Query psy5923
Match_columns 88
No_of_seqs 103 out of 168
Neff 3.9
Searched_HMMs 46136
Date Fri Aug 16 21:55:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3865|consensus 100.0 7E-41 1.5E-45 268.1 3.6 80 8-88 30-115 (402)
2 cd01515 Arch_FBPase_1 Archaeal 73.1 1.4 3.1E-05 32.8 0.5 47 10-60 80-128 (257)
3 PRK12676 bifunctional inositol 72.0 1.5 3.3E-05 32.7 0.5 48 10-61 85-132 (263)
4 cd01641 Bacterial_IMPase_like_ 67.7 2.4 5.2E-05 31.3 0.8 46 11-60 77-122 (248)
5 PF00339 Arrestin_N: Arrestin 60.9 42 0.00092 21.6 5.7 43 12-54 16-59 (149)
6 PF13196 DUF4012: Protein of u 59.8 3.7 8E-05 29.5 0.5 15 12-26 99-113 (144)
7 cd01639 IMPase IMPase, inosito 59.0 3.2 6.9E-05 30.3 0.0 46 11-60 80-125 (244)
8 TIGR01331 bisphos_cysQ 3'(2'), 55.9 3.8 8.2E-05 30.3 -0.0 46 10-59 80-125 (249)
9 PRK10931 adenosine-3'(2'),5'-b 55.4 4.1 9E-05 30.1 0.1 46 11-60 82-127 (246)
10 cd01517 PAP_phosphatase PAP-ph 52.4 6.9 0.00015 29.3 0.9 45 11-60 77-128 (274)
11 COG1140 NarY Nitrate reductase 50.7 16 0.00035 31.4 2.9 31 14-44 205-251 (513)
12 PRK10757 inositol monophosphat 50.3 5.7 0.00012 29.8 0.2 45 11-59 83-127 (267)
13 COG0483 SuhB Archaeal fructose 49.5 6.9 0.00015 29.7 0.5 46 11-60 84-129 (260)
14 PF00459 Inositol_P: Inositol 45.2 3.5 7.6E-05 30.4 -1.6 47 10-60 88-134 (270)
15 PLN02911 inositol-phosphate ph 45.1 7.4 0.00016 30.0 0.1 47 10-60 113-159 (296)
16 TIGR02067 his_9_proposed histi 44.0 7.7 0.00017 28.7 0.0 46 11-60 79-124 (251)
17 PF12762 DDE_Tnp_IS1595: ISXO2 42.3 16 0.00036 24.6 1.5 17 13-29 1-17 (151)
18 PF09961 DUF2195: Uncharacteri 41.9 20 0.00043 25.7 1.9 21 17-37 98-118 (121)
19 cd01643 Bacterial_IMPase_like_ 41.9 8.4 0.00018 28.5 -0.1 45 11-59 76-120 (242)
20 PLN02553 inositol-phosphate ph 41.0 9.1 0.0002 28.6 0.0 47 10-60 89-135 (270)
21 cd01638 CysQ CysQ, a 3'-Phosph 37.8 8.7 0.00019 28.1 -0.5 46 11-60 79-124 (242)
22 cd01637 IMPase_like Inositol-m 34.3 14 0.0003 26.7 0.1 46 10-59 78-123 (238)
23 KOG1577|consensus 32.8 11 0.00023 30.4 -0.8 36 31-67 42-85 (300)
24 PLN02373 soluble inorganic pyr 31.7 80 0.0017 23.7 3.8 49 4-53 69-120 (188)
25 PF14385 DUF4416: Domain of un 30.5 60 0.0013 23.9 2.9 16 27-42 122-137 (164)
26 TIGR01330 bisphos_HAL2 3'(2'), 28.2 31 0.00067 27.7 1.1 37 11-52 135-171 (353)
27 PF04378 RsmJ: Ribosomal RNA s 26.9 31 0.00067 26.8 0.9 27 15-41 126-165 (245)
28 PRK01250 inorganic pyrophospha 25.7 1.1E+02 0.0024 22.6 3.6 48 4-52 61-111 (176)
29 PRK00642 inorganic pyrophospha 24.5 1.2E+02 0.0025 23.1 3.6 43 11-53 93-139 (205)
30 PF12473 DUF3694: Kinesin prot 23.5 62 0.0013 22.4 1.8 44 18-67 95-138 (140)
31 cd01642 Arch_FBPase_2 Putative 23.5 51 0.0011 24.6 1.5 28 10-41 78-105 (244)
32 cd01636 FIG FIG, FBPase/IMPase 22.8 29 0.00062 24.1 0.0 25 10-38 82-106 (184)
33 PRK02230 inorganic pyrophospha 22.6 1.3E+02 0.0029 22.6 3.6 48 4-52 49-99 (184)
34 KOG1069|consensus 21.5 60 0.0013 25.4 1.6 35 7-41 131-165 (217)
35 COG3350 Uncharacterized conser 21.4 41 0.00089 21.0 0.5 15 9-24 2-16 (53)
36 PF06299 DUF1045: Protein of u 20.8 67 0.0014 23.6 1.6 18 71-88 84-104 (160)
37 cd07998 WGR_DNA_ligase WGR dom 20.7 1.1E+02 0.0023 20.1 2.4 18 28-45 13-39 (77)
No 1
>KOG3865|consensus
Probab=100.00 E-value=7e-41 Score=268.08 Aligned_cols=80 Identities=44% Similarity=0.799 Sum_probs=75.7
Q ss_pred CCCCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhhcccccCCCCCCCCCCHHHHhhhc----
Q psy5923 8 ETFPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQTQNSQ---- 83 (88)
Q Consensus 8 ~~~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t~QvyP~~~~~~~~lT~lQe~LlK---- 83 (88)
+|.||||||||+|||||+|+|||||||+|||||||||+|||||+||||||+++.|+|||.+ .+.+||+|||||+|
T Consensus 30 vd~vdPvDGvVlvDpeYlK~RKvfv~L~caFRYGREDldVlGLtFrKdL~~~~~Qv~Pp~~-~~~plT~lQErLlkKLG~ 108 (402)
T KOG3865|consen 30 VDQVDPVDGVVLVDPEYLKDRKVFVQLTCAFRYGREDLDVLGLTFRKDLYLATVQVYPPPE-DSRPLTRLQERLLKKLGS 108 (402)
T ss_pred cccccccceeEEEChHHhccceEEEEEEeeeecccccceeeeeEEEeeeEEEEEEeeCCCc-CCCcccHHHHHHHHHhCC
Confidence 6789999999999999999999999999999999999999999999999999999999843 55679999999999
Q ss_pred --CCcCC
Q psy5923 84 --HPVWV 88 (88)
Q Consensus 84 --~p~~~ 88 (88)
|||||
T Consensus 109 nAyPF~f 115 (402)
T KOG3865|consen 109 NAYPFTF 115 (402)
T ss_pred CCCceEE
Confidence 99986
No 2
>cd01515 Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV). These are Mg++ dependent phosphatases. Members in this family may have both fructose-1,6-bisphosphatase and inositol-monophosphatase activity. In hyperthermophilic archaea, inositol monophosphatase is thought to play a role in the biosynthesis of di-myo-inositol-1,1'-phosphate, an osmolyte unique to hyperthermophiles.
Probab=73.07 E-value=1.4 Score=32.83 Aligned_cols=47 Identities=19% Similarity=0.161 Sum_probs=35.7
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeecc--ccccccccchhhHhhhhh
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGR--EEDEILGLNFQKELYLAS 60 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGR--ED~dVmGL~FrKdl~l~t 60 (88)
.|||||| -..+++|.-.|+..+|..+-|+ -..=|+-..+..++|.+.
T Consensus 80 vIDPIDG----T~nfv~g~p~~~isial~~~g~~~p~~gvv~~P~~~~~~~a~ 128 (257)
T cd01515 80 VLDPLDG----TYNAINGIPFYSVSVAVFKIDKSDPYYGYVYNLATGDLYYAI 128 (257)
T ss_pred EEeCcCC----hhHHhcCCCceEEEEEEEeCCCCCeEEEEEEecCCCCeEEEE
Confidence 3788888 3488899999999999999988 555566667777777643
No 3
>PRK12676 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed
Probab=71.99 E-value=1.5 Score=32.75 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=36.4
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhhc
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASE 61 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t~ 61 (88)
.||||||= ..|++|.-.|+..++.++-|+-..=|+-..+..++|.+..
T Consensus 85 vIDPiDGT----~nfv~g~p~~~vsial~~~g~p~~gvV~~P~~~e~~~A~~ 132 (263)
T PRK12676 85 VLDPLDGT----YNAINGIPFYAISIAVFKGGKPVYGYVYNLATGDFYEAIP 132 (263)
T ss_pred EEeccCCc----hHHhcCCCceEEEEEEEECCeEEEEEEEecCCCCEEEEEC
Confidence 37888883 3889999999988888877766666666778888877553
No 4
>cd01641 Bacterial_IMPase_like_1 Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates.
Probab=67.71 E-value=2.4 Score=31.28 Aligned_cols=46 Identities=17% Similarity=0.343 Sum_probs=34.7
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
||||||= ..+++|.--|...++.++=|+--.=|+-..+.+++|.+.
T Consensus 77 iDPIDGT----~nf~~g~p~~~vsial~~~g~p~~gvV~~P~~~~~~~A~ 122 (248)
T cd01641 77 LDPIDGT----KSFIRGLPVWGTLIALLHDGRPVLGVIDQPALGERWIGA 122 (248)
T ss_pred EecCcCc----hhHhcCCCceEEEEEEEECCEEEEEEEccCccCCEEEEe
Confidence 8999993 488899888987777777666666667777777777653
No 5
>PF00339 Arrestin_N: Arrestin (or S-antigen), N-terminal domain; InterPro: IPR011021 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli. The receptors relay the information encoded by the ligand through the activation of heterotrimeric G proteins and intracellular effector molecules. To ensure the appropriate regulation of the signalling cascade, it is vital to properly inactivate the receptor. This inactivation is achieved, in part, by the binding of a soluble protein, arrestin, which uncouples the receptor from the downstream G protein after the receptors are phosphorylated by G protein-coupled receptor kinases. In addition to the inactivation of G protein-coupled receptors, arrestins have also been implicated in the endocytosis of receptors and cross talk with other signalling pathways. Arrestin (retinal S-antigen) is a major protein of the retinal rod outer segments. It interacts with photo-activated phosphorylated rhodopsin, inhibiting or 'arresting' its ability to interact with transducin []. The protein binds calcium, and shows similarity in its C terminus to alpha-transducin and other purine nucleotide-binding proteins. In mammals, arrestin is associated with autoimmune uveitis. Arrestins comprise a family of closely-related proteins that includes beta-arrestin-1 and -2, which regulate the function of beta-adrenergic receptors by binding to their phosphorylated forms, impairing their capacity to activate G(S) proteins; Cone photoreceptors C-arrestin (arrestin-X) [], which could bind to phosphorylated red/green opsins; and Drosophila phosrestins I and II, which undergo light-induced phosphorylation, and probably play a role in photoreceptor transduction [, , ]. The crystal structure of bovine retinal arrestin comprises two domains of antiparallel beta-sheets connected through a hinge region and one short alpha-helix on the back of the amino-terminal fold []. The binding region for phosphorylated light-activated rhodopsin is located at the N-terminal domain, as indicated by the docking of the photoreceptor to the three-dimensional structure of arrestin. The N-terminal domain consists of an immunoglobulin-like beta-sandwich structure. This entry represents proteins with immunoglobulin-like domains that are similar to those found in arrestin.; PDB: 1SUJ_A 3UGX_A 1CF1_B 1AYR_A 3UGU_A 3P2D_B 1ZSH_A 2WTR_B 3GC3_A 1G4R_A ....
Probab=60.88 E-value=42 Score=21.63 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=33.8
Q ss_pred cccccEEEecccc-ccceeEEEEEeeeeeeccccccccccchhh
Q psy5923 12 MELDGVVVFEEDY-IQDRKVFGQVVCSFRYGREEDEILGLNFQK 54 (88)
Q Consensus 12 dpVDGVVlvDpey-lk~rKVfvql~caFRYGRED~dVmGL~FrK 54 (88)
|.|.|.|++.... ++-+.|.+++.+..+..-.+..-.+.++++
T Consensus 16 e~I~G~V~l~~~~~~~i~~i~v~l~G~~~~~~~~~~~~~~~~~~ 59 (149)
T PF00339_consen 16 EVISGKVVLELSKPIKIKSIKVRLKGRAKTKWSESKSSGSTFRK 59 (149)
T ss_dssp --EEEEEEECTTT-TTTSEEEEEEEEEEEESSSSTTSTTCEEEE
T ss_pred CEEEEEEEEEECCccceeEEEEEEEEEEEEEecCCCcceeeeee
Confidence 8899999997655 567999999999999988877777777655
No 6
>PF13196 DUF4012: Protein of unknown function (DUF4012)
Probab=59.79 E-value=3.7 Score=29.46 Aligned_cols=15 Identities=20% Similarity=0.430 Sum_probs=13.4
Q ss_pred cccccEEEecccccc
Q psy5923 12 MELDGVVVFEEDYIQ 26 (88)
Q Consensus 12 dpVDGVVlvDpeylk 26 (88)
.+|||||.|||..|+
T Consensus 99 ~~vDGViavDPv~L~ 113 (144)
T PF13196_consen 99 QRVDGVIAVDPVALS 113 (144)
T ss_pred CCccEEEEECHHHHH
Confidence 489999999999886
No 7
>cd01639 IMPase IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.
Probab=58.99 E-value=3.2 Score=30.34 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=34.3
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
||||||= ..+++|.-.|+..++.++-|+--.=|+-..+.+++|.+.
T Consensus 80 IDPIDGT----~nf~~g~p~~~vsial~~~g~p~~gvV~~P~~~~~~~a~ 125 (244)
T cd01639 80 IDPLDGT----TNFVHGFPHFAVSIALAVKGEPVVGVVYDPIRNELFTAV 125 (244)
T ss_pred EecccCh----hHHhcCCCcEEEEEEEEECCEEEEEEEEeCCCCcEEEEE
Confidence 8899983 488999999998888887776555566666677766543
No 8
>TIGR01331 bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase, bacterial. Sulfate is incorporated into 3-phosphoadenylylsulfate, PAPS, for utilization in pathways such as methionine biosynthesis. Transfer of sulfate from PAPS to an acceptor leaves adenosine 3'-5'-bisphosphate, APS. This model describes a form found in bacteria of the enzyme 3'(2'),5'-bisphosphate nucleotidase, which removes the 3'-phosphate from APS to regenerate AMP and help drive the cycle.
Probab=55.88 E-value=3.8 Score=30.32 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=36.1
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhh
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLA 59 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~ 59 (88)
.||||||= ..|++|.-.|+..++.++=|+--.=|+-..+..++|.+
T Consensus 80 vIDPIDGT----~nF~~G~p~~~vsIal~~~g~pv~gvI~~P~~~~~~~A 125 (249)
T TIGR01331 80 LVDPLDGT----KEFINRNGDFTVNIALVEHGVPVLGVVYAPATGVTYFA 125 (249)
T ss_pred EEcCCcCh----HHHhcCCCcEEEEEEEEECCEEEEEEEEecCCCCEEEE
Confidence 38999994 38889989999888888887766667777777777765
No 9
>PRK10931 adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional
Probab=55.39 E-value=4.1 Score=30.07 Aligned_cols=46 Identities=17% Similarity=0.261 Sum_probs=32.5
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
||||||= ..+++|.--|+..++.++=|+-..=|+-..++.++|.+.
T Consensus 82 IDPIDGT----~nF~~g~p~~~vsIal~~~g~p~~GvV~~P~~~~~y~A~ 127 (246)
T PRK10931 82 VDPLDGT----KEFIKRNGEFTVNIALIEQGKPVLGVVYAPVMNVMYSAA 127 (246)
T ss_pred EecCcCh----HHHHcCCCCEEEEEEEEECCEEEEEEEeecCCCCEEEEE
Confidence 8999993 378888888887777777666555555566666666543
No 10
>cd01517 PAP_phosphatase PAP-phosphatase_like domains. PAP-phosphatase is a member of the inositol monophosphatase family, and catalyses the hydrolysis of 3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In Saccharomyces cerevisiae, HAL2 (MET22) is involved in methionine biosynthesis and provides increased salt tolerance when over-expressed. Bacterial members of this domain family may differ in their substrate specificity and dephosphorylate different targets, as the substrate binding site does not appear to be conserved in that sub-set.
Probab=52.42 E-value=6.9 Score=29.35 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=31.7
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccch-------hhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNF-------QKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~F-------rKdl~l~t 60 (88)
||||||= ..|++|. -|+..++-.+=|+--.=|+-..+ +.++|.+.
T Consensus 77 IDPIDGT----~nfv~g~-~~~vsIal~~~g~pv~GvI~~P~~~~~~~~~~~~~~A~ 128 (274)
T cd01517 77 LDPIDGT----KGFLRGD-QFAVALALIEDGEVVLGVIGCPNLPLDDGGGGDLFSAV 128 (274)
T ss_pred EcCCcCc----hhhhcCC-ceEEEEEEEECCEEEEEEEeCCCccccCCCCCcEEEEE
Confidence 8999993 4899999 99877777765554444555566 77777643
No 11
>COG1140 NarY Nitrate reductase beta subunit [Energy production and conversion]
Probab=50.74 E-value=16 Score=31.36 Aligned_cols=31 Identities=35% Similarity=0.615 Sum_probs=23.1
Q ss_pred cccEEEeccccccc----------eeEEEEE------eeeeeecccc
Q psy5923 14 LDGVVVFEEDYIQD----------RKVFGQV------VCSFRYGREE 44 (88)
Q Consensus 14 VDGVVlvDpeylk~----------rKVfvql------~caFRYGRED 44 (88)
=|||||||.+.-+| +|||-.- -|+|.|-|=+
T Consensus 205 EDGIVLiDQd~CRGwR~CvsgCPYKKvYfNwksgKsEKCifCyPRiE 251 (513)
T COG1140 205 EDGIVLIDQDKCRGWRMCVSGCPYKKVYFNWKSGKSEKCIFCYPRIE 251 (513)
T ss_pred cCceEEeecccccchhhhhcCCCcceeEeeccCCCcceeEEeccccc
Confidence 38999999998775 5677544 6888886643
No 12
>PRK10757 inositol monophosphatase; Provisional
Probab=50.28 E-value=5.7 Score=29.76 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=32.8
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLA 59 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~ 59 (88)
||||||= ..|++|.-.|...++.++-|+--.=|+-..+.+++|.+
T Consensus 83 IDPIDGT----~nf~~g~p~~~vsial~~~g~pv~GvV~~P~~~~~~~A 127 (267)
T PRK10757 83 IDPLDGT----TNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTA 127 (267)
T ss_pred EeCccCc----hHHHhCCCcEEEEEEEEECCEEEEEEEEcCCCCCEEEE
Confidence 8999994 38889999998777776666555556666667777665
No 13
>COG0483 SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]
Probab=49.53 E-value=6.9 Score=29.66 Aligned_cols=46 Identities=17% Similarity=0.261 Sum_probs=36.2
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
|||||| -..+++|-=.|+..+..++-|+--.=|+=-.+.+|+|.+.
T Consensus 84 IDPIDG----T~NFv~G~P~favSIa~~~~g~~~~Gvi~~P~~~e~~~A~ 129 (260)
T COG0483 84 IDPIDG----TTNFVRGIPFFAVSIALVEDGEPVAGVIYDPATGELYTAA 129 (260)
T ss_pred EcCCCC----cHHHHcCCCcceEEEEEEECCeEEEEEEeccccCceEEEe
Confidence 677777 2368899999999999999998666666667778888765
No 14
>PF00459 Inositol_P: Inositol monophosphatase family; InterPro: IPR000760 It has been shown that several proteins share two sequence motifs []. Two of these proteins, vertebrate and plant inositol monophosphatase (3.1.3.25 from EC), and vertebrate inositol polyphosphate 1-phosphatase (3.1.3.57 from EC), are enzymes of the inositol phosphate second messenger signalling pathway, and share similar enzyme activity. Both enzymes exhibit an absolute requirement for metal ions (Mg2+ is preferred), and their amino acid sequences contain a number of conserved motifs, which are also shared by several other proteins related to MPTASE (including products of fungal QaX and qutG, bacterial suhB and cysQ, and yeast hal2) []. The function of the other proteins is not yet clear, but it is suggested that they may act by enhancing the synthesis or degradation of phosphorylated messenger molecules []. Structural analysis of these proteins has revealed a common core of 155 residues, which includes residues essential for metal binding and catalysis. An interesting property of the enzymes of this family is their sensitivity to Li+. The targets and mechanism of action of Li+ are unknown, but overactive inositol phosphate signalling may account for symptoms of manic depression [].; GO: 0004437 inositol or phosphatidylinositol phosphatase activity; PDB: 1IMF_A 1IMA_A 1IMB_A 1IMD_A 1IMC_A 1IME_A 1AWB_A 2HHM_B 2QFL_A 1INP_A ....
Probab=45.16 E-value=3.5 Score=30.41 Aligned_cols=47 Identities=21% Similarity=0.322 Sum_probs=32.3
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
.|||||| -..|++|..-|+..++.++=|+--.=|+-..+..++|.+.
T Consensus 88 viDPIDG----T~nf~~g~p~~~i~ial~~~g~pv~gvi~~P~~~~~~~a~ 134 (270)
T PF00459_consen 88 VIDPIDG----TRNFVRGLPEFAISIALLVNGEPVAGVIYDPFLGELYYAS 134 (270)
T ss_dssp EEEEEET----HHHHHHTSSG-EEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred Eeccccc----chhhhhhhhHHHHHHHHHHhhhhhhheeecccccceeeee
Confidence 4788888 3478889888888877777555555566666677766543
No 15
>PLN02911 inositol-phosphate phosphatase
Probab=45.05 E-value=7.4 Score=29.96 Aligned_cols=47 Identities=19% Similarity=0.379 Sum_probs=33.0
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
.||||||= ..|++|.-.|+..++.++=|+--.=|+-..+.+++|.+.
T Consensus 113 iIDPIDGT----~NFv~G~p~favsIal~~~g~pv~GvV~~P~~~e~y~A~ 159 (296)
T PLN02911 113 VLDPIDGT----KSFITGKPLFGTLIALLYKGKPVLGIIDQPVLKERWVGV 159 (296)
T ss_pred EEeCCcCh----HHHhcCCCceEEEEEEEECCEEEEEEEecCCCCCEEEEE
Confidence 36999993 388899999987777666555455566666677776543
No 16
>TIGR02067 his_9_proposed histidinol-phosphate phosphatase HisN, inositol monophosphatase family. This subfamily belongs to the inositol monophosphatase family (pfam00459). The members of this family consist of no more than one per species and are found only in species in which histidine is synthesized de novo but no histidinol phosphatase can be found in either of the two described families (TIGR01261, TIGR01856). In at least one species, the member of this family is found near known histidine biosynthesis genes.
Probab=44.03 E-value=7.7 Score=28.65 Aligned_cols=46 Identities=17% Similarity=0.236 Sum_probs=30.7
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
||||||= ..+++|.-.|+..++.++=|+-..=|+-..+..++|.+.
T Consensus 79 iDPIDGT----~nF~~g~p~~~vsial~~~g~p~~gvv~~P~~~~~~~A~ 124 (251)
T TIGR02067 79 LDPIDGT----KSFIRGVPVWGTLIALVEGGMPVLGVIFQPATGERWWAA 124 (251)
T ss_pred EecCcCh----hHHhcCCCceEEEEEEEECCEEEEEEEEEcCCCCEEEEe
Confidence 7999993 378888888886666666555455555556666666543
No 17
>PF12762 DDE_Tnp_IS1595: ISXO2-like transposase domain; InterPro: IPR024445 This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.
Probab=42.29 E-value=16 Score=24.56 Aligned_cols=17 Identities=41% Similarity=0.751 Sum_probs=14.5
Q ss_pred ccccEEEecccccccee
Q psy5923 13 ELDGVVVFEEDYIQDRK 29 (88)
Q Consensus 13 pVDGVVlvDpeylk~rK 29 (88)
|++|+|=||..|+.+++
T Consensus 1 ~L~G~VEiDEty~~~~~ 17 (151)
T PF12762_consen 1 PLSGIVEIDETYFGGRK 17 (151)
T ss_pred CCCCEEEeCcCEECCcc
Confidence 67899999999997655
No 18
>PF09961 DUF2195: Uncharacterized protein conserved in bacteria (DUF2195); InterPro: IPR018696 This family of various bacterial proteins has no known function.
Probab=41.89 E-value=20 Score=25.65 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=18.9
Q ss_pred EEEeccccccceeEEEEEeee
Q psy5923 17 VVVFEEDYIQDRKVFGQVVCS 37 (88)
Q Consensus 17 VVlvDpeylk~rKVfvql~ca 37 (88)
|+-.||.+..+|+|-++|.|+
T Consensus 98 ~LAsd~~l~~~r~v~v~l~Ca 118 (121)
T PF09961_consen 98 VLASDPALAGDREVAVRLGCA 118 (121)
T ss_pred EEecChhhhcCCceEEEEecC
Confidence 566799999999999999997
No 19
>cd01643 Bacterial_IMPase_like_2 Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate inositol monophosphate or similar substrates.
Probab=41.86 E-value=8.4 Score=28.51 Aligned_cols=45 Identities=11% Similarity=0.244 Sum_probs=31.3
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLA 59 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~ 59 (88)
||||||=. .|++|.-.|+..++.++=|+--.=|+-..+.+++|.+
T Consensus 76 IDPIDGT~----nF~~g~p~~~vsial~~~g~pv~GvV~~P~~~~~~~A 120 (242)
T cd01643 76 IDPIDGTT----NFARGIPIWAISIALLYRGEPVFGVIALPALNQTFVA 120 (242)
T ss_pred EeCccChH----HHhcCCCceEEEEEEEECCEEEEEEEecCCCCCEEEE
Confidence 89999943 7889998998777776655544445555566666654
No 20
>PLN02553 inositol-phosphate phosphatase
Probab=41.02 E-value=9.1 Score=28.56 Aligned_cols=47 Identities=13% Similarity=0.041 Sum_probs=32.9
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
.||||||= ..+++|.-.|+..++.++-|+--.=|+-..+.+++|.+.
T Consensus 89 iIDPIDGT----~NF~~g~p~~avsIal~~~g~pv~GvV~~P~~~e~~~A~ 135 (270)
T PLN02553 89 IVDPLDGT----TNFVHGFPFVCVSIGLTIGKVPVVGVVYNPILDELFTAV 135 (270)
T ss_pred EEecccch----hhHhhcCCceEEEEEEEECCEEEEEEEecCCCCCeEEEE
Confidence 68999993 378889888887777776665555555556666666543
No 21
>cd01638 CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family. It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation).
Probab=37.77 E-value=8.7 Score=28.13 Aligned_cols=46 Identities=24% Similarity=0.275 Sum_probs=31.6
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhh
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLAS 60 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t 60 (88)
||||||- ..|++|.--|...++.++=|+--.=|+-..+..++|.+.
T Consensus 79 iDPIDGT----~Nfv~g~p~~~isial~~~g~pv~gvi~~P~~~~~~~A~ 124 (242)
T cd01638 79 VDPLDGT----REFIKGNGEFAVNIALVEDGRPVLGVVYAPALGELYYAL 124 (242)
T ss_pred EecccCh----HHHhcCCCCeEEEEEEEECCEEEEEEEecCCCCCEEEEE
Confidence 8999993 388899888887777666554444455556666766653
No 22
>cd01637 IMPase_like Inositol-monophosphatase-like domains. This family of phosphatases is dependent on bivalent metal ions such as Mg++, and many members are inhibited by Li+ (which is thought to displace a bivalent ion in the active site). Substrates include fructose-1,6-bisphosphate, inositol poly- and monophosphates, PAP and PAPS, sedoheptulose-1,7-bisphosphate and probably others.
Probab=34.29 E-value=14 Score=26.67 Aligned_cols=46 Identities=17% Similarity=0.291 Sum_probs=28.3
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhh
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLA 59 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~ 59 (88)
.||||||=- .+++|...|+..++.++=|+--.=|+-..+..++|.+
T Consensus 78 viDPIDGT~----nf~~g~p~~~vsial~~~g~pv~gvv~~P~~~~~~~a 123 (238)
T cd01637 78 VIDPIDGTT----NFVAGLPNFAVSIALYEDGKPVLGVIYDPMLDELYYA 123 (238)
T ss_pred EEcceeChh----hhhcCCCCEEEEEEEEECCEEEEEEEecCCCCcEEEE
Confidence 578888833 6778888888777766545433334444445555543
No 23
>KOG1577|consensus
Probab=32.84 E-value=11 Score=30.42 Aligned_cols=36 Identities=14% Similarity=0.489 Sum_probs=26.2
Q ss_pred EEEEeeeeeeccccccccccc--------hhhHhhhhhcccccCC
Q psy5923 31 FGQVVCSFRYGREEDEILGLN--------FQKELYLASEQIYPRS 67 (88)
Q Consensus 31 fvql~caFRYGRED~dVmGL~--------FrKdl~l~t~QvyP~~ 67 (88)
|=++=||..||.|+.---+|. =|.|||+.|. +||..
T Consensus 42 YRHIDtA~~Y~NE~evG~aik~~i~~~~v~RediFiTSK-lw~~~ 85 (300)
T KOG1577|consen 42 YRHIDTAHVYGNEKEVGEAIKELLAEGGVKREDIFITSK-LWPTD 85 (300)
T ss_pred cceeechhhhCChHHHHHHHHHHhhhCCcchhhheeeec-cCccc
Confidence 778899999999986433332 3578888766 88854
No 24
>PLN02373 soluble inorganic pyrophosphatase
Probab=31.71 E-value=80 Score=23.73 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=37.7
Q ss_pred cccCCCCCcccccEEEeccccccceeEEEEEeeeeee---ccccccccccchh
Q psy5923 4 GTYGETFPMELDGVVVFEEDYIQDRKVFGQVVCSFRY---GREEDEILGLNFQ 53 (88)
Q Consensus 4 ~~~~~~~VdpVDGVVlvDpeylk~rKVfvql~caFRY---GRED~dVmGL~Fr 53 (88)
.|++.| =||+|.+|+.+.....|--+=+.++.+++- |..|+-++++.-.
T Consensus 69 ~T~~~D-gDPLDvlvl~~~~~~~G~vi~~R~iG~l~m~D~ge~D~KiIaV~~~ 120 (188)
T PLN02373 69 RTLCED-NDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD 120 (188)
T ss_pred ccccCC-CCccEEEEecCCCCCCceEEEEEEEEEEEEeeCCCCCCeEEEEECC
Confidence 355554 489999999888777898888888888876 6667778887654
No 25
>PF14385 DUF4416: Domain of unknown function (DUF4416)
Probab=30.46 E-value=60 Score=23.90 Aligned_cols=16 Identities=6% Similarity=0.387 Sum_probs=12.8
Q ss_pred ceeEEEEEeeeeeecc
Q psy5923 27 DRKVFGQVVCSFRYGR 42 (88)
Q Consensus 27 ~rKVfvql~caFRYGR 42 (88)
+.-||+.+|..|+.|+
T Consensus 122 ~~GIyaE~tL~y~~g~ 137 (164)
T PF14385_consen 122 GDGIYAELTLIYQKGS 137 (164)
T ss_pred cCCEEEEEEEEEECCe
Confidence 3448999999999885
No 26
>TIGR01330 bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase, HAL2 family. Some members of this family are active also as inositol 1-monophosphatase.
Probab=28.17 E-value=31 Score=27.65 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=27.3
Q ss_pred CcccccEEEeccccccceeEEEEEeeeeeeccccccccccch
Q psy5923 11 PMELDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNF 52 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~rKVfvql~caFRYGRED~dVmGL~F 52 (88)
||||||= ..+++|. -|+..++-..=|+--+=|+...+
T Consensus 135 IDPIDGT----~nFv~G~-~~avsIaL~~~G~pv~GVV~~P~ 171 (353)
T TIGR01330 135 LDPIDGT----KGFLRGD-QYAVCLALIENGKVVLGVIGCPN 171 (353)
T ss_pred EcCccCc----hhhhcCC-ceEEEEEEEECCEEEEEEEecCC
Confidence 9999993 4888995 78777776666666666666666
No 27
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted.; PDB: 2OO3_A.
Probab=26.93 E-value=31 Score=26.79 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=12.4
Q ss_pred ccEEEecccccc-------------ceeEEEEEeeeeeec
Q psy5923 15 DGVVVFEEDYIQ-------------DRKVFGQVVCSFRYG 41 (88)
Q Consensus 15 DGVVlvDpeylk-------------~rKVfvql~caFRYG 41 (88)
-|+|+|||.|=. ..|=|.+=+++--|.
T Consensus 126 RglVLIDPpYE~~~dy~~v~~~l~~a~kR~~~G~~~iWYP 165 (245)
T PF04378_consen 126 RGLVLIDPPYEQKDDYQRVVDALAKALKRWPTGVYAIWYP 165 (245)
T ss_dssp -EEEEE-----STTHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHHhcCCcEEEEEee
Confidence 589999998742 233344446667774
No 28
>PRK01250 inorganic pyrophosphatase; Provisional
Probab=25.66 E-value=1.1e+02 Score=22.64 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=36.4
Q ss_pred cccCCCCCcccccEEEeccccccceeEEEEEeeeeee---ccccccccccch
Q psy5923 4 GTYGETFPMELDGVVVFEEDYIQDRKVFGQVVCSFRY---GREEDEILGLNF 52 (88)
Q Consensus 4 ~~~~~~~VdpVDGVVlvDpeylk~rKVfvql~caFRY---GRED~dVmGL~F 52 (88)
+|++.|. ||+|.+|+.+....-|--+=+.++.+++- |..|+-++++.=
T Consensus 61 ~T~~~Dg-DPLDvlvl~~~~~~~G~vv~~r~iG~l~m~D~ge~D~KiiaV~~ 111 (176)
T PRK01250 61 HTLSLDG-DPVDVLVVTPYPLVPGSVIRCRPVGVLKMEDESGEDAKIIAVPH 111 (176)
T ss_pred CcccCCC-CceEEEEecCCCCCCceEEEEEEEEEEEeecCCCCCCeEEEEEC
Confidence 3565553 99999999988777888888888888888 445666777654
No 29
>PRK00642 inorganic pyrophosphatase; Provisional
Probab=24.48 E-value=1.2e+02 Score=23.09 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=32.6
Q ss_pred CcccccEEEeccccccce-eEEEEEeeeeee---ccccccccccchh
Q psy5923 11 PMELDGVVVFEEDYIQDR-KVFGQVVCSFRY---GREEDEILGLNFQ 53 (88)
Q Consensus 11 VdpVDGVVlvDpeylk~r-KVfvql~caFRY---GRED~dVmGL~Fr 53 (88)
=||+|.+|+.+.....|- .+=+.++.+++- |..|+=++++.=.
T Consensus 93 gDPLDvlvl~~~~~~~G~v~i~~R~iG~l~miD~ge~D~KIiaV~~~ 139 (205)
T PRK00642 93 GDPLDICVLTEKNITHGNILLQARPIGGLRMIDGGEADDKIIAVLED 139 (205)
T ss_pred CCceEEEEecCCCcCCCceEEEEEEeEEEEEecCCCccceEEEEECC
Confidence 489999999887766675 567888999988 4446768777654
No 30
>PF12473 DUF3694: Kinesin protein ; InterPro: IPR022164 This domain family is found in eukaryotes, and is typically between 131 and 151 amino acids in length. The family is found in association with PF00225 from PFAM, PF00498 from PFAM. There is a single completely conserved residue W that may be functionally important.
Probab=23.48 E-value=62 Score=22.36 Aligned_cols=44 Identities=18% Similarity=0.400 Sum_probs=30.5
Q ss_pred EEeccccccceeEEEEEeeeeeeccccccccccchhhHhhhhhcccccCC
Q psy5923 18 VVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRS 67 (88)
Q Consensus 18 VlvDpeylk~rKVfvql~caFRYGRED~dVmGL~FrKdl~l~t~QvyP~~ 67 (88)
.++|.+--+|.|||.++.+.=+--+-. +=+.|+||+.+ +|||..
T Consensus 95 ~~LNr~T~~~~rV~~tv~~~v~~~~~~---ePv~f~~di~v---~I~~r~ 138 (140)
T PF12473_consen 95 LLLNRVTPKGERVYMTVAVDVVISHCQ---EPVRFRKDICV---RIYPRD 138 (140)
T ss_pred HHcCCCCCCCCEEEEEEEEEEEeCCCC---CceEEEEEEEE---EEeCCC
Confidence 345555557899999998877765533 34679999876 577753
No 31
>cd01642 Arch_FBPase_2 Putative fructose-1,6-bisphosphatase or related enzymes of inositol monophosphatase family. These are Mg++ dependent phosphatases. Members in this family may have fructose-1,6-bisphosphatase and/or inositol-monophosphatase activity. Fructose-1,6-bisphosphatase catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway.
Probab=23.48 E-value=51 Score=24.64 Aligned_cols=28 Identities=18% Similarity=0.202 Sum_probs=18.7
Q ss_pred CCcccccEEEeccccccceeEEEEEeeeeeec
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSFRYG 41 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caFRYG 41 (88)
.||||||= ..+++|.-.|+..++...-|
T Consensus 78 iIDPIDGT----~NFi~g~P~favsIal~~~g 105 (244)
T cd01642 78 VLDPLDGS----TNYLSGIPFYSVSVALADPR 105 (244)
T ss_pred EEeCCcCc----HHHHcCCCCeEEEEEEEECC
Confidence 58999993 36777877777555544433
No 32
>cd01636 FIG FIG, FBPase/IMPase/glpX-like domain. A superfamily of metal-dependent phosphatases with various substrates. Fructose-1,6-bisphospatase (both the major and the glpX-encoded variant) hydrolyze fructose-1,6,-bisphosphate to fructose-6-phosphate in gluconeogenesis. Inositol-monophosphatases and inositol polyphosphatases play vital roles in eukaryotic signalling, as they participate in metabolizing the messenger molecule Inositol-1,4,5-triphosphate. Many of these enzymes are inhibited by Li+.
Probab=22.81 E-value=29 Score=24.13 Aligned_cols=25 Identities=16% Similarity=0.387 Sum_probs=18.6
Q ss_pred CCcccccEEEeccccccceeEEEEEeeee
Q psy5923 10 FPMELDGVVVFEEDYIQDRKVFGQVVCSF 38 (88)
Q Consensus 10 ~VdpVDGVVlvDpeylk~rKVfvql~caF 38 (88)
.||||||= ..+++|.--|+..++.+
T Consensus 82 iiDPiDGT----~nf~~g~p~~~vsial~ 106 (184)
T cd01636 82 VIDPIDGT----KNFINGLPFVAVVIAVY 106 (184)
T ss_pred EEecccCh----HHHHhCCCCEEEeHHHH
Confidence 48999993 47888888888665543
No 33
>PRK02230 inorganic pyrophosphatase; Provisional
Probab=22.62 E-value=1.3e+02 Score=22.56 Aligned_cols=48 Identities=10% Similarity=0.263 Sum_probs=33.9
Q ss_pred cccCCCCCcccccEEEeccccccceeEEEEEeeeeee---ccccccccccch
Q psy5923 4 GTYGETFPMELDGVVVFEEDYIQDRKVFGQVVCSFRY---GREEDEILGLNF 52 (88)
Q Consensus 4 ~~~~~~~VdpVDGVVlvDpeylk~rKVfvql~caFRY---GRED~dVmGL~F 52 (88)
+|++.| =||+|.+|+-+....-|.-+=+.++.+++- |..|+-++++.=
T Consensus 49 ~Tl~~D-GDPLDvlvl~~~~~~pG~vi~~r~IGvl~m~D~ge~D~KIIaV~~ 99 (184)
T PRK02230 49 EALDWD-GDELDVLVYSDQKFLPGTVLNARIIGAMKMIDDGETDTKLIAVHD 99 (184)
T ss_pred CccCCC-CCceEEEEECCCCCCCccEEEEEEEEEEEeccCCCcCcEEEEEEC
Confidence 456554 389999998876666777666777777766 555777877743
No 34
>KOG1069|consensus
Probab=21.48 E-value=60 Score=25.37 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=25.3
Q ss_pred CCCCCcccccEEEeccccccceeEEEEEeeeeeec
Q psy5923 7 GETFPMELDGVVVFEEDYIQDRKVFGQVVCSFRYG 41 (88)
Q Consensus 7 ~~~~VdpVDGVVlvDpeylk~rKVfvql~caFRYG 41 (88)
|..+.=.=||++++||...++++--..-+.+|-||
T Consensus 131 ai~~~~~~d~~lv~Dpt~~qek~~~~~~~lsf~~~ 165 (217)
T KOG1069|consen 131 AISCALHEDGVLVLDPTAKQEKISTARATLSFEGG 165 (217)
T ss_pred hceEEEecCccEEECCcHHhhhhhhceEEEEEecC
Confidence 44444445899999999999885444447788887
No 35
>COG3350 Uncharacterized conserved protein [Function unknown]
Probab=21.44 E-value=41 Score=20.96 Aligned_cols=15 Identities=7% Similarity=0.093 Sum_probs=10.8
Q ss_pred CCCcccccEEEecccc
Q psy5923 9 TFPMELDGVVVFEEDY 24 (88)
Q Consensus 9 ~~VdpVDGVVlvDpey 24 (88)
+.+|||+|.- ||++.
T Consensus 2 ~~iDPVcgm~-v~~~~ 16 (53)
T COG3350 2 DVIDPVCGMK-VDNEN 16 (53)
T ss_pred ccccCCcCcc-ccccc
Confidence 5689999966 56443
No 36
>PF06299 DUF1045: Protein of unknown function (DUF1045); InterPro: IPR009389 This family consists of several hypothetical proteins from Agrobacterium, Rhizobium and Brucella species. The function of this family is unknown.
Probab=20.75 E-value=67 Score=23.64 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=15.1
Q ss_pred CCCCCHHHHhhhc---CCcCC
Q psy5923 71 HTSLTKMQTQNSQ---HPVWV 88 (88)
Q Consensus 71 ~~~lT~lQe~LlK---~p~~~ 88 (88)
+..||+-|+++|. |||.+
T Consensus 84 ~~~Ls~~Q~~~L~rWGYPYV~ 104 (160)
T PF06299_consen 84 PAGLSPRQRANLERWGYPYVM 104 (160)
T ss_pred cccCCHHHHHHHHHhCCCcee
Confidence 4679999999998 88864
No 37
>cd07998 WGR_DNA_ligase WGR domain of bacterial DNA ligases. The WGR domain is found in a small family of predicted bacterial DNA ligases. It has been called WGR after the most conserved central motif of the domain. The domain typically occurs in together with an ATP-dependent DNA ligase domain, and is between 70 and 80 residues in length. It has been proposed to function as a nucleic acid binding domain.
Probab=20.66 E-value=1.1e+02 Score=20.08 Aligned_cols=18 Identities=39% Similarity=0.722 Sum_probs=12.5
Q ss_pred eeEEEEEee---------eeeeccccc
Q psy5923 28 RKVFGQVVC---------SFRYGREED 45 (88)
Q Consensus 28 rKVfvql~c---------aFRYGRED~ 45 (88)
.|+|---++ ++||||---
T Consensus 13 ~Kfyev~~~~~~d~g~~v~~~yGR~Gt 39 (77)
T cd07998 13 DKVYEVDLFEVSDDGYVVNFRYGRRGS 39 (77)
T ss_pred ceEEEEEEEeccCCceEEEEEEccccC
Confidence 566655555 899999643
Done!