273
>gi|324120686|dbj|BAJ78734.1| DNA polymerase delta catalytic subunit [Pedetontus unimaculatus]
Length = 1035
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDK-ALNIALGYK 145
VPV+R++G EG C +HG PY Y+ E + S+++ LN +
Sbjct: 49 VPVMRMYGVTAEGNSVCCHIHGFSPYFYVQ-PPENFKKEHCTAFKESLNRFILNDMKSNR 107
Query: 146 DSV-QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE----R 199
D++ + V + + ++ +Y Y + FLKI++ P ++ + LL +F
Sbjct: 108 DNLSEAVLCVELVERENIYSYRGGNKVPFLKIIIALPKLIAPAKRLLEKENMFPALGIHS 167
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR---SDSETSLPKLSHCQLEADVKAES 256
+ +ES+I + ++F +D + G + +E K++ ++++L +S CQ+E DV E
Sbjct: 168 YTAFESNIDFDIRFMVDAEIVGCNWLELPASKWQLRDRGNKSTLQPVSRCQIECDVSWEK 227
Query: 257 IVVDMAAND 265
++ D
Sbjct: 228 MISHAPEGD 236
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 9 IDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
ID ++ +P+A + VPV+R++G EG C +HG PY Y+
Sbjct: 30 IDHYIGRPLAGMPGAQT-------GPVPVMRMYGVTAEGNSVCCHIHGFSPYFYV 77
>gi|150863959|ref|XP_001382618.2| DNA polymerase zeta [Scheffersomyces stipitis CBS 6054]
gi|149385215|gb|ABN64589.2| DNA polymerase zeta, partial [Scheffersomyces stipitis CBS 6054]
Length = 1489
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 41/181 (22%)
Query: 77 SELRNLV--IQKVPVIRVFGNNVEGKKT-------CVFVHGVFPYLYIPFHHEPITETML 127
S+L NL + +VPVIR++G K T V VH +PYLY+ E
Sbjct: 27 SKLDNLYGNVNQVPVIRIYGTIAVPKTTPNLVFNVLVHVHNYYPYLYVD-----CFEADK 81
Query: 128 QQLAAS--IDKALN-IALGYKDSVQH-----------VFHISICKKFPMYGYHADERTFL 173
++LA+ ID +N + DS +H + +S+C+ P+YG+ R
Sbjct: 82 RKLASKEHIDNVINYLEASMIDSFKHDHQNSRTRRKFIAGVSVCRGTPIYGFQLGHRLVY 141
Query: 174 KILLYEPYHMSKLEDLLLNGAVF-------------NERFQPYESHIPYILQFCIDYNLY 220
+I L P + ++L LL + ++ YE+HIPY LQF D+NL+
Sbjct: 142 RISLLSPKYKTRLSKLLYERKIDLSSLELDSNLKRPKKKALVYEAHIPYFLQFLADFNLF 201
Query: 221 G 221
G
Sbjct: 202 G 202
>gi|353237606|emb|CCA69575.1| probable DNA polymerase delta catalytic subunit [Piriformospora
indica DSM 11827]
Length = 1069
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 71 TETIVHSEL--RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP--ITETM 126
T+TIV ++ + P +R++G +G ++G PY Y+ H P E
Sbjct: 81 TDTIVFQQIDIEQYIEANRPKLRMYGVTEDGHSVMANIYGFLPYFYV---HCPRGFLEED 137
Query: 127 LQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSK 185
L I+KA + + I I KK ++GY D FLKI+L P + K
Sbjct: 138 LGPFREFINKATD--------PDAILDIQIVKKKSIWGYRGDTDVPFLKIILSIPRLVPK 189
Query: 186 LEDLLLNGAV-FNERF-------QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
+ G + + E F + YES++ Y+L+F +D + GM+ IE K+
Sbjct: 190 VRGAFEKGELDYKELFNRGGMGTETYESNLLYVLRFMVDTKVTGMNWIEIPAGKYTVRKS 249
Query: 238 TSLPKLSHCQLEADVKAESIV 258
K S CQLE DV+ + +
Sbjct: 250 N---KTSDCQLEVDVQWDQFI 267
>gi|403343190|gb|EJY70918.1| DNA polymerase [Oxytricha trifallax]
Length = 1071
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
VIR+FG G VH PY Y+ + + + Q SI LN +
Sbjct: 81 VIRMFGITQAGNSVVAHVHNFTPYFYVEVDTRKLAQPLTPQDLMSIKSDLN---NWNKGQ 137
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER---FQ--PY 203
+ + I + +K + Y + TFLKI P ++++L + NG+ + FQ +
Sbjct: 138 ECIRSIELTQKSSVMHYQEKKNTFLKIYTTLPKYVNQLRSVFENGSYSYKSQHCFQHVTF 197
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
ES++PY L+F ID + GMS I+ N + + +L K S+ Q+E DV+
Sbjct: 198 ESNLPYALRFMIDNEVVGMSWIKVNAGNY-AVRPRNLRK-SNAQIEIDVE 245
>gi|242070347|ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL ++R+FG EG C VHG PY YI P P + Q
Sbjct: 112 HKELLPNSSGSAAILRIFGVTREGHSICCQVHGFEPYFYIGCPSGMGPDDISRFHQTLEG 171
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLN 192
K N + + + V + + +K + Y E + FLKI++ P ++ +L
Sbjct: 172 RMKESNRS---SNVPRFVKRVELVQKQTIMHYQTQESQPFLKIVVALPTMVASCRGILER 228
Query: 193 G----AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
G + ++ F YES+I + L+F ID N+ G + IE K+R + +S+CQL
Sbjct: 229 GIMIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIELPAGKYRKAARL----MSYCQL 284
Query: 249 EAD 251
E D
Sbjct: 285 ELD 287
>gi|443899075|dbj|GAC76406.1| ribonucleotide reductase, alpha subunit [Pseudozyma antarctica
T-34]
Length = 1160
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP--ITETMLQQLAASIDKALNI 140
+ + P IR++G +G C VHG PY YI H P T A LN+
Sbjct: 184 AVGQPPAIRMYGVTAQGNSVCAHVHGFLPYFYI---HAPRGFTANTCNDFA----NHLNV 236
Query: 141 ALGYKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNE 198
G + V + + K + GY E F+K+ + + + ++ G + F +
Sbjct: 237 LFG----ARTVHNAQVVSKKSLMGYAGQENVAFIKLTISDLRSLPRIRGSFERGEIGFRD 292
Query: 199 RFQPYE-----SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
F + +I Y L+F ID + GM+ I N ++ E+ K+S CQ+E D
Sbjct: 293 LFTAGDVCLTYENIAYTLRFMIDLKIVGMNWIRINEANYKLRPESQ--KVSLCQIELDCS 350
Query: 254 AESIV 258
+++V
Sbjct: 351 CDALV 355
>gi|428182790|gb|EKX51650.1| DNA polymerase delta catalytic subunit [Guillardia theta CCMP2712]
Length = 985
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 25/183 (13%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE-------PITETMLQQLAASIDKALNIAL 142
+R++G EG V VHG PY Y+ E I ET+ +++A +D + +
Sbjct: 1 MRLYGVTAEGHSAVVHVHGYDPYFYVQAPKEINENICQEIAETLNRRMAERVDSSKKTSN 60
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG----AVFN 197
G Q++ ++ + K ++ Y ++ FLKI P H++ +L NG +
Sbjct: 61 G-----QYIRYVEMEYKQTIWNYRQEDFVKFLKISTVWPQHVTTARSILENGIQISNLGT 115
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAE 255
F YES++ +++++ +D + G + I N RS+ T+ CQ E DV +
Sbjct: 116 RTFLTYESNVVFVMRYMVDAGIVGANWITLPANQYLTRSNPNTT------CQFEMDVMWQ 169
Query: 256 SIV 258
++
Sbjct: 170 KLI 172
>gi|409040940|gb|EKM50426.1| hypothetical protein PHACADRAFT_104509 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1068
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P +R+FG G V PY Y+ +T+ + A L S
Sbjct: 85 PTLRMFGVTQAGNSVLAHVTDFHPYFYVAAPRGFLTDDI---------GAFRSYLNNHAS 135
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-----FNERFQ 201
V +S+ + ++GY DE+ F++I + + + K D L + FN F+
Sbjct: 136 GGSVRDVSLVYRRSLWGYRGDEKVPFIRIEVSDQRSLPKTRDKWLFNSFRGECHFNNLFK 195
Query: 202 P-----YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
YES+I Y+L+F ID + GM+ +E + E K SHCQLE VK +
Sbjct: 196 TDSVSTYESNIAYVLRFMIDAKIVGMNWVELPAGGYTIMQEKD--KKSHCQLEVSVKWDK 253
Query: 257 IVVDMA 262
IV A
Sbjct: 254 IVSHQA 259
>gi|159463358|ref|XP_001689909.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
gi|158283897|gb|EDP09647.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
Length = 1091
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFH-HEPITETMLQQLAASIDKALNIAL 142
+++VPV+R+FG N G C VHG PY I H LA ++ + L L
Sbjct: 99 VKQVPVLRLFGVNAAGNSVCALVHGFEPYFLIERRPHWGADHIQALGLALNVGQEL---L 155
Query: 143 GYKDSVQH--VFHISICKKFPMYGYH--ADERTFLKILLYEPYHMSKLEDLLLNG---AV 195
G V V I ++ ++ + FLKI++ P ++ LL G +
Sbjct: 156 GKAKGVGGPAVTRIEPAERRSIWNFQPPGTSTAFLKIVVSVPNLVAPARGLLEGGMSLSA 215
Query: 196 FNE--RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
N+ + YES++ + L+F +D + G + +E ++ ET+ P ++HCQ+EA ++
Sbjct: 216 VNDFVKCTTYESNVLFTLRFMVDCKVVGGNWVELPAGAYQ--LETARP-MTHCQIEAHIR 272
Query: 254 AESIV 258
+ ++
Sbjct: 273 YDKLI 277
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 9 IDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+D+++++P A D V E +++VPV+R+FG N G C VHG PY I
Sbjct: 81 VDYYLAEPRAGVDTVPVE-----VKQVPVLRLFGVNAAGNSVCALVHGFEPYFLI 130
>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium
dendrobatidis JAM81]
Length = 1125
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY 144
++ ++R+FG EG +HG PY Y+ H T + L A++D A+ L
Sbjct: 131 EESSLLRMFGITEEGHSVVCHIHGFSPYFYVAAPH-GFQATHIPGLIAALDNAVLSGLHR 189
Query: 145 KDSV--QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA----VFNE 198
+ S V I++ ++ ++GY FL+I + +++ + L +G +
Sbjct: 190 QRSSGGSAVLGITLAERSSIFGYQQGMALFLRIDVRLQSYIAPTKRALKDGVSVPNLGTV 249
Query: 199 RFQ-PYESHIPYILQFCIDYNLYGMSNIEFNM----VKFRSDSETSLPKLSHCQLEADVK 253
R +ES+IPY L+F ID ++ G S +E ++ R D+ S+CQ+E D+
Sbjct: 250 RIDLTFESNIPYPLRFMIDLSIQGASWVELPKKCYSIRRRDDT------TSNCQIEVDIV 303
Query: 254 AESIV 258
A+ IV
Sbjct: 304 AQHIV 308
>gi|340502511|gb|EGR29193.1| hypothetical protein IMG5_161090 [Ichthyophthirius multifiliis]
Length = 1092
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEP-ITETMLQQLAASIDKALNIAL 142
+ K P+IR++G + + V G PYLYI + E +L+ L ++K +I +
Sbjct: 85 VPKAPIIRLYGVTKDQNSIMIHVKGKDPYLYIQIPKNILVNEMLLENLKNELNKQ-SINM 143
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADE---RTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
S + I I + + + + TFLKI + P H+S L + G F E
Sbjct: 144 RSVKSKYFIKKIEITEGESIKNFKGKDYEIETFLKIYTFLPAHVSTLRGIFEKGFHF-ES 202
Query: 200 FQ----PYESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
Q +ES++P+ L+F ID ++ GM N++ NM + RS + S CQ+E D+
Sbjct: 203 IQFPRTSFESNMPFSLRFMIDKDIVGMGWINLKKNMFEIRSIDKHK----SRCQIEIDIH 258
Query: 254 AESI 257
+++
Sbjct: 259 QDNL 262
>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
Length = 1096
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAAS 133
++ S +N V VPVIR++ +G V VH FPY Y+ + LQ+L
Sbjct: 107 LLQSNEKNYV--SVPVIRIYTVTNDGYSVLVNVHNFFPYFYVEM-PSGFDQEDLQKLEVM 163
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLN 192
++ +LN YK Q + HI I + + Y D +R FLKI + P + L+
Sbjct: 164 MNDSLNANSQYKIYDQKILHIEIVQTESLMYYKRDGKRDFLKITVLLPKMVPSLKKFFEG 223
Query: 193 GAVFNERFQP---YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
N + YE+++P+IL++ ID + G S + F K+S+C LE
Sbjct: 224 IVKVNNKSIGGIVYEANLPFILRYLIDKKITGSSWLLCKKKLFHIRPRHK--KVSNCSLE 281
Query: 250 ADVKAESI 257
D+ E +
Sbjct: 282 IDISYEHV 289
>gi|344254015|gb|EGW10119.1| DNA polymerase zeta catalytic subunit [Cricetulus griseus]
Length = 2601
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 188 DLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
+LL +GA+ N+ +QP+E+HIPY+LQ IDYNLYGM+ I VKFR
Sbjct: 7 ELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR 52
>gi|342179963|emb|CCC89437.1| putative DNA polymerase delta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1026
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPI-TETMLQQLAASIDKALNIA 141
+ VP++R++G +EG V + P+L+I P + P+ ++T Q+L +D +
Sbjct: 45 EDVPIVRLYGVTMEGHSVLVHCYNFEPFLWIQAPANWLPVHSKTFKQELNTVLDPTTH-- 102
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVF---- 196
+ V + + K+ + Y + E +LKI++ P H+ KL LL +G V
Sbjct: 103 -----ATDTVVRVEVHKRRSLMFYDPNGESDYLKIVVQLPQHIPKLRGLLSSGVVCVGVW 157
Query: 197 --NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL-PKLSHCQLEADVK 253
FQ +ES+I + L+F +D N+ G N V + S P+ S CQ+E
Sbjct: 158 EGTRSFQTFESNIIFPLRFLVDNNIGGC-----NWVTIPAGQHHSFAPRTSTCQIEVCCS 212
Query: 254 AESI 257
ES+
Sbjct: 213 HESL 216
>gi|221505528|gb|EEE31173.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 3940
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 37/159 (23%)
Query: 99 GKKTCVFVHGVFPYLYIPF----HHEPITETMLQQLAASI-------------------- 134
G+ CV VH VFPY ++P H +P E LQ +A +
Sbjct: 110 GRMCCVTVHNVFPYFFVPLPREAHEKP--EVWLQWFSAKLRVWEDKLTSRSDPGASRPAR 167
Query: 135 ----DKALNIALGYKDSVQH------VFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
+A G + VF + + KK YGY R F++I P +
Sbjct: 168 GGGQGRAKRTGPGQAPAPSSTPGPPLVFALRLVKKRAFYGYDHAPRLFVQISTLHPGSKT 227
Query: 185 -KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGM 222
+L LLL G V QP+E HIP++ F D++L GM
Sbjct: 228 VQLAALLLQGRVTGHPLQPFEIHIPFVSHFLADFHLRGM 266
>gi|449681697|ref|XP_004209898.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Hydra
magnipapillata]
Length = 1082
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
++R FG ++G +HG PY YI + E Q +DKA+ + K+ +
Sbjct: 104 IVRFFGVTMQGNSVLCHIHGFVPYFYI-VAPQDFKEEKCSQYRDCLDKAILADMKSKNDI 162
Query: 149 QH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKL---EDLLLNGAVFNERFQP- 202
H V ++ K +YGY+ + +R FL+I + + KL +L G +F F P
Sbjct: 163 SHAVLNVEPVMKASIYGYNFNKKRLFLRITV----ALQKLIAPAKRILEGGLF--IFGPG 216
Query: 203 ----YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
YES+I + ++F +D N +G + IE ++ +S+ S CQ+E DV
Sbjct: 217 GCHTYESNIDFEVRFMVDTNTFGCNWIELPRGSYQVRKGSSMK--SRCQIEVDV 268
>gi|242060584|ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL ++R+FG EG C VHG PY YI P P + Q
Sbjct: 114 HKELLPNSSGSAAILRIFGVTREGHSICCQVHGFEPYFYIGCPSGMGPDDISHFHQTLEG 173
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
K N + V+ V + K+ M+ + FLKI++ P ++ +L G
Sbjct: 174 RMKESNRSSNVPRFVKRVELVQ--KQTIMHYQTQQSQPFLKIVVALPTMVASCRGILERG 231
Query: 194 ----AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ ++ F YES+I + L+F ID N+ G + IE K+R + +S+CQLE
Sbjct: 232 IMIEGLGSKSFLTYESNILFALRFMIDCNIVGGNWIELPAGKYRKAARV----MSYCQLE 287
Query: 250 AD 251
D
Sbjct: 288 LD 289
>gi|147800370|emb|CAN70929.1| hypothetical protein VITISV_000386 [Vitis vinifera]
Length = 505
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 32/145 (22%)
Query: 1 MFSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPY 60
+FS+ IV++D++M+ PI D +S + L ++ ++R +E +K
Sbjct: 10 IFSVRIVSMDYYMASPIPDLDICYSSFQELELESTWLVRKRKWRVEFEK----------- 58
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP---- 116
S ++++VPVIR++G+ G+KTC+ VH PYLY+P
Sbjct: 59 ----------------SRAEGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPYLYVPCTDL 102
Query: 117 FHHEPI-TETMLQQLAASIDKALNI 140
P +T ++ ++KAL I
Sbjct: 103 MPQSPQEADTYTHAVSLGVEKALKI 127
>gi|302687116|ref|XP_003033238.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
gi|300106932|gb|EFI98335.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
Length = 1072
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQ 149
+R+FG G V PY Y+ Q + LN GY ++V
Sbjct: 103 LRMFGVTDAGHSVLATVTDFLPYFYVA------------QPRGFTNDDLNSFKGYLNNVT 150
Query: 150 H--VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES 205
V I I KK ++GY D + FLK+ + EP + + + NG + + YES
Sbjct: 151 GGCVIKIEIVKKRSLWGYMGDAVSPFLKLTITEPRSLPRRGECDFNGLFPVGDPIKTYES 210
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+I Y L+F ID N+ GM+ +E K+ D K S CQ+E +V+ ++ +
Sbjct: 211 NIVYPLRFMIDTNVVGMNWLELPAGKY--DLIPDKQKKSRCQIEVNVRYDAFI 261
>gi|290985690|ref|XP_002675558.1| predicted protein [Naegleria gruberi]
gi|284089155|gb|EFC42814.1| predicted protein [Naegleria gruberi]
Length = 1019
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEP-ITETMLQQLAASIDKALNIALG 143
VP++R++G EG V G PY YI P + P Q L A + + G
Sbjct: 22 VPIVRLYGVTEEGFSVACHVRGYTPYFYIEQPENFNPDQCRNFAQFLNARMSERGIKKAG 81
Query: 144 YKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG----AVFNE 198
D ++V ++SI KK + Y D +++FL+I P + + + L G +
Sbjct: 82 KVD--EYVVNVSIEKKKSLMHYAFDTKKSFLRIEASIPPMVPHIREFLEKGFNVPGIGFR 139
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAES 256
+F YES++ ++L+ ID N++G + +E K+R++++ K SH Q+E D+ E
Sbjct: 140 KFLTYESNVLFVLRCMIDSNIFGANWVELPAGTYKWRNEND----KTSHAQIEVDISYED 195
Query: 257 IV 258
++
Sbjct: 196 LI 197
>gi|224083478|ref|XP_002307042.1| predicted protein [Populus trichocarpa]
gi|222856491|gb|EEE94038.1| predicted protein [Populus trichocarpa]
Length = 1081
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 75 VHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAA 132
H EL ++R+FG EG C VHG PY Y+ P P + ++
Sbjct: 93 THKELLPDRSGSAAILRIFGVTGEGHSVCCLVHGFEPYFYVSCPPGMNPDDISHFHKILE 152
Query: 133 SIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
+ +N V+ + + K+ MY FLKI++ P +S +L
Sbjct: 153 GKMREVNRNTKVPKFVRRIELVH--KRSIMYYQQQQSHPFLKIVVALPTMVSGCRGILDK 210
Query: 193 GAVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
G + F YES++ + L+F ID N+ G + IE K++ S++ LS+CQL
Sbjct: 211 GIQIDGLGMRSFMTYESNVLFALRFMIDCNVVGGNWIEVPAGKYKKTSKS----LSNCQL 266
Query: 249 EAD 251
E D
Sbjct: 267 EFD 269
>gi|351727343|ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA polymerase delta catalytic subunit
gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine max]
Length = 1088
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL V +IR+FG EG C VHG PY YI P P + Q
Sbjct: 75 HGELLPNSSGPVAIIRIFGVTKEGHSVCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEG 134
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
+ N V+ + + ++ MY ++ + FLKI++ P ++ +L G
Sbjct: 135 RMREANRNSNVGKFVRRIEMVQ--RRSIMYYQQSNSQPFLKIVVALPTMVASCRGILDRG 192
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ + F YES++ + L+F ID N+ G + I K++ +++ LS+CQLE
Sbjct: 193 IQLDGLGMKSFLTYESNVLFALRFMIDCNIVGGNWIGIPAGKYKKTAKS----LSYCQLE 248
Query: 250 AD 251
D
Sbjct: 249 FD 250
>gi|237838597|ref|XP_002368596.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211966260|gb|EEB01456.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
ME49]
Length = 3952
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 66/159 (41%), Gaps = 37/159 (23%)
Query: 99 GKKTCVFVHGVFPYLYIPF----HHEPITETMLQQLAASI----DK--------ALNIAL 142
G+ CV VH VFPY ++P H +P E LQ +A + DK A A
Sbjct: 118 GRMCCVTVHNVFPYFFVPLPREAHEKP--EVWLQWFSAKLRVWEDKLTSRSDPGASRPAR 175
Query: 143 GYKDSVQH------------------VFHISICKKFPMYGYHADERTFLKILLYEPYHMS 184
G VF + + KK YGY R F++I P +
Sbjct: 176 GGGQGRAKRTGPGQAPAPLSTPGPPLVFALRLVKKRAFYGYDHAPRLFVQISTLHPGSKT 235
Query: 185 -KLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGM 222
+L LLL G V QP+E HIP++ F D++L GM
Sbjct: 236 VQLAALLLQGRVTGHPLQPFEIHIPFVSHFLADFHLRGM 274
>gi|168019806|ref|XP_001762435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686513|gb|EDQ72902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1173
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASID 135
H EL V+R+FG EG C VHG PY YI + I + + ++++
Sbjct: 161 HKELCPYRSGPAAVLRMFGVTQEGNSVCGNVHGFEPYFYISC-LDGIGPDDVPKFRSTLE 219
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG- 193
+ A + + I I +K + Y + R+FLKI++ P ++ +L G
Sbjct: 220 TRMREANRNSKTQNFITKIEIVQKRSVMYYQVQKARSFLKIVVALPTMVAGCRGILEKGI 279
Query: 194 ---AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ F YES++ + L+F ID ++ G + IE + S +LS+CQLE
Sbjct: 280 NIDGIGQRCFLTYESNVLFALRFMIDCDIVGGNWIELPAGNYCK----STRRLSYCQLEL 335
Query: 251 DVK 253
D++
Sbjct: 336 DIQ 338
>gi|449451191|ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL + ++R+FG EG C VHG PY YI P P ++ + +
Sbjct: 99 HKELLPNLSGPAAILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEA 158
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
K +N + V+ + + ++ MY ++FLKI++ P ++ +L G
Sbjct: 159 RMKEVNRNNKAPNFVRRIELVQ--RRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRG 216
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ F YES++ + L+F ID N+ G + IE + K++ ++ LS+CQLE
Sbjct: 217 IQIEGFGMKSFMTYESNVLFALRFMIDCNVVGGNWIEVPVGKYKK----TVRSLSYCQLE 272
Query: 250 AD 251
D
Sbjct: 273 FD 274
>gi|449493366|ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Cucumis sativus]
Length = 573
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL + ++R+FG EG C VHG PY YI P P ++ + +
Sbjct: 99 HKELLPNLSGPAAILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEA 158
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
K +N + V+ + + ++ MY ++FLKI++ P ++ +L G
Sbjct: 159 RMKEVNRNNKAPNFVRRIELVQ--RRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRG 216
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ F YES++ + L+F ID N+ G + IE + K++ + LS+CQLE
Sbjct: 217 IQIEGFGMKSFMTYESNVXFALRFMIDCNVVGGNWIEVPVGKYKK----XVRSLSYCQLE 272
Query: 250 AD 251
D
Sbjct: 273 FD 274
>gi|401828411|ref|XP_003887919.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon
hellem ATCC 50504]
gi|392998927|gb|AFM98938.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon
hellem ATCC 50504]
Length = 974
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIP------FHHEPITETMLQQLAASIDKALNIA 141
P+ + GN GK V V FPY YI + E I E+ +Q+L
Sbjct: 26 PIFSISGNMKSGKPLQVLVRNFFPYFYIEAANGKEYRKEDIKES-IQRL----------- 73
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE--- 198
D V + K + GY ++TF K+ L P+ + L L G V
Sbjct: 74 ----DVKATVLEVEAVMKQTIMGYTEGKKTFYKVTLNTPHASAALRAFLEGGVVIKGEKV 129
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFN 228
RF+ YES P++L+F D + GMS ++ N
Sbjct: 130 RFRVYESGFPFVLRFMCDLGIVGMSYLKVN 159
>gi|412988964|emb|CCO15555.1| DNA polymerase delta catalytic subunit [Bathycoccus prasinos]
Length = 1114
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKALNIALG 143
+ ++R+FG +G CV VHG PY Y +P E TE + S++ +
Sbjct: 120 QAAILRMFGVTEDGHSVCVHVHGFNPYFYCAVP---ETFTEQHIPAFLMSLNSQMMAHQR 176
Query: 144 YKDSVQHV---FHISICKKFPM-YGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE- 198
+S +H H+ + K+ M + + + FL+I++ P +++ +L NG +E
Sbjct: 177 SSNSARHFALDAHLILDKQSLMNFQPNGKKGRFLRIIMMLPTQVAQARGILENGIHVDEL 236
Query: 199 -----RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
F +ES+I Y L+F +D + G + +E +R + K S+CQ+E DV
Sbjct: 237 HQSALTFPTFESNILYTLRFMVDRAVVGGNWLELPAKNYRVRPQQR--KASYCQIECDV 293
>gi|393240523|gb|EJD48049.1| hypothetical protein AURDEDRAFT_102277 [Auricularia delicata
TFB-10046 SS5]
Length = 1067
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 20/210 (9%)
Query: 56 GVFPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI 115
G + P T+ +V ++ ++ I +FG EG + PY Y+
Sbjct: 63 GASEWARPPLVLNEKTDDVVFQQIDIDYGEEAAAINMFGVTREGHSVLAHITDFLPYFYL 122
Query: 116 PFHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLK 174
P + E +L LN +G +V I+I K ++ Y D+ + F K
Sbjct: 123 PVPRGFLDEHLL-----PFQADLNNKVG------NVISINIVSKRSLWAYRGDDNSPFFK 171
Query: 175 ILLYEPYHMSKLEDLLLNGAVFNERFQP------YESHIPYILQFCIDYNLYGMSNIEFN 228
I + P + ++ + G + P +ES++ Y L+F ID L GM+ +
Sbjct: 172 ITVSHPRFVPRVRGVFERGEYNYQGLFPGGNMVTFESNVVYTLRFMIDTQLVGMNWVTVP 231
Query: 229 MVKFRSDSETSLPKLSHCQLEADVKAESIV 258
K++ TS K S CQ+E DVK + +
Sbjct: 232 AGKYK--LRTSETKRSRCQIELDVKWDQFI 259
>gi|260944378|ref|XP_002616487.1| hypothetical protein CLUG_03728 [Clavispora lusitaniae ATCC 42720]
gi|238850136|gb|EEQ39600.1| hypothetical protein CLUG_03728 [Clavispora lusitaniae ATCC 42720]
Length = 1533
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 57/200 (28%)
Query: 86 KVPVIRVFGN-NVEGKKTCVF-----VHGVFPYLYIPF--HHE-PITETMLQQLAASIDK 136
KVP+IR++G+ V + + VH +PY+Y+ + H E IT+ L+ + ++
Sbjct: 30 KVPIIRIYGSLRVRTSQDLAYNVLVHVHNYYPYVYLDWWGHDESAITDDELRDFKSYLET 89
Query: 137 ALNIALGYKDSVQ-------------------------HVFHISICKKFPMYGYHADERT 171
+ + + ++ I +CK P+YGYH T
Sbjct: 90 CMKASFKRNHDIDSDADSDVDRYEILLRGRNKTKVDSYYIASIVLCKGVPVYGYHLGYST 149
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNER---------------FQP--YESHIPYILQFC 214
+KI P++ ++ LL NER F P YE+HI ++ QF
Sbjct: 150 KVKISFLSPHYKTRFTRLL------NERKIDFGKFFVKEKKSIFTPNIYEAHINFLTQFM 203
Query: 215 IDYNLYGMSNIEFNMVKFRS 234
D+NLYG +E + FRS
Sbjct: 204 ADFNLYGCGWLEIDSCFFRS 223
>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
Length = 918
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
PVIR+FG + EGK C V G PY Y+ + + L+Q+A+ I K
Sbjct: 25 PVIRLFGRSSEGKSICCQVPGFEPYFYVNCNAD------LEQVASDI----------KQK 68
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
+ V I ++F GY LKI+ ++P ++ ++ D + E YE+ I
Sbjct: 69 FEQVKAIEEVERFEPVGYQTTPIRMLKIITHDPGNVPEIRDDIATMPAVKE---IYEADI 125
Query: 208 PYILQFCIDYNLYGMS 223
+ +F ID NL+GM
Sbjct: 126 LFRNRFLIDRNLHGMG 141
>gi|71005878|ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
gi|46097098|gb|EAK82331.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
Length = 1057
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
++ + P IR++G +G C +HG PY YI H P LN+
Sbjct: 81 IVGQPPSIRMYGVTQQGHSVCAHIHGFLPYFYI---HAP--RGFTANTCHDFTNHLNVLF 135
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERF 200
G + V + K + GY E F+K+ + + + K+ G + F + F
Sbjct: 136 G----ARTVHKSELVSKKSLMGYAGQENVAFIKLTISDLRSVPKIRGSFERGEIGFRDLF 191
Query: 201 QPYE-----SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
P + +I Y L+F ID + GM+ + +R E+ K+S CQ+E D +
Sbjct: 192 TPGDVSLTYENIAYTLRFMIDLKIVGMNWVRVQPANYRLRPESQ--KVSLCQIELDCSCD 249
Query: 256 SIV 258
+I
Sbjct: 250 AIA 252
>gi|324120722|dbj|BAJ78752.1| DNA polymerase delta catalytic subunit [Forficula hiromasai]
Length = 1120
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VPV+R++G EG C HG PY Y+ E T+ ++DK + + Y +
Sbjct: 145 VPVMRLYGVTQEGNSICCHAHGFAPYFYVS-APEKFTDKDCLPFMEALDKVVIADIRYNN 203
Query: 147 S-VQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF---NERF 200
+ V+H + + I ++ M+ Y E+ FL++ + P ++ + L+ ++ R+
Sbjct: 204 NKVEHAILSVEIVERQTMWTYTGPEKDKFLRVTVALPTLIAACKRLIEKQDIYPVHQHRY 263
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
+ +E++I + ++F +D + G I +R + + CQLE D+ + ++
Sbjct: 264 RFFETNIEFDIRFMVDSEISGCCWITLPAQAWRP----RINPTTRCQLECDIAWDKLIA 318
>gi|427792855|gb|JAA61879.1| Putative dna polymerase type-b family, partial [Rhipicephalus
pulchellus]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI---PFHHEPITETMLQQLAASIDKALNIALG 143
+P++R+FG +G VHG PY Y+ P + T + L ++ K ++
Sbjct: 21 IPIVRMFGVTDDGHSVLCHVHGFLPYFYVEAPPNFRKEHCWTFREALNKAVLK--DMRSN 78
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNE---- 198
V I + K +YGY++ +T FLK+ + P ++ + LL G+V +
Sbjct: 79 KNQLTDTVVGIDMVLKQSIYGYNSKGKTPFLKVTMVLPRLIAPAKRLLETGSVTVDPYGA 138
Query: 199 -RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
++ +ES++ + ++F +D ++ G IE K++ E + ++S Q+E DV + +
Sbjct: 139 PSYRIFESNVDFEIRFMVDTHVVGCCWIELPRGKYKVRDERT--RVSRAQIEVDVAWDEM 196
Query: 258 VV 259
V
Sbjct: 197 VA 198
>gi|123410205|ref|XP_001303643.1| DNA polymerase family B containing protein [Trichomonas vaginalis
G3]
gi|121885038|gb|EAX90713.1| DNA polymerase family B containing protein [Trichomonas vaginalis
G3]
Length = 1174
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 72 ETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLA 131
ET+ +S N I++ P ++FG G+ C+ VHG FP +Y+ + P L+Q
Sbjct: 28 ETVTNS---NREIKRSPWFQIFGTTETGEHECLIVHGFFPEIYV---NCPSNPNELEQFT 81
Query: 132 ASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLL 191
+ + + G D+ + + + P YGY D+ F+++ L +P +L +
Sbjct: 82 SELISYIERDFG--DTCIKSYDYA--EYIPAYGYQ-DKCKFIRLFLVQPDQQQQL-GRHI 135
Query: 192 NGAVFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
N +N + YE+H P ++F YNL G I +R S LS E
Sbjct: 136 NAFAWNGKPHHAYEAHFPNFIKFLSKYNLTGFGYIRLKHA-WRVKS-----ILSRYGTEV 189
Query: 251 DVKAESIVVD 260
+ E I+VD
Sbjct: 190 HCRVEDIIVD 199
>gi|157869856|ref|XP_001683479.1| putative DNA polymerase zeta catalytic subunit [Leishmania major
strain Friedlin]
gi|68126544|emb|CAJ04879.1| putative DNA polymerase zeta catalytic subunit [Leishmania major
strain Friedlin]
Length = 3096
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 100 KKTCVFVHGVFPYLYIPFHHEPITETMLQ-QLAASIDKALNIALGYKDSVQHVFHISICK 158
++ C+ VHGV+P L +P + ++ L QL A + L + + Q V ++ I
Sbjct: 205 RRACLHVHGVYPSLLLPQYDRNVSADQLAAQLEAVALRVLARQGTFVPTQQLVHNVHIVH 264
Query: 159 KFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYILQFCIDY 217
+F +YGY F ++ L +P + ++ D+L N V R+Q Y++H Y QF + +
Sbjct: 265 RFNVYGYRPHAHAFYEVELIDPDLLPRVVDVLQNSTEVGGRRWQLYDAHYRYHTQFMVRW 324
Query: 218 NLYGMS 223
+ G++
Sbjct: 325 RVSGIA 330
>gi|339245491|ref|XP_003378671.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
gi|316972406|gb|EFV56084.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
Length = 1069
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 37/225 (16%)
Query: 76 HSELRN-LVIQKV-PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH-EPITETMLQQLAA 132
HS+++N L +V VIR++G +G C VHG PY Y+ + +P ++
Sbjct: 93 HSDMQNGLKTDQVHAVIRMYGATKDGHSVCCHVHGFQPYFYVQIENFDPARASL---FCD 149
Query: 133 SIDKALNIALGY-KDSVQHVFHISICKKFPMYGYH-ADERTFLKILLYEP---------- 180
S+++A+ + KD + + + I + +YGY+ TF+KI++ P
Sbjct: 150 SLNQAVVQEMRTNKDIKKPILDVEILQGRNLYGYNLMKSTTFVKIIVALPKIVPIKFVNF 209
Query: 181 --YHMSKLEDL-------LLNGAVFNERFQP------YESHIPYILQFCIDYNLYGMSNI 225
+ + K E +L ++ QP +ES+I + ++F ID ++ G I
Sbjct: 210 YIFLILKCEKTRWFLARRILETGGWSCASQPINALLTFESNIDFTIRFMIDTSMTGCCWI 269
Query: 226 EFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND-SDVA 269
E F + SL K+S CQ+E D+ + +V+ D SD+A
Sbjct: 270 ELKPSAF---TVRSLKKMSRCQIEVDIDWKKLVIHSPEGDWSDIA 311
>gi|167533381|ref|XP_001748370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773182|gb|EDQ86825.1| predicted protein [Monosiga brevicollis MX1]
Length = 1305
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 41/210 (19%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL-NIALGYK 145
V ++R+FG +G + VHG PYLY + +TE+ L++ +D + N K
Sbjct: 96 VQIVRMFGVTAKGNSVMLHVHGFAPYLYCTMPNN-LTESHLREFKTKLDVLIKNQTAAAK 154
Query: 146 DSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV--------- 195
+ + V + I +K +YGY + FLKI L + +S +L G++
Sbjct: 155 NFSEVVLAVEIVEKESIYGYKGTGKINFLKITLIQHKFISTTRRILEGGSLSISIGPCVC 214
Query: 196 FN---------------------------ERFQPYESHIPYILQFCIDYNLYGMSNIEFN 228
F+ + Q YE ++ + L+F +D + G + IE
Sbjct: 215 FSPVLAKSVPTVATLHVPSLRALLTPSRLQALQVYEGNLEFNLRFMVDTQVVGCNWIELP 274
Query: 229 MVKFRSDSETSLPKLSHCQLEADVKAESIV 258
K++ +E K+S+CQ E D+ ++V
Sbjct: 275 AAKYQMRNEED--KVSYCQYECDIAYNNLV 302
>gi|255726064|ref|XP_002547958.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
gi|240133882|gb|EER33437.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
Length = 1634
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 67/205 (32%)
Query: 84 IQKVPVIRVFG-----------NNVE--------GKKTCVF-----VHGVFPYLYIPFHH 119
+ +VP+IR++G NN ++ VF VH +PY+Y+ H
Sbjct: 55 VTQVPIIRIYGSISIDHNETNQNNTSPSMKKQKLENQSSVFNVVIHVHNFYPYIYVTCHE 114
Query: 120 --------EPITETMLQQLAASIDKALNIALGYKDSV--------------------QHV 151
E E ++ L +++ + G K +++
Sbjct: 115 TDYSKLQDEKFIELVVNYLESALKSSFQQKRGKKGDNSDDDDDNGEENKPTVNSKVRKYI 174
Query: 152 FHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN--------GAVFNER--FQ 201
+SICK P+YG+ + F KI L P + S+L L G V E +
Sbjct: 175 ASVSICKGVPIYGFQVGYQLFYKISLLSPLYKSRLTKLFQEKKISLYRIGMVEKENVIYH 234
Query: 202 P-----YESHIPYILQFCIDYNLYG 221
P YE HIPY+LQF D+NL+G
Sbjct: 235 PEPHYVYEGHIPYLLQFLTDFNLFG 259
>gi|225431691|ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera]
Length = 1089
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H EL +IR+FG EG C VHG PY YI P P + Q+
Sbjct: 102 HKELMPNSSGSAAIIRIFGVTREGHSVCCNVHGFEPYFYISCPPGMGPDDISRFHQVLEG 161
Query: 134 IDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG 193
+ +N V+ + + K+ MY FLKI++ P ++ +L G
Sbjct: 162 RMREVNRNSRVPKFVRRIEMVQ--KRSIMYYQLQSSHPFLKIVVALPTMVTSCRGILDRG 219
Query: 194 AVFN----ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ F YES++ + L+F +D N+ G + IE K++ ++ LS+CQLE
Sbjct: 220 IQIEGFGMKNFVTYESNVLFALRFMVDCNIVGGNWIEVPAGKYKKTAKN----LSYCQLE 275
Query: 250 AD 251
D
Sbjct: 276 FD 277
>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
Length = 1115
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL- 142
+ V ++R+FG G C VHG PY Y+ + + + + +++KA+ +
Sbjct: 123 VGNVAIMRLFGVTKAGNSVCCHVHGFTPYFYVTVPDD-FNKGHIHEFKDTLNKAMLADMR 181
Query: 143 GYKDSV-QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG-----AV 195
++S+ + + + + + ++GYH ++ R FL + + P ++ + LL G
Sbjct: 182 STRESIPEPILSLELMDRESIFGYHGNQTRKFLCVTVALPRLVASGKRLLEKGDGVPSQF 241
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE------TSLPKLSHCQLE 249
+ F+PYE++I + +F +D +L G S + ++ S+ T +S CQ+E
Sbjct: 242 RSHSFKPYEANIDFETRFMVDMSLVGCSWVRLPPKTYQVRSQNPPLNSTIHKSVSRCQIE 301
Query: 250 ADVKAESIV 258
D+ + ++
Sbjct: 302 VDIAYDKLI 310
>gi|300707422|ref|XP_002995919.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
gi|239605160|gb|EEQ82248.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
Length = 977
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI-PFHHEPITETMLQQLAASIDKALNIALGYKD 146
P+I +FG +G + V PY YI P + I E +++ +IDK L+I
Sbjct: 27 PIITIFGTMKDGSPVQLLVKDFNPYFYIQPVGDQNIFEDEIRE---AIDK-LSIK----- 77
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER---FQPY 203
+ ++S K+P+YGY + F K+ P +++ +L G + R F+ +
Sbjct: 78 --GKLLNVSTSMKYPLYGYSESKSLFYKLTFNTPSVFYQIKPILEAGILIKNRLVRFKLF 135
Query: 204 ESHIPYILQFCIDYNLYGM 222
ES+ P++L+F +D N+ GM
Sbjct: 136 ESNFPFVLRFMVDMNIVGM 154
>gi|435850447|ref|YP_007312033.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433661077|gb|AGB48503.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 903
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
PV+R+FG +GK C +V G PY Y+ E L + I + ++
Sbjct: 16 APVVRLFGRAEDGKSVCCYVPGFEPYFYVNASDE------LDLICKLIKERFDV------ 63
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
V ++ I ++F GY +++ +++ YEP H+ ++ D +L + YE+
Sbjct: 64 ----VKNVEIVQRFEPVGYQKSKKSMIQVTTYEPRHVPEIRDDILQ---IPGVMEVYETD 116
Query: 207 IPYILQFCIDYNLYGMSNI 225
I + +F ID L+GM +
Sbjct: 117 ILFRNRFLIDRELHGMGWV 135
>gi|449551085|gb|EMD42049.1| hypothetical protein CERSUDRAFT_90650 [Ceriporiopsis subvermispora
B]
Length = 1717
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIP 208
Q++ I + K YG+HA FLK+ + +P +++ +L +G V RF YESH+
Sbjct: 11 QYIRAIILVKGVHFYGFHASYSPFLKVHIIDPAFVNRAVTILQSGTVMKTRFLVYESHLS 70
Query: 209 YILQFCIDYNLYG 221
Y LQF D+ LYG
Sbjct: 71 YPLQFLCDFGLYG 83
>gi|241993500|ref|XP_002399458.1| DNA polymerase delta catalytic subunit, putative [Ixodes
scapularis]
gi|215492989|gb|EEC02630.1| DNA polymerase delta catalytic subunit, putative [Ixodes
scapularis]
Length = 1018
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL---- 142
VP++R+FG G VHG PY Y+ ++ + ALN A+
Sbjct: 37 VPIVRMFGVTDGGHSVLCHVHGFLPYFYV-----EAPAGFKKEHCRAFKDALNRAVLADM 91
Query: 143 --GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF--- 196
+ V I + K +YGY++ +T FLKI + P ++ + LL G V
Sbjct: 92 RSNKMNLTDAVAAIDLVMKQSIYGYNSKGKTPFLKITMVLPRLIAPAKRLLETGTVSVPP 151
Query: 197 --NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKA 254
++ +E+++ + ++F +D ++ G S IE +R T K+S QLE DV
Sbjct: 152 YGAPCYRVFETNVDFEIRFMVDASVVGCSWIELPKGTYRVREST---KVSRVQLEVDVAW 208
Query: 255 ESIVV 259
+S+V
Sbjct: 209 DSLVA 213
>gi|302801963|ref|XP_002982737.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
gi|300149327|gb|EFJ15982.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
Length = 980
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
++R+FG ++G C +HG PY YI P P + + + + N
Sbjct: 10 ILRMFGVTLQGNSVCCHIHGFEPYFYISCPDGWNPDDTSKFRHTLETRMREANRNSKTPT 69
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN----ERFQP 202
V V + K+ MY R FLKI++ P ++ +L G + F
Sbjct: 70 FVTRVEMVQ--KRSLMYFQTQKARAFLKIVVALPTMVASCRGILEKGITLEGFGHKCFIT 127
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
YES+I + L+F ID N+ G + IE +R + +LS CQ+E D+ IV
Sbjct: 128 YESNILFALRFMIDCNVGGGNWIELPGGSYR----LTPRRLSTCQIEIDILYNKIV 179
>gi|440293443|gb|ELP86560.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
invadens IP1]
Length = 1078
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYKD 146
PV+ ++G G V G PY YI H TE+ L L S++KAL++ + G D
Sbjct: 71 PVLYMYGCTSSGDSVLARVTGFKPYFYISVDH-LYTESELNDLKVSMNKALHVDVQGNTD 129
Query: 147 SVQHVFHISICKKF-PMYGYHA-DERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPY 203
Q+V + ++ + Y A + F+KI L P ++ L LL + V N +FQ +
Sbjct: 130 DDQYVLSVEGVTQYHSIMNYTAYKDDFFVKITLRIPKYVPMLRHLLNDTTRVSNRQFQTF 189
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
E+ I ++L++ ID + G S ++ ++ +++ ++S CQLE + +V
Sbjct: 190 EADILFVLRYMIDAGIVGCSWVKAPPKRYVIIPDSN--RISRCQLEISLDYRDLV 242
>gi|324120720|dbj|BAJ78751.1| DNA polymerase delta catalytic subunit [Euborellia plebeja]
Length = 1078
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK- 145
VPV+R++G G C HG PY Y+ + T+ Q +++K + + Y
Sbjct: 103 VPVMRIYGVTQNGNSICCHTHGYSPYFYVTAPPK-FTDRDCQPFMEALNKVVMADIRYNT 161
Query: 146 -DSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF---NERF 200
Q + + I ++F MY Y D+ TFLKI + P + + L+ ++ + +
Sbjct: 162 YKVEQAILSVDIIQRFNMYIYSGDQPETFLKITVALPTMIPACKRLMEKQDIYPGQSHHY 221
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
+ +E++I + ++F +D + G I K+ S + P + CQ E ++ + ++
Sbjct: 222 RFFETNIDFDIRFMVDTEISGCCWITLPATKW---STMAYP-TTRCQFECNIAWDQLIA 276
>gi|312081845|ref|XP_003143198.1| DNA-directed DNA polymerase III [Loa loa]
gi|307761639|gb|EFO20873.1| DNA-directed DNA polymerase III [Loa loa]
Length = 1084
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 14/182 (7%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLY----IPFHHEPITETMLQQLAASIDKALNIALGY 144
IR+FG CV VHG PY Y IPF I E + L I + +G
Sbjct: 93 TIRLFGATTNQNSVCVQVHGFLPYFYVLLEIPFDETHI-EYAKKYLNDVIKAQVPANIGI 151
Query: 145 KDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVF-----N 197
+V + V + I +Y Y D + FLK+ + P ++ + NG
Sbjct: 152 PKNVDNLVVDLDIVYGASIYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVSLTKGGRT 211
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
E +E++I + ++F D+NL G + + K+R + + +SHCQ E + +
Sbjct: 212 ESLSCFETNIDFEIRFMTDHNLVGCAWVTLPSKKYRIVTGKEM--ISHCQFECSINNTDL 269
Query: 258 VV 259
V+
Sbjct: 270 VI 271
>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana
RWD-64-598 SS2]
Length = 1096
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGYK 145
+R++G G C + PY YIP F ++ I + LN +G +
Sbjct: 119 LRMYGVTEGGHSVCATITHFAPYFYIPAPRGFTNDDID---------AFKDELNRLVGQE 169
Query: 146 DSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGA-------VFN 197
V I ++ ++G+ D+ +FLKI EP + K+ L G
Sbjct: 170 PDA--VMRIEPVQRRSLWGFRGDDWVSFLKIFTLEPKAVPKVRGLFERGECQFRDLFAAG 227
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
E + +ES++ Y+L+F ID + GM+ IE K++ + K S CQLE + +S
Sbjct: 228 EVYPTFESNVAYVLRFMIDTKVVGMNWIEIPAGKYKLVPQKD--KKSTCQLELTTRHDSF 285
Query: 258 V 258
+
Sbjct: 286 I 286
>gi|302308438|ref|NP_985361.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|299790630|gb|AAS53185.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|374108589|gb|AEY97495.1| FAFL189Wp [Ashbya gossypii FDAG1]
Length = 1092
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V+R FG +G V G Y+Y+P P + +D ++ G DSV
Sbjct: 132 VVRFFGVTEQGHSVLCSVTGFKHYMYVP---APANFDARTDVPVLVDYLNDMFDGVVDSV 188
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVF--NERFQPYES 205
+ +C+K ++GY D++ FLK+L+ +PY ++K+ G + + FQ +
Sbjct: 189 E------VCQKQSIWGYSGDQKLQFLKVLVADPYGLNKIRTAFEKGYITPNDTWFQGGTT 242
Query: 206 ---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMA 262
+I Y L+ ID + GMS I K+ + K+S CQLE + + ++ A
Sbjct: 243 TYDNIAYTLRLMIDCGIVGMSWITLPKGKYAMIPKNK--KISTCQLEVSINYKDLISRPA 300
Query: 263 ANDSDVATSG 272
DSD + S
Sbjct: 301 --DSDWSHSA 308
>gi|444316824|ref|XP_004179069.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
gi|387512109|emb|CCH59550.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
Length = 1104
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V+R FG G V G YLY+P PI Q A D+ N +K+ V
Sbjct: 141 VVRFFGVTENGNSILCNVTGFKHYLYVPI---PIKNG---QFAEDPDELTN----FKNHV 190
Query: 149 QH-----VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-----AVFN 197
+ HI I KK ++GY D ++ F K+ L EP ++KL G F+
Sbjct: 191 HQQIPNCISHIEIVKKQSIWGYSGDSKSKFWKVYLNEPNQINKLRTGFERGYFSYNGWFS 250
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
Y+ +I Y L+ ID + GMS I K+ E K+S CQLE + + +
Sbjct: 251 NGTTTYD-NIAYNLRLMIDCGIVGMSWITLPKTKYNLIQENM--KVSTCQLEVTINYKDL 307
Query: 258 VV 259
+
Sbjct: 308 IA 309
>gi|241953567|ref|XP_002419505.1| DNA polymerase zeta catalytic subunit, putative [Candida
dubliniensis CD36]
gi|223642845|emb|CAX43100.1| DNA polymerase zeta catalytic subunit, putative [Candida
dubliniensis CD36]
Length = 1630
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 66/220 (30%)
Query: 84 IQKVPVIRVFGN-------------NVEGKK-----------TCVFVHGVFPYLYIPFHH 119
+ +VP+IR++G+ N + +K + VH +P +Y+ +
Sbjct: 56 VTQVPIIRIYGSLSVQPSSDNTDSPNKKKRKINETTSPAVFHVVIHVHNFYPDIYVDCNE 115
Query: 120 EPIT----ETMLQQLAASIDKALNIALGYKDSVQ--------------------HVFHIS 155
+T E + + ++ AL + + S + ++ ++S
Sbjct: 116 TDLTKLENEKFINLVTDYLEAALKESFKNRKSSKNFEDDESNNLENSKPSGLRKYIANVS 175
Query: 156 ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF----------NERFQP--- 202
+CK P+YG+ R F KI L P + S+L L + N + P
Sbjct: 176 VCKGVPIYGFQLGYRMFYKISLLSPLYKSRLAKLFQENTISLFRIGMEEKENVIYNPEPT 235
Query: 203 --YESHIPYILQFCIDYNLYGMS--NIEFNMVKFRSDSET 238
YE+HIPY+LQF DYNL+G NI+ + V + D++T
Sbjct: 236 YVYEAHIPYLLQFLTDYNLFGCGWINIDKDFVS-KEDAKT 274
>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
Length = 1082
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA-LNIALGYK 145
VP++R++G +EG C VHG PY Y+ T++M + +++K L K
Sbjct: 101 VPIMRMYGVTMEGNSVCCHVHGFTPYFYVTVPSN-FTDSMCNDMKINLNKVILEDLRSNK 159
Query: 146 DSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQP- 202
D+++ V + + + + Y D + F ++ + P ++ + L+ P
Sbjct: 160 DNIRETVLEVRLMQARSIMYYKGDVDIRFARVSVALPRLIAAAKRLIDKQPPSFGLLDPS 219
Query: 203 -YESHIPYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADVKAESIVV 259
YE++I + ++F +D N+ G S IE + K+ RS P+ S CQ+E DV + +
Sbjct: 220 FYETNIDFDIRFMVDTNVVGCSWIELPVGKWLIRSKDSKVKPE-SRCQIEVDVAWNNFIA 278
>gi|340055352|emb|CCC49665.1| putative DNA polymerase zeta catalytic subunit, fragment
[Trypanosoma vivax Y486]
Length = 1934
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 103 CVFVHGVFPYLYIPFHHEPITE----TMLQQLA-ASID---KALNIALG-YKDSVQHVFH 153
C +HGV PY Y+ + ++ T L+ +A A +D K N A + + Q + H
Sbjct: 79 CAHIHGVHPYFYVLCNDTRVSAVQFGTQLEAVANAKLDAREKCPNDASSKFGQAEQIIHH 138
Query: 154 ISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYILQ 212
+ + P YG+H +R F K+ + P + L+ LL + + + + +E+H P+ Q
Sbjct: 139 VELVWLLPFYGFHHSKRPFYKVYVINPALIPPLQRLLCSTMHMCGKSWLVHEAHSPFHFQ 198
Query: 213 FCIDYNLYGMS---------------NIEFNMVKFRS-DSETSLPKLSHCQLEADVKA 254
F +DY L GM+ + + F S + P+LS Q+E DV A
Sbjct: 199 FMVDYGLKGMAPFIIPACTARAPLPEGVGRQIAHFTSFTPDGRPPRLSCAQIEVDVTA 256
>gi|428673126|gb|EKX74039.1| DNA polymerase delta catalytic subunit, putative [Babesia equi]
Length = 1030
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 58 FPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVH--GVFPYLYI 115
+ Y Y P + + HS + + P+IR++G V K+ + VH PY YI
Sbjct: 49 YTYGYAPIDTDVVDMAGDHSNAKK---TETPIIRLYG--VTKKQESILVHLKNFMPYFYI 103
Query: 116 PFHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLK 174
+ TE + L A K L+ +K S++ V +I+I K + Y + T FLK
Sbjct: 104 E-KPKNFTEEHITDLIALFSKHLSEQPQFKRSLRFVLNITIVKLTSLMLYKDNGETDFLK 162
Query: 175 ILLYEPYHMSKLEDLLLNGAVFNERFQP-------------YESHIPYILQFCIDYNLYG 221
I + P +S L + +G + F P YE+++PY+L+F +D + G
Sbjct: 163 ITVALPRMVSTLRTFIESGVAL-QVFDPNNVNARIPLHRITYEANLPYVLRFLLDREVVG 221
Query: 222 MSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
S ++ + S + K SHC +E + I+
Sbjct: 222 GSWLKLPKGSYSVCS--GIEKTSHCNIEVMADYDKII 256
>gi|392574795|gb|EIW67930.1| hypothetical protein TREMEDRAFT_69477 [Tremella mesenterica DSM
1558]
Length = 1056
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETM--LQQLAASIDKALNIALGYK 145
P +R+FG G +HG PY Y+ + + + L+ + S +L A
Sbjct: 81 PTLRLFGVTQNGNSVLAHIHGFKPYFYVAAPSGFLNKDLDPLKDMINSTVTSLGPA---- 136
Query: 146 DSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQP- 202
V + + ++GY D++ F+KI +P ++ K++ G + FN F P
Sbjct: 137 -----VHSCIVVNRKSLWGYRGDDQVPFIKITCTDPKNLPKVKGAFERGQIDFNGLFPPE 191
Query: 203 ---YESHIPYILQFCIDYNLYGMSNIEFNMVKFR--SDSETSLPKLSHCQLE 249
YES+I Y ++F ID + GM+ +E K+ SE K S CQ+E
Sbjct: 192 IMTYESNIAYTMRFMIDTGVVGMNWVELPGGKYEVLEGSE----KRSLCQIE 239
>gi|390596710|gb|EIN06111.1| delta DNA polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1052
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 38/186 (20%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGY 144
+R+FG +G V+ PY YIP F + I +L LN LG
Sbjct: 79 TLRMFGVTEDGHSVLAHVYDFDPYFYIPVPRGFTEDDIPSFLLY---------LNNQLG- 128
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLED------LLLNGAVFN 197
V I + KK ++GY D+ F+K++ P ++ K+ D +F
Sbjct: 129 ---AGCVRKIELVKKRSIWGYRGDDWVPFMKLITDNPRNVPKVRDEPIPCICGFKRDLFP 185
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIE-----FNMVKFRSDSETSLPKLSHCQLEADV 252
E+ +ES++ Y+L+F ID + GM+ IE +N+VK K S CQ+E V
Sbjct: 186 EQTTTFESNLAYVLRFMIDTKVVGMNWIEVPAGKYNLVK---------DKKSQCQIELSV 236
Query: 253 KAESIV 258
+ + +
Sbjct: 237 RWDHFI 242
>gi|115484523|ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
Japonica Group]
gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
Length = 1105
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
++R+FG EG C VHG PY YI P P + Q +++ + + +
Sbjct: 131 ILRIFGVTREGHSVCCQVHGFEPYFYISCPMGMGPDDISRFHQ---TLEGRMKDSNRNSN 187
Query: 147 SVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG----AVFNERFQ 201
+ V I + +K + Y + + FLKI++ P ++ +L G + ++ F
Sbjct: 188 VPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPTMVASCRGILERGITIEGLGSKSFL 247
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
YES+I + L+F ID N+ G + IE K+ + +S+CQLE D
Sbjct: 248 TYESNILFALRFMIDCNIVGGNWIEVPAGKYMKAARI----MSYCQLELD 293
>gi|398015726|ref|XP_003861052.1| DNA polymerase zeta catalytic subunit, putative [Leishmania
donovani]
gi|322499276|emb|CBZ34349.1| DNA polymerase zeta catalytic subunit, putative [Leishmania
donovani]
Length = 3085
Score = 58.9 bits (141), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 100 KKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV----QHVFHIS 155
++ C+ VHGV+P L +P + ++ QLAA ++ L + ++ Q V ++
Sbjct: 205 RRACLHVHGVYPSLLLPQYDRSVSA---DQLAAQLEAVALCVLARQGTLVPTQQLVHNVR 261
Query: 156 ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYILQFC 214
I +F +YGY F ++ L +P + ++ D+L N V ++Q Y++H Y QF
Sbjct: 262 IAHRFNVYGYRPHAYAFYEVELIDPDLLPRVVDVLQNSTEVGGRQWQLYDAHYRYHTQFM 321
Query: 215 IDYNLYGMS 223
+ + + G++
Sbjct: 322 VRWRVSGIA 330
>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 961
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 92 VFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQHV 151
+FG EG + PY Y+P + E LQ +++K L V
Sbjct: 1 MFGTTREGFSVLAHITDFLPYFYLPAPAGFVGE-HLQPFQDNMNKKLG----------EV 49
Query: 152 FHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYI 210
I I K ++ Y +++T FLKI + P +S+ + G + YES++ YI
Sbjct: 50 VSIEIVAKRTIWEYRGEDKTPFLKITVSHPASISR--ECNYQGFFPAGKLVTYESNVGYI 107
Query: 211 LQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
L+F +D ++ GM+ + K++ TS + S CQ+E DV+ + +
Sbjct: 108 LRFMVDTHVVGMNWVTVPAGKYK--LRTSQTRRSSCQIELDVRWDEFI 153
>gi|242007453|ref|XP_002424554.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507997|gb|EEB11816.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 818
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 299 MDPDVYSMQDLLDVKSGALYLKL---KDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQ 354
++PD+Y +LD K+ ++L KD + C L +EP H+ DP++YS+Q
Sbjct: 670 LNPDLYKKVKVLD-KTRLFRMQLYYLKDFLFTCRFAHQLQKNLEKEPSHIFQDPEIYSLQ 728
Query: 355 DLLDVKSGALYLKLKDLVSACSSHVYNCEPTNA 387
D + +K+G L +LKDLV C HV C+ +A
Sbjct: 729 DFIQIKTGELLSRLKDLVKDCFQHVQKCQLCSA 761
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 291 LGQEP-HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSAC 328
L +EP H+ DP++YS+QD + +K+G L +LKDLV C
Sbjct: 711 LEKEPSHIFQDPEIYSLQDFIQIKTGELLSRLKDLVKDC 749
>gi|47219672|emb|CAG02717.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1008
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVH-GVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY 144
KVP++R+FG G + H G F + + +L+ + + D NI++
Sbjct: 45 KVPIVRMFGVTDNGNQRFTAAHLGDF--------QKELNSVVLKDMRGNKD---NISV-- 91
Query: 145 KDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFN----ER 199
V + I +K MYGYH FL+I + P ++ + LL G F +
Sbjct: 92 -----TVLAVDITRKENMYGYHGKRSLDFLRITMAMPRLIAPAKRLLEQGLKFGPFPFQC 146
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
FQ +ES+I + ++F +D ++ G IE K+R E +S CQ E D+
Sbjct: 147 FQAFESNIDFEIRFMVDTDVVGCCWIELPKGKYRVREEKDT--VSLCQYEVDI 197
>gi|336380987|gb|EGO22139.1| hypothetical protein SERLADRAFT_451027 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1062
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
++R+FG G +V PY YI + +N +LG
Sbjct: 95 MLRMFGVTEAGHSVLAYVTDFLPYFYIA-----VPRGFQNDDKEDFRNHINTSLGG---- 145
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
V +I ++ ++GY D+ FLK+ + +P + K+ D L + +ES+I
Sbjct: 146 SFVVNIESVQRRNLWGYRGDDWVAFLKLTICDPKTLPKVRDNLFP---IGQAVSTFESNI 202
Query: 208 PYILQFCIDYNLYGMSNIEFNMVKFR--SDSETSLPKLSHCQLEADVK 253
PY L+F ID + GM+ IE K++ D E K S CQ+E V+
Sbjct: 203 PYALRFMIDTKVVGMNWIEIPAGKYKIMPDKE----KHSQCQVELRVR 246
>gi|302803951|ref|XP_002983728.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
gi|300148565|gb|EFJ15224.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
Length = 984
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
++R+FG +G C +HG PY YI P P + + + + N
Sbjct: 10 ILRMFGVTQQGNSVCCHIHGFEPYFYISCPDGWNPDDTSKFRHTLETRMREANRNSKTPT 69
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN----ERFQP 202
V V + K+ MY R FLKI++ P ++ +L G + F
Sbjct: 70 FVPRVEMVQ--KRSLMYFQTQKARAFLKIVVALPTMVASCRGILEKGITLEGFGHKCFIT 127
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
YES+I + L+F ID N+ G + IE +R + +LS CQ+E D+ IV
Sbjct: 128 YESNILFALRFMIDCNVGGGNWIELPGGSYR----LTPRRLSTCQIEIDILYNKIV 179
>gi|255956273|ref|XP_002568889.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590600|emb|CAP96795.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 68 EPITETIVHSEL--RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP-------FH 118
+P E I ++ + P IR+FG G+ C+ V G YLYI
Sbjct: 99 DPAKENICFQQIDAEEATLMGKPAIRLFGVTEAGQSACLHVTGFEHYLYIAAPVSFTKAD 158
Query: 119 HEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILL 177
+P + Q+L S ++ L ++++ YG+ ++++ ++KI +
Sbjct: 159 CDPYKHFLEQKLGQSFTAISSVQLTMRENI--------------YGFQGNQKSYYIKITV 204
Query: 178 YEPYHMSKLEDLLLNGAV---FNERFQPYES-----HIPYILQFCIDYNLYGMSNIEFNM 229
EP ++L L G+ + + + +I Y+L+F ID L GM+ +E
Sbjct: 205 TEPKMAARLRSALETGSGSMNYKGMWSGADGILTFDNIQYLLRFMIDTGLAGMAWVEAIA 264
Query: 230 VKFRSDSETSLPKLSHCQLEADVKAESIVV 259
K+R ++ +LS+CQ+EA V ++
Sbjct: 265 GKYRLLGQSQ--RLSNCQIEASVDYRDMIA 292
>gi|118400060|ref|XP_001032353.1| DNA polymerase family B containing protein [Tetrahymena
thermophila]
gi|89286694|gb|EAR84690.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1124
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIAL 142
++ P+IR++G + V + GV PYL++ P +P +T L+ + ++K
Sbjct: 108 EREPIIRMYGVTKDQHSVLVSIRGVVPYLFVRLPPQIQPNAQT-LKSIMDDLNKQGKFQR 166
Query: 143 GYKDSVQHVFHISICKKFPMYGYHAD---ERTFLKILLYEPYHMSKLEDLLLNGAVFNE- 198
K + + I + K + Y + T+LKI + P + L ++ G +
Sbjct: 167 NVK-TTNFIRKIEVVKGESIKYYKGKDYAQDTYLKIYTFIPPFIPALRGMIEKGYTIDGI 225
Query: 199 RFQP--YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK-LSHCQLEADVKAE 255
RF +ES+IP+ L++ ID ++ GM I+ + KF+ SL K S CQ+E DV +
Sbjct: 226 RFPAVTFESNIPFALRYMIDADIVGMGWIKLDKEKFKI---RSLDKHKSRCQIEIDVDCQ 282
Query: 256 SIVVDMAANDSDVA 269
+ V M A D A
Sbjct: 283 N-VHGMDAQDPQWA 295
>gi|169775879|ref|XP_001822406.1| DNA polymerase delta catalytic subunit [Aspergillus oryzae RIB40]
gi|238502533|ref|XP_002382500.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|83771141|dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691310|gb|EED47658.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|391871049|gb|EIT80215.1| DNA polymerase delta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1104
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI--TETMLQQLAASIDKALNIALGYK 145
P +R+FG G+ + V G YLYI P+ T+ A ++ +
Sbjct: 123 PAVRLFGVTEAGQSVLLHVTGFQHYLYIA---APVNFTKEDCDPYRAFLESRIGNFQTMI 179
Query: 146 DSVQHVFHISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLLLNGA---------V 195
SVQ +I YGY +++++ LKI + EP +SKL L NG
Sbjct: 180 QSVQVTLRENI------YGYQGNQKSWYLKITVTEPKFISKLRGALENGGQSMNYKGLWT 233
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
E+ ++ +I Y+L+F ID N+ GMS +E K+R E K S+CQ+EA
Sbjct: 234 GIEKIATFD-NIQYLLRFMIDTNISGMSWVEAKAGKYRLIHEKE--KHSNCQIEA 285
>gi|401422575|ref|XP_003875775.1| putative DNA polymerase zeta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492014|emb|CBZ27288.1| putative DNA polymerase zeta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 3059
Score = 58.2 bits (139), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 100 KKTCVFVHGVFPYLYIPFHHEPITETMLQ-QLAASIDKALNIALGYKDSVQHVFHISICK 158
++ C+ VHGV+P L +P + I+ L QL A + L + + Q V ++ I
Sbjct: 205 RRACLHVHGVYPSLLLPQYDRNISADQLAAQLEAVALRVLARQGTFVPNQQLVHNVRIVH 264
Query: 159 KFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYILQFCIDY 217
+F +YGY F ++ L +P + ++ D+L N V ++Q Y++H Y QF + +
Sbjct: 265 RFNVYGYRPHAYAFYEVELIDPDLLPRVVDVLQNSTEVGGRQWQLYDAHYRYQTQFMVRW 324
Query: 218 NLYGMS 223
+ G++
Sbjct: 325 GVNGVA 330
>gi|339898271|ref|XP_001465833.2| putative DNA polymerase zeta catalytic subunit [Leishmania infantum
JPCM5]
gi|321399485|emb|CAM68262.2| putative DNA polymerase zeta catalytic subunit [Leishmania infantum
JPCM5]
Length = 3085
Score = 58.2 bits (139), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 100 KKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV----QHVFHIS 155
++ C+ VHGV+P L +P + ++ QLAA ++ L + ++ Q V ++
Sbjct: 205 RRACLHVHGVYPSLLLPQYDRSVSA---DQLAAQLEAVALRVLARQGTLVPTQQLVHNVR 261
Query: 156 ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYILQFC 214
I +F +YGY F ++ L +P + ++ D+L N V ++Q Y++H Y QF
Sbjct: 262 IAHRFNVYGYRPHAYAFYEVELIDPDLLPRVVDVLQNSTEVGGRQWQLYDAHYRYHTQFM 321
Query: 215 IDYNLYGMS 223
+ + + G++
Sbjct: 322 VRWRVSGIA 330
>gi|145342057|ref|XP_001416112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576336|gb|ABO94404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 982
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 92 VFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN--IALGYKDSVQ 149
+FG EG C VHG PY Y + E + A+ + LN ++ K++
Sbjct: 1 MFGVTKEGHSVCAHVHGFEPYFYA-----SVPENFGEADCAAFRRRLNEEVSAARKNAPG 55
Query: 150 -HVFHISICKKFPMYGYH-ADERTFLKILLYEPYHMSKLEDLLLNG----AVFNERFQPY 203
HV +S+ +K + Y +R F KI + P +S +L G V + F Y
Sbjct: 56 VHVVDVSLERKQSLMHYSDVKDRLFAKITMGLPNMVSAARGILEKGFSVPGVRDGAFTTY 115
Query: 204 ---ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
ES+I Y L+F +D + G + IEF + + ++ K SHCQ+E D+ + ++
Sbjct: 116 PTFESNIVYALRFMVDCAVVGGNWIEFPVNSYTVRAK----KASHCQIEVDIMYDKLI 169
>gi|324120754|dbj|BAJ78768.1| DNA polymerase delta catalytic subunit [Chrysoperla nipponensis]
Length = 1052
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYI------------PFHHEPITETMLQQLAASI 134
V VIR+FG ++G VHG Y Y+ PF E + M+Q + +
Sbjct: 64 VAVIRMFGITMDGHSVLCHVHGFLHYFYVVVPNAFDETHIKPF-KEALNTVMMQDMKNNS 122
Query: 135 DKALNIALGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG 193
D G K+ VQ V + +K + GY D ++ F +I + P ++ LL
Sbjct: 123 D-------GVKECVQDV---KLVEKLNLQGYVGDTKQKFAQIFVTLPKMVAAGARLLREA 172
Query: 194 AVFNE----RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHC 246
V+++ +QP+ES++ + ++F +D ++ G IE +R P K S C
Sbjct: 173 KVYDKFGYHDYQPFESNVDFDIRFMVDKHVKGCCWIELPSGTWRHRPSPLSPGVHKESRC 232
Query: 247 QLEADVKAESIVV 259
E DV ++
Sbjct: 233 NFEVDVSCNDLIA 245
>gi|452210573|ref|YP_007490687.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
gi|452100475|gb|AGF97415.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
Length = 926
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
++ PVIR+FG +GK C FV PY Y L AS D +A
Sbjct: 7 IVDSRPVIRLFGRGADGKSVCCFVPDFEPYFY---------------LKASGD-LHAVAR 50
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN-GAVFNER-- 199
KD+ + V + I +KF GY + L+I P + ++ D +L V
Sbjct: 51 LIKDTFEQVKKVEIIEKFEPVGYQKTKTKMLRITTSLPRDVPEIRDEVLKIQDVLKAEGD 110
Query: 200 FQPYESHIPYILQFCIDYNLYGM 222
+Q YES I + +F ID +L GM
Sbjct: 111 WQVYESDILFRNRFLIDRDLGGM 133
>gi|21228106|ref|NP_634028.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
gi|20906547|gb|AAM31700.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
Length = 933
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
++ PVIR+FG +GK C FV PY Y L AS D +A
Sbjct: 14 IVDSRPVIRLFGRGADGKSVCCFVPDFEPYFY---------------LKASGD-LHAVAR 57
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN-GAVFNER-- 199
KD+ + V + I +KF GY + L+I P + ++ D +L V
Sbjct: 58 LIKDTFEQVKKVEIIEKFEPVGYQKTKTKMLRITTSLPRDVPEIRDEVLKIQDVLKAEGD 117
Query: 200 FQPYESHIPYILQFCIDYNLYGM 222
+Q YES I + +F ID +L GM
Sbjct: 118 WQVYESDILFRNRFLIDRDLGGM 140
>gi|312100815|ref|XP_003149477.1| hypothetical protein LOAG_13925 [Loa loa]
gi|307755358|gb|EFO14592.1| hypothetical protein LOAG_13925 [Loa loa]
Length = 133
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALG 143
KVP+IR+FG G+K CV VHGVFPY+ I P ++L+ ++I N
Sbjct: 31 KVPIIRMFGILETGQKCCVHVHGVFPYIVIRTSVQFTPEFASLLRSKISTIVSDYNPR-- 88
Query: 144 YKDSVQH-VFHISICKKFPMYGYHADERTFLKILLYEPYHM 183
YK +V ++ I +YGYH + F++IL Y P +
Sbjct: 89 YKFNVNFAIYQIKSITARSLYGYHKNNENFVQILCYNPLQL 129
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 3 SMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLY 62
S+ VT D+++ KP ++LR KVP+IR+FG G+K CV VHGVFPY+
Sbjct: 5 SVRNVTCDYYLEKPNGF-----NKLRLHTNVKVPIIRMFGILETGQKCCVHVHGVFPYIV 59
Query: 63 I 63
I
Sbjct: 60 I 60
>gi|307189794|gb|EFN74067.1| Uncharacterized protein KIAA0226 [Camponotus floridanus]
Length = 966
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 299 MDPDVYSMQDLLDVKSGALYLKL---KDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQ 354
++P +Y LD K+ L KL KD + C +L +EP +++ DP VYS+Q
Sbjct: 813 LNPLLYRRIKQLD-KTRVLRTKLFFLKDFLFTCRFASSLQNMLKKEPDYIISDPHVYSIQ 871
Query: 355 DLLDVKSGALYLKLKDLVSACSSHVYNCE 383
DL+++K G LY+KL++LV C +H CE
Sbjct: 872 DLINIKFGVLYIKLQELVQICCAHTMECE 900
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 290 LLGQEP-HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSIFRMRAILL---GQEPHLL 345
+L +EP +++ DP VYS+QDL+++K G LY+KL++LV C M L G L
Sbjct: 853 MLKKEPDYIISDPHVYSIQDLINIKFGVLYIKLQELVQICCAHTMECELCQARGFVCELC 912
Query: 346 MDPDVYSMQDLLDV----KSGALY 365
DV DLL V K GA +
Sbjct: 913 CSKDVIFPWDLLKVIRCDKCGACF 936
>gi|403163479|ref|XP_003890201.1| hypothetical protein PGTG_21163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164316|gb|EHS62655.1| hypothetical protein PGTG_21163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 274
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQP--- 202
V+ V +S+ K ++GY D ++ FLKI+L + H+ E +N F E F
Sbjct: 86 GVKPVHSLSVAYKTSLWGYTGDTQSPFLKIVLTDFKHLDAFERGEVN---FREMFTACTT 142
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
++S+I Y L+F ID + GM+ +E +R +E L K S+CQ++ + AE+++
Sbjct: 143 FDSNIAYTLRFMIDKKVTGMNWLEVPPGSYRLRAE--LEKASNCQIKLETSAETLI 196
>gi|84043446|ref|XP_951513.1| DNA polymerase delta catalytic subunit [Trypanosoma brucei TREU927]
gi|33348312|gb|AAQ15638.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62359086|gb|AAX79533.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei]
gi|261326367|emb|CBH09326.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1026
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 85 QKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI---TETMLQQLAASIDKALNIA 141
+ VP++R++G EG V + P+L+I + + ++T +Q+L AS+D +++
Sbjct: 45 EDVPIVRIYGVTKEGHSVLVHCYNFEPHLWIRAPNRWLDVYSKTFVQELNASLDPLTHVS 104
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFN--- 197
V I K+ + Y+ D E +LK+++ P H+ +L LL +G +
Sbjct: 105 -------NTVVRIERHKRRSLMYYNPDGECDYLKVIVQLPQHIPRLRTLLSSGVMCVGAW 157
Query: 198 ---ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKA 254
F +ES++ + L+F +D N+ G + I +F S P+ S CQ+E
Sbjct: 158 EGLRAFPTFESNVIFPLRFMVDGNIGGCNWITVPAGQFHLFS----PRTSTCQIEVCCSH 213
Query: 255 ESIVVDMAAND 265
E + A D
Sbjct: 214 EVLQSHEAVGD 224
>gi|20089769|ref|NP_615844.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
gi|19914708|gb|AAM04324.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
Length = 937
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
PVIR+FG +GK C FV PY Y L AS D +A KD+
Sbjct: 20 PVIRLFGRGADGKSVCCFVPDFEPYFY---------------LKASGD-LHAVARLIKDT 63
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN-GAVFNER--FQPYE 204
+ V + I +KF GY ++ L++ P + ++ D +L V +Q YE
Sbjct: 64 FEQVKKVEIVEKFEPVGYQKTKKEMLRVTTRLPKDVPEIRDEILKIRDVLRAEGDWQVYE 123
Query: 205 SHIPYILQFCIDYNLYGM 222
S I + +F ID L GM
Sbjct: 124 SDILFRNRFLIDRALGGM 141
>gi|331221728|ref|XP_003323538.1| 4-nitrophenylphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 362
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQP--- 202
V+ V +S+ K ++GY D ++ FLKI+L + H+ E +N F E F
Sbjct: 86 GVKPVHSLSVAYKTSLWGYTGDTQSPFLKIVLTDFKHLDAFERGEVN---FREMFTACTT 142
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
++S+I Y L+F ID + GM+ +E +R +E L K S+CQ++ + AE+++
Sbjct: 143 FDSNIAYTLRFMIDKKVTGMNWLEVPPGSYRLRAE--LEKASNCQIKLETSAETLI 196
>gi|327305973|ref|XP_003237678.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
gi|326460676|gb|EGD86129.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
Length = 1699
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 27/98 (27%)
Query: 187 EDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR------------- 233
EDLLL GAV QPYESH+ +I Q+ DY+L+G + I + VKFR
Sbjct: 64 EDLLLQGAVMKRALQPYESHLQFIPQWMCDYSLHGCAYINCSKVKFRPPVPSYISLENPD 123
Query: 234 -------------SDSETSLPKLSHCQLEADVKAESIV 258
SD P+ SHC +E D+ + I+
Sbjct: 124 HFWHDESIPQRDISDP-NEFPRQSHCAIEVDIHVQDIL 160
>gi|70932597|ref|XP_737796.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513480|emb|CAH83259.1| hypothetical protein PC300406.00.0 [Plasmodium chabaudi chabaudi]
Length = 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP+IR++ G V VH FPY Y+ + + M+ +L + +++ L++ +K
Sbjct: 105 VPIIRIYSITNCGYSVLVNVHNFFPYFYVEKPNGFNNDDMI-KLESMLNENLSLNNQFKM 163
Query: 147 SVQHVFHISICKKFP-MYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQP--- 202
+ I K MY + + FLKI + P + L+ NG N +
Sbjct: 164 YENKILKIETVKTESIMYFKKSGKTDFLKITVLLPKMVPSLKKYFENGITVNSKHFGGVV 223
Query: 203 YESHIPYILQFCIDYNLYGMSNI--EFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
YE+++P+IL++ ID + G S I E N RS ++ S S+C E D+ E+I
Sbjct: 224 YEANLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQS----SNCTFEIDIHYENI 276
>gi|358253098|dbj|GAA52053.1| DNA polymerase zeta subunit [Clonorchis sinensis]
Length = 3068
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 9 IDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYI 63
+D++ SKP+ D +S+LR K+PVIR++G G+K C VHG P+L++
Sbjct: 690 LDYYFSKPLTDIDNSYSDLRGSYASKLPVIRLYGTTPSGQKVCANVHGYLPHLFV 744
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI 115
+S+LR K+PVIR++G G+K C VHG P+L++
Sbjct: 705 YSDLRGSYASKLPVIRLYGTTPSGQKVCANVHGYLPHLFV 744
>gi|443924628|gb|ELU43623.1| DNA polymerase delta catalytic subunit [Rhizoctonia solani AG-1 IA]
Length = 1003
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 98 EGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHIS 155
EG V PY YI P ++P + A +D L + + V I
Sbjct: 140 EGHSVLAHVTDFLPYFYIAMPRGYDP------NEARAFMDH-----LNGQTAPGTVLKIE 188
Query: 156 ICKKFPMYGYHADERT------FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPY 209
I K ++ Y + R FLKI L E ++ K+ D + +FN YES++P+
Sbjct: 189 IVHKRSLWSYRLNARAEDETSPFLKITLSEARNVPKVRDEYM--GLFNGPITTYESNMPF 246
Query: 210 ILQFCIDYNLYGMSNIE--FNMVKFRSDSETSLPKLSHCQLEADVK 253
L+F +D + GM+ +E + RSDS+ K+S CQ+E +++
Sbjct: 247 ELRFMVDREIVGMNWVEAPAGAYELRSDSQ----KISTCQIELNIR 288
>gi|164655413|ref|XP_001728836.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
gi|159102722|gb|EDP41622.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
Length = 970
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 92 VFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQHV 151
++G+ EG V VHG PY Y+ H P TM + LN G Q V
Sbjct: 1 MYGSTNEGNPVLVHVHGFLPYFYV---HAPRGFTM--SACPDLRNYLNTTFG----GQCV 51
Query: 152 FHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES---- 205
+S+ K + Y E FLKI + + ++ G + F + F E+
Sbjct: 52 AEVSLESKKNLMQYTGPENIAFLKITASDLRSLPRIRGAFERGEIAFRDLFVTGETCVSF 111
Query: 206 -HIPYILQFCIDYNLYGMSNIEF--NMVKFRSDSETSLPKLSHCQLEADVKAESI 257
+I Y L+F ID+N+ GM+ IE N RS +E +S CQ+E D +I
Sbjct: 112 DNIAYTLRFMIDHNIVGMNWIEIQANQYTLRSPNEC----ISRCQIELDCSPSAI 162
>gi|91773640|ref|YP_566332.1| replicative DNA polymerase I [Methanococcoides burtonii DSM 6242]
gi|91712655|gb|ABE52582.1| DNA polymerase B, delta subunit with exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 910
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P+IR+FG + +G+ C V G PY Y+ + LQ+L I K+
Sbjct: 17 PIIRIFGRSEDGESVCCLVPGFEPYFYLSASGD------LQKLGEEI----------KEQ 60
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
+ V I ++F GY ++ LK+ Y+P ++ ++ D + + N YE+ I
Sbjct: 61 FEGVKTFEIVERFEPIGYQETKKHMLKVTTYDPGNVPEIRDDVASMLGVN---AIYETDI 117
Query: 208 PYILQFCIDYNLYGMSNIEFNM 229
+ +F ID GM + M
Sbjct: 118 LFRNRFLIDKGFKGMDWVSTQM 139
>gi|389601339|ref|XP_001565217.2| putative DNA polymerase zeta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505002|emb|CAM36652.2| putative DNA polymerase zeta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 2981
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 100 KKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDK-ALNIAL---GYKDSVQHVFHIS 155
++ C+ VHGV+P L +P + ++ +QLAA ++ AL I + Q V +I
Sbjct: 70 RRACLHVHGVYPSLLLPQYDRNVSA---EQLAAQLEAVALRIFARQGTFVPGQQLVHNIR 126
Query: 156 ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA-VFNERFQPYESHIPYILQFC 214
I ++F +YGY F ++ L +P + ++ +L N V ++Q Y++H Y +QF
Sbjct: 127 IVRRFNVYGYRPHAHAFYEVELIDPDLLPRVVGVLQNSTEVGGRQWQLYDAHHGYHMQFM 186
Query: 215 IDYNLYGMS 223
+ + + G++
Sbjct: 187 VRWRVNGVA 195
>gi|425777959|gb|EKV16108.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425780068|gb|EKV18089.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1104
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIP-------FHHEPITETMLQQLAASIDKALNI 140
P IR+FG G+ C+ V G YLYI +P + Q+L S ++
Sbjct: 121 PAIRLFGVTEAGQSVCLHVTGFEHYLYIAAPVSFTKADCDPYKHFLEQKLGQSFTAISSV 180
Query: 141 ALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV---F 196
L ++++ YG+ ++++ ++KI + EP ++L L G+ +
Sbjct: 181 QLTMRENI--------------YGFQGNQKSYYIKITVTEPKLAARLRSALETGSGSMNY 226
Query: 197 NERFQPYES-----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
+ + +I Y+L+F ID L GM+ +E K+R ++ +LS+CQ+EA
Sbjct: 227 KGMWSGADGILTFDNIQYLLRFMIDTGLAGMAWVEAMAGKYRLLGQSQ--RLSNCQIEAC 284
Query: 252 VKAESIVV 259
V ++V
Sbjct: 285 VDYTNMVA 292
>gi|156089459|ref|XP_001612136.1| DNA polymerase family B family protein [Babesia bovis]
gi|154799390|gb|EDO08568.1| DNA polymerase family B family protein [Babesia bovis]
Length = 1478
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
S H+ + + + YGYH ++ F+K+ Y P + L + + QPYE H
Sbjct: 181 STAHIHRVDVVEHLLFYGYHTKKQKFIKVYHYNPAYTKYLAGYAYSSGIDGHLLQPYEVH 240
Query: 207 IPYILQFCIDYNLYGM 222
I Y + F DYNL GM
Sbjct: 241 ISYFMHFMSDYNLRGM 256
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 3 SMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLY 62
++ +V D+ MS+P FDP HS+ ++V VPVIR+FG+ G++ C+ VHG PY Y
Sbjct: 15 AVQLVYHDYVMSRP-TEFDPHHSDTGDVVTH-VPVIRIFGSTPAGQQVCLHVHGYLPYFY 72
Query: 63 I 63
+
Sbjct: 73 L 73
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI 115
V+ VPVIR+FG+ G++ C+ VHG PY Y+
Sbjct: 41 VVTHVPVIRIFGSTPAGQQVCLHVHGYLPYFYL 73
>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1159
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 72 ETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLA 131
T+ + +N V VPVIR++ +G V VH FPY Y+ E +L +L
Sbjct: 168 RTLFQNNEKNYV--SVPVIRIYTVTNDGYSVLVNVHNFFPYFYVEMPSHFDKEDLL-KLE 224
Query: 132 ASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLL 190
++ LN YK + + +I I K + Y D ++ FLKI + P + L+
Sbjct: 225 CMMNDNLNANSQYKIYDKKILNIEIVKTESLMYYKRDGKKDFLKITVLLPKMVPSLKKFF 284
Query: 191 -----LNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI--EFNMVKFRSDSETSLPKL 243
+NG YE+++P+IL++ ID + G S + + N R + K+
Sbjct: 285 ESVVNVNGKSIGGIV--YEANLPFILRYIIDKKITGSSWLLCKNNHFHIRPKHK----KI 338
Query: 244 SHCQLEADVKAESI 257
S+C E D+ E I
Sbjct: 339 SNCSFEIDISYEHI 352
>gi|336476181|ref|YP_004615322.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
gi|335929562|gb|AEH60103.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
Length = 905
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P+IR+FG +G+ C V G PY F+ P T +L ++++ N
Sbjct: 17 PIIRLFGRGDDGRSICCLVPGFEPY----FYARPSTVNSHDELIRALEQNFN-------- 64
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
+ + + +KF GY + LKI+ Y+P ++ ++ D +++ E YE+ I
Sbjct: 65 --SIKRVELVEKFEPVGYQKSRKKMLKIVTYDPQNVPEIRDDVVSFPGIEE---VYETDI 119
Query: 208 PYILQFCIDYNLYGM 222
+ ++ +D ++GM
Sbjct: 120 LFRNRYLVDQGIHGM 134
>gi|429962841|gb|ELA42385.1| hypothetical protein VICG_00484 [Vittaforma corneae ATCC 50505]
Length = 182
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 15/140 (10%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
P I +FGN ++ V V PYLYI +P E + L + I N A
Sbjct: 11 APTITIFGNTMDTTPIQVRVGDFIPYLYI----QPSVEISVDALQSFI--LGNFAKAKCL 64
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER---FQPY 203
++ V+ SI YGY + F K+ P + NG ++ F+ +
Sbjct: 65 GIEKVYKQSI------YGYSDKKSVFYKVYFNNPSSFRSAKAFFENGITLEQKKVKFKIF 118
Query: 204 ESHIPYILQFCIDYNLYGMS 223
ES+ PYIL+F D NL GMS
Sbjct: 119 ESNFPYILRFMNDLNLSGMS 138
>gi|396082048|gb|AFN83661.1| DNA polymerase catalytic subunit delta [Encephalitozoon romaleae
SJ-2008]
Length = 959
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT--ETMLQQLAASIDKALNIALGYK 145
PV +FGN GK V V FPY YI EP E + + SI +
Sbjct: 11 PVFSIFGNMKSGKPIQVLVRNFFPYFYI----EPANDKEYRKEDIKESIQRL-------- 58
Query: 146 DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG-AVFNE--RFQP 202
D V + K + GY ++ F K+ L + + L L +G ++ +E RF+
Sbjct: 59 DIKATVLEVEPVMKQTILGYTEGKKRFYKVTLNTSHSSAALRAFLESGISIRSEKVRFRV 118
Query: 203 YESHIPYILQFCIDYNLYGMS 223
YES P++L+F D + GMS
Sbjct: 119 YESGFPFVLRFMCDLGIVGMS 139
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 36 PVIRVFGNNIEGKKTCVFVHGVFPYLYI------PFHHEPITETIVHSELRNLVIQKVPV 89
PV +FGN GK V V FPY YI + E I E+I +++ V++ PV
Sbjct: 11 PVFSIFGNMKSGKPIQVLVRNFFPYFYIEPANDKEYRKEDIKESIQRLDIKATVLEVEPV 70
Query: 90 IR--VFGNNVEGKK 101
++ + G EGKK
Sbjct: 71 MKQTILG-YTEGKK 83
>gi|328710356|ref|XP_003244237.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Acyrthosiphon pisum]
Length = 859
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 321 LKDLVSACSIF-RMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
+KD + C R++ L + H+++ PD+YS+Q+L+DVK+G L KL++L+ C+ H+
Sbjct: 722 IKDFIFLCRYADRLKETLENMDAHIILKPDLYSIQNLVDVKNGELGKKLQNLIVVCNKHI 781
Query: 380 YNCEPTNA 387
NC+ A
Sbjct: 782 INCQLCQA 789
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 284 NSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACS 329
+ ++ L + H+++ PD+YS+Q+L+DVK+G L KL++L+ C+
Sbjct: 733 DRLKETLENMDAHIILKPDLYSIQNLVDVKNGELGKKLQNLIVVCN 778
>gi|324120758|dbj|BAJ78770.1| DNA polymerase delta catalytic subunit [Eretes sticticus]
Length = 998
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP++R+FG EG C +HG PY ++ + E+ Q +++ L IA +
Sbjct: 16 VPIMRMFGVTAEGNSVCCHIHGFSPYFFVSIPNN-FKESDCQPFKIKLNE-LAIADMRSN 73
Query: 147 SV---QHVFHISICKKFPMYGYHA-DERTFLKILL----YEPYHMSKLEDLLLNGAVFNE 198
+ + V + I +Y Y +ER F KI + + P LE+ + ++ +
Sbjct: 74 KINISEAVLMVEIVSGQSLYQYQGEEERQFAKITVALHRFIPACKRILENQNVYPSIGHW 133
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADVKAESI 257
F +ES++ ++F +D + G S IE K+ D ++L + CQ+E DV ++
Sbjct: 134 DFSSFESNVDIEMRFMVDTQVLGCSWIEIPPNKWTIRDYFSTLQPTTLCQIEIDVAYDAF 193
Query: 258 VV 259
+
Sbjct: 194 IA 195
>gi|84998308|ref|XP_953875.1| DNA polymerase delta catalytic subunit (Pold1 ) [Theileria
annulata]
gi|65304872|emb|CAI73197.1| DNA polymerase delta catalytic subunit (Pold1 homologue), putative
[Theileria annulata]
Length = 1088
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VPV+R++G E + V V PY YI E + E + L +K L+ +K
Sbjct: 68 EVPVVRLYGVTKEQQSVLVCVDDFQPYFYIEKPPELLEEN-FEDLKQLFNKHLSEQNQFK 126
Query: 146 DSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGA---VFNERF- 200
S++HV I + + Y + E+ FL+I++ P +S L + +G V + F
Sbjct: 127 KSLRHVLDIQKTRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSYIESGVELEVDGDSFT 186
Query: 201 -----QPYESHIPYILQFCIDYNL 219
Q YE+++PY+L+F +D N+
Sbjct: 187 IPLYRQTYEANLPYVLRFLLDNNV 210
>gi|322786675|gb|EFZ13059.1| hypothetical protein SINV_10025 [Solenopsis invicta]
Length = 875
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSIFRMRAILLGQEPH-LLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
LKD + AC L +EP+ ++ +P VYS+QDL++VK G LY+KL++LV C +H+
Sbjct: 746 LKDFLYACRFATSLQDGLKKEPNYIINEPHVYSIQDLINVKLGVLYVKLQELVQICCAHI 805
Query: 380 YNCE 383
+CE
Sbjct: 806 VDCE 809
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 291 LGQEPH-LLMDPDVYSMQDLLDVKSGALYLKLKDLVSAC 328
L +EP+ ++ +P VYS+QDL++VK G LY+KL++LV C
Sbjct: 763 LKKEPNYIINEPHVYSIQDLINVKLGVLYVKLQELVQIC 801
>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
Length = 1094
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE 120
+Y+P+ I+ S+ +N V VP+IR++ +G + VH FPY Y+ +
Sbjct: 99 IYMPYR-------ILLSKDKNYV--SVPIIRIYSLRKDGCSVLINVHNFFPYFYVEKPDD 149
Query: 121 PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFP-MYGYHADERTFLKILLYE 179
E ++ +L +++ LN+ YK + + I I K MY ++ FLKI +
Sbjct: 150 FDNEDLI-KLEMLMNENLNLNSQYKIYEKKILKIEIVKTESLMYFKKNGKKDFLKITVLL 208
Query: 180 PYHMSKLEDLLLNGAVFNERFQP---YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
P + L+ N + YE+++P+IL++ ID+ + G S I N K
Sbjct: 209 PKMVPSLKKYFEGIVHVNNKSIGGIVYEANLPFILRYIIDHKITGSSWI--NCKKGHYYI 266
Query: 237 ETSLPKLSHCQLEADVKAESI 257
K+S+C E D+ E +
Sbjct: 267 RNKNKKISNCTFEIDISYEHV 287
>gi|85014201|ref|XP_955596.1| DNA polymerase delta catalytic subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171290|emb|CAD27015.1| DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|449329935|gb|AGE96202.1| DNA polymerase delta catalytic large chain [Encephalitozoon
cuniculi]
Length = 974
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI-PFHHEPITETMLQQLAASIDKALNIALGYKD 146
PV +FGN G+ V FPY Y+ P + + E +++ +D I
Sbjct: 26 PVFSIFGNTKSGRPVRVLARNFFPYFYVEPSNGKEYKEEDIKESVQRLDVKATIL----- 80
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG-AVFNE--RFQPY 203
V+ V SI GY + ++ L P+ + L+ LL +G +V E RF+ Y
Sbjct: 81 EVEAVMKQSI------LGYTEGKTRVYRLTLNTPHVSTALKVLLESGISVKGEKVRFRVY 134
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFN 228
ES+ P++L+F D + GMS + N
Sbjct: 135 ESNFPFVLRFMCDLGIVGMSYLRVN 159
>gi|156081829|ref|XP_001608407.1| DNA polymerase zeta catalytic subunit [Plasmodium vivax Sal-1]
gi|148800978|gb|EDL42383.1| DNA polymerase zeta catalytic subunit, putative [Plasmodium vivax]
Length = 1866
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 44 NIEGKKTCVFVHGVFPYLYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTC 103
NI K T FV F + Y + + + ++ N I VI++ G + G+ C
Sbjct: 2 NIAEKPTAFFV-CKFLFFYYIYRKPSLPFDSLVCKINNRKIPHACVIQILGLSYYGQSVC 60
Query: 104 VFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQHV--FHISICKKFP 161
++VH V + + + Q L KA +D Q+V ++I KK
Sbjct: 61 LYVHDV---------NANLEAELCQFLEEEYGKAK------QDKTQNVCIYNIERVKKKC 105
Query: 162 MYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYG 221
+YGY + FLKI P+ ++ LL N ++ YE HI Y+L F N+YG
Sbjct: 106 IYGYKEEAEDFLKIYFLYPHTINYFASLLKKKLFKNRIWELYEVHISYMLHFLCSKNIYG 165
Query: 222 MSNI 225
S I
Sbjct: 166 CSEI 169
>gi|389745703|gb|EIM86884.1| hypothetical protein STEHIDRAFT_79581, partial [Stereum hirsutum
FP-91666 SS1]
Length = 1077
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
IR+FG G + V PY YIP + + + L+ + G
Sbjct: 105 TIRMFGVTEAGHSVLMHVTQFSPYFYIP-----VPRGFTNEDVNAFRDHLDASAG----- 154
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQ----P 202
V + + +K ++GY D+ F KI + +P + ++ + G F + F+
Sbjct: 155 -GVRAVELVQKRSLWGYKGDDLVMFAKITVTDPKALPRVRGVFERGECSFRDLFKGIVST 213
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
YES+I Y L+F ID + GM+ IE K+ + S K S CQ+E V+
Sbjct: 214 YESNIAYTLRFMIDTKVVGMNWIEVPAGKYMINKGKS--KKSQCQIEMTVR 262
>gi|221054277|ref|XP_002261886.1| dna polymerase zeta catalytic subunit [Plasmodium knowlesi strain
H]
gi|193808346|emb|CAQ39050.1| dna polymerase zeta catalytic subunit, putative [Plasmodium
knowlesi strain H]
Length = 1929
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 44 NIEGKKTCVFVHGVFPYLYI------PFHHEPITETIVHSELRNLVIQKVPVIRVFGNNV 97
NI K T FV + YI PF +P+ ++ N I V VI++ G +
Sbjct: 2 NITEKPTAFFVCKFLFFYYIYRKPFLPF--DPLV-----CKINNRKIPHVCVIQILGLSH 54
Query: 98 EGKKTCVFVHGVFP--YLYIPFHHEPITETML----QQLAASIDKALNIALGY--KDSVQ 149
G+ C++VH V ++ +P + ET L + + L G +D Q
Sbjct: 55 YGQSVCLYVHDVIKCTHISVPVNTYMCNETSFILADTNLEFELCQFLEEEYGKEKQDKTQ 114
Query: 150 HV--FHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
+V ++I KK +YGY + FLKI P+ + +LL N + YE HI
Sbjct: 115 NVCIYNIERVKKKCIYGYKEEPEEFLKIYFLYPHTIHYFANLLKRKLFKNRAWDLYEVHI 174
Query: 208 PYILQFCIDYNLYGMSNI 225
Y+L F N+YG S I
Sbjct: 175 SYMLHFLCSKNIYGCSEI 192
>gi|312093375|ref|XP_003147660.1| hypothetical protein LOAG_12098 [Loa loa]
Length = 618
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 188 DLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
D L A N FQ YESH+PYILQF ID++++GM + FN VKFR
Sbjct: 1 DALQREARKNSIFQVYESHVPYILQFFIDHSIFGMDLVNFNSVKFR 46
>gi|255549385|ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+IR+FG EG C VHG PY YI P P + QQ+ + +N +
Sbjct: 118 IIRIFGVTREGHSVCCNVHGFEPYFYISCPSGMGPDDISSFQQILEGRMREVNRSSKVPK 177
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG----AVFNERFQP 202
++ + + K+ MY + FLKI++ P ++ +L G + + F
Sbjct: 178 FIRRIEVVQ--KRSIMYYQQQESHPFLKIVVALPTVVASCRGILDKGIHIDGLGMKSFMT 235
Query: 203 YESHIPYILQFCIDYNLYGMSNIEF-NMVKFRSDSE 237
YES++ + L+F ID N+ G + IE N+V + + +
Sbjct: 236 YESNVLFALRFMIDCNVVGGNWIEVANLVTLQGEDK 271
>gi|83282608|ref|XP_729844.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii
17XNL]
gi|23488820|gb|EAA21409.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii]
Length = 1097
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VP+IR++ G V VH FPY Y+ + + M+ +L + +++ L++ +K
Sbjct: 119 VPIIRIYSITNCGYSVVVNVHNFFPYFYVEKPNGFNNDDMI-KLESMLNETLSLNNQFKM 177
Query: 147 SVQHVFHISICKKFP-MYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQP--- 202
+ I K MY + + FLKI + P + L+ +G N +
Sbjct: 178 YENKILKIETVKTESIMYFKKSGKTDFLKITVLLPKMVPSLKKFFESGINVNSKHFGGIV 237
Query: 203 YESHIPYILQFCIDYNLYGMSNI--EFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
YE+++P+IL++ ID + G S I E N RS ++ S S+C E D+ E+I
Sbjct: 238 YEANLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQS----SNCTFEIDIHYENI 290
>gi|367000613|ref|XP_003685042.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
gi|357523339|emb|CCE62608.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
Length = 1096
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
++R FG EG V G YLY+ P E + L I++ L+
Sbjct: 135 IVRFFGVTQEGHSILCNVTGFKHYLYVPSPIAQEQTDKQDLDGFVKYINEQLD------- 187
Query: 147 SVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-----AVFNERF 200
V I I ++ ++GY D + F K+ L P+ ++KL G + F+
Sbjct: 188 --NCVDSIEITQRQSIWGYSGDTKLPFWKVYLKNPHMINKLRTSFEKGYFTYKSWFSNGT 245
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
Y+ +I Y L+ ID + GMS I K++ +E + K+S+CQLE + ++
Sbjct: 246 TTYD-NIAYTLRLMIDCGIVGMSWITLPKSKYKLITEQN--KISNCQLEVSINYRDLISH 302
Query: 261 MAAND 265
A D
Sbjct: 303 PAEGD 307
>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
Length = 1115
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 63 IPFHHEPITETIVHSELR---NLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP--- 116
+P + +TE +V ++ ++ P +++FG +G + V G Y Y+
Sbjct: 94 LPADYNELTEKLVFQQIEAEEGVLNGGRPTVKLFGVTEDGHSVLLHVTGFLHYFYVAAPM 153
Query: 117 -FHHEPIT--ETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-F 172
FH + +T L+ A K +N SVQ +I + + ++++ +
Sbjct: 154 NFHKDDCQPYKTFLE---AECQKQMNQHSAIIASVQMTMRENILR------FQGNQKSPY 204
Query: 173 LKILLYEPYHMSKLEDLLLNGAVFNERFQPYES-------HIPYILQFCIDYNLYGMSNI 225
LKI + +P H+ ++ L+ G +R P +I Y+L+F ID + GMS +
Sbjct: 205 LKITVNDPKHIGRVRTLVQKGFANYKRLWPASDGGILTFDNIAYVLRFMIDTKVAGMSWV 264
Query: 226 EFNMVKFRSDSETSLPKLSHCQLEADV 252
E K+R + + S+CQ+EA +
Sbjct: 265 EVPAGKYRMIEQRD--RHSNCQIEAQM 289
>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
Length = 932
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 21/139 (15%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN-IALGYKD 146
PVIR+FG V+GK C FV PY Y L AS D LN +A ++
Sbjct: 20 PVIRLFGRGVDGKSVCCFVPDFEPYFY---------------LKASGD--LNAVARLIEE 62
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED--LLLNGAVFNE-RFQPY 203
+ V + I +KF GY + L++ + P + ++ D L L + E +++ Y
Sbjct: 63 TFTQVKKVEIVEKFEPIGYQKTKIKMLRVTTHLPREVPEIRDEILKLQEVLKAEGKWEVY 122
Query: 204 ESHIPYILQFCIDYNLYGM 222
E+ I + +F ID +L GM
Sbjct: 123 ETDILFRNRFLIDKDLGGM 141
>gi|399219112|emb|CCF75999.1| unnamed protein product [Babesia microti strain RI]
Length = 977
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 82 LVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFHHEPITETMLQQLAASI 134
+++ ++ ++R++G + + ++ +PY YI P H E +T + + L +
Sbjct: 1 MMLTEISIVRIYGVMKDHSSILLNIYNFWPYFYIKMPPNFIPHHIEKLTILLNEYLKSQ- 59
Query: 135 DKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG 193
+K S V I I KK + Y D FLKI + P +S L + NG
Sbjct: 60 --------HFKKSRLFVVKIEIVKKQSLMFYSPDNSIDFLKITVALPRMVSTLRTFIENG 111
Query: 194 AVFNERFQP--YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQL 248
Q +E+++PY+++F +D +++G ++ + T +PK SHC L
Sbjct: 112 ISIKGNIQRMVFEANLPYVMRFLLDCSIFGGCWLKVS-------DYTIIPKHQQSSHCSL 164
Query: 249 EADVKAESIVVDMAANDSDVATSGGITRYLS 279
E D+ S++ A + S S G R LS
Sbjct: 165 EIDLDYNSVI---ALDVSGEWISLGAIRILS 192
>gi|336368221|gb|EGN96564.1| hypothetical protein SERLA73DRAFT_58496 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1084
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 24/176 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
++R+FG G +V PY YI + +N +LG
Sbjct: 101 MLRMFGVTEAGHSVLAYVTDFLPYFYIA-----VPRGFQNDDKEDFRNHINTSLGG---- 151
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV--------FNER 199
V +I ++ ++GY D+ FLK+ + +P + K+ D ++ +
Sbjct: 152 SFVVNIESVQRRNLWGYRGDDWVAFLKLTICDPKTLPKVRDKYISQGECHFQSLFPIGQA 211
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--SDSETSLPKLSHCQLEADVK 253
+ES+IPY L+F ID + GM+ IE K++ D E K S CQ+E V+
Sbjct: 212 VSTFESNIPYALRFMIDTKVVGMNWIEIPAGKYKIMPDKE----KHSQCQVELRVR 263
>gi|448522872|ref|XP_003868799.1| Rev3 protein [Candida orthopsilosis Co 90-125]
gi|380353139|emb|CCG25895.1| Rev3 protein [Candida orthopsilosis]
Length = 1719
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 88/232 (37%), Gaps = 56/232 (24%)
Query: 32 IQKVPVIRVFG------------------------NNIEGKKTCVF-----VHGVFPYLY 62
+ +VP+IRV+G N +T VF +H +PY Y
Sbjct: 103 VSQVPIIRVYGSLSFEEKVFSSNSSTMNKKQKLIVNQQTHPRTLVFNVVLHIHNFYPYFY 162
Query: 63 IPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI 122
+ H + + L L+ V++ G+K + +
Sbjct: 163 VDCHEQDYQKLQSRQYLEKLINHLEVVVKESFKRRRGRKGT--------------EEQEL 208
Query: 123 TETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
M ++ D+ + +++ ++S+CK P+YG+ + F KI L P +
Sbjct: 209 ENAMEEEQEDKDDEKDIDGNEKPNLRKYIANVSVCKAVPIYGFQIGYKLFYKISLLSPLY 268
Query: 183 MSKLEDLLLNGAVFNERF-QP------------YESHIPYILQFCIDYNLYG 221
++L + + F QP YE+H+PY+LQF D+NL+G
Sbjct: 269 KNRLARMFQENKINLHHFDQPNETKKNATPTYVYEAHLPYLLQFLTDFNLFG 320
>gi|270007686|gb|EFA04134.1| hypothetical protein TcasGA2_TC014378 [Tribolium castaneum]
Length = 866
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSIFR-MRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
LKD + AC +R L ++ +LL DP+VYSM+DL++V++G + L+LK L+ C H
Sbjct: 755 LKDFIFACRFAESIRERLEQEKSYLLTDPEVYSMEDLVNVRNGDMKLRLKYLIEVCCRHT 814
Query: 380 YNCE 383
C+
Sbjct: 815 SECK 818
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 277 YLSDVLL-----NSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSAC 328
YL D + S+R L ++ +LL DP+VYSM+DL++V++G + L+LK L+ C
Sbjct: 754 YLKDFIFACRFAESIRERLEQEKSYLLTDPEVYSMEDLVNVRNGDMKLRLKYLIEVC 810
>gi|407045124|gb|EKE43021.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
nuttalli P19]
Length = 1077
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYKD 146
PV+ ++G EG VHG PY YI E T+ L +L ++ L+ + D
Sbjct: 71 PVLYLYGTTNEGDSVLAMVHGYKPYFYISVEKE-YTQQELDELKLKCNQQLHSEVKATGD 129
Query: 147 SVQHVFHI-SICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER-FQPY 203
Q++ H+ +I + Y+ ++ F+KI L P ++ L +L N R +Q Y
Sbjct: 130 FEQYILHMENIKNHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNNRQYQTY 189
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
E+ + ++L+F +D L G S ++ ++ + + K+S CQ E
Sbjct: 190 EADLLFVLRFMVDSGLVGCSWVKVPAKRYVLVKDEA-NKISRCQHE 234
>gi|189237491|ref|XP_971399.2| PREDICTED: similar to Uncharacterized protein KIAA0226 [Tribolium
castaneum]
Length = 884
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSIFR-MRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
LKD + AC +R L ++ +LL DP+VYSM+DL++V++G + L+LK L+ C H
Sbjct: 755 LKDFIFACRFAESIRERLEQEKSYLLTDPEVYSMEDLVNVRNGDMKLRLKYLIEVCCRHT 814
Query: 380 YNCE 383
C+
Sbjct: 815 SECK 818
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 277 YLSDVLL-----NSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSAC 328
YL D + S+R L ++ +LL DP+VYSM+DL++V++G + L+LK L+ C
Sbjct: 754 YLKDFIFACRFAESIRERLEQEKSYLLTDPEVYSMEDLVNVRNGDMKLRLKYLIEVC 810
>gi|324500650|gb|ADY40299.1| DNA polymerase delta catalytic subunit [Ascaris suum]
Length = 1091
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI----PFHHEPITETMLQQLAASIDKALNIALGY 144
V+R+FG +++G CV VH PY Y+ F E I E + L ++ A + +G
Sbjct: 100 VVRLFGVSMDGNSLCVQVHAFVPYFYVLVGDSFLPEYI-ERAKKVLNDNVKNAASSGIGI 158
Query: 145 KDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEP--YHMSKL---EDLLLNGAVFN 197
V++ V + + +YGY + ++ FLK+ + P + + + E + L G
Sbjct: 159 PKGVENLVVDLELTTGADIYGYRKNLKQKFLKVFVRTPKLFPICRRIFQEGIDLYGKGER 218
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
+E+++ + ++F +D L G + K+ E + +S CQLE +K +
Sbjct: 219 SSLSCFEANVDFEIRFMVDLGLVGCGWVVLPSRKYDVVPEGQM--VSRCQLECTIKFTDV 276
Query: 258 VV 259
VV
Sbjct: 277 VV 278
>gi|66475912|ref|XP_627772.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5'
exonuclease; RNAseH fold [Cryptosporidium parvum Iowa
II]
gi|32399018|emb|CAD98258.1| DNA polymerase family B subunit, probable [Cryptosporidium parvum]
gi|46229188|gb|EAK90037.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5'
exonuclease; RNAseH fold [Cryptosporidium parvum Iowa
II]
Length = 1084
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 30/194 (15%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKALNIALG 143
+ P+I++FG+ G + +H FPYLY +P P E + Q I+ L G
Sbjct: 98 ETPIIQLFGSTSTGITVLINIHCFFPYLYCEVPKSTPPNPEKIKTQ----IESGLGATEG 153
Query: 144 YKDSVQHVFHISICKKFPMYGYHAD----ERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
++V ++ + KK + Y D + F KI L P + ++ NG + +
Sbjct: 154 -----KNVLNVQVLKKESIMHYKGDSEIEDSQFYKITLQLPNLVPTCRSMIENGNL-DCI 207
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNI--------------EFNMVKFRSDSETSLPKLSH 245
Q YE++IP+IL++ ID +L S + EF+ + ++S
Sbjct: 208 PQAYEANIPFILRYLIDRDLSTGSWVSIPKQKSYIRLGGQEFDFKDAGFVRISPFQRISS 267
Query: 246 CQLEADVKAESIVV 259
CQ+E D+ + ++V
Sbjct: 268 CQIEMDLFYDDLIV 281
>gi|167380902|ref|XP_001735501.1| DNA polymerase delta catalytic subunit [Entamoeba dispar SAW760]
gi|165902501|gb|EDR28305.1| DNA polymerase delta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1077
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYKD 146
PV+ ++G EG VHG PY YI E T+ L +L ++ L+ + D
Sbjct: 71 PVLYLYGTTNEGDSVLAMVHGYKPYFYISVEKE-YTQQELDELKMKCNQQLHSEVKATGD 129
Query: 147 SVQHVFHISICKKF-PMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER-FQPY 203
Q++ + K + + Y+ ++ T F+KI L P ++ L +L N R +Q Y
Sbjct: 130 FEQYILLMENVKGYHSLMNYNFEKETFFVKITLRLPKYVPVLRHILQETQRINNRHYQTY 189
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
E+ + ++L+F +D L G S ++ ++ + + K+S CQ E
Sbjct: 190 EADLLFVLRFMVDAGLVGCSWVKVPAKRYILVKDEA-NKISRCQHE 234
>gi|332018666|gb|EGI59238.1| Uncharacterized protein [Acromyrmex echinatior]
Length = 939
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSI-FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
LKD + AC ++ +L + +++ DP VYS+QDL++VK G L+++L++LV C +H+
Sbjct: 810 LKDFLFACRFATSLQDVLKKESNYIINDPHVYSIQDLINVKLGVLFVRLQELVQICCAHI 869
Query: 380 YNCE 383
+CE
Sbjct: 870 VDCE 873
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 33/44 (75%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSAC 328
S++ +L + +++ DP VYS+QDL++VK G L+++L++LV C
Sbjct: 822 SLQDVLKKESNYIINDPHVYSIQDLINVKLGVLFVRLQELVQIC 865
>gi|426196824|gb|EKV46752.1| hypothetical protein AGABI2DRAFT_186127 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGYK 145
IR++G EG + PY YI F E +T + LN +G
Sbjct: 108 IRMYGVTQEGHSVMALITDFLPYFYIAVPRGFQDEDMT---------AFKGYLNQTVG-S 157
Query: 146 DSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYE 204
+ VQ V + K ++GY D++ +FLK+ + +P + G +E +E
Sbjct: 158 NVVQKVEKFA---KRTLWGYRGDDKVSFLKLTISDP------KKCQFQGLFPSEPVPTFE 208
Query: 205 SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
S+I + L+F ID + GM+ IE K++ TS K SHCQ+E ++ ++ +
Sbjct: 209 SNIVFTLRFMIDTKVVGMNWIEVPPGKYK--LVTSQHKRSHCQIELRMRYDAFI 260
>gi|307196023|gb|EFN77748.1| Uncharacterized protein KIAA0226 [Harpegnathos saltator]
Length = 960
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
LKD + C +L +EP +++ DP VYS+QDL+ VK G L+++L++LV C +H+
Sbjct: 831 LKDFLFTCRFSTSLQDVLKKEPNYIISDPHVYSIQDLIHVKFGVLFVRLQELVGVCCAHI 890
Query: 380 YNCE 383
+CE
Sbjct: 891 ADCE 894
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSAC 328
S++ +L + +++ DP VYS+QDL+ VK G L+++L++LV C
Sbjct: 843 SLQDVLKKEPNYIISDPHVYSIQDLIHVKFGVLFVRLQELVGVC 886
>gi|307110156|gb|EFN58392.1| DNA polymerase delta subunit [Chlorella variabilis]
Length = 1011
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI-------DK 136
+++VPV+R+FG G FVHG PY Y+ + Q LAA + DK
Sbjct: 25 LKEVPVVRMFGVTEAGNSVAAFVHGFEPYFYVDAPSAAFSPDDCQALAAELNALLAGRDK 84
Query: 137 ALNIALGYKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAV 195
+ N + + + +K M Y R FLKI+L P ++ + L G
Sbjct: 85 SRN--------PRQCLRVELARKQTMMYYQPQPSRLFLKIVLSVPTLVTTCKKLFEEGIS 136
Query: 196 FNE-------RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
R YES++ Y L+F ID ++ G + +E + + +HCQL
Sbjct: 137 LKWMGNGKYYRSTTYESNVLYALRFMIDCSVVGGNWVELPAGSYMLVAPQG--HQTHCQL 194
Query: 249 EADVKAESIV 258
EA + +V
Sbjct: 195 EAHLNYSELV 204
>gi|303390605|ref|XP_003073533.1| DNA polymerase catalytic subunit delta [Encephalitozoon
intestinalis ATCC 50506]
gi|303302680|gb|ADM12173.1| DNA polymerase catalytic subunit delta [Encephalitozoon
intestinalis ATCC 50506]
Length = 959
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 25/145 (17%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
PV +FGN G+ V V FPY YI ET+ + D KDS
Sbjct: 11 PVFAIFGNIESGEPIQVLVKNFFPYFYI--------ETVNGKEYKEED--------IKDS 54
Query: 148 VQH------VFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE--- 198
+Q V + K + GY + F K+ L P+ L L +G
Sbjct: 55 IQRLDIKATVVEVEATMKQTILGYTEGKSRFYKLTLNTPHVSGALRAFLESGITIRREKV 114
Query: 199 RFQPYESHIPYILQFCIDYNLYGMS 223
RF+ YES P++L+F D + GMS
Sbjct: 115 RFRVYESSFPFVLRFMCDLGIVGMS 139
>gi|307106794|gb|EFN55039.1| hypothetical protein CHLNCDRAFT_24095 [Chlorella variabilis]
Length = 192
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGV 57
F M +V+++ M+ P+ D SEL +Q+VPV+R++G+ G+K C+ +H V
Sbjct: 27 FVMRVVSLEHCMAAPLPGVDTCWSELAGCAVQQVPVVRIYGSTPAGQKCCLHLHKV 82
>gi|261200399|ref|XP_002626600.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
gi|239593672|gb|EEQ76253.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1106
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 29/195 (14%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYK 145
P +++FG G + V YLY+ P P T + A ++K +++
Sbjct: 125 PAVKLFGVTEAGHSVLLHVTHFLHYLYVAAPVSFAP---TDCEGFKAYLEKEIDLHQPAL 181
Query: 146 DSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPY 203
SVQ V + ++G+ ++++ +LKI + +P H++KL L+ G A + ++
Sbjct: 182 HSVQMVMREN------LFGFQGNQKSPYLKITVTDPRHINKLRTLIETGQANYKGMWRGN 235
Query: 204 ES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKA 254
+ +I YIL+F ID + GMS +E K+ LP +LS+CQ+EA +
Sbjct: 236 DDGILTFDNIEYILRFMIDTGISGMSWVEAPASKYH-----MLPMNERLSNCQIEATIHY 290
Query: 255 ESIVVDMAANDSDVA 269
++ ND + A
Sbjct: 291 RDLIAH--PNDGEWA 303
>gi|239607450|gb|EEQ84437.1| DNA polymerase delta subunit [Ajellomyces dermatitidis ER-3]
Length = 1106
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 29/195 (14%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYK 145
P +++FG G + V YLY+ P P T + A ++K +++
Sbjct: 125 PAVKLFGVTEAGHSVLLHVTHFLHYLYVAAPVSFAP---TDCEGFKAYLEKEIDLHQPAL 181
Query: 146 DSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPY 203
SVQ V + ++G+ ++++ +LKI + +P H++KL L+ G A + ++
Sbjct: 182 HSVQMVMREN------LFGFQGNQKSPYLKITVTDPRHINKLRTLIETGQANYKGMWRGN 235
Query: 204 ES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKA 254
+ +I YIL+F ID + GMS +E K+ LP +LS+CQ+EA +
Sbjct: 236 DDGILTFDNIEYILRFMIDTGISGMSWVEAPASKYH-----MLPMNERLSNCQIEATIHY 290
Query: 255 ESIVVDMAANDSDVA 269
++ ND + A
Sbjct: 291 RDLIAH--PNDGEWA 303
>gi|357613119|gb|EHJ68324.1| DNA polymerase delta catalytic subunit [Danaus plexippus]
Length = 974
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 97 VEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKA-LNIALGYKDSVQH-VF 152
+EG C VHG PY Y +P + + E+ +L ++++KA L KD+++ V
Sbjct: 1 MEGNSVCCHVHGFTPYFYVTVPLNFK---ESNCHELKSNLNKAILEDLRSNKDNIRETVL 57
Query: 153 HISICK-KFPMYGYHADERTFLKILLYEPYHMSKLEDLL----LNGAVFNERFQPYESHI 207
+ + K K MY + D+ TF ++ + P ++ + L+ + + N F YE++I
Sbjct: 58 EVKLVKAKSIMYYKNDDDTTFARVSVALPKLIAAAKRLIERQPTSFGLMNPSF--YETNI 115
Query: 208 PYILQFCIDYNLYGMSNIEFNMVKF--RSDSETSLPKLSHCQLEADV 252
+ ++F +D ++ G S IE K+ R+ + P+ S CQ+E DV
Sbjct: 116 DFDIRFMVDTSVVGCSWIELPPGKWSLRTKDNSVKPE-SRCQIEVDV 161
>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1066
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGY 144
+R+FG +G + PY YI F +E + M + L ++ L
Sbjct: 85 TLRMFGVTQDGHSVLAHITDFLPYFYIATPRGFGNEDVGPFM-RYLNNAVPGGL------ 137
Query: 145 KDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLED-------LLLNGA-- 194
V + + KK ++GY D+ +F+KI + + + K+ D LL G
Sbjct: 138 ------VRDMELTKKRSLWGYKGDDWVSFIKITVADQRSLPKVRDKSSDSPRLLERGECR 191
Query: 195 ---VFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKF----RSDSETSLPKLSHCQ 247
+FN +ES+I Y L+F ID + GM+ IE ++ D K SHCQ
Sbjct: 192 FNDLFNGEVATFESNIAYTLRFMIDTRVVGMNWIEVPAGQYIILEGKD------KRSHCQ 245
Query: 248 LEADVKAESIV 258
LE VK +
Sbjct: 246 LELSVKWNKFI 256
>gi|170104866|ref|XP_001883646.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641281|gb|EDR05542.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKDS 147
+R+FG +G V PY YI P + +Q S+ +
Sbjct: 91 LRMFGVTEDGHSVLAHVTDFPPYFYIGVPRGFQDGDIESFRQYLNSVTQGC--------- 141
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLL-LNG-----AVFNERF 200
V I K ++GY D+ FLK ++ EP + K+ D L G +FN+
Sbjct: 142 ---VRRIERVSKRTLWGYRGDDWIPFLKFIITEPRSLPKVRDEYPLRGECDFQGLFNDVV 198
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ES+I Y L+F ID + GM+ IE K+ S K S CQLE ++ ++ +
Sbjct: 199 PTFESNIAYTLRFMIDTKVVGMNWIEVPAGKYNIYSPDK--KRSTCQLEFGMRYDAFI 254
>gi|354548042|emb|CCE44777.1| hypothetical protein CPAR2_405800 [Candida parapsilosis]
Length = 1698
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV-FNERFQP----- 202
+++ ++SICK P+YG+ + F KI L P + ++L + + + QP
Sbjct: 195 KYIANVSICKAVPIYGFQLGYKLFYKISLLSPLYKNRLARMFQENKISLHNLDQPGGAKE 254
Query: 203 -------YESHIPYILQFCIDYNLYG 221
YE+H+PY+LQF D+NL+G
Sbjct: 255 SGAATYVYEAHLPYLLQFLTDFNLFG 280
>gi|8810239|gb|AAF80111.1|AF268042_2 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHDVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + + ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKITFADYFAAREVGRMLE-----AQK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+++ + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETNVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCSVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|402583363|gb|EJW77307.1| hypothetical protein WUBG_11783, partial [Wuchereria bancrofti]
Length = 238
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI----PFHHEPITETMLQQLAASIDKALNIALGY 144
VIR+FG CV VHG PY Y+ F E I E + L + + +G
Sbjct: 70 VIRLFGATANQNSICVQVHGFLPYFYVLLESRFDEEHI-EYAKKYLNDIVKAQVPANIGI 128
Query: 145 KDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVF-----N 197
+V++ V +SI +Y Y D + FLK+ + P ++ + NG
Sbjct: 129 SKNVENLVVDLSIVHGASIYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVNLIKGGQM 188
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
E +E++I + ++F D+NL G + + K+R + +S CQ E
Sbjct: 189 ESLSCFETNIDFEIRFMTDHNLVGCAWVTLPSEKYRIVEGKDM--ISRCQFE 238
>gi|337732501|gb|AEI71773.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHDVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + Y ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKI-TFTDYFAAREAGRMLEA----QK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+ + + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCSVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|218185393|gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
Length = 1087
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
++R+FG EG C VHG PY YI P P + Q +++ + + +
Sbjct: 131 ILRIFGVTREGHSVCCQVHGFEPYFYISCPMGMGPDDISRFHQ---TLEGRMKDSNRNSN 187
Query: 147 SVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG----AVFNERFQ 201
+ V I + +K + Y + + FLKI++ P ++ +L G + ++ F
Sbjct: 188 VPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPTMVASCRGILERGITIEGLGSKSFL 247
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKF 232
YES+I + L+F ID N+ G + IE K+
Sbjct: 248 TYESNILFALRFMIDCNIVGGNWIEVPAGKY 278
>gi|449709355|gb|EMD48635.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1077
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYKD 146
PV+ ++G EG VHG PY YI E T+ L +L ++ L+ + D
Sbjct: 71 PVLYLYGTTNEGDSVLAMVHGYKPYFYISVEKE-YTQQELDELKMKCNQQLHSEVKATGD 129
Query: 147 SVQHVFHI-SICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER-FQPY 203
Q++ ++ +I + Y+ ++ F+KI L P ++ L +L N R +Q Y
Sbjct: 130 FEQYILNMENIKNHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNNRHYQTY 189
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
E+ + ++L+F +D L G S ++ ++ + + K+S CQ E
Sbjct: 190 EADLLFVLRFMVDSGLVGCSWVKVPAKRYVLVKDEA-NKISRCQHE 234
>gi|67478112|ref|XP_654477.1| DNA polymerase delta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56471523|gb|EAL49087.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1077
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL-GYKD 146
PV+ ++G EG VHG PY YI E T+ L +L ++ L+ + D
Sbjct: 71 PVLYLYGTTNEGDSVLAMVHGYKPYFYISVEKE-YTQQELDELKMKCNQQLHSEVKATGD 129
Query: 147 SVQHVFHI-SICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNER-FQPY 203
Q++ ++ +I + Y+ ++ F+KI L P ++ L +L N R +Q Y
Sbjct: 130 FEQYILNMENIKNHHSLMNYNFEKEVFFIKITLRLPKYVPLLRHILQETQRVNNRHYQTY 189
Query: 204 ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
E+ + ++L+F +D L G S ++ ++ + + K+S CQ E
Sbjct: 190 EADLLFVLRFMVDSGLVGCSWVKVPAKRYVLVKDEA-NKISRCQHE 234
>gi|67900676|ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|40742186|gb|EAA61376.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|259483322|tpe|CBF78614.1| TPA: catalytic subunit of DNA polymerase delta (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1044
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P IR+FG G+ + V G YLYI P+ T ++ L +G
Sbjct: 120 PAIRLFGVTEAGQSVLLHVTGFQHYLYIA---APVGFT--KEDCDPYRAFLESKIGQFPP 174
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV---FNERFQPY 203
V + + I + +YG+ ++++ +LKI + EP H+SKL L A + +
Sbjct: 175 V--IQSVQITMRENIYGFQGNKKSYYLKITVTEPRHISKLRSALETKAQTVNYKGLWTNA 232
Query: 204 ES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP--KLSHCQLEADVKAE 255
+ +I Y+L+F ID ++ GMS +E K+ E P K+S+CQLEA +
Sbjct: 233 DGGILTFDNIQYLLRFMIDTDIQGMSWVEAPAGKY----ELIAPQDKVSNCQLEARIDYR 288
Query: 256 SIV 258
S++
Sbjct: 289 SLI 291
>gi|350645123|emb|CCD60184.1| DNA polymerase zeta catalytic subunit, putative [Schistosoma
mansoni]
Length = 243
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
S+ I ++D++ S P D +S+ ++PVIRV+G G+K C VHGV PY+
Sbjct: 6 LSIKIFSLDYYFSLPNDLLDIGYSKFARCYSHRIPVIRVYGTTHTGQKICANVHGVLPYI 65
Query: 62 YI 63
+I
Sbjct: 66 FI 67
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH-EPITETMLQQLAA 132
I +S+ ++PVIRV+G G+K C VHGV PY++I + + + +Q
Sbjct: 26 IGYSKFARCYSHRIPVIRVYGTTHTGQKICANVHGVLPYIFIELPNVDSDLDDFVQSFVL 85
Query: 133 SIDKALNIALG 143
S++K++ L
Sbjct: 86 SLEKSIRTKLS 96
>gi|222615647|gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
Length = 1100
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
++R+FG EG C VHG PY YI P P + Q +++ + + +
Sbjct: 131 ILRIFGVTREGHSVCCQVHGFEPYFYISCPMGMGPDDISRFHQ---TLEGRMKDSNRNSN 187
Query: 147 SVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNG----AVFNERFQ 201
+ V I + +K + Y + + FLKI++ P ++ +L G + ++ F
Sbjct: 188 VPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPTMVASCRGILERGITIEGLGSKSFL 247
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKF 232
YES+I + L+F ID N+ G + IE K+
Sbjct: 248 TYESNILFALRFMIDCNIVGGNWIEVPAGKY 278
>gi|363753924|ref|XP_003647178.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890814|gb|AET40361.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1092
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI-DKALNIALGYKDS 147
V+R FG G V G Y+Y+P + L+ L + DK N+ DS
Sbjct: 132 VVRFFGVTDAGNSVLCNVTGFKHYMYVPAPSGFRPSSDLKVLKDYLNDKFDNVV----DS 187
Query: 148 VQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV------FNERF 200
++ V+ SI +GY DE+ FLK+L+ +PY ++K+ G V F
Sbjct: 188 IEVVWKQSI------WGYSGDEKLQFLKVLVPDPYGLNKVRTAFEKGYVNPNDTWFQGGT 241
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKAESI 257
Y+ +I + L+ ID + GMS I K+ T +P K+S CQ E + + +
Sbjct: 242 TTYD-NIAFTLRLMIDCGIVGMSWITLPKGKY-----TLIPKHQKVSSCQFEVAINYKDL 295
Query: 258 VVDMAAND 265
+ A D
Sbjct: 296 IAHPAEGD 303
>gi|327352438|gb|EGE81295.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1106
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 29/195 (14%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYK 145
P +++FG G + V YLY+ P P T + A ++K +++
Sbjct: 125 PAVKLFGVTEAGHSVLLHVTHFLHYLYVAAPVSFAP---TDCEGFKAYLEKEIDLHQPAL 181
Query: 146 DSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPY 203
SVQ V + ++G+ ++++ +LKI + +P H++KL L+ G A + ++
Sbjct: 182 HSVQMVMREN------LFGFQGNQKSPYLKITVTDPRHINKLRMLIETGQANYKGMWRGN 235
Query: 204 ES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKA 254
+ +I YIL+F ID + GMS +E K+ LP +LS+CQ+EA +
Sbjct: 236 DDGILTFDNIEYILRFMIDTGISGMSWVEAPASKYH-----MLPMNERLSNCQIEATIHY 290
Query: 255 ESIVVDMAANDSDVA 269
++ ND + A
Sbjct: 291 RDLIAH--PNDGEWA 303
>gi|401626408|gb|EJS44355.1| cdc2p [Saccharomyces arboricola H-6]
Length = 1097
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + + Q +N + Y ++
Sbjct: 136 VVRFFGVTSEGYSVLCNVTGFKNYLYVPAPNSSDADDQEQ---------INKFIHYLNET 186
Query: 148 VQH-VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H V I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAVDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ E + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLTKGKYSMIEENN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
Length = 1105
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 68 EPITETIVHSEL---RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI-- 122
+P TE I ++ ++ +R+FG G+ + V G YLYI P+
Sbjct: 99 DPSTENICFQQIDAEEGTIMGGKTAVRLFGVTEAGQSVLLHVTGFQHYLYIA---APVNF 155
Query: 123 TETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTF-LKILLYEPY 181
T+ + A ++ + ++ ++Q V I + +YG+ +++++ LKI + +P
Sbjct: 156 TKDDCEPYRAFLESRVG---QFQPTIQSV---QITMRENIYGFQGNQKSYYLKITVTDPK 209
Query: 182 HMSKLEDLLLNGAVFNERFQPYESH----------IPYILQFCIDYNLYGMSNIEFNMVK 231
+SK+ L G + ++ ++ I Y+L+F ID ++ GMS +E K
Sbjct: 210 FISKVRSALEQGGAQSLNYKGLWNNSDGGILTFDSIQYLLRFMIDTDISGMSWVEAKAGK 269
Query: 232 FRSDSETSLPKLSHCQLEADV 252
+R + K+S+CQ+EA V
Sbjct: 270 YRLFQQHE--KVSNCQIEASV 288
>gi|145251457|ref|XP_001397242.1| DNA polymerase delta catalytic subunit [Aspergillus niger CBS
513.88]
gi|134082776|emb|CAK48550.1| unnamed protein product [Aspergillus niger]
gi|350636552|gb|EHA24912.1| hypothetical protein ASPNIDRAFT_210383 [Aspergillus niger ATCC
1015]
Length = 1105
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 68 EPITETIVHSEL---RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI-- 122
+P TE I ++ ++ +R+FG G+ + V G YLYI P+
Sbjct: 99 DPSTENICFQQIDAEEGTIMGGKTAVRLFGVTEAGQSVLLHVTGFQHYLYIA---APVNF 155
Query: 123 TETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTF-LKILLYEPY 181
T+ + A ++ + ++ ++Q V I + +YG+ +++++ LKI + +P
Sbjct: 156 TKDDCEPYRAFLESRVG---QFQPTIQSV---QITMRENIYGFQGNQKSYYLKITVTDPK 209
Query: 182 HMSKLEDLLLNGAVFNERFQPYESH----------IPYILQFCIDYNLYGMSNIEFNMVK 231
+SK+ L G + ++ ++ I Y+L+F ID ++ GMS +E K
Sbjct: 210 FISKVRSALEQGGAQSLNYKGLWNNSDGGILTFDSIQYLLRFMIDTDISGMSWVEAKAGK 269
Query: 232 FRSDSETSLPKLSHCQLEADV 252
+R + K+S+CQ+EA V
Sbjct: 270 YRLFQQHE--KVSNCQIEASV 288
>gi|8810234|gb|AAF80108.1|AF268040_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHGVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + + ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKITFTDYFAAREVGRMLE-----AQK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+ + + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCSVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|8810236|gb|AAF80109.1|AF268041_1 DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHDVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + + ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKITFTDYFAAREVGRMLE-----AQK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+ + + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCSVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|409081586|gb|EKM81945.1| hypothetical protein AGABI1DRAFT_55049 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1089
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGYK 145
IR++G EG + PY YI F E +T + LN +G
Sbjct: 107 IRMYGVTQEGHSVMALITDFLPYFYIAVPRGFQDEDMT---------AFKGYLNQTVG-S 156
Query: 146 DSVQHVFHISICKKFPMYGYHADER-TFLKILLYEP---YHMSKL----------EDLLL 191
+ VQ V ++ K ++GY D++ +FLK+ + +P Y S L +
Sbjct: 157 NVVQKVEKLA---KRTLWGYRGDDKVSFLKLTISDPKTSYGPSNLYAGSLRLFERAECQF 213
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
G +E +ES+I + L+F ID + GM+ IE K++ TS K SHCQ+E
Sbjct: 214 QGLFPSEPVPTFESNIVFTLRFMIDTKVVGMNWIEVPPGKYK--LVTSQHKRSHCQIELR 271
Query: 252 VKAESIV 258
++ ++ +
Sbjct: 272 MRYDAFI 278
>gi|8810232|gb|AAF80107.1|AF268039_1 DNA polymerase [porcine cytomegalovirus]
Length = 1007
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHDVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + + ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKITFADYFAAREVGRMLE-----AQK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+ + + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCSVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|301119837|ref|XP_002907646.1| DNA polymerase zeta catalytic subunit, putative [Phytophthora
infestans T30-4]
gi|262106158|gb|EEY64210.1| DNA polymerase zeta catalytic subunit, putative [Phytophthora
infestans T30-4]
Length = 1223
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 60/158 (37%), Gaps = 54/158 (34%)
Query: 82 LVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE------TMLQQLAASID 135
L ++VPVIR+FG G+K V VHG+FPY Y +P E T+L +LA I+
Sbjct: 39 LRAREVPVIRIFGATPAGQKALVHVHGIFPYFYFRTEDDPDFEDAERLRTLLPRLAKDIE 98
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
A + SK + N
Sbjct: 99 AA--------------------------------------------NASKQKQRQQNNGN 114
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
RF P S I I + DYN+ GM+ + + VKFR
Sbjct: 115 ATARFNP--SRI--IAKVFADYNIEGMNYVALSNVKFR 148
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 7 VTIDFFMSKPIA--HFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
V +D++MS P+ + + L ++VPVIR+FG G+K V VHG+FPY Y
Sbjct: 14 VVVDYYMSSPLPADSVKKIPASPCYLRAREVPVIRIFGATPAGQKALVHVHGIFPYFYFR 73
Query: 65 FHHEP 69
+P
Sbjct: 74 TEDDP 78
>gi|256071589|ref|XP_002572122.1| DNA polymerase zeta catalytic subunit [Schistosoma mansoni]
Length = 1518
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 FSMNIVTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
S+ I ++D++ S P D +S+ ++PVIRV+G G+K C VHGV PY+
Sbjct: 6 LSIKIFSLDYYFSLPNDLLDIGYSKFARCYSHRIPVIRVYGTTHTGQKICANVHGVLPYI 65
Query: 62 YI 63
+I
Sbjct: 66 FI 67
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 74 IVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH-EPITETMLQQLAA 132
I +S+ ++PVIRV+G G+K C VHGV PY++I + + + +Q
Sbjct: 26 IGYSKFARCYSHRIPVIRVYGTTHTGQKICANVHGVLPYIFIELPNVDSDLDDFVQSFVL 85
Query: 133 SIDKALNIALG 143
S++K++ L
Sbjct: 86 SLEKSIRTKLS 96
>gi|344301399|gb|EGW31711.1| DNA polymerase zeta [Spathaspora passalidarum NRRL Y-27907]
Length = 1519
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN--------GAVFNERF 200
+++ ++SICK PMYG+ F KI L P + +L L G N +
Sbjct: 156 RYIANVSICKAVPMYGFQIGYNLFYKISLLSPNYKPRLTKLFQENKLSLHNIGREDNNKT 215
Query: 201 QPY------ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET 238
+ Y E+HIP++LQF D+NL+G + + R S T
Sbjct: 216 RNYDAHYVFEAHIPHLLQFLTDFNLFGCGWLYIDKDHIRDGSNT 259
>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
Length = 913
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
PV+R+FG +G C FV G PY Y + +T+ Q + D
Sbjct: 17 PVVRLFGRGEDGSSVCCFVPGFEPYFYANVADDSYLQTLPQFIKNKFD------------ 64
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
V + +KF GY ++ LKI + P ++ ++ D + + YE+ I
Sbjct: 65 --TVKDVEPVQKFEPIGYQESKKPMLKITTFYPKNVPEIRDDVQGLEGIED---VYETDI 119
Query: 208 PYILQFCIDYNLYGMS 223
+ +F ID L+GM+
Sbjct: 120 LFKNRFMIDKGLHGMA 135
>gi|119482197|ref|XP_001261127.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
gi|119409281|gb|EAW19230.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
Length = 1105
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+R+FG G+ + V G YLYI P+ T ++ L LG V
Sbjct: 124 AVRLFGVTEAGQSVLLHVTGFQHYLYIA---APVNFT--KEDCDPYRAFLESKLGQFQPV 178
Query: 149 QHVFHISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLLLNGAV---FNERFQPYE 204
+ + I + +YG+ +++++ LKI + EP +SK+ L N A + + +
Sbjct: 179 --IQSVQITMRENIYGFQGNQKSYYLKITVTEPKFISKVRSALENNAQGLNYKGLWSNAD 236
Query: 205 S------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ +I Y+L+F ID ++ GMS +E K+R S KLS+CQ+EA
Sbjct: 237 AGILTFDNIQYLLRFMIDTDIAGMSWVEAKAGKYRLLSPRE--KLSNCQIEA 286
>gi|169806198|ref|XP_001827844.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi
H348]
gi|161779292|gb|EDQ31315.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi
H348]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 31/174 (17%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH--------EPITETMLQQLAASIDKAL 138
+P I +FG + G V V+ PY YI H + I T ++ +DK L
Sbjct: 24 LPTIVIFGKTINGIPIQVKVNDFLPYFYIETSHPVNPNELEDAIKSTTIKNNCHGVDKVL 83
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE 198
K +YGY D + K+ P + + + G V +
Sbjct: 84 --------------------KKNIYGYVEDTSIYYKVFFNTPTIFRQAKAIFDKGLVISG 123
Query: 199 ---RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+F+ +ES+ P++L+F D NL G S I+ + + + + K SH +E
Sbjct: 124 QVVKFKTFESNFPFVLRFMHDINLAGCSYIKIKVWEPENTGNGLIIKTSHKLIE 177
>gi|240278554|gb|EER42060.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
H143]
Length = 1053
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
K P +++FG G + V YLY+ AA + A G+K
Sbjct: 128 KQPAVKLFGVTEAGHSVLLHVTHFLHYLYV---------------AAPVSFAPTDCEGFK 172
Query: 146 DSVQH--------VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF 196
++H + + + + ++G+ ++++ +LKI + +P H++KL L+ G
Sbjct: 173 AYLEHEIEIHHPAIHSVQMVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGKAN 232
Query: 197 NERFQPYES-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHC 246
++ +I YIL+F ID + GMS +E K++ LP ++S+C
Sbjct: 233 YRGMWRADADGILTFDNIEYILRFMIDTGISGMSWVEAPASKYQ-----ILPMVERMSNC 287
Query: 247 QLEADVKAESIVVDMAANDSDVA 269
Q+EA + ++ ND + A
Sbjct: 288 QIEATIHYRDLIAH--PNDGEWA 308
>gi|325090528|gb|EGC43838.1| DNA polymerase subunit delta large [Ajellomyces capsulatus H88]
Length = 1111
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
K P +++FG G + V YLY+ AA + A G+K
Sbjct: 128 KQPAVKLFGVTEAGHSVLLHVTHFLHYLYV---------------AAPVSFAPTDCEGFK 172
Query: 146 DSVQH--------VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF 196
++H + + + + ++G+ ++++ +LKI + +P H++KL L+ G
Sbjct: 173 AYLEHEIEIHHPAIHSVQMVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGKAN 232
Query: 197 NERFQPYES-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHC 246
++ +I YIL+F ID + GMS +E K++ LP ++S+C
Sbjct: 233 YRGMWRADADGILTFDNIEYILRFMIDTGISGMSWVEAPASKYQ-----ILPMVERMSNC 287
Query: 247 QLEADVKAESIVVDMAANDSDVA 269
Q+EA + ++ ND + A
Sbjct: 288 QIEATIHYRDLIAH--PNDGEWA 308
>gi|225555953|gb|EEH04243.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
G186AR]
Length = 1111
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
K P +++FG G + V YLY+ AA + A G+K
Sbjct: 128 KQPAVKLFGVTEAGHSVLLHVTHFLHYLYV---------------AAPVSFAPTDCEGFK 172
Query: 146 DSVQH--------VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF 196
++H + + + + ++G+ ++++ +LKI + +P H++KL L+ G
Sbjct: 173 AYLEHEIEIHHPAIHSVQMVMRENLFGFQGNQKSPYLKITVTDPRHINKLRTLIETGKAN 232
Query: 197 NERFQPYES-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHC 246
++ +I YIL+F ID + GMS +E K++ LP ++S+C
Sbjct: 233 YRGMWRADADGILTFDNIEYILRFMIDTGISGMSWVEAPASKYQ-----ILPMVERMSNC 287
Query: 247 QLEADVKAESIVVDMAANDSDVA 269
Q+EA + ++ ND + A
Sbjct: 288 QIEATIHYRDLIAH--PNDGEWA 308
>gi|320162791|gb|EFW39690.1| DNA polymerase delta1 catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 1295
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQL--AASIDKALNIALG 143
+VP++R++G G VHG PY Y P +TE +L + + +
Sbjct: 248 RVPILRMYGVTEAGNSVMCHVHGFLPYFYAPAAG--LTEDLLPGFMRVLNQNLQQQQRVA 305
Query: 144 YKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-AVFN---E 198
+ + V + + K + +H + + F++I L P +++ +L G V N
Sbjct: 306 RDNLSEVVLSVELVMKESIMYFHNNRKLPFVRITLALPTYVTAARKILERGLDVPNLGFR 365
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
F+ YE++I Y+L+F ID + G S IE K++
Sbjct: 366 AFETYETNIEYVLRFMIDTKVTGCSWIELPAGKWQ 400
>gi|154276096|ref|XP_001538893.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
NAm1]
gi|150413966|gb|EDN09331.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
NAm1]
Length = 1086
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 75 VHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI 134
+ +E + K P +++FG G + V YLY+ AA +
Sbjct: 161 IEAEEGTIGGGKQPAVKLFGVTEAGHSVLLHVTHFLHYLYV---------------AAPV 205
Query: 135 DKALNIALGYKDSVQH--------VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSK 185
A G+K ++H + + + + ++G+ ++++ +LKI + +P H++K
Sbjct: 206 SFAPTDCEGFKAYLEHEIEIHHPAIHSVQMVMRENLFGFQGNQKSPYLKITVTDPRHINK 265
Query: 186 LEDLLLNGAVFNERFQPYES-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSET 238
L L+ G ++ +I YIL+F ID + GMS +E K++
Sbjct: 266 LRTLIETGRANYRGMWRADADGILTFDNIEYILRFMIDTGMSGMSWVEAPASKYQ----- 320
Query: 239 SLP---KLSHCQLEADVKAESIVVDMAANDSDVA 269
LP ++S+CQ+EA + ++ ND + A
Sbjct: 321 ILPMVERMSNCQIEATIHYRDLIAH--PNDGEWA 352
>gi|403333149|gb|EJY65649.1| DNA polymerase [Oxytricha trifallax]
Length = 1272
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPF-HHEPITETMLQQLAASIDKALNIALGYKDS 147
+IR++G N +G + VH PY +I +++ I ++ L +L ++ L + G
Sbjct: 317 IIRLYGVNNDGNSIVLHVHNFKPYFFIQLSYNQYIDQSHLPELKRFLNSKLPNSQG---- 372
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE---RFQPYE 204
V + + ++ + Y+ + F+K+ P +++ L + G FN +E
Sbjct: 373 ---VVDLELMERQSIQNYNDKVQKFVKVYTILPKYVNTLRSFVEKGLQFNGVSFWTTTFE 429
Query: 205 SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
S++P+ L+F ID + GMS I+ + + + CQ+E DV
Sbjct: 430 SNLPHALRFMIDNQIVGMSWIKMEKGSYALRNAKKFKTV--CQIELDV 475
>gi|398021685|ref|XP_003864005.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
gi|322502239|emb|CBZ37322.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
Length = 1032
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 67 HEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITE 124
HE ++ + HSE VPV+R++G EG V + PYL+I P + P+
Sbjct: 41 HETVSR-VRHSE--------VPVVRLYGVTAEGFSVLVHCYNYEPYLWIEAPPNWLPVHS 91
Query: 125 TMLQQLAASIDKALNIALGYKDSVQHV-FHISICKKFPMYGYHADERTFLKILLYEPYHM 183
Q+ ++ L+ +D+V V H ++ MY LKI++ P H+
Sbjct: 92 ---QEFMRELNNQLSNQTRLQDTVVRVEVHQ---RRSLMYFKGGQLVPHLKIVVQLPQHI 145
Query: 184 SKLEDLLLN------GAVFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
KL LL + GA R FQ +ES++ + L+F +D ++ G + + KF +
Sbjct: 146 PKLRSLLSDRGVSCPGAWDGTRVFQTFESNVIFPLRFLVDNDIGGSNWLTLTYGKFFA-- 203
Query: 237 ETSLPKLSHCQLEADVKAESI 257
S K S CQ+E E +
Sbjct: 204 --SPIKTSTCQIEVACSHEDV 222
>gi|146097987|ref|XP_001468284.1| putative DNA polymerase delta catalytic subunit [Leishmania
infantum JPCM5]
gi|134072651|emb|CAM71367.1| putative DNA polymerase delta catalytic subunit [Leishmania
infantum JPCM5]
Length = 1032
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 67 HEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITE 124
HE ++ + HSE VPV+R++G EG V + PYL+I P + P+
Sbjct: 41 HETVSR-VRHSE--------VPVVRLYGVTAEGFSVLVHCYNYEPYLWIEAPPNWLPVHS 91
Query: 125 TMLQQLAASIDKALNIALGYKDSVQHV-FHISICKKFPMYGYHADERTFLKILLYEPYHM 183
Q+ ++ L+ +D+V V H ++ MY LKI++ P H+
Sbjct: 92 ---QEFMRELNNQLSNQTRLQDTVVRVEVHQ---RRSLMYFKGGQLVPHLKIVVQLPQHI 145
Query: 184 SKLEDLLLN------GAVFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
KL LL + GA R FQ +ES++ + L+F +D ++ G + + KF +
Sbjct: 146 PKLRSLLSDRGVSCPGAWDGTRVFQTFESNVIFPLRFLVDNDIGGSNWLTLTYGKFFA-- 203
Query: 237 ETSLPKLSHCQLEADVKAESI 257
S K S CQ+E E +
Sbjct: 204 --SPIKTSTCQIEVACSHEDV 222
>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
Length = 1147
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 20/183 (10%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKALNI-ALGYKD 146
+R+FG G CV VHG PY Y +P + + M + S++ A+ G
Sbjct: 157 LRIFGVTAGGNSVCVHVHGFEPYFYAKVP---DAFKDEMCEPFRVSLNGAMAANQRGGNQ 213
Query: 147 SVQHVFHISI----CKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV------- 195
F S+ K+ MY TF+K+ P ++ ++ V
Sbjct: 214 RGNGTFIGSVEIVRDKQSLMYFQEGKTSTFVKVTTTLPNMVATARGIIEKQGVTVPGLHH 273
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
+ FQ +ES++ Y L+F +D + G + +E + + K S CQ E DVK +
Sbjct: 274 TSLTFQTFESNVLYTLRFMVDRGVVGGNWVELPAGGY---TIRESQKQSMCQYECDVKFD 330
Query: 256 SIV 258
+V
Sbjct: 331 KVV 333
>gi|119192044|ref|XP_001246628.1| hypothetical protein CIMG_00399 [Coccidioides immitis RS]
Length = 1525
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 25/84 (29%)
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRS---------DSE------------- 237
QPYESH+ YI Q+ DYNLYG + I+ V FR DSE
Sbjct: 5 LQPYESHMQYIPQWMCDYNLYGCAYIDCRKVTFRGPVPLQCELEDSEHQWHDQSIAPALI 64
Query: 238 ---TSLPKLSHCQLEADVKAESIV 258
+ P+ SHC LE DV + I+
Sbjct: 65 SDAGAFPRQSHCALEVDVHVQDIL 88
>gi|149241046|ref|XP_001526263.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450386|gb|EDK44642.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1803
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 25/98 (25%)
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV----FNERFQP-- 202
++V +SICK P+YG+ + F KI L P + ++L L + F++ QP
Sbjct: 222 KYVAKVSICKAVPIYGFQLGYKLFYKISLLSPLYKTRLAKLFQENKISLVDFDKPPQPSS 281
Query: 203 -------------------YESHIPYILQFCIDYNLYG 221
YE HIP++LQF D+NL+G
Sbjct: 282 HASGAAQGDKKTKKRYSYTYEVHIPFLLQFLTDFNLFG 319
>gi|337732497|gb|AEI71770.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHDVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + + ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKITFTDYFAAREVGRMLE-----AQK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+ + + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCFVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|319919380|gb|ADV78258.1| DNA polymerase [Porcine cytomegalovirus]
Length = 1007
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 80 RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN 139
R+ VI VIR+FG V G K CV V G Y+Y E ++++
Sbjct: 106 RHHVIPTGTVIRLFGKTVNGVKICVNVFGQLSYIYCEVPSETYLHDVMKKYM-------- 157
Query: 140 IALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER 199
Y+++ F ++ KF MYG++ T KI + + ++ +L ++
Sbjct: 158 ----YENNKNFTFSTAVDNKFSMYGFNRSPVTVYKITFTDYFAAREVGRMLE-----AQK 208
Query: 200 FQPYESHIPYILQFCID-----YNLYGMSNIEFNMVKFRSDS-ETSLPKLSHCQLEADVK 253
+ YE+ + + +F ID + Y + N KF + S E S C L+ D+
Sbjct: 209 IKVYETSVDVLSRFYIDNDYPSFGWYTVQKYSINEYKFSNQSLEISCFVKDLCPLDEDIW 268
Query: 254 AE 255
E
Sbjct: 269 PE 270
>gi|340052318|emb|CCC46594.1| putative DNA polymerase delta catalytic subunit [Trypanosoma vivax
Y486]
Length = 1026
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 71 TETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPI-TETML 127
T+ H + + + P+IR++G EG V + PYL+I P + P+ ++T++
Sbjct: 31 TQGDSHETISTVQHEDNPIIRLYGVTKEGFSVLVHCYNFEPYLWIKAPPNWLPVYSQTLI 90
Query: 128 QQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKL 186
+L + +D ++ V I I KK + Y + + LKI++ P H+ KL
Sbjct: 91 NELNSLLDPQTHL-------TGTVVRIEIHKKQSIMYYTGNGMSDHLKIVVQLPQHIPKL 143
Query: 187 EDLLLNGAVF-----NER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL 240
LL G N R F +ES++ + L+F +D + G + + + KF S
Sbjct: 144 RSLLSAGVACPGMWDNTRSFATFESNVIFPLRFLVDNKIGGCNWLTISKDKFVK----ST 199
Query: 241 PKLSHCQLE 249
+ S CQ+E
Sbjct: 200 VRTSTCQIE 208
>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
Length = 1059
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+ P IR++G EG V G PY Y P P+ + AS+ ++L+ A+G+
Sbjct: 96 RKPTIRLYGVTQEGNSVLCHVKGFHPYFYFP---APV--GFQRSHLASLKQSLSTAVGFG 150
Query: 146 DSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG 193
+ + +V I K +YGY D +T ++++ +Y+P +SK + + +G
Sbjct: 151 NIIDNV---DIVMKQSIYGYQGDIKTPYIRVTVYDPKDISKCKGKIESG 196
>gi|406607376|emb|CCH41280.1| DNA polymerase delta catalytic subunit [Wickerhamomyces ciferrii]
Length = 1108
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 63 IPFHHEPITETIVHSEL--RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP---- 116
+P +P T I +L + + +R FG EG V G Y Y+P
Sbjct: 108 LPVDWKPETHDITFQQLDAEEALTEGSSAVRFFGVTQEGYSVLCNVTGFLHYFYVPAPLN 167
Query: 117 FHHEPIT--ETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FL 173
F E + + LQQ S + V I +C K ++G++ +++ FL
Sbjct: 168 FRKEHLLSFKNYLQQ-----------------SFEGVLDIELCFKESIWGFNGNQKVCFL 210
Query: 174 KILLYEPYHMSKLEDLLLNGAV-FNERFQPYE------SHIPYILQFCIDYNLYGMSNIE 226
KI+ + K+ G V +N F +I Y+L+ ID + GMS I
Sbjct: 211 KIIGVNAKDIPKIRSGFEKGMVSWNGMFNSNGDGTMTYDNIQYLLRLMIDCKITGMSWIT 270
Query: 227 FNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ + ET L K S CQLE ++ +S++
Sbjct: 271 LPKGTY-TPVETGL-KTSRCQLEVNIDYKSLI 300
>gi|365983526|ref|XP_003668596.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
gi|343767363|emb|CCD23353.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
Length = 1107
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 92/229 (40%), Gaps = 18/229 (7%)
Query: 48 KKTCVFVHGVFPYLYIPFHHEPITETI--VHSELRN--LVIQKVPVIRVFGNNVEGKKTC 103
K T ++ P + P H+ + I S L N V V+R FG EG
Sbjct: 97 KDTSIYKRTPIPKDFSPSTHDISFQQIDAEQSTLNNGTKVNNTSTVVRFFGVTSEGCSVL 156
Query: 104 VFVHGVFPYLYIPFHH--EPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFP 161
V G YLY+P + E I L+ LN G + V I + +K
Sbjct: 157 CNVTGFKHYLYVPAPNGIESIDPNELKNFI----NYLNELFGTTNQ-NGVDSIEVVQKQS 211
Query: 162 MYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES---HIPYILQFCID 216
++GY D F KI + P ++KL G +N F + +I Y L+ +D
Sbjct: 212 IWGYSGDGNLPFWKIYVTYPSLINKLRTGFEKGHYTYNSWFTNGTTTYDNIAYPLRLMVD 271
Query: 217 YNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND 265
+ GMS I K+ + S KLS CQLE + + +V A ND
Sbjct: 272 CGIVGMSWITLPKGKYTMIPDAS--KLSTCQLEVCINYKDLVAHPAEND 318
>gi|157131544|ref|XP_001655872.1| hypothetical protein AaeL_AAEL012137 [Aedes aegypti]
gi|108871489|gb|EAT35714.1| AAEL012137-PA [Aedes aegypti]
Length = 686
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 282 LLNSMRAILLGQEPHLLMDPDVYS----MQDLLDVKSGALYLKLKDLVSACSI-FRMRAI 336
LLN + AI L + HL +P +Y +Q +++ Y+K D + C M+
Sbjct: 526 LLNDINAIPLYRINHL--NPKLYEKVRVLQVARNIRKNLKYIK--DFIMNCRFAIEMKGQ 581
Query: 337 LLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNCE 383
+ H+ D D +SM D + V+SG+ + DL+ C H+Y CE
Sbjct: 582 MQNVAEHITSDLDSWSMADFISVRSGSFQKEKTDLIKRCEKHIYECE 628
>gi|449017897|dbj|BAM81299.1| DNA polymerase delta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1084
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD-S 147
+RV+G + G+ + V G PY Y + + L +L A ++ D S
Sbjct: 101 TVRVYGVTLSGESVLLCVQGFAPYFYAS-APKGFGDGALGELRAELEHKCRTMGRVADCS 159
Query: 148 VQHVFHISICKKFPMYGYH--ADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
+ + ++ + Y D+ FL+I + P + LL G+V F +ES
Sbjct: 160 GDCILGVERVRRRSVLYYKPGEDDSEFLRITVRTPDLVRVAAGLLSQGSVLGRVFDVFES 219
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+ ++L+F ID + G S IE + S P S+ Q+ A+ +S+V
Sbjct: 220 SVDFVLRFMIDTKMMGCSWIEVPAGSYTVVSNALSP--SYAQIVAEAHWQSVV 270
>gi|401427880|ref|XP_003878423.1| putative DNA polymerase delta catalytic subunit [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494671|emb|CBZ29973.1| putative DNA polymerase delta catalytic subunit [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1032
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VPV+R++G EG V + PYL+I + + Q L ++ L+ +
Sbjct: 51 EVPVVRLYGVTAEGFSVLVHCYNYEPYLWIEAPPNWV-DVHSQGLMRELNNQLSNQTRLQ 109
Query: 146 DSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVF-------NE 198
D+V V ++ MY LKI++ P H+ KL LL + V
Sbjct: 110 DTVVRVEAHQ--RRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLCDRGVSCPGVWDGTR 167
Query: 199 RFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
FQ +ES++ + L+F +D ++ G + + KF + S K S CQ+E E +
Sbjct: 168 IFQTFESNVIFPLRFLVDNDIGGSNWLTLTYGKFFACS----AKTSTCQIEVACSHEDV 222
>gi|170574522|ref|XP_001892851.1| DNA polymerase delta catalytic subunit [Brugia malayi]
gi|158601393|gb|EDP38315.1| DNA polymerase delta catalytic subunit, putative [Brugia malayi]
Length = 1084
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI----PFHHEPITETMLQQLAASIDKALNIALGY 144
VIR+FG CV VHG PY Y+ F E I E + L + + +G
Sbjct: 93 VIRLFGATANQNSICVQVHGFLPYFYVLLESRFDEEHI-EYAKKYLNDIVKAQVPANIGI 151
Query: 145 KDSVQH-VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVF-----N 197
+V++ V + I +Y Y D + FLK+ + P ++ + NG
Sbjct: 152 PKNVENLVVDLDIVHGANVYEYKKDLNQKFLKVYVCSPKLLNLCRRVFTNGVNLIKGGQM 211
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
E +E++I + ++F D+NL G + + K+ + +S CQ E + +
Sbjct: 212 ESLSCFETNIDFEIRFMTDHNLVGCAWVTLPSEKYLIVEGKDM--ISRCQFECSINNTDL 269
Query: 258 VV 259
V+
Sbjct: 270 VI 271
>gi|145514650|ref|XP_001443230.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410608|emb|CAK75833.1| unnamed protein product [Paramecium tetraurelia]
Length = 980
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 136 KALNIALGYKDSV---QHVFHISICKKFPMYGYHADER--TFLKILLYEPYHMSKLEDLL 190
K LN+ L + + + + I +C+K + Y D + +LKI + +P ++++ + L
Sbjct: 19 KELNVLLAKQKNFGGKEPIVKIEVCQKESIRYYKGDNKKQNYLKIYVVQPTFVAQIRNFL 78
Query: 191 L--NGAVFNERFQ--PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHC 246
N V + +ES+IPY L+F I+Y++ GM IE R + K+S C
Sbjct: 79 KSDNRMVCDMELPQLTFESNIPYALRFMIEYDIVGMGWIELKDYIIRENKN----KISSC 134
Query: 247 QLEADVKAE 255
Q+E ++ +
Sbjct: 135 QIEVNIDCQ 143
>gi|71033557|ref|XP_766420.1| DNA polymerase delta catalytic subunit [Theileria parva strain
Muguga]
gi|68353377|gb|EAN34137.1| DNA polymerase delta catalytic subunit, putative [Theileria parva]
Length = 1095
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALG 143
+ +VP++R++G E + V V PY YI + + E L +K L+
Sbjct: 95 LTEVPMVRLYGVTKEQQSVLVCVDDFNPYFYIEKPPDLLDE-YFDDLKRVFNKYLSEQNQ 153
Query: 144 YKDSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFNER--- 199
+K S+++V I + + Y + E+ FL+I++ P +S L + +G +
Sbjct: 154 FKKSLRYVLDIQKVRLTSLMMYDENGEKDFLRIVVSSPRMVSNLRSFIESGVDLSVEGDS 213
Query: 200 ------FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-SDSETSLPKLSHCQLEADV 252
Q YE+++PY+L+F +D N+ S + + +D + LS+C +E +
Sbjct: 214 VSIPLFRQTYEANLPYVLRFLLDNNVICGSWLMIPHNTYTLNDPKNFSALLSNCNIEVNC 273
Query: 253 KAESIV 258
I+
Sbjct: 274 GHSDII 279
>gi|219121567|ref|XP_002181135.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407121|gb|EEC47058.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1087
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VP++R FG + G VFVHG PY Y + T L +L+A I + L L
Sbjct: 73 QVPILRGFGVDERGHSIAVFVHGFTPYAYFALEN-GYELTNLAELSA-IRQTLTARLAAA 130
Query: 146 DSVQHVFHIS------ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNG------ 193
H I + GY FLKI + P + L+ ++ +G
Sbjct: 131 ARGGTATHAEVLGIEYITDHKSIMGYETPHTKFLKIYVSLPGLVPTLKRIMEDGIDLPGI 190
Query: 194 -------AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLSH 245
+ +E+++P++L+F +D L G + ++ +P K +H
Sbjct: 191 TRTGGTSTGLPPTYAAFEANVPFVLRFMVDRKLSGAGWLTLPSDTYQI---REIPRKETH 247
Query: 246 CQLEADVKAESIV 258
CQ+E D+ + I
Sbjct: 248 CQIEVDISYDDIT 260
>gi|258573513|ref|XP_002540938.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
gi|237901204|gb|EEP75605.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
Length = 1482
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 27/85 (31%)
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR-------------------------- 233
QPYESH+ Y+ Q+ DYNLYG S IE FR
Sbjct: 5 LQPYESHMQYVPQWMCDYNLYGCSYIECRKATFRGPVPLYSELEDPNHRWHDRSIPPELI 64
Query: 234 SDSETSLPKLSHCQLEADVKAESIV 258
SD+ PK SHC LE D++ + I+
Sbjct: 65 SDA-VVYPKQSHCMLEVDIQVQDIL 88
>gi|115387887|ref|XP_001211449.1| DNA polymerase delta catalytic subunit [Aspergillus terreus
NIH2624]
gi|114195533|gb|EAU37233.1| DNA polymerase delta catalytic subunit [Aspergillus terreus
NIH2624]
Length = 1104
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
IR+FG G+ + V G YLYI T+ A ++ L Y+ ++
Sbjct: 123 AIRLFGVTEIGQSVLLHVTGFQHYLYIAAPG-GFTKEDCDPYRAFLESRLG---SYQRTI 178
Query: 149 QHVFHISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLLLNGAVFNERFQPYES-- 205
Q V I + +YG+ +++++ LKI + +P ++++ L NG N ++ S
Sbjct: 179 QSV---EITLRENIYGFQGNQKSWYLKITVTDPRSVARVRSALENGGS-NMNYKGLWSKE 234
Query: 206 --------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
+I Y+L+F ID + GMS +E K+R + + S+CQ+EA V +
Sbjct: 235 DAGILTFDNIQYLLRFMIDTGISGMSWVEAKAGKYRLLNHDE--RQSNCQIEAAVDYRDL 292
Query: 258 VV 259
+
Sbjct: 293 IA 294
>gi|332687549|emb|CBZ41215.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687551|emb|CBZ41216.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687553|emb|CBZ41217.1| catalytic subunit of DNA polymerase delta [Saccharomyces bayanus]
Length = 1097
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V+R FG EG V G YLY+P + + Q I+K ++ D
Sbjct: 136 VVRFFGVTSEGYSVLCNVTGFKNYLYVPAPNSSDADDQEQ-----INKFMHYLNETFDGA 190
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
V I + K ++GY D + F KI + P+ ++KL G + FN F +
Sbjct: 191 --VDSIEVVPKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGTTT 248
Query: 206 --HIPYILQFCIDYNLYGMSNI-----EFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+I Y L+ +D + GMS I +++M+K S ++S CQLE + +++
Sbjct: 249 YDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIKPES-------RVSSCQLEVSINYRNLI 301
Query: 259 VDMAAND 265
A D
Sbjct: 302 SHPAEGD 308
>gi|124802958|ref|XP_001347646.1| DNA polymerase zeta catalytic subunit, putative [Plasmodium
falciparum 3D7]
gi|23495229|gb|AAN35559.1|AE014834_56 DNA polymerase zeta catalytic subunit, putative [Plasmodium
falciparum 3D7]
Length = 2240
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGV--------------FPYLYIPFHHEPITETMLQ-QLA 131
V +I++ G ++ G++ C+++H + F Y F H PI++ L+ +L
Sbjct: 44 VCIIQILGLSLLGQRVCLYIHDLMYVYLIVYFILFYCFISFYFIFFHSPISDDKLEIELC 103
Query: 132 ASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLL 191
+ +++ A + V++I K+ +YGY+ + FLKI P ++ LL
Sbjct: 104 SFLEEEYGKARKDPSNNVCVYNIERVKRKGIYGYNEECDDFLKISFLYPNTINYFASLLK 163
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYNLYGMSNI 225
+ YE HI Y+L F N+YG S I
Sbjct: 164 KKLFKKRIWDLYEVHINYMLHFLCMKNIYGCSEI 197
>gi|350416786|ref|XP_003491102.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Bombus impatiens]
Length = 943
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 299 MDPDVYSMQDLLDVKSGALYLKL---KDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQ 354
++P +Y L ++ L L+L KD + C +L +EP +++ +P VYS+Q
Sbjct: 791 LNPSLYRRIKQL-ARTRLLRLQLFFFKDFLFTCRFATSVQDILKKEPNYIISEPHVYSIQ 849
Query: 355 DLLDVKSGALYLKLKDLVSACSSHVYNCE 383
DL+ VK G L ++L++LV C+ H+ CE
Sbjct: 850 DLMHVKYGILPMRLQELVEMCNMHIMGCE 878
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSI 330
S++ IL + +++ +P VYS+QDL+ VK G L ++L++LV C++
Sbjct: 827 SVQDILKKEPNYIISEPHVYSIQDLMHVKYGILPMRLQELVEMCNM 872
>gi|348690058|gb|EGZ29872.1| hypothetical protein PHYSODRAFT_468044 [Phytophthora sojae]
Length = 1248
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 7 VTIDFFMSKPI--AHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
V +D++M+ P+ + + + L ++VPV+R+FG G+K V VHG+FPY Y
Sbjct: 14 VVVDYYMNSPLPAGAIEKLPASPCYLRAREVPVVRIFGATPAGQKALVHVHGIFPYFYFR 73
Query: 65 FHHEP 69
+P
Sbjct: 74 AEDDP 78
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 54/158 (34%)
Query: 82 LVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE------TMLQQLAASID 135
L ++VPV+R+FG G+K V VHG+FPY Y +P E +L +LA I+
Sbjct: 39 LRAREVPVVRIFGATPAGQKALVHVHGIFPYFYFRAEDDPDFEDPERLRALLPRLAKDIE 98
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
A + SK + N
Sbjct: 99 AA--------------------------------------------NASKQQQNRQNNGN 114
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR 233
R+ P S I I + DYN+ GM+++ F+ VKFR
Sbjct: 115 STARYNP--SRI--IAKVFADYNIEGMNSVAFSNVKFR 148
>gi|157875046|ref|XP_001685930.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
gi|68129003|emb|CAJ06437.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
Length = 1032
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 67 HEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITE 124
HE ++ + HSE VPV+R++G EG V + PYL+I P + P+
Sbjct: 41 HETVSR-VRHSE--------VPVVRLYGVTAEGFSVLVHCYNYEPYLWIEAPPNWLPVYS 91
Query: 125 TMLQQLAASIDKALNIALGYKDSVQHV-FHISICKKFPMYGYHADERTFLKILLYEPYHM 183
Q ++ L+ +D+V V H ++ MY LKI++ P H+
Sbjct: 92 ---QAFMRELNDQLSNQTRLQDTVVRVEVHQ---RRSLMYFKGGQLVPHLKIVVQLPQHI 145
Query: 184 SKLEDLLLN------GAVFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
KL LL + GA R FQ +ES++ + L+F +D ++ G + + KF +
Sbjct: 146 PKLRSLLSDRGVSCPGAWDGIRVFQTFESNVIFPLRFLVDNDIGGSNWLTLTYGKFFA-- 203
Query: 237 ETSLPKLSHCQLE 249
S K S CQ+E
Sbjct: 204 --SPVKTSTCQIE 214
>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
Length = 1070
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
V+R++G G VHG P+ +I P +P +++ +A++ +
Sbjct: 89 VLRIYGVTEGGNSVLARVHGFRPFFFIICPSQFDPADLPAIKESLEKRARAVSSMKNCQG 148
Query: 147 SVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV----FNE-RF 200
+ H I + +Y +D FLKI + P ++ +L +L G + + E R+
Sbjct: 149 PIIHDLEIFEGRSL-LYFVPSDPLIRFLKITVALPSYVRQLAQILERGDIDFSPYEESRY 207
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP--KLSHCQLEADV 252
+E+ + +IL+F I+ N+YG S +E ++ LP + SH Q E D+
Sbjct: 208 STFEASVDFILRFMIETNMYGCSWVEMPSNRYH------LPEKQTSHMQFEIDI 255
>gi|259090299|pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 70 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 120
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 121 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 180
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 181 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 238
Query: 262 AAND 265
A D
Sbjct: 239 AEGD 242
>gi|71002632|ref|XP_755997.1| DNA polymerase delta catalytic subunit Cdc2 [Aspergillus fumigatus
Af293]
gi|66853635|gb|EAL93959.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
fumigatus Af293]
gi|159130051|gb|EDP55165.1| DNA polymerase delta large chain [Aspergillus fumigatus A1163]
Length = 1105
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+R+FG G+ + V G YLYI P+ T ++ L LG V
Sbjct: 124 AVRLFGVTEAGQSVLLHVTGFQHYLYIA---APVNFT--KEDCDPYRAFLESKLGQFQPV 178
Query: 149 QHVFHISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLLLNGA-------VFNERF 200
+ + I + +YG+ +++++ LKI + EP +SK+ L N A ++N
Sbjct: 179 --IQSVQITMRENIYGFQGNQKSYYLKITVTEPKFISKVRSALENNAQGLNYKGLWNNAD 236
Query: 201 QPYES--HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ +I Y+L+F ID ++ GMS +E K+ S KLS+CQ+EA
Sbjct: 237 GGILTFDNIQYLLRFMIDTDIAGMSWVEAKAGKYHLLSPRE--KLSNCQIEA 286
>gi|1199547|emb|CAA64911.1| CDC2 [Saccharomyces cerevisiae]
gi|1431142|emb|CAA98669.1| CDC2 [Saccharomyces cerevisiae]
Length = 1097
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|392300015|gb|EIW11106.1| Pol3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1097
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|50543418|ref|XP_499875.1| YALI0A08426p [Yarrowia lipolytica]
gi|49645740|emb|CAG83802.1| YALI0A08426p [Yarrowia lipolytica CLIB122]
Length = 1072
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 36/199 (18%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGY 144
V+R+FG EG + G Y Y P F E ++ T+ +A ++ AL
Sbjct: 94 VVRLFGVTKEGHTILCNIRGFCHYFYAPVPVGFKAENLS-TLKSAIANTVPDALE----- 147
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG---------- 193
+ +C++ +GY+ + F KI P + KL NG
Sbjct: 148 --------RLEVCERESFWGYNGGAKAKFFKIFATNPKLIPKLRSAFENGNLNFPSSHAQ 199
Query: 194 --AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
+F ++ +IPY+L+ ID ++ GMS + K+ ++++ +S CQ E +
Sbjct: 200 VGMLFANGCTSFD-NIPYVLRCMIDCHISGMSWVTLPKGKYTIETQSL---VSRCQREIN 255
Query: 252 VKAESIVVDMAAND-SDVA 269
+ + ++ A + SD+A
Sbjct: 256 ISYKDLIAHPADGEWSDIA 274
>gi|259145143|emb|CAY78407.1| Pol3p [Saccharomyces cerevisiae EC1118]
Length = 1097
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|330443503|ref|NP_010181.2| Pol3p [Saccharomyces cerevisiae S288c]
gi|341940645|sp|P15436.4|DPOD_YEAST RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|4191|emb|CAA43922.1| DNA polymerase III catalytic subunit [Saccharomyces cerevisiae]
gi|329138870|tpg|DAA11758.2| TPA: Pol3p [Saccharomyces cerevisiae S288c]
Length = 1097
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|323355835|gb|EGA87648.1| Pol3p [Saccharomyces cerevisiae VL3]
Length = 1097
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|207347015|gb|EDZ73334.1| YDL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1097
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|151941901|gb|EDN60257.1| DNA polymerase III catalytic (delta) subunit [Saccharomyces
cerevisiae YJM789]
Length = 1097
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|365766444|gb|EHN07940.1| Pol3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1097
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|380803397|gb|AFE73574.1| DNA polymerase delta catalytic subunit, partial [Macaca mulatta]
Length = 116
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPF--HHEPITETMLQQLAASIDKALNIAL--- 142
PV+R FG EG C +HG PY Y P EP + + + LN+A+
Sbjct: 1 PVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFEP-------EHLGDLQRELNLAISRD 53
Query: 143 ---GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG 193
G + + V + +C + M+GYH + FL+I L P ++ LL G
Sbjct: 54 NRGGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQG 108
>gi|390354909|ref|XP_796202.3| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 1119
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 303 VYSMQDLLDVKSGALYLKLKDLVSACSIFR-MRAILLGQEPHLLMDPDVYSMQDLLDVKS 361
V MQ + D++S +LK D + C + ++A Q H + PD+YS+ DLL+V+S
Sbjct: 963 VKQMQAVKDLRSQLFFLK--DFLKTCRLCESLKASYDNQPGHWMGQPDLYSLSDLLNVRS 1020
Query: 362 GALYLKLKDLVSACSSHVYNCE 383
G L L LV +HV C+
Sbjct: 1021 GELEKALAQLVLDGVTHVSQCQ 1042
>gi|349576978|dbj|GAA22147.1| K7_Cdc2ap, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 433
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY D + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|390354911|ref|XP_003728435.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 1140
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 303 VYSMQDLLDVKSGALYLKLKDLVSACSIFR-MRAILLGQEPHLLMDPDVYSMQDLLDVKS 361
V MQ + D++S +LK D + C + ++A Q H + PD+YS+ DLL+V+S
Sbjct: 984 VKQMQAVKDLRSQLFFLK--DFLKTCRLCESLKASYDNQPGHWMGQPDLYSLSDLLNVRS 1041
Query: 362 GALYLKLKDLVSACSSHVYNCE 383
G L L LV +HV C+
Sbjct: 1042 GELEKALAQLVLDGVTHVSQCQ 1063
>gi|344233498|gb|EGV65370.1| DNA polymerase delta catalytic subunit [Candida tenuis ATCC 10573]
Length = 1060
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
+ R FG +G V G YLY+P S+D +N Y +S
Sbjct: 90 IARFFGITDKGNSILCNVTGFLHYLYVPVPR-----------GFSVDDNMNTFKNYLTNS 138
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES- 205
+ + I + K ++G++ + + F KI + ++S+L + G V E P +
Sbjct: 139 FEGIRAIEVSAKESIWGFNNNIKVPFFKIFVNNARNISRLRGMFERGEVHFEELFPMGTV 198
Query: 206 ---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
+I Y+L+ +D + GMS I K+ + +L + S CQ+E + + +V
Sbjct: 199 TYDNINYLLRLMVDCKITGMSWITLPKGKYHLQKDENLFQ-STCQIECSINYKDLVT 254
>gi|209882407|ref|XP_002142640.1| DNA polymerase family B [Cryptosporidium muris RN66]
gi|209558246|gb|EEA08291.1| DNA polymerase family B, putative [Cryptosporidium muris RN66]
Length = 1123
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHE------PITETMLQQLAASID---KA 137
VP+I++F G V VHG FPY+Y ++ I +++ QQL + +
Sbjct: 127 VPIIQLFCVTKSGYSILVNVHGFFPYIYCEVSNKSSPKPSAIVKSIEQQLGNYSEYQSRV 186
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
L++ + + + + K++ G F KI + P + L+ NG +
Sbjct: 187 LDVEIS---EFESIMYFKKSKEYSNDGISYSPSLFYKITMLLPKMIPTCRSLIENGNIDC 243
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVK 231
YE++IP+IL+F ID N+ S I + K
Sbjct: 244 IPI-AYEANIPFILRFLIDKNISTGSWISLDKSK 276
>gi|219129595|ref|XP_002184970.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403465|gb|EEC43417.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1144
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 90/262 (34%), Gaps = 101/262 (38%)
Query: 71 TETIVHSELRNLVIQKVPVIRVFG---------NNVEG--------KKTCVFVHGVFPYL 113
TE S+ R + +VPV+RVFG +N +G + C+++HG FPYL
Sbjct: 97 TELGAASQTRTPL--QVPVLRVFGPILRRDNDDSNPDGNGSLDPPTQSACLYIHGAFPYL 154
Query: 114 Y---------------------------------------IPFHHEPITETM---LQQLA 131
+P HE + ++ LQQ +
Sbjct: 155 LCRPVVAGADGSWHRSSHNHHGLTPSGHLDWDDAAAVERILPVLHEHLEASLQASLQQSS 214
Query: 132 ASIDKALNI---ALGYKDSVQHVFHISICKKFPM------YGYHADERT-FLKILLYEPY 181
+DK N A G I ++ + Y Y A F+++ Y P
Sbjct: 215 LGLDKHSNSNREATGNSRQPPKPPATKIIRRLSLVVGRGFYTYCAGPPAPFVRVEYYNPK 274
Query: 182 HMSKLEDLLLNG----------------AVFNERFQP--------------YESHIPYIL 211
K++ LL G A + +P YE+HIPY +
Sbjct: 275 SRWKVKMLLERGLELPSLYHPDPIQYEPAAREDHVEPDIDAANAETLSFHCYEAHIPYTM 334
Query: 212 QFCIDYNLYGMSNIEFNMVKFR 233
QF DYNL GM I KFR
Sbjct: 335 QFFKDYNLAGMRYIHIGKTKFR 356
>gi|407862999|gb|EKG07818.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1029
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYK 145
PV+R++G EG V + PYL+I P P +L+ LN L
Sbjct: 48 PVVRLYGVTKEGHSVLVHCYNYEPYLWIKAPKGWLPAYSQLLK-------AELNAQL--- 97
Query: 146 DSVQH----VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLN------GA 194
DS+ H V I + K+ + Y + T LKI++ P H+ +L LL + GA
Sbjct: 98 DSLTHASDTVVRIEVHKRQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGA 157
Query: 195 VFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
R F YES++ + L+F +D + G + + + F + +E + S CQ+E
Sbjct: 158 WDGVRVFPTYESNVIFPLRFIVDNGISGCNWLTIPVGSFCTATE----RTSTCQIELCCS 213
Query: 254 AESI 257
E++
Sbjct: 214 HEAV 217
>gi|121716875|ref|XP_001275938.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
gi|119404095|gb|EAW14512.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
Length = 1105
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+R+FG G+ + V G YLYI P+ T ++ L LG+ V
Sbjct: 124 AVRLFGVTEIGQSVLLHVTGFQHYLYIA---APVNFT--KEDCDPYRAFLESKLGHFQPV 178
Query: 149 QHVFHISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLL---LNGAVFNERFQPYE 204
+ + I + +YG+ +++++ LKI + EP +SK+ L G + + +
Sbjct: 179 --IQSVQITMRENIYGFQGNQKSYYLKITVTEPKFISKVRGALEHNSQGLNYKGLWSSAD 236
Query: 205 S------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ +I Y+L+F ID ++ GMS +E K+R KLS+CQ+EA
Sbjct: 237 AGILTFDNIQYLLRFMIDTDISGMSWVEAKAGKYRLLD--GREKLSNCQIEA 286
>gi|328786982|ref|XP_397109.3| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Apis mellifera]
Length = 942
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
KD + C +L +EP +++ +P +YS+QDL+ VK G L ++L++LV C+ H+
Sbjct: 814 FKDFLFTCRFATSVQDILKKEPNYIISEPHIYSIQDLMHVKYGILPMRLQELVQMCNMHI 873
Query: 380 YNCE 383
CE
Sbjct: 874 MGCE 877
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSI 330
S++ IL + +++ +P +YS+QDL+ VK G L ++L++LV C++
Sbjct: 826 SVQDILKKEPNYIISEPHIYSIQDLMHVKYGILPMRLQELVQMCNM 871
>gi|295661753|ref|XP_002791431.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279988|gb|EEH35554.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1110
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+++FG G + V YLY+ P P T + A ++ L
Sbjct: 130 AVKLFGVTENGHSVLLHVTHFLHYLYVAAPVSFVP---TDCEGFKAYLEAQLEFHQPAIH 186
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYE- 204
SVQ V + ++G+ ++++ +LKI + +P H++KL + NGA + +
Sbjct: 187 SVQMVMREN------LFGFQGNQKSPYLKITVTDPRHINKLRTTIENGAANYKGMWRGDV 240
Query: 205 ------SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKAE 255
+I YIL+F ID + GMS +E K+ LP ++S+CQ+EA +
Sbjct: 241 DGILTFDNIEYILRFMIDTGISGMSWVEAPASKYE-----LLPLTERVSNCQIEASIHYR 295
Query: 256 SIVVDMAANDSDVA 269
++ ND + A
Sbjct: 296 DLIAH--PNDGEWA 307
>gi|221053875|ref|XP_002261685.1| dna polymerase delta catalytic subunit [Plasmodium knowlesi strain
H]
gi|193808145|emb|CAQ38848.1| dna polymerase delta catalytic subunit,putative [Plasmodium
knowlesi strain H]
Length = 1096
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKD 146
VPVI ++ +G V VH FPY Y+ E +L +L ++ LN+ YK
Sbjct: 118 VPVIHIYTVTNDGYSALVSVHNFFPYFYVEMPSNFQKEDLL-KLECMMNDNLNMNNQYKM 176
Query: 147 SVQHVFHISICKKFP-MYGYHADERTFLKILLYEPYHMSKLE---DLLLNGAVFNERFQP 202
Q + +I I K MY ++ FLKI + P + L+ + ++N N
Sbjct: 177 YEQKIMNIEIVKTESLMYYKREGKKNFLKITVLLPKMVPTLKKYFEGIVNVNGKNIGGIV 236
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
YE+++P+IL++ ID + G S + F K+S+C E D+ E
Sbjct: 237 YEANLPFILRYIIDKKITGSSWLLCKKENFYIRPRHK--KISNCSFEIDISFE 287
>gi|380016496|ref|XP_003692219.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Apis florea]
Length = 941
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 321 LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
KD + C +L +EP +++ +P +YS+QDL+ VK G L ++L++LV C+ H+
Sbjct: 813 FKDFLFTCRFATSVQDILKKEPNYIISEPHIYSIQDLMHVKYGILPMRLQELVQMCNMHI 872
Query: 380 YNCE 383
CE
Sbjct: 873 MGCE 876
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSI 330
S++ IL + +++ +P +YS+QDL+ VK G L ++L++LV C++
Sbjct: 825 SVQDILKKEPNYIISEPHIYSIQDLMHVKYGILPMRLQELVQMCNM 870
>gi|156844887|ref|XP_001645504.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156116168|gb|EDO17646.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 1096
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGYK 145
V+R FG G V G YLY+P P E +L I++ L+ +
Sbjct: 135 VVRFFGVTDNGHSVLCNVTGFKHYLYVPAPMSAESPSNEDLL-GFVKHINEQLDNCV--- 190
Query: 146 DSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-----AVFNER 199
DS++ I +K ++GY D + F K+ L P ++K+ G + F+
Sbjct: 191 DSIE------IVEKQSIWGYSGDSKLPFWKVYLKTPNMINKVRTGFEKGHFSYKSWFSNG 244
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
Y+ +I Y L+ ID + GMS I K++ E K+S CQLE + + ++
Sbjct: 245 TTSYD-NIAYTLRLMIDCGIVGMSWITLPKQKYKMIPEKD--KVSTCQLEVKINYKDLIS 301
Query: 260 DMAAND 265
N+
Sbjct: 302 HAPENN 307
>gi|428184446|gb|EKX53301.1| DNA polymerase delta catalytic subunit, partial [Guillardia theta
CCMP2712]
Length = 910
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 33/200 (16%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH---HEPITETMLQQLAASIDKALNIALGYKDSVQ 149
FG EGK V + GV PY ++ +E + L + + + GY S Q
Sbjct: 1 FGVTQEGKSVHVAISGVLPYFFVNLPKALNEEECKVFLTKAIKKFESQASQNYGY-SSYQ 59
Query: 150 -----HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSK-------------LEDLLL 191
+ + S ++ ++GY +E +++IL P + + ++++
Sbjct: 60 ISESCRIVNCSYVRRRSIWGYQRNESHYMQILCSNPETVKRAATIFRHWDASLDMQEIFP 119
Query: 192 NGAVFNERFQPYESHIPYILQFCIDYN--LYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
G + FQ +ES++ I + D N + G I N +K+ SDS T +LSHC +
Sbjct: 120 KGPIV---FQTFESNVDPITRLTTDSNIVMSGWVQIPVNDLKW-SDSRT---RLSHCDI- 171
Query: 250 ADVKAESIVVDMAANDSDVA 269
DV A V DV+
Sbjct: 172 -DVAAHFSKVQALPEKEDVS 190
>gi|242817379|ref|XP_002486944.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713409|gb|EED12833.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1106
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 39/183 (21%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI-------PFHHEPITETMLQQLAASIDKALNIA 141
+++FG +G + V G YLYI P +P + + + A
Sbjct: 123 AVKLFGVTEKGNSVLLHVEGFRHYLYISAPVGFRPEDVQPYAKFLETKFA---------- 172
Query: 142 LGYKDSVQHVFH-ISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLLLNG-AVFNE 198
S +H+ H + + +K +YG+ + +++ L+I + EP H+S+L + L +++N
Sbjct: 173 -----SHEHMIHSVQLTQKENLYGFQGNLKSWYLRITVTEPKHISRLRNGLEKSISIYNY 227
Query: 199 R-----------FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQ 247
+ Y+ +I Y+L+F ID + GMS +E ++ E + S+CQ
Sbjct: 228 KGLWSSAGDDGGIMTYD-NIQYVLRFMIDTGISGMSWVEAKAGDYQLVPEAK--RQSNCQ 284
Query: 248 LEA 250
+EA
Sbjct: 285 IEA 287
>gi|226289255|gb|EEH44767.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb18]
Length = 1110
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+++FG G + V YLY+ P P T + A ++ L
Sbjct: 130 AVKLFGVTENGHSVLLHVTHFLHYLYVAAPVAFVP---TDCEGFKAYLEAQLEFHQPAIH 186
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYE- 204
SVQ V + ++G+ ++++ +LKI + +P H++KL + NGA + +
Sbjct: 187 SVQMVMREN------LFGFQGNQKSPYLKITVTDPRHINKLRTTIENGAANYKGMWRGDV 240
Query: 205 ------SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADV 252
+I YIL+F ID + GMS +E K+ LP ++S+CQ+EA +
Sbjct: 241 DGILTFDNIEYILRFMIDTGISGMSWVEAPASKYE-----LLPLTERVSNCQIEASI 292
>gi|225682079|gb|EEH20363.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb03]
Length = 1110
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+++FG G + V YLY+ P P T + A ++ L
Sbjct: 130 AVKLFGVTENGHSVLLHVTHFLHYLYVAAPVAFVP---TDCEGFKAYLEAQLEFHQPAIH 186
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYE- 204
SVQ V + ++G+ ++++ +LKI + +P H++KL + NGA + +
Sbjct: 187 SVQMVMREN------LFGFQGNQKSPYLKITVTDPRHINKLRTTIENGAANYKGMWRGDV 240
Query: 205 ------SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADV 252
+I YIL+F ID + GMS +E K+ LP ++S+CQ+EA +
Sbjct: 241 DGILTFDNIEYILRFMIDTGISGMSWVEAPASKYE-----LLPLTERVSNCQIEASI 292
>gi|71412800|ref|XP_808567.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70872801|gb|EAN86716.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1029
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYK 145
PV+R++G EG V + PYL+I P P +L+ LN L
Sbjct: 48 PVVRLYGVTKEGHSVLVHCYNYEPYLWIKAPKGWLPAYSQLLK-------AELNAQL--- 97
Query: 146 DSVQH----VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLN------GA 194
DS+ H + I + K+ + Y + T LKI++ P H+ +L LL + GA
Sbjct: 98 DSLTHASDTIVRIEVHKRQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGA 157
Query: 195 VFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
R F YES++ + L+F +D + G + + + F + +E + S CQ+E
Sbjct: 158 WDGVRVFPTYESNVIFPLRFIVDNGISGCNWLTIPVGSFCTATE----RTSTCQIELCCS 213
Query: 254 AESI 257
E++
Sbjct: 214 HEAV 217
>gi|50293371|ref|XP_449097.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528410|emb|CAG62067.1| unnamed protein product [Candida glabrata]
Length = 1096
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE--TMLQQLAASIDKALNIALGYKD 146
V+R+FG EG V G YLY+P + + LQ+ + +++ A+ D
Sbjct: 135 VVRLFGVTSEGHSILCNVTGFKHYLYVPAPNSANAQDPQELQKFISYVNQMYENAI---D 191
Query: 147 SVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-----AVFNERF 200
S++ + K+ ++GY D F K+ P +KL G + F
Sbjct: 192 SIE------VVKRQSIWGYSGDTMLPFWKVYTTHPSATNKLRTAFEKGHFNYNSWFANGT 245
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--SDSETSLPKLSHCQLEADVKAESIV 258
Y+ +I Y L+ +D + GMS + K+ SDS+ K+S CQLE + +++
Sbjct: 246 TTYD-NIAYTLRLMVDCKIVGMSWVTLPKGKYNVVSDSQ----KVSTCQLEVTINYRNLI 300
>gi|366990559|ref|XP_003675047.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
gi|342300911|emb|CCC68676.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
Length = 1099
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V+R FG EG V G YLY+P + + Q+ ++ LN D+
Sbjct: 138 VVRFFGVTSEGYSVLCNVTGFKHYLYVPQPNSDDAKDPQQR-----ERFLNYLNEMFDN- 191
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-----AVFNERFQP 202
V I + +K ++GY D + F K+L+ P ++KL G + F+
Sbjct: 192 -GVDSIEVVEKQSIWGYSGDGKLPFWKVLVTYPSLINKLRTGFEKGHYTYNSWFSNGTTT 250
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKAESIVV 259
Y+ +I Y L+ +D + GMS I K+ T +P KLS CQLE + + +V
Sbjct: 251 YD-NIAYPLRLMVDCGIVGMSWITLPKGKY-----TLIPDNKKLSTCQLELTINYKDLVA 304
Query: 260 DMAAND 265
A D
Sbjct: 305 HPAEGD 310
>gi|154344040|ref|XP_001567964.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065298|emb|CAM40726.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1032
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 76 HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAAS 133
H + + +VPV+R++G EG V + PYL+I P + P+ Q
Sbjct: 41 HETVSRVRHTEVPVVRLYGVTAEGFSVLVHCYNYEPYLWIEAPRNWLPVHS---QGFVRE 97
Query: 134 IDKALNIALGYKDSVQHV-FHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN 192
++ L+ +D+V V H ++ MY LKI++ P H+ KL LL +
Sbjct: 98 LNNQLSNQTRLQDTVVRVEVHQ---RRSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLSD 154
Query: 193 ------GAVFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP-KLS 244
GA R F +ES++ + L+F +D + G + + KF S P K S
Sbjct: 155 RGVSCPGAWDGIRIFPTFESNVIFPLRFLVDNEIGGSNWLTLTSGKF-----VSCPLKTS 209
Query: 245 HCQLEADVKAESI 257
CQ+E E +
Sbjct: 210 TCQIEVACSHEDV 222
>gi|145533052|ref|XP_001452276.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419964|emb|CAK84879.1| unnamed protein product [Paramecium tetraurelia]
Length = 725
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITET-----MLQQLAASIDKALNIALGY 144
IR+FG + + + + FPY YIPF + + + L Q + K IA
Sbjct: 77 IRLFGITDQQQSLEIKIIDYFPYFYIPFPSKLVRDDKDIDYFLHQFNNHLYKNGIIAESQ 136
Query: 145 KDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL-----LNGAVFNER 199
V I + + Y + FLK+ Y M K+ L+ LNG F +
Sbjct: 137 PIREITVVESEIIRNYKGQNYQKE--PFLKLSFYNVSSMKKVAQLIEKGLNLNGFQFAK- 193
Query: 200 FQPYESHIPYILQFCIDYNLYGMSNIEFNMVK-FRSDSETSLPKLSHCQLEADVKAESI 257
Q YE I Y L+F ID NL GM + M K + D E S+CQ K E I
Sbjct: 194 -QTYECRITYPLKFMIDLNLRGMG---WAMAKNLKEDGE------SNCQKSYLAKTEDI 242
>gi|123496446|ref|XP_001326973.1| polymerase zeta subunit [Trichomonas vaginalis G3]
gi|121909895|gb|EAY14750.1| polymerase zeta subunit, putative [Trichomonas vaginalis G3]
Length = 1045
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLY--IPFHHEPITETMLQQLAASIDKALNIALG 143
+V V+ + G + EG VHGV PY Y IP++ T L++L ++ AL+
Sbjct: 61 EVAVVDIHGCDNEGHSILCHVHGVIPYFYTSIPYN---FTAEGLEELKNKLNSALS---P 114
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF-----N 197
+ V+ +K +YG+ + ++ ++K+ P H++ +L + + +
Sbjct: 115 FNKGNLVVYSCEFVEKRNIYGFTKEAKSRYVKVCTTLPKHVASCRRVLESNQIQLSCSPS 174
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
FQ +ES++ +I+++ D + G S ++ + D + S Q E D SI
Sbjct: 175 YSFQTFESNVDFIIRYMDDVGITGCSWLKLEAQNY--DIRRVNDRRSINQFEIDCNYNSI 232
Query: 258 V 258
+
Sbjct: 233 I 233
>gi|345494177|ref|XP_003427237.1| PREDICTED: hypothetical protein LOC100122809 [Nasonia vitripennis]
Length = 891
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 321 LKDLVSACSIFRMRAILLGQEPHLLM-DPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
LKD + AC + L +EP +M DP VYS+ + VK+G L L+L LV C HV
Sbjct: 762 LKDFLFACRFAKETEEALRREPDYIMTDPHVYSIHNFSQVKTGILPLELSKLVQECCKHV 821
Query: 380 YNC 382
C
Sbjct: 822 AEC 824
>gi|3480|emb|CAA33504.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 1093
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 26/188 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP------FHHEPITETMLQQLAASIDKALNIAL 142
V+R FG EG V G YLY+P + + + L + D+A++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSSDANDQEQINKFVHYLNETFDRAID--- 192
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERF 200
I + K ++ Y D + F KI + P+ ++KL G + FN F
Sbjct: 193 ----------SIEVVSKQSIWDYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWF 242
Query: 201 QPYES---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
+ +I Y L+ +D + GMS I K+ + ++S CQLE + ++
Sbjct: 243 SNGTTTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNL 300
Query: 258 VVDMAAND 265
+ A D
Sbjct: 301 IAHPAEGD 308
>gi|448103715|ref|XP_004200106.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359381528|emb|CCE81987.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 17/181 (9%)
Query: 83 VIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL 142
+I + R FG EG V Y Y+P ++ L Q +
Sbjct: 105 MIDGLSSARFFGITEEGYSVLCEVRNFLHYFYVPVPKGFFRDSHLTQFENYL-------- 156
Query: 143 GYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERF 200
K++ Q V IC K ++G++ + ++ FLKI + ++SK+ G + F F
Sbjct: 157 --KNNYQGVCKAEICLKESIWGFNNNVKSPFLKIYVDNSKNISKIRGSFERGEIRFENLF 214
Query: 201 QPYE---SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
P +I Y+L+ +D + GMS + K+ S+ K+S CQLE + I
Sbjct: 215 PPQNVTYDNINYLLRLMVDCKISGMSWLTLPKGKYGMISD--FEKVSTCQLECFIDYRDI 272
Query: 258 V 258
+
Sbjct: 273 I 273
>gi|254577417|ref|XP_002494695.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
gi|238937584|emb|CAR25762.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
Length = 1090
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
++R FG +G V G YLY+P P E AS K LN +++SV
Sbjct: 129 IVRFFGVTKDGHSILCNVTGFKHYLYVPVPSAP--EAQDPNEVASFTKYLN--ENFENSV 184
Query: 149 QHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-----AVFNERFQP 202
I I K ++GY + F ++ + P ++K+ G + F+
Sbjct: 185 D---RIDIVSKQSIWGYEGESMLPFYQVFVTNPNTVNKMRTAFEKGYLSHKSWFSAGTTT 241
Query: 203 YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMA 262
Y+ +I + L+ ID + GMS I +++ E ++S CQLE + +V A
Sbjct: 242 YD-NIAFTLRMMIDCGISGMSWITLPKGEYQLVPEHE--RVSTCQLEVTINYRKLVSHPA 298
Query: 263 ANDSDVAT 270
N+ A+
Sbjct: 299 ENEWSQAS 306
>gi|340721043|ref|XP_003398936.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Bombus terrestris]
Length = 943
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 299 MDPDVYSMQDLLDVKSGALYLKL---KDLVSACSI-FRMRAILLGQEPHLLMDPDVYSMQ 354
++P +Y L ++ L L+L KD + C ++ +L + +++ +P VYS+Q
Sbjct: 791 LNPSLYRRIKQL-ARTRLLRLQLFFFKDFLFTCRFATSVQDVLKKESNYMISEPHVYSIQ 849
Query: 355 DLLDVKSGALYLKLKDLVSACSSHVYNCE 383
DL+ VK G L ++L++LV C+ H+ CE
Sbjct: 850 DLMHVKYGILPMRLQELVEMCNMHIMGCE 878
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSI 330
S++ +L + +++ +P VYS+QDL+ VK G L ++L++LV C++
Sbjct: 827 SVQDVLKKESNYMISEPHVYSIQDLMHVKYGILPMRLQELVEMCNM 872
>gi|212530840|ref|XP_002145577.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074975|gb|EEA29062.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
Length = 1105
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHE---PITETMLQQLAASIDKALNIA 141
+++FG +G + V G YLYI FH E P T + Q+
Sbjct: 123 AVKLFGVTEKGNSVLLHVEGFRHYLYIAAPVGFHPEDVKPYTSFLEQRF----------- 171
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHADERTF-LKILLYEPYHMSKLEDLLLNGAVFNERF 200
G + + H +++ +K +YG+ + +++ +KI + +P H+S+L + L ++ N +
Sbjct: 172 -GMHERMIH--SVNLAQKENLYGFQGNLKSWYIKITVTDPKHISRLRNGL-EKSIANYNY 227
Query: 201 QPYE-----------SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
+ +I Y+L+F ID + GMS +E + E + S+CQ+E
Sbjct: 228 KGLWPSGDDGGVVTFDNIQYVLRFMIDTGISGMSWVEAKAGDYELVPEAK--RQSNCQIE 285
Query: 250 ADVKAESIVV 259
A + S+V
Sbjct: 286 AFMPYTSLVA 295
>gi|448536009|ref|XP_003871049.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis Co
90-125]
gi|380355405|emb|CCG24924.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis]
Length = 1147
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 28/185 (15%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQ----LAASIDKALNIALGYKD 146
R FG EG V G Y Y P + + L Q L A+ D +++ + K+
Sbjct: 180 RFFGITQEGYSVLCNVTGFIHYFYSPVPKGFVKDQHLMQFTSYLKANYDGVVDVQIQMKE 239
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
S+ +GY+ + +T F KI + ++++L + E P +
Sbjct: 240 SI--------------WGYNNNIKTPFFKIYVNNNRNITRLRGAFEKAEIRFEDLFPIQQ 285
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
+I Y+L+ ID N+ GMS I K++ S K+S CQ+E + + ++
Sbjct: 286 SVTYDNINYLLRLMIDCNITGMSWITLPRTKYKLRSS----KISTCQIECSIDYKDLIAH 341
Query: 261 MAAND 265
+ +
Sbjct: 342 QSEKE 346
>gi|1706511|sp|P52342.1|DPOL_HHV7J RecName: Full=DNA polymerase
gi|1139640|gb|AAC54700.1| DNA polymerase [Human herpesvirus 7]
Length = 1012
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VI++FG GKK C+ V G Y Y + + ++L + I
Sbjct: 104 QYRHFVIPSGNVIKLFGKTECGKKVCINVFGQNSYFYCEYQCK-------KELNSRICSL 156
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF 196
LN + + + F I K+ YGY+ + + K+ Y +++ +LLN V
Sbjct: 157 LNSS---EIKMSCSFSIESVTKYNFYGYNTEPIKNLFKLSFSNFYISNRIGKILLNEGV- 212
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
YE+ + + +F ID NL + N + + +++S
Sbjct: 213 ----SVYEAEVEILNRFFIDNNLKSFGWYQINYLSIQEFAKSS 251
>gi|51874260|ref|YP_073778.1| DNA polymerase catalytic subunit [Human herpesvirus 7]
gi|2746268|gb|AAC40752.1| U38 [Human herpesvirus 7]
Length = 1013
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VI++FG GKK C+ V G Y Y + + ++L + I
Sbjct: 104 QYRHFVIPSGNVIKLFGKTECGKKVCINVFGQNSYFYCEYQCK-------KELNSRICSL 156
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF 196
LN + + + F I K+ YGY+ + + K+ Y +++ +LLN V
Sbjct: 157 LNSS---EIKMSCSFSIESVTKYNFYGYNTEPIKNLFKLSFSNFYISNRIGKILLNEGV- 212
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETS 239
YE+ + + +F ID NL + N + + +++S
Sbjct: 213 ----SVYEAEVEILNRFFIDNNLKSFGWYQINYLSIQEFAKSS 251
>gi|383864639|ref|XP_003707785.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Megachile rotundata]
Length = 944
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 299 MDPDVYSMQDLLDVKSGALYLKL---KDLVSACSI-FRMRAILLGQEPHLLMDPDVYSMQ 354
++P +Y LD ++ L +L KD + C ++ +L + ++L +P VYS+Q
Sbjct: 791 LNPSLYRRIKQLD-RTRLLRTQLYFFKDFLLTCRFATSIQEVLKKESSYILNEPHVYSIQ 849
Query: 355 DLLDVKSGALYLKLKDLVSACSSHVYNCE 383
DL+ VK G L +L++LV C+ H CE
Sbjct: 850 DLMHVKYGILPTRLQELVQICNVHTVGCE 878
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 285 SMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSI 330
S++ +L + ++L +P VYS+QDL+ VK G L +L++LV C++
Sbjct: 827 SIQEVLKKESSYILNEPHVYSIQDLMHVKYGILPTRLQELVQICNV 872
>gi|256274101|gb|EEU09012.1| Pol3p [Saccharomyces cerevisiae JAY291]
Length = 1097
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGY-KDS 147
V+R FG EG V G YLY+P + A+ + +N + Y ++
Sbjct: 136 VVRFFGVTSEGHSVLCNVTGFKNYLYVPAPNSS---------DANDQEQINKFVHYLNET 186
Query: 148 VQHVF-HISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
H I + K ++GY + F KI + P+ ++KL G + FN F
Sbjct: 187 FDHAIDSIEVVSKQSIWGYSGGTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGT 246
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
+ +I Y L+ +D + GMS I K+ + ++S CQLE + +++
Sbjct: 247 TTYDNIAYTLRLMVDCGIVGMSWITLPKGKYSMIEPNN--RVSSCQLEVSINYRNLIAHP 304
Query: 262 AAND 265
A D
Sbjct: 305 AEGD 308
>gi|195132839|ref|XP_002010847.1| GI21481 [Drosophila mojavensis]
gi|193907635|gb|EDW06502.1| GI21481 [Drosophila mojavensis]
Length = 907
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 299 MDPDVYSMQDLLDVKSGALYLKLKDL---VSACSIFRMRAILLGQEP-HLLMDPDVYSMQ 354
++ +Y Q L K+ L+LKD+ +SAC L P H+ DPD++SM
Sbjct: 757 LNAQLYVKQKQL-AKARRRRLQLKDVHNFISACRFATKEQALFDAVPAHITKDPDMWSMC 815
Query: 355 DLLDVKSGALYLKLKDLVSACSSHVYNC 382
D +DV++ +L + +L+ HVY+C
Sbjct: 816 DFVDVQNSSLCRSIDELIELNEQHVYSC 843
>gi|150866455|ref|XP_001386065.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
gi|149387711|gb|ABN68036.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
Length = 1070
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 27/207 (13%)
Query: 63 IPFHHEPITETIVHSEL--RNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP---- 116
+P +P + + +L I + R FG EG V G Y Y+P
Sbjct: 71 LPETFDPTIDDVSFQQLDAEEFQIGDYTIARYFGITEEGHSVLCNVTGFVHYFYVPVPKG 130
Query: 117 FHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKI 175
F+ + + L A+ + NI L K+S+ +GY+ +T F K
Sbjct: 131 FYKDQHLDQFSSYLRANYEGVENIELALKESI--------------WGYNKSVKTPFFKF 176
Query: 176 LLYEPYHMSKLEDLLLNGAV-FNERFQPYE---SHIPYILQFCIDYNLYGMSNIEFNMVK 231
+ +++KL G + F F P +I Y+L+ ID + GMS + K
Sbjct: 177 FINNTKNITKLRSAFERGEIRFENLFPPQNVSYDNINYLLRLMIDCKVTGMSWVTLPKGK 236
Query: 232 FRSDSETSLPKLSHCQLEADVKAESIV 258
F S K+S CQ+E + + ++
Sbjct: 237 F--SLVHSNDKVSTCQIECSINYKDLI 261
>gi|294660060|ref|XP_002770696.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
gi|199434442|emb|CAR66020.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
Length = 1080
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQH 150
R FG EG V G Y Y+P P Q L+ I+ N + Q
Sbjct: 114 RFFGVTREGHSVLCNVTGFLHYFYVPV---PKGFFKDQHLSGFINYMNN-------NYQG 163
Query: 151 VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES---- 205
V I I K ++GY+ + +T F K+++ ++SK+ G + E P ++
Sbjct: 164 VHDIEIKLKESIWGYNKNLKTPFFKVIVNNSKNISKIRTAFERGEIRYENLFPPQNVSYD 223
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND 265
+I Y+L+ +D + GMS I + K + + S ++S CQ+E + ++ + D
Sbjct: 224 NINYLLRLMVDCKITGMSWI--TLPKGKYEIVESFVQISTCQIECSIDYRDLISHPSEGD 281
>gi|407396863|gb|EKF27570.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 1029
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 71 TETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQ 128
T+ H + + + P++R++G EG V + PYL+I P P +L+
Sbjct: 31 TKGCAHPTVSRVRHAENPIVRLYGVTKEGHSVLVHCYNYEPYLWIKAPKGWLPAYSQLLK 90
Query: 129 QLAASIDKALNIALGYKDSVQH----VFHISICKKFPMYGYHADERT-FLKILLYEPYHM 183
LN L DS+ H V I + K+ + Y + T LKI++ P H+
Sbjct: 91 -------AELNAQL---DSLTHASDTVVRIEVHKRQSIMYYQGEGLTEHLKIVVQLPQHI 140
Query: 184 SKLEDLLLN------GAVFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDS 236
+L LL + GA R F YES++ + L+F +D + G + + + F +
Sbjct: 141 PRLRTLLSDRGVACAGAWDGVRVFPTYESNVIFPLRFIVDNCISGCNWLTIPVGSFLIAT 200
Query: 237 ETSLPKLSHCQLEADVKAESI 257
E + S CQ+E E++
Sbjct: 201 E----RTSTCQIELCCSHEAV 217
>gi|452986964|gb|EME86720.1| hypothetical protein MYCFIDRAFT_202624 [Pseudocercospora fijiensis
CIRAD86]
Length = 1089
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 43/183 (23%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPF-------HHEPIT---ETMLQQLAASIDKAL 138
+++FG EG + V YLY+ EP E+ + Q +A+I
Sbjct: 109 TVKLFGVTEEGHSVLLHVTDFLHYLYVAAPVSFTKNDCEPFKVFLESSMAQHSAAIH--- 165
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVF 196
SVQ V + MYG+ + ++ +LKI + +P ++S+L + G A +
Sbjct: 166 --------SVQMVLREN------MYGFQGNTKSPYLKITVTDPKYISRLRTAIETGNANY 211
Query: 197 NERFQPYESHI------PYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQ 247
++ E I Y+L+F +D + GMS + N K+ T LP + CQ
Sbjct: 212 KGMWKVAEGGILTFDMIAYVLRFMVDTKMAGMSWVGINAGKY-----TMLPERDRQGQCQ 266
Query: 248 LEA 250
+EA
Sbjct: 267 IEA 269
>gi|448099944|ref|XP_004199250.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359380672|emb|CCE82913.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQH 150
R FG EG V Y Y+P ++ L Q + K + Q
Sbjct: 113 RFFGITEEGYSVLCEVRNFLHYFYVPVPKGFFRDSHLSQFENYL----------KSNYQG 162
Query: 151 VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE---S 205
+ IC K ++G++ + ++ FLKI + ++SK+ G + F F P
Sbjct: 163 ICKAEICLKESIWGFNNNVKSPFLKIYVDNTKNISKIRGSFERGEIRFENLFPPQNVTYD 222
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+I Y+L+ +D + GMS + K+ S+ K+S CQLE + I+
Sbjct: 223 NINYLLRLMVDCKISGMSWLTLPKGKYGMISD--FEKVSTCQLECFIDYRDII 273
>gi|302911020|ref|XP_003050401.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731338|gb|EEU44688.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1104
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG N G + V YLY+P P+ Q A+ L +
Sbjct: 124 TVKLFGVNEAGNSVMLHVTDFKHYLYVP---APVN--FQPQDCAAFKAYLETQVAQHQPT 178
Query: 149 QHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES-- 205
H ++ + +YG+ ++ + +LK+ + +P ++K+ + +G +R +
Sbjct: 179 IH--SVAFAMRESIYGFQGNQSKPYLKVTVTDPKFINKVRSTIQHGNANWKRMWKNDGEI 236
Query: 206 ----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+I Y+L+F +D + GMS +E F+ E + S+CQ+EA+V
Sbjct: 237 QTFDNIQYVLRFMVDCKVRGMSWVEAPAKTFQLLPENL--RQSNCQIEAEV 285
>gi|354548476|emb|CCE45212.1| hypothetical protein CPAR2_702240 [Candida parapsilosis]
Length = 1080
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 28/185 (15%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQ----LAASIDKALNIALGYKD 146
R FG EG V G Y Y P + + L Q L A+ D +N+ + K+
Sbjct: 113 RFFGITQEGYSVLCSVTGFIHYFYSPVPKGFVKDQHLMQFTSYLKANYDGVVNVQIQMKE 172
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
S+ +GY+ + +T F KI + ++++L + E P +
Sbjct: 173 SI--------------WGYNNNIKTPFFKIYVNNNRNITRLRGAFEKAEIRFEDLFPIQQ 218
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
+I Y+L+ ID ++ GMS I K++ S K+S CQ+E + + ++
Sbjct: 219 SVTYDNINYLLRLMIDCSITGMSWITLPKGKYKIKSN----KISTCQIECSIDYKDLIAH 274
Query: 261 MAAND 265
+ +
Sbjct: 275 QSEKE 279
>gi|453087535|gb|EMF15576.1| DNA polymerase delta catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1107
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 37/180 (20%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLY----IPFHH---EPIT---ETMLQQLAASIDKAL 138
+++FG +G + V YLY I F EP E+ L Q +A I
Sbjct: 127 TVKLFGVTEQGNSVLLHVTDFLHYLYVAAPIAFTKNDCEPYKVFLESTLAQHSAVIH--- 183
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVF 196
SVQ V + ++G+ + ++ +LKI + +P ++S+L + G A +
Sbjct: 184 --------SVQMVLREN------LFGFQGNTKSPYLKITVTDPKYISRLRTAIQGGSANY 229
Query: 197 NERFQPYES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
++ E +I Y+L+F ID +L GMS + N K+ + + S CQ+EA
Sbjct: 230 KGLWKAAEGGILTFDNIQYVLRFMIDTSLAGMSWVSVNAAKYHMVPQQD--RQSQCQIEA 287
>gi|169615194|ref|XP_001801013.1| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
gi|160702905|gb|EAT82147.2| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
Length = 1115
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 80 RNLVIQKV-----------PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPI-TET 125
+NLV Q++ +++FG G V V G Y Y+ P +P +
Sbjct: 103 QNLVFQQIEAEEGVLNGGRTTVKLFGVTENGNSVLVHVTGFMHYFYVAAPIGFQPQDCDA 162
Query: 126 MLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMS 184
L + K LN SVQ +I + Y ++++ +LKI + +P ++
Sbjct: 163 YKIYLESECQKQLNQHSAVIYSVQMTMRENILR------YQGNQKSPYLKITVIDPKMIN 216
Query: 185 KLEDLLLNGAVFNERFQPYE-------SHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSE 237
++ ++ G +R P +I Y+L+F ID + GMS +E K++ +
Sbjct: 217 RVRTMVSKGFANWKRLWPSGHDEILTFDNITYVLRFMIDTKMAGMSWVEVPAGKYKMLNP 276
Query: 238 TSLPKLSHCQLEADVKAESIVVDMAAND 265
+ S+CQ+EA + ++ ++ +
Sbjct: 277 RD--RHSNCQIEAQLHYSDLIAHLSEGE 302
>gi|195043993|ref|XP_001991732.1| GH11907 [Drosophila grimshawi]
gi|193901490|gb|EDW00357.1| GH11907 [Drosophila grimshawi]
Length = 916
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 321 LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
++DL+ AC P H+ DPD++SM D +DV++ ++ ++ L+ HV
Sbjct: 791 VRDLIVACRFATKEQAFFDAVPAHITNDPDMWSMCDFVDVQNKSMTRSIEQLIGLSEQHV 850
Query: 380 YNC 382
YNC
Sbjct: 851 YNC 853
>gi|397565087|gb|EJK44470.1| hypothetical protein THAOC_36985 [Thalassiosira oceanica]
Length = 1658
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 33/127 (25%)
Query: 172 FLKILLYEPYHMSKLEDLLLNGAVFNERFQP----------------------------- 202
FL++ Y+P H +++ L G NE + P
Sbjct: 270 FLRVEYYDPSHRWRVKMALERGLELNEMYHPDPIRYDYTNEDLRNEGHFVCHGAEDSQPL 329
Query: 203 ----YESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
YE+HIPY +Q D NL GM I+ V+FRS SL + + + E
Sbjct: 330 KFRCYEAHIPYTMQVFKDCNLAGMKYIKVGGVRFRSPLPRSLRRRTKDEFSEGKTFEGTQ 389
Query: 259 VDMAAND 265
+ A+D
Sbjct: 390 ANGMADD 396
>gi|71406868|ref|XP_805939.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70869536|gb|EAN84088.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 833
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYK 145
PV+R++G EG V + PYL+I P P +L+ LN L
Sbjct: 48 PVVRLYGVTKEGHSVLVHCYNYEPYLWIKAPKGWLPAYSQLLK-------AELNAQL--- 97
Query: 146 DSVQH----VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLN------GA 194
DS+ H + I + + + Y + T LKI++ P H+ +L LL + GA
Sbjct: 98 DSLTHASDTIVRIEVHNRQSIMYYQGEGLTEHLKIVVQLPQHIPRLRTLLSDRGVACAGA 157
Query: 195 VFNER-FQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVK 253
R F YES++ + L+F +D ++ G + + + F +E + S CQ+E
Sbjct: 158 WDGVRVFPTYESNVIFPLRFIVDNDISGCNWLTIPVGSFCIATE----RTSTCQIELCCS 213
Query: 254 AESI 257
E++
Sbjct: 214 HEAV 217
>gi|258566822|ref|XP_002584155.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
gi|237905601|gb|EEP80002.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
Length = 834
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 149 QHVFH-ISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES 205
Q V H +++ K ++G+ ++R +LKI + +P H++ + ++ NG + ++ +
Sbjct: 181 QEVIHSVTMGMKENLFGFQGNQRNPYLKITVTDPKHINVVRSIIENGDGNYKGLWKVIDG 240
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
+I YIL+F ID + GMS +E K++ + + S+CQ+EA V ++
Sbjct: 241 ILTFDNIQYILRFMIDTGISGMSWVEVPPSKYK--IVPAHARQSNCQIEATVSYRDLIA 297
>gi|255731752|ref|XP_002550800.1| DNA polymerase delta catalytic subunit [Candida tropicalis
MYA-3404]
gi|240131809|gb|EER31368.1| DNA polymerase delta catalytic subunit [Candida tropicalis
MYA-3404]
Length = 1079
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV-Q 149
R FG EG+ V G Y Y P+ + L+ D+ LN + Y + +
Sbjct: 112 RFFGITKEGRSVLCNVTGFVHYFY-----SPVPKGFLK------DEHLNDFVSYLQARHE 160
Query: 150 HVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES-- 205
+ + I K ++GY+ + +T + KI + +++K+ G + FN+ F P ES
Sbjct: 161 GIEKVEIKLKESIWGYNKNIKTPYFKIYVNGNRNITKVRGAFERGQIQFNDMF-PSESVT 219
Query: 206 --HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+I Y+L+ ID + GMS I K++ ++ K+S CQ+E + ++
Sbjct: 220 YDNINYLLRLMIDCKITGMSWITLPKTKYKLVTK----KISTCQIECSIDYRDLI 270
>gi|403413674|emb|CCM00374.1| predicted protein [Fibroporia radiculosa]
Length = 1060
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 32/169 (18%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQ 149
IR+FG G V G PY Y+ TE+ ++ A + A+
Sbjct: 114 IRMFGVTEAGHSVLATVTGFLPYFYVATPR-GFTESDTFAFCDHLNNAGSGAV------- 165
Query: 150 HVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPY 209
V + + KK ++GY D+ L P H +ES+I Y
Sbjct: 166 -VRGVELVKKRSLWGYKGDDWQ-----LNYPLHA----------------VPTFESNIAY 203
Query: 210 ILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
L+F ID + GM+ IE K++ K S CQ+E VK + V
Sbjct: 204 TLRFMIDTRVVGMNWIEIPAKKYKLIRGEK--KRSKCQIELTVKWDQFV 250
>gi|195480047|ref|XP_002101117.1| GE15796 [Drosophila yakuba]
gi|194188641|gb|EDX02225.1| GE15796 [Drosophila yakuba]
Length = 830
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSIF-RMRAILLGQEPHLLMDPDVYSMQDL 356
++ +Y ++L + L L+ +K ++ C R +A H+ DPD++SM D
Sbjct: 680 LNSQLYKHKELAKARKRRLQLQAVKGFIANCRFATREQAFFNAIPAHITQDPDMWSMCDF 739
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K++++ HV NC
Sbjct: 740 VDVQNTSMNRSIKEVIALSEQHVQNC 765
>gi|406701433|gb|EKD04579.1| hypothetical protein A1Q2_01151 [Trichosporon asahii var. asahii
CBS 8904]
Length = 912
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 73/200 (36%), Gaps = 41/200 (20%)
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
P T+T+V + + Q P +R+FG G VHG PY Y+ LQ
Sbjct: 54 PATDTLVAE---SSLPQFGPTLRLFGVTKGGNSMLAHVHGFRPYFYV-----AAPSGFLQ 105
Query: 129 QLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLE 187
+ LN V I + ++GY D+ F+KI+ EP + K++
Sbjct: 106 SDLTPLKDTLNTG------SLAVADCEIANRKSLWGYRGDDNVPFIKIVCTEPKALPKVK 159
Query: 188 DLLLNGAVFNERFQPYESHI----------------PYILQFCIDYNLYGMSNIEFNMVK 231
D + QP + + +L D L GM+ +E K
Sbjct: 160 DRSPASGL----VQPGDDDVRKQHSVSSSLHDRHQGTRVLDAAADVQLVGMNWVEVPAGK 215
Query: 232 FR--SDSETSLPKLSHCQLE 249
+ SE K S CQLE
Sbjct: 216 YSVLRGSE----KRSRCQLE 231
>gi|327300054|ref|XP_003234720.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
gi|326463614|gb|EGD89067.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
Length = 1111
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG + G + V G YLYI P++ T Q L L + V
Sbjct: 130 AVKLFGVSENGNSVLLHVTGFMHYLYIA---APVSFT--QADCVPFKAYLENQLSVTEPV 184
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P ++ + +++GA + ++ E
Sbjct: 185 IHSVQMTM--RENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGE 242
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQLEADVKAESI 257
+I Y+L+F ID + GMS +E K+ LP S+CQ+EA V
Sbjct: 243 ILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYE-----VLPPGQCQSNCQIEASVHYR-- 295
Query: 258 VVDMAA--NDSDVA 269
DM A ND + A
Sbjct: 296 --DMTAHPNDGEWA 307
>gi|401882228|gb|EJT46496.1| hypothetical protein A1Q1_04928 [Trichosporon asahii var. asahii
CBS 2479]
Length = 912
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 73/200 (36%), Gaps = 41/200 (20%)
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
P T+T+V + + Q P +R+FG G VHG PY Y+ LQ
Sbjct: 54 PATDTLVAE---SSLPQFGPTLRLFGVTKGGNSMLAHVHGFRPYFYV-----AAPSGFLQ 105
Query: 129 QLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLE 187
+ LN V I + ++GY D+ F+KI+ EP + K++
Sbjct: 106 SDLTPLKDTLNTG------SLAVADCEIANRKSLWGYRGDDNVPFIKIVCTEPKALPKVK 159
Query: 188 DLLLNGAVFNERFQPYESHI----------------PYILQFCIDYNLYGMSNIEFNMVK 231
D + QP + + +L D L GM+ +E K
Sbjct: 160 DRSPASGL----VQPGDDDVRKQHSVSSSLHDRHQGTRVLDAAADVQLVGMNWVEVPAGK 215
Query: 232 FR--SDSETSLPKLSHCQLE 249
+ SE K S CQLE
Sbjct: 216 YSVLRGSE----KRSRCQLE 231
>gi|403221257|dbj|BAM39390.1| DNA polymerase delta catalytic subunit [Theileria orientalis strain
Shintoku]
Length = 1072
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK 145
+VP+IR++G + + V + PY YI + + L + L+ +K
Sbjct: 68 EVPIIRLYGVTKQEQSVLVSLQNFNPYFYIE-KPAALLDRHFDDLKELFTRHLSEQNQFK 126
Query: 146 DSVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG---AVFNE--- 198
S+++V I + + Y + E+ FLKI + P +S L + +G V+++
Sbjct: 127 RSLRYVLDIQKVRLTSLMLYDENSEKDFLKITVSVPRMVSNLRTFIESGIYLKVYDQDRN 186
Query: 199 ------RFQPYESHIPYILQFCIDYNLYGMS 223
Q YE+++PY L+F +D N+ S
Sbjct: 187 EVRVAFSRQTYEANLPYTLRFLLDCNIVSGS 217
>gi|195565797|ref|XP_002106485.1| GD16910 [Drosophila simulans]
gi|194203861|gb|EDX17437.1| GD16910 [Drosophila simulans]
Length = 825
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDL 356
++ +Y ++L + L L+ +K ++ C P H+ DPD++SM D
Sbjct: 675 LNSQLYKHKELAKARKRRLQLQTVKGFIANCRFATREQSFFNAIPAHITQDPDMWSMCDF 734
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K++++ HV+NC
Sbjct: 735 VDVQNTSMNRSIKEVIALSEQHVHNC 760
>gi|146421489|ref|XP_001486690.1| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC
6260]
Length = 1075
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+ R FG EG V G Y YIP + + L Q L ++ Y
Sbjct: 107 IARFFGVTAEGYSVLCNVTGFRHYFYIPVPRGFMQDRHLDQF------KLYLSANY---- 156
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES-- 205
V + I K ++GY+ + +T F +I + ++++L G + E P ++
Sbjct: 157 MGVLDVEIANKESIWGYNQNVKTPFFRIFVDNSRNITRLRSSFERGEIQFENLFPSQNVS 216
Query: 206 --HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP--KLSHCQLEADVKAESIV 258
+I Y+L+ +D + GMS I + E P K S CQ+E V ++
Sbjct: 217 YDNINYLLRLMVDCKITGMSWITLPKGTY----EMCQPHLKSSRCQIECSVDYRQLI 269
>gi|21064771|gb|AAM29615.1| RH61467p [Drosophila melanogaster]
Length = 827
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSIF-RMRAILLGQEPHLLMDPDVYSMQDL 356
++ +Y ++L + L L+ +K ++ C R ++ H+ DPD++SM D
Sbjct: 677 LNSQLYKHKELAKARKRRLQLQAVKGFIANCRFATREQSFFNAIPAHITQDPDMWSMCDF 736
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K++++ HV+NC
Sbjct: 737 VDVQNTSMNRSIKEVIALSEQHVHNC 762
>gi|24640649|ref|NP_572496.1| CG12772, isoform A [Drosophila melanogaster]
gi|442615552|ref|NP_001259348.1| CG12772, isoform B [Drosophila melanogaster]
gi|22831967|gb|AAF46401.2| CG12772, isoform A [Drosophila melanogaster]
gi|440216551|gb|AGB95191.1| CG12772, isoform B [Drosophila melanogaster]
Length = 827
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSIF-RMRAILLGQEPHLLMDPDVYSMQDL 356
++ +Y ++L + L L+ +K ++ C R ++ H+ DPD++SM D
Sbjct: 677 LNSQLYKHKELAKARKRRLQLQAVKGFIANCRFATREQSFFNAIPAHITQDPDMWSMCDF 736
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K++++ HV+NC
Sbjct: 737 VDVQNTSMNRSIKEVIALSEQHVHNC 762
>gi|320586772|gb|EFW99435.1| DNA polymerase delta catalytic subunit [Grosmannia clavigera
kw1407]
Length = 1105
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+++FG G + V YLY+ P P + Q A ++ L +
Sbjct: 124 TVKLFGVTERGNSVVLHVTDFRHYLYVAAPSSFVP---SDCQAFRAYLETQLAMHQNAIH 180
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLN-GAVFNERFQPYE 204
SVQ SI G+ + + FLKI + +P H+S++ L+ A + + E
Sbjct: 181 SVQMTMRESIL------GFQNNTQNPFLKITVTDPKHISRVRSLIEGRKANWKGLWGQSE 234
Query: 205 SHI------PYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+ I Y+++F +D +++GMS +E K++ E + S+CQ+EA+V
Sbjct: 235 NQIMTYDNLQYVMRFMVDSDIFGMSWVEAPAGKYQLVPEQH--RQSNCQIEAEV 286
>gi|195355146|ref|XP_002044054.1| GM21745 [Drosophila sechellia]
gi|194129307|gb|EDW51350.1| GM21745 [Drosophila sechellia]
Length = 821
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDL 356
++ +Y ++L + L L+ +K ++ C P H+ DPD++SM D
Sbjct: 671 LNSQLYKHKELAKARKRRLQLQAVKGFIANCRFATREQSFFNAIPAHITQDPDMWSMCDF 730
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K++++ HV+NC
Sbjct: 731 VDVQNTSMNRSIKEVIALSEQHVHNC 756
>gi|171693865|ref|XP_001911857.1| hypothetical protein [Podospora anserina S mat+]
gi|170946881|emb|CAP73685.1| unnamed protein product [Podospora anserina S mat+]
Length = 1108
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P +++FG G + V YLY+ + E L + L +
Sbjct: 126 PAVKLFGVTENGNSVLLHVKDFKHYLYVAAPVSFVVEDCL-----AFKAYLESQMSQNHQ 180
Query: 148 VQHVFH-ISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES 205
Q V H +S+ + +YG+ + + ++K+ + +P H++K+ ++ G + ++
Sbjct: 181 YQQVIHNVSLTMRENIYGFQGNVQNPYIKVTVTDPKHINKVRTMIERGEANWKGMWKHDG 240
Query: 206 ------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
I Y+L+F +D ++ GMS +E + + K S+CQ EA
Sbjct: 241 GIMTYDSIQYLLRFMVDCSIAGMSWVEAPAGAY---DLIHMNKQSNCQFEA 288
>gi|403213728|emb|CCK68230.1| hypothetical protein KNAG_0A05660 [Kazachstania naganishii CBS
8797]
Length = 1095
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE--TMLQQLAASIDKALNIALGYKD 146
V+R FG EG V G YLY+P ++ ++ L++ +++ +
Sbjct: 134 VVRFFGVTSEGHSVLCNVTGFKHYLYVPAPNDTDSKDPNKLKEFVNYLNETFD------- 186
Query: 147 SVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYE 204
V I I K ++GY D + F K+ + P ++K+ G + FN F
Sbjct: 187 --NSVDSIEITLKQSIWGYSGDAKIPFWKVYVTHPAVLNKIRAAFERGHLSFNSWFSNGT 244
Query: 205 S---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+ +I Y L+ +D ++ GMS I K++ E K+S QLE +
Sbjct: 245 TTYDNIAYPLRVMVDCSIVGMSWITLPKTKYKLIPENQ--KVSTAQLEVTI 293
>gi|156086780|ref|XP_001610797.1| DNA polymerase delta subunit [Babesia bovis T2Bo]
gi|154798050|gb|EDO07229.1| DNA polymerase delta subunit [Babesia bovis]
Length = 1065
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 86 KVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPIT--ETMLQQLAASIDKALNIALG 143
++P+IR++G E V VH Y Y+ +P+ + + L +K L
Sbjct: 77 ELPIIRLYGVTRESHSVLVNVHNFMSYFYV---EKPVNFKKEHIPLLIDFFNKHLMELPP 133
Query: 144 YKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF------ 196
+K + ++V I I + P+ Y + + +LK++ P +S L + +G
Sbjct: 134 FKKTCRYVIDIDIVQITPLMLYKPNAKCDYLKVITTLPRMVSSLRSFIESGISLPVLDGD 193
Query: 197 NERFQPY-----ESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLE 249
N P+ E++IPY+L+F +D + G I + ++ K SHC +E
Sbjct: 194 NSTRIPFPRQVCEANIPYVLRFLLDGEITGGCWIRLPKGTYSIVAD----KTSHCSIE 247
>gi|190344317|gb|EDK35969.2| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC
6260]
Length = 1075
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 21/177 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+ R FG EG V G Y YIP + + L Q + + +
Sbjct: 107 IARFFGVTAEGYSVLCNVTGFRHYFYIPVPRGFMQDRHLDQFKSYLSA----------NY 156
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES-- 205
V + I K ++GY+ + +T F +I + ++++L G + E P ++
Sbjct: 157 MGVLDVEIANKESIWGYNQNVKTPFFRIFVDNSRNITRLRSSFERGEIQFENLFPSQNVS 216
Query: 206 --HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP--KLSHCQLEADVKAESIV 258
+I Y+L+ +D + GMS I + E P K S CQ+E V ++
Sbjct: 217 YDNINYLLRLMVDCKITGMSWITLPKGTY----EMCQPHLKSSRCQIECSVDYRQLI 269
>gi|194890965|ref|XP_001977414.1| GG18265 [Drosophila erecta]
gi|190649063|gb|EDV46341.1| GG18265 [Drosophila erecta]
Length = 822
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQDL 356
++ +Y ++L + L L+ +K ++ C P H+ DPD++SM D
Sbjct: 672 LNSQLYKHKELAKARKRRLQLQAVKGFIANCRFATREQSFFNAIPVHITQDPDMWSMCDF 731
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K++++ HV+NC
Sbjct: 732 VDVQNTSMNRSIKEVIALSEQHVHNC 757
>gi|303275346|ref|XP_003056969.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461321|gb|EEH58614.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1067
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 25/186 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALN-------IA 141
++R+FG G CV VHG PY Y + E+ K LN
Sbjct: 79 MLRIFGVTAGGNSVCVHVHGFEPYFYA-----KVPESFRDDQCEGFRKNLNDLMQQQQRG 133
Query: 142 LGYKDSVQHVFHISICKKFPMYGYHADERT--FLKILLYEPYHMSKLEDLLLNGA----- 194
+ + +S+ + Y+ + RT F+KI P ++ +L
Sbjct: 134 GNNGGNGTFISAVSVVRDKQSLMYYQEGRTAMFVKITTTLPNMVATARGILEKQGLLVPG 193
Query: 195 --VFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
V F +ES++ Y L+F +D + G + +E + ++ S S CQ E DV
Sbjct: 194 LHVSALTFMTFESNVLYTLRFMVDRGIVGGNWLELPPGGYHLRAKKS----SMCQYECDV 249
Query: 253 KAESIV 258
++++
Sbjct: 250 AFDAVI 255
>gi|9628340|ref|NP_042931.1| DNA polymerase catalytic subunit [Human herpesvirus 6A]
gi|118883|sp|P28857.1|DPOL_HHV6U RecName: Full=DNA polymerase
gi|455196|gb|AAA74631.1| DNA polymerase [Human herpesvirus 6]
gi|854017|emb|CAA58372.1| U38, DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 58 FPYLYIPFHHEPITETIVHS--------ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGV 109
+ ++ + FH ET++ + + R+ VI VIR+FG +G+K CV V G
Sbjct: 77 YDHMRMKFHIYDAVETLMFTDSIENLPFQYRHFVIPSGTVIRMFGRTEDGEKICVNVFGQ 136
Query: 110 FPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADE 169
Y Y E + + L A+I+ N+ L + + F I K +YGY+A+
Sbjct: 137 EQYFYC----ECVDG---RSLKATIN---NLMLTGEVKMSCSFVIEPADKLSLYGYNANT 186
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNL--YGMSNIE 226
L + + +++S+ +L NE F YE + + +F +D +G N++
Sbjct: 187 VVNLFKVSFGNFYVSQRIGKILQ----NEGFVVYEIDVDVLTRFFVDNGFLSFGWYNVK 241
>gi|116199119|ref|XP_001225371.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178994|gb|EAQ86462.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1104
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ--QLAASIDKALNIALGYKD 146
+++FG G + V G YLY+ PI+ T + A ++ L I
Sbjct: 125 TVKLFGVTENGNSVLLHVKGFKHYLYVA---APISFTPEDCPKFKAYLETQLAI------ 175
Query: 147 SVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYE 204
S Q + +++ + +YG+ + + F+K+ + +P ++K+ L+ +G A + ++ +
Sbjct: 176 SHQAIDSVTLTMRENIYGFQGNVQNPFIKVTVTDPKLINKVRTLIESGNANWKGMWKSVD 235
Query: 205 S------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
+I Y+L+F +D ++ GM+ +E K+ + T S+CQ EA++ + ++
Sbjct: 236 GSIMTYDNIQYLLRFMVDCSIAGMAWVEAPAGKYIPMTNTQ----SNCQFEAEISYKDLI 291
>gi|153800232|gb|ABO40780.1| DNA polymerase [Apodemus flavicollis cytomegalovirus 3]
Length = 712
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 19/187 (10%)
Query: 77 SELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASI-D 135
S R+ ++ V+R+FG G C+ V G Y Y + + +L A + D
Sbjct: 76 SGYRHHIVPSGTVVRIFGRTEHGNSICIHVFGQKTYFYCEYESADKLRQKIVRLEAELPD 135
Query: 136 KALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAV 195
K +C K +YGY+ L ++ ++ M K + A+
Sbjct: 136 PKSRFTFVVK---------PVCDKVSIYGYNVRYIENLYLVSFDNATMCK----KIGTAL 182
Query: 196 FNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAE 255
+ + + YE ++ + + C+D L I R+ K+S+ LE D +
Sbjct: 183 YEQHCKVYELNVDVVTRLCVDKKLPSFGWITVKRFHVRTAG-----KISNADLEIDCEVT 237
Query: 256 SIVVDMA 262
+V D
Sbjct: 238 DLVPDAG 244
>gi|410084320|ref|XP_003959737.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
gi|372466329|emb|CCF60602.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
Length = 1132
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 71/182 (39%), Gaps = 14/182 (7%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
++R FG G V G YLY+P I Q K LN
Sbjct: 171 IVRFFGVTNTGHSVLCNVTGFKHYLYVP--QPSIDNANDPQQREEFVKYLNEMFD----- 223
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES- 205
V I + K ++GY D++ F K+ P ++KL G FN F +
Sbjct: 224 NAVDSIEVVPKQSIWGYSGDDKIPFWKVYATYPSIVNKLRTAFERGHLTFNSWFSNGTTT 283
Query: 206 --HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAA 263
+I Y L+ +D + GMS I K+ E ++S CQLE ++ + ++ A
Sbjct: 284 YDNIAYPLRLMVDCGIVGMSWITLPKNKYTIIPENK--RVSTCQLEVNINYKDLIAHPAE 341
Query: 264 ND 265
D
Sbjct: 342 GD 343
>gi|397619623|gb|EJK65337.1| hypothetical protein THAOC_13809 [Thalassiosira oceanica]
Length = 496
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 87 VPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYK- 145
VPVIR++G N G VF+HG PY Y T T + ++ AL AL K
Sbjct: 140 VPVIRLYGVNETGNSVAVFIHGFTPYGYFALPRG-CTFTNDGDDSGAVRHALEEALSAKL 198
Query: 146 --------------DSVQHVFHIS-ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLL 190
Q V +S + K + GY FLK+ + P + KL+ ++
Sbjct: 199 GNQFGGGGGRGGDDGKQQAVLGVSYVEDKSSIMGYDPSHTRFLKVYVAMPTMIPKLKTIM 258
Query: 191 LNG 193
NG
Sbjct: 259 ENG 261
>gi|255716712|ref|XP_002554637.1| KLTH0F09966p [Lachancea thermotolerans]
gi|238936020|emb|CAR24200.1| KLTH0F09966p [Lachancea thermotolerans CBS 6340]
Length = 1095
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 28/188 (14%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGY 144
V+R FG +G V G YLY+P F + I L+ L +S D ++
Sbjct: 136 VVRFFGVTDQGHSVLCSVTGFRHYLYVPAPAGFTQQDI-HGFLEYLNSSYDNTVD----- 189
Query: 145 KDSVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG------AVFN 197
I I + ++GY + FLKI P ++KL G + F+
Sbjct: 190 --------EIEITARQSIWGYSGTAKLPFLKIYTNNPNAINKLRTGFERGHINYNDSWFS 241
Query: 198 ERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESI 257
Y+ +I Y L+ ID + GMS I K+ K+S CQLE + + +
Sbjct: 242 GGTTSYD-NIAYPLRLMIDCGITGMSWITLPEGKYSMTPPNQ--KVSTCQLEVRINFKDL 298
Query: 258 VVDMAAND 265
+ A +
Sbjct: 299 IARPAEGE 306
>gi|260814075|ref|XP_002601741.1| hypothetical protein BRAFLDRAFT_279186 [Branchiostoma floridae]
gi|229287043|gb|EEN57753.1| hypothetical protein BRAFLDRAFT_279186 [Branchiostoma floridae]
Length = 202
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 333 MRAILLGQE---------PHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNCE 383
+R LGQ HL DP V+S+ DLL VK+G L LKD V +HV CE
Sbjct: 67 LRTCRLGQNLYSEFKKLPDHLTHDPHVFSISDLLQVKNGELIGPLKDFVEDAVTHVKQCE 126
Query: 384 PTNA 387
A
Sbjct: 127 LCQA 130
>gi|302663472|ref|XP_003023378.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
gi|291187372|gb|EFE42760.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
Length = 1111
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLYI P+ T Q L L + V
Sbjct: 130 AVKLFGVTENGNSVLLHVTGFMHYLYIA---APVAFT--QADCVPFKAYLENQLSVTEPV 184
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P ++ + +++GA + ++ E
Sbjct: 185 IHSVQMTM--RENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGVEGE 242
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQLEADV 252
+I Y+L+F ID + GMS +E K+ LP S+CQ+EA V
Sbjct: 243 ILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYE-----VLPPGQCQSNCQIEASV 292
>gi|302497097|ref|XP_003010549.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae
CBS 112371]
gi|291174092|gb|EFE29909.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae
CBS 112371]
Length = 1111
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLYI P+ T Q L L + V
Sbjct: 130 AVKLFGVTENGNSVLLHVTGFMHYLYIA---APVAFT--QADCVPFKAYLENQLSVTEPV 184
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P ++ + +++GA + ++ E
Sbjct: 185 IHSVQMTM--RENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGE 242
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQLEADV 252
+I Y+L+F ID + GMS +E K+ LP S+CQ+EA V
Sbjct: 243 ILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYE-----VLPPGQCQSNCQIEASV 292
>gi|326480238|gb|EGE04248.1| DNA polymerase delta catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1111
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLYI P+ T Q L L + V
Sbjct: 130 AVKLFGVTENGNSVLLHVTGFMHYLYIA---APVAFT--QADCVPFKAYLENQLSVTEPV 184
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P ++ + +++GA + ++ E
Sbjct: 185 IHSVQMTM--RENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGE 242
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQLEADV 252
+I Y+L+F ID + GMS +E K+ LP S+CQ+EA V
Sbjct: 243 ILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYE-----VLPPGQCQSNCQIEASV 292
>gi|4996026|dbj|BAA78259.1| DNA polymerase [Human herpesvirus 6B]
Length = 1012
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VIR+FG + +G+K CV V G Y Y E + + L A+I+
Sbjct: 105 QYRHFVIPSGTVIRMFGRSEDGEKICVNVFGQEQYFYC----ECVDG---KSLKATIN-- 155
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
N+ L + + F I K +YGY+A+ L + + +++S+ +L N
Sbjct: 156 -NLMLTGEVKMSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQ----N 210
Query: 198 ERFQPYESHIPYILQFCIDYNL--YGMSNIE 226
E F YE + + +F +D +G N++
Sbjct: 211 EGFVVYEIDVDVLTRFFVDNGFLSFGWYNVK 241
>gi|327409888|ref|YP_004347308.1| DNA polymerase delta catalytic subunit [Lausannevirus]
gi|326785062|gb|AEA07196.1| DNA polymerase delta catalytic subunit [Lausannevirus]
Length = 1129
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 21/108 (19%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V +G + GK C + G PYLYI + K N++ G +++
Sbjct: 23 VFYAYGRDEAGKSVCTRIEGFRPYLYI-----------------QLPKKRNLSWGKREAR 65
Query: 149 QHVFHIS--ICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGA 194
H++ +CKKFP Y ++ FLK + P +LE L + GA
Sbjct: 66 TLFEHLTTRVCKKFPPVSYELKKKYFLKGKV--PVSTLRLEFLNIAGA 111
>gi|9633109|ref|NP_050219.1| DNA polymerase [Human herpesvirus 6B]
gi|82063853|sp|Q9QJ32.1|DPOL_HHV6Z RecName: Full=DNA polymerase catalytic subunit
gi|11261521|pir||T44185 probable DNA-directed DNA polymerase (EC 2.7.7.7) U38 [similarity]
- human herpesvirus 6 (strain Z29)
gi|5733549|gb|AAD49652.1|AF157706_49 U38 [Human herpesvirus 6B]
Length = 1012
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VIR+FG + +G+K CV V G Y Y E + + L A+I+
Sbjct: 105 QYRHFVIPSGTVIRMFGRSEDGEKICVNVFGQEQYFYC----ECVDG---KSLKATIN-- 155
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
N+ L + + F I K +YGY+A+ L + + +++S+ +L N
Sbjct: 156 -NLMLTGEVKMSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQ----N 210
Query: 198 ERFQPYESHIPYILQFCIDYNL--YGMSNIE 226
E F YE + + +F +D +G N++
Sbjct: 211 EGFVVYEIDVDVLTRFFVDNGFLSFGWYNVK 241
>gi|297831824|ref|XP_002883794.1| hypothetical protein ARALYDRAFT_899561 [Arabidopsis lyrata subsp.
lyrata]
gi|297329634|gb|EFH60053.1| hypothetical protein ARALYDRAFT_899561 [Arabidopsis lyrata subsp.
lyrata]
Length = 125
Score = 42.7 bits (99), Expect = 0.33, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 149 QHVFHISIC-KKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN----ERFQPY 203
+ V HI + +K MY + FLKI+L P S +L G + + FQ Y
Sbjct: 12 KFVHHIELVQRKSIMYYQQQKSQNFLKIVLTLPTMESTCLGILHRGIQISGLGMKSFQTY 71
Query: 204 ESHIPYILQFCIDYNLYG 221
ESH+P+ L+F ID N+ G
Sbjct: 72 ESHVPFDLRFMIDCNIVG 89
>gi|326473539|gb|EGD97548.1| DNA polymerase family B [Trichophyton tonsurans CBS 112818]
Length = 1085
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLYI P+ T Q L L + V
Sbjct: 130 AVKLFGVTENGNSVLLHVTGFMHYLYIA---APVAFT--QADCVPFKAYLENQLSVTEPV 184
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P ++ + +++GA + ++ E
Sbjct: 185 IHSVQMTM--RENLYEFQGNQQSPYLKITVTSPKAINTVRSTIMSGAANYKGMWKGIEGE 242
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK---LSHCQLEADV 252
+I Y+L+F ID + GMS +E K+ LP S+CQ+EA V
Sbjct: 243 ILTFDNIQYLLRFMIDTGISGMSWVEVPAAKYE-----VLPPGQCQSNCQIEASV 292
>gi|160420028|dbj|BAF93477.1| DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VIR+FG + +G+K CV V G Y Y E + + L A+I+
Sbjct: 105 QYRHFVIPSGTVIRMFGRSEDGEKICVNVFGQEQYFYC----ECVDG---KSLKATIN-- 155
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
N+ L + + F I K +YGY+A+ L + + +++S+ +L N
Sbjct: 156 -NLMLTGEVKMSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQ----N 210
Query: 198 ERFQPYESHIPYILQFCIDYNL--YGMSNIE 226
E F YE + + +F +D +G N++
Sbjct: 211 EGFVVYEIDVDVLTRFFVDNGFLSFGWYNVK 241
>gi|160420026|dbj|BAF93476.1| DNA polymerase [Human herpesvirus 6]
Length = 1012
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VIR+FG + +G+K CV V G Y Y E + + L A+I+
Sbjct: 105 QYRHFVIPSGTVIRMFGRSEDGEKICVNVFGQEQYFYC----ECVDG---KSLKATIN-- 155
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
N+ L + + F I K +YGY+A+ L + + +++S+ +L N
Sbjct: 156 -NLMLTGEVKMSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQ----N 210
Query: 198 ERFQPYESHIPYILQFCIDYNL--YGMSNIE 226
E F YE + + +F +D +G N++
Sbjct: 211 EGFVVYEIDVDVLTRFFVDNGFLSFGWYNVK 241
>gi|291229540|ref|XP_002734731.1| PREDICTED: mKIAA0226 protein-like [Saccoglossus kowalevskii]
Length = 1006
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 303 VYSMQDLLDVKSGALYLKLKDLVSACSIFRMRAILLGQEPH-LLMDPDVYSMQDLLDVKS 361
V S++ + + ++ YLK D + C + + PH L+ D ++YS+ DLL V+S
Sbjct: 858 VRSLEAVREYRTQLYYLK--DFLRTCRQGQSMWNEFDKRPHHLIHDVNIYSIIDLLKVRS 915
Query: 362 GALYLKLKDLVSACSSHVYNCE 383
G + L+L++LV +HV C+
Sbjct: 916 GEMPLELRELVEDAITHVTQCQ 937
>gi|340959854|gb|EGS21035.1| DNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1108
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 115/273 (42%), Gaps = 44/273 (16%)
Query: 14 SKPIAHFDPVHSELRNLVIQ-------KVPVIRVFGNNIEG------KKTCVFVHGVFPY 60
S P A F + ++ + + V+ +I G +K V+ P
Sbjct: 41 SSPTARFSSSQTNIKGKLASSQHKSTFETEVLERMSQDINGLKESNAEKDQVWDRPPVPK 100
Query: 61 LYIPFHHEPITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYI----P 116
+ P H +T + +E +L + +++FG +G + V YLY+
Sbjct: 101 DWDPEKHS-LTFQAIEAEEGSLAGGQA-TVKLFGVTDKGNSVLLHVRDFKHYLYVQAPVS 158
Query: 117 FHHE--PITETMLQQLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHAD-ERTFL 173
F H+ P+ + L++ +G V H +++ + +YG+ + + +L
Sbjct: 159 FTHDDCPLFQAYLEK-----------QMGMTQPVIH--SVTLTMRENIYGFQGNVQNPYL 205
Query: 174 KILLYEPYHMSKLEDLLLNG-AVFNERFQPYES------HIPYILQFCIDYNLYGMSNIE 226
KI + +P ++K+ ++ G A + ++ + +I Y+L+F +D +L GM+ +E
Sbjct: 206 KITVTDPKFINKVRTMIERGEANWKGMWKSSDGTIMTYDNIQYLLRFMVDTSLAGMAWVE 265
Query: 227 FNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
K+ T K S+CQ+EA + ++
Sbjct: 266 APAGKY--TVMTGNEKQSNCQIEAQMSYRDMIA 296
>gi|167390088|ref|XP_001739203.1| DNA polymerase zeta catalytic subunit [Entamoeba dispar SAW760]
gi|165897180|gb|EDR24417.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1384
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH------HEPITETMLQQLAASIDKALNIALGYKD 146
FG+ +G C+ G P+L I +EPI + + L +I++ +N +
Sbjct: 31 FGHQEDGNTCCIIFCGWRPHLDIDLTELNKRINEPIGDVFID-LVETINEVINEQRHKEK 89
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER-FQPYES 205
+ + H+ + + P GYH + F +I L ++K+ + NE YE+
Sbjct: 90 QYRIIDHLEVIEGIPFVGYHTRKHIFGRIWLKNHKDINKVRKIC------NEMDIHIYEA 143
Query: 206 HIPYILQFCIDYNLYGMSNIEFN 228
H+ + F D L M+ + FN
Sbjct: 144 HLSPDIMFMTDLGLRTMTFVHFN 166
>gi|315042333|ref|XP_003170543.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345577|gb|EFR04780.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1112
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLYI P+ T Q L L + V
Sbjct: 131 AVKLFGVTENGHSVLLHVTGFMHYLYIA---APVAFT--QADCVPFKAYLENQLSVTEPV 185
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P + + +++GA + ++ E
Sbjct: 186 IHSVQMTM--RENLYEFQGNQQSPYLKITVTNPKAIITVRSTIMSGAANYKGMWKGVEGE 243
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKL---SHCQLEADV 252
+I Y+L+F ID + GMS +E K+ T LP S+CQ+EA V
Sbjct: 244 ILTFDNIQYLLRFMIDTGISGMSWVEVPAAKY-----TVLPPGKCHSNCQIEASV 293
>gi|389568573|gb|AFK85010.1| DNA polymerase [Rhinolophus ferrumequinum herpesvirus 1]
Length = 1014
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VI++FG G K CV V G Y Y + + + I
Sbjct: 104 QFRHYVIPSGTVIKLFGKTESGAKCCVNVFGQHQYFYCECDD---VKNLYSVINRHITSN 160
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADE-RTFLKILLYEPYHMSKLEDLLLNGAVF 196
I +G S++ K+ +YGY+ D +K+ Y K+ LLL
Sbjct: 161 AEIKMGSSYSIESA------TKYSIYGYNTDPVPDLVKVSFANHYVAKKVAKLLLADG-- 212
Query: 197 NERFQPYESHIPYILQFCID--YNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEAD 251
++ YE+ + +++F ID + +G ++ N V+ + K S+ +LE D
Sbjct: 213 ---YKMYETDVDILMRFFIDNEFPSFGWYRLQRNHVREHN-------KTSNVELEID 259
>gi|308504541|ref|XP_003114454.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
gi|308261839|gb|EFP05792.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
Length = 1080
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 34/232 (14%)
Query: 90 IRVFGNNVEGKKTCVFVHGVFPYLYIP------FHHEPITETMLQQLAASIDKALNIALG 143
++++G G CV V FP+ Y H +T + + AS +
Sbjct: 86 VKLYGVTKAGNSICVIVTDYFPHFYFQAPQGFGVEHIQTAQTAICNMVASAKRRGGSGQN 145
Query: 144 Y--KDSVQHVFHISICKKFPMYGYH-ADERT-FLKIL-LYEPYHMSKLE-----DLLLNG 193
V ++ HI + + +Y + AD + F+K+ E H +++E +L+ G
Sbjct: 146 QLPGKVVDNLVHIELVRGENLYYFRGADTKVPFVKVTGSTEALHKARMELRNGINLMGKG 205
Query: 194 AVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFR--SDSETSLPKLSHCQLEAD 251
V YES+I I++F N+ G IE K + S+SE S S CQ+E
Sbjct: 206 PVNVGNL--YESNINDIVKFMAKTNIVGCGWIELPAGKCQILSNSEKS----SRCQIEVS 259
Query: 252 VKAESIVVDMAAND-SDVATSGGITRYLS-DVLLNSMRAILLGQEPHLLMDP 301
V ++++V + + +D+A R LS D+ R + P + DP
Sbjct: 260 VNVKNLIVHESEGEWADIAP----IRTLSLDIECIGRRGVF----PEAIKDP 303
>gi|340522830|gb|EGR53063.1| DNA polymerase delta, catalytic subunit [Trichoderma reesei QM6a]
Length = 1105
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+++FG EG + V YLY+ P +P D AL A
Sbjct: 124 AVKLFGVTDEGYSVMLHVTDFKHYLYVAAPMSFQPK------------DCALYKAYLETQ 171
Query: 147 SVQH---VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG-AVFNERFQ 201
QH + +S+ K +Y Y + + +LKI + +P ++ + + G A + +
Sbjct: 172 VAQHQPAIHSVSLTMKEDIYHYQGNVQSPYLKITVTDPKFINTVRSTIEKGLANWKGMWG 231
Query: 202 PYES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
P + +I Y+L+F +D + GMS +E ++ E S K S+CQ+EA+V
Sbjct: 232 PLDGGLRTYDNIQYVLRFMVDCKIQGMSWVEAPAGTYKMIPEHS--KQSNCQIEAEV 286
>gi|451998244|gb|EMD90709.1| hypothetical protein COCHEDRAFT_1179801 [Cochliobolus
heterostrophus C5]
Length = 1115
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 77 SEL-RNLVIQKV-----------PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITE 124
SEL NLV Q++ +++FG G + V G Y Y+ P+
Sbjct: 99 SELTNNLVFQQIEAEEGVLHGGKTTVKLFGVTETGHSVLLHVTGFQHYFYVA---APVN- 154
Query: 125 TMLQQLAASIDKALNIALGYKDSVQH---VFHISICKKFPMYGYHADERT-FLKILLYEP 180
QQ K A K QH + + +C + + + ++++ +LKI + +P
Sbjct: 155 --FQQADCEPYKIFLEAECQKSFNQHSAVIASVKMCMRENILRFQGNQKSPYLKITVTDP 212
Query: 181 YHMSKLEDLLLNGAVFNERFQPYES-------HIPYILQFCIDYNLYGMSNIEFNMVKFR 233
++++ ++ G +R P +I Y+L+F ID + GM +E K++
Sbjct: 213 KLINRVRMMVQKGNANYKRLWPAREDGILTFDNIAYVLRFMIDTKVTGMCWVEAPAAKWK 272
Query: 234 SDSETSLPKLSHCQLEADVKAESIVVDMAAND 265
+ + + S+CQ+E V E ++ A +
Sbjct: 273 MIN--ARDRHSNCQIEGQVHYEDLIAHQAEGE 302
>gi|194767229|ref|XP_001965721.1| GF22302 [Drosophila ananassae]
gi|190619712|gb|EDV35236.1| GF22302 [Drosophila ananassae]
Length = 829
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 299 MDPDVYSMQDLLDVKSGALYLK-LKDLVSACSI-FRMRAILLGQEPHLLMDPDVYSMQDL 356
++ +Y ++L + + L+ +K +S C R +A H+ DPD++SM D
Sbjct: 680 LNEQLYKQKELAKARRRRVQLQAVKGFISNCRFAVREQAFFNAIPEHITQDPDMWSMCDF 739
Query: 357 LDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K+LV HV +C
Sbjct: 740 VDVQNKSMGRSIKELVVLSEHHVQSC 765
>gi|449301894|gb|EMC97903.1| hypothetical protein BAUCODRAFT_31911 [Baudoinia compniacensis UAMH
10762]
Length = 1107
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 41/182 (22%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI------------PFHHEPITETMLQQLAASIDK 136
+++FG G + V YLY+ PF + ET + Q AA+I
Sbjct: 127 TVKLFGVTETGHSVLLHVTDFLHYLYVAAPVSFTKSDCEPF--KTYLETHMGQHAAAIH- 183
Query: 137 ALNIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-A 194
SVQ V + ++G+ ++++ +LKI + + H++KL + G A
Sbjct: 184 ----------SVQMVLREN------LFGFQGNQKSPYLKITVTDHKHINKLRTTIERGDA 227
Query: 195 VFNERFQPYES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQL 248
+ ++ E +I Y+L+F ID + GMS + + K+ S + K SHCQ+
Sbjct: 228 NYKGLWKAAEGGILTFDNIQYVLRFMIDTKVSGMSWVSVDPGKYHLISPQT--KHSHCQI 285
Query: 249 EA 250
EA
Sbjct: 286 EA 287
>gi|407927598|gb|EKG20487.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1097
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLY+ T+ Q A ++ +
Sbjct: 117 TVKLFGVTDNGHSVLLHVTGFMHYLYVAAPM-AFTQADCQPFKAYLETQI---------A 166
Query: 149 QH---VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPY 203
QH + + + + +YG+ ++++ +LKI + +P +++L + +G A + ++
Sbjct: 167 QHQPAIHSVQMTMRENIYGFQGNQKSPYLKIAVTDPKFINRLRTTIESGNANYKGLWKSA 226
Query: 204 ESHI------PYILQFCIDYNLYGMSNIE-----FNMVKFRSDSETSLPKLSHCQLEADV 252
E I Y+L+F +D + GMS +E ++M++ R + S CQ+EA V
Sbjct: 227 EGSILTFDNLQYVLRFMVDCKIAGMSWVEAKAGKYHMIQHRD-------RHSTCQIEAHV 279
Query: 253 KAESIVVDMA 262
++ A
Sbjct: 280 HYRDLIAHQA 289
>gi|260946881|ref|XP_002617738.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
gi|238849592|gb|EEQ39056.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
Length = 655
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 33/221 (14%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQH 150
R FG EG V G Y Y+P + ++ L + + + K++
Sbjct: 155 RFFGVTEEGHSVLCNVTGFLHYFYVPVPKGFMRDSHLARFTSHM----------KENYYG 204
Query: 151 VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYES---- 205
+ I I K ++G++ + +T F K+++ ++K+ G + E F P +
Sbjct: 205 IHDIEIVLKESIWGFNNNMKTPFFKVVVKNAREITKIRGAFERGEISFENFFPQNNVTYD 264
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDMAAND 265
+I Y+L+ ID + GMS I +LPK ++ + ++K + V+ + +
Sbjct: 265 NINYLLRMMIDCKITGMSWI-------------TLPKGAYTLVAPELKVSTCQVECSIDY 311
Query: 266 SDVATSGGITRYLSDVLLNSMR-----AILLGQEPHLLMDP 301
D+ + +L L M A G P +DP
Sbjct: 312 KDLVSHAPEGEWLKMAPLRIMSFDIECAGRKGVFPEAQLDP 352
>gi|403509122|ref|YP_006640760.1| condensation domain protein [Nocardiopsis alba ATCC BAA-2165]
gi|402798450|gb|AFR05860.1| condensation domain protein [Nocardiopsis alba ATCC BAA-2165]
Length = 645
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 294 EPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSIFRMRAILLGQEPHLLMDPDV-YS 352
E +L + + Y ++ +D SGAL + +V C I RMR ++ P +DPD+ Y
Sbjct: 27 ESPMLNNGEYYELRGAID--SGALESAVNTMVEECEILRMRFLVTESGPRQRLDPDLTYP 84
Query: 353 MQ--DLLDV---KSGALYLKLKDLVS 373
M+ DL DV ++ AL + KDL +
Sbjct: 85 MRTVDLTDVEDPRAAALEIMRKDLAT 110
>gi|195403111|ref|XP_002060138.1| GJ18512 [Drosophila virilis]
gi|194140982|gb|EDW57408.1| GJ18512 [Drosophila virilis]
Length = 884
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 321 LKDLVSACSI-FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
++D ++AC R +A+ H+ DPD++SM D +DV++ ++ +++L++ HV
Sbjct: 759 VRDFIAACRFATREQALFDAVPAHITNDPDMWSMCDFVDVQNNSMCRSIEELIALNEQHV 818
Query: 380 YNC 382
+ C
Sbjct: 819 HGC 821
>gi|435849896|ref|YP_007301837.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433663384|gb|AGB50809.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 924
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDS 147
P+IR++G + GK C V G PY + A D + D+
Sbjct: 22 PIIRIYGKDDAGKSICCLVPGFEPYFF-----------------AQADNPAELCNYLTDA 64
Query: 148 VQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHI 207
+ I +KF GY + +KI + P + + D + + NE F E+ +
Sbjct: 65 FDCIQKADIVEKFLPIGYQTKKVPIVKITVTLPTDVRDIRDQIRDLPGVNEIF---EADV 121
Query: 208 PYILQFCIDYNLYGMSNI 225
+ +F ID NL+ + I
Sbjct: 122 LFHNRFLIDKNLHPLKWI 139
>gi|189207907|ref|XP_001940287.1| DNA polymerase delta catalytic subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976380|gb|EDU43006.1| DNA polymerase delta catalytic subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1115
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLY----IPFHHEPITETMLQQLAASIDKALNIALGY 144
+++FG G + V G Y Y I FH E L L K N
Sbjct: 123 TVKLFGVTENGHSVLLHVTGFQHYFYVAAPIDFHKEDCEGYKLF-LEGECQKNFNQHSAV 181
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPY 203
SVQ +C + + + ++++ +LKI + +P ++++ ++ G +R P
Sbjct: 182 IASVQ------MCMRENILRFQGNQKSPYLKITVCDPKMINRVRMMVQKGNANYKRLWPA 235
Query: 204 ES-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+I Y+L+F ID ++ GM +E K+R + + S+CQ EA V +
Sbjct: 236 REDGILTFDNIAYVLRFMIDTSVTGMCWVEAPASKYRMINPRE--RHSNCQFEAQVHYKD 293
Query: 257 IVV 259
++
Sbjct: 294 LIA 296
>gi|449707197|gb|EMD46897.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1385
Score = 41.6 bits (96), Expect = 0.65, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH------HEPITETMLQQLAASIDKALNIALGYKD 146
FG+ +G C+ +G P+L I +EPI + + L +I++ +N +
Sbjct: 31 FGHQEDGNTCCIIFYGWKPHLDIDLTELNKKINEPIGDVFID-LVETINEVINEQKPKEK 89
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER-FQPYES 205
+ + H+ + + P GYH + TF ++ L ++++ + NE YE+
Sbjct: 90 QYRIIDHLEVIEGIPFVGYHTRKHTFGRVWLKNHKDINQVRKIC------NEMDINIYEA 143
Query: 206 HIPYILQFCIDYNLYGMSNIEFN 228
H+ + F D L M + FN
Sbjct: 144 HLSPDIIFMTDLGLRTMIFVHFN 166
>gi|67482945|ref|XP_656768.1| DNA polymerase zeta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473989|gb|EAL51383.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1385
Score = 41.6 bits (96), Expect = 0.67, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH------HEPITETMLQQLAASIDKALNIALGYKD 146
FG+ +G C+ +G P+L I +EPI + + L +I++ +N +
Sbjct: 31 FGHQEDGNTCCIIFYGWKPHLDIDLTELNKKINEPIGDVFID-LVETINEVINEQKPKEK 89
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNER-FQPYES 205
+ + H+ + + P GYH + TF ++ L ++++ + NE YE+
Sbjct: 90 QYRIIDHLEVIEGIPFVGYHTRKHTFGRVWLKNHKDINQVRKIC------NEMDINIYEA 143
Query: 206 HIPYILQFCIDYNLYGMSNIEFN 228
H+ + F D L M + FN
Sbjct: 144 HLSPDIIFMTDLGLRTMIFVHFN 166
>gi|158300990|ref|XP_001689289.1| AGAP011731-PA [Anopheles gambiae str. PEST]
gi|157013425|gb|EDO63355.1| AGAP011731-PA [Anopheles gambiae str. PEST]
Length = 133
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 7 VTIDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYL 61
+ ID ++ +P+A + + VPV+R+FG +EG C VHG PYL
Sbjct: 86 IDIDNYIGQPMAG-------MPGAQVGPVPVMRMFGVTMEGNSVCAHVHGFLPYL 133
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 84 IQKVPVIRVFGNNVEGKKTCVFVHGVFPYL 113
+ VPV+R+FG +EG C VHG PYL
Sbjct: 104 VGPVPVMRMFGVTMEGNSVCAHVHGFLPYL 133
>gi|358401350|gb|EHK50656.1| hypothetical protein TRIATDRAFT_53190 [Trichoderma atroviride IMI
206040]
Length = 1103
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYI--PFHHEPITETMLQQLAASIDKALNIALGYKD 146
+++FG +EG + V YLY+ P +P D AL A
Sbjct: 122 TVKLFGVTMEGHSVMLHVTDFKHYLYVAAPMSFQPK------------DCALFKAYLETQ 169
Query: 147 SVQH---VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG--------A 194
QH + +S+ + +Y Y + + +LKI + +P ++ + + G
Sbjct: 170 VAQHQPAIHSVSLAMREDIYHYQGNVQSPYLKITVTDPKFINSVRSTIEKGFANWKGMWG 229
Query: 195 VFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
V + + Y+ +I Y+L+F +D + GMS +E + E S K S+CQ+EA++
Sbjct: 230 VLDGGLRTYD-NIQYVLRFMVDCKIQGMSWVEAPASSYSLIPEHS--KQSNCQIEAEI 284
>gi|308493299|ref|XP_003108839.1| hypothetical protein CRE_11841 [Caenorhabditis remanei]
gi|308247396|gb|EFO91348.1| hypothetical protein CRE_11841 [Caenorhabditis remanei]
Length = 524
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L D D+YS DL+DVKSG+L +LK+L+ +HV C
Sbjct: 400 FRRR---LWPKEYLRSDIDLYSFADLMDVKSGSLQRRLKNLLKHSMNHVMAC 448
>gi|346974556|gb|EGY18008.1| DNA polymerase delta catalytic subunit [Verticillium dahliae
VdLs.17]
Length = 1104
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 149 QHVFH-ISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES 205
Q V H +++ + +YG+ + + +LKI + +P H+ K+ + G A + ++ +
Sbjct: 175 QPVIHSVALLMRENIYGFQGNVKNPYLKITVNDPKHIGKVRSTIEAGNANWKGLWKGVDG 234
Query: 206 ------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+I Y+L+F +D L GMS +E ++ S +SL + S+CQ+EA++
Sbjct: 235 GVMTFDNIQYVLRFMVDCKLQGMSWVEAPAKSYKVMS-SSL-RQSNCQIEAEI 285
>gi|68478001|ref|XP_717004.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
gi|68478136|ref|XP_716937.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438626|gb|EAK97954.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438697|gb|EAK98024.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
Length = 678
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGYKDS 147
R FG EG V G Y Y P E +TE L A+ D + + K+S
Sbjct: 80 RFFGITQEGHSVLCNVTGFIHYFYCPVPKGFEENLTE-FTNYLKATFDGIERVEITSKES 138
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
+ +GY + +T F KI + ++SK+ NG V N +
Sbjct: 139 I--------------WGYSNNIKTSFFKI--FAKNNISKIRSAFQNGQVHNIDPCITYDN 182
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
I Y+L+ ID + GMS I K++ + K+S CQ+E + ++
Sbjct: 183 INYLLRLMIDCKITGMSWITLPRDKYKIVNN----KISTCQIECSIDYRDLI 230
>gi|296816038|ref|XP_002848356.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS
113480]
gi|238841381|gb|EEQ31043.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS
113480]
Length = 1113
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG G + V G YLY+ P+ T Q A L L + V
Sbjct: 132 AVKLFGVTESGHSVLLHVTGFMHYLYVA---APVAFT--QADCAPFRAYLEDQLAITEPV 186
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES- 205
H +++ + +Y + ++++ +LKI + P + + +++G A + ++ E
Sbjct: 187 IHSVQMTM--RENLYEFQGNQQSPYLKITVTNPKSIVTVRSTIMSGSANYKGMWKGIEGE 244
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADV 252
+I Y+L+F ID + GMS +E K+ LP + S+CQ+EA V
Sbjct: 245 ILTFDNIQYLLRFMIDTGISGMSWVEVPASKYE-----ILPPHQRHSNCQIEASV 294
>gi|330921129|ref|XP_003299297.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
gi|311327099|gb|EFQ92613.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLY----IPFHHEPITETMLQQLAASIDKALNIALGY 144
+++FG G + V G Y Y I F E E L K N
Sbjct: 123 TVKLFGVTENGHSVLLHVTGFQHYFYVAAPIDFRKEDC-EPYKTFLEGECQKNFNQHSAV 181
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPY 203
SVQ +C + + + ++++ +LKI + +P ++++ ++ G +R P
Sbjct: 182 IASVQ------MCMRENILRFQGNQKSPYLKITVCDPKMINRVRMMVQKGNANYKRLWPA 235
Query: 204 ES-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAES 256
+I Y+L+F ID ++ GM +E K+R + + S+CQ EA V E
Sbjct: 236 REDGILTFDNIAYVLRFMIDTSVTGMCWVEAPASKYRMINPRE--RHSNCQFEAQVHYED 293
Query: 257 IVV 259
++
Sbjct: 294 LIA 296
>gi|77022890|ref|XP_888889.1| hypothetical protein CaO19_5182 [Candida albicans SC5314]
gi|76573702|dbj|BAE44786.1| hypothetical protein [Candida albicans]
Length = 1038
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGYKDS 147
R FG EG V G Y Y P E +TE L A+ D + + K+S
Sbjct: 80 RFFGITQEGHSVLCNVTGFIHYFYCPVPKGFEENLTE-FTNYLKATFDGIERVEITSKES 138
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
+ +GY + +T F KI + ++SK+ NG V N +
Sbjct: 139 I--------------WGYSNNIKTSFFKI--FAKNNISKIRSAFQNGQVHNIDPCITYDN 182
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
I Y+L+ ID + GMS I K++ + K+S CQ+E + ++
Sbjct: 183 INYLLRLMIDCKITGMSWITLPRDKYKIVNN----KISTCQIECSIDYRDLI 230
>gi|13124716|sp|P46588.2|DPOD_CANAL RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|3850149|emb|CAA21949.1| DNA polymerase delta [Candida albicans]
Length = 1038
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGYKDS 147
R FG EG V G Y Y P E +TE L A+ D + + K+S
Sbjct: 80 RFFGITQEGHSVLCNVTGFIHYFYCPVPKGFEENLTE-FTNYLKATFDGIERVEITSKES 138
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
+ +GY + +T F KI + ++SK+ NG V N +
Sbjct: 139 I--------------WGYSNNIKTPFFKI--FAKNNISKIRSAFQNGQVHNIDPCITYDN 182
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
I Y+L+ ID + GMS I K++ + K+S CQ+E + ++
Sbjct: 183 INYLLRLMIDCKITGMSWITLPRDKYKIVNN----KISTCQIECSIDYRDLI 230
>gi|302421082|ref|XP_003008371.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261351517|gb|EEY13945.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1055
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 149 QHVFH-ISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES 205
Q V H +++ + +YG+ + + +LKI + +P H+ K+ + G A + ++ +
Sbjct: 126 QPVIHSVALLMRENIYGFQGNVKNPYLKITVNDPKHIGKVRSTIEAGNANWKGLWKGVDG 185
Query: 206 ------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+I Y+L+F +D L GMS +E ++ S +SL + S+CQ+EA++
Sbjct: 186 GVMTFDNIQYVLRFMVDCKLQGMSWVEAPAKSYKLMS-SSL-RQSNCQIEAEI 236
>gi|367016721|ref|XP_003682859.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
gi|359750522|emb|CCE93648.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
Length = 1094
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 20/185 (10%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHH--EPITETMLQQLAASIDKALNIALGYKD 146
++R FG +G V G YLY+P + E + L + + + A
Sbjct: 133 IVRFFGVTNDGHSILCNVTGFKHYLYVPAPNAGEALDPHQLDDFVKYLRENYDNA----- 187
Query: 147 SVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-----AVFNERF 200
V I + K ++GY D + F KI + P ++KL G + F
Sbjct: 188 ----VDKIELVPKQSIWGYSGDSKLPFYKIYVTHPNFVNKLRTAFEKGHLSYKSWFGTGT 243
Query: 201 QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
Y+ +I Y L+ ID + GMS I K++ E ++S CQ+E + +V
Sbjct: 244 TTYD-NIAYTLRLMIDCGIVGMSWITLPKNKYQLIPENE--RVSSCQIEVRINYRDLVAH 300
Query: 261 MAAND 265
A +
Sbjct: 301 PAEGE 305
>gi|154305265|ref|XP_001553035.1| hypothetical protein BC1G_08927 [Botryotinia fuckeliana B05.10]
Length = 846
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 154 ISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH------ 206
+S+ + +YG+ +++ ++KI + +P +++K+ + G + + +
Sbjct: 184 VSVVLRENLYGFTGNKQHAYIKITVTDPKYINKVRTTIEEGKANWKGMWRNDGNGILTFD 243
Query: 207 -IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
I Y+L+F +D +YGMS +E K+ E + + S+CQ+EA
Sbjct: 244 SIQYVLRFMVDVKIYGMSWVEVEAKKYEIVPEHN--RQSNCQIEA 286
>gi|50308039|ref|XP_454020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643155|emb|CAG99107.1| KLLA0E01607p [Kluyveromyces lactis]
Length = 1101
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIP----FHHEPITETMLQQLAASIDKALNIALGY 144
VIR FG +G V G YLY+P FH E I T+ Q L +
Sbjct: 136 VIRFFGVTDKGNSILCNVTGFKHYLYVPAPLGFHQENIL-TLQQYLNEHYE--------- 185
Query: 145 KDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVF-NERF-- 200
+V I I K ++G+ D + FL+I + P ++K+ G + N+++
Sbjct: 186 ----NNVDSIKIVPKQSIWGFSGDAKIPFLQIFVKNPNLLNKIRTGFEKGYIQPNDKWFV 241
Query: 201 ---QPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEADVKA 254
Y+ +I + L+ ID + GMS I K++ +P ++S CQ E ++
Sbjct: 242 GGCTTYD-NIAFPLRLMIDCGIVGMSWITLPASKYQ-----LVPVNQRISTCQFEVNINY 295
Query: 255 ESIVVDMAAND 265
+ ++ A +
Sbjct: 296 KDLIAHPAEGE 306
>gi|322703524|gb|EFY95132.1| DNA polymerase delta catalytic subunit [Metarhizium anisopliae
ARSEF 23]
Length = 1104
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 162 MYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-------FNERFQPYESHIPYILQF 213
+YG+ +E+ +LK+ + +P ++K+ + +G E + Y+ +I Y+L+F
Sbjct: 189 IYGFSGNEQHAYLKVTVTDPKFINKVRSTIESGNANWKGMWGVTEGIRTYD-NIQYVLRF 247
Query: 214 CIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+D + GM+ +E +++ E + S+CQ+EA+V
Sbjct: 248 MVDCKVQGMAWVEAPATRYKIVPENL--RQSNCQIEAEV 284
>gi|310792587|gb|EFQ28114.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1103
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 162 MYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES------HIPYILQF 213
+YG+ + ++ +LKI + +P +S++ + +G A + ++ + +I Y+L+F
Sbjct: 188 IYGFQGNVKSPYLKITVMDPKFISRVRTTIESGNANWKGMWKGMDGGVMTFDNIQYVLRF 247
Query: 214 CIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+D ++GMS +E K++ ++ + S+CQ+EA++
Sbjct: 248 MVDCKIFGMSWVEAPASKYQVLPQSQ--RQSNCQIEAEI 284
>gi|340369462|ref|XP_003383267.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Amphimedon queenslandica]
Length = 814
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 293 QEPHLLMDPD-----VYSMQDLLDVKSGALYLK-----LKDLVSACSIFRMRAILLGQEP 342
+EPH +D +Y ++ + D++ +++ ++ + C F L+G +
Sbjct: 648 KEPHFNLDISRLYYRIYELKKVKDLREQISFMRRYIFSCRETANLCERFTQFGHLVGSDV 707
Query: 343 HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
H +YSM+D ++VKSG L +LK L + H+ +C
Sbjct: 708 H------IYSMEDFVNVKSGQLSKQLKFLATETEKHIKSC 741
>gi|402085670|gb|EJT80568.1| DNA polymerase delta catalytic subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1104
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG +G + V YLY+ T ++ +S L +
Sbjct: 123 TVKLFGVTEQGNSVMLHVKDFKHYLYVA-----APSTFSKEDCSSFKTFLETGVAQHQPA 177
Query: 149 QHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES- 205
H +++ + MYG+ + + F+K+ + +P H++ + + +G A + ++ S
Sbjct: 178 IHSVQLTL--RENMYGFQNNTQNPFIKVTVTDPKHINTVRTTIESGRANWKGMWRNDGSG 235
Query: 206 -----HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
+I Y+L+F +D ++ GMS +E + + K S+CQ+EA++ +V
Sbjct: 236 IMTFDNIQYVLRFMVDCHIQGMSWVEAPAAAYSLIHASQ--KQSNCQIEAEISYRDLVAH 293
Query: 261 MAAND 265
D
Sbjct: 294 KPVGD 298
>gi|195163239|ref|XP_002022459.1| GL12951 [Drosophila persimilis]
gi|194104451|gb|EDW26494.1| GL12951 [Drosophila persimilis]
Length = 847
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 299 MDPDVYSM-QDLLDVKSGALYLK-LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQD 355
++ +YS +DL + + L+ +K+ + C P HL D D++SM D
Sbjct: 701 LNAQLYSKHKDLAKARRRRIQLQSVKEFIGNCRFATREQAFFNAIPLHLTQDTDMWSMCD 760
Query: 356 LLDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K+L+ HV+NC
Sbjct: 761 FVDVQNSSMSRSIKELILLSEQHVHNC 787
>gi|321466122|gb|EFX77119.1| hypothetical protein DAPPUDRAFT_54583 [Daphnia pulex]
Length = 319
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 340 QEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNCE 383
Q L DP++YS+ DL V SG L+ L+ +VS+ +H+ +CE
Sbjct: 266 QSADWLEDPEIYSLYDLTRVNSGELFQLLRQIVSSGMNHIIHCE 309
>gi|52551098|gb|AAU84534.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 1151
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 21/201 (10%)
Query: 70 ITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQ 129
+T + + S + VI + G+ +G++ V V+G Y YI E + M
Sbjct: 116 LTRSGLSSRFAAHLYPSATVITLMGSTADGRRVAVHVYGSNAYFYI--DKEEAEKRMEVS 173
Query: 130 LAASIDKALNIAL-------GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYH 182
A + K L L +++V F + + +Y Y + R F ++ H
Sbjct: 174 GAPELKKRLCALLQSSTRLTDQRNAVPEAFRVDTVDRQDIYYYDSRPRPFYRVHAKNHRH 233
Query: 183 MSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPK 242
+ L+DLL YE+ + + +F ID + F + R+
Sbjct: 234 VQSLKDLLP--------VTVYEARVDPVTRFLIDNENFS----SFGWYRLRTGHRARFRD 281
Query: 243 LSHCQLEADVKAESIVVDMAA 263
S AD++ + D+ A
Sbjct: 282 PSAAATSADIELDCTSDDLEA 302
>gi|347826749|emb|CCD42446.1| hypothetical protein [Botryotinia fuckeliana]
Length = 452
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 154 ISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH------ 206
+S+ + +YG+ +++ ++KI + +P +++K+ + G + + +
Sbjct: 45 VSVVLRENLYGFTGNKQHAYIKITVTDPKYINKVRTTIEEGKANWKGMWRNDGNGILTFD 104
Query: 207 -IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
I Y+L+F +D +YGMS +E K+ E + + S+CQ+EA
Sbjct: 105 SIQYVLRFMVDVKIYGMSWVEVEAKKYEIVPEHN--RQSNCQIEA 147
>gi|951001|emb|CAA61282.1| DNA-directed DNA polymerase III [Candida albicans]
Length = 1038
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGYKDS 147
R FG EG V G Y Y P E +TE L A+ D + + K+S
Sbjct: 80 RFFGITQEGHSVLCNVTGFIHYFYCPVPKGFEENLTE-FTNYLKATFDGIERVEITSKES 138
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
+ +GY + +T F KI + ++SK+ NG V N +
Sbjct: 139 I--------------WGYSNNIKTPFFKI--FAKNNISKIRSAFQNGQVPNIDPCITYDN 182
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
I Y+L+ ID + GMS I K++ + K+S CQ+E + ++
Sbjct: 183 INYLLRLMIDCKITGMSWITLPRDKYKIVNN----KISTCQIECSIDYRDLI 230
>gi|322693697|gb|EFY85548.1| DNA polymerase delta catalytic subunit [Metarhizium acridum CQMa
102]
Length = 1104
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 162 MYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAV-------FNERFQPYESHIPYILQF 213
+YG+ +E+ +LKI + +P ++++ + G E + Y+ +I Y+L+F
Sbjct: 189 IYGFWGNEQHAYLKITVTDPKFINRVRSTIEGGNANWKGMWGVTEGIRTYD-NIQYVLRF 247
Query: 214 CIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+D + GM+ +E +++ E + S+CQ+EA+V
Sbjct: 248 MVDCKVQGMAWVEAPATRYKIVPENL--RQSNCQIEAEV 284
>gi|398408323|ref|XP_003855627.1| DNA polymerase delta catalytic subunit [Zymoseptoria tritici
IPO323]
gi|339475511|gb|EGP90603.1| hypothetical protein MYCGRDRAFT_35747 [Zymoseptoria tritici IPO323]
Length = 1107
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 43/183 (23%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLY----IPFHH---EPIT---ETMLQQLAASIDKAL 138
+++FG EG + V YLY I F EP E+ L Q +A+I
Sbjct: 126 TVKLFGVTEEGHSVLLHVTDFLHYLYVAAPIAFTKNDCEPFKVFLESSLAQHSAAIQ--- 182
Query: 139 NIALGYKDSVQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-AVF 196
SVQ V + M+G+ + ++ +LKI + +P +++L + +G A +
Sbjct: 183 --------SVQMVMREN------MFGFQGNTKSPYLKITVTDPKFINRLRTTIESGNANY 228
Query: 197 NERFQPYES------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQ 247
++ E I Y+L+F +D + GMS + N K+ +P + S+CQ
Sbjct: 229 KGLWKVAEGGILTFDSIQYVLRFMVDTEISGMSWVSVNAGKYH-----MIPMRDRQSNCQ 283
Query: 248 LEA 250
+EA
Sbjct: 284 IEA 286
>gi|153803852|gb|AAW55994.2| DNA polymerase [Myodes glareolus rhadinovirus 1]
Length = 749
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 32/250 (12%)
Query: 9 IDFFMSKPIAHFDPVHSELRNLVIQKVPVIRVFGNNIEGKKTCVFVHGVFPYLYIPFHHE 68
+ F S ++ P S + Q+VP NNIE V+ + Y E
Sbjct: 58 LTFLNSSKLSILQPNQSSIWAQDRQRVPSSGADVNNIE-----FHVYDITSCTYTADRCE 112
Query: 69 PITETIVHSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ 128
V L+ ++ +IR+ G +G+ CV V G Y Y+ + +Q
Sbjct: 113 D-----VAFRLQTEIVPTGNIIRLLGRLDDGQTVCVNVFGQPIYFYVKIDDGLKVSSKIQ 167
Query: 129 QLAASIDKALNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLED 188
+L AS K F + K P+ Y F K+ L + + ++ D
Sbjct: 168 ELMAS----------QKGKNGPSFSVKPVSKLPLTTYCESPSVFYKVTLSSNHMLYQICD 217
Query: 189 LLLN-GAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQ 247
L + GA +ES++ + +F ID++ +G + K + + SL K S
Sbjct: 218 ALRDMGADL------FESNVDAVQRFLIDHD-FGT----YGWYKCKLGHKRSLNKDSRAD 266
Query: 248 LEADVKAESI 257
+E D E +
Sbjct: 267 IEIDCHLEDL 276
>gi|198469284|ref|XP_001354975.2| GA11804 [Drosophila pseudoobscura pseudoobscura]
gi|198146799|gb|EAL32031.2| GA11804 [Drosophila pseudoobscura pseudoobscura]
Length = 846
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 299 MDPDVYSM-QDLLDVKSGALYLK-LKDLVSACSIFRMRAILLGQEP-HLLMDPDVYSMQD 355
++ +YS +DL + + L+ +K+ + C + P HL D D++SM D
Sbjct: 700 LNAQLYSKHKDLAKARRRRIQLQSVKEFIGNCRFATRESAFFNAIPLHLTQDGDMWSMCD 759
Query: 356 LLDVKSGALYLKLKDLVSACSSHVYNC 382
+DV++ ++ +K+L+ HV NC
Sbjct: 760 FVDVQNSSMSRSIKELILLSEQHVKNC 786
>gi|78127846|gb|ABB22230.1| DNA polymerase-like protein [Ovine herpesvirus 2]
Length = 998
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V+++FG +G+ CV V G Y Y+ HH+ L + L + G++ +
Sbjct: 122 VLKLFGRTEDGRSVCVNVFGQRVYFYV--HHDSYA-----NLQRDVQHVLQES-GHRSAG 173
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIP 208
H+ ++ KKF + GY +I L+ M L + L N +Q +E+++
Sbjct: 174 VHI--ATVHKKF-LNGYSTSSSEVRQITLWSSPAMRNLANGLSNMG-----YQVFEANVD 225
Query: 209 YILQFCID-----YNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
+F ID + Y SN R SH QLE D + D
Sbjct: 226 ASTRFIIDNQFSTFGWYTCSNFSARASDHRD---------SHTQLEYDCAVGDVRFD 273
>gi|83642849|ref|YP_438136.1| ORF9 [Ovine herpesvirus 2]
gi|61970963|gb|AAX58048.1| ORF9 [Ovine herpesvirus 2]
Length = 998
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
V+++FG +G+ CV V G Y Y+ HH+ L + L + G++ +
Sbjct: 122 VLKLFGRTEDGRSVCVNVFGQRVYFYV--HHDSYA-----NLQRDVQHVLQES-GHRSAG 173
Query: 149 QHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIP 208
H+ ++ KKF + GY +I L+ M L + L N +Q +E+++
Sbjct: 174 VHI--ATVHKKF-LNGYSTSSSEVRQITLWSSPAMRNLANGLSNMG-----YQVFEANVD 225
Query: 209 YILQFCID-----YNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVD 260
+F ID + Y SN R SH QLE D + D
Sbjct: 226 ASTRFIIDNQFSTFGWYTCSNFSARASDHRD---------SHTQLEYDCAVGDVRFD 273
>gi|341892504|gb|EGT48439.1| hypothetical protein CAEBREN_15911 [Caenorhabditis brenneri]
Length = 1075
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L D D+YS DL+DVKSGAL +L ++ SHV +C
Sbjct: 951 FRRR---LWPKEYLRSDLDLYSFSDLVDVKSGALQRRLGHILRHSISHVMSC 999
>gi|328699405|ref|XP_001948669.2| PREDICTED: differentially expressed in FDCP 8 homolog
[Acyrthosiphon pisum]
Length = 423
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 300 DPDVYS-MQDLLDVKS-GALYLKLKDLVSACSIFRMRAILLGQEPH-LLMDPDVYSMQDL 356
+P +Y+ ++ L +KS + +K+K + C ++ + + H LL D +YSM+D+
Sbjct: 275 NPKLYTYLESLNQIKSIKNILVKMKKYLVLCKVWNAQLKNVSSRCHELLYDSILYSMKDM 334
Query: 357 LDVKSGALYLKLKDLVSACSSHV-YNCE 383
+++KSG L+ + C H+ Y CE
Sbjct: 335 VEIKSGLFLEDLQAVKDVCEKHIRYECE 362
>gi|53759071|gb|AAC26681.2| DNA polymerase catalytic subunit [Hawaiian green turtle
herpesvirus]
Length = 1091
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 21/182 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL------ 142
VI + G+ +G++ + V+G Y YI E + M A + K L L
Sbjct: 135 VITLMGSTTDGRRVAIHVYGSNAYFYI--DKEEAEKRMDVSGAPELKKRLCALLQSSTRL 192
Query: 143 -GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQ 201
+++V F + + +Y Y + R F ++ H+ L+DLL
Sbjct: 193 TDQRNAVPEAFRVDTVDRQDIYYYDSRPRPFYRVHAKNHRHVQSLKDLLP--------VT 244
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
YE+ + + +F ID + F + R+ S AD++ + D+
Sbjct: 245 VYEARVDPVTRFLIDNENFS----SFGWYRLRTGHRARFRDPSAAATSADIELDCTSDDL 300
Query: 262 AA 263
A
Sbjct: 301 EA 302
>gi|153803867|gb|ABN49966.1| DNA polymerase [Microtus agrestis rhadinovirus 1]
Length = 756
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 19/148 (12%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
L+ V+ VIR+ G G+ CV V G Y Y E +Q++ +S
Sbjct: 132 RLQTEVVPTGNVIRLLGRLCSGETVCVNVFGQQIYFYAKIDDELKITRKIQEIMSS---- 187
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLN-GAVF 196
+ F ++ K P+ Y D TF KI L + + ++ D L + GA+
Sbjct: 188 ------QRGKYGPSFSVTPVTKLPLTSYSKDASTFYKITLSSNHMLYQICDALQDLGALL 241
Query: 197 NERFQPYESHIPYILQFCIDYNL--YGM 222
+E+++ + +F ID N YG
Sbjct: 242 ------FEANVDPLQRFLIDNNFGTYGW 263
>gi|392892357|ref|NP_001254407.1| Protein Y51H1A.2, isoform a [Caenorhabditis elegans]
gi|453231875|ref|NP_001263682.1| Protein Y51H1A.2, isoform a [Caenorhabditis elegans]
gi|423098610|emb|CCO25898.1| Protein Y51H1A.2, isoform a [Caenorhabditis elegans]
Length = 955
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L + DVYS DL+DVKSGAL +L L+ +HV C
Sbjct: 831 FRRR---LWPKEYLRSEIDVYSFADLIDVKSGALQRRLNSLLKHSINHVMTC 879
>gi|392892359|ref|NP_001254408.1| Protein Y51H1A.2, isoform b [Caenorhabditis elegans]
gi|453231877|ref|NP_001263683.1| Protein Y51H1A.2, isoform b [Caenorhabditis elegans]
gi|423098611|emb|CCO25899.1| Protein Y51H1A.2, isoform b [Caenorhabditis elegans]
Length = 945
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L + DVYS DL+DVKSGAL +L L+ +HV C
Sbjct: 821 FRRR---LWPKEYLRSEIDVYSFADLIDVKSGALQRRLNSLLKHSINHVMTC 869
>gi|91078782|ref|XP_969464.1| PREDICTED: similar to CG11534 CG11534-PA [Tribolium castaneum]
gi|270004105|gb|EFA00553.1| hypothetical protein TcasGA2_TC003420 [Tribolium castaneum]
Length = 428
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 273 GITRYLSDVLLNSMRAILLGQE---PHLLMDPDVYSMQDLLDVKSGALYLKLKDLVS--- 326
G+ +YLS V N+ LL + PHL+ P++YS+QDL+D SG L KL ++
Sbjct: 296 GMRKYLS-VCRNANEDHLLWKHVDVPHLIETPELYSLQDLVDTHSGELPTKLHTIIDVFS 354
Query: 327 -----ACSIFRMRAIL 337
C + R R L
Sbjct: 355 KHIKVKCEVCRGRGHL 370
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 342 PHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV 379
PHL+ P++YS+QDL+D SG L KL ++ S H+
Sbjct: 320 PHLIETPELYSLQDLVDTHSGELPTKLHTIIDVFSKHI 357
>gi|354550186|gb|AER28055.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|354550266|gb|AER28134.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|380259403|gb|AFD36571.1| UL30 protein [Gallid herpesvirus 1]
gi|380259483|gb|AFD36650.1| UL30 protein [Gallid herpesvirus 1]
gi|390987563|gb|AFM36235.1| UL30 protein [Gallid herpesvirus 1]
gi|390987722|gb|AFM36392.1| UL30 protein [Gallid herpesvirus 1]
gi|390987801|gb|AFM36470.1| UL30 protein [Gallid herpesvirus 1]
gi|393008352|gb|AFN02011.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|440658230|gb|AGC23061.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|440658310|gb|AGC23140.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
Length = 1092
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 60 YLYIPFHHEPITETIV---HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP 116
++Y F + I ++ V HS + + VI + GN+ GK+ V V+G PY ++
Sbjct: 106 HVYDLFENTEIAQSCVRWMHSRFLDTLKPTGTVITLVGNSACGKRVAVHVYGSLPYFFVK 165
Query: 117 FHH--EPITETMLQQLAASIDKALNIALGYKDS-----VQHVFHISICKKFPMYGYHADE 169
+ T ++LA ++ A K+S F I + ++ +Y + ++E
Sbjct: 166 KREIDQAAKVTNSEELAHALALATR-KTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE 224
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNM 229
F ++ + M + D F YES++ I +F +D NL F
Sbjct: 225 EDFYRVKVCNGKVMKFICD------NFFPSVPKYESNVDAITRFILDNNL-----TSFGW 273
Query: 230 VKFRSDS 236
+FR+
Sbjct: 274 YRFRAQG 280
>gi|344299649|gb|EGW30002.1| DNA polymerase delta catalytic subunit [Spathaspora passalidarum
NRRL Y-27907]
Length = 1079
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 16/173 (9%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSVQH 150
R FG G V G Y Y+P + + LQQ + + +
Sbjct: 112 RFFGITEAGHSVLCNVVGFIHYFYVPVPKGFVKDQHLQQFTNYLHA----------NYEG 161
Query: 151 VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAV-FNERFQPYESH-- 206
+ + I K ++GY+ + +T F K+ + +++KL G + F F S+
Sbjct: 162 IDKVEITLKETIWGYNRNIKTPFFKVFVNNTRNITKLRTAFERGDIRFENLFSETVSYDN 221
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVV 259
I Y+++ ID + GMS I K++ + K+S CQ+E + ++
Sbjct: 222 INYLMRLMIDCKITGMSWITLPKSKYKMVPDNL--KISSCQIECSIDYRDLIT 272
>gi|341884973|gb|EGT40908.1| hypothetical protein CAEBREN_01726 [Caenorhabditis brenneri]
Length = 870
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L D D+YS DL+DVKSGAL +L ++ SHV +C
Sbjct: 746 FRRR---LWPKEYLRSDLDLYSFSDLVDVKSGALQRRLGHILRHSISHVMSC 794
>gi|221487122|gb|EEE25368.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 1268
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIP 116
P+ RV+G +G+ C VHG FPY Y P
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFYCP 208
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 36 PVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
P+ RV+G +G+ C VHG FPY Y P
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFYCP 208
>gi|393008272|gb|AFN01932.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
Length = 1092
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 36/194 (18%)
Query: 60 YLYIPFHHEPITETIV---HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP 116
++Y F + I ++ V HS + + VI + GN+ GK+ V V+G PY ++
Sbjct: 106 HVYDLFENTEIAQSCVRWMHSRFLDTLKPTGTVITLVGNSACGKRVAVHVYGSLPYFFVK 165
Query: 117 FHH--EPITETMLQQLAASIDKALNIALGYKDS-----VQHVFHISICKKFPMYGYHADE 169
+ T ++LA ++ A K+S F I + ++ +Y + ++E
Sbjct: 166 KREIDQAAKVTNSEELAHALALATR-KTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE 224
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFN---ERFQP----YESHIPYILQFCIDYNLYGM 222
F ++ + NG V + F P YES++ I +F +D NL
Sbjct: 225 EDFYRV-------------KVCNGKVMKFICDNFFPSVPKYESNVDAITRFILDNNL--- 268
Query: 223 SNIEFNMVKFRSDS 236
F +FR+
Sbjct: 269 --TSFGWYRFRAQG 280
>gi|380259323|gb|AFD36492.1| UL30 protein [Gallid herpesvirus 1]
Length = 1092
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 60 YLYIPFHHEPITETIV---HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP 116
++Y F + I ++ V HS + + VI + GN+ GK+ V V+G PY ++
Sbjct: 106 HVYDLFENTEIAQSCVRWMHSRFLDTLKPTGTVITLVGNSACGKRVAVHVYGSLPYFFVK 165
Query: 117 FHH--EPITETMLQQLAASIDKALNIALGYKDS-----VQHVFHISICKKFPMYGYHADE 169
+ T ++LA ++ A K+S F I + ++ +Y + ++E
Sbjct: 166 KREIDQAAKVTNSEELAHALALATR-KTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE 224
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNM 229
F ++ + M + D F YES++ I +F +D NL F
Sbjct: 225 EDFYRVKVCNGKVMKFICD------NFFPSVPKYESNVDAITRFILDNNL-----TSFGW 273
Query: 230 VKFRSDS 236
+FR+
Sbjct: 274 YRFRAQG 280
>gi|378726376|gb|EHY52835.1| DNA polymerase delta subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 162 MYGYHADERT-FLKILLYEPYHMSKLEDLLLNG-----AVFN---ERFQPYESHIPYILQ 212
+YG+ ++++ +LKI + +P + +L + G ++N + + Y+ +I Y+L+
Sbjct: 192 LYGFQGNQKSPYLKITVNDPKFIGRLRSAIEEGNANYKGMWNVEKNKIKTYD-NIQYVLR 250
Query: 213 FCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
F ID + GMS +E K+ S + S+CQ+EA
Sbjct: 251 FMIDTGITGMSWVEVPPQKYH--VLPSYDRQSNCQIEA 286
>gi|329738358|gb|AEB97322.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|364933807|gb|AEW67774.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|364933926|gb|AEW67853.1| DNA polymerase catalytic subunit [Gallid herpesvirus 1]
gi|380259563|gb|AFD36729.1| UL30 protein [Gallid herpesvirus 1]
gi|390987643|gb|AFM36314.1| UL30 protein [Gallid herpesvirus 1]
gi|390987881|gb|AFM36549.1| UL30 protein [Gallid herpesvirus 1]
gi|390987961|gb|AFM36628.1| UL30 protein [Gallid herpesvirus 1]
Length = 1092
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 60 YLYIPFHHEPITETIV---HSELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIP 116
++Y F + I ++ V HS + + VI + GN+ GK+ V V+G PY ++
Sbjct: 106 HVYDLFENTEIAQSCVRWMHSRFLDTLKPTGTVITLVGNSACGKRVAVHVYGSLPYFFVK 165
Query: 117 FHH--EPITETMLQQLAASIDKALNIALGYKDS-----VQHVFHISICKKFPMYGYHADE 169
+ T ++LA ++ A K+S F I + ++ +Y + ++E
Sbjct: 166 KREIDQAAKVTNSEELAHALALATR-KTSLKNSPFLAVSAESFCIDVVRRRDIYYFESEE 224
Query: 170 RTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYNLYGMSNIEFNM 229
F ++ + M + D F YES++ I +F +D NL F
Sbjct: 225 EDFYRVKVCNGKVMKFICD------NFFPSVPKYESNVDAITRFILDNNL-----TSFGW 273
Query: 230 VKFRSDS 236
+FR+
Sbjct: 274 YRFRAQG 280
>gi|237831459|ref|XP_002365027.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211962691|gb|EEA97886.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|221506807|gb|EEE32424.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 1268
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 88 PVIRVFGNNVEGKKTCVFVHGVFPYLYIP 116
P+ RV+G +G+ C VHG FPY Y P
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFYCP 208
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 36 PVIRVFGNNIEGKKTCVFVHGVFPYLYIP 64
P+ RV+G +G+ C VHG FPY Y P
Sbjct: 180 PMFRVYGVTEDGRSVCANVHGFFPYFYCP 208
>gi|392892361|ref|NP_001254409.1| Protein Y51H1A.2, isoform c [Caenorhabditis elegans]
gi|453231879|ref|NP_001263684.1| Protein Y51H1A.2, isoform c [Caenorhabditis elegans]
gi|423098612|emb|CCO25900.1| Protein Y51H1A.2, isoform c [Caenorhabditis elegans]
Length = 480
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L + DVYS DL+DVKSGAL +L L+ +HV C
Sbjct: 356 FRRR---LWPKEYLRSEIDVYSFADLIDVKSGALQRRLNSLLKHSINHVMTC 404
>gi|429852563|gb|ELA27695.1| DNA polymerase delta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1102
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 151 VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYES--- 205
+ IS + +YG+ + + +LKI + +P +S++ + G A + ++ E
Sbjct: 178 IHSISFVMRENIYGFQGNVQSPYLKITVMDPKFISRVRSTIETGSANWKGLWKGMEGGVM 237
Query: 206 ---HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+I Y+L+F +D ++GMS +E ++ ++ + S+CQ+EA++
Sbjct: 238 TFDNIQYVLRFMVDCKIHGMSWVEAPAKSYQLLPQSQ--RQSNCQIEAEI 285
>gi|392892363|ref|NP_001254410.1| Protein Y51H1A.2, isoform d [Caenorhabditis elegans]
gi|453231881|ref|NP_001263685.1| Protein Y51H1A.2, isoform d [Caenorhabditis elegans]
gi|423098613|emb|CCO25901.1| Protein Y51H1A.2, isoform d [Caenorhabditis elegans]
Length = 389
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L + DVYS DL+DVKSGAL +L L+ +HV C
Sbjct: 265 FRRR---LWPKEYLRSEIDVYSFADLIDVKSGALQRRLNSLLKHSINHVMTC 313
>gi|392892365|ref|NP_001254411.1| Protein Y51H1A.2, isoform e [Caenorhabditis elegans]
gi|453231883|ref|NP_001263686.1| Protein Y51H1A.2, isoform e [Caenorhabditis elegans]
gi|423098614|emb|CCO25902.1| Protein Y51H1A.2, isoform e [Caenorhabditis elegans]
Length = 339
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L + DVYS DL+DVKSGAL +L L+ +HV C
Sbjct: 215 FRRR---LWPKEYLRSEIDVYSFADLIDVKSGALQRRLNSLLKHSINHVMTC 263
>gi|389634743|ref|XP_003715024.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351647357|gb|EHA55217.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440470521|gb|ELQ39588.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae Y34]
gi|440488502|gb|ELQ68227.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae P131]
Length = 1103
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 34/187 (18%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKAL---NIALGYK 145
+++FG +G + V YLY+ T Q + KA NIA
Sbjct: 123 TVKLFGVTEDGNSVMLHVKEFRHYLYV------AAPTSFGQKDCNAFKAFLETNIA---- 172
Query: 146 DSVQH---VFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQ 201
QH + + + + +YG+ + + FLKI + +P ++K+ + +G N ++
Sbjct: 173 ---QHQPAIHSVQMTMRENIYGFQNNTQNPFLKITVTDPKFINKVRSTIESG---NANWK 226
Query: 202 PYESH---------IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
H I Y+L+F +D + GMS +E + E+ + S+CQ+EA++
Sbjct: 227 GMWKHDGGIMTFDNIQYVLRFMVDCKIQGMSWVEAPAATYTLVPESQ--RQSNCQIEAEM 284
Query: 253 KAESIVV 259
++
Sbjct: 285 SYRDLIA 291
>gi|34395919|gb|AAF63493.2|AF239684_1 polymerase [Green turtle herpesvirus]
Length = 1097
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 21/182 (11%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIAL------ 142
VI + G+ +G++ + V+G Y YI E + M A + K L L
Sbjct: 135 VITLMGSTTDGRRVAIHVYGSNAYFYI--DKEEAEKRMDVSGAPELKKRLCALLQSSTRL 192
Query: 143 -GYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQ 201
+++V F + + +Y Y + R F ++ H+ L+DLL
Sbjct: 193 TDQRNAVPEAFRVDTVDRQDIYYYDSRPRPFYRVHAKNHRHVQSLKDLLP--------VT 244
Query: 202 PYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIVVDM 261
YE+ + + +F ID + F + R+ S AD++ + D+
Sbjct: 245 VYEARVDPVTRFLIDNENFS----SFGGYRLRTGHRARFRDPSAAATSADIELDCTSDDL 300
Query: 262 AA 263
A
Sbjct: 301 EA 302
>gi|358389733|gb|EHK27325.1| hypothetical protein TRIVIDRAFT_33534 [Trichoderma virens Gv29-8]
Length = 1105
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKALNIALGYKDSV 148
+++FG EG + V YLY+ P++ QQ D AL A
Sbjct: 124 AVKLFGVTEEGYSVMLHVTDFKHYLYVA---APLS---FQQK----DCALYKAYLETQVA 173
Query: 149 QH---VFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG--------AVF 196
QH + +S+ + +Y Y + + +LKI + +P ++ + + G
Sbjct: 174 QHQPAIHSVSLTMREDIYHYQGNVQSPYLKITVTDPKFINTVRSTIEKGLANWKGMWGAL 233
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADV 252
+ + Y+ +I Y+L+F +D + GMS +E ++ E S + S+CQ+EA+V
Sbjct: 234 DGGLRTYD-NIQYVLRFMVDCKIQGMSWVEAPASSYKMIPEHS--RQSNCQIEAEV 286
>gi|195439164|ref|XP_002067501.1| GK16461 [Drosophila willistoni]
gi|194163586|gb|EDW78487.1| GK16461 [Drosophila willistoni]
Length = 799
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 349 DVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
D++SM DL+DV++G++ +++L+ HVYNC
Sbjct: 696 DLWSMCDLVDVQNGSMARSIEELIELSEKHVYNC 729
>gi|440493562|gb|ELQ76017.1| DNA polymerase delta, catalytic subunit [Trachipleistophora
hominis]
Length = 1386
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 159 KFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESHIPYILQFCIDYN 218
K +YGY D +FLK+ + S N ++ ++S+IP+ LQF +D
Sbjct: 75 KKNIYGYTMDNESFLKVFFWNVVVESAARRACEN------VYEVFDSNIPFNLQFMVDMG 128
Query: 219 LYGMSNIEFNM 229
+ GMS ++ +M
Sbjct: 129 IVGMSYLKIDM 139
>gi|326328559|gb|AAW55996.2| DNA polymerase [Pan troglodytes roseolovirus 1]
Length = 736
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 78 ELRNLVIQKVPVIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQQLAASIDKA 137
+ R+ VI VI++FG G K CV V G Y Y E + + L A+I+
Sbjct: 105 QYRHYVIPSGTVIKMFGRTEHGDKICVNVFGQNQYFYC----ECVDR---KSLKATIN-- 155
Query: 138 LNIALGYKDSVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFN 197
N+ L + + F I K +YGY+A+ L + + +++S+ +L N
Sbjct: 156 -NLMLTGEVKMSCSFVIEPADKLSLYGYNANTVVNLFKVSFGNFYVSQRIGKILQ----N 210
Query: 198 ERFQPYESHIPYILQFCID 216
E F YE + + +F +D
Sbjct: 211 EGFVVYEIDVDVLTRFFVD 229
>gi|407039462|gb|EKE39667.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba nuttalli
P19]
Length = 1385
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 93 FGNNVEGKKTCVFVHGVFPYLYIPFH------HEPITETMLQQLAASIDKALNIALGYKD 146
FG+ +G C+ +G +L I +EPI + + L +I++ +N +
Sbjct: 31 FGHQEDGNTCCIIFYGWRSHLDIDLTELNKRINEPIGDVFID-LVETINEVINEQRPKEK 89
Query: 147 SVQHVFHISICKKFPMYGYHADERTFLKILLYEPYHMSKLEDLLLNGAVFNE-RFQPYES 205
+ + H+ + + P GYH TF ++ L ++++ + NE YE+
Sbjct: 90 QYRIIDHLEVIEGIPFVGYHTRRHTFGRVWLKNHKDINQVR------KICNEMDINIYEA 143
Query: 206 HIPYILQFCIDYNLYGMSNIEFNMV 230
H+ + F D L M + FN +
Sbjct: 144 HLSPDIMFMTDLGLRTMVFVHFNAL 168
>gi|312385493|gb|EFR29979.1| hypothetical protein AND_00726 [Anopheles darlingi]
Length = 506
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 338 LGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
LG+ HL+ D+YS+ DL+ +++G+L L+ + +A H+ NC
Sbjct: 436 LGERRHLMQSTDLYSVSDLVGIENGSLLGYLRTVYAAFEQHIRNC 480
>gi|367024855|ref|XP_003661712.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
gi|347008980|gb|AEO56467.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
Length = 1081
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPITETMLQ--QLAASIDKALNIALGYKD 146
I++FG G + V YLY+ P++ T + A ++ L +
Sbjct: 126 TIKLFGVTENGNSVLLHVRDFKHYLYVA---APVSFTAEDCPKFQAYLESQLAL------ 176
Query: 147 SVQHVFHISICKKFPMYGYHAD-ERTFLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYE 204
S + + +++ + +YG+ + + +LKI + +P + K+ + G A + + ++ +
Sbjct: 177 SQRAIHSVTLTMRENIYGFQGNVQSPYLKITVTDPKLIGKVRSTIERGDANYKKMWKSSD 236
Query: 205 S------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSL--PKLSHCQLEADVKAES 256
+I Y+L+F +D ++ GM+ +E K+ SL K S+CQ+EA +
Sbjct: 237 GTIMTFDNIQYLLRFMVDCSIAGMAWVEAPAGKY------SLVHDKQSNCQIEAQISYRD 290
Query: 257 IV 258
++
Sbjct: 291 LI 292
>gi|156041052|ref|XP_001587512.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980]
gi|154695888|gb|EDN95626.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1106
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 151 VFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH--- 206
+ +S+ + +YG+ +++ ++K+ + +P +++K+ + G + + +
Sbjct: 181 IHSVSVVLRENLYGFTGNKQHAYIKVTVTDPRYINKVRTTIEEGRANWKGMWRNDGNGIL 240
Query: 207 ----IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLP---KLSHCQLEA 250
I Y+L+F +D ++GMS +E K+ T +P + S+CQ+EA
Sbjct: 241 TFDSIQYVLRFMVDVKIHGMSWVEVEAKKY-----TIVPEHNRQSNCQIEA 286
>gi|426219285|ref|XP_004003857.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein [Ovis aries]
Length = 946
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 292 GQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSIFRMRAILLGQEP-HLLMDPDV 350
G++PH M V + +LL ++ +K++ C + + P HL D +
Sbjct: 768 GRKPHRKMSTQVLTDSELLRIQ----LCHMKNMFKTCRLAKELLDAFDTVPGHLTEDLHL 823
Query: 351 YSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
YS+ DL + G L +L +L A ++HV C
Sbjct: 824 YSLNDLTATRKGELGPRLAELTRAGAAHVERC 855
>gi|241957481|ref|XP_002421460.1| DNA polymerase III, putative; DNA polymerase delta catalytic
subunit, putative [Candida dubliniensis CD36]
gi|223644804|emb|CAX40796.1| DNA polymerase III, putative [Candida dubliniensis CD36]
Length = 1040
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 25/172 (14%)
Query: 91 RVFGNNVEGKKTCVFVHGVFPYLYIPF---HHEPITETMLQQLAASIDKALNIALGYKDS 147
R FG EG V G Y Y P E +TE L + D + + K+S
Sbjct: 82 RFFGITQEGHSVLCNVTGFIHYFYCPVPKGFQENLTE-FTNYLRVTFDGIEKVEITSKES 140
Query: 148 VQHVFHISICKKFPMYGYHADERT-FLKILLYEPYHMSKLEDLLLNGAVFNERFQPYESH 206
+ +G+ + +T F KI Y +++K+ NG V N +
Sbjct: 141 I--------------WGFSNNIKTPFFKI--YVNNNIAKIRSAFQNGEVKNIDPCVTYDN 184
Query: 207 IPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEADVKAESIV 258
I Y+L+ ID + GMS I K++ S K+S CQ+E + ++
Sbjct: 185 INYLLRLMIDCKITGMSWITLPQDKYKIVSN----KISTCQIECSIDYRDLI 232
>gi|294897775|ref|XP_002776065.1| hypothetical protein Pmar_PMAR001747 [Perkinsus marinus ATCC 50983]
gi|239882610|gb|EER07881.1| hypothetical protein Pmar_PMAR001747 [Perkinsus marinus ATCC 50983]
Length = 636
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 88 PVIRVFGNNVEGK-----KTCVFVHGVFPYLYIPFHHEPITETMLQ-QLAASIDKALNIA 141
PV+R++G+ V + CV VHG +P + F E +++ + Q A ++ ++ +
Sbjct: 42 PVVRLYGHVVSADPDATVQCCVHVHGYYPKVL--FSAEAFQQSVTERQFADGLEYVMSGS 99
Query: 142 LGYKDSV--QHVFHISICKKFPMYGYHADERTFLKILLYEP---YHMSKLEDLLLNGAVF 196
G + + + ++ +YGYH ++ +P Y ++ L +
Sbjct: 100 GGGQRGQLPPTIVDVKKVQRIDIYGYHETPENVFEVRYVDPGVSYKLAHAYKSLCARSGS 159
Query: 197 NERFQPYESHIPYILQFCIDYNLYGMSNIEFN 228
N + +E HIPY LQ ++ L + + F
Sbjct: 160 NGKI--FELHIPYTLQLVSEHGLAAGATVHFK 189
>gi|303314745|ref|XP_003067381.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107049|gb|EER25236.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1110
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI--TETMLQQLAASIDKALNIALGYKD 146
+R+FG G + V YLY+ P+ T++ + A ++ + G
Sbjct: 129 AVRLFGVTEAGHSVLLHVTDFKHYLYVA---APVSFTKSDCEPFGAYLENHV----GNHQ 181
Query: 147 SVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYE 204
+V H ++ + K ++G+ +++ +L+I + +P +++++ + +G A + ++
Sbjct: 182 TVIH--NVQMVMKENLFGFQGNQQHPYLRITVTDPKYINRVRSTIESGNANYRGLWKVGG 239
Query: 205 S-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ +I YIL+F ID + GMS +E K+R E + S+CQ+EA
Sbjct: 240 TDGILTFDNIQYILRFMIDTGISGMSWVEVPPSKYRIVPEHQ--RYSNCQIEA 290
>gi|320037710|gb|EFW19647.1| DNA polymerase delta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1110
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 89 VIRVFGNNVEGKKTCVFVHGVFPYLYIPFHHEPI--TETMLQQLAASIDKALNIALGYKD 146
+R+FG G + V YLY+ P+ T++ + A ++ + G
Sbjct: 129 AVRLFGVTETGHSVLLHVTDFKHYLYVA---APVSFTKSDCEPFGAYLENHV----GNHQ 181
Query: 147 SVQHVFHISICKKFPMYGYHADER-TFLKILLYEPYHMSKLEDLLLNG-AVFNERFQPYE 204
+V H ++ + K ++G+ +++ +L+I + +P +++++ + +G A + ++
Sbjct: 182 TVIH--NVQMVMKENLFGFQGNQQHPYLRITVTDPKYINRVRSTIESGNANYRGLWKVGG 239
Query: 205 S-------HIPYILQFCIDYNLYGMSNIEFNMVKFRSDSETSLPKLSHCQLEA 250
+ +I YIL+F ID + GMS +E K+R E + S+CQ+EA
Sbjct: 240 TDGILTFDNIQYILRFMIDTGISGMSWVEVPPSKYRIVPEHQ--RYSNCQIEA 290
>gi|268532778|ref|XP_002631517.1| Hypothetical protein CBG20681 [Caenorhabditis briggsae]
Length = 385
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 331 FRMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHVYNC 382
FR R L + +L D +YS DL+DVKSG+L +LK ++ ++HV +C
Sbjct: 261 FRRR---LWPKEYLRSDIHLYSFADLIDVKSGSLLRRLKHILKHSTTHVMSC 309
>gi|405976501|gb|EKC41006.1| Differentially expressed in FDCP 8-like protein A [Crassostrea
gigas]
Length = 572
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 283 LNSMRAILLGQEPHLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSIFRMRAILLGQEP 342
L + +A++ Q+ + ++ V + D+ ++ L +K LV ++ + +LL +
Sbjct: 412 LMTSKAVIRIQDVNPMLFNFVEELNDVKKLREELLIMKKYLLVCTEAMKKKFLLLLSERQ 471
Query: 343 HLLMDPDVYSMQDLLDVKSGALYLKLKDLVSACSSHV-YNCEPTNA 387
H + D YSMQDLLD+ S L +L ++ + + H+ +C+ A
Sbjct: 472 HFVETSDKYSMQDLLDITSDTLLPELANIHTTWAQHIKTDCQKCQA 517
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,843,513,953
Number of Sequences: 23463169
Number of extensions: 238329746
Number of successful extensions: 710884
Number of sequences better than 100.0: 900
Number of HSP's better than 100.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 466
Number of HSP's that attempted gapping in prelim test: 708472
Number of HSP's gapped (non-prelim): 1910
length of query: 387
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 243
effective length of database: 8,980,499,031
effective search space: 2182261264533
effective search space used: 2182261264533
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)