BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy592
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 136/203 (66%), Gaps = 31/203 (15%)
Query: 4 ILNIVTITYLYDLANPGLHKNSVPGCPATEAVC-NAHSRLHCYPEHGVCVGSMHTAKCQC 62
I N+V + LYDLA+PGL +NSV GCP TE VC + C+ EHG CVGS+ A+C C
Sbjct: 2560 IRNLVHNSKLYDLAHPGLSRNSVAGCPQTEEVCAQTETTARCW-EHGNCVGSLSEARCHC 2618
Query: 63 LPGWSGTGCVTPTSPVTFKPQSYIKYALSFEPDKYTTQLQLKFRTREEFGELFRLSDQHN 122
PGW+G C PT P TFK QSY+KYALSFEPD+++TQ+QL+FRTREE+GELFR+SDQHN
Sbjct: 2619 RPGWTGPACNIPTIPTTFKAQSYVKYALSFEPDRFSTQVQLRFRTREEYGELFRVSDQHN 2678
Query: 123 REYAILEIKDSKLRFRYNLNNLKTDEKDIWLNAIKDSKLRFRYNLNNLKTDEKDIWLNAV 182
REY ILEIKD L FRYNLN+L+T+EKD+WLNAI
Sbjct: 2679 REYGILEIKDGHLHFRYNLNSLRTEEKDLWLNAI-------------------------- 2712
Query: 183 AVNDGQWHFVKT---GSALFVTL 202
VNDGQWH VK GSA + L
Sbjct: 2713 VVNDGQWHVVKVNRYGSAATLEL 2735
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/122 (81%), Positives = 105/122 (86%), Gaps = 4/122 (3%)
Query: 217 YSRRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP----EMNN 272
Y+RRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGP P M
Sbjct: 2938 YNRRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPMPPELAPMKM 2997
Query: 273 KIPYGLGPMPMGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
I Y + + G EPNVG+FIEEHKKRAD DPNAPPFDDLRNYAYEGGGSTAGSLSSLAS
Sbjct: 2998 PIMYPVMTLMPGQEPNVGMFIEEHKKRADGDPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 3057
Query: 333 GS 334
G+
Sbjct: 3058 GT 3059
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 127/203 (62%), Gaps = 31/203 (15%)
Query: 4 ILNIVTITYLYDLANPGLHKNSVPGCPATEAVC-NAHSRLHCYPEHGVCVGSMHTAKCQC 62
I N++ + YDLA P L +NS P CP T+ VC C+ EHG CV S+ AKC C
Sbjct: 1362 IRNVIHNSEHYDLAFPALARNSFPACPQTDEVCLKTEHTARCW-EHGNCVASLVQAKCHC 1420
Query: 63 LPGWSGTGCVTPTSPVTFKPQSYIKYALSFEPDKYTTQLQLKFRTREEFGELFRLSDQHN 122
PGW G GC PT P TFK QSY+K+ALSFEPD+++TQLQL+FRTRE+ GELFR+SDQH+
Sbjct: 1421 QPGWMGPGCNVPTIPTTFKAQSYVKFALSFEPDRFSTQLQLRFRTREQGGELFRVSDQHH 1480
Query: 123 REYAILEIKDSKLRFRYNLNNLKTDEKDIWLNAIKDSKLRFRYNLNNLKTDEKDIWLNAV 182
REYAILE++ L+FRYNLN+++ +E+ + L AI
Sbjct: 1481 REYAILELRRGHLQFRYNLNSMRNEEQLLTLTAI-------------------------- 1514
Query: 183 AVNDGQWHFVKT---GSALFVTL 202
AVNDGQWH ++ GSA + L
Sbjct: 1515 AVNDGQWHVIRISRYGSAALMEL 1537
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 120/197 (60%), Gaps = 16/197 (8%)
Query: 156 IKDSKLRFRYNL-NNLKTDEKDIW-LNAVAVNDGQWHFVKTGSALFVTLLISPN---QVL 210
+ K F Y + +NL + + +W L +++ W + F+ IS N ++L
Sbjct: 1757 LSQCKCVFSYAMHDNLFSFRQLVWDLKGFSISATLWALFRMA---FIYTYISVNSGKRLL 1813
Query: 211 VLVFVVYSRRREAHIKY--PGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPI---GG 265
L+FV+YSR+R+ K GP+ DVRE +I+Y+DEGGGEDDMTAFDITPLQIPI GG
Sbjct: 1814 ALIFVLYSRKRKTTKKKKRSGPEKDVRETVISYEDEGGGEDDMTAFDITPLQIPISAQGG 1873
Query: 266 PHPEMNNKIPY---GLGPMPMGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGS 322
P K+P + +P G E NV +EE K+R D D NAPPFDDLRN+ +EG GS
Sbjct: 1874 PPDIAACKMPIIYPVMTLLPPGQELNVAYLMEERKQRIDKDNNAPPFDDLRNFTFEGSGS 1933
Query: 323 TAGSLSSLASGSSIKNN 339
A SLSSLASG+ +N
Sbjct: 1934 IAESLSSLASGTDDENQ 1950
>sp|O93319|CAD11_CHICK Cadherin-11 OS=Gallus gallus GN=CDH11 PE=2 SV=1
Length = 792
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 13/153 (8%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSR-RREAHIKYPGPDDDVRENIINYDDEGGGEDD 250
+ TG+ + + I V+V++FV R ++E I + ++DVRENII YDDEGGGE+D
Sbjct: 611 LSTGALIAILACIVILLVIVVLFVTLKRQKKEPLIVFE--EEDVRENIITYDDEGGGEED 668
Query: 251 MTAFDITPLQIP--IGGPHPEMNNKIPY------GLGPMPMGVEPNVGIFIEEHKKRADA 302
AFDI LQ P I G P + K Y GL P P V+ V FI + AD
Sbjct: 669 TEAFDIATLQNPDGINGFIPRKDIKPEYQYMPRPGLRPAPNSVD--VDDFINTRIQEADN 726
Query: 303 DPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
DP APP+D ++ Y YEG GS AGSLSSL S ++
Sbjct: 727 DPTAPPYDSIQIYGYEGRGSVAGSLSSLESATT 759
>sp|P55288|CAD11_MOUSE Cadherin-11 OS=Mus musculus GN=Cdh11 PE=1 SV=1
Length = 796
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 13/153 (8%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSR-RREAHIKYPGPDDDVRENIINYDDEGGGEDD 250
+ TG+ + + I V+V++FV R ++E I + ++DVRENII YDDEGGGE+D
Sbjct: 615 LSTGALIAILACIVILLVIVVLFVTLRRQKKEPLIVFE--EEDVRENIITYDDEGGGEED 672
Query: 251 MTAFDITPLQIP--IGGPHPEMNNKIPY------GLGPMPMGVEPNVGIFIEEHKKRADA 302
AFDI LQ P I G P + K Y GL P P V+ V FI + AD
Sbjct: 673 TEAFDIATLQNPDGINGFIPRKDIKPEYQYMPRPGLRPAPNSVD--VDDFINTRIQEADN 730
Query: 303 DPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
DP APP+D ++ Y YEG GS AGSLSSL S ++
Sbjct: 731 DPTAPPYDSIQIYGYEGRGSVAGSLSSLESATT 763
>sp|P55287|CAD11_HUMAN Cadherin-11 OS=Homo sapiens GN=CDH11 PE=1 SV=2
Length = 796
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 13/153 (8%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSR-RREAHIKYPGPDDDVRENIINYDDEGGGEDD 250
+ TG+ + + I V+V++FV R ++E I + ++DVRENII YDDEGGGE+D
Sbjct: 615 LSTGALIAILACIVILLVIVVLFVTLRRQKKEPLIVFE--EEDVRENIITYDDEGGGEED 672
Query: 251 MTAFDITPLQIP--IGGPHPEMNNKIPY------GLGPMPMGVEPNVGIFIEEHKKRADA 302
AFDI LQ P I G P + K Y GL P P V+ V FI + AD
Sbjct: 673 TEAFDIATLQNPDGINGFIPRKDIKPEYQYMPRPGLRPAPNSVD--VDDFINTRIQEADN 730
Query: 303 DPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
DP APP+D ++ Y YEG GS AGSLSSL S ++
Sbjct: 731 DPTAPPYDSIQIYGYEGRGSVAGSLSSLESATT 763
>sp|Q08DJ5|CAD18_BOVIN Cadherin-18 OS=Bos taurus GN=CDH18 PE=2 SV=1
Length = 790
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPGPDDDVRENIINYDDEGGGEDDM 251
+ TG+ + + L + +V++F+ R ++ + ++DVREN++ YDDEGGGE+D
Sbjct: 611 LSTGALIAILLCVVILLAIVVLFITLRRSKKEPLIIS--EEDVRENVVTYDDEGGGEEDT 668
Query: 252 TAFDITPLQIPIGGPHPEMNNKI--PYGLGPMPMGVEP----NVGIFIEEHKKRADADPN 305
AFDIT L+ P + I L P + +V FI++ AD DP+
Sbjct: 669 EAFDITALRNPSAAEELKYRRDIRPEVKLTPRHQTLSTLESIDVQEFIKQRLAEADLDPS 728
Query: 306 APPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
PP+D L+ YAYEG S AGS+SSL S ++
Sbjct: 729 VPPYDSLQTYAYEGQRSEAGSISSLDSATT 758
>sp|Q13634|CAD18_HUMAN Cadherin-18 OS=Homo sapiens GN=CDH18 PE=2 SV=1
Length = 790
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPGPDDDVRENIINYDDEGGGEDDM 251
+ TG+ + + L + +V++F+ R ++ + ++DVREN++ YDDEGGGE+D
Sbjct: 611 LSTGALIAILLCVLILLAIVVLFITLRRSKKEPLIIS--EEDVRENVVTYDDEGGGEEDT 668
Query: 252 TAFDITPLQIPIGGPHPEMNNKIPYGLGPMPMGVEP------NVGIFIEEHKKRADADPN 305
AFDIT L+ P + I + P +V FI++ AD DP+
Sbjct: 669 EAFDITALRNPSAAEELKYRRDIRPEVKLTPRHQTSSTLESIDVQEFIKQRLAEADLDPS 728
Query: 306 APPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
PP+D L+ YAYEG S AGS+SSL S ++
Sbjct: 729 VPPYDSLQTYAYEGQRSEAGSISSLDSATT 758
>sp|Q9H159|CAD19_HUMAN Cadherin-19 OS=Homo sapiens GN=CDH19 PE=2 SV=1
Length = 772
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 219 RRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQ---IPIGGPHPEMNNKIP 275
++R I +P +D RENI YDDEGGGE+D AFDI L+ I + +
Sbjct: 619 KQRRKQILFPEKSEDFRENIFQYDDEGGGEEDTEAFDIAELRSSTIMRERKTRKTTSAEI 678
Query: 276 YGLGPMPMGVEPNVGIF---IEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
L + V P+ IF I E + A+ DP APPFD L+ YA+EG GS AGSLSSL S
Sbjct: 679 RSLYRQSLQVGPDSAIFRKFILEKLEEANTDPCAPPFDSLQTYAFEGTGSLAGSLSSLES 738
Query: 333 GSS 335
S
Sbjct: 739 AVS 741
>sp|P70407|CADH9_MOUSE Cadherin-9 OS=Mus musculus GN=Cdh9 PE=2 SV=2
Length = 786
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 18/152 (11%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPG--PDDDVRENIINYDDEGGGED 249
+ TG+ + + L + L+++F R+R+ K P DDVR+NI+ Y+DEGGGE+
Sbjct: 610 LSTGALIAILLCVVILLTLIVLFAALKRQRK---KEPLIISKDDVRDNIVTYNDEGGGEE 666
Query: 250 DMTAFDITPLQIPIGGPHPEMNNKIPYGLGP---------MPMGVEPNVGIFIEEHKKRA 300
D AFDI L+ P ++K+ + P +P+ +V FI K
Sbjct: 667 DTQAFDIGTLR----NPEAREDSKLRRDVMPETIFQIRRTVPLWENIDVQDFIHRRLKEN 722
Query: 301 DADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
D+DP+APP+D L YAYEG S A SLSSL S
Sbjct: 723 DSDPSAPPYDSLATYAYEGNDSVANSLSSLES 754
>sp|Q5RJH3|CAD12_MOUSE Cadherin-12 OS=Mus musculus GN=Cdh12 PE=2 SV=1
Length = 794
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPGPDDDVRENIINYDDEGGGEDDM 251
+ TG+ + + L + +V+++V R+R+ +D+R+N+I+YDDEGGGE+D
Sbjct: 612 LSTGALIAILLCMVILLAIVVLYVALRRQRKKDTLMTS-KEDIRDNVIHYDDEGGGEEDT 670
Query: 252 TAFDITPLQIPIGGPHPEMNNKIPYGLGPMPM-------GVEPNVGI--FIEEHKKRADA 302
AFDI L+ P NKI + P + VE N I FI + DA
Sbjct: 671 QAFDIGALR----NPKVIEENKIRRDIKPDSLCLSRQRPQVEDNTDIRDFIHRRLQENDA 726
Query: 303 DPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
DP APP+D L YAYEG GS A SLSS+ S
Sbjct: 727 DPAAPPYDSLATYAYEGNGSVAESLSSIDS 756
>sp|P55289|CAD12_HUMAN Cadherin-12 OS=Homo sapiens GN=CDH12 PE=2 SV=2
Length = 794
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPGPDDDVRENIINYDDEGGGEDDM 251
+ TG+ + + L I +V+++V R+++ +D+R+N+I+YDDEGGGE+D
Sbjct: 612 LSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTS-KEDIRDNVIHYDDEGGGEEDT 670
Query: 252 TAFDITPLQIPIGGPHPEMNNKIPYGLGP---------MPMGVEPNVGIFIEEHKKRADA 302
AFDI L+ P NKI + P PM ++ FI + + D
Sbjct: 671 QAFDIGALR----NPKVIEENKIRRDIKPDSLCLPRQRPPMEDNTDIRDFIHQRLQENDV 726
Query: 303 DPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
DP APP+D L YAYEG GS A SLSS+ S
Sbjct: 727 DPTAPPYDSLATYAYEGSGSVAESLSSIDS 756
>sp|P24503|CADH4_CHICK Cadherin-4 OS=Gallus gallus GN=CDH4 PE=2 SV=1
Length = 913
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 78/134 (58%), Gaps = 21/134 (15%)
Query: 210 LVLVFVVYSRRREA--HIK--YPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGG 265
+VL+FVV+ +RRE H K P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 745 MVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQPETM 803
Query: 266 PHPEMNNKIP--YGLGPMPMGVEP------------NVGIFIEEHKKRADADPNAPPFDD 311
H + NK P + P+G EP ++G FI E + AD DP APP+D
Sbjct: 804 DH--VLNKAPGVRRVDERPIGAEPQYPIRPVIPHPGDIGDFINEGLRAADNDPTAPPYDS 861
Query: 312 LRNYAYEGGGSTAG 325
L + YEG GSTAG
Sbjct: 862 LLVFDYEGSGSTAG 875
>sp|P39038|CADH4_MOUSE Cadherin-4 OS=Mus musculus GN=Cdh4 PE=2 SV=1
Length = 913
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 17/148 (11%)
Query: 194 TGSALFVTLLISPNQVLVLVFVVYSRRREA--HIK--YPGPDDDVRENIINYDDEGGGED 249
TG+ + + + I ++VL+FVV+ +RRE H K P+DDVR+NI+ YD+EGGGE+
Sbjct: 729 TGAIVAILICIVILLIMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEE 788
Query: 250 DMTAFDITPLQIPIGGPHPEMNNKIPYGLGPMPMGVEP------------NVGIFIEEHK 297
D +D++ LQ P H + P+G EP ++G FI E
Sbjct: 789 DQD-YDLSQLQQPEAMEHVLSKTPGVRRVDERPVGAEPQYPVRPVVPHPGDIGDFINEGL 847
Query: 298 KRADADPNAPPFDDLRNYAYEGGGSTAG 325
+ AD DP APP+D L + YEG GSTAG
Sbjct: 848 RAADNDPTAPPYDSLLVFDYEGSGSTAG 875
>sp|P97291|CADH8_MOUSE Cadherin-8 OS=Mus musculus GN=Cdh8 PE=1 SV=2
Length = 799
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 231 DDDVRENIINYDDEGGGEDDMTAFDITPLQIPIG--------GPHPEMNNKIPYGLGPMP 282
D+DVRENII YDDEGGGE+D AFDI LQ P G P++ GL P+P
Sbjct: 657 DEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVP 716
Query: 283 MGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAG 325
GV+ V FI AD DP APP+D ++ Y YEG GS AG
Sbjct: 717 NGVD--VDEFINVRLHEADNDPTAPPYDSIQIYGYEGRGSVAG 757
>sp|P55283|CADH4_HUMAN Cadherin-4 OS=Homo sapiens GN=CDH4 PE=2 SV=2
Length = 916
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 194 TGSALFVTLLISPNQVLVLVFVVYSRRREA--HIK--YPGPDDDVRENIINYDDEGGGED 249
TG+ + + + I +VL+FV++ +RRE H K P+DDVR+NI+ YD+EGGGE+
Sbjct: 732 TGAIVAILICILILLTMVLLFVMWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEE 791
Query: 250 DMTAFDITPLQ-------IPIGGPHPEMNNKIPYGLGPM----PMGVEP-NVGIFIEEHK 297
D +D++ LQ +P P ++ P G P PM P ++G FI E
Sbjct: 792 DQD-YDLSQLQQPEAMGHVPSKAPGVRRVDERPVGAEPQYPIRPMVPHPGDIGDFINEGL 850
Query: 298 KRADADPNAPPFDDLRNYAYEGGGSTAG 325
+ AD DP APP+D L + YEG GSTAG
Sbjct: 851 RAADNDPTAPPYDSLLVFDYEGSGSTAG 878
>sp|Q3SWX5|CADH6_BOVIN Cadherin-6 OS=Bos taurus GN=CDH6 PE=2 SV=1
Length = 790
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPG--PDDDVRENIINYDDEGGGED 249
+ TG+ + + L I V V++F R+R+ K P +D+R+NI++Y+DEGGGE+
Sbjct: 611 LSTGALIAILLCIVTLLVTVVLFAALRRQRK---KEPLIISKEDIRDNIVSYNDEGGGEE 667
Query: 250 DMTAFDITPLQIPIGGPHPEMNNKI-PYGL---GPMPMGVE-PNVGIFIEEHKKRADADP 304
D AFDI L+ P ++ I P L P + +V FI + K D DP
Sbjct: 668 DTQAFDIGTLRNPEAIEDSKLRRDIVPEALFLPRRTPAARDNTDVRDFINQRLKENDTDP 727
Query: 305 NAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
APP+D L YAYEG GS A SLSSL S
Sbjct: 728 TAPPYDSLATYAYEGAGSVADSLSSLES 755
>sp|O54800|CADH8_RAT Cadherin-8 OS=Rattus norvegicus GN=Cdh8 PE=2 SV=1
Length = 799
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 231 DDDVRENIINYDDEGGGEDDMTAFDITPLQIPIG--------GPHPEMNNKIPYGLGPMP 282
D+DVRENII YDDEGGGE+D AFDI LQ P G P++ GL P+P
Sbjct: 657 DEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVP 716
Query: 283 MGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAG 325
GV+ V FI AD DP APP+D ++ Y YEG GS AG
Sbjct: 717 NGVD--VDEFINVRLHEADNDPTAPPYDSIQIYGYEGRGSVAG 757
>sp|P55285|CADH6_HUMAN Cadherin-6 OS=Homo sapiens GN=CDH6 PE=1 SV=1
Length = 790
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 18/152 (11%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPG--PDDDVRENIINYDDEGGGED 249
+ TG+ + + L I V V++F R+R+ K P +D+R+NI++Y+DEGGGE+
Sbjct: 611 LSTGALVAILLCIVILLVTVVLFAALRRQRK---KEPLIISKEDIRDNIVSYNDEGGGEE 667
Query: 250 DMTAFDITPLQIPIGGPHPEMNNKIPYGLGPMPMGV---------EPNVGIFIEEHKKRA 300
D AFDI L+ P +NK+ + P + + +V FI + K
Sbjct: 668 DTQAFDIGTLR----NPEAIEDNKLRRDIVPEALFLPRRTPTARDNTDVRDFINQRLKEN 723
Query: 301 DADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
D DP APP+D L YAYEG GS A SLSSL S
Sbjct: 724 DTDPTAPPYDSLATYAYEGTGSVADSLSSLES 755
>sp|P55286|CADH8_HUMAN Cadherin-8 OS=Homo sapiens GN=CDH8 PE=1 SV=2
Length = 799
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 231 DDDVRENIINYDDEGGGEDDMTAFDITPLQIPIG--------GPHPEMNNKIPYGLGPMP 282
D+DVRENII YDDEGGGE+D AFDI LQ P G P++ GL P+P
Sbjct: 657 DEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVP 716
Query: 283 MGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAG 325
GV+ V FI AD DP APP+D ++ Y YEG GS AG
Sbjct: 717 NGVD--VDEFINVRLHEADNDPTAPPYDSIQIYGYEGRGSVAG 757
>sp|P55280|CADH6_RAT Cadherin-6 OS=Rattus norvegicus GN=Cdh6 PE=2 SV=1
Length = 789
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPG--PDDDVRENIINYDDEGGGED 249
+ TG+ + + L I V V++F R+R+ K P +D+R+NI++Y+DEGGGE+
Sbjct: 611 LSTGALVAILLCIVILLVTVVLFAALRRQRK---KEPLIISKEDIRDNIVSYNDEGGGEE 667
Query: 250 DMTAFDITPLQIPIGGPHPEMNNKIPYGL---GPMPMGVE-PNVGIFIEEHKKRADADPN 305
D AFDI L+ P + +P L P + +V FI + ++ + DP
Sbjct: 668 DTQAFDIGTLRNPKPWRQQSRRDMVPEALFLPRRTPTARDNTDVRDFISQRLRKMNTDPT 727
Query: 306 APPFDDLRNYAYEGGGSTAGSLSSLAS 332
APP+D L YAYEG GS A SLSSL S
Sbjct: 728 APPYDSLATYAYEGTGSVADSLSSLES 754
>sp|P97326|CADH6_MOUSE Cadherin-6 OS=Mus musculus GN=Cdh6 PE=1 SV=2
Length = 790
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 192 VKTGSALFVTLLISPNQVLVLVFVVYSRRREAHIKYPG--PDDDVRENIINYDDEGGGED 249
+ TG+ + + L I V V++F R+R+ K P +D+R+NI++Y+DEGGGE+
Sbjct: 611 LSTGALVAILLCIVILLVTVVLFAALRRQRK---KEPLIISKEDIRDNIVSYNDEGGGEE 667
Query: 250 DMTAFDITPLQIPIGGPHPEMNNKI-PYGL---GPMPMGVE-PNVGIFIEEHKKRADADP 304
D AFDI L+ P + I P L P + +V FI + K D DP
Sbjct: 668 DTQAFDIGTLRNPEAMEDSKSRRDIVPEALFLPRRTPTARDNTDVRDFINQRLKENDTDP 727
Query: 305 NAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
APP+D L YAYEG GS A SLSSL S
Sbjct: 728 TAPPYDSLATYAYEGTGSVADSLSSLES 755
>sp|Q90762|CADH6_CHICK Cadherin-6 OS=Gallus gallus GN=CDH6 PE=2 SV=1
Length = 790
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 18/135 (13%)
Query: 209 VLVLVFVVYSRRREAHIKYPG--PDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGP 266
V V++F R+R+ K P +D+R+NI++Y+DEGGGE+D AFDI L+ P
Sbjct: 628 VTVVLFAALRRQRK---KEPLIISKEDIRDNIVSYNDEGGGEEDTQAFDIGTLR----NP 680
Query: 267 HPEMNNKIPYGLGP----MPMGV-----EPNVGIFIEEHKKRADADPNAPPFDDLRNYAY 317
+NK+ + P MP +V FI + K D DP APP+D L YAY
Sbjct: 681 EAIDDNKLRRDIVPETLFMPRRTATARDNTDVRDFINQRLKENDTDPAAPPYDSLATYAY 740
Query: 318 EGGGSTAGSLSSLAS 332
EG GS A SLSSL S
Sbjct: 741 EGNGSVAESLSSLES 755
>sp|Q9ULB4|CADH9_HUMAN Cadherin-9 OS=Homo sapiens GN=CDH9 PE=2 SV=2
Length = 789
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 13/110 (11%)
Query: 232 DDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHPEMNNKIPYGLGP---------MP 282
DDVR+NI+ Y+DEGGGE+D AFDI L+ P ++K+ + P +P
Sbjct: 650 DDVRDNIVTYNDEGGGEEDTQAFDIGTLR----NPEAREDSKLRRDVMPETIFQIRRTVP 705
Query: 283 MGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
+ +V FI K DADP+APP+D L YAYEG S A SLSSL S
Sbjct: 706 LWENIDVQDFIHRRLKENDADPSAPPYDSLATYAYEGNDSIADSLSSLES 755
>sp|P70408|CAD10_MOUSE Cadherin-10 OS=Mus musculus GN=Cdh10 PE=2 SV=3
Length = 788
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 232 DDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHPEMNNKI-PYGLG-PMPMGVEPN- 288
+D+R+NI++Y+DEGGGE+D AFDI L+ P ++ I P L P P+
Sbjct: 648 EDIRDNIVSYNDEGGGEEDTQAFDIGTLRNPAAIEEKKLRRDIIPETLFIPRRTPTAPDN 707
Query: 289 --VGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
V FI E K D DP APP+D L YAYEG S A SLSSL SG++
Sbjct: 708 TDVRDFINERLKEHDLDPTAPPYDSLATYAYEGNDSVAESLSSLESGTT 756
>sp|Q9Y6N8|CAD10_HUMAN Cadherin-10 OS=Homo sapiens GN=CDH10 PE=1 SV=2
Length = 788
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 232 DDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHPEMNNKI-PYGLG-PMPMGVEPN- 288
+D+R+NI++Y+DEGGGE+D AFDI L+ P ++ I P L P P+
Sbjct: 648 EDIRDNIVSYNDEGGGEEDTQAFDIGTLRNPAAIEEKKLRRDIIPETLFIPRRTPTAPDN 707
Query: 289 --VGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
V FI E K D DP APP+D L YAYEG S A SLSSL SG++
Sbjct: 708 TDVRDFINERLKEHDLDPTAPPYDSLATYAYEGNDSIAESLSSLESGTT 756
>sp|P79995|CAD10_CHICK Cadherin-10 OS=Gallus gallus GN=CDH10 PE=2 SV=1
Length = 789
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 232 DDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHPEMNNKI-PYGL-GPMPMGVEPN- 288
+D+R+NI++Y+DEGGGE+D AFDI L+ P ++ I P L P P+
Sbjct: 648 EDIRDNIVSYNDEGGGEEDTQAFDIGTLRNPAAIEDKKLRRDIIPETLFVPRRTPSAPDN 707
Query: 289 --VGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
V FI + K D+DP+APP+D L YAYEG S A SLSSL SG++
Sbjct: 708 TDVRDFINQRLKEHDSDPSAPPYDSLATYAYEGNDSIAESLSSLESGTT 756
>sp|P79883|CADH4_XENLA Cadherin-4 OS=Xenopus laevis GN=cdh4 PE=2 SV=1
Length = 922
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 21/134 (15%)
Query: 210 LVLVFVVYSRRREA--HIK--YPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGG 265
+VL+FV++ +RRE H K P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 754 MVLLFVMWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQPETL 812
Query: 266 PHPEMNNKIP--YGLGPMPMGVE------------PNVGIFIEEHKKRADADPNAPPFDD 311
H + NK+ + P+G E ++G FI E + AD DP APP+D
Sbjct: 813 DH--VLNKVAGVRRVDERPVGAEHQYPIRPVIPHPGDIGDFITEGLRAADNDPTAPPYDS 870
Query: 312 LRNYAYEGGGSTAG 325
L + YEG GSTAG
Sbjct: 871 LLVFDYEGSGSTAG 884
>sp|P55291|CAD15_HUMAN Cadherin-15 OS=Homo sapiens GN=CDH15 PE=1 SV=1
Length = 814
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 229 GPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIG----GPHPEMNNKIPYG-LGPMPM 283
GP DD+R+N++NYD++GGGE+D A+DI+ L+ P P + P G L P P
Sbjct: 642 GPQDDLRDNVLNYDEQGGGEEDQDAYDISQLRHPTALSLPLGPPPLRRDAPQGRLHPQPP 701
Query: 284 GVEP----NVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
V P ++ FI + + AD+DP+ PP+D Y YEG GS AG+LSS+ S
Sbjct: 702 RVLPTSPLDIADFINDGLEAADSDPSVPPYDTALIYDYEGDGSVAGTLSSILS 754
>sp|P33146|CAD15_MOUSE Cadherin-15 OS=Mus musculus GN=Cdh15 PE=1 SV=3
Length = 784
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 229 GPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPI-------GGPHPEMNNKIPYGLGPM 281
G +D+R+NI+NYD++GGGE+D A+DI L+ P+ P + P+ P
Sbjct: 641 GLQEDLRDNILNYDEQGGGEEDQDAYDINQLRHPVEPRATSRSLGRPPLRRDAPFSYVPQ 700
Query: 282 PMGVEP----NVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLAS 332
P V P ++ FI + + AD+DP+ PP+D Y YEG GS AG+LSS+ S
Sbjct: 701 PHRVLPTSPSDIANFISDGLEAADSDPSVPPYDTALIYDYEGDGSVAGTLSSILS 755
>sp|Q90275|CADH2_DANRE Cadherin-2 OS=Danio rerio GN=cdh2 PE=2 SV=2
Length = 893
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FV++ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P P
Sbjct: 728 MFVMWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP-DTLEP 785
Query: 269 EMNNKIPYG---LGPMPMGVEPN------------VGIFIEEHKKRADADPNAPPFDDLR 313
+M P G L PM EPN +G FI E K AD DP APP+D L
Sbjct: 786 DMIK--PVGIRRLDERPMHSEPNYPIRSAAPHPGDIGEFIHEGLKAADTDPTAPPYDSLL 843
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 844 VFDYEGSGSTA 854
>sp|P33147|CADHO_XENLA Neural cadherin-2 OS=Xenopus laevis PE=2 SV=1
Length = 906
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYGLGPM---PMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G+ M P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDTIKPVGIRRMDERPIHAEPQYPIRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
>sp|Q8BM92|CADH7_MOUSE Cadherin-7 OS=Mus musculus GN=Cdh7 PE=2 SV=1
Length = 785
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 219 RRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQ----IPIGGPHPEMNNKI 274
RRR+ + D+RENI+ YDDEGGGE+D AFD+ L+ I ++ +I
Sbjct: 631 RRRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNAIRDSKTRRDVTPEI 690
Query: 275 PYGLGPMPMGVEPNVGI--FIEEHKKRADADPNAPPFDDLRNYAYEGGGSTA 324
+ P + NV FI E K AD DP APP+D L+ YA+EG GS A
Sbjct: 691 QFLSRPTFKNIPDNVIFREFIWERLKEADVDPGAPPYDSLQTYAFEGNGSVA 742
>sp|Q9Z0M3|CAD20_MOUSE Cadherin-20 OS=Mus musculus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 218 SRRREAHIKYP---GPDDDVRENIINYDDEGGGEDDMTAFDIT----PLQIPIGGPHPEM 270
S RR H K P D+++ ENI+ YDDEGGGE+D AFDI P + G
Sbjct: 641 SMRR--HRKQPYIIDDDENIHENIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTR 698
Query: 271 NNKIP-----YGLGPMPMGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAG 325
+ +P P V V ++ AD D APPFD L+ Y +EG GS AG
Sbjct: 699 QDMLPEIESLSRYVPQTCAVSSTVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAG 758
Query: 326 SLSSLASGSS 335
SLSSL S +S
Sbjct: 759 SLSSLQSATS 768
>sp|P20310|CADHN_XENLA Neural cadherin-1 OS=Xenopus laevis PE=2 SV=1
Length = 905
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 740 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTM 795
Query: 269 EMNNKIPYGLGPM---PMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G+ M P+ EP ++G FI E K AD DP APP+D L
Sbjct: 796 EPDTIKPVGIRRMDERPIHAEPQYPIRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 855
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 856 VFDYEGSGSTA 866
>sp|Q9ULB5|CADH7_HUMAN Cadherin-7 OS=Homo sapiens GN=CDH7 PE=2 SV=2
Length = 785
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 219 RRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQ----IPIGGPHPEMNNKI 274
RRR+ + D+RENI+ YDDEGGGE+D AFD+ L+ I ++ +I
Sbjct: 631 RRRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNVIRDTKTRRDVTPEI 690
Query: 275 PYGLGPMPMGVEPNVGI--FIEEHKKRADADPNAPPFDDLRNYAYEGGGSTA 324
+ P + NV FI E K AD DP APP+D L+ YA+EG GS A
Sbjct: 691 QFLSRPAFKSIPDNVIFREFIWERLKEADVDPGAPPYDSLQTYAFEGNGSVA 742
>sp|Q5DWV2|CADH7_RAT Cadherin-7 OS=Rattus norvegicus GN=Cdh7 PE=2 SV=1
Length = 785
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 233 DVRENIINYDDEGGGEDDMTAFDITPLQ----IPIGGPHPEMNNKIPYGLGPMPMGVEPN 288
D+RENI+ YDDEGGGE+D AFD+ L+ + ++ +I + P + N
Sbjct: 645 DIRENIVRYDDEGGGEEDTEAFDMAALRNLNVVRDTKTRRDVTPEIQFLSRPTFKNIPDN 704
Query: 289 VGI--FIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSL 327
V FI E K AD DP APP+D L+ YA+EG GS A SL
Sbjct: 705 VIFREFIWERLKEADVDPGAPPYDSLQTYAFEGNGSVAESL 745
>sp|Q6R8F2|CADH1_BOVIN Cadherin-1 OS=Bos taurus GN=CDH1 PE=2 SV=1
Length = 882
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 230 PDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGG-PHPEMNNKIPYGLG-----PMPM 283
P+DD R+N+ YD+EGGGE+D FD++ L + P N+ P + P P
Sbjct: 744 PEDDTRDNVYYYDEEGGGEEDQD-FDLSQLHRGLDARPEVTRNDVAPTLMSVPQYRPRPA 802
Query: 284 GVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
+ +G FI+E+ K AD+DP APP+D L + YEG GS A +LSSL S S
Sbjct: 803 NPD-EIGNFIDENLKAADSDPTAPPYDSLLVFDYEGSGSEAATLSSLNSSES 853
>sp|Q5DWV1|CAD20_RAT Cadherin-20 OS=Rattus norvegicus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 231 DDDVRENIINYDDEGGGEDDMTAFDIT----PLQIPIGGPHPEMNNKIP-----YGLGPM 281
D+++ ENI+ YDDEGGGE+D AFDI P + G + +P P
Sbjct: 655 DENIHENIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTRQDMLPEIESLSRYVPQ 714
Query: 282 PMGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASGSS 335
V V ++ AD D APPFD L+ Y +EG GS AGSLSSL S +S
Sbjct: 715 TCAVSSTVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATS 768
>sp|Q5R9X1|CADH2_PONAB Cadherin-2 OS=Pongo abelii GN=CDH2 PE=2 SV=1
Length = 906
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYGLGPM---PMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G+ M P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDAIKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
>sp|Q63315|CAD22_RAT Cadherin-22 OS=Rattus norvegicus GN=Cdh22 PE=1 SV=1
Length = 813
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 17/122 (13%)
Query: 231 DDDVRENIINYDDEGGGEDDMTAFDITPLQI-----------PIGG---PHPEMNNKIPY 276
D+D+R+N+I Y+DEGGGE D A+D++ L+ P GG P ++ +
Sbjct: 657 DEDMRDNVIKYNDEGGGEQDTEAYDMSALRSLYDFGELKGGDPGGGAASPPQAASSSERH 716
Query: 277 GLGPMPMGVEPNVGIF---IEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASG 333
L P EP+ +F I ADAD + PP+D + YA+EG GS A SLSSL SG
Sbjct: 717 SLPRGPSSPEPDFSVFRDFISRKVALADADLSVPPYDAFQTYAFEGAGSPAASLSSLHSG 776
Query: 334 SS 335
S+
Sbjct: 777 ST 778
>sp|Q9WTP5|CAD22_MOUSE Cadherin-22 OS=Mus musculus GN=Cdh22 PE=2 SV=1
Length = 813
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 17/122 (13%)
Query: 231 DDDVRENIINYDDEGGGEDDMTAFDITPLQI-----------PIGG---PHPEMNNKIPY 276
D+D+R+N+I Y+DEGGGE D A+D++ L+ P GG P ++ +
Sbjct: 657 DEDMRDNVIKYNDEGGGEQDTEAYDMSALRSLYDFGELKGGDPGGGAASPPQAASSSERH 716
Query: 277 GLGPMPMGVEPNVGIF---IEEHKKRADADPNAPPFDDLRNYAYEGGGSTAGSLSSLASG 333
L P EP+ +F I ADAD + PP+D + YA+EG GS A SLSSL SG
Sbjct: 717 SLPRGPSSPEPDFSVFRDFISRKVALADADLSVPPYDAFQTYAFEGAGSPAASLSSLHSG 776
Query: 334 SS 335
S+
Sbjct: 777 ST 778
>sp|P19022|CADH2_HUMAN Cadherin-2 OS=Homo sapiens GN=CDH2 PE=1 SV=4
Length = 906
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYGLGPM---PMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G+ M P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDAIKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
>sp|B0KW95|CADH2_CALJA Cadherin-2 OS=Callithrix jacchus GN=CDH2 PE=3 SV=1
Length = 906
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYGLGPM---PMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G+ M P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDAIKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
>sp|Q90763|CADH7_CHICK Cadherin-7 OS=Gallus gallus GN=CDH7 PE=2 SV=1
Length = 785
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 219 RRREAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQ----IPIGGPHPEMNNKI 274
RRR+ + D+RENI+ YDDEGGGE+D AFD+ L+ I ++ +I
Sbjct: 631 RRRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNIIRDTKTRRDVTPEI 690
Query: 275 PYGLGPMPMGVEPNVGI--FIEEHKKRADADPNAPPFDDLRNYAYEGGGSTA 324
+ P + NV FI E K AD DP APP+D L+ YA+EG GS A
Sbjct: 691 QFLSRPTFKSIPDNVIFREFIWERLKEADVDPCAPPYDSLQTYAFEGNGSVA 742
>sp|Q9HBT6|CAD20_HUMAN Cadherin-20 OS=Homo sapiens GN=CDH20 PE=2 SV=2
Length = 801
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 218 SRRREAHIKYPGPDDD---VRENIINYDDEGGGEDDMTAFDIT----PLQIPIGGPHPEM 270
S RR H K P DD + ENI+ YDDEGGGE+D AFDI P + G
Sbjct: 641 SMRR--HRKQPYIIDDEENIHENIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTR 698
Query: 271 NNKIP-----YGLGPMPMGVEPNVGIFIEEHKKRADADPNAPPFDDLRNYAYEGGGSTAG 325
+ +P P V V ++ AD D APPFD L+ Y +EG GS AG
Sbjct: 699 QDMLPEIESLSRYVPQTCAVNSTVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAG 758
Query: 326 SLSSLASGSS 335
SLSSL S +S
Sbjct: 759 SLSSLQSATS 768
>sp|B4USZ0|CADH2_OTOGA Cadherin-2 OS=Otolemur garnettii GN=CDH2 PE=3 SV=1
Length = 906
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYG---LGPMPMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G L P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
>sp|P10288|CADH2_CHICK Cadherin-2 OS=Gallus gallus GN=CDH2 PE=1 SV=1
Length = 912
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 747 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 802
Query: 269 EMNNKIPYG---LGPMPMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G L P+ EP ++G FI E K AD DP APP+D L
Sbjct: 803 EPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 862
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 863 VFDYEGSGSTA 873
>sp|P19534|CADH2_BOVIN Cadherin-2 (Fragment) OS=Bos taurus GN=CDH2 PE=2 SV=1
Length = 877
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 712 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 767
Query: 269 EMNNKIPYG---LGPMPMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G L P+ EP ++G FI E K AD DP APP+D L
Sbjct: 768 EPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 827
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 828 VFDYEGSGSTA 838
>sp|P15116|CADH2_MOUSE Cadherin-2 OS=Mus musculus GN=Cdh2 PE=1 SV=2
Length = 906
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYG---LGPMPMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G L P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
>sp|Q9Z1Y3|CADH2_RAT Cadherin-2 OS=Rattus norvegicus GN=Cdh2 PE=1 SV=1
Length = 906
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
Query: 213 VFVVYSRRR----EAHIKYPGPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPHP 268
+FVV+ +RR +A P+DDVR+NI+ YD+EGGGE+D +D++ LQ P
Sbjct: 741 MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQD-YDLSQLQQP---DTV 796
Query: 269 EMNNKIPYG---LGPMPMGVEP------------NVGIFIEEHKKRADADPNAPPFDDLR 313
E + P G L P+ EP ++G FI E K AD DP APP+D L
Sbjct: 797 EPDAIKPVGIRRLDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL 856
Query: 314 NYAYEGGGSTA 324
+ YEG GSTA
Sbjct: 857 VFDYEGSGSTA 867
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,939,110
Number of Sequences: 539616
Number of extensions: 6788164
Number of successful extensions: 15505
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 14292
Number of HSP's gapped (non-prelim): 1210
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)