BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5925
(696 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157124378|ref|XP_001660448.1| DNA polymerase zeta catalytic subunit [Aedes aegypti]
gi|108874011|gb|EAT38236.1| AAEL009851-PA [Aedes aegypti]
Length = 2080
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/494 (49%), Positives = 323/494 (65%), Gaps = 51/494 (10%)
Query: 199 RKQLETPKRRIC--DSYAIDAMTPDT-TGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAI 255
RK+ +T K R+ S I A+TP+ T +++ +NL + + E +LT+++VE+H
Sbjct: 1190 RKRRKTMKARLSLKHSGNISAVTPNNNTYGFKVNYENLQKAKATCEYNFLTIMSVEVHIQ 1249
Query: 256 SRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV----GIILIGQESELPEVRTKPIQMNFV 311
+R L+P+P D + AIFY ++ PE+ R+ GIIL + R P + N
Sbjct: 1250 TRGELRPNPEIDPISAIFYRIHNDVPEDHRRAPSVCGIILNHEHGLAATDRLDPYKYN-- 1307
Query: 312 SNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDP 371
Y+ + VSNE+EL+ F+ + WDP
Sbjct: 1308 ------------------------------KCNYMADVVTVSNERELYEKFLMLISFWDP 1337
Query: 372 DILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK--------NTQL 423
DI GYEIE SWGY+++RGY L +NL + LSR+ EK + S +E + + L
Sbjct: 1338 DIFAGYEIEQASWGYIIQRGYSLEMNLMKMLSRVPTAEKVHVSEEEEQELLEMHEYSAGL 1397
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
++PGRI++++WRL+RHE+ L SYTFENI++H+LH R+ H++K LT W KW+
Sbjct: 1398 KIPGRILLDIWRLMRHEIALTSYTFENIVFHILHRRVSCHAFKQLTRLWN--KPYSKWIV 1455
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+E+YL RV G + L+ QLD IGRT+E+A+LFGIQFYEVLSRGSQFRVES+MLR+++ NF
Sbjct: 1456 LEYYLERVNGNLELLHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLRIAKPRNF 1515
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
V+VSPSI+QRAHMRAPE LPLILEPESR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGR
Sbjct: 1516 VSVSPSIQQRAHMRAPEYLPLILEPESRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGR 1575
Query: 604 VEHLGVSDSFPFGCIDLNVSIRSLKKL-QQNL-TISPSGVAFVDKSIRCGILPKMLQEIL 661
VEHLG S+ F FG L +S R LK L ++NL TISP G+AFV S+R GILP+ML EIL
Sbjct: 1576 VEHLGQSEPFEFGASHLRLSPRMLKVLVEKNLITISPCGIAFVKSSVREGILPRMLNEIL 1635
Query: 662 DTRLMVKQSMKEYK 675
TRLMVK SMK +K
Sbjct: 1636 TTRLMVKGSMKLHK 1649
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 41/47 (87%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S+ F FG
Sbjct: 1543 RFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGQSEPFEFGA 1589
>gi|328718109|ref|XP_001949189.2| PREDICTED: DNA polymerase zeta catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1485
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/447 (49%), Positives = 309/447 (69%), Gaps = 44/447 (9%)
Query: 235 EVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQ 294
++T + +N LT++ +E+H +R + PDP YD ++ IFY ++ E + G IL+ Q
Sbjct: 664 DITKNSDN--LTIITMELHTQTRINMNPDPEYDCIQGIFYTIFNMS-ENSSRTGSILVNQ 720
Query: 295 ESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSN 354
+ + P+I++ ++
Sbjct: 721 -----------------------INNNFNGFSNFKPEIIV-----------------CND 740
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-EVEKRNS 413
E EL + F + V WDP+++ GYE+E SWGYL +R LG N+N+ELSR+T E E+ +
Sbjct: 741 EIELVNTFFQLVNNWDPEVICGYEMEMHSWGYLKDRCRHLGRNMNKELSRLTIENEQSSE 800
Query: 414 SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+E+ N++L++ GRIV+++WRLLRHE+ +QSYTFEN++Y +LH+R+P +S++ L+ WW+
Sbjct: 801 YNEEITNSELKIKGRIVLDVWRLLRHELAVQSYTFENMVYLILHQRVPNYSYQTLSFWWD 860
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
H T LY+W+T+++YL +V I +++QLD IGRTSE+A+LFGIQFYEVLSRGSQFRVES+
Sbjct: 861 HNTLLYRWLTMDYYLFKVESTINILQQLDIIGRTSELAKLFGIQFYEVLSRGSQFRVESM 920
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
MLRL++ N+VAVSPSIKQRA M A +S+PLI+EPES+ YTDP+IVLDFQSLYPS+IIAY
Sbjct: 921 MLRLAKNKNYVAVSPSIKQRAEMNAAQSVPLIMEPESKFYTDPVIVLDFQSLYPSIIIAY 980
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYCFSTCLG ++ LG ++ F FGC LNV ++L KL ++TISPSGVAFV K+I GIL
Sbjct: 981 NYCFSTCLGNIDLLGKTEVFKFGCTKLNVPFQTLLKLTDDMTISPSGVAFVKKNICKGIL 1040
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESL 680
P MLQEILDTR+MVK MKE K ++ L
Sbjct: 1041 PSMLQEILDTRIMVKNLMKEQKNNKHL 1067
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
+ YTDP+IVLDFQSLYPS+IIAYNYCFSTCLG ++ LG ++ F FGC
Sbjct: 958 KFYTDPVIVLDFQSLYPSIIIAYNYCFSTCLGNIDLLGKTEVFKFGC 1004
>gi|347965478|ref|XP_003435770.1| AGAP013386-PA [Anopheles gambiae str. PEST]
gi|333470492|gb|EGK97643.1| AGAP013386-PA [Anopheles gambiae str. PEST]
Length = 2191
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/487 (48%), Positives = 321/487 (65%), Gaps = 46/487 (9%)
Query: 215 IDAMTP-DTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIF 273
I + TP D T +++ +NL + S E YLTV++VEIH +R L+P+PA D + AIF
Sbjct: 1313 ISSATPSDNTFGFKVDYENLQDAKSKCEYNYLTVMSVEIHVNTRGDLRPNPATDPIAAIF 1372
Query: 274 YYLYT-CPPEEDRKVGI--ILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDP 330
Y ++ PP R + I++ ++ E E E V+
Sbjct: 1373 YRIHNDVPPNHPRASSVCGIILNRDHEGRE---------------------FERVQGQ-- 1409
Query: 331 DILIGYEIETFSWG---YLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYL 387
G + +F + Y+ + VS+E EL+ F+ + WDPDI GYEIE++SWGY+
Sbjct: 1410 ---AGGKTASFKYNQCPYVADVVLVSDESELYEKFLLLISFWDPDIFTGYEIESVSWGYV 1466
Query: 388 LERGYVLGLNLNQELSRITEVEKRNSSRDEVK--------NTQLQMPGRIVINLWRLLRH 439
+ERGY L +NL + LSR+ E + S +E + + L++PGRI++++WRL+RH
Sbjct: 1467 IERGYALEMNLMKRLSRVPSAETVHVSEEEQRELLEMHDYSAGLKIPGRILLDIWRLMRH 1526
Query: 440 EVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIE 499
E+ L SYTFEN++YH+LH R+P HS++ L+ W +W+ +E+YL RV G ++
Sbjct: 1527 EIALTSYTFENVVYHILHRRVPNHSYRQLSRLWSK--PYSRWIVLEYYLERVNGNFEILN 1584
Query: 500 QLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAP 559
QLD IGRT+E+A+LFGIQFYEVLSRGSQFRVES+M+R+++ NFV+VSPSI QRAHMRAP
Sbjct: 1585 QLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMMRIAKPRNFVSVSPSINQRAHMRAP 1644
Query: 560 ESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV-SDSFPFGCI 618
E LPLILEP SR Y DPIIVLDFQSLYPSVIIAYNYCFSTCLGR+EHLG ++SF FG
Sbjct: 1645 EYLPLILEPNSRFYADPIIVLDFQSLYPSVIIAYNYCFSTCLGRIEHLGKDTESFEFGAS 1704
Query: 619 DLNVSIRSLKK-LQQNL-TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKF 676
L V + LK L +NL T SP GVAFV K +R G+LP+ML EIL+TRLMVK+SMK +K
Sbjct: 1705 RLRVPPKMLKALLDKNLVTFSPCGVAFVKKRVREGVLPRMLSEILNTRLMVKKSMKLHKD 1764
Query: 677 SESLRNL 683
+ L+ +
Sbjct: 1765 NSVLQRV 1771
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV-SDSFPFGC 155
R Y DPIIVLDFQSLYPSVIIAYNYCFSTCLGR+EHLG ++SF FG
Sbjct: 1656 RFYADPIIVLDFQSLYPSVIIAYNYCFSTCLGRIEHLGKDTESFEFGA 1703
>gi|242006490|ref|XP_002424083.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212507389|gb|EEB11345.1| DNA polymerase zeta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 2605
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/486 (47%), Positives = 318/486 (65%), Gaps = 50/486 (10%)
Query: 201 QLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALL 260
++ P++ + +S+ I +T + T + ++NL +V + + YLT+L VE+H +R L
Sbjct: 1733 KVRVPQQGLDNSFQIRGITLENTFGFDNSVENLQDVKLNNTHQYLTMLFVEVHIRTRKNL 1792
Query: 261 KPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFST 320
+PDP YD ++A+FY + P +D + G+I++ N V+ EK
Sbjct: 1793 RPDPDYDPIRALFYTVSFDSPGKDDETGVIVV----------------NDVALEKSAVGG 1836
Query: 321 FIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIE 380
N H+V EK+L IE V+ WDP I+ GYEIE
Sbjct: 1837 VGRNTT-----------------------HYVPTEKDLLLKLIELVKIWDPYIIAGYEIE 1873
Query: 381 TLSWGYLLERGYVLGLNLNQELSR-ITEVEKRNSSRDEVKNTQ----------LQMPGRI 429
SWGY+ +RG++ LNL LSR +TE + ++ D++ + L++ GRI
Sbjct: 1874 MNSWGYIFQRGFICELNLFTLLSRAVTENKGSWNAADKIHENEFEDLPKCIRDLKICGRI 1933
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
V+++WRLLRHEV L SYTFEN+MYH+ HER P S++ L+ +WEH + ++ +T +Y+
Sbjct: 1934 VLDIWRLLRHEVTLSSYTFENVMYHLSHERHPNLSYENLSYYWEHPSDRFRHLTYNYYVT 1993
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV GI ++++QLDF+ RTSE ARLFGIQFYEVLSRGSQFRVES+MLRL++ N++ VSPS
Sbjct: 1994 RVEGINKILKQLDFVNRTSEFARLFGIQFYEVLSRGSQFRVESMMLRLAKPLNYIPVSPS 2053
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
+ QRA MRAP SLPLILEPES YTDP+IVLDFQSLYPS+IIAYNYCFSTCLGRVE LG
Sbjct: 2054 VSQRASMRAPASLPLILEPESIFYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEKLGG 2113
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQ 669
+ F FGC L +S LK+L+ +++ISP+GVAFV S+R GILP MLQEIL+TRL+VK+
Sbjct: 2114 REPFEFGCTQLQISPEELKRLENDISISPAGVAFVKGSVRKGILPTMLQEILETRLIVKK 2173
Query: 670 SMKEYK 675
SMKE K
Sbjct: 2174 SMKENK 2179
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
YTDP+IVLDFQSLYPS+IIAYNYCFSTCLGRVE LG + F FGC
Sbjct: 2076 FYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEKLGGREPFEFGC 2121
>gi|170055192|ref|XP_001863472.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
gi|167875216|gb|EDS38599.1| DNA polymerase zeta catalytic subunit [Culex quinquefasciatus]
Length = 1959
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/480 (48%), Positives = 314/480 (65%), Gaps = 52/480 (10%)
Query: 212 SYAIDAMTP--DTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEV 269
S I A TP + T +++ +NL + + E +L V++VE+H +R L+P+P D +
Sbjct: 1079 SGNISAATPRNNNTYGFKVSFENLQKAKATCEYNHLAVMSVELHVQTRGDLRPNPDIDPI 1138
Query: 270 KAIFYYLYTCPPEEDRKV----GIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENV 325
A+FY ++ P + R+ GIIL Q S V + ++ N S
Sbjct: 1139 SAVFYRIHNDVPADHRRAPSVCGIILNRQSSS--GVVSDAVKYNQCS------------- 1183
Query: 326 RQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWG 385
+ D+++ V +E+EL+ F+ + WDPDI GYEIE SWG
Sbjct: 1184 --YTADVVV-----------------VGSERELYEKFLVLISFWDPDIFAGYEIEAGSWG 1224
Query: 386 YLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN--------TQLQMPGRIVINLWRLL 437
YL++RGY L +NL + LSR+ EK + S +E ++ L++PGRI++++WRL+
Sbjct: 1225 YLIQRGYALEMNLMKMLSRVPTAEKVHVSEEEEQDLLEMHEYSAGLKIPGRILLDIWRLM 1284
Query: 438 RHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRL 497
RHE+ L SYTFEN++YH+LH R+ HS++ LT W KW+ +E+YL RV G + L
Sbjct: 1285 RHEIALTSYTFENMVYHILHRRVSRHSFRFLTRLWNK--SYTKWVVLEYYLERVNGNLEL 1342
Query: 498 IEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMR 557
++QLD IGRT+E+A+LFGIQFYEVLSRGSQFRVES+MLR+++ NFV+VSPSI+QRAHMR
Sbjct: 1343 LQQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVESMMLRIAKPRNFVSVSPSIQQRAHMR 1402
Query: 558 APESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 617
+PE LPLILEP SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S+ F FG
Sbjct: 1403 SPEYLPLILEPNSRFYADPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHLGQSEPFEFGA 1462
Query: 618 IDLNVSIRSLKKL-QQNL-TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
L +S R LK L ++NL T+SP G FV S+R GILP+ML EIL TRLMVK SMK +K
Sbjct: 1463 SQLRLSPRMLKVLVEKNLVTVSPCGAVFVKSSVREGILPRMLNEILTTRLMVKASMKLHK 1522
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 41/47 (87%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S+ F FG
Sbjct: 1416 RFYADPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHLGQSEPFEFGA 1462
>gi|395534778|ref|XP_003769414.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sarcophilus
harrisii]
Length = 3136
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/500 (44%), Positives = 337/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ I+ + + T +++ + NL E + EN LT+++VE+HA +R L+
Sbjct: 2263 VNTPKK---ETSQIEGPSLNNTYGFKVSVQNLQEAKALHENQNLTLISVELHARTRRDLE 2319
Query: 262 PDPAYDEVKAIFYYLY--TCPPEEDRK--VGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + T P+ D+ G+I+I ++S +
Sbjct: 2320 PDPEFDPICALFYCISSDTALPDTDKTELTGVIVIDKDSTISS----------------- 2362
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ +R P +LI I LE + ++EK LF + ++++DPDIL+GY
Sbjct: 2363 -----QGIRNQTP-LLIRSGISR------LEVTYAADEKALFQEIVNIIKRYDPDILLGY 2410
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2411 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFATERDEYGSDTMSEINIVGRITL 2470
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2471 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2530
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2531 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2590
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QRA MRAP+ +PLI+EPESR Y++ I+VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2591 QRAQMRAPQCVPLIMEPESRFYSNSILVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFD 2650
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2651 EFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2710
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2711 KAYKQDRALSR--MLNARQL 2728
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ I+VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2610 RFYSNSILVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLR 2660
>gi|334324484|ref|XP_003340527.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic
subunit-like [Monodelphis domestica]
Length = 3156
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/500 (44%), Positives = 337/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ +S ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2283 VNTPKK---ESSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLE 2339
Query: 262 PDPAYDEVKAIFYYLY--TCPPEEDRK--VGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + T P+ D+ G+I+I ++S +SN+
Sbjct: 2340 PDPEFDPICALFYSISSDTALPDTDKTELTGVIVIDKDST-------------ISNQ--- 2383
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+R P +LI I LE + ++EK LF + ++++DPDIL+GY
Sbjct: 2384 ------GIRNQTP-LLIRSGITR------LEVTYAADEKALFQEIVNIIKRYDPDILLGY 2430
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + + N + RDE + +++ + GRI +
Sbjct: 2431 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKTENRFAAERDEYGSDTMSEINIVGRITL 2490
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2491 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2550
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2551 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSMQ 2610
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QRA MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2611 QRAQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFD 2670
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2671 EYKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2730
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2731 KTYKQDRALSR--MLNARQL 2748
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D + FGC + R
Sbjct: 2630 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEYKFGCTSLR 2680
>gi|403289777|ref|XP_003936019.1| PREDICTED: DNA polymerase zeta catalytic subunit [Saimiri boliviensis
boliviensis]
Length = 3052
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/500 (44%), Positives = 337/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ ++NL E + E LT+++VE+HA +R L+
Sbjct: 2179 VNTPKK---ETSQIDGPSLNNTYGFKVSIENLQEAKALHEIQNLTLISVELHARTRRDLE 2235
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I +E
Sbjct: 2236 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKEK--------------------- 2274
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2275 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2326
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ E +E R + RDE + +++ + GRI +
Sbjct: 2327 EIQMHSWGYLLQRAAALSVDLCQMISRVPEDKIENRFAAERDEYGSYTMSEINIVGRITL 2386
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2387 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2446
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2447 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2506
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2507 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2566
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2567 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2626
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L L ML++ L
Sbjct: 2627 KAYKQDRAL--LRMLDARQL 2644
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2526 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
>gi|291396775|ref|XP_002714966.1| PREDICTED: DNA polymerase zeta [Oryctolagus cuniculus]
Length = 3128
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/500 (44%), Positives = 336/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ L NL E + E LT+++VE+HA +R L+
Sbjct: 2255 VNTPKK---ETSQIDGPSLNNTYGFKVSLQNLQEAKALHEIQNLTLISVELHARTRRDLE 2311
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRK----VGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P D + G+I+I ++
Sbjct: 2312 PDPEFDPICALFYCISSDTPLPDTENTELTGVIVIDKDK--------------------- 2350
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2351 -TAFGQDIRYQTP-LLIRSGITG------LEVTYAADEKALFQEIANVIKRYDPDILLGY 2402
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2403 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSDTMSEINIVGRITL 2462
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +H+LH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2463 NLWRIMRNEVALTNYTFENVSFHILHQRFPLFTFRMLSDWFDNKTDLYRWKMVDHYVSRV 2522
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2523 RGNLQMLEQLDVIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2582
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2583 QRSQMRAPQCIPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2642
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L + L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TRLMVKQSM
Sbjct: 2643 EFKFGCTSLRIPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSM 2702
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2703 KAYKQDRALSR--MLNARQL 2720
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2602 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2652
>gi|4079831|gb|AAC98785.1| DNA polymerase zeta catalytic subunit [Mus musculus]
Length = 3122
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/500 (44%), Positives = 335/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2249 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2305
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2306 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2348
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2349 -----QDIRSQTP-LLIRSGITG------LEVTYAADEKALFQEITNIIKRYDPDILLGY 2396
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2397 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2456
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2457 NLWRIMRNEVGLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2516
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+
Sbjct: 2517 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQ 2576
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2577 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2636
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TRLMVKQSM
Sbjct: 2637 EFKFGCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSM 2696
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2697 KSYKQDRALSR--MLNARQL 2714
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2596 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
>gi|6978946|dbj|BAA90768.1| DNA polymerase [Mus musculus]
Length = 3122
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/500 (44%), Positives = 335/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2249 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2305
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2306 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2348
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2349 -----QDIRSQTP-LLIRSGITG------LEVTYAADEKALFQEITNIIKRYDPDILLGY 2396
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2397 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2456
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2457 NLWRIMRNEVGLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2516
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+
Sbjct: 2517 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQ 2576
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2577 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2636
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TRLMVKQSM
Sbjct: 2637 EFKFGCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSM 2696
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2697 KSYKQDRALSR--MLNARQL 2714
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2596 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
>gi|148672985|gb|EDL04932.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Mus musculus]
Length = 3090
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/500 (44%), Positives = 335/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2217 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2273
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2274 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2316
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2317 -----QDIRSQTP-LLIRSGITG------LEVTYAADEKALFQEITNIIKRYDPDILLGY 2364
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2365 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2424
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2425 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2484
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+
Sbjct: 2485 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQ 2544
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2545 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2604
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TRLMVKQSM
Sbjct: 2605 EFKFGCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSM 2664
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2665 KSYKQDRALSR--MLNARQL 2682
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2564 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2614
>gi|153792337|ref|NP_035394.2| DNA polymerase zeta catalytic subunit [Mus musculus]
gi|341940501|sp|Q61493.3|DPOLZ_MOUSE RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
AltName: Full=Seizure-related protein 4
Length = 3122
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/500 (44%), Positives = 335/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2249 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2305
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2306 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2348
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2349 -----QDIRSQTP-LLIRSGITG------LEVTYAADEKALFQEITNIIKRYDPDILLGY 2396
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2397 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2456
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2457 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2516
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+
Sbjct: 2517 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQ 2576
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2577 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2636
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TRLMVKQSM
Sbjct: 2637 EFKFGCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSM 2696
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2697 KSYKQDRALSR--MLNARQL 2714
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2596 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
>gi|189234256|ref|XP_001811647.1| PREDICTED: similar to DNA polymerase zeta catalytic subunit
[Tribolium castaneum]
gi|270002615|gb|EEZ99062.1| hypothetical protein TcasGA2_TC004938 [Tribolium castaneum]
Length = 1518
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 306/475 (64%), Gaps = 57/475 (12%)
Query: 211 DSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVK 270
+S I + D T ++M +N + E YLT+L++E+H +R L+PDPAYD ++
Sbjct: 686 NSCQITGTSLDNTYGFKMTPENFQNAKALNECQYLTILSLELHIETRGDLRPDPAYDSIR 745
Query: 271 AIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDP 330
A+FY + P I L G V+ ++ + ++
Sbjct: 746 AVFYKIVEDGPGGTTSGVITLDG-------VKPSEVRCDLLN------------------ 780
Query: 331 DILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER 390
VS E+EL + ++ V+ DPDIL+GYEIE SWGYLL+R
Sbjct: 781 ---------------------VSTEEELLNELVKLVQNHDPDILVGYEIEMCSWGYLLDR 819
Query: 391 GYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFEN 450
G LG L L+R+ E RN L++ GRI++++WRLLRHEV LQSYTFEN
Sbjct: 820 GQALGHALVTSLARVREKHSRNED-------SLRITGRILLDVWRLLRHEVALQSYTFEN 872
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
I+YH+LH+RIPL+S+K L WW + L++ T+ HYL R +G+++++EQLD IGRTSE+
Sbjct: 873 IVYHLLHQRIPLYSFKQLALWWHN--PLFRHRTISHYLFRTSGVLQILEQLDLIGRTSEL 930
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES 570
ARLFGIQF+EVLSRGSQFRVES+MLRL++ NF+ VSPS++QRA M+APE LPLILEPES
Sbjct: 931 ARLFGIQFFEVLSRGSQFRVESMMLRLAKPLNFIPVSPSVQQRAKMKAPEFLPLILEPES 990
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
+LY DP+IVLDFQSLYPS+IIAYNYCFSTCLG+V +LG + F FG L VS + ++KL
Sbjct: 991 KLYVDPVIVLDFQSLYPSMIIAYNYCFSTCLGKVANLGKNAPFEFGATQLKVSKKQVEKL 1050
Query: 631 QQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ + SP GVAFV K +R GILP+ML+EILDTRLMVK +MK K + L+ +
Sbjct: 1051 LNDDCVNFSPCGVAFVKKQVRDGILPRMLREILDTRLMVKNAMKRNKDDQLLQKV 1105
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 14/94 (14%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNK 168
+LY DP+IVLDFQSLYPS+IIAYNYCFSTCLG+V +LG + F FG + S +
Sbjct: 991 KLYVDPVIVLDFQSLYPSMIIAYNYCFSTCLGKVANLGKNAPFEFGATQLKVSKK----- 1045
Query: 169 DSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQL 202
++ + DC ++F+P +F++KQ+
Sbjct: 1046 ---QVEKLLNDDC-----VNFSP-CGVAFVKKQV 1070
>gi|296199021|ref|XP_002747079.1| PREDICTED: DNA polymerase zeta catalytic subunit [Callithrix jacchus]
Length = 3127
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 337/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ ++NL E + E LT+++VE+HA +R L+
Sbjct: 2256 VNTPKK---ETSQIDGPSLNNTYGFKVSIENLQEAKALHEIQNLTLISVELHARTRRDLE 2312
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2313 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2351
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2352 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2403
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2404 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSYTMSEINIVGRITL 2463
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2464 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2523
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2524 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2583
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2584 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2643
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2644 EFKFGCTSLRVPPDLLYQVRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2703
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L L ML++ L
Sbjct: 2704 KAYKQDRAL--LRMLDARQL 2721
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2603 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2653
>gi|402868560|ref|XP_003898364.1| PREDICTED: DNA polymerase zeta catalytic subunit [Papio anubis]
Length = 3066
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2255 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2311
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2312 PDPEFDPICALFYCISSDAPLPDTEKTELTGVIVIDKDK--------------------- 2350
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2351 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2402
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2403 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2462
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2463 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2522
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2523 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2582
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2583 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2642
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2643 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2702
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2703 KAYKQDRALSRM 2714
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2602 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2652
>gi|332213029|ref|XP_003255622.1| PREDICTED: DNA polymerase zeta catalytic subunit [Nomascus
leucogenys]
Length = 3051
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2178 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2234
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2235 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2273
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2274 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2325
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2326 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSCTMSEINIVGRITL 2385
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2386 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2445
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2446 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2505
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2506 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2565
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2566 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2625
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2626 KAYKQDRALSRM 2637
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2525 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2575
>gi|297291939|ref|XP_001086055.2| PREDICTED: DNA polymerase zeta catalytic subunit [Macaca mulatta]
Length = 3064
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2254 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2310
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2311 PDPEFDPICALFYCISSDAPLPDTEKTELTGVIVIDKDK--------------------- 2349
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2350 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIAHIIKRYDPDILLGY 2401
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2402 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2461
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2462 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2521
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2522 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2581
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2582 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2641
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2642 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2701
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2702 KAYKQDRALSRM 2713
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2601 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2651
>gi|355748973|gb|EHH53456.1| hypothetical protein EGM_14100, partial [Macaca fascicularis]
Length = 3081
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2208 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2264
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2265 PDPEFDPICALFYCISSDAPLPDTEKTELTGVIVIDKDK--------------------- 2303
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2304 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2355
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2356 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2415
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2416 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2475
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2476 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2535
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2536 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2595
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2596 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2655
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2656 KAYKQDRALSRM 2667
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2555 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2605
>gi|355562137|gb|EHH18769.1| hypothetical protein EGK_15435, partial [Macaca mulatta]
Length = 3081
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2208 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2264
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2265 PDPEFDPICALFYCISSDAPLPDTEKTELTGVIVIDKDK--------------------- 2303
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2304 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIAHIIKRYDPDILLGY 2355
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2356 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2415
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2416 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2475
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2476 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2535
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2536 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2595
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2596 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2655
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2656 KAYKQDRALSRM 2667
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2555 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2605
>gi|344264026|ref|XP_003404095.1| PREDICTED: DNA polymerase zeta catalytic subunit [Loxodonta africana]
Length = 3158
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 333/488 (68%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2285 VNTPKK---ETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLE 2341
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2342 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2384
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P + I + G LE + ++EK LF + ++++DPDIL+GYEI+
Sbjct: 2385 -QDIRYQAP-----FLIRSGITG--LEVTYAADEKTLFQEIADIIKRYDPDILLGYEIQM 2436
Query: 382 LSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +NLWR
Sbjct: 2437 HSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAADRDDYGSDTMSEINIVGRITLNLWR 2496
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV+L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2497 IMRNEVSLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNL 2556
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+QR+
Sbjct: 2557 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQ 2616
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2617 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKF 2676
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 2677 GCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2736
Query: 676 FSESLRNL 683
+L +
Sbjct: 2737 QDRALSRM 2744
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2632 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLR 2682
>gi|345778314|ref|XP_539084.3| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 3136
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/521 (42%), Positives = 341/521 (65%), Gaps = 42/521 (8%)
Query: 177 THPDCSK-SSQIDFNPDLFKSFIRKQ-------LETPKRRICDSYAIDAMTPDTTGDYQM 228
T P K S + N D F+ + Q + TPK+ ++ ID + + T +++
Sbjct: 2230 TEPKTQKLSHKKGSNTDTFRRILLTQAKNQFAAVNTPKK---ETSQIDGPSLNNTYGFKV 2286
Query: 229 GLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVG 288
+ NL E + E LT+++VE+HA +R L+PDP +D + A+FY
Sbjct: 2287 SVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFY-------------- 2332
Query: 289 IILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
I ++ LP+ + V ++ + S+ +++R P +LI I LE
Sbjct: 2333 --CISSDTPLPDTDKTELTGVIVIDKDKTVSS--QDIRYQTP-LLIRSGITG------LE 2381
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE- 407
+ +EK LF + ++++DPDIL+GYEI+ SWGYLL+R L ++L Q +SR+ +
Sbjct: 2382 VTYAPDEKALFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLGQMISRVPDD 2441
Query: 408 -VEKR-NSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
+E R RD+ + +++ + GRI +NLWR++R+EV L +YTFEN+ +HVLH+R PL
Sbjct: 2442 KIENRFAPERDDYGSETMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQRFPL 2501
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++++L+ W++++T LY+W V+HY+ RV G ++++EQLD IG+TSEMARLFGIQF VL
Sbjct: 2502 FTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVL 2561
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RGSQ+RVES+MLR+++ N++ V+PS++QR+ MRAP+ +PLI+EPESR Y++ ++VLDF
Sbjct: 2562 TRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDF 2621
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
QSLYPS++IAYNYCFSTCLG VE+LG D F FGC L V L +++ ++T+SP+G+A
Sbjct: 2622 QSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQIRHDITVSPNGIA 2681
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
FV S+R G+LP+ML+EIL TRLMVKQSMK YK +L +
Sbjct: 2682 FVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYKQDRALSRM 2722
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2610 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2660
>gi|301789010|ref|XP_002929922.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Ailuropoda
melanoleuca]
Length = 3129
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 330/488 (67%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2258 VNTPKK---ETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLE 2314
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2315 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2357
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I LE + +EK LF + ++++DPDIL+GYEI+
Sbjct: 2358 -QDIRYQTP-LLIRSGITG------LEVTYAPDEKALFQEIADIIKRYDPDILLGYEIQM 2409
Query: 382 LSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L +NL Q +SR+ + +E R RD+ + +++ + GRI +NLWR
Sbjct: 2410 HSWGYLLQRAAALSVNLCQMISRVPDDKIENRFAPERDDYGSDTMSEINIVGRITLNLWR 2469
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2470 IMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 2529
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 2530 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2589
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2590 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2649
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 2650 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2709
Query: 676 FSESLRNL 683
+L +
Sbjct: 2710 QDRALSRM 2717
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2605 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2655
>gi|2665742|gb|AAB88486.1| DNA polymerase zeta [Homo sapiens]
Length = 3052
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2179 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2235
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2236 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2274
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2275 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2326
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2327 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2386
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2387 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2446
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2447 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2506
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2507 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2566
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2567 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2626
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2627 KAYKQDRALSRM 2638
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2526 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
>gi|281347901|gb|EFB23485.1| hypothetical protein PANDA_020229 [Ailuropoda melanoleuca]
Length = 3134
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 330/488 (67%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2263 VNTPKK---ETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLE 2319
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2320 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2362
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I LE + +EK LF + ++++DPDIL+GYEI+
Sbjct: 2363 -QDIRYQTP-LLIRSGITG------LEVTYAPDEKALFQEIADIIKRYDPDILLGYEIQM 2414
Query: 382 LSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L +NL Q +SR+ + +E R RD+ + +++ + GRI +NLWR
Sbjct: 2415 HSWGYLLQRAAALSVNLCQMISRVPDDKIENRFAPERDDYGSDTMSEINIVGRITLNLWR 2474
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2475 IMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 2534
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 2535 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2594
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2595 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2654
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 2655 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2714
Query: 676 FSESLRNL 683
+L +
Sbjct: 2715 QDRALSRM 2722
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2610 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2660
>gi|3378172|gb|AAC28460.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
Length = 3052
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2179 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2235
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2236 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2274
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2275 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2326
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2327 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2386
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2387 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2446
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2447 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2506
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2507 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2566
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2567 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2626
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2627 KAYKQDRALSRM 2638
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2526 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
>gi|9957534|gb|AAG09402.1|AF179428_1 DNA polymerase zeta catalytic subunit variant 1 [Homo sapiens]
gi|9957536|gb|AAG09403.1|AF179429_1 DNA polymerase zeta catalytic subunit variant 2 [Homo sapiens]
gi|50345290|gb|AAT74627.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens]
gi|119568678|gb|EAW48293.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast), isoform
CRA_b [Homo sapiens]
Length = 3052
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2179 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2235
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2236 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2274
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2275 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2326
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2327 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2386
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2387 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2446
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2447 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2506
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2507 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2566
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2567 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2626
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2627 KAYKQDRALSRM 2638
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2526 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
>gi|410225886|gb|JAA10162.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410267062|gb|JAA21497.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410306870|gb|JAA32035.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
gi|410353579|gb|JAA43393.1| REV3-like, catalytic subunit of DNA polymerase zeta [Pan troglodytes]
Length = 3130
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2257 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2313
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2314 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2352
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2353 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2404
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2405 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2464
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2465 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2524
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2525 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2584
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2585 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2644
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2645 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2704
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2705 KAYKQDRALSRM 2716
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2604 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
>gi|153792012|ref|NP_002903.3| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|143811385|sp|O60673.2|DPOLZ_HUMAN RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3-like; Short=REV3-like;
Short=hREV3
gi|225000508|gb|AAI72423.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast)
[synthetic construct]
Length = 3130
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2257 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2313
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2314 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2352
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2353 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2404
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2405 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2464
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2465 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2524
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2525 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2584
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2585 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2644
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2645 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2704
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2705 KAYKQDRALSRM 2716
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2604 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
>gi|5107941|gb|AAD40184.1|AF157476_1 DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3063675|gb|AAC24357.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3243260|gb|AAC24009.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|119568679|gb|EAW48294.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast), isoform
CRA_c [Homo sapiens]
Length = 3130
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2257 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2313
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2314 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2352
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2353 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2404
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2405 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2464
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2465 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2524
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2525 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2584
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2585 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2644
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2645 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2704
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2705 KAYKQDRALSRM 2716
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2604 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
>gi|397503275|ref|XP_003822254.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 2 [Pan
paniscus]
gi|397503277|ref|XP_003822255.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 3 [Pan
paniscus]
Length = 3052
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2179 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2235
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2236 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2274
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2275 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2326
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2327 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2386
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2387 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2446
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2447 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2506
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2507 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2566
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2567 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2626
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2627 KAYKQDRALSRM 2638
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2526 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2576
>gi|431838720|gb|ELK00650.1| DNA polymerase zeta catalytic subunit [Pteropus alecto]
Length = 3129
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 330/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2256 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2312
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRK----VGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P D G+I+I ++ VSN+
Sbjct: 2313 PDPEFDPICALFYCISSDTPLPDTDKTELTGVIVIDKDKT-------------VSNQ--- 2356
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2357 ------DIRYQTP-LLIRSGITR------LEVTYAADEKALFQEITAIIKRYDPDILLGY 2403
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L +SR+ + + N + RD+ + +++ + GRI +
Sbjct: 2404 EIQMHSWGYLLQRAAALSVDLCHMISRVPDDKTENRFAAERDDYGSDTMSEINIVGRITL 2463
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2464 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRV 2523
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2524 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2583
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2584 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2643
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVKQSM
Sbjct: 2644 EFKFGCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSM 2703
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2704 KAYKQDRALSRM 2715
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2603 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2653
>gi|440910569|gb|ELR60356.1| DNA polymerase zeta catalytic subunit, partial [Bos grunniens mutus]
Length = 3093
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/480 (44%), Positives = 327/480 (68%), Gaps = 34/480 (7%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2220 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLEEAKALHEIQNLTLISVELHARTRRDLE 2276
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2277 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2319
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I L+ + ++EK LF ++++DPDILIGYEI+
Sbjct: 2320 -QDIRYQTP-LLIRSGITG------LQVTYAADEKTLFQEIANIIKRYDPDILIGYEIQM 2371
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + + N + RDE + +++ + GRI +NLWR
Sbjct: 2372 HSWGYLLQRAAALSVDLCQMISRVPDDKTENRFAAERDEYGSDVMSEINIVGRITLNLWR 2431
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2432 IMRNEVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 2491
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 2492 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2551
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2552 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2611
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVK+SMK YK
Sbjct: 2612 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2671
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2567 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2617
>gi|397503273|ref|XP_003822253.1| PREDICTED: DNA polymerase zeta catalytic subunit isoform 1 [Pan
paniscus]
Length = 3130
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 331/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2257 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2313
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2314 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2352
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2353 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2404
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2405 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2464
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2465 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2524
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2525 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2584
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2585 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2644
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2645 EFKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2704
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2705 KAYKQDRALSRM 2716
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2604 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2654
>gi|444709084|gb|ELW50116.1| DNA polymerase zeta catalytic subunit [Tupaia chinensis]
Length = 3196
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 334/500 (66%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2323 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2379
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2380 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2418
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P + + S L+ + ++EK LF ++++DPDIL+GY
Sbjct: 2419 -TVFSQDLRYQTP-------LLSRSGITGLQVTYAADEKALFQEIANIIKRYDPDILLGY 2470
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKRNS-SRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R S +DE + +++ + GRI +
Sbjct: 2471 EIQMHSWGYLLQRAAALNVDLCQMISRVPDDKIENRFSVEKDEYASDTMSEINIVGRITL 2530
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +H+LH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2531 NLWRIMRNEVALTNYTFENVSFHILHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2590
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2591 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2650
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2651 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2710
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2711 EFKFGCTSLRVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2770
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2771 KAYKQDRALSR--MLNARQL 2788
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2670 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2720
>gi|329663970|ref|NP_001193101.1| DNA polymerase zeta catalytic subunit [Bos taurus]
Length = 3133
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/480 (44%), Positives = 327/480 (68%), Gaps = 34/480 (7%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2260 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLEEAKALHEIQNLTLISVELHARTRRDLE 2316
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2317 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2359
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I L+ + ++EK LF ++++DPDILIGYEI+
Sbjct: 2360 -QDIRYQTP-LLIRSGITG------LQVTYAADEKTLFQEIANIIKRYDPDILIGYEIQM 2411
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + + N + RDE + +++ + GRI +NLWR
Sbjct: 2412 HSWGYLLQRAAALSVDLCQMISRVPDDKTENRFAAERDEYGSDVMSEINIVGRITLNLWR 2471
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2472 IMRNEVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 2531
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 2532 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2591
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2592 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2651
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVK+SMK YK
Sbjct: 2652 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2711
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2607 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2657
>gi|296484157|tpg|DAA26272.1| TPA: DNA-directed DNA polymerase delta 1-like [Bos taurus]
Length = 3133
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/480 (44%), Positives = 327/480 (68%), Gaps = 34/480 (7%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2260 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLEEAKALHEIQNLTLISVELHARTRRDLE 2316
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2317 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2359
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I L+ + ++EK LF ++++DPDILIGYEI+
Sbjct: 2360 -QDIRYQTP-LLIRSGITG------LQVTYAADEKTLFQEIANIIKRYDPDILIGYEIQM 2411
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + + N + RDE + +++ + GRI +NLWR
Sbjct: 2412 HSWGYLLQRAAALSVDLCQMISRVPDDKTENRFAAERDEYGSDVMSEINIVGRITLNLWR 2471
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2472 IMRNEVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 2531
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 2532 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2591
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2592 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2651
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVK+SMK YK
Sbjct: 2652 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2711
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2607 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2657
>gi|426234529|ref|XP_004011248.1| PREDICTED: DNA polymerase zeta catalytic subunit [Ovis aries]
Length = 3056
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/488 (43%), Positives = 328/488 (67%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2183 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2239
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 2240 PDPEFDPICALFY----------------CISSDTPLPDTDKTELTGVIVIDKDKTVSS- 2282
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I Y ++EK LF ++++DPDIL+GYEI+
Sbjct: 2283 -QDIRYQTP-LLIRSGITGLQVTY------AADEKALFQETANIIKRYDPDILLGYEIQM 2334
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + + N + RDE + +++ + GRI +NLWR
Sbjct: 2335 HSWGYLLQRAAALSVDLCQMISRVPDDKTENRFAAERDEYGSDTMSEINIVGRITLNLWR 2394
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 2395 IMRNEVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 2454
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 2455 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQ 2514
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 2515 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 2574
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVK+SMK YK
Sbjct: 2575 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKRSMKAYK 2634
Query: 676 FSESLRNL 683
+L +
Sbjct: 2635 QDRALSRM 2642
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2530 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2580
>gi|363732318|ref|XP_426179.3| PREDICTED: DNA polymerase zeta catalytic subunit [Gallus gallus]
Length = 3154
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/488 (43%), Positives = 325/488 (66%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
L PKR ++ I+ + + T +++ + NL E S E +LT++++E+HA +R L+
Sbjct: 2281 LGAPKR---ETSQIEGPSLNNTYGFKVSVQNLQEAKSLHEVQHLTLISMELHARTRRDLE 2337
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY + ++ LP K I V + S+
Sbjct: 2338 PDPEFDPICALFY----------------CVSSDTALPNTDKKEITGAIVIDSDRTLSS- 2380
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+ R P + T S LE + ++E+ LF + V+++DPDIL+GYE++
Sbjct: 2381 -QGSRDQAP-------LLTRSGITGLEVSYATDERTLFQEVVNIVKRYDPDILLGYEVQM 2432
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN------TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + K N E+ +++ + GRI++N+WR
Sbjct: 2433 HSWGYLLQRAAALNVDLCQMISRVPDDNKENRFAAELDEYGSDTMSEINIVGRIILNIWR 2492
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EVNL +YTFEN+ +HVLH+R PL ++++L+ W++++ +Y+W V+HY+ RV G +
Sbjct: 2493 MMRNEVNLMNYTFENVGFHVLHQRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVHGNL 2552
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+L+++LD I RTSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+QRA
Sbjct: 2553 QLLQKLDLIDRTSEMARLFGIQFLHVLTRGSQYRVESMMLRVAKPMNYIPVTPSIQQRAQ 2612
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
M+AP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D+F F
Sbjct: 2613 MKAPQCVPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGPVENLGKYDAFKF 2672
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SPSGVAFV S+R G+LP+ML+EIL TR+MVKQSMK YK
Sbjct: 2673 GCTSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYK 2732
Query: 676 FSESLRNL 683
+++ +
Sbjct: 2733 HDKAITRM 2740
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D+F FGC + R
Sbjct: 2628 RFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGPVENLGKYDAFKFGCTSLR 2678
>gi|354485585|ref|XP_003504964.1| PREDICTED: DNA polymerase zeta catalytic subunit [Cricetulus griseus]
Length = 3050
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 333/500 (66%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2177 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2233
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2234 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2276
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2277 -----QDIRYQTP-LLIRSGITG------LEITYAADEKALFQEITNIIKRYDPDILLGY 2324
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2325 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2384
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2385 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2444
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR ++ N++ V+PS++
Sbjct: 2445 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRFAKPMNYIPVTPSVQ 2504
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG +
Sbjct: 2505 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYE 2564
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV SIR G+LP+ML+EIL TR MVKQSM
Sbjct: 2565 EFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSIRKGVLPRMLEEILKTRFMVKQSM 2624
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK +L MLN+ L
Sbjct: 2625 KAYKQDRALSR--MLNARQL 2642
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG + F FGC + R
Sbjct: 2524 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYEEFKFGCTSLR 2574
>gi|326916059|ref|XP_003204329.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Meleagris
gallopavo]
Length = 3126
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/509 (42%), Positives = 332/509 (65%), Gaps = 42/509 (8%)
Query: 189 FNPD-----LFKSFIRKQ---LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHV 240
NPD L + ++ Q L PKR ++ I+ + + T +++ + NL E S
Sbjct: 2291 INPDGLRRVLLTTQMKNQFAALGAPKR---ETSQIEGPSLNNTYGFKVSVQNLQEAKSLH 2347
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E +LT++++E+HA +R L+PDP +D + A+FY I ++ LP
Sbjct: 2348 EVQHLTLISMELHARTRRDLEPDPEFDPICALFY----------------CISSDTALPN 2391
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
K I V + S+ + R P + T S LE + ++E+ LF
Sbjct: 2392 TDKKEITGAIVIDSDRTLSS--QGSRDQAP-------LLTRSGITGLEVSYATDERTLFQ 2442
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN 420
+ V+++DPDIL+GYE++ SWGYLL+R L ++L Q +SR+ + K N E+
Sbjct: 2443 EVVNIVKRYDPDILLGYEVQMHSWGYLLQRAAALNVDLCQMISRVPDDNKENRFAAELDE 2502
Query: 421 ------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+++ + GRI++N+WR++R+EVNL +YTFEN+ +HVLH+R PL ++++L+ W+++
Sbjct: 2503 YGSDTMSEINIVGRIILNIWRMMRNEVNLMNYTFENVGFHVLHQRFPLFTFRVLSDWFDN 2562
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ +Y+W V+HY+ RV G ++L+ +LD I RTSEMARLFGIQF VL+RGSQ+RVES+M
Sbjct: 2563 KADVYRWKMVDHYVSRVHGNLQLLRKLDLIDRTSEMARLFGIQFLHVLTRGSQYRVESMM 2622
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
LR+++ N++ V+PSI+QRA M+AP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYN
Sbjct: 2623 LRVAKPMNYIPVTPSIQQRAQMKAPQCVPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYN 2682
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YCFSTCLG VE+LG D+F FGC L V L +++ ++T+SPSGVAFV S+R G+LP
Sbjct: 2683 YCFSTCLGPVENLGKYDAFKFGCTSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLP 2742
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML+EIL TR+MVKQSMK YK +++ +
Sbjct: 2743 RMLEEILKTRIMVKQSMKAYKHDKAISRM 2771
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D+F FGC + R
Sbjct: 2659 RFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGPVENLGKYDAFKFGCTSLR 2709
>gi|149032985|gb|EDL87826.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S.
cerevisiae) [Rattus norvegicus]
Length = 3054
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/500 (43%), Positives = 334/500 (66%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2181 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2237
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2238 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2280
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI + LE + ++EK LF ++++DPDIL+GY
Sbjct: 2281 -----QDIRCQTP-LLIRSGVTG------LEVTYAADEKALFQEVTNIMKRYDPDILLGY 2328
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2329 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2388
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2389 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2448
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2449 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2508
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG +E+LG D
Sbjct: 2509 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYD 2568
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2569 EFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2628
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K Y+ +L MLN+ L
Sbjct: 2629 KAYRQDRALSR--MLNARQL 2646
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG +E+LG D F FGC + R
Sbjct: 2528 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYDEFKFGCTSLR 2578
>gi|410041139|ref|XP_003950950.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
[Pan troglodytes]
Length = 3130
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 330/492 (67%), Gaps = 42/492 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2257 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2313
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2314 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2352
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2353 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2404
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2405 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2464
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2465 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2524
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2525 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2584
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D
Sbjct: 2585 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYD 2644
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2645 EXKFGCTSLRVPPDLLYQVRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2704
Query: 672 KEYKFSESLRNL 683
K YK +L +
Sbjct: 2705 KAYKQDRALSRM 2716
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D FGC + R
Sbjct: 2604 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEXKFGCTSLR 2654
>gi|145312253|ref|NP_001077435.1| DNA polymerase zeta catalytic subunit [Rattus norvegicus]
Length = 3132
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/500 (43%), Positives = 334/500 (66%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2259 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2315
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2316 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2358
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI + LE + ++EK LF ++++DPDIL+GY
Sbjct: 2359 -----QDIRCQTP-LLIRSGVTG------LEVTYAADEKALFQEVTNIMKRYDPDILLGY 2406
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2407 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2466
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2467 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2526
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2527 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2586
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG +E+LG D
Sbjct: 2587 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYD 2646
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2647 EFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSM 2706
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K Y+ +L MLN+ L
Sbjct: 2707 KAYRQDRALSR--MLNARQL 2724
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG +E+LG D F FGC + R
Sbjct: 2606 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKYDEFKFGCTSLR 2656
>gi|432107870|gb|ELK32927.1| DNA polymerase zeta catalytic subunit [Myotis davidii]
Length = 3123
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 338/510 (66%), Gaps = 37/510 (7%)
Query: 183 KSSQIDFNPDLFKSFIRKQ---LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSH 239
K S D +F + + Q + TPK+ ++ ID + + T +++ + NL E +
Sbjct: 2194 KGSNTDTRRRIFLTEAKNQFAAVNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKAL 2250
Query: 240 VENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELP 299
E LT+++VE+HA +R L+PDP +D + A+FY I ++ LP
Sbjct: 2251 HEIQNLTLISVELHARTRRDLEPDPEFDPICALFY----------------CISSDTPLP 2294
Query: 300 EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
+ V ++ + S+ +++R P +LI I LE + ++EK LF
Sbjct: 2295 NTDKTELTGVIVIDKDKTVSS--QDIRYQTP-LLIRSGITR------LEVTYAADEKGLF 2345
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRD 416
+ ++++DPDIL+GYEI+ SWGYLL+R L ++L Q +SR+ + +E R + RD
Sbjct: 2346 QEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERD 2405
Query: 417 EVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+ + +++ + GRI +NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++
Sbjct: 2406 DYGSDTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFD 2465
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
++T LY+W V+HY+ RV G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+
Sbjct: 2466 NKTDLYRWKMVDHYISRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESM 2525
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
MLR+++ N++ V+P+++QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAY
Sbjct: 2526 MLRIAKPMNYIPVTPNVQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAY 2585
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYCFSTCLG VE+LG D F FGC L V L +++ ++T+SP+G+AFV S+R G+L
Sbjct: 2586 NYCFSTCLGHVENLGKFDEFKFGCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVL 2645
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
P ML+EIL TRLMVKQSMK YK +L +
Sbjct: 2646 PIMLEEILKTRLMVKQSMKAYKQDRALSRM 2675
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2563 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLR 2613
>gi|351697832|gb|EHB00751.1| DNA polymerase zeta catalytic subunit [Heterocephalus glaber]
Length = 3119
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 335/500 (67%), Gaps = 44/500 (8%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2246 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2302
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2303 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVSG----------------- 2345
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2346 -----QDIRYQTP-LLIRSGITG------LEVTYAADEKALFQEITNIIKRYDPDILLGY 2393
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2394 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2453
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +H+LH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2454 NLWRIMRNEVALTNYTFENVSFHILHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2513
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PSI+
Sbjct: 2514 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQ 2573
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG +
Sbjct: 2574 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYE 2633
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F FGC L V L +++ ++T+SP+GVAFV S+R G+LP+ML+EIL TR MVKQS+
Sbjct: 2634 EFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSV 2693
Query: 672 KEYKFSESLRNLTMLNSMLL 691
K YK ++L MLN+ L
Sbjct: 2694 KAYKQDKALSR--MLNARQL 2711
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG + F FGC + R
Sbjct: 2593 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYEEFKFGCTSLR 2643
>gi|410928855|ref|XP_003977815.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Takifugu
rubripes]
Length = 2944
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/559 (40%), Positives = 341/559 (61%), Gaps = 57/559 (10%)
Query: 155 CIASRESNQ-------SPPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPKR 207
C+ ++E N+ S PN E P CS + I +P + R+ P +
Sbjct: 1997 CVTNKEENETSPLLINSTPNSKQQRNREEMEPLCS--TPISEDPACRRLQQRRSQTDPLK 2054
Query: 208 RIC-----------------DSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAV 250
R+ D+ I+ + T +++ + NL + + E +LT++ +
Sbjct: 2055 RVLLTTQMKNQFAALNLPKKDNSQIEGPSISNTYGFKISMRNLQDAKALHEVQHLTLMGM 2114
Query: 251 EIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNF 310
E+HA +R L+PDP +D + A+FY I ++ LP+ +
Sbjct: 2115 ELHARTRRDLEPDPEFDPICALFY----------------CISSDASLPDTIGTQLTGAI 2158
Query: 311 VSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWD 370
V N R+ P +L+ + L+ +V+NEKELF + +R++D
Sbjct: 2159 VINGD--HQGHDRGPRRAAP-LLVRSGVSG------LQVTYVTNEKELFQELVTIMRRFD 2209
Query: 371 PDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQ 424
PDIL+GYE++ SWGYL++R VLG+ L Q+LSR+ N + +DE T++
Sbjct: 2210 PDILVGYEVQMRSWGYLVQRAAVLGVGLCQQLSRVPGDNSENRFAADQDEYGADTMTEIH 2269
Query: 425 MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTV 484
+ GRI +NLWR+++ EV L +Y FEN+ +HVLH+R PL+S + L+ W++H + L++W V
Sbjct: 2270 IVGRITLNLWRVMKTEVTLNNYNFENVAFHVLHQRFPLYSQRTLSDWFDHNSDLFRWKMV 2329
Query: 485 EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFV 544
+ Y+ RV GI++L+++ D IGRTSE+AR+FGIQF+ VL+RGSQ+RVES+MLR+++ N++
Sbjct: 2330 DCYISRVQGIMQLLQEQDIIGRTSELARVFGIQFFHVLTRGSQYRVESMMLRVAKPLNYI 2389
Query: 545 AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 604
V+PS++QRAH RAP+ LPL++EPESR Y++ ++VLDFQSLYPS+IIAYNYCFSTCLG V
Sbjct: 2390 PVTPSVQQRAHQRAPQCLPLVMEPESRFYSNSVVVLDFQSLYPSIIIAYNYCFSTCLGHV 2449
Query: 605 EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTR 664
+ LG D F FGC L V L +L+ ++T+SP+G+AFV S+R GILP ML+EIL+TR
Sbjct: 2450 DSLGTPDEFKFGCTSLRVPHDLLYQLRNDITVSPNGIAFVKASVRKGILPSMLEEILNTR 2509
Query: 665 LMVKQSMKEYKFSESLRNL 683
+MVKQSMK YK ++L L
Sbjct: 2510 IMVKQSMKMYKQDKTLMRL 2528
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS+IIAYNYCFSTCLG V+ LG D F FGC + R
Sbjct: 2416 RFYSNSVVVLDFQSLYPSIIIAYNYCFSTCLGHVDSLGTPDEFKFGCTSLR 2466
>gi|355716165|gb|AES05523.1| REV3-like, catalytic subunit of DNA polymerase zeta [Mustela
putorius furo]
Length = 1155
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 330/488 (67%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 320 VNTPKK---ETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLE 376
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I ++ LP+ + V ++ + S+
Sbjct: 377 PDPEFDPICALFY----------------CITSDTPLPDTDKTELTGVIVIDKDKTVSS- 419
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+++R P +LI I LE + +EK LF + ++++DPDIL+GYEI+
Sbjct: 420 -QDIRYQTP-LLIRSGITG------LEVTYAPDEKALFQEITDIIKRYDPDILLGYEIQM 471
Query: 382 LSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + +E R RD+ + +++ + GRI +NLWR
Sbjct: 472 HSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAPERDDYGSDTMSEINIVGRITLNLWR 531
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +
Sbjct: 532 IMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNL 591
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ ++PS++QR+
Sbjct: 592 QMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPLTPSVQQRSQ 651
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F F
Sbjct: 652 MRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKF 711
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 712 GCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 771
Query: 676 FSESLRNL 683
+L +
Sbjct: 772 QDRALSRM 779
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 667 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 717
>gi|449497906|ref|XP_002191467.2| PREDICTED: DNA polymerase zeta catalytic subunit [Taeniopygia
guttata]
Length = 3147
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 324/488 (66%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
L PK+ ++ I+ + + T +++ ++NL E S E +LT++++E+HA +R L+
Sbjct: 2274 LGAPKK---ETSQIEGPSLNNTYGFKVSVENLQEAKSLHEVQHLTLISMELHARTRRDLE 2330
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY I +S LP K I V + S+
Sbjct: 2331 PDPEFDPICALFY----------------CISSDSALPNTDKKEITGAIVIDRGRTLSS- 2373
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+ R P + T S LE + ++E+ LF + V+++DPDIL+GYE++
Sbjct: 2374 -QGSRDQAP-------LLTRSGVTGLEVSYATDERTLFQEVVNIVKRYDPDILLGYEVQM 2425
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN------TQLQMPGRIVINLWR 435
SWGYLL+R L ++L Q +SR+ + K N E+ +++ + GRIV+N+WR
Sbjct: 2426 HSWGYLLQRAEALNVDLCQMISRVPDKSKENRFATELDEYGADTMSEINIVGRIVLNIWR 2485
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
++RHEV L +YTFEN+ +HVLH R PL ++++L+ W++++ +Y+W V+HY+ RV G +
Sbjct: 2486 MMRHEVTLTNYTFENVGFHVLHHRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVRGNL 2545
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
L+E+LD I RTSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++AV+PS++QRA
Sbjct: 2546 LLLEKLDLIDRTSEMARLFGIQFLHVLTRGSQYRVESVMLRIAKPMNYIAVTPSVQQRAQ 2605
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
M+AP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D+F F
Sbjct: 2606 MKAPQCVPLIMEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDAFKF 2665
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +++ ++T+SPSGVAFV S+R G+LP+ML+EIL TR+MVKQSMK YK
Sbjct: 2666 GCTSLRVPPDLLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYK 2725
Query: 676 FSESLRNL 683
+++ +
Sbjct: 2726 HDKAVTRM 2733
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D+F FGC + R
Sbjct: 2621 RFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDAFKFGCTSLR 2671
>gi|312378973|gb|EFR25393.1| hypothetical protein AND_09281 [Anopheles darlingi]
Length = 878
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/450 (50%), Positives = 301/450 (66%), Gaps = 48/450 (10%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-CPPEEDRK---VGIILIGQESELP 299
YLT+L++EIH +R L+P+P D + AIFY ++ PP+ R GIIL +++
Sbjct: 16 YLTILSLEIHVQTRGDLRPNPNTDPIAAIFYRIHNDVPPDHPRASSVCGIILNQEQTTTG 75
Query: 300 EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
E D + GY+ Y+ + V E+EL+
Sbjct: 76 E--------------------------GGDGNTAPGYKYNQCP--YVADVVVVQGERELY 107
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK 419
F+ + WDPDI GYEIE++SWGY++ERGYVL +NL + LSR+ +EK + S +E +
Sbjct: 108 EKFLLLIAFWDPDIFTGYEIESVSWGYVIERGYVLEMNLMKMLSRVPTLEKVHVSEEEQQ 167
Query: 420 --------NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
+ L++PGRI++++WRL+RHE+ L SYTFEN++YH+LH R+P HS++ LT
Sbjct: 168 ELLEMHEYSAGLKIPGRILLDIWRLMRHEIALTSYTFENVVYHILHRRVPCHSFRQLTRV 227
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
W +W+ +++YL RV G ++ QLD IGRT+E+A+LFGIQFYEVLSRGSQFRVE
Sbjct: 228 WSKPCT--RWIVLDYYLERVNGNFAILHQLDLIGRTAELAKLFGIQFYEVLSRGSQFRVE 285
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S+MLR+++ NFV+VSPSI+QRAHMRAPE LPLI+EP SR Y DPIIVLDFQSLYPSVII
Sbjct: 286 SMMLRIAKPGNFVSVSPSIQQRAHMRAPEYLPLIMEPNSRFYADPIIVLDFQSLYPSVII 345
Query: 592 AYNYCFSTCLGRVEHLGVSD----SFPFGCIDLNVSIRSLKK-LQQNL-TISPSGVAFVD 645
AYNYCFSTCLGR+EHLGV + F FG L V + L+ L +NL T SP G+AFV
Sbjct: 346 AYNYCFSTCLGRIEHLGVGEESVREFEFGASHLRVPRKMLQVLLDKNLITCSPCGIAFVK 405
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
K +R G+LP+ML EIL+TRLMVK+SMK +K
Sbjct: 406 KRVREGVLPRMLSEILNTRLMVKKSMKLHK 435
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 41/50 (82%), Gaps = 4/50 (8%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD----SFPFG 154
R Y DPIIVLDFQSLYPSVIIAYNYCFSTCLGR+EHLGV + F FG
Sbjct: 325 RFYADPIIVLDFQSLYPSVIIAYNYCFSTCLGRIEHLGVGEESVREFEFG 374
>gi|380028350|ref|XP_003697867.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis florea]
Length = 1818
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/438 (48%), Positives = 287/438 (65%), Gaps = 44/438 (10%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR----KVGIILIGQESELP 299
YLT+LA+EIH I+R PDP +D ++AIFY +Y P + + G+IL+
Sbjct: 986 YLTILAIEIHVITRGKFLPDPNHDSIEAIFYAIYNDAPLSSKIEQIEHGVILLNSS---- 1041
Query: 300 EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
+ N K I+N+ Y T++ Y VS+E++L
Sbjct: 1042 -----------IKNSK------IKNI----------YSSNTYTTSY------VSSEEDLL 1068
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-NLNQELSRITEVE--KRNSSRD 416
+ I +R DPDILIG+EIE LSWGY+ R +GL N ++SRI+ + + D
Sbjct: 1069 NSLIILIRHCDPDILIGWEIEFLSWGYIFHRASHIGLHNFMWQISRISNAIPISKGQTFD 1128
Query: 417 EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRT 476
+ + Q+PGRI+ ++WR++RHEV L +YTFEN+MY+V+HERI ++++LT WW H
Sbjct: 1129 KDNFSDAQIPGRIIFDVWRVMRHEVALLNYTFENVMYNVMHERISCPTFQMLTEWWNHEN 1188
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
+W + HY+IRV G +R++ LD IG+T E ARLFGIQFYEV SRGSQFRVES+MLR
Sbjct: 1189 MTMQWRVITHYIIRVVGTLRILIHLDIIGQTCEHARLFGIQFYEVFSRGSQFRVESMMLR 1248
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
L++ N++ VSPS++QRA MRAPESLPLI+EP+S YTDP++VLDFQSLYPS+IIAYNYC
Sbjct: 1249 LAKPLNYIPVSPSVQQRARMRAPESLPLIMEPQSAFYTDPLVVLDFQSLYPSIIIAYNYC 1308
Query: 597 FSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
FSTCLGRVEH+G + F FG L + + +KL + +P GVAFV IR GILP+M
Sbjct: 1309 FSTCLGRVEHIGQYEPFEFGTTTLKIKKNTAQKLVGKVNFAPCGVAFVKPEIRMGILPRM 1368
Query: 657 LQEILDTRLMVKQSMKEY 674
L EIL+TRLM+K+SMK Y
Sbjct: 1369 LSEILNTRLMIKKSMKLY 1386
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 154
M P S+ YTDP++VLDFQSLYPS+IIAYNYCFSTCLGRVEH+G + F FG
Sbjct: 1278 MEPQSA----FYTDPLVVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGQYEPFEFG 1328
>gi|307187392|gb|EFN72515.1| DNA polymerase zeta catalytic subunit [Camponotus floridanus]
Length = 2051
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/494 (44%), Positives = 311/494 (62%), Gaps = 59/494 (11%)
Query: 198 IRKQLETP--------KRRICDSYA-IDAMTPDTTGDY-QMGLDNLNEVTSHVENYYLTV 247
++K LE P ++++ SY ID ++ ++ + L N+ +T+H YLT+
Sbjct: 1158 LKKVLENPLLHRQNKMQQQLGVSYGQIDCLSKESCSNVSNENLQNVRAITAH---QYLTL 1214
Query: 248 LAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQ 307
L++E+H ++R L PDP YD + A+FY +Y P
Sbjct: 1215 LSLEVHTVTREDLLPDPQYDSIAALFYAIYNDIP-------------------------- 1248
Query: 308 MNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVR 367
MN +NE+ I N P + + S + +V+ E+++F+ FI+ +
Sbjct: 1249 MN--TNEQIEHGAIIVNSNSISPRLN-----KIHSASVMCPILYVATEQDMFNSFIKLIE 1301
Query: 368 QWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEV 418
Q +PDIL+G+E+E LSW Y+ +R L LNLN RI++V + S +D++
Sbjct: 1302 QHNPDILLGWEVEALSWSYIFQRA--LYLNLNNFPIRISKVPYMQVFSKSDAHISEKDDI 1359
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
+++++ GR ++++WR++RHE L +YTFEN+M+HVLHERIP S+K L+ WW+H + +
Sbjct: 1360 --SEIKVLGRNILDVWRIMRHEAALLTYTFENVMHHVLHERIPCPSFKTLSTWWKHESMI 1417
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
K + HY+IRV G +L+ LD IGRT E ARLFGIQFYEV SRGSQFRVES+MLRL+
Sbjct: 1418 IKSRVIHHYIIRVVGTFKLLNHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLA 1477
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ N++ +SPSI QRA MRAPE LPLI+EPES YTDP+IVLDFQSLYPS+IIAYNYCFS
Sbjct: 1478 KPMNYIPISPSIHQRAKMRAPECLPLIMEPESEFYTDPLIVLDFQSLYPSMIIAYNYCFS 1537
Query: 599 TCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
TCLGR+EH+G F FG L + ++ KLQ + SP GVAFV K +R GILP+ML
Sbjct: 1538 TCLGRIEHIGQYGPFEFGAATLRIRKNTVLKLQDKINFSPCGVAFVKKEVRQGILPRMLS 1597
Query: 659 EILDTRLMVKQSMK 672
EIL+TRLMVK+SMK
Sbjct: 1598 EILNTRLMVKESMK 1611
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 40/50 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
YTDP+IVLDFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG R
Sbjct: 1511 FYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFEFGAATLR 1560
>gi|328780807|ref|XP_003249865.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Apis
mellifera]
Length = 1633
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/525 (43%), Positives = 314/525 (59%), Gaps = 60/525 (11%)
Query: 168 KDSIHEAEITHPDCSKS------SQIDFNPDLFKSFIRKQLETPKRRICDSYAID---AM 218
K + +E H CS + S FNP L ++ LE P + D+ +
Sbjct: 719 KKTFNENMKYHSQCSNNLENSSESNNTFNPSL-----QEMLENPLLYMNDTRYLGISYGQ 773
Query: 219 TPDTTGDYQMGLDNLNEVTSHVENY--YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYL 276
+Y + N T+ N YLT+LA+EIH I+R PDP +D ++AIFY +
Sbjct: 774 IEYNLKEYSNNAEKENHQTARSLNMHQYLTILAIEIHVITRGKFLPDPNHDSIEAIFYAI 833
Query: 277 YTCPPEEDR----KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDI 332
Y P + + G+IL+ + N K ++N+
Sbjct: 834 YNDVPLSSKIDQIEHGVILLNSS---------------IKNSK------VKNI------- 865
Query: 333 LIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGY 392
Y T + Y VS+E++L + I +R DPDILIG+EIE LSWGY+ R
Sbjct: 866 ---YSSNTCTTSY------VSSEEDLLNSLIILIRHCDPDILIGWEIEFLSWGYIFHRAS 916
Query: 393 VLGLN-LNQELSRITEV--EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFE 449
+GLN ++SRI+ + S D+ + Q+PGRI+ ++WR++RHE+ L +YTFE
Sbjct: 917 HIGLNNFMSQISRISNAFPISKGQSFDKDNFSDTQIPGRIIFDVWRVMRHEIALLNYTFE 976
Query: 450 NIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSE 509
N+MY+V+HERI ++++LT WW H +W + HY+IRV G +R++ LD IG+T E
Sbjct: 977 NVMYNVMHERISCPTFQMLTEWWNHENMTMQWRVITHYIIRVVGTLRILIHLDIIGQTCE 1036
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
ARLFGIQFYEV SRGSQFRVES+MLRL++ N++ VSPSI+QRA MRAPESLPLI+EP+
Sbjct: 1037 HARLFGIQFYEVFSRGSQFRVESMMLRLAKPLNYIPVSPSIQQRARMRAPESLPLIMEPQ 1096
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKK 629
S YTDP++VLDFQSLYPS+IIAYNYCFSTCLGR+EH+G + + FG L + + +K
Sbjct: 1097 SAFYTDPLVVLDFQSLYPSIIIAYNYCFSTCLGRIEHIGQYEPYEFGTTTLKIKKNTAQK 1156
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
L + +P GVAFV IR GILP+ML EIL+TRLM+K SMK Y
Sbjct: 1157 LVGKINFAPCGVAFVKPEIRMGILPRMLSEILNTRLMIKNSMKLY 1201
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 154
M P S+ YTDP++VLDFQSLYPS+IIAYNYCFSTCLGR+EH+G + + FG
Sbjct: 1093 MEPQSA----FYTDPLVVLDFQSLYPSIIIAYNYCFSTCLGRIEHIGQYEPYEFG 1143
>gi|307203010|gb|EFN82226.1| DNA polymerase zeta catalytic subunit [Harpegnathos saltator]
Length = 1867
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/506 (43%), Positives = 315/506 (62%), Gaps = 53/506 (10%)
Query: 180 DCSKSSQIDFNPDLFK----SFIRKQLETPKRRICDSYA-IDAMTPDTTGDYQMGLDNLN 234
D S+ S+ NP L K + K ET +R SY I+ + + G+ + +NL
Sbjct: 1098 DGSQDSENSLNPSLKKVLENPLLYKHNETEQRF---SYGQIEYSSKGSHGN--VSNENLQ 1152
Query: 235 EVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQ 294
V + + YLT+L++E+H I+R L PDP YD + A+FY ++ PP + + +
Sbjct: 1153 NVRAVAVHQYLTLLSLEVHVITREDLLPDPQYDSIVALFYAIHNDPPPD--------VSE 1204
Query: 295 ESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSN 354
+ E + P + S + + LI Y V+
Sbjct: 1205 QIEHGAIIVNPCPV----------SARLNKIHSASAMCLITY---------------VAT 1239
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-LNQELSRITEVE---- 409
E+++F+ ++ + Q +PD+LIG+E+E+LSWGY+ +R L LN +S++ V+
Sbjct: 1240 EQDVFNNLVKLIEQHNPDVLIGWEVESLSWGYVFQRASHLALNGFPLRISKVPYVQIPSN 1299
Query: 410 ---KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
R +D++ +++++PGR ++++WR++RHE L +YTFEN+M+HVLHERIP S++
Sbjct: 1300 KFDARMFEKDDM--SEIKVPGRNILDVWRIMRHEAALLTYTFENVMHHVLHERIPCPSFR 1357
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
L+ WW+H + K + HY+IRV G ++++ LD IGRT E ARLFGIQFYEV SRGS
Sbjct: 1358 TLSTWWKHESMTMKCRVIHHYIIRVRGTLKILSHLDVIGRTCEHARLFGIQFYEVFSRGS 1417
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
QFRVES+MLRL++ N++ +SPSI QRA MRAPE LPLI+EPES+ Y DP+IVLDFQSLY
Sbjct: 1418 QFRVESMMLRLAKPMNYIPISPSIHQRAKMRAPECLPLIMEPESKFYVDPLIVLDFQSLY 1477
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+IIAYNYCFSTCLGR+EH+G F FG L V+ KLQ + SP GVAFV K
Sbjct: 1478 PSMIIAYNYCFSTCLGRIEHIGQYGPFDFGAATLRVTKSRTLKLQDKMNFSPCGVAFVKK 1537
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMK 672
+R GI+P+ML EIL+TRLMVK+SMK
Sbjct: 1538 EVRQGIMPRMLMEILNTRLMVKESMK 1563
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 40/51 (78%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
+ Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG R
Sbjct: 1462 KFYVDPLIVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFDFGAATLR 1512
>gi|301615023|ref|XP_002936975.1| PREDICTED: DNA polymerase zeta catalytic subunit [Xenopus (Silurana)
tropicalis]
Length = 3130
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/509 (40%), Positives = 334/509 (65%), Gaps = 45/509 (8%)
Query: 190 NPD-----LFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYY 244
NPD L + ++ Q T + ++ I+ + + + +++ + NL + + E +
Sbjct: 2238 NPDKLRRVLLTTQMKNQFATMAQLKRETSQIEGPSLNNSYGFKVSVQNLQDAKALHEVQH 2297
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT++++E+HA +R L+PDP +D + A+FY L + +S L K
Sbjct: 2298 LTLMSMELHARTRRDLEPDPEFDPICALFYCLSS----------------DSLLSNANKK 2341
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDI----LIGYEIETFSWGYLLERHFVSNEKELFS 360
+ + + +E S E R+ P + + G+E+ + ++EK+LF
Sbjct: 2342 QVTGAIIVHLEEPSS---EGGRRQTPFLARSGITGFEVT-----------YAADEKQLFE 2387
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDE 417
+ + VR++DPDIL+GYE++ SWGYLL+R L ++L Q+LSR+ + + N + +DE
Sbjct: 2388 MLLSLVRRFDPDILLGYEVQMHSWGYLLQRASALNVDLCQQLSRVPDDKNENRFSTEKDE 2447
Query: 418 VKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+++ + GRIV+N+WR++R EV L +YTFEN+ +HVLH+R PL +++ L+ W+++
Sbjct: 2448 YGADTMSEINIVGRIVLNVWRMMRSEVALTNYTFENVAFHVLHQRFPLFTFRSLSDWFDN 2507
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
R + +W T ++Y+ RV G ++++E+LD IGRTSE+ARLFGIQF VL+RGSQ+RVES+M
Sbjct: 2508 RKDVLRWRTADYYMCRVHGSLQVLEKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMM 2567
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
LR+++ N++ ++PSI+QR+ MRAP+ +PL++EPESR Y++ I+VLDFQSLYPS++IAYN
Sbjct: 2568 LRIAKPMNYIPLTPSIQQRSQMRAPQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYN 2627
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLG +E+LG + F FGC L V L +L+ ++T+SP+GVAFV +R G+LP
Sbjct: 2628 YCYSTCLGNIENLGKYEDFKFGCSSLQVPPDLLYQLRHDITVSPNGVAFVKACVRKGVLP 2687
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML+EIL TR+MVKQSMK+YK + L L
Sbjct: 2688 RMLEEILKTRIMVKQSMKKYKHDKGLTRL 2716
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 4/59 (6%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPN 167
R Y++ I+VLDFQSLYPS++IAYNYC+STCLG +E+LG + F FGC S Q PP+
Sbjct: 2604 RFYSNCILVLDFQSLYPSIVIAYNYCYSTCLGNIENLGKYEDFKFGC----SSLQVPPD 2658
>gi|348531132|ref|XP_003453064.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oreochromis
niloticus]
Length = 3036
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 323/488 (66%), Gaps = 34/488 (6%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
L PK+ D+ I+ + + +++ + NL + + E +LT++ +E+HA +R L+
Sbjct: 2161 LNVPKK---DNSQIEGPSIANSYGFKVSMQNLQDAKALHEVQHLTLMTMELHARTRRDLE 2217
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTF 321
PDP +D + A+FY + P LP+V + V ++ S+
Sbjct: 2218 PDPEFDPICALFYCFSSDTP----------------LPDVDNTQLTGAIVVDKDHQGSS- 2260
Query: 322 IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIET 381
+ R P +L+ + L+ + ++EK LF + + +R++DPDIL+GYE++
Sbjct: 2261 -QGCRGRAP-LLVRSGVSG------LQVTYAADEKMLFDVLVTIMRRFDPDILVGYEVQL 2312
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQLQMPGRIVINLWR 435
SWGYLL+R LG++L Q+LSR+ K N + RDE T++ + GRI +NLWR
Sbjct: 2313 HSWGYLLQRSSALGVDLCQQLSRVPGDSKENRFAAERDEYGADTMTEINIIGRITLNLWR 2372
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
+++ EV L +YTFEN+ +HVLH+R PL+S + L+ W++H T LY+W V+HY+ RV G +
Sbjct: 2373 VMKTEVTLNNYTFENVAFHVLHQRFPLYSPRTLSDWFDHNTDLYRWKMVDHYVSRVRGCM 2432
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+L++Q D IGRTSE+ARLFGIQF+ VL+RGSQ+RVES+MLR+++ N+V V+PSI+QRA
Sbjct: 2433 QLLQQHDIIGRTSELARLFGIQFFHVLTRGSQYRVESMMLRVAKPLNYVPVTPSIQQRAQ 2492
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
RAP+ +PL++EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG V++LG D F F
Sbjct: 2493 QRAPQCIPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDNLGTPDEFKF 2552
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
GC L V L +L+ ++T+SP G+AFV S+R G+LP ML+EIL+TR+MVKQSMK YK
Sbjct: 2553 GCTSLRVPPELLYQLRNDITVSPGGIAFVKSSVRKGVLPMMLEEILNTRIMVKQSMKTYK 2612
Query: 676 FSESLRNL 683
++L L
Sbjct: 2613 QDKALTKL 2620
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG V++LG D F FGC + R
Sbjct: 2508 RFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDNLGTPDEFKFGCTSLR 2558
>gi|260823502|ref|XP_002604222.1| hypothetical protein BRAFLDRAFT_262795 [Branchiostoma floridae]
gi|229289547|gb|EEN60233.1| hypothetical protein BRAFLDRAFT_262795 [Branchiostoma floridae]
Length = 813
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/440 (47%), Positives = 295/440 (67%), Gaps = 49/440 (11%)
Query: 250 VEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMN 309
+E+H +R L+PDP YD + +FY L+ + R G+ + G
Sbjct: 1 MELHIRTRRELRPDPEYDPICMLFYCLHD-DGQRARGQGVEVTG---------------- 43
Query: 310 FVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQW 369
N R P S L+ +V+ EKEL F++ +R+W
Sbjct: 44 --------------NCRPLLPR----------SGVTSLDVTYVAEEKELVEHFLQLIRKW 79
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQ-- 424
DPDIL+GYE++ LSWGYLL+R L ++L LSRI + K + + +DE Q+
Sbjct: 80 DPDILVGYEVQMLSWGYLLQRAATLEMDLCPMLSRIPDAAKESRFSADQDEWGADQMSEI 139
Query: 425 -MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
+ GRIVIN+WRL+R+E+ L +YTFEN+ +H +H+R+PL+S++ L+ W++++T L W T
Sbjct: 140 SIVGRIVINVWRLMRNELALNNYTFENVAFHAMHQRVPLYSFRTLSDWFDNKTDL--WRT 197
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
V+H++ R G ++L+EQ+D IGRTSE+ARLFGIQFY VL+RGSQ+RVES+MLR+++ N+
Sbjct: 198 VDHFVTRCRGNLQLLEQMDLIGRTSELARLFGIQFYHVLTRGSQYRVESMMLRIAKPMNY 257
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+AVSPS++QRA RAPE LPLILEPESR YT P++VLDFQSLYPS++IAYNYC++TCLGR
Sbjct: 258 IAVSPSMQQRARQRAPECLPLILEPESRFYTHPVLVLDFQSLYPSIVIAYNYCYTTCLGR 317
Query: 604 VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDT 663
VEHL F FGC L V +L+KLQ LT+SP+GVAF+ K +R G+LP MLQ+IL+T
Sbjct: 318 VEHLSEPGEFEFGCSSLKVPPGTLRKLQDRLTVSPNGVAFITKDVRKGVLPGMLQDILNT 377
Query: 664 RLMVKQSMKEYKFSESLRNL 683
R+MVK+SMK+YK ++L +
Sbjct: 378 RIMVKKSMKDYKQDKNLTRM 397
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R YT P++VLDFQSLYPS++IAYNYC++TCLGRVEHL F FGC
Sbjct: 285 RFYTHPVLVLDFQSLYPSIVIAYNYCYTTCLGRVEHLSEPGEFEFGC 331
>gi|332027078|gb|EGI67174.1| DNA polymerase zeta catalytic subunit [Acromyrmex echinatior]
Length = 1974
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/566 (40%), Positives = 334/566 (59%), Gaps = 43/566 (7%)
Query: 117 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNK--DSIHEA 174
L+ Q + +I A N + G +L +DS I S QS NK D +
Sbjct: 1002 ALNVQDVQHPLINATNKEIKSQPGTSNNLISNDSNVERHIDSLMPQQSMLNKTSDETKKL 1061
Query: 175 EITHPDCSKSSQIDFNPDLFKSFIRKQL-ETPKRRICDSYAIDAMTPDTTGDYQMGLDNL 233
E + + S S+ +P L ++ L + K ++ SY + + + +NL
Sbjct: 1062 ETQNSNDSLISEKSLDPSLKRALANPLLHKQDKTQLGVSYGQIECSSKGSYGSNVSNENL 1121
Query: 234 NEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIG 293
+ + + YLT+L++E+HA++R L PDP YD + A+FY LY P
Sbjct: 1122 QKARAVTVHQYLTLLSLEVHAVTREDLLPDPQYDSIAALFYALYNDAP------------ 1169
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
+ +NE+ + I N + + S +V+
Sbjct: 1170 --------------TDATTNEQIEHAAIIVNSNSISARL-----NKIHSASARCPILYVA 1210
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-LNQELSRITEVEKRN 412
E++ F+ ++ + + +PDIL+G+E+E LSWGY+ +R + LGLN +SR+ ++ +
Sbjct: 1211 TEQDAFNSLVKLIERHNPDILLGWEVEALSWGYVFQRAFYLGLNNFPLRISRVPHMQIYS 1270
Query: 413 SS------RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
S +D++ + +++ GR ++++WR++RHE L +YTFEN+M+HVL+ER+P S+K
Sbjct: 1271 KSDAHAIEKDDIGD--VKVSGRNLLDVWRIMRHEAALLTYTFENVMHHVLYERVPCPSFK 1328
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
L+ WW+ + + K + HY++RV G ++L+ LD IGRT E+ARLFGIQFYEV SRGS
Sbjct: 1329 TLSTWWKQESMIIKSRVIHHYIVRVVGTLKLLSHLDVIGRTCELARLFGIQFYEVFSRGS 1388
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
QFRVESIMLRL++ N++ +SPSI QRA MRAPE LPLI+EPES+ YTDP+IVLDFQSLY
Sbjct: 1389 QFRVESIMLRLAKPMNYIPISPSIHQRAKMRAPECLPLIMEPESKFYTDPLIVLDFQSLY 1448
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+IIAYNYCFSTCLGR+EH+G F FG L V + KLQ + SP GVAFV K
Sbjct: 1449 PSMIIAYNYCFSTCLGRIEHIGQYGPFEFGAATLRVRKNTALKLQDKINFSPCGVAFVKK 1508
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMK 672
+R GILP+ML EIL+TRLMVK+SMK
Sbjct: 1509 EVRQGILPRMLSEILNTRLMVKESMK 1534
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 41/51 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
+ YTDP+IVLDFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG R
Sbjct: 1433 KFYTDPLIVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFEFGAATLR 1483
>gi|281427127|ref|NP_001163919.1| REV3-like, polymerase (DNA directed), zeta, catalytic subunit
[Xenopus laevis]
gi|262176857|gb|ACY27483.1| DNA polymerase zeta [Xenopus laevis]
Length = 3139
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/509 (40%), Positives = 330/509 (64%), Gaps = 45/509 (8%)
Query: 190 NPD-----LFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYY 244
NPD L + ++ Q T + ++ I+ + + + +++ + NL + + E +
Sbjct: 2247 NPDKLRRVLLTTQMKNQFATMAQVKRETSQIEGPSLNNSYGFKVSVQNLQDAKALHEVQH 2306
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT++ +E+HA +R L+PDP +D + A+FY I +S L +
Sbjct: 2307 LTLMCMELHARTRRDLEPDPEFDPICALFY----------------CISSDSLLSNTNKR 2350
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDI----LIGYEIETFSWGYLLERHFVSNEKELFS 360
+ V + +E S + R+ P + + G+E+ + ++EK+LF
Sbjct: 2351 QVTGAIVIHLEEANS---DGGRRQTPFLARSGITGFEVT-----------YATDEKQLFV 2396
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDE 417
+ + VR++DPDIL+GYE++ SWGYLL+R L ++L Q+LSR+ + + N S +DE
Sbjct: 2397 MLLSLVRRFDPDILLGYEVQMHSWGYLLQRASALNVDLCQQLSRVPDDKNENRFSSEKDE 2456
Query: 418 VKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+++ + GRIV+N+WR++R E L +YTFEN+ +H+LH+R PL +++ L+ W+++
Sbjct: 2457 YGADTMSEINIVGRIVLNVWRMMRSEAALTNYTFENVAFHILHQRFPLFTFRSLSDWFDN 2516
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
R + +W ++Y+ RV G ++L+E+LD IGRTSE+ARLFGIQF VL+RGSQ+RVES+M
Sbjct: 2517 RKDVLRWKMADYYMSRVHGTLQLLEKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMM 2576
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
LR+++ N++ ++PSI+QR+ MRAP+ +PL++EPESR Y++ I+VLDFQSLYPS++IAYN
Sbjct: 2577 LRIAKPMNYIPLTPSIQQRSQMRAPQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYN 2636
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLG VE+LG + F FGC L V L +L+ ++T+SP+GVAFV +R G+LP
Sbjct: 2637 YCYSTCLGNVENLGKYEDFKFGCSSLQVPPDLLYQLRNDITVSPNGVAFVKACVRKGVLP 2696
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML+EIL TR+MVKQSMK YK +SL L
Sbjct: 2697 RMLEEILKTRIMVKQSMKNYKQDKSLTRL 2725
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 4/59 (6%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPN 167
R Y++ I+VLDFQSLYPS++IAYNYC+STCLG VE+LG + F FGC S Q PP+
Sbjct: 2613 RFYSNCILVLDFQSLYPSIVIAYNYCYSTCLGNVENLGKYEDFKFGC----SSLQVPPD 2667
>gi|383864467|ref|XP_003707700.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Megachile
rotundata]
Length = 1647
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/530 (42%), Positives = 324/530 (61%), Gaps = 53/530 (10%)
Query: 158 SRESNQSPPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETP---KRRICDSY- 213
+ ++ ++ NK S+ + + + + + S + S +RK LE P K Y
Sbjct: 721 TNDTTENVVNKSSVDDEKKSSQNSNNSQHLSGLNINVNSSLRKMLENPLLYKNNDSQQYL 780
Query: 214 -----AIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDE 268
ID +G+ + +NL + LT+L+VE+H ++ L P+P ++
Sbjct: 781 GISFGQIDYSMKGHSGNVED--ENLQHARGLTMHQCLTILSVEVHVNTQGKLLPNPEHNA 838
Query: 269 VKAIFYYLYTCPPEE--DR-KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENV 325
++AIFY +Y P DR G IL+ + NEK ++N+
Sbjct: 839 IEAIFYAVYADVPSSQVDRIDHGAILVNSS---------------IQNEK------VKNI 877
Query: 326 RQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWG 385
I Y VSNE+ L + I+ +R DPDILIG+EIE+ SWG
Sbjct: 878 HTTSNMCAISY---------------VSNEENLLNSLIKLIRYCDPDILIGWEIESASWG 922
Query: 386 YLLERGYVLGLN-LNQELSRITEVEKRNSSRDEVKNT--QLQMPGRIVINLWRLLRHEVN 442
Y+ +R +G N ++SRI+ V + + K+T +++PGRIV+++WR++RHE+
Sbjct: 923 YIFQRAAHIGFNSFMWQISRISNVTSASKGQMLDKDTLSDIKVPGRIVLDVWRIMRHEIA 982
Query: 443 LQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLD 502
L +YTFEN+MY+V+ ER+P S++ L+ WW+H + +W + HY+IRV G IR++ LD
Sbjct: 983 LLNYTFENVMYNVMRERVPCPSFQTLSHWWKHNSITIQWRVITHYVIRVVGTIRILIHLD 1042
Query: 503 FIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL 562
IG+T E ARL GIQFYE+ SRGSQFRVES+MLRL++ N++AVSPSI+Q+A+MRAP++L
Sbjct: 1043 IIGKTCEHARLIGIQFYEIFSRGSQFRVESMMLRLAKPLNYIAVSPSIQQKANMRAPQAL 1102
Query: 563 PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNV 622
PLI+EP+S YTDP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEH+G+++ F FG L +
Sbjct: 1103 PLIMEPQSIFYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGLNEPFEFGATTLRI 1162
Query: 623 SIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++ KLQ + SP GVAFV +R GILP+ML EIL+TRLMVK SMK
Sbjct: 1163 KKSTVTKLQGKINFSPCGVAFVKPEVRLGILPRMLTEILNTRLMVKASMK 1212
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 43/50 (86%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
YTDP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEH+G+++ F FG R
Sbjct: 1112 FYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGLNEPFEFGATTLR 1161
>gi|350412206|ref|XP_003489571.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
impatiens]
Length = 2056
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/432 (47%), Positives = 283/432 (65%), Gaps = 36/432 (8%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
YLT+LAVEIH I+R PDP +D + AIFY ++ P S++ ++
Sbjct: 1233 YLTILAVEIHVITRDKFLPDPNHDPIGAIFYAIHNDVP------------LSSKIEQIEH 1280
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
I L S+ +N + ++ +VS E++L + I
Sbjct: 1281 GAI----------LVSSLTQNTK-----------VKNIHSANTCTTSYVSTEEDLLNSLI 1319
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-NLNQELSRITEVE--KRNSSRDEVKN 420
VR DPDILIG+E+E+LSWGY+ R +GL + ++SRI + + D+
Sbjct: 1320 ILVRHCDPDILIGWEVESLSWGYIFHRASHIGLKDFMWQISRIPTAPPISKGQASDKDNF 1379
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ ++ GRI++++WR++RHE+ L +YTFEN+MYHV+ ER+ ++++LT WW H++ +
Sbjct: 1380 SDAKISGRIILDVWRIIRHEIALLNYTFENVMYHVMRERVSCPTFQILTNWWNHKSVTIR 1439
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
W + HY+IR+ G +R++ LD IGRT E ARLFGIQFYEV SRGSQFRVES+MLRL++
Sbjct: 1440 WRVITHYVIRIVGTLRILIHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKP 1499
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
N+++VSPSI+QRA MRAPESLPLI+EP+S LYTDP+IVLDFQSLYPS+IIAYNYCFSTC
Sbjct: 1500 LNYISVSPSIQQRARMRAPESLPLIMEPQSTLYTDPLIVLDFQSLYPSIIIAYNYCFSTC 1559
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGRVEH+G + + FG L + + KKL + +P GVAFV IR GILP+ML EI
Sbjct: 1560 LGRVEHIGHYEPYEFGATTLKIKKDTAKKLFGKINFAPCGVAFVKPEIRMGILPRMLTEI 1619
Query: 661 LDTRLMVKQSMK 672
L+TRLMVK+SMK
Sbjct: 1620 LNTRLMVKKSMK 1631
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
M P S+ LYTDP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEH+G + + FG
Sbjct: 1525 MEPQST----LYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGHYEPYEFGA 1576
>gi|340727622|ref|XP_003402139.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Bombus
terrestris]
Length = 1635
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/432 (47%), Positives = 283/432 (65%), Gaps = 36/432 (8%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
YLT+LAVEIH I+R PDP +D + AIFY ++ P S++ ++
Sbjct: 812 YLTILAVEIHVITRDKFLPDPNHDPIGAIFYAIHNDVP------------LSSKIEQIEH 859
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
I L S+ +N + ++ +VS E++L + I
Sbjct: 860 GAI----------LVSSLTQNTK-----------VKNIHSANTCTTSYVSTEEDLLNSLI 898
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-NLNQELSRITEVE--KRNSSRDEVKN 420
VR DPDILIG+EIE+LSWGY+ R +GL + ++SRI + + D+
Sbjct: 899 ILVRHCDPDILIGWEIESLSWGYIFHRASHIGLKDFMWQISRIPTAPPISKGQASDKDNF 958
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ ++ GRI++++WR++RHE+ L +YTFEN+MYHV+ ER+ ++++LT WW H++ +
Sbjct: 959 SDAKISGRIILDVWRIMRHEIALLNYTFENVMYHVMRERVSCPTFQVLTNWWNHKSVTIR 1018
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
W + HY+IR+ G +R++ LD IGRT E ARLFGIQFYEV SRGSQFRVES+MLRL++
Sbjct: 1019 WRVITHYVIRIVGTLRILIHLDIIGRTCEHARLFGIQFYEVFSRGSQFRVESMMLRLAKP 1078
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
N+++VSPSI+QRA MRAPESLPLI+EP+S LYTDP+IVLDFQSLYPS+IIAYNYCFSTC
Sbjct: 1079 LNYISVSPSIQQRARMRAPESLPLIMEPQSTLYTDPLIVLDFQSLYPSIIIAYNYCFSTC 1138
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGRVEH+G + + FG L + + KKL + +P GVAFV IR GILP+ML EI
Sbjct: 1139 LGRVEHIGHYEPYEFGATTLKIKKDTAKKLFGKINFAPCGVAFVKPEIRMGILPRMLTEI 1198
Query: 661 LDTRLMVKQSMK 672
L+TRLMVK+SMK
Sbjct: 1199 LNTRLMVKKSMK 1210
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
M P S+ LYTDP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEH+G + + FG
Sbjct: 1104 MEPQST----LYTDPLIVLDFQSLYPSIIIAYNYCFSTCLGRVEHIGHYEPYEFGA 1155
>gi|322795808|gb|EFZ18487.1| hypothetical protein SINV_12915 [Solenopsis invicta]
Length = 1861
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 289/452 (63%), Gaps = 48/452 (10%)
Query: 231 DNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPP---EEDRKV 287
+NL + + + YLT+L++E+HA++R L PDP YD V A+FY +Y P E+ +
Sbjct: 1026 ENLQKARAITVHQYLTLLSLEVHAVTREELLPDPQYDSVAALFYAIYNDAPKDTEQQIEH 1085
Query: 288 GIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLL 347
G I++ S ++N + + +
Sbjct: 1086 GAIIVNSNS-------VSARLNKIHSASAMCPIL-------------------------- 1112
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-LNQELSRIT 406
+V+ E++ F I+ + Q +PD+L+G+E+ETLSWGY+ +R L LN +S++
Sbjct: 1113 ---YVATEQDAFDNLIKLIEQHNPDVLLGWEVETLSWGYIFQRALYLRLNNFPVRISKVP 1169
Query: 407 EVEKRNSS------RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
++ + S +D+ ++++ GR ++++WR++RHE L +YTFEN+MYHVLHERI
Sbjct: 1170 HIQIFSKSDVYAFEKDDA--NEIKVLGRNILDVWRIMRHEAALLTYTFENVMYHVLHERI 1227
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
P S+K L+ WW+ + + K + HY+IRV G I+L+ LD IGRT E ARLFGIQFYE
Sbjct: 1228 PCPSFKALSTWWKQESMILKSRVIRHYVIRVVGTIKLLNHLDIIGRTCEHARLFGIQFYE 1287
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
V SRGSQFRVES+MLRL++ N++ +SPS+ QRA MRAPE LPLI+EPES+ YTDP++VL
Sbjct: 1288 VFSRGSQFRVESMMLRLAKPMNYIPISPSMHQRAKMRAPECLPLIMEPESKFYTDPLVVL 1347
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG L + + KLQ + SP G
Sbjct: 1348 DFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFDFGAATLRIRKNTALKLQGKINFSPCG 1407
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
VAFV K +R GILP+ML EIL+TRLMVK+SMK
Sbjct: 1408 VAFVKKEVRQGILPRMLTEILNTRLMVKESMK 1439
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
+ YTDP++VLDFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG R
Sbjct: 1338 KFYTDPLVVLDFQSLYPSMIIAYNYCFSTCLGRIEHIGQYGPFDFGAATLR 1388
>gi|198456440|ref|XP_001360325.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
gi|198135615|gb|EAL24900.2| GA15135 [Drosophila pseudoobscura pseudoobscura]
Length = 2075
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 310/479 (64%), Gaps = 38/479 (7%)
Query: 212 SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKA 271
S+ + T D T +++ L+NL + + +E YLT++ +E+ +R L+PDP +DE++
Sbjct: 1208 SFGLSHATLDNTFGFKVNLENLQQAKADIECNYLTIMTLEVFVATRGELQPDPMHDEMRC 1267
Query: 272 IFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPD 331
+FY + P+ D + LP +K V++ ++L S + + D D
Sbjct: 1268 LFYAIEHSLPDAD---------ADGSLP---SKACGYIMVNHAQDLLSEGL--IHGLDKD 1313
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
I E VSNE E + +WD DI GYEIE SWGY+++R
Sbjct: 1314 I---------------EVQVVSNEAEAMEALLALCARWDADIYAGYEIEMASWGYVIDRA 1358
Query: 392 YVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQSY 446
L N+ LSR+ + R+ R++ + ++M GRI++++WRL+R E+ L SY
Sbjct: 1359 KHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRSEIALTSY 1418
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
TFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL RV G + L++QLD +GR
Sbjct: 1419 TFENVMYHILHKRCPWHNPKTLTEWFA--SPCSRWIVLEYYLERVRGTLALLDQLDLLGR 1476
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS++QRAHMRAPE L LIL
Sbjct: 1477 TSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNVVPLSPSVQQRAHMRAPEYLALIL 1536
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG L VS +
Sbjct: 1537 EPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQM 1596
Query: 627 LKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L+KL ++ +T+SP GV FV + +R GILP+ML EILDTRLMVKQSMK +K + +L+ +
Sbjct: 1597 LQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRLMVKQSMKLHKENSALQRI 1655
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1539 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1595
>gi|195149658|ref|XP_002015773.1| GL10839 [Drosophila persimilis]
gi|194109620|gb|EDW31663.1| GL10839 [Drosophila persimilis]
Length = 2075
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 310/479 (64%), Gaps = 38/479 (7%)
Query: 212 SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKA 271
S+ + T D T +++ L+NL + + +E YLT++ +E+ +R L+PDP +DE++
Sbjct: 1208 SFGLSHATLDNTFGFKVNLENLQQAKADIECNYLTIMTLEVFVATRGELQPDPMHDEMRC 1267
Query: 272 IFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPD 331
+FY + P+ D + LP +K V++ ++L S + + D D
Sbjct: 1268 LFYAIEHSLPDAD---------ADGSLP---SKACGYIMVNHAQDLLSEGL--IHGLDKD 1313
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
I E VSNE E + +WD DI GYEIE SWGY+++R
Sbjct: 1314 I---------------EVQVVSNEVEAMEALLALCARWDADIYAGYEIEMASWGYVIDRA 1358
Query: 392 YVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQSY 446
L N+ LSR+ + R+ R++ + ++M GRI++++WRL+R E+ L SY
Sbjct: 1359 KHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRSEIALTSY 1418
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
TFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL RV G + L++QLD +GR
Sbjct: 1419 TFENVMYHILHKRCPWHNPKTLTEWFA--SPCSRWIVLEYYLERVRGTLALLDQLDLLGR 1476
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS++QRAHMRAPE L LIL
Sbjct: 1477 TSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNVVPLSPSVQQRAHMRAPEYLALIL 1536
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG L VS +
Sbjct: 1537 EPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQM 1596
Query: 627 LKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L+KL ++ +T+SP GV FV + +R GILP+ML EILDTRLMVKQSMK +K + +L+ +
Sbjct: 1597 LQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRLMVKQSMKLHKENSALQRI 1655
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1539 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1595
>gi|195430028|ref|XP_002063059.1| GK21718 [Drosophila willistoni]
gi|194159144|gb|EDW74045.1| GK21718 [Drosophila willistoni]
Length = 2028
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/502 (45%), Positives = 317/502 (63%), Gaps = 44/502 (8%)
Query: 192 DLFKSFIRKQLETPKRRICD-SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAV 250
+L +S +QLE + D S+ + T D T +++ L+NL + + +E +YLT+L +
Sbjct: 1137 ELDRSSFLQQLEDAQNGQNDLSFGLSHATLDNTFGFKVNLENLQQAKADIECHYLTILTL 1196
Query: 251 EIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNF 310
E+ +SR L+PDP +DE++ +FY + E LP+ +
Sbjct: 1197 EVFVVSRGDLQPDPLHDEIRCLFYAI------------------EHSLPQTEAQ------ 1232
Query: 311 VSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYL--LERHFVSNEKELFSIFIENVRQ 368
L S + P ++ E F+ G +E V++E E F + +
Sbjct: 1233 -----SLPSKCCGYIMVDSPQDIVP---EGFNHGLDRDIEVQVVASEVEAFEALLALCAR 1284
Query: 369 WDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQM 425
WDPDI GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M
Sbjct: 1285 WDPDIYAGYEIEMSSWGYIIDRAKHLCFNIAPMLSRVPSQKVRDFVDEDREQFTDLDVEM 1344
Query: 426 P--GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
GRI++++WRL+R E+ L SY+FEN+MYH+LH+R P HS + L+ W+ + +W+
Sbjct: 1345 KLCGRILLDVWRLMRSEIALTSYSFENVMYHILHKRCPWHSSRSLSEWFT--SPCTRWIV 1402
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+E+YL RV G + L++QLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N
Sbjct: 1403 MEYYLERVRGTLTLLDQLDLVGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNL 1462
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
V +SPS++QRAHMRAPE L LI+EP+SR Y DP+IVLDFQSLYPS+II YNYCFSTCLGR
Sbjct: 1463 VPLSPSVQQRAHMRAPEYLALIMEPQSRFYADPVIVLDFQSLYPSMIIGYNYCFSTCLGR 1522
Query: 604 VEHLGVSDSFPFGCIDLNVSIRSLKK-LQQNL-TISPSGVAFVDKSIRCGILPKMLQEIL 661
VEHLG S F FG L VS + L++ L NL TISP GV FV + +R GILP+ML EIL
Sbjct: 1523 VEHLGHSTPFEFGASQLRVSRQLLQQLLDHNLVTISPCGVVFVKREVREGILPRMLSEIL 1582
Query: 662 DTRLMVKQSMKEYKFSESLRNL 683
DTR MVKQSMK YK S +L+ +
Sbjct: 1583 DTRQMVKQSMKFYKDSSALQRI 1604
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 43/57 (75%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+II YNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1488 QSRFYADPVIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGHSTPFEFGASQLRVSRQ 1544
>gi|395816788|ref|XP_003781872.1| PREDICTED: DNA polymerase zeta catalytic subunit [Otolemur garnettii]
Length = 3076
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 261/335 (77%), Gaps = 6/335 (1%)
Query: 347 LERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT 406
LE + ++EK LF ++++DPDIL+GYEI+ SWGYLL+R L +NL Q +SR+
Sbjct: 2327 LEVTYAADEKALFQEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVNLCQMISRVP 2386
Query: 407 E--VEKR-NSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+ +E R + RDE + +++ + GRI +NLWR++R+EV L +YTFEN+ +HVLH+R
Sbjct: 2387 DDKIENRFAAERDEYGSDTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQRF 2446
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
PL ++++L+ W++++T LY+W V+HY+ RV G ++++EQLD IG+TSEMARLFGIQF
Sbjct: 2447 PLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARLFGIQFLH 2506
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
VL+RGSQ+RVES+MLR+++ N++ V+PSI+QR+ MRAP+ +PLI+EPESR Y++ ++VL
Sbjct: 2507 VLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSRMRAPQCIPLIMEPESRFYSNSVLVL 2566
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC L V L +++ ++T+SP+G
Sbjct: 2567 DFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQIRHDITVSPNG 2626
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
VAFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 2627 VAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK 2661
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2557 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2607
>gi|432945567|ref|XP_004083662.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oryzias
latipes]
Length = 2967
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 309/468 (66%), Gaps = 39/468 (8%)
Query: 226 YQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR 285
+++ + NL + + E +LT++A+E+HA +R L+PDP +D + A+FY + P D
Sbjct: 2113 FKVSMQNLQDAKALHEVQHLTLMAMELHARTRRDLEPDPEFDPICALFYCFSSDAPLPDA 2172
Query: 286 K----VGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETF 341
G I++ ++ E P R + R+ P +L+ +
Sbjct: 2173 DSTQLTGAIMVDKDHE-PGGRGR---------------------RETAP-LLVRSGVSG- 2208
Query: 342 SWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQE 401
L+ + S EK LF + +R+ DPDIL+GYE++ SWGYLL+R VLG++L Q+
Sbjct: 2209 -----LQVTYASEEKMLFQELVGIMRRLDPDILLGYEVQMHSWGYLLQRAAVLGVDLCQQ 2263
Query: 402 LSRITEVEKRN---SSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
LSR+ K N + +DE T++ + GR+ +NLWR+++ EV L SY+FEN+ +HV
Sbjct: 2264 LSRVPGDSKENRFAAEKDEYGADTMTEIHIIGRVTLNLWRVMKSEVALNSYSFENVAFHV 2323
Query: 456 LHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
LH+R PL S + L+ W++H T+LY+W V+HY+ RV + L++Q D +GRTSE+ARLFG
Sbjct: 2324 LHQRFPLFSHRTLSDWFDHNTNLYRWKMVDHYVSRVCSSMHLLQQNDIVGRTSELARLFG 2383
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
IQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QRA RAP+ +PL++EPESR Y++
Sbjct: 2384 IQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQRAQQRAPQCIPLVMEPESRFYSN 2443
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
++VLDFQSLYPS++IAYNYCFSTCLG E LG D F FGC L V L +L+ ++
Sbjct: 2444 SVLVLDFQSLYPSIVIAYNYCFSTCLGHQESLGTPDEFKFGCTSLRVPPEMLYQLRNDIN 2503
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+SPSG+AFV ++R G+LP+ML+EIL+TR+MVKQSMK YK ++L L
Sbjct: 2504 VSPSGIAFVKSTVRKGVLPRMLEEILNTRIMVKQSMKTYKQDKALMKL 2551
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG E LG D F FGC + R
Sbjct: 2439 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHQESLGTPDEFKFGCTSLR 2489
>gi|195380071|ref|XP_002048794.1| GJ21240 [Drosophila virilis]
gi|194143591|gb|EDW59987.1| GJ21240 [Drosophila virilis]
Length = 2044
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 305/479 (63%), Gaps = 36/479 (7%)
Query: 212 SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKA 271
S+ + T D T +++ L+NL + + +E YLT + +E+ +R L+PDP YDE++
Sbjct: 1174 SFGLTNATLDNTFGFKVNLENLQQAKADIECNYLTTMTLELFVPTRDELQPDPLYDEIRC 1233
Query: 272 IFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPD 331
IFY + + + ++ LP +K VS+ ++L S + D D
Sbjct: 1234 IFYAI-------EHSLPAAAGAEQQALP---SKACGYIIVSDAQDLVSEGRHH--GLDAD 1281
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
I E V +E + F + +WD DI GYEIE SWGY++ER
Sbjct: 1282 I---------------ELQVVQSEAQAFEALLALCTRWDADIYAGYEIEMSSWGYIIERA 1326
Query: 392 YVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQSY 446
L N+ LSR+ + R+ R+ + ++M GRI++++WRL+R E+ L SY
Sbjct: 1327 KHLCFNIAPLLSRVPTQKVRDFVDEDRESFTDLDVEMKLCGRILLDVWRLMRSEIALTSY 1386
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
TFEN+MYH+LH+R P HS + LT W+ + +W+ +E+YL RV G + L++QLD +GR
Sbjct: 1387 TFENVMYHILHKRCPWHSPRALTDWFA--SPCTRWIVLEYYLERVRGTLALLDQLDLLGR 1444
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS++QRAHMRAPE L LI+
Sbjct: 1445 TSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLALIM 1504
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EPESR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG L VS
Sbjct: 1505 EPESRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGSSSPFEFGASQLRVSRPL 1564
Query: 627 LKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L++L + +TISP GV FV + +R GILP+ML EILDTRLMVKQSMK ++ S +L+ +
Sbjct: 1565 LQQLLERDLVTISPCGVVFVKRQVREGILPRMLSEILDTRLMVKQSMKLHRDSSALQRV 1623
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 40/47 (85%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG
Sbjct: 1509 RFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGSSSPFEFGA 1555
>gi|156386840|ref|XP_001634119.1| predicted protein [Nematostella vectensis]
gi|156221198|gb|EDO42056.1| predicted protein [Nematostella vectensis]
Length = 497
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 258/335 (77%), Gaps = 6/335 (1%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+V EK+LF + R+WDPD+LIGYE++ LSWGYL++R V L+L +L+R++
Sbjct: 2 YVKKEKDLFPALLGLFREWDPDVLIGYEVQMLSWGYLIQRALVFDLDLASKLARVSGSSS 61
Query: 411 R---NSSRDE---VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+S +D+ +++++ GRIV+N+WRL+RHEV L Y+FEN+ +HVLHERIPL
Sbjct: 62 SSNMDSEKDQWGAAHASEIKIAGRIVLNVWRLMRHEVTLNVYSFENVAFHVLHERIPLFP 121
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ L+ WW+H+T +++W TV+HY+ R G +RL+EQLDFIGRTSE+ARLFGI FY V+SR
Sbjct: 122 YRSLSDWWDHKTDMHRWRTVQHYVTRCCGNVRLLEQLDFIGRTSELARLFGILFYSVISR 181
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQFRVES+MLR+++ N++A SPS++QR MRAPE +PL+LEPESR Y P++VLDFQS
Sbjct: 182 GSQFRVESMMLRIAKPMNYIAASPSVQQRNSMRAPEVIPLVLEPESRFYHHPVLVLDFQS 241
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++IAYNYC+STCLGRV + F FG + L+ LK+L++++ ISP+GVAFV
Sbjct: 242 LYPSMMIAYNYCYSTCLGRVSSIAEGSHFKFGALSLSEPPSLLKQLERDIHISPNGVAFV 301
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSES 679
++R G+LP+ML++IL+TR+MVK SMK++K ++S
Sbjct: 302 KSNVRRGVLPRMLEDILNTRIMVKNSMKKWKDNKS 336
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPN 167
R Y P++VLDFQSLYPS++IAYNYC+STCLGRV + F FG ++ E PP+
Sbjct: 228 RFYHHPVLVLDFQSLYPSMMIAYNYCYSTCLGRVSSIAEGSHFKFGALSLSE----PPS 282
>gi|194755285|ref|XP_001959922.1| GF13111 [Drosophila ananassae]
gi|190621220|gb|EDV36744.1| GF13111 [Drosophila ananassae]
Length = 2124
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/481 (45%), Positives = 304/481 (63%), Gaps = 47/481 (9%)
Query: 212 SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKA 271
S+ + T D T +++ L+NL E + VE +LT++ +E+ +R L+PDP +DE++
Sbjct: 1262 SFGLSHATLDNTFGFKVNLENLQEAKADVECNHLTIMTLEVFVCTRGDLQPDPMFDEIRC 1321
Query: 272 IFYYLYTCPPEE--DRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWD 329
+FY + ++ ++ G I++ + I+ FV D
Sbjct: 1322 LFYAIEHSLDDDLPNKTCGYIMVNDAQDF-------IKEGFVHG--------------LD 1360
Query: 330 PDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLE 389
DI E V+NE E F + +WD DI GYEIE SWGY+++
Sbjct: 1361 KDI---------------EVQVVANEAEAFEALLALCGRWDADIYAGYEIEMSSWGYVID 1405
Query: 390 RGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQ 444
R + N+ LSR+ + R+ R++ + ++M GRI++++WRL+R E+ L
Sbjct: 1406 RAKQMCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRSEIALT 1465
Query: 445 SYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFI 504
SYTFEN+MYH+LH R P HS K L+ W+ + +W+ +E+YL RV G + L++QLD +
Sbjct: 1466 SYTFENVMYHILHRRCPWHSSKTLSEWFS--SPCTRWIVMEYYLERVRGTLALLDQLDLL 1523
Query: 505 GRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL 564
GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS++QRAHMRAPE L L
Sbjct: 1524 GRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLAL 1583
Query: 565 ILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSI 624
I+EP+SR Y DP+IVLDFQSLYPS+II YNYCFSTCLGRVEHLG S F FG L VS
Sbjct: 1584 IMEPQSRFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSR 1643
Query: 625 RSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRN 682
+ L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR MVKQSMK +K S +L+
Sbjct: 1644 QMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHKDSSALQR 1703
Query: 683 L 683
+
Sbjct: 1704 I 1704
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 43/57 (75%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+II YNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1588 QSRFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1644
>gi|195474494|ref|XP_002089526.1| GE19149 [Drosophila yakuba]
gi|194175627|gb|EDW89238.1| GE19149 [Drosophila yakuba]
Length = 2007
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/497 (45%), Positives = 318/497 (63%), Gaps = 45/497 (9%)
Query: 196 SFIRKQLE--TPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIH 253
SF+R QLE + +R+ S+ + T D T +++ L+NL + + +E +LT++ +E+
Sbjct: 1127 SFLR-QLECSSQERQHDVSFGLSHATMDNTFGFKVNLENLQQAKADIECNHLTIIILEVF 1185
Query: 254 AISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSN 313
+R L+PDP +DE++ +FY + P+E+ LP +K V+
Sbjct: 1186 VSTRGDLQPDPMHDEIRCLFYAIEHSLPDEN-------------LP---SKACGYIMVNT 1229
Query: 314 EKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDI 373
++L S E + + +E V+NE E F + +WD DI
Sbjct: 1230 AQDLLS-----------------EGHSHAIDRDIEVQVVTNEAEAFEALLALCGRWDADI 1272
Query: 374 LIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GR 428
GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M GR
Sbjct: 1273 FAGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGR 1332
Query: 429 IVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYL 488
I++++WRL+R E+ L SYTFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL
Sbjct: 1333 ILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTPKSLTEWFA--SPCTRWLVMEYYL 1390
Query: 489 IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
RV G + L++QLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SP
Sbjct: 1391 ERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSP 1450
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 608
S++ RAHMRAPE L LI+EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG
Sbjct: 1451 SVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLG 1510
Query: 609 VSDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLM 666
S F FG L VS + L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR M
Sbjct: 1511 GSTPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQM 1570
Query: 667 VKQSMKEYKFSESLRNL 683
VKQSMK +K S +L+ +
Sbjct: 1571 VKQSMKLHKDSSALQRI 1587
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1471 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSTPFEFGASQLRVSRQ 1527
>gi|390338524|ref|XP_786092.3| PREDICTED: uncharacterized protein LOC580974 [Strongylocentrotus
purpuratus]
Length = 3741
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 314/489 (64%), Gaps = 24/489 (4%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
I+ TP T +++ N+ + + +LT +++E+HA +R PDP +D ++AIFY
Sbjct: 2767 IEGPTPKNTYGFKVSQGNVQDAKALHVVQHLTTMSLEVHARTRRDYHPDPEFDPIRAIFY 2826
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFI-----------E 323
++T P+ G G + + + VS+E + I +
Sbjct: 2827 CIHTDGPDNKAPPGNHHRG---NVDDPKASADASKDVSDEGHIRVGVIMVDLSKKGSKGD 2883
Query: 324 NVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLS 383
D +++ + S +E +V EKE+F F++ VR+ DPD+L G+EI+ LS
Sbjct: 2884 GGNVTDLNVVTQRDWMARSGVMGIEVTYVEEEKEMFEEFVKLVRRHDPDMLAGFEIQQLS 2943
Query: 384 WGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN-------TQLQMPGRIVINLWRL 436
WGYL +R L + L Q +SR+ + +KR S K+ +++ + GR+V+NLWR+
Sbjct: 2944 WGYLFQRAAFLEVQLCQLISRLPD-DKRESHFAAEKDAYGADHMSEITVAGRVVLNLWRI 3002
Query: 437 LRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIR 496
+RHEV L YTFEN+ YHVLH+R+PL +++ LT W++H T Y+W T+E+Y RV G I+
Sbjct: 3003 IRHEVTLNIYTFENVAYHVLHQRLPLFTFRSLTDWFDHITACYRWRTIEYYADRVKGNIQ 3062
Query: 497 LIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHM 556
LI++LD IGRTSE+ARLFGI+FY VLSRGSQ+RVES+MLR ++ N++AVSPS++QR+
Sbjct: 3063 LIKKLDLIGRTSELARLFGIEFYSVLSRGSQYRVESMMLRQAKGGNYIAVSPSVQQRSRS 3122
Query: 557 RAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 616
+APE +PL++EPESR Y DP+IVLDF SLYPS++IAYNYCFSTCLGRVEHL F G
Sbjct: 3123 KAPECIPLVMEPESRFYEDPVIVLDFASLYPSMMIAYNYCFSTCLGRVEHLAQGGEFVLG 3182
Query: 617 CIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
C L++ + L +L + I+P+G+AFV S+R G+LP+ML +IL+TR MVK+++K++
Sbjct: 3183 CRTLSIPPKQLDQLLASGGVHIAPNGIAFVKHSVRNGVLPRMLDQILNTRTMVKKALKDH 3242
Query: 675 KFSESLRNL 683
+ + L +
Sbjct: 3243 RGDKVLERM 3251
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 37/47 (78%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R Y DP+IVLDF SLYPS++IAYNYCFSTCLGRVEHL F GC
Sbjct: 3137 RFYEDPVIVLDFASLYPSMMIAYNYCFSTCLGRVEHLAQGGEFVLGC 3183
>gi|195332241|ref|XP_002032807.1| GM20982 [Drosophila sechellia]
gi|194124777|gb|EDW46820.1| GM20982 [Drosophila sechellia]
Length = 2127
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/496 (44%), Positives = 316/496 (63%), Gaps = 43/496 (8%)
Query: 196 SFIRKQLETPKRRICD-SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHA 254
SF+R+ + + R D S+ + T D T +++ L+NL + + ++ +LT++ +E+
Sbjct: 1247 SFLRQLEGSSQERQHDLSFGLSHATLDNTFGFKVNLENLQQAKADIDCNHLTIITLEVFV 1306
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNE 314
+R L+PDP +DE++ +FY + P+E +LP I +N V
Sbjct: 1307 STRGDLQPDPMHDEIRCLFYAIEHSLPDE-------------KLPSKACGYIMVNTV--- 1350
Query: 315 KELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDIL 374
++L S P I +IE V++E E F + +WD DI
Sbjct: 1351 QDLLSE--------GPFHGIDRDIEM---------QVVASEAEAFEALLALCGRWDADIF 1393
Query: 375 IGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRI 429
GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M GRI
Sbjct: 1394 AGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRI 1453
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
++++WRL+R E+ L SYTFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL
Sbjct: 1454 LLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWFG--SPCTRWIVMEYYLE 1511
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV G + L++QLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS
Sbjct: 1512 RVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPS 1571
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
++ RAHMRAPE L LI+EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG
Sbjct: 1572 VQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGG 1631
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
S F FG L VS + L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR MV
Sbjct: 1632 SSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMV 1691
Query: 668 KQSMKEYKFSESLRNL 683
KQSMK +K S +L+ +
Sbjct: 1692 KQSMKLHKDSTALQRI 1707
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1591 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1647
>gi|24586371|ref|NP_524881.2| mutagen-sensitive 205 [Drosophila melanogaster]
gi|11096179|gb|AAG30224.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
gi|21627721|gb|AAF59191.2| mutagen-sensitive 205 [Drosophila melanogaster]
Length = 2130
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/496 (44%), Positives = 316/496 (63%), Gaps = 43/496 (8%)
Query: 196 SFIRKQLETPKRRICD-SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHA 254
SF+R+ + + R D S+ + T D T +++ L+NL + + ++ +LT++ +E+
Sbjct: 1250 SFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLENLQQAKADIDCNHLTIITLEVFV 1309
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNE 314
+R L+PDP +DE++ +FY + P+E +LP I +N V
Sbjct: 1310 STRGDLQPDPMHDEIRCLFYAIEHSLPDE-------------KLPSKACGYIMVNTV--- 1353
Query: 315 KELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDIL 374
++L S P I +IE V++E E F + +WD DI
Sbjct: 1354 QDLLSE--------GPFHGIDRDIEV---------QVVTSEAEAFEALLALCERWDADIY 1396
Query: 375 IGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRI 429
GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M GRI
Sbjct: 1397 AGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRI 1456
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
++++WRL+R E+ L SYTFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL
Sbjct: 1457 LLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWFG--SPCTRWIVMEYYLE 1514
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV G + L++QLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS
Sbjct: 1515 RVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPS 1574
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
++ RAHMRAPE L LI+EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG
Sbjct: 1575 VQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGG 1634
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
S F FG L VS + L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR MV
Sbjct: 1635 SSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMV 1694
Query: 668 KQSMKEYKFSESLRNL 683
KQSMK +K S +L+ +
Sbjct: 1695 KQSMKLHKDSSALQRI 1710
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1594 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1650
>gi|195120055|ref|XP_002004544.1| GI19991 [Drosophila mojavensis]
gi|193909612|gb|EDW08479.1| GI19991 [Drosophila mojavensis]
Length = 2251
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/479 (45%), Positives = 306/479 (63%), Gaps = 40/479 (8%)
Query: 212 SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKA 271
S+ + T D T +++ L+NL + + +E YLT + +E+ +R L PDP +DE++
Sbjct: 1385 SFGLTNATLDNTFGFKVNLENLQQAKADIECNYLTTMTLELFVPTRGELLPDPLHDEIRC 1444
Query: 272 IFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPD 331
+FY + PE Q LP +K VS+ +++ S + D D
Sbjct: 1445 LFYAIEHSLPE-----------QSQSLP---SKACGYIIVSDSQDILSEGRHH--GLDAD 1488
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
I E V +E + F + +WD DI GYEIE SWGY++ER
Sbjct: 1489 I---------------ELQVVQSEAQAFEALLALCTRWDADIYAGYEIEMSSWGYVIERA 1533
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
L N+ LSR+ + R+ +E + + ++++ GRI++++WRL+R E+ L SY
Sbjct: 1534 KHLCFNIAPLLSRVPTQKVRDFVDEERESFTDLDVEMKLCGRILLDVWRLMRSEIALTSY 1593
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
+FEN+MYH+LH+R P HS + L+ W+ + +W+ +E+YL RV G + L++QLD +GR
Sbjct: 1594 SFENVMYHILHKRCPWHSPRALSDWYA--SPCTRWIVLEYYLERVRGTLALLDQLDLLGR 1651
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS++QRAHMRAPE L LI+
Sbjct: 1652 TSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPSVQQRAHMRAPEYLALIM 1711
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EPESR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG + F FG L VS +
Sbjct: 1712 EPESRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGSNTPFEFGASMLRVSRQL 1771
Query: 627 LKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L++L + +TISP GV FV + +R GILP+ML EILDTRLMVKQSMK ++ S +L+ +
Sbjct: 1772 LQQLLERDLVTISPCGVVFVKREVREGILPRMLSEILDTRLMVKQSMKLHRDSSALQRV 1830
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 43/55 (78%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG + F FG R S Q
Sbjct: 1716 RFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGSNTPFEFGASMLRVSRQ 1770
>gi|326676933|ref|XP_002665692.2| PREDICTED: DNA polymerase zeta catalytic subunit [Danio rerio]
Length = 1615
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/494 (43%), Positives = 317/494 (64%), Gaps = 56/494 (11%)
Query: 201 QLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALL 260
Q+E P C+SY +++ + NL E + E +LT++++E+HA +R L
Sbjct: 749 QIEGPS--FCNSYG-----------FKVSMQNLQEAKALHEVQHLTLMSMELHARTRRNL 795
Query: 261 KPDPAYDEVKAIFYYLYTCPPEED----RKVGIILIGQESELPEVRTKPIQMNFVSNEKE 316
+PDP +D + A+FY L + D R G I+I +ES
Sbjct: 796 EPDPEFDPICALFYCLSSDVLLHDSGTTRIEGAIVIDKES-------------------- 835
Query: 317 LFSTFIENVRQWDPDILIGYEIETFSWGYL-LERHFVSNEKELFSIFIENVRQWDPDILI 375
T + R P + F G L + +EKELF +R++DPDIL+
Sbjct: 836 --CTSAQASRSSTPFL--------FRCGVTGLPVTYTCDEKELFEEVSNIIRKYDPDILV 885
Query: 376 GYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS---SRDEVKN---TQLQMPGRI 429
GYE++ SWGYLL+R LG+NL Q+LSR+ ++N +DE T++ + GRI
Sbjct: 886 GYEVQMHSWGYLLQRASTLGVNLCQQLSRVPGDSQQNHFIPEKDEYGAETMTEIHITGRI 945
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
++N+WR+++ E L +YTFEN+ +H+LH+R PL+S + L+ W++ THL++W ++HY+
Sbjct: 946 ILNIWRIMKTEAALNNYTFENVAFHLLHQRYPLYSHRTLSDWFD--THLHRWKVMDHYVS 1003
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV G ++L++Q D IGRTSE+AR+FGIQFY VL+RGSQ+RVES+MLR+++ N++ V+PS
Sbjct: 1004 RVCGTVQLLQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRVAKPMNYIPVTPS 1063
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
+QRA RA + +PL++EPESR Y++ +IVLDFQSLYPS++IAYNYC+STCLG +E+LG
Sbjct: 1064 TQQRAQQRAAQCIPLVMEPESRFYSNSVIVLDFQSLYPSIVIAYNYCYSTCLGHIENLGT 1123
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQ 669
D F FGC L V L +L+ ++T+SP+GVAFV S+R G+LP+ML+EIL TR+MVKQ
Sbjct: 1124 YDEFKFGCASLRVPPDLLYQLRNDITVSPNGVAFVKSSVRRGVLPRMLEEILKTRIMVKQ 1183
Query: 670 SMKEYKFSESLRNL 683
SMK Y+ ++L L
Sbjct: 1184 SMKAYRNDKALSRL 1197
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ +IVLDFQSLYPS++IAYNYC+STCLG +E+LG D F FGC + R
Sbjct: 1085 RFYSNSVIVLDFQSLYPSIVIAYNYCYSTCLGHIENLGTYDEFKFGCASLR 1135
>gi|241751690|ref|XP_002400982.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
gi|215508272|gb|EEC17726.1| DNA polymerase zeta catalytic subunit, putative [Ixodes scapularis]
Length = 745
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 247/322 (76%), Gaps = 8/322 (2%)
Query: 368 QWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV------EKRNSSRDEVKNT 421
+WDPDIL+GYEI+ SWGYLLERG L L+L LSR+ + E + D V +
Sbjct: 5 RWDPDILVGYEIQKSSWGYLLERGSQLRLDLASMLSRVPQSPEEHPREAGDPEGDAVLDR 64
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
+ +PGRIV+NLWR++R EV L YTFEN+ YHV+H R+PL+S+K+LT W+ H T L W
Sbjct: 65 DVVVPGRIVLNLWRIMRKEVTLNIYTFENVYYHVVHRRVPLYSFKVLTEWFAHDTDL--W 122
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
TVEHY+IR G + L+++LD +G+TSEMAR+FGIQF+EVLSRGSQFRVES+MLRL+R
Sbjct: 123 RTVEHYVIRARGNLELLDRLDVVGKTSEMARIFGIQFFEVLSRGSQFRVESMMLRLARQR 182
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
VA+SPS++QRA MRA E +PL++EP+S LYT P+ VLDFQSLYPSV+IA+NYCFSTCL
Sbjct: 183 GLVALSPSVQQRARMRAMEFIPLVMEPQSHLYTSPVAVLDFQSLYPSVMIAHNYCFSTCL 242
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
GR++H G + F FGC L+V + L L++ +++SP+GVAFV S+R G+LP+ML+EIL
Sbjct: 243 GRLDHFGSGEPFVFGCSSLSVPVTLLNILREYISVSPAGVAFVQSSVRRGVLPQMLEEIL 302
Query: 662 DTRLMVKQSMKEYKFSESLRNL 683
+TRLMVKQSMKE K + LR +
Sbjct: 303 NTRLMVKQSMKECKDDKVLRKV 324
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
LYT P+ VLDFQSLYPSV+IA+NYCFSTCLGR++H G + F FGC
Sbjct: 213 LYTSPVAVLDFQSLYPSVMIAHNYCFSTCLGRLDHFGSGEPFVFGC 258
>gi|16198207|gb|AAL13918.1| LD40801p [Drosophila melanogaster]
Length = 1325
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/496 (44%), Positives = 316/496 (63%), Gaps = 43/496 (8%)
Query: 196 SFIRKQLETPKRRICD-SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHA 254
SF+R+ + + R D S+ + T D T +++ L+NL + + ++ +LT++ +E+
Sbjct: 445 SFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLENLQQAKADIDCNHLTIITLEVFV 504
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNE 314
+R L+PDP +DE++ +FY + P+E +LP I +N V
Sbjct: 505 STRGDLQPDPMHDEIRCLFYAIEHSLPDE-------------KLPSKACGYIMVNTV--- 548
Query: 315 KELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDIL 374
++L S P I +IE V++E E F + +WD DI
Sbjct: 549 QDLLSE--------GPFHGIDRDIEV---------QVVTSEAEAFEALLALCERWDADIY 591
Query: 375 IGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRI 429
GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M GRI
Sbjct: 592 AGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRI 651
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
++++WRL+R E+ L SYTFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL
Sbjct: 652 LLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWFG--SPCTRWIVMEYYLE 709
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV G + L++QLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS
Sbjct: 710 RVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPS 769
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
++ RAHMRAPE L LI+EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG
Sbjct: 770 VQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGG 829
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
S F FG L VS + L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR MV
Sbjct: 830 SSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMV 889
Query: 668 KQSMKEYKFSESLRNL 683
KQSMK +K S +L+ +
Sbjct: 890 KQSMKLHKDSSALQRI 905
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 789 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 845
>gi|194863706|ref|XP_001970573.1| GG23303 [Drosophila erecta]
gi|190662440|gb|EDV59632.1| GG23303 [Drosophila erecta]
Length = 1920
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/496 (44%), Positives = 316/496 (63%), Gaps = 43/496 (8%)
Query: 196 SFIRKQLETPKRRICD-SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHA 254
SF+R+ + + R D S+ + T D T +++ L+NL + S ++ +LT++ +E+
Sbjct: 1040 SFLRQLEGSSQERQHDLSFGLSHATLDNTFGFKVNLENLQQAKSDIDCNHLTIITLEVFV 1099
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNE 314
+R L+PDP +DE++ +FY + P+E+ LP +K V+
Sbjct: 1100 STRGDLQPDPMHDEIRCLFYAIEHSLPDEN-------------LP---SKACGYIMVNTA 1143
Query: 315 KELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDIL 374
++L S P I +IE V++E E F + +WD DI
Sbjct: 1144 QDLLSE--------GPFHGIDRDIEV---------QVVTSEAEAFEALLALCGRWDADIF 1186
Query: 375 IGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRI 429
GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M GRI
Sbjct: 1187 AGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRI 1246
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
++++WRL+R E+ L SYTFEN++YH+LH+R P H+ K LT W+ + +W+ +E+YL
Sbjct: 1247 LLDVWRLMRSEIALTSYTFENVIYHILHKRCPWHTPKSLTEWFA--SPCTRWIVMEYYLE 1304
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV G + L++QLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS
Sbjct: 1305 RVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPS 1364
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
++ RAHMRAPE L LI+EP+SR Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG
Sbjct: 1365 VQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGG 1424
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
S F FG L VS + L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR MV
Sbjct: 1425 SSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMV 1484
Query: 668 KQSMKEYKFSESLRNL 683
KQSMK +K S +L+ +
Sbjct: 1485 KQSMKLHKDSSALQRI 1500
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSLYPS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1384 QSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1440
>gi|11096177|gb|AAG30223.1| DNA polymerase zeta catalytic subunit [Drosophila melanogaster]
Length = 2130
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/496 (44%), Positives = 316/496 (63%), Gaps = 43/496 (8%)
Query: 196 SFIRKQLETPKRRICD-SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHA 254
SF+R+ + + R D S+ + T D T +++ L+NL + + ++ +LT++ +E+
Sbjct: 1250 SFLRQLEGSSQDRQHDLSFGLSHATLDNTFGFKVNLENLQQAKADIDCNHLTIITLEVFV 1309
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNE 314
+R L+PDP +DE++ +FY + P+E +LP I +N V
Sbjct: 1310 STRGDLQPDPMHDEIRCLFYAIEHSLPDE-------------KLPSKACGYIMVNTV--- 1353
Query: 315 KELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDIL 374
++L S P I +IE V++E E F + +WD DI
Sbjct: 1354 QDLLSE--------GPFHGIDRDIEV---------QVVTSEAEAFEALLALCERWDADIY 1396
Query: 375 IGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRI 429
GYEIE SWGY+++R L N+ LSR+ + R+ R++ + ++M GRI
Sbjct: 1397 AGYEIEMSSWGYVIDRAKHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRI 1456
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
++++WRL+R E+ L SYTFEN+MYH+LH+R P H+ K LT W+ + +W+ +E+YL
Sbjct: 1457 LLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWFG--SPCTRWIVMEYYLE 1514
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
RV G + L+EQLD +GRTSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS
Sbjct: 1515 RVRGTLTLLEQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKNLVPLSPS 1574
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 609
++ RAHMRAPE L LI+EP+SR Y DP+IVLDFQSL+PS+IIAYNYCFSTCLGRVEHLG
Sbjct: 1575 VQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLHPSMIIAYNYCFSTCLGRVEHLGG 1634
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
S F FG L VS + L+KL ++ +T+SP GV FV + +R GILP+ML EILDTR MV
Sbjct: 1635 SSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMV 1694
Query: 668 KQSMKEYKFSESLRNL 683
KQSMK +K S +L+ +
Sbjct: 1695 KQSMKLHKDSSALQRI 1710
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 44/57 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
+ R Y DP+IVLDFQSL+PS+IIAYNYCFSTCLGRVEHLG S F FG R S Q
Sbjct: 1594 QSRFYADPLIVLDFQSLHPSMIIAYNYCFSTCLGRVEHLGGSSPFEFGASQLRVSRQ 1650
>gi|410959876|ref|XP_003986524.1| PREDICTED: DNA polymerase zeta catalytic subunit [Felis catus]
Length = 3077
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 308/486 (63%), Gaps = 61/486 (12%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + + +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2235 VNTPKK---ETSQIDGPSLNNSYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLE 2291
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRK----VGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P D G+I+I ++ KP+
Sbjct: 2292 PDPEFDPICALFYCISSDTPLPDTDKTELTGVIVIDKD--------KPVSS--------- 2334
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + +EK LF ++++DPDIL+GY
Sbjct: 2335 -----QDIRYQTP-LLIRSGITG------LEVTYAPDEKALFQEIANIIKRYDPDILLGY 2382
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLL 437
EI+ SWGYLL+R L ++L Q +SR+ PG +
Sbjct: 2383 EIQMHSWGYLLQRAAALSVDLCQMISRV--------------------PGTKPCEYFM-- 2420
Query: 438 RHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRL 497
V L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G +++
Sbjct: 2421 ---VALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQM 2477
Query: 498 IEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMR 557
+EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+ MR
Sbjct: 2478 LEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMR 2537
Query: 558 APESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 617
AP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC
Sbjct: 2538 APQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGC 2597
Query: 618 IDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFS 677
L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 2598 TSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYKQD 2657
Query: 678 ESLRNL 683
+L +
Sbjct: 2658 RALSRM 2663
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 2551 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2601
>gi|1304154|dbj|BAA11461.1| DNA polymerase [Mus musculus]
Length = 755
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 266/347 (76%), Gaps = 8/347 (2%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE--V 408
+ ++EK LF ++++DPDIL+GYEI+ SWGYLL+R L ++L Q +SR+ + +
Sbjct: 3 YAADEKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDKI 62
Query: 409 EKR-NSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
E R + RD+ + +++ + GRI +NLWR++R+EV L +YTFEN+ +HVLH+R PL +
Sbjct: 63 ENRFAAERDDYGSDTMSEINIVGRITLNLWRIMRNEVGLTNYTFENVSFHVLHQRFPLFT 122
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++L+ W++++T LY+W V+HY+ RV G ++++EQLD IG+TSEMARLFGIQF VL+R
Sbjct: 123 FRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTR 182
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQ+RVES+MLR+++ N++ V+PSI+QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQS
Sbjct: 183 GSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQS 242
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++IAYNYCFSTCLG VE+LG D F FGC L V L +++ ++T+SP+GVAFV
Sbjct: 243 LYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQIRHDVTVSPNGVAFV 302
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
S+R G+LP+ML+EIL TRLMVKQSMK YK +L MLN+ L
Sbjct: 303 KPSVRKGVLPRMLEEILKTRLMVKQSMKSYKQDRALSR--MLNARQL 347
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNK 168
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R PP
Sbjct: 229 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR----VPP-- 282
Query: 169 DSIHEAEITHPDCSKSSQIDF-NPDLFKSFIRKQL-ETPKRRI-----CDSYAIDAMTPD 221
D ++ +I H + + F P + K + + L E K R+ SY D
Sbjct: 283 DLLY--QIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYKQDRALSR 340
Query: 222 TTGDYQMGLDNLNEVT 237
Q+GL + VT
Sbjct: 341 MLNARQLGLKLIANVT 356
>gi|297678910|ref|XP_002817299.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
[Pongo abelii]
Length = 3081
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 319/492 (64%), Gaps = 63/492 (12%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2227 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2283
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2284 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2322
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2323 -TVFSQDIRYQTP-LLIRSGITG------LEITYAADEKALFHEIANIIKRYDPDILLGY 2374
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2375 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2434
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2435 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2494
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++
Sbjct: 2495 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ 2554
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG
Sbjct: 2555 QRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLG--- 2611
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +R ++T+SP+G S+R G+LP+ML+EIL TR MVKQSM
Sbjct: 2612 -------KFTLQVR------HDITVSPNG-----PSVRKGVLPRMLEEILKTRFMVKQSM 2653
Query: 672 KEYKFSESLRNL 683
K Y+ +L +
Sbjct: 2654 KAYRQDRALSRM 2665
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 146
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG
Sbjct: 2574 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLG 2611
>gi|195027904|ref|XP_001986822.1| GH20319 [Drosophila grimshawi]
gi|193902822|gb|EDW01689.1| GH20319 [Drosophila grimshawi]
Length = 2215
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/479 (44%), Positives = 306/479 (63%), Gaps = 37/479 (7%)
Query: 212 SYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKA 271
S+ + T D T +++ L+NL + + +E YLT + +E+ +R L+PDP +DE++
Sbjct: 1347 SFGLSHATLDNTFGFKVNLENLQQAKADIECNYLTTMTLEVFVPTREELQPDPLHDEIRC 1406
Query: 272 IFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPD 331
+FY + P V LP +K V++ ++L + + D D
Sbjct: 1407 LFYAIEHSVPTSADAV--------ESLP---SKSCGYIIVNDAQDLLAEGRHH--GLDAD 1453
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
I + V +E + F + +WD DI GYEIE SWGY++ER
Sbjct: 1454 IQV---------------QVVQSEAQAFEALLALCARWDADIYAGYEIEMSSWGYIIERA 1498
Query: 392 YVLGLNLNQELSRITEVEKRN---SSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQSY 446
L N+ LSR+ + R+ R++ + ++M GRI++++WRL+R E+ L SY
Sbjct: 1499 KHLCFNIAPLLSRVPTQKVRDFVDEDREQFTDLDVEMKLCGRILLDVWRLMRSEIALTSY 1558
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
TFEN++YH+LH+R P HS + L+ W+ + +W+ +E+YL RV G + L++QLD +GR
Sbjct: 1559 TFENVIYHILHKRCPWHSARSLSDWFA--SPCTRWIVLEYYLERVRGTLALLDQLDLLGR 1616
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSEMA+L GIQFYEVLSRGSQFRVES+MLR+++ N V +SPS++QRAHMRAPE L LI+
Sbjct: 1617 TSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPRNLVPLSPSVQQRAHMRAPEYLALIM 1676
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EPESR Y DP+IVLDFQSLYPS+II YNYCFSTCLGRVEHLG S +F FG L VS +
Sbjct: 1677 EPESRFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGSSGTFEFGASQLRVSRQL 1736
Query: 627 LKK-LQQNL-TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L++ L++NL T+SP GV FV + +R GILP+ML EILDTR MVKQSMK ++ + +L+ +
Sbjct: 1737 LQQLLERNLVTVSPCGVVFVKREVREGILPRMLTEILDTRQMVKQSMKLHRDNSALQRV 1795
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 43/55 (78%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQ 163
R Y DP+IVLDFQSLYPS+II YNYCFSTCLGRVEHLG S +F FG R S Q
Sbjct: 1681 RFYADPLIVLDFQSLYPSMIIGYNYCFSTCLGRVEHLGSSGTFEFGASQLRVSRQ 1735
>gi|345482629|ref|XP_001607949.2| PREDICTED: DNA polymerase zeta catalytic subunit [Nasonia
vitripennis]
Length = 2007
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/459 (43%), Positives = 286/459 (62%), Gaps = 55/459 (11%)
Query: 232 NLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-CPPEEDRK---- 286
NL + + +LTVL +++H I+R L PDP D + A+FY ++ PP+ ++
Sbjct: 1158 NLGKAKALTTYQFLTVLCLDVHPITRPNLLPDPRQDRIAAVFYAIHNDVPPDWNQAKPLD 1217
Query: 287 VGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYL 346
G+I++ E + +I+ + G
Sbjct: 1218 CGVIIVDPEK-------------------------------------VNSKIKKLNGGTE 1240
Query: 347 LERH--FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR 404
E+ +V E+++F + +++ DP+ILIG++IE LSWGYL +R V G NL+ ++SR
Sbjct: 1241 QEQSLIYVEKEEDVFEEVVSLIQRCDPEILIGWDIEFLSWGYLFQRASVFGKNLSGKISR 1300
Query: 405 ITEVEKRNSSRDEVKNT---------QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
I + +R ++T ++++PGRIV+++WR++R E+ L YT+EN+MY+V
Sbjct: 1301 IPSAKCNWETRAHDESTTELHLETLVEVKLPGRIVLDIWRIMRSEIALTGYTYENVMYNV 1360
Query: 456 LHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++ERIP S+ LT WW +W +++Y +V G+ RL+ LD I RTSE ARL+G
Sbjct: 1361 MNERIPNPSFDTLTKWWNSSN--TQWRVIDNYSNKVIGVHRLLHHLDIINRTSEHARLYG 1418
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
IQFYEV SRGSQFRVES+MLRL++ N++AVSPS QR MRAPESLPLI+EPES +Y D
Sbjct: 1419 IQFYEVFSRGSQFRVESMMLRLAKPMNYIAVSPSAHQRGCMRAPESLPLIMEPESTMYLD 1478
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
P++VLDFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG L V KKLQ +
Sbjct: 1479 PVVVLDFQSLYPSIIIAYNYCFSTCLGRIEHIGSPHPFEFGATTLKVQKNLAKKLQNKMN 1538
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
+P GVAFV +R GILP+ML EIL+TRLMVK+++K++
Sbjct: 1539 FAPCGVAFVKSDVRRGILPRMLTEILETRLMVKKAIKDH 1577
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
+Y DP++VLDFQSLYPS+IIAYNYCFSTCLGR+EH+G F FG
Sbjct: 1475 MYLDPVVVLDFQSLYPSIIIAYNYCFSTCLGRIEHIGSPHPFEFGA 1520
>gi|357617710|gb|EHJ70950.1| putative DNA polymerase zeta catalytic subunit [Danaus plexippus]
Length = 1646
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/439 (44%), Positives = 283/439 (64%), Gaps = 39/439 (8%)
Query: 237 TSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-CPPEEDRKVGIILIGQE 295
T VE +LT++ +E+H +RA L PDPA D + A+F + CP + + I I
Sbjct: 869 TPTVETDFLTIMLLEVHTSTRADLYPDPAIDNIMAVFITVTNNCPADHYLQKNITEI--- 925
Query: 296 SELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
F+ ++K+ S ++ + Y + ++ NE
Sbjct: 926 --------------FIVDDKK-NSKYLNRC-------VFKYNV-----------NYAENE 952
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSR 415
EL +E V++ DPDI+ GY+IE+ SWGY+LER LGL + +ELSRITE ++ R
Sbjct: 953 NELLEKLVEMVKKHDPDIMCGYDIESNSWGYVLERSTALGLEMVRELSRITEKNRQKRYR 1012
Query: 416 DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
+ + ++ GRI N+WRL RHE+ L SY+FEN MY +L+ER+P +S++ LT WW H
Sbjct: 1013 QDENELEGRVIGRITFNVWRLFRHELALSSYSFENCMYAILNERVPKYSYRKLTEWWNHE 1072
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
+ + +W+ VE+YL +++G +R++++LD I RTSE+ARLFG+Q++EVLSRGSQFRVES+ML
Sbjct: 1073 SRILRWIPVEYYLTKLSGTVRMLDKLDMINRTSELARLFGLQWWEVLSRGSQFRVESLML 1132
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R +R N VA+SPS++QRA M+APE LPLI EPESR Y DP+IVLDFQSLYPS++IAYNY
Sbjct: 1133 RAARPLNLVALSPSVRQRAAMKAPECLPLIFEPESRFYKDPVIVLDFQSLYPSMMIAYNY 1192
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGIL 653
CFSTC+GR++++ + + FG L +S L+ L + L SP GV FV +S+R G+L
Sbjct: 1193 CFSTCIGRIQNINGKEPYEFGAWRLKISQNRLQTLANHNLLNWSPIGVGFVKQSVRRGVL 1252
Query: 654 PKMLQEILDTRLMVKQSMK 672
P +L+ IL R VK+ MK
Sbjct: 1253 PSLLRRILAARQAVKKGMK 1271
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R Y DP+IVLDFQSLYPS++IAYNYCFSTC+GR++++ + + FG
Sbjct: 1168 RFYKDPVIVLDFQSLYPSMMIAYNYCFSTCIGRIQNINGKEPYEFGA 1214
>gi|321470469|gb|EFX81445.1| hypothetical protein DAPPUDRAFT_303502 [Daphnia pulex]
Length = 794
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 256/344 (74%), Gaps = 14/344 (4%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV--E 409
V++E +LF + V W+PDI++GYEIE LSWGYLL+RG VLG+++ +LSRI +
Sbjct: 36 VTSEFDLFQELAKLVNFWNPDIVVGYEIEMLSWGYLLQRGTVLGIHVQNQLSRIPGAFPD 95
Query: 410 KRNSSRDEV--------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ +++ KN+ + + GRIV+NLWR+LR E+ LQSYTFEN+++H+LH R+
Sbjct: 96 RHGGIPEDIIEGGYMVEKNSDITIGGRIVLNLWRILRVEIALQSYTFENMVFHILHRRVS 155
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++ LT WW +++ +W VEHY+ RV G + L+EQLD IGRTSE+ARLFGIQFYEV
Sbjct: 156 TFPFEKLTRWW--KSNHDRWQVVEHYVSRVRGNMELMEQLDVIGRTSELARLFGIQFYEV 213
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
+RGSQ+RVES+MLRL++ NF+AVSPS+ QR+ M+APE LPLILEPES+ YTDP++VLD
Sbjct: 214 FTRGSQYRVESMMLRLAKPKNFIAVSPSVVQRSRMKAPEWLPLILEPESKFYTDPVLVLD 273
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPS 639
FQSLYPS+IIAYNYC+STCLGR + LG ++ F FGC L + ++KL Q + ISP+
Sbjct: 274 FQSLYPSMIIAYNYCYSTCLGRTQLLGKNEPFEFGCTQLLIPPAVVRKLVKQDLVNISPA 333
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
G FV +R GI+P+ML EIL+TR+MVKQSMKEY+ +LR +
Sbjct: 334 GAVFVKPEVRTGIIPQMLSEILNTRIMVKQSMKEYEGDTTLRRV 377
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 41/47 (87%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
+ YTDP++VLDFQSLYPS+IIAYNYC+STCLGR + LG ++ F FGC
Sbjct: 263 KFYTDPVLVLDFQSLYPSMIIAYNYCYSTCLGRTQLLGKNEPFEFGC 309
>gi|62088092|dbj|BAD92493.1| REV3-like, catalytic subunit of DNA polymerase zeta variant [Homo
sapiens]
Length = 750
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/456 (42%), Positives = 308/456 (67%), Gaps = 36/456 (7%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 318 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 374
Query: 262 PDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEV-RTKPIQMNFVSNEKELFST 320
PDP +D + A+FY I ++ LP+ +T+ + + +K +FS
Sbjct: 375 PDPEFDPICALFY----------------CISSDTPLPDTEKTELTGVIVIDKDKTVFS- 417
Query: 321 FIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIE 380
+++R P +LI I LE + ++EK LF ++++DPDIL+GYEI+
Sbjct: 418 --QDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGYEIQ 468
Query: 381 TLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVINLW 434
SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +NLW
Sbjct: 469 MHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITLNLW 528
Query: 435 RLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI 494
R++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G
Sbjct: 529 RIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGN 588
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+
Sbjct: 589 LQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRS 648
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F
Sbjct: 649 QMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFK 708
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
FGC L V L +++ ++T+SP+GVAFV + +C
Sbjct: 709 FGCTSLRVPPDLLYQVRHDITVSPNGVAFVKIANKC 744
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 665 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 715
>gi|427785295|gb|JAA58099.1| Putative dna polymerase [Rhipicephalus pulchellus]
Length = 4474
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 207/471 (43%), Positives = 290/471 (61%), Gaps = 50/471 (10%)
Query: 204 TPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPD 263
TP R + +D TG + + L T V LTVL+VE+H +R+ L+PD
Sbjct: 3633 TPPRHDTSTSQLDG----PTGRFALSGARLPADTERV----LTVLSVEVHVRTRSDLRPD 3684
Query: 264 PAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIE 323
P YD V+ + + C R G+ P++ + ++T
Sbjct: 3685 PEYDPVQCVLW----CA----RGYGM-------------DAPLEAGAMH-----WATVSG 3718
Query: 324 NVRQWDPDILIGYEIE-TFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETL 382
+ RQ D + + G + T L V +E +L ++ V +WDPD+L+GY++E
Sbjct: 3719 DPRQVDIEDIAGTSLHRTGVATPSLRTQVVRSELDLLHAVVDLVHRWDPDVLLGYDVERA 3778
Query: 383 SWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVN 442
SWGYL ER L L+L LSR R + GRI++ WR+LR EV
Sbjct: 3779 SWGYLCERAEHLDLDLYARLSRAPPPPGRKD-----------ILGRILLGAWRILRKEVA 3827
Query: 443 LQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLD 502
L YTFEN YHV+H R+PL+S++LL+ W+ L++W TVEHY +R G + L+++L+
Sbjct: 3828 LNIYTFENTYYHVMHRRVPLYSFRLLSEWFS--KDLFRWRTVEHYALRARGNLELLDELN 3885
Query: 503 FIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL 562
G+TS+MA +FGIQFYEVLSRGSQFRVES++LRL+R + VA+S S QRA RAPE +
Sbjct: 3886 VFGKTSQMASIFGIQFYEVLSRGSQFRVESMLLRLARSHRMVALSASTAQRARQRAPEFI 3945
Query: 563 PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNV 622
PL+LEP ++LYTDP++VLDFQSLYPSVII++NYCFSTCLGRVE+LG S PFGC L V
Sbjct: 3946 PLVLEPRAQLYTDPVVVLDFQSLYPSVIISHNYCFSTCLGRVENLG--SSAPFGCSSLEV 4003
Query: 623 SIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++ +K L+ ++T+SP+GVAFV SIR G+LP+ML E+L TR+MVK++M +
Sbjct: 4004 PLQCVKNLRDHITVSPAGVAFVKPSIRRGLLPQMLDEVLGTRIMVKKAMSQ 4054
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
R +LYTDP++VLDFQSLYPSVII++NYCFSTCLGRVE+LG S PFGC
Sbjct: 3952 RAQLYTDPVVVLDFQSLYPSVIISHNYCFSTCLGRVENLG--SSAPFGC 3998
>gi|198432213|ref|XP_002124430.1| PREDICTED: similar to REV3-like, catalytic subunit of DNA polymerase
zeta RAD54 like (S. cerevisiae) [Ciona intestinalis]
Length = 2161
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 306/504 (60%), Gaps = 58/504 (11%)
Query: 198 IRKQLETPKRRI--------CDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLA 249
+ KQ + KRR+ DS I DT G ++ ++L + + E ++T+L+
Sbjct: 1270 VSKQPASQKRRVSLSFKDTPADSEIIGPSLSDTYG-FRAKQEHLGDAKALHEVQHVTLLS 1328
Query: 250 VEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMN 309
+E+H +R L+PDP DE++A+FY + Q PE+ T I ++
Sbjct: 1329 IELHCKTRIDLRPDPEMDEIRALFYGV-----------------QTDSSPEIITGAILVD 1371
Query: 310 FVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQW 369
+ + L S L +V++E LF V
Sbjct: 1372 EQKSNRNLLHR---------------------SGVTCLNAVYVASENLLFEELASIVLLH 1410
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN-------TQ 422
DPD+L+GYEI+ LSWGYL R LG++L + +SR+ +K S D + ++
Sbjct: 1411 DPDMLLGYEIQMLSWGYLFARAAHLGVDLCRGISRVPG-DKTKSKMDAEADAYGADNMSE 1469
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW-WEHRTHLYKW 481
+ + GR+++N+WRL+R E+ L Y FE++ +H+LHER P++S++ LT +R + +
Sbjct: 1470 IHVVGRVMLNIWRLMRTELALCDYKFESVAFHLLHERHPVYSFQTLTQGISSNRGDVIRH 1529
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
+++Y+ RV G ++L+ Q D +GRTSE+ARLFGIQFY+VL+RG+QFRVES+MLR+
Sbjct: 1530 RVLDYYMCRVIGNLKLMSQQDMVGRTSELARLFGIQFYDVLTRGTQFRVESMMLRIVHSQ 1589
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
N+VAVSP+ QRA+M+APE + L++EPESR Y +P++V+DFQSLYPS+IIAYNYC+STCL
Sbjct: 1590 NYVAVSPNQMQRAYMKAPECIALVMEPESRFYHEPVVVVDFQSLYPSIIIAYNYCYSTCL 1649
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQE 659
GRV+HLG ++FPFGC L V R+L KL + +T++P+ VA+V IR GILP ML+E
Sbjct: 1650 GRVQHLGSHNNFPFGCTSLKVPPRTLHKLLKRDGVTVAPNAVAYVKSFIRKGILPTMLEE 1709
Query: 660 ILDTRLMVKQSMKEYKFSESLRNL 683
IL+TR+MVK S+K+ S + R L
Sbjct: 1710 ILETRIMVKTSIKKCDDSATKRML 1733
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 44/49 (89%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIA 157
R Y +P++V+DFQSLYPS+IIAYNYC+STCLGRV+HLG ++FPFGC +
Sbjct: 1619 RFYHEPVVVVDFQSLYPSIIIAYNYCYSTCLGRVQHLGSHNNFPFGCTS 1667
>gi|443719046|gb|ELU09367.1| hypothetical protein CAPTEDRAFT_153186 [Capitella teleta]
Length = 768
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 254/342 (74%), Gaps = 9/342 (2%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE--- 407
+V E++L I+ VR+WDPDIL+G+EI+ SWG++++R L LNL + LSR+ E
Sbjct: 14 YVPTEEQLIDELIQLVRKWDPDILVGFEIQKASWGFIIKRACHLNLNLIKLLSRLHEDNP 73
Query: 408 -VEKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
E + + D+++ + +++ GRIVINLWR+LRHE+ L YTFEN+++H LH+R+P +
Sbjct: 74 VSENKQADADDLEAEAISDIKISGRIVINLWRVLRHELTLNVYTFENVVFHALHKRVPRY 133
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
S++ L+ W++++T L++W +E+Y IR + I +++ LD I TSE AR+FGI+FY VLS
Sbjct: 134 SFRCLSDWYDNKTDLHRWRVIEYYTIRSSDCIAIMKHLDLISTTSEFARVFGIEFYHVLS 193
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RGSQ+RVES+MLR+++ N++ VSPS +QRA RAPE +PL +EP SR YT P++VLDFQ
Sbjct: 194 RGSQYRVESMMLRIAKPLNYIPVSPSPQQRAAQRAPECIPLTMEPVSRFYTHPVVVLDFQ 253
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVS--DSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS++IAYNYCF++CLGR++ L + F FGC LN+ LK L++++ I P+GV
Sbjct: 254 SLYPSIMIAYNYCFTSCLGRLDCLAKAGYGPFNFGCSSLNIPPSVLKSLEKDVNICPNGV 313
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
F ++S+R G+LP M++EIL+TRLMVK+SMK+ K ++L+ +
Sbjct: 314 VFANQSVRKGVLPLMVEEILNTRLMVKKSMKDCKDDKTLQKM 355
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 70 ESSLERSMKPDD----RPSPT-RKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP + PSP R + M P S R YT P++VLDFQSLY
Sbjct: 201 ESMMLRIAKPLNYIPVSPSPQQRAAQRAPECIPLTMEPVS----RFYTHPVVVLDFQSLY 256
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVS--DSFPFGC 155
PS++IAYNYCF++CLGR++ L + F FGC
Sbjct: 257 PSIMIAYNYCFTSCLGRLDCLAKAGYGPFNFGC 289
>gi|350578361|ref|XP_003480350.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Sus scrofa]
Length = 721
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 240/307 (78%), Gaps = 6/307 (1%)
Query: 383 SWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVINLWRL 436
SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +NLWR+
Sbjct: 3 SWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITLNLWRI 62
Query: 437 LRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIR 496
+R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G ++
Sbjct: 63 MRNEVALNNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQ 122
Query: 497 LIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHM 556
++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS++QR+ M
Sbjct: 123 MLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQM 182
Query: 557 RAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 616
RAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FG
Sbjct: 183 RAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKHDEFKFG 242
Query: 617 CIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKF 676
C L V L +++ ++T+SP+G+AFV S+R G+LP+ML+EIL TRLMVKQSMK YK
Sbjct: 243 CTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYKQ 302
Query: 677 SESLRNL 683
+L +
Sbjct: 303 DRALSRM 309
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 197 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKHDEFKFGCTSLR 247
>gi|339242365|ref|XP_003377108.1| DNA polymerase family B, exonuclease domain protein [Trichinella
spiralis]
gi|316974121|gb|EFV57647.1| DNA polymerase family B, exonuclease domain protein [Trichinella
spiralis]
Length = 1170
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 189/439 (43%), Positives = 272/439 (61%), Gaps = 39/439 (8%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
L +++E+H +R +PDP D + AIFY ++ + G I++ +E
Sbjct: 697 LCTMSMELHVCTRDNFRPDPQLDPIVAIFYAVHVNGHDCIDHFGCIVVSEE--------- 747
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
E F ++ +PD+ I V E EL F
Sbjct: 748 ---------EAAFRQQFATTIQCCEPDLSI----------------CVQTEFELLEQFSN 782
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--RNSSRDEV-KNT 421
V +DPD+++GYEI+ LSWGYL ER LG+++ SRI + K R+SS D+
Sbjct: 783 IVSNFDPDVIVGYEIQMLSWGYLFERASFLGMDMCTRCSRIPDKNKQSRSSSDDDWWSMA 842
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
+ + GRIV+NLW ++R V L YTFEN+++HVL +R+P +S++ LT W H T +W
Sbjct: 843 NIHVAGRIVLNLWHIMRSVVTLGIYTFENVVFHVLRKRVPFYSFEQLTHW--HTTSHSRW 900
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
++Y +RV + ++ Q D + RTSE+ARLFGIQF++VLSRGSQFRVES++LR+++
Sbjct: 901 RVYDYYKLRVCANLEMLIQRDILNRTSELARLFGIQFFDVLSRGSQFRVESMLLRMTKAR 960
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
FV++SP+ QR M APE LPL LEPES+LY DP++VLDFQSLYPS+ IAYNYC+STCL
Sbjct: 961 QFVSLSPNPFQRRRMEAPECLPLNLEPESQLYHDPVVVLDFQSLYPSICIAYNYCYSTCL 1020
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
G+V+ L +D FGC L+V L KL+ +L +SP+GVAFV+ +R GILP+ML+EIL
Sbjct: 1021 GKVKKLRKADLITFGCSTLSVPSALLAKLRPHLNVSPAGVAFVNSDLRRGILPQMLEEIL 1080
Query: 662 DTRLMVKQSMKEYKFSESL 680
TR+MVK+ M++Y ++ L
Sbjct: 1081 STRVMVKRCMQQYSTNKPL 1099
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
+LY DP++VLDFQSLYPS+ IAYNYC+STCLG+V+ L +D FGC
Sbjct: 990 QLYHDPVVVLDFQSLYPSICIAYNYCYSTCLGKVKKLRKADLITFGC 1036
>gi|196017075|ref|XP_002118384.1| hypothetical protein TRIADDRAFT_34116 [Trichoplax adhaerens]
gi|190579014|gb|EDV19123.1| hypothetical protein TRIADDRAFT_34116 [Trichoplax adhaerens]
Length = 740
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 239/321 (74%), Gaps = 9/321 (2%)
Query: 369 WDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE------VEKRNSSRDEVKNTQ 422
WDPDILIGYEI+ LSWGY+ +R L + L LSRI E +E ++S K T
Sbjct: 4 WDPDILIGYEIQMLSWGYVFDRAKFLKIGLAPRLSRIPEQKIRSQIELTDNSLARYK-TD 62
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWM 482
L + GRI++N+WR++R EV L YTFEN+ YHVLH+R+P +S++ LT ++ +H +W
Sbjct: 63 LFVIGRILLNVWRIVRSEVTLNIYTFENVSYHVLHQRVPHYSFETLTEYFNQDSH--RWK 120
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
T+E+YL+R L+ +LD +G TSE ARLFGI FY VLSRGSQFRVES+MLR+++ N
Sbjct: 121 TIEYYLMRCRSNFLLLNELDTVGLTSEFARLFGIPFYSVLSRGSQFRVESMMLRIAKPMN 180
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
++AVSPS QRA MRAPE + LILEPESR Y+DP++VLDFQSLYPS+IIAYNYCFSTCLG
Sbjct: 181 YIAVSPSPDQRAMMRAPEVISLILEPESRFYSDPVVVLDFQSLYPSIIIAYNYCFSTCLG 240
Query: 603 RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILD 662
V+++ +S FGC L V + ++KK++++ T+SP+G+AFV +IR G+LP+ML+EIL+
Sbjct: 241 NVKNIITDESRQFGCTTLRVPLATMKKIKEDYTVSPTGLAFVKSNIRKGVLPRMLEEILN 300
Query: 663 TRLMVKQSMKEYKFSESLRNL 683
TR+MVK +MK+ K ++L L
Sbjct: 301 TRVMVKGAMKKNKGDKALERL 321
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 70 ESSLERSMKPDD----RPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYP 125
ES + R KP + PSP ++ S + S R Y+DP++VLDFQSLYP
Sbjct: 169 ESMMLRIAKPMNYIAVSPSPDQRAMMRAPEVISLILEPES---RFYSDPVVVLDFQSLYP 225
Query: 126 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
S+IIAYNYCFSTCLG V+++ +S FGC R
Sbjct: 226 SIIIAYNYCFSTCLGNVKNIITDESRQFGCTTLR 259
>gi|449668904|ref|XP_004206894.1| PREDICTED: uncharacterized protein LOC100213595 [Hydra
magnipapillata]
Length = 2098
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 274/457 (59%), Gaps = 46/457 (10%)
Query: 211 DSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVK 270
+S I+ TP+ T ++ N++ + N LT++++E+H +R L+PDP D +
Sbjct: 1291 NSSDIEGFTPNNTYAFKTTQQNISNAKAIHFNQSLTIVSIELHIQTRRNLRPDPTIDPIN 1350
Query: 271 AIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDP 330
+IFY ++ EL + + F T + Q
Sbjct: 1351 SIFYTMH------------------QELLNIDVSGV-----------FITDTCMISQNST 1381
Query: 331 DILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER 390
+L I S H S+E + F +++ DPDIL+GYE++ LS GYL+ER
Sbjct: 1382 QLLKKAGIAISS------THCFSDELLMLKGFSSFIQEHDPDILVGYEVQMLSIGYLIER 1435
Query: 391 GYVLGLNLNQELSRI--TEVEKRNSSRDEVKN-----TQLQMPGRIVINLWRLLRHEVNL 443
L N+ +SRI TEV + +D+ N +++ GRI++NLWR++R E+ L
Sbjct: 1436 AAALNYNMCHAMSRISSTEVYSKKIQKDQEDNWFGQLVSMEITGRIILNLWRIMRSEIAL 1495
Query: 444 QSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDF 503
Q YTFEN+ YH+ H+R+ +S+ L+ WW T+ +W +++YL R G IRL++Q+DF
Sbjct: 1496 QIYTFENVFYHICHQRVAAYSFCSLSEWW--LTNSSRWRVIDYYLKRCQGNIRLLDQIDF 1553
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
I RTSE+AR+FGI FY V+SRGSQFRVES+MLR+++ NF+ +SPS QRA M APE +P
Sbjct: 1554 INRTSELARIFGILFYSVISRGSQFRVESMMLRIAKPMNFIPMSPSPHQRARMSAPECIP 1613
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
L++EPESR Y DP+IVLDFQSLYPS+IIAYNYCFSTC+GRV+ ++ F FG LN+
Sbjct: 1614 LVMEPESRFYVDPVIVLDFQSLYPSIIIAYNYCFSTCIGRVKLCAENELFNFGAASLNLP 1673
Query: 624 IRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQ 658
L++L N+ ISP+GV FV K +R GI+P+ ++
Sbjct: 1674 FHVLQELLNDSNVHISPNGVGFVKKDVRTGIIPRFIE 1710
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIA 157
R Y DP+IVLDFQSLYPS+IIAYNYCFSTC+GRV+ ++ F FG +
Sbjct: 1621 RFYVDPVIVLDFQSLYPSIIIAYNYCFSTCIGRVKLCAENELFNFGAAS 1669
>gi|326426951|gb|EGD72521.1| DNA polymerase zeta catalytic subunit [Salpingoeca sp. ATCC 50818]
Length = 2703
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 195/501 (38%), Positives = 291/501 (58%), Gaps = 58/501 (11%)
Query: 205 PKR-RICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPD 263
PKR + +TP T ++M +++ T+ +LT+L++E+ A SR + D
Sbjct: 1821 PKRPKGSGGSRTKGVTPGDTYGFKMETQHVSHTTALQTQQHLTLLSLELMADSRGQKQSD 1880
Query: 264 PAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIE 323
P +D + A+F ++ + E K + M ++ + ++ +
Sbjct: 1881 PEFDPILALF----------------CVVHDDQEPTASAVKKVVMTHRTSSQAGATSAML 1924
Query: 324 NVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLS 383
+R+ D ++E++ +E+E+ FIE ++ DPD++IGYEI+ S
Sbjct: 1925 GLRRVD----------------VIEKN---SEREMLDTFIEWLQTLDPDLIIGYEIQMGS 1965
Query: 384 WGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN-------TQLQMPGRIVINLWRL 436
WGYL++RG VLGL++ LSR + +D+ N ++ ++ GR+++NLWRL
Sbjct: 1966 WGYLIQRGQVLGLDMVVLLSRTPSTSSSSGFKDDTTNEYGARHTSEFRIVGRVILNLWRL 2025
Query: 437 LRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL-YKWMTVEHYLIRVTGII 495
LRHE+ L SY+FEN+M+H+LH R+P +S + L W+ H TH +W +H L R +
Sbjct: 2026 LRHELALTSYSFENVMFHILHRRVPAYSQQQLRNWY-HNTHAPLRWRVCKHLLFRALSCL 2084
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+L+ +++FI RTSE ARLFGI FYEV+SRGSQFRVESIMLR++ NF+ +SPS Q +
Sbjct: 2085 QLMYEINFIERTSEFARLFGILFYEVISRGSQFRVESIMLRIAHPRNFIMISPSKDQVRN 2144
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV----------- 604
RAPE+LPLILEPES+ Y+ P++VLDFQSLYPS++IAYN CFSTCLGRV
Sbjct: 2145 QRAPEALPLILEPESKFYSSPVLVLDFQSLYPSMMIAYNICFSTCLGRVPGTATRRAAYG 2204
Query: 605 --EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILD 662
+ G F DL + S Q + I P+GV F + +R G+LP ML EIL
Sbjct: 2205 DGDAGGSGTKFGVSHFDLPPGLLSDLVDQDLVHICPNGVMFCKRELRGGVLPVMLDEILR 2264
Query: 663 TRLMVKQSMKEYKFSESLRNL 683
TR+MVKQSMKE S+++ L
Sbjct: 2265 TRIMVKQSMKESDVSQAMHRL 2285
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
+ Y+ P++VLDFQSLYPS++IAYN CFSTCLGRV
Sbjct: 2160 KFYSSPVLVLDFQSLYPSMMIAYNICFSTCLGRV 2193
>gi|196017081|ref|XP_002118387.1| hypothetical protein TRIADDRAFT_34128 [Trichoplax adhaerens]
gi|190579017|gb|EDV19126.1| hypothetical protein TRIADDRAFT_34128 [Trichoplax adhaerens]
Length = 765
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/324 (50%), Positives = 237/324 (73%), Gaps = 12/324 (3%)
Query: 368 QWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN------- 420
+WDPDIL+GYEI+ LSWGYLL+R L ++L LSR+ V N + E++N
Sbjct: 16 RWDPDILVGYEIQMLSWGYLLQRSKSLQIDLATLLSRVPSVN--NKFQLELENDFQANYK 73
Query: 421 TQLQMPGRIVINLWRLLRHEV-NLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLY 479
T + + GR+++N+WR++R+EV L+SYTFE+++ HVLH R LH+++ LT W+ +
Sbjct: 74 TDVFIVGRVIVNIWRIMRYEVVALRSYTFESVIDHVLHRRHALHTFRSLTDWFHDDRN-- 131
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
+W T+E+Y+IR G RL+E D I R+SE ARL+GIQFY VLSRGSQFR+ES++LRL++
Sbjct: 132 RWRTIEYYIIRCRGNWRLLETFDMIDRSSEFARLYGIQFYSVLSRGSQFRIESMLLRLAK 191
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
N++ VS S KQR M+APE +PL++EPESR Y++P++VLDFQSLYPSV+IAYNYC++T
Sbjct: 192 PMNYIPVSVSEKQRTWMKAPEVIPLVMEPESRFYSNPVLVLDFQSLYPSVMIAYNYCYTT 251
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
CLGR+ + F FGC V + LKKL+ +++I+P G +V IR G++P+ML+E
Sbjct: 252 CLGRISGIATDKEFKFGCTSHQVPLSLLKKLRNDISIAPCGAVYVKDHIRKGVIPRMLKE 311
Query: 660 ILDTRLMVKQSMKEYKFSESLRNL 683
ILDTR+M+K++MK+ K ++SL L
Sbjct: 312 ILDTRIMIKRAMKDCKDNKSLHRL 335
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSP 165
R Y++P++VLDFQSLYPSV+IAYNYC++TCLGR+ + F FGC S+Q P
Sbjct: 223 RFYSNPVLVLDFQSLYPSVMIAYNYCYTTCLGRISGIATDKEFKFGC----TSHQVP 275
>gi|391334923|ref|XP_003741848.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1420
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 264/442 (59%), Gaps = 40/442 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--GQESELPEVR 302
LT L E+H +R LKPDP+ D + A+ + L+ P E K+ + ++ G ++P R
Sbjct: 585 LTSLCCEVHCATRENLKPDPSIDPLLAVVFVLHRDYPGEGEKLQLKVVYDGCVDQVPLRR 644
Query: 303 T--------KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV-- 352
+ +++ S E E+ E + +WDPD+++GYE +T SWGYL++R
Sbjct: 645 SLLSEIGGIASVELVKCSGELEIIKRMCEIIVKWDPDVVLGYETDTLSWGYLIDRCLALE 704
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
N K LFS + +P + E+ G+ +Q+ R E
Sbjct: 705 LNPKLLFSRVAIEMPIDEPGVSHTVEMPP-------------GVRFDQDKERYFE----- 746
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
+ + ++ GR+++N+WR++R E+ L +Y+FEN+ YH+LH R + SW L W+
Sbjct: 747 -------SWEYRLTGRVLLNVWRMMRKEIALTNYSFENVYYHILHRREHVVSWGRLRTWY 799
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
E + K + + R G LIE+L+ +T EMAR++GIQFYEVLSRGSQFRVES
Sbjct: 800 EDPLQMSK--CISYLAKRCAGCFHLIEKLELYTKTCEMARIYGIQFYEVLSRGSQFRVES 857
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+MLR +R +VA SP++ R+ R+PE +PL++EP S YTDP+++LDFQSLYPS++IA
Sbjct: 858 MMLRSTRKKGYVAFSPTVLDRSLQRSPEWIPLVMEPYSNFYTDPLVILDFQSLYPSLMIA 917
Query: 593 YNYCFSTCLGRVEH-LGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
YNYCFSTC G+V+ + S S FGC DL V LK+L+ ++ ISPSG FV IR G
Sbjct: 918 YNYCFSTCFGKVQDIIKGSGSIKFGCGDLAVDAEELKRLKDDIIISPSGSVFVKSHIRRG 977
Query: 652 ILPKMLQEILDTRLMVKQSMKE 673
ILP++++EI++TR MVK+ MK+
Sbjct: 978 ILPRLVEEIINTRFMVKKGMKK 999
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 30/154 (19%)
Query: 20 PWQLSSV--HRCNQCGACFHTKCHSQLPCKRCIRMRIRRDSMKGIVDVKCFE-------- 69
P Q+S + +C CFH +L K C M I ++ +E
Sbjct: 802 PLQMSKCISYLAKRCAGCFHLIEKLELYTKTC--------EMARIYGIQFYEVLSRGSQF 853
Query: 70 --ESSLERSMKPDDRP--SPTRKNKSTRSS---FDSDMFPSSSSRDRLYTDPIIVLDFQS 122
ES + RS + SPT ++S + S M P S+ YTDP+++LDFQS
Sbjct: 854 RVESMMLRSTRKKGYVAFSPTVLDRSLQRSPEWIPLVMEPYSN----FYTDPLVILDFQS 909
Query: 123 LYPSVIIAYNYCFSTCLGRVEH-LGVSDSFPFGC 155
LYPS++IAYNYCFSTC G+V+ + S S FGC
Sbjct: 910 LYPSLMIAYNYCFSTCFGKVQDIIKGSGSIKFGC 943
>gi|330793739|ref|XP_003284940.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
gi|325085156|gb|EGC38569.1| hypothetical protein DICPUDRAFT_148772 [Dictyostelium purpureum]
Length = 2213
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/464 (39%), Positives = 280/464 (60%), Gaps = 54/464 (11%)
Query: 242 NYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEV 301
N LT+L++EIH+ SR LKP+P D V+AIFY C +ED I L G++ +
Sbjct: 1338 NQNLTLLSLEIHSNSRGKLKPNPEIDSVQAIFY----CIRDED---SIELEGEQYQ---- 1386
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
K I I++ ++G + V +E EL
Sbjct: 1387 DIKGI-------------------------IMVSSTTNDNNYGLDCSINRVKDEIELLKS 1421
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI------TEVEKRNS-- 413
FI+ +R +D DI++G+EI+ S GYL+ER + LG +L E+SR+ +E KR++
Sbjct: 1422 FIQLIRSYDIDIIVGFEIQMNSLGYLIERSHHLGFSLCDEVSRVISPIKGSEYSKRSNFF 1481
Query: 414 SRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
S+D + +++ GRIV+NLWR+LRHE+ + +YT+EN+ Y VL++R +S + L
Sbjct: 1482 SKDRDPYGFEHQSGIKIVGRIVLNLWRILRHEITIDNYTYENLCYKVLNKRQEEYSNEKL 1541
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
T W+ +W + + L V L+ DFI +TSE+AR++GI FY V+SRGSQ+
Sbjct: 1542 TQWYSDNRQ--RWRVLNYNLRHVENNFNLLYSFDFIRKTSELARVYGIDFYSVVSRGSQY 1599
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
RVES++LRL++ +NF+ +SP+ ++ PES+PL+++P SRLY P++VLDFQSLYPS
Sbjct: 1600 RVESMLLRLTKPDNFILLSPTREEVMSQPMPESIPLVMDPLSRLYNSPVVVLDFQSLYPS 1659
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTISPSGVAFVDKS 647
++IAYNYCFSTCLGRV+ L + FG L + L+ + N+TISP+ V + KS
Sbjct: 1660 IMIAYNYCFSTCLGRVDPLDEINRKKFGASYLEMKPGLLESISLDNITISPNNVMYTKKS 1719
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
+R GI P++LQE+LDTR+MVK++MK K S + ++LN+ L
Sbjct: 1720 VRHGIFPRLLQEVLDTRIMVKRAMK--KSSNDKKTYSILNARQL 1761
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTR---SSFDSDMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES L R KPD+ SPTR+ ++ S M P S RLY P++VLDFQSLY
Sbjct: 1602 ESMLLRLTKPDNFILLSPTREEVMSQPMPESIPLVMDPLS----RLYNSPVVVLDFQSLY 1657
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
PS++IAYNYCFSTCLGRV+ L + FG
Sbjct: 1658 PSIMIAYNYCFSTCLGRVDPLDEINRKKFGA 1688
>gi|149582152|ref|XP_001517555.1| PREDICTED: DNA polymerase zeta catalytic subunit-like, partial
[Ornithorhynchus anatinus]
Length = 434
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 199/252 (78%)
Query: 440 EVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIE 499
EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV G ++++E
Sbjct: 160 EVALTNYTFENVGFHVLHQRFPLFTFRILSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLE 219
Query: 500 QLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAP 559
QLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++ N++ V+PS +QR+ MRAP
Sbjct: 220 QLDIIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSAQQRSRMRAP 279
Query: 560 ESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCID 619
+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC
Sbjct: 280 QCIPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTS 339
Query: 620 LNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSES 679
L V L +++ ++T+SP+GVAFV S+R G+LPKML+EIL TR+MVKQSMK YK +
Sbjct: 340 LRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPKMLEEILKTRIMVKQSMKSYKHDRA 399
Query: 680 LRNLTMLNSMLL 691
L + M L
Sbjct: 400 LSRMLEARQMGL 411
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNK 168
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R PP
Sbjct: 291 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKFDEFKFGCTSLR----VPP-- 344
Query: 169 DSIHEAEITHPDCSKSSQIDF-NPDLFKSFIRKQL-ETPKRRI-----CDSYAIDAMTPD 221
D ++ +I H + + F P + K + K L E K RI SY D
Sbjct: 345 DLLY--QIRHDITVSPNGVAFVKPSVRKGVLPKMLEEILKTRIMVKQSMKSYKHDRALSR 402
Query: 222 TTGDYQMGLDNLNEVT 237
QMGL + VT
Sbjct: 403 MLEARQMGLKLIANVT 418
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 8/97 (8%)
Query: 369 WDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN---SSRDEVKN---TQ 422
+DPDIL+GYEI+ SWGYLL+R L ++L Q +SR+ + +K N + RDE + ++
Sbjct: 1 YDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDKKENRFAAERDEYGSDTMSE 60
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + GRI +NLWR++R+EV Q+ T ++ H R
Sbjct: 61 INIVGRITLNLWRIMRNEV--QNLTLISVELHARTRR 95
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 211 DSYAIDAMTP-DTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEV 269
D Y D M+ + G + L + + + V+N LT+++VE+HA +R LKPDP +D +
Sbjct: 51 DEYGSDTMSEINIVGRITLNLWRI--MRNEVQN--LTLISVELHARTRRDLKPDPEFDPI 106
Query: 270 KAIFYYLYTCPPEEDRK----VGIILIGQE 295
A+FY + + DR+ G+I+I ++
Sbjct: 107 CALFYCVSSDTALPDREKTELTGVIVIDKD 136
>gi|402221982|gb|EJU02050.1| hypothetical protein DACRYDRAFT_107768 [Dacryopinax sp. DJM-731 SS1]
Length = 1592
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 274/491 (55%), Gaps = 49/491 (9%)
Query: 206 KRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPA 265
KRR +D MTP + + +E ++ E ++VLAVEI A SR L PDPA
Sbjct: 725 KRRKQAQSQLDGMTPAKGYGIRATMHRPSEFSTR-EKQNMSVLAVEIFARSRGRLLPDPA 783
Query: 266 YDEVKAIFYYLYTCPPEEDR---KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFI 322
DE+ + + E R +VG+IL+ P+V + ++L S +
Sbjct: 784 EDEISMVAFAFQDDAGEGGRDTYEVGLILVAN----PQVDATRL--------RDLASANV 831
Query: 323 ENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETL 382
+ V E EL + I+ V WDPD+L G+++++
Sbjct: 832 D---------------------------MVDAESELINKLIDRVLDWDPDVLTGWDVQSS 864
Query: 383 SWGYLLERGYVLGLNLNQELSRITEVEKRNS-SRDEVKNTQ-LQMPGRIVINLWRLLRHE 440
SW YL R G++L+ ++SR+ RN R + +T ++ GR VIN+WR LR E
Sbjct: 865 SWSYLAGRAKQYGVDLSDQISRVMSPPSRNGQDRWSLTHTSTFRVSGRHVINVWRHLRKE 924
Query: 441 VNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQ 500
+ L SYTFEN+ + VL R+PL+ LT W+ L+ +++ L R +I ++++
Sbjct: 925 LTLTSYTFENVAFQVLKRRMPLYLASTLTQWFHSPVPLHTAQLIDYLLERTVTVIEILDE 984
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+ I +T+E AR+FG++F+ VL RGSQ+ VES M R+++ NFV +SPS +Q A E
Sbjct: 985 TELITKTAEFARVFGVEFFSVLERGSQYMVESFMFRIAKPENFVLISPSKEQVGQQNAAE 1044
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
+PLI+EP+S Y P++VLDFQSLYPS++IAYNYC+STCLGRV + FG DL
Sbjct: 1045 CVPLIMEPQSACYKGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVRNFKGKSK--FGVTDL 1102
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
++ L+ L+ ++TIS +G+ FV +R +L KML E+LDTR+MVKQ MK K +SL
Sbjct: 1103 SIPPGVLELLKDDITISANGMMFVKDHVRRSLLSKMLSELLDTRVMVKQGMKTAKGDKSL 1162
Query: 681 RNLTMLNSMLL 691
L +LN+ L
Sbjct: 1163 --LRLLNARQL 1171
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 7/53 (13%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH------LGVSD-SFPFGCI 156
Y P++VLDFQSLYPS++IAYNYC+STCLGRV + GV+D S P G +
Sbjct: 1057 YKGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVRNFKGKSKFGVTDLSIPPGVL 1109
>gi|167518151|ref|XP_001743416.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778515|gb|EDQ92130.1| predicted protein [Monosiga brevicollis MX1]
Length = 887
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 278/499 (55%), Gaps = 63/499 (12%)
Query: 184 SSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENY 243
S+Q+ N D + + +++ P T + + +L++ T
Sbjct: 2 SAQLSKNDDPYAAGSHARVQGPAN-------------AATFGFDLATQHLSDATLLQAQQ 48
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIF---YYLYTCPPEEDRKVGIILIGQESELPE 300
++TV+++E+H+ S+ + DP +D + A+ ++ T P RK+ ++ G PE
Sbjct: 49 HVTVVSLELHSHSQGARESDPRHDPILALILCAWFDDTIQPLRQRKL-VLWWGAADTEPE 107
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+E+ W G ++ E+ L
Sbjct: 108 ------------HER------------WGLPNFTGVRFDS--------------EELLLR 129
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSR----- 415
++ + +WDP++L+GYE++ SWGYL+ERG+ LG+++ ELSRI E SR
Sbjct: 130 GLVDRILRWDPEVLVGYEVQMRSWGYLVERGWHLGVDVCMELSRIHEQPTPEKSRLDPHG 189
Query: 416 -DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
K ++L++PGRI++NLWR++RHE+ L SY+FENI YHVLH R+ + L W++
Sbjct: 190 YHARKTSELRVPGRILLNLWRIMRHELALTSYSFENICYHVLHRRVAHVRQQQLRDWYQS 249
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ ++W T+ + +R G ++L+ +L+ I RTSE ARLFGI F EVL+RGSQFRVESIM
Sbjct: 250 ASTRHRWRTLHYLGVRAEGSLQLLYELNIIQRTSEFARLFGILFNEVLTRGSQFRVESIM 309
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
+RL+ + + +SPS Q RAPE + LILEPES Y P++VLDFQSLYPS++IAYN
Sbjct: 310 VRLAHQRDQIMLSPSKVQVREQRAPEVVALILEPESVFYESPVVVLDFQSLYPSMMIAYN 369
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGI 652
C+STCLG+V + F FG DL + L +L Q + I P+G FV +R G+
Sbjct: 370 MCYSTCLGKVSSESPGEPFKFGVSDLQLPPGLLSRLVAQDLVHICPNGTMFVKSEVRHGV 429
Query: 653 LPKMLQEILDTRLMVKQSM 671
LP ML EIL TR+MVK++M
Sbjct: 430 LPVMLDEILRTRVMVKKAM 448
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 154
Y P++VLDFQSLYPS++IAYN C+STCLG+V + F FG
Sbjct: 347 FYESPVVVLDFQSLYPSMMIAYNMCYSTCLGKVSSESPGEPFKFG 391
>gi|281208977|gb|EFA83152.1| DNA polymerase zeta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 2058
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 260/444 (58%), Gaps = 52/444 (11%)
Query: 242 NYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEV 301
N +LT+L+VE+H +R L PDP D +KAI +Y C R G I ES+
Sbjct: 1300 NQFLTLLSVELHINTRGDLNPDPEIDGIKAI---IYCC-----RDEGAI----ESQ---- 1343
Query: 302 RTKPIQMNFVSNEKELFSTF-IENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
N K+LF I+ +Q D +I +G + +NE +L
Sbjct: 1344 ---------TENYKDLFGILMIDPAKQPD-------QINNNRFGLECTVNCYTNEYQLLK 1387
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKN 420
F E VR +D DI +GYEI+ LS GY++ER L EL R +
Sbjct: 1388 AFCELVRSFDVDIFVGYEIQMLSLGYMIERARHL------ELDRFGYDH----------S 1431
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ +Q+ GRIVIN+WRLLRHE+ + YT++NI +H L RIP +S K LT W+ +
Sbjct: 1432 SGIQIIGRIVINIWRLLRHEITIDIYTYQNICFHRLKRRIPEYSPKTLTDWY--NSGCQT 1489
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
W T+ YL G L+ D IGRTSE+AR++GI F+ VLSRGSQFRVES++LRL++
Sbjct: 1490 WRTLSFYLEHCKGNFDLLYSFDIIGRTSELARVYGIDFFSVLSRGSQFRVESMLLRLTKP 1549
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
N++ SPS Q + PES+PL+++P S+++ P++VLDFQSLYPS++IAYNYC+STC
Sbjct: 1550 ENYIMYSPSRDQTTNQPMPESIPLVMDPISKMFNSPVVVLDFQSLYPSIMIAYNYCYSTC 1609
Query: 601 LGRVEHLG-VSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
LGRV VS G +N+ L+ L N+++SP+ V + + R G+ PK+L E
Sbjct: 1610 LGRVIPTDPVSHDKNLGSGKINIKPGLLRLLGDNVSVSPNEVMYTNTQTRKGLFPKLLTE 1669
Query: 660 ILDTRLMVKQSMKEYKFSESLRNL 683
+L+TR+M+K++MK+Y+ ++ + N+
Sbjct: 1670 VLETRIMIKKAMKKYRDNKKIYNM 1693
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 32/34 (94%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
+++ P++VLDFQSLYPS++IAYNYC+STCLGRV
Sbjct: 1580 KMFNSPVVVLDFQSLYPSIMIAYNYCYSTCLGRV 1613
>gi|328866324|gb|EGG14709.1| DNA polymerase zeta catalytic subunit [Dictyostelium fasciculatum]
Length = 2115
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 269/479 (56%), Gaps = 73/479 (15%)
Query: 242 NYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRK------VGIILIGQE 295
N +LT+L+VEIH ++ L P+P D V AI Y + E++ G+++I
Sbjct: 1233 NQFLTLLSVEIHVNTKGTLNPNPETDPVLAIAYVIRDEGASEEQGDDYKDVTGLLVIAAS 1292
Query: 296 SELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
S + +G I F +E
Sbjct: 1293 SNTSTMG-------------------------------LGCPIRVFQ-----------DE 1310
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR-ITEVEKRNS- 413
+EL F+ VR +D DIL+G+E++ S GYL+ER +G++L E+SR I+ ++ + S
Sbjct: 1311 RELLKAFVALVRSFDVDILVGFEVQYASIGYLIERARWIGISLCDEVSRLISHIQGKESL 1370
Query: 414 ---------SRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
RD ++ +Q+ GRIV+N+WRLLRHE+ L +Y+FEN+ ++ LH+R P
Sbjct: 1371 NKSNNFFVRERDRFGYDHSSGIQIVGRIVLNMWRLLRHEITLDNYSFENVCFYALHQRYP 1430
Query: 462 LHSWKLLTCWWEHRTHL------YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
+S ++LT W+ + +W T+ H L R G + LI+ D IGR+SE AR++G
Sbjct: 1431 HYSHQVLTDWYGDPKSIETIPPPLRWKTLRHTLDRAMGSLDLIQHFDIIGRSSEFARVYG 1490
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
I F+ VLSRGSQ+RVES++LRL++ N++ SPS +Q + PE +PL+++P +RLY
Sbjct: 1491 IDFFSVLSRGSQYRVESMLLRLTKPENYILYSPSREQTTNQPMPECIPLVMDPATRLYDS 1550
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS---FPFGCIDLNVSIRSLKKLQQ 632
P+ VLDFQSLYPS++I +NYC+STCLG+V+ +D+ G I + +
Sbjct: 1551 PVAVLDFQSLYPSIMIGHNYCYSTCLGKVQPTSDTDNTKRLGSGSIKIQNGLVEALHANN 1610
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
+ +SP+GV FV R GI PK+L E+LDTR+MVK++MK++K ++ R ML+S L
Sbjct: 1611 AINVSPNGVMFVKSDTRRGIFPKLLSEVLDTRIMVKKAMKKHK--DNKRIYKMLDSRQL 1667
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
RLY P+ VLDFQSLYPS++I +NYC+STCLG+V+ +D+
Sbjct: 1546 RLYDSPVAVLDFQSLYPSIMIGHNYCYSTCLGKVQPTSDTDN 1587
>gi|320168960|gb|EFW45859.1| DNA polymerase zeta catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 2719
Score = 306 bits (784), Expect = 3e-80, Method: Composition-based stats.
Identities = 187/524 (35%), Positives = 284/524 (54%), Gaps = 111/524 (21%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEE--DRKV-GIILIGQESELPE 300
++T+L++E+H +R +PDP +D V AI Y L R + G+I++ LP
Sbjct: 1401 HVTILSLEVHVNTRGDFRPDPEHDRVAAIVYLLRHDAVHHVGGRDIQGVIMVA--PSLPT 1458
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
T M +D G ++ FS V++E LF
Sbjct: 1459 ATTTTTTM-------------------YDRASTAGSPLQ-FSGLTGCRVTSVADETALFM 1498
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR-----ITEVE------ 409
FI+ V +DPD L+GYE++ LS GYL++R L L+L L+R +TE E
Sbjct: 1499 SFIDLVAHFDPDFLVGYELQMLSLGYLVDRARRLQLDLCARLARCPTVPVTESESGSTSA 1558
Query: 410 ----------KRNSSRDEVK--------------------------------------NT 421
KR++ D+ + ++
Sbjct: 1559 AAAAAPPNVWKRSNVTDKQQQQQHQQPQQQQPQQQHPPPDQSTRGDAADAAEAYNYSHSS 1618
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRT----- 476
LQ+ GR+V+N+WRL+R E+ L Y+FEN++YH+LH+RIP ++++ L+ WW ++
Sbjct: 1619 GLQIGGRVVLNVWRLMRSEIALNIYSFENVVYHILHQRIPKYTFRTLSDWWLGQSLVRKG 1678
Query: 477 -----------------HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
+L +W TV++ L + I L+++ DFIGRTSE+ R+FGI F
Sbjct: 1679 VASDLAFQRSPFAGTSSNLSRWRTVQYLLTKARLCIDLLDETDFIGRTSELGRIFGILFE 1738
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
V++RGSQFRVES+MLRL++ NF+ +SPS +Q A MRAPE +PLILEPESR YT P++V
Sbjct: 1739 SVITRGSQFRVESMMLRLAKPMNFIPISPSKQQVAQMRAPECVPLILEPESRFYTSPVLV 1798
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDFQSLYPSV+IAYN C+STCLGR+ G+ +F + + S+ + + + T++P+
Sbjct: 1799 LDFQSLYPSVMIAYNICYSTCLGRMSR-GLERAFGISTLQVPKSLSA--SIADSATLTPN 1855
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
V FV K++R G+LP++L EIL R+MVK +MK + + +R L
Sbjct: 1856 SVIFVKKTVRVGVLPRLLDEILRARVMVKDAMK--RLDKKIRQL 1897
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
R YT P++VLDFQSLYPSV+IAYN C+STCLGR+ G+ +F
Sbjct: 1790 RFYTSPVLVLDFQSLYPSVMIAYNICYSTCLGRMSR-GLERAF 1831
>gi|403161840|ref|XP_003322150.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171949|gb|EFP77731.2| hypothetical protein PGTG_03687 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1748
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 269/464 (57%), Gaps = 49/464 (10%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIG 293
E+ ++ VLA+E++A S +PDPA D++K +FY L T + +VGII++
Sbjct: 864 ESQHMDVLAIEVYADSTNDRRPDPASDQIKVLFYCLKTERAGIELNRTDSGTRVGIIMVD 923
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
+ Q N ++L L Y ++ V
Sbjct: 924 EH-----------QGNTPRTAEQLR--------------LPKYALDQCCI------EVVD 952
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-EVEKRN 412
E EL + I+ VR WDP++L G+E+E+ SWGY++ RG L +L EL R+ E R
Sbjct: 953 TEVELLNSLIDKVRHWDPEVLTGFELESWSWGYVMRRGCELDFDLVYELGRVRFESHGRF 1012
Query: 413 SSRDE----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ +D+ + +++ GR V+++WR++R E+ L YTFEN++YHVL R P +S+ L
Sbjct: 1013 AGKDDKWGYTHGSSIKITGRHVLSIWRIIRSELALTQYTFENVVYHVLRTRTPHYSFSTL 1072
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
WW+ T ++ + +Y+ RV I L+E+ + I R +E++R G+ F+ +SRGSQF
Sbjct: 1073 AKWWKDGTVEHRRRVLMYYIARVELDINLVEETEIISRNAEISRTLGVDFFSAISRGSQF 1132
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VES++ R+S+ N+V SPS ++ A A E +PL++EP+S Y P++VLDFQSLYPS
Sbjct: 1133 KVESVVFRISKPENYVLPSPSREEVAKQNAAECIPLVMEPQSAFYKSPLLVLDFQSLYPS 1192
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
++IAYNYC+STCLGRV + +DL + LK ++ ++ +SP+G+ FV +
Sbjct: 1193 IMIAYNYCYSTCLGRVSSFKGVNKLGTSILDLPDGL--LKLMKDDIIVSPNGLMFVKHHV 1250
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLT-MLNSMLL 691
R +L KML E LDTR+M+KQSM KF++S + LT MLN+ L
Sbjct: 1251 RKSLLSKMLSEFLDTRVMIKQSM---KFTKSDKALTKMLNARQL 1291
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+R+ + +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1135 ESVVFRISKPENYVLPSPSREEVAKQNAAECIPLVMEPQSA----FYKSPLLVLDFQSLY 1190
Query: 125 PSVIIAYNYCFSTCLGRV 142
PS++IAYNYC+STCLGRV
Sbjct: 1191 PSIMIAYNYCYSTCLGRV 1208
>gi|393908164|gb|EJD74935.1| DNA polymerase [Loa loa]
Length = 1248
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/465 (38%), Positives = 263/465 (56%), Gaps = 61/465 (13%)
Query: 243 YYLTVLAVEIHAIS-RALLKPDPAYDEVKAIFYY--LYTCPPEEDRKVGIILIGQESELP 299
++L V+++EI A+S R + PDP YD++ IFY + C +E V IL+ +
Sbjct: 453 HHLCVMSMEILALSSRGMPVPDPQYDQILGIFYTISMNVCVQDEINDVDGILLNMD---- 508
Query: 300 EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
N + + +L++ FVS+E +LF
Sbjct: 509 ---------NGLIGQNDLYT-------------------------------FVSSEVDLF 528
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDE-- 417
F+ VR++DPDI+IGY + SWGYL ER ++G NL E+SR+ VE + R
Sbjct: 529 DAFVNVVRRYDPDIVIGYNTQRYSWGYLTERSLIIGRNLLSEISRVP-VEISDYYRPGLQ 587
Query: 418 -----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
VK GRI+IN+WR+LRHE+ L++YT N++ +VL R P +S++ L W
Sbjct: 588 KKSRWVKELDPTPRGRILINVWRILRHEIALRNYTLSNVVNNVLKRRFPHYSFQTLLDWI 647
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
+ ++H + + ++ +LDF +TSEMARL+GIQF EVL+RGSQFRVES
Sbjct: 648 LSGERDLIILVLKHMKLYCQLNLSILLRLDFFTKTSEMARLYGIQFNEVLTRGSQFRVES 707
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
++LRL+R +VA S S QR M +PE+LPL +EPES Y DP+IVLDFQSLYPS+IIA
Sbjct: 708 MLLRLARQEKYVAPSISPAQRGAMCSPETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIA 767
Query: 593 YNYCFSTCLGRVEHL----GVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDK 646
YNYCF+TCLG++ H+ + FG + N I + + L +SP+G F +
Sbjct: 768 YNYCFTTCLGKISHVENICSPNRLIEFGGLQYNCPIDDIVSMLTANKLHVSPTGAIFCQR 827
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
++R G++P ML+EIL+TR+MVK++ KE K L + M L
Sbjct: 828 TVRRGLMPVMLEEILNTRVMVKKAAKECKKDRRLARILEARQMAL 872
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYNYCF+TCLG++ H+
Sbjct: 747 FYRDPVIVLDFQSLYPSIIIAYNYCFTTCLGKISHV 782
>gi|392576217|gb|EIW69348.1| hypothetical protein TREMEDRAFT_30704 [Tremella mesenterica DSM 1558]
Length = 1864
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 257/466 (55%), Gaps = 56/466 (12%)
Query: 238 SHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESE 297
S E ++VLA+E+ A SR L PDP D + AIF+ C ED +
Sbjct: 1037 SERERQNMSVLALEVFATSRHQLLPDPEKDPLTAIFF----CYQNEDESL---------- 1082
Query: 298 LPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEI--------ETFSWGYLLER 349
P +F P GY + E +
Sbjct: 1083 -------PDNTSF-------------------PGYYAGYAVVDSPQSRPERMRLDDEIPH 1116
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI--T 406
H V +E +L + I+ V+ WDPD+L G+E+ SWGYL R + L+L +LSR+
Sbjct: 1117 HLVDSELDLINWVIDLVKDWDPDVLAGWELHNGSWGYLAARAEHGFSLDLTDQLSRVITG 1176
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ + + ++ GR ++N+WR+ R E+NL YTFEN+ +H+LH+R+P +S
Sbjct: 1177 HTGPKKDFYSATQTSTFKVSGRHILNIWRICRSELNLTQYTFENVAFHLLHQRVPHYSAA 1236
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
LT W+ + + +++ L RV + +++ + I + +E AR+FG+ F V+ RGS
Sbjct: 1237 NLTALWKSKMPSHTLRVIKYLLQRVVMYMEMVDAAEIITKNAEFARVFGVDFASVMFRGS 1296
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q++VES M R+++ +FV VSPS +Q AP ++PLI EPES+ YT PI+VLDFQSLY
Sbjct: 1297 QYKVESFMFRIAKPESFVLVSPSKQQVGLQNAPFAVPLIAEPESQFYTHPILVLDFQSLY 1356
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT-ISPSGVAFVD 645
PSV+IAYN CFSTCLGRVE +D FG +L V L+ L+ LT ++P+G+ FV
Sbjct: 1357 PSVMIAYNICFSTCLGRVEKFRGTDK--FGFTELKVDDGVLELLKDYLTAVTPNGMIFVK 1414
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
++R +L KML EILDTR+MVKQ+MK + +SL L +LN+ L
Sbjct: 1415 PAVRKSLLSKMLGEILDTRVMVKQAMKGARGDKSL--LQLLNARQL 1458
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ YT PI+VLDFQSLYPSV+IAYN CFSTCLGRVE +D F F
Sbjct: 1341 QFYTHPILVLDFQSLYPSVMIAYNICFSTCLGRVEKFRGTDKFGF 1385
>gi|452837061|gb|EME39004.1| hypothetical protein DOTSEDRAFT_75635 [Dothistroma septosporum NZE10]
Length = 1701
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 254/449 (56%), Gaps = 43/449 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++ +++E+H +R L PDP DEV + + + + RK+GI+L+ ++ +
Sbjct: 847 ETGYMSTMSLEVHVNNRGDLAPDPERDEVNLVVWIIADEQMDNSRKLGIVLLNKDDD--- 903
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
++ +R ++G ++E S NE +L +
Sbjct: 904 ------------------EEIVDRIRH-----IVGADVEIVS---------EDNELDLLN 931
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDE-- 417
++ VR +DPDIL GYE+ SWGYL+ER V NL E SR+ +D
Sbjct: 932 RMVDIVRTYDPDILTGYEVHNNSWGYLIERARLVYEYNLPDEFSRMKSQSHGRFGKDADR 991
Query: 418 ---VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ +++ GR IN+WR +R E+NL YT EN+++H+LH+R+P +S++ LT W++
Sbjct: 992 WGFTHTSTVRITGRHTINIWRAMRSELNLLQYTMENVVFHLLHKRVPHYSFQTLTSWYQS 1051
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ +++ + R +++ + I RTSE ARL G+ F+ V SRGSQF+VES+M
Sbjct: 1052 KKPRDLVKVLDYLITRTKLDFDILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLM 1111
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ +FV VSPS KQ A E LPL++EP+S Y P++VLDFQSLYPSV+IAYN
Sbjct: 1112 FRIAKPESFVLVSPSRKQVGAQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYN 1171
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGR+ ++ F D + L+ ++ L I+P+G+ +V +R +L
Sbjct: 1172 YCYSTCLGRITEWRGTNKMGFA--DFKRAPGLLELVKDKLNIAPNGMMYVKPEMRKSLLA 1229
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K ++L+ L
Sbjct: 1230 KMLGEILETRVMVKSGMKVDKDDKTLQQL 1258
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y P++VLDFQSLYPSV+IAYNYC+STCLG
Sbjct: 1124 SPSRKQVGAQNALECLPLVMEPQSA----FYNSPLLVLDFQSLYPSVMIAYNYCYSTCLG 1179
Query: 141 RV 142
R+
Sbjct: 1180 RI 1181
>gi|310794043|gb|EFQ29504.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1722
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 266/492 (54%), Gaps = 43/492 (8%)
Query: 199 RKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRA 258
RK + TP+ ID TP ++ + H E Y++ +A+EIH +R
Sbjct: 836 RKIMSTPQATRRYLSQIDGPTPKNRHAFKYPPKGKSTGVKH-EAQYMSTMALEIHVNTRG 894
Query: 259 LLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELF 318
L P+P DEV+ IF+ + V++ +E
Sbjct: 895 KLVPNPDEDEVQCIFWSIKAD-----------------------------GTVNSSQEAA 925
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
S + V PD + +I ++ ++E S+E +L +E VR+ DPDIL GYE
Sbjct: 926 SGILAGVVVLSPDGGLAAKIRRYTPAEVVEE---SSELDLMVRMVEIVRRHDPDILTGYE 982
Query: 379 IETLSWGYLLERGYV-LGLNLNQELSRIT-----EVEKRNSSRDEVKNTQLQMPGRIVIN 432
+ SWGYL+ER V +L E SR + K N + +++ GR +IN
Sbjct: 983 VHGSSWGYLIERARVKYDYDLCDEFSRTKSNSHGRIGKENDRWGFNTTSTIRVTGRHMIN 1042
Query: 433 LWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVT 492
+WR +R E+NL YT EN+++HVLH R+P +SWK LT W+ + +YL R
Sbjct: 1043 IWRCMRGELNLLQYTMENVVWHVLHRRMPHYSWKTLTEWYNSSKQRDLDKLLRYYLGRTK 1102
Query: 493 GIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ 552
I+++E + I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ
Sbjct: 1103 TDIQILESNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQ 1162
Query: 553 RAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR-VEHLGVSD 611
A E LPL++EP+S Y P++VLDFQSLYPSV+IAYN C+ST LGR V G++
Sbjct: 1163 VGGQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVNWRGMNK 1222
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G + R L+ L+ ++ I+P+G+ FV IR +L KML EIL+TR+MVK M
Sbjct: 1223 ---MGFTEYQRHRRLLELLKDHINITPNGMMFVRPEIRKSLLAKMLGEILETRVMVKSGM 1279
Query: 672 KEYKFSESLRNL 683
K+ K ++L+ L
Sbjct: 1280 KQDKDDKTLQQL 1291
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S Y P++VLDFQSLY
Sbjct: 1141 ESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSD----FYNSPLLVLDFQSLY 1196
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYN C+ST LGR+
Sbjct: 1197 PSVMIAYNLCYSTFLGRI 1214
>gi|328862001|gb|EGG11103.1| hypothetical protein MELLADRAFT_33498 [Melampsora larici-populina
98AG31]
Length = 1618
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 265/463 (57%), Gaps = 54/463 (11%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRK-------VGIILIG 293
E+ + VLAVE+HA +RA L+PDPA D ++ +FY L + E VG+I++
Sbjct: 720 ESQQMDVLAVEVHAKNRADLRPDPAQDPIEVVFYCLQSSRRVERGNGRRPGTYVGMIVVK 779
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
+ + ++ + N D LI V
Sbjct: 780 GGNHGGQ------KVKYALN-----------------DCLI---------------EVVD 801
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-EVEKRN 412
E EL ++ I+ VR WDP++L G+E+E+ SWGY++ RG L ++ E R+ E R
Sbjct: 802 TEIELMNLLIDKVRDWDPEVLTGFELESWSWGYVMGRGRELDFDVVHEFGRVKHESHGRF 861
Query: 413 SSRDE----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ +D+ + +++ GR V+++WR++R E+ + YTFEN+++H+L +R+P +S+ L
Sbjct: 862 AGKDDKWGYTHGSSIRVSGRHVLSIWRIIRSELAVTQYTFENLVFHILRKRLPHYSFATL 921
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
WW + + + +Y+ RV I L+++ + I R +E++R+ G+ F+ +SRGSQF
Sbjct: 922 GKWWRSGSIERQRRVLLYYMDRVELDIHLMDETEIISRNAEISRVLGVDFFSAISRGSQF 981
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VES++ R+++ N++ SPS ++ A E +PLI+EP+S Y P+IVLDFQSLYPS
Sbjct: 982 KVESVLFRIAKPENYLLPSPSREEVGQQNAAECIPLIMEPQSAFYKSPLIVLDFQSLYPS 1041
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
++IAYNYC+STCLGRV + F +DL + SL L+ +L +SP+G+ FV +
Sbjct: 1042 IMIAYNYCYSTCLGRVGTFKGTSKFGTSALDLPDGLLSL--LKDHLIVSPNGLMFVKPQV 1099
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
R +L KML E LDTR+M+K+SMK K + + M+N+ L
Sbjct: 1100 RKSLLSKMLSEFLDTRVMIKESMKAVKDDKGM--CKMMNARQL 1140
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDSD---MFPSSSSRDRLYTDPIIVLDFQSLY 124
ES L R KP++ PSP+R+ +++ + M P S+ Y P+IVLDFQSLY
Sbjct: 984 ESVLFRIAKPENYLLPSPSREEVGQQNAAECIPLIMEPQSA----FYKSPLIVLDFQSLY 1039
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSF 151
PS++IAYNYC+STCLGRV + F
Sbjct: 1040 PSIMIAYNYCYSTCLGRVGTFKGTSKF 1066
>gi|297841441|ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
gi|297334443|gb|EFH64861.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata]
Length = 1899
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 268/486 (55%), Gaps = 81/486 (16%)
Query: 227 QMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRK 286
QMG + S LTVL++E+HA SR L+PDP +D V I
Sbjct: 1027 QMGF---RDPASMGAGQQLTVLSIEVHAESRGDLRPDPRFDSVNVI-------------- 1069
Query: 287 VGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFI--ENVRQWDPDILIGYEIETFSWG 344
L+ Q + +FV+ E+F + +++ Q + D L G + F
Sbjct: 1070 ---ALVVQNDD-----------SFVA---EVFVLLVSPDSIDQRNVDGLSGCKFSVF--- 1109
Query: 345 YLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR 404
LE E++LFS FIE + +WDPDIL+G++I+ S G+L ER LG+ +SR
Sbjct: 1110 --LE------ERQLFSYFIETLCKWDPDILLGWDIQGGSIGFLAERAAQLGIRFLNNISR 1161
Query: 405 ITEVEKRNSSRDEVKNTQLQMP------------------------------GRIVINLW 434
RN S ++ K + +P GRIV+N W
Sbjct: 1162 TPSPTTRNDSDNKRKLGKNLLPDPLVADPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAW 1221
Query: 435 RLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI 494
RL+R EV L YT E + VL ++IP +K+LT W+ ++ +E+ + R
Sbjct: 1222 RLIRGEVKLNMYTIEAVSEAVLRQKIPSIPYKVLTEWFSSGPAGARYRCIEYVVRRTNLN 1281
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
+ ++ QLD I RTSE+AR+FGI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A
Sbjct: 1282 LEIMSQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVA 1341
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
A E +PL++EPES Y DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL ++
Sbjct: 1342 SQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNT--- 1398
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
G ++ + L+ L Q L +P+ V +V +R GILP++L+EIL TR+MVK++MK+
Sbjct: 1399 LGVSSYSLDLGVLQDLNQILQ-TPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKL 1457
Query: 675 KFSESL 680
SE++
Sbjct: 1458 TPSEAV 1463
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL
Sbjct: 1359 FYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHL 1394
>gi|389646163|ref|XP_003720713.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351638105|gb|EHA45970.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440468549|gb|ELQ37705.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae Y34]
gi|440481173|gb|ELQ61787.1| DNA polymerase zeta catalytic subunit [Magnaporthe oryzae P131]
Length = 1782
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 262/475 (55%), Gaps = 40/475 (8%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
I+ TP ++ H E Y++ +++EIH +R L PDP DEVK IF+
Sbjct: 837 IEGATPKNKHGFRYSQKQKTTSVQH-EVAYMSTMSIEIHVNTRGKLVPDPEKDEVKCIFW 895
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
C +D+ +E +Q V +E T E ++
Sbjct: 896 ----CVRSDDKS---------NEASSQAPDGLQSGVVVLSEE--GTLAERIK-------- 932
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL 394
++I+ G LLE ++E +L +E VR DPDIL GYE+ SWGYL+ER +
Sbjct: 933 -HQIK----GELLEE---TSELDLMVRMVEIVRTHDPDILTGYEVHGGSWGYLIERARCM 984
Query: 395 -GLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
NL E SR+ +D + + +++ GR +IN+WR +R E+NL YT
Sbjct: 985 YDYNLCDEFSRMKSQSHGRYGKDADRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYTM 1044
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
EN+++H+LH RIP +SW+ LT W+ H + +Y R I ++E+ I RTS
Sbjct: 1045 ENVVWHLLHRRIPHYSWQTLTTWYGSGRHGDLDKLLRYYQTRTRLDIEILEENGLISRTS 1104
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP
Sbjct: 1105 EQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEP 1164
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+S Y P++VLDFQSLYPSV+IAYNYC+ST LGR+ ++ F + R L+
Sbjct: 1165 QSAFYNSPVLVLDFQSLYPSVMIAYNYCYSTFLGRIVDWRGTNKMGFA--EYRRRKRLLE 1222
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
LQ+++ I+P+GV + IR +L KML EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1223 LLQEHINIAPNGVMYTKPEIRKSLLAKMLTEILETRVMVKSGMKQDKDDKTLQQL 1277
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1127 ESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPVLVLDFQSLY 1182
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1183 PSVMIAYNYCYSTFLGRI 1200
>gi|330926967|ref|XP_003301686.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
gi|311323405|gb|EFQ90238.1| hypothetical protein PTT_13248 [Pyrenophora teres f. teres 0-1]
Length = 1692
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 258/451 (57%), Gaps = 55/451 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEE----DRKVGIILIGQESELP 299
Y++++++E+H SR L PDPA DE++ IF+ + EE DR IL E E
Sbjct: 830 YMSIMSLEVHVNSRGSLVPDPAEDEIQCIFWSVQG---EENATTDRPHTGILCFSEEEGI 886
Query: 300 EVR-TKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKEL 358
VR K ++++ E EL +L
Sbjct: 887 AVRIAKQVRVDVEYEEDEL---------------------------------------DL 907
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDE 417
+ ++ VRQ+DPDIL GYE+ SWGYL+ER + NL +E+SR+ + +D
Sbjct: 908 INRLVDIVRQFDPDILTGYEVHNGSWGYLIERARMKYEYNLCEEISRVRSLSPGRLGKDV 967
Query: 418 -----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + + LT W+
Sbjct: 968 DRWGFTHTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHYQYSDLTTWY 1027
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
+ V+++ RV + ++E D + RTSE ARL G+ F+ V+SRGSQF+VES
Sbjct: 1028 TNGRPRDLTKVVDYFTTRVQLNLEILEANDVVPRTSEQARLLGVDFFAVISRGSQFKVES 1087
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
M R+++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSLYPSV+IA
Sbjct: 1088 TMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIA 1147
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
YNYC+STCLGR+ + + G +D + L+ ++ ++ I+P+G+ +V +R +
Sbjct: 1148 YNYCYSTCLGRIVNWRGRNK--MGFMDFKREPQLLELVKDHINIAPNGMMYVKPEMRKSL 1205
Query: 653 LPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L KML EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1206 LAKMLGEILETRVMVKSGMKQDKDDKTLQQL 1236
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES++ R KP++ SP+RK +++ + M P S+ YT P++VLDFQSLY
Sbjct: 1086 ESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSA----FYTSPVLVLDFQSLY 1141
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGR+
Sbjct: 1142 PSVMIAYNYCYSTCLGRI 1159
>gi|86196720|gb|EAQ71358.1| hypothetical protein MGCH7_ch7g765 [Magnaporthe oryzae 70-15]
Length = 1736
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 262/475 (55%), Gaps = 40/475 (8%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
I+ TP ++ H E Y++ +++EIH +R L PDP DEVK IF+
Sbjct: 837 IEGATPKNKHGFRYSQKQKTTSVQH-EVAYMSTMSIEIHVNTRGKLVPDPEKDEVKCIFW 895
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
C +D+ +E +Q V +E T E ++
Sbjct: 896 ----CVRSDDKS---------NEASSQAPDGLQSGVVVLSEE--GTLAERIK-------- 932
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL 394
++I+ G LLE ++E +L +E VR DPDIL GYE+ SWGYL+ER +
Sbjct: 933 -HQIK----GELLEE---TSELDLMVRMVEIVRTHDPDILTGYEVHGGSWGYLIERARCM 984
Query: 395 -GLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
NL E SR+ +D + + +++ GR +IN+WR +R E+NL YT
Sbjct: 985 YDYNLCDEFSRMKSQSHGRYGKDADRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYTM 1044
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
EN+++H+LH RIP +SW+ LT W+ H + +Y R I ++E+ I RTS
Sbjct: 1045 ENVVWHLLHRRIPHYSWQTLTTWYGSGRHGDLDKLLRYYQTRTRLDIEILEENGLISRTS 1104
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP
Sbjct: 1105 EQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEP 1164
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+S Y P++VLDFQSLYPSV+IAYNYC+ST LGR+ ++ F + R L+
Sbjct: 1165 QSAFYNSPVLVLDFQSLYPSVMIAYNYCYSTFLGRIVDWRGTNKMGFA--EYRRRKRLLE 1222
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
LQ+++ I+P+GV + IR +L KML EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1223 LLQEHINIAPNGVMYTKPEIRKSLLAKMLTEILETRVMVKSGMKQDKDDKTLQQL 1277
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1127 ESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPVLVLDFQSLY 1182
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1183 PSVMIAYNYCYSTFLGRI 1200
>gi|367041926|ref|XP_003651343.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
gi|346998605|gb|AEO65007.1| hypothetical protein THITE_2111493 [Thielavia terrestris NRRL 8126]
Length = 1752
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/483 (36%), Positives = 262/483 (54%), Gaps = 57/483 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
I TP T ++ + H E Y++ +++EIH +R L P+P DEV+ IF+
Sbjct: 848 IAGPTPKNTHGFKYSQKQKSTSVQH-EAQYMSTMSLEIHVNTRGKLVPNPEEDEVQCIFW 906
Query: 275 YL-------YTCPPEEDRKVGIILIGQE-SELPEVRTKPIQMNFVSNEKELFSTFIENVR 326
L Y +D G+I++ ++ S ++R++ T +E V
Sbjct: 907 CLRSDEMCLYGSQSTDDTISGVIVLSEDGSRARQIRSQ---------------TSVEVVE 951
Query: 327 QWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGY 386
+ ++E +L + ++ VR DPDIL GYE+ SWGY
Sbjct: 952 E-------------------------TSELDLMTKMVDIVRAHDPDILTGYEVHGSSWGY 986
Query: 387 LLERG-YVLGLNLNQELSRITEVEKRNSSRDE-----VKNTQLQMPGRIVINLWRLLRHE 440
L+ER + +L E SR+ S R+ K + L + GR VIN+WR +R E
Sbjct: 987 LIERAMHKYDYDLCNEFSRMKSASFGRSGREADRWGFQKTSMLHVTGRHVINVWRAMRGE 1046
Query: 441 VNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQ 500
+NL Y+ EN+++H+LH RIP +SW+ LT W+ + +YL R I ++E
Sbjct: 1047 LNLLQYSMENVVWHLLHRRIPHYSWRTLTDWYLSGRPGDLSKVLRYYLRRTRLDIEILEA 1106
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+ I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ +SPS KQ A E
Sbjct: 1107 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSRKQVGAQNALE 1166
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
LPL++EP+S YT P++VLDFQSLYPSV+IAYNYC+STCLGR+ ++ F
Sbjct: 1167 CLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAYNYCYSTCLGRIVSWRGTNKLGFTEYKR 1226
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+ L+ L+ + I+P+G+ + IR +L KML EIL+TR+MVK MKE K ++L
Sbjct: 1227 REGL--LRLLKDYINIAPNGIMYTKPEIRKSLLAKMLTEILETRVMVKSGMKEDKDDKTL 1284
Query: 681 RNL 683
+ L
Sbjct: 1285 QKL 1287
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ YT P++VLDFQSLYPSV+IAYNYC+STCLG
Sbjct: 1153 SPSRKQVGAQNALECLPLVMEPQSA----FYTSPVLVLDFQSLYPSVMIAYNYCYSTCLG 1208
Query: 141 RV 142
R+
Sbjct: 1209 RI 1210
>gi|12324676|gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 264/466 (56%), Gaps = 74/466 (15%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L++E+HA SR L+PDP +D V I +++ +S + EV
Sbjct: 1037 LTILSIEVHAESRGDLRPDPRFDSVNVI---------------ALVVQNDDSFVAEV--- 1078
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
FV LFS +++ Q + D L G ++ F LE E++LF FIE
Sbjct: 1079 -----FVL----LFSP--DSIDQRNVDGLSGCKLSVF-----LE------ERQLFRYFIE 1116
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK--NTQ 422
+ +WDPD+L+G++I+ S G+L ER LG+ +SR N+S ++ K N
Sbjct: 1117 TLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL 1176
Query: 423 LQMP----------------------------GRIVINLWRLLRHEVNLQSYTFENIMYH 454
L P GRIV+N WRL+R EV L YT E +
Sbjct: 1177 LPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEA 1236
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
VL +++P +K+LT W+ ++ +E+ + R + ++ QLD I RTSE+AR+F
Sbjct: 1237 VLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVF 1296
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
GI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E +PL++EPES Y
Sbjct: 1297 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYD 1356
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL ++ G ++ + L+ L Q L
Sbjct: 1357 DPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNT---LGVSSYSLDLDVLQDLNQIL 1413
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+P+ V +V +R GILP++L+EIL TR+MVK++MK+ SE++
Sbjct: 1414 Q-TPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAV 1458
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL
Sbjct: 1354 FYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHL 1389
>gi|334183720|ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1916
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 264/466 (56%), Gaps = 74/466 (15%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L++E+HA SR L+PDP +D V I +++ +S + EV
Sbjct: 1059 LTILSIEVHAESRGDLRPDPRFDSVNVI---------------ALVVQNDDSFVAEV--- 1100
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
FV LFS +++ Q + D L G ++ F LE E++LF FIE
Sbjct: 1101 -----FVL----LFSP--DSIDQRNVDGLSGCKLSVF-----LE------ERQLFRYFIE 1138
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK--NTQ 422
+ +WDPD+L+G++I+ S G+L ER LG+ +SR N+S ++ K N
Sbjct: 1139 TLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL 1198
Query: 423 LQMP----------------------------GRIVINLWRLLRHEVNLQSYTFENIMYH 454
L P GRIV+N WRL+R EV L YT E +
Sbjct: 1199 LPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEA 1258
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
VL +++P +K+LT W+ ++ +E+ + R + ++ QLD I RTSE+AR+F
Sbjct: 1259 VLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVF 1318
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
GI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E +PL++EPES Y
Sbjct: 1319 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYD 1378
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL ++ G ++ + L+ L Q L
Sbjct: 1379 DPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNT---LGVSSYSLDLDVLQDLNQIL 1435
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+P+ V +V +R GILP++L+EIL TR+MVK++MK+ SE++
Sbjct: 1436 Q-TPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAV 1480
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL
Sbjct: 1376 FYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHL 1411
>gi|3176661|gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 264/466 (56%), Gaps = 74/466 (15%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L++E+HA SR L+PDP +D V I +++ +S + EV
Sbjct: 1037 LTILSIEVHAESRGDLRPDPRFDSVNVI---------------ALVVQNDDSFVAEV--- 1078
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
FV LFS +++ Q + D L G ++ F LE E++LF FIE
Sbjct: 1079 -----FVL----LFSP--DSIDQRNVDGLSGCKLSVF-----LE------ERQLFRYFIE 1116
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK--NTQ 422
+ +WDPD+L+G++I+ S G+L ER LG+ +SR N+S ++ K N
Sbjct: 1117 TLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL 1176
Query: 423 LQMP----------------------------GRIVINLWRLLRHEVNLQSYTFENIMYH 454
L P GRIV+N WRL+R EV L YT E +
Sbjct: 1177 LPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEA 1236
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
VL +++P +K+LT W+ ++ +E+ + R + ++ QLD I RTSE+AR+F
Sbjct: 1237 VLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVF 1296
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
GI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E +PL++EPES Y
Sbjct: 1297 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYD 1356
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL ++ G ++ + L+ L Q L
Sbjct: 1357 DPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNT---LGVSSYSLDLDVLQDLNQIL 1413
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+P+ V +V +R GILP++L+EIL TR+MVK++MK+ SE++
Sbjct: 1414 Q-TPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAV 1458
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL
Sbjct: 1354 FYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHL 1389
>gi|392597385|gb|EIW86707.1| hypothetical protein CONPUDRAFT_95484 [Coniophora puteana RWD-64-598
SS2]
Length = 1571
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 251/442 (56%), Gaps = 48/442 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+++L EI A+S P+ DE+ A F+ + + GIIL+ E
Sbjct: 728 MSILTFEIFALSVDDKFPNSTSDEIVAAFFTFLDHSTQATPRQGIILVRNE--------- 778
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+ +P L +EIE V +E +L + I+
Sbjct: 779 ----------------------RLNPSGLRDFEIE-----------IVMHELDLINAIID 805
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-TEVEKRNSSRDEVKNT-Q 422
V DPDI+ G+E++T SWGYL RG GL++ + +SR +RN R ++ T
Sbjct: 806 AVVDLDPDIIAGWEVQTSSWGYLCSRGNNYGLDVGEHISRAPGRFNQRNDDRWGIRTTTS 865
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWM 482
L++ GR V N+WRL+R E +L YTFEN+ H L +R+P ++ K+LT W+ L +
Sbjct: 866 LKIVGRHVFNVWRLMRAEHSLNMYTFENVSLHALEKRVPKYTPKVLTTWYLSE-DLSLFT 924
Query: 483 TVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
TV Y R ++L+ Q D I +TSE AR+FG+ F+ V+SRGSQF+VES M R+++
Sbjct: 925 TVLRYFAERTCMTLQLLAQADVITKTSEFARVFGVDFFSVISRGSQFKVESFMFRIAKPE 984
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
+FV +SPS + A E +PLI+EP S Y P+ VLDFQSLYPS++IAYNYC+STCL
Sbjct: 985 SFVLLSPSKQDVGRQNAAECMPLIMEPLSAFYNGPLAVLDFQSLYPSIMIAYNYCYSTCL 1044
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
GRV G G +LN+S L +L+ +L +SP+G+ +V +IR G+L +ML E+L
Sbjct: 1045 GRVS--GFQGKNKLGVSELNISPSLLNRLKDHLEVSPNGIVYVKPTIRKGLLGRMLTELL 1102
Query: 662 DTRLMVKQSMKEYKFSESLRNL 683
DTR+MVKQ+MK + +++LR +
Sbjct: 1103 DTRVMVKQAMKTAQGNKALRKI 1124
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV------EHLGVSD 149
Y P+ VLDFQSLYPS++IAYNYC+STCLGRV LGVS+
Sbjct: 1015 FYNGPLAVLDFQSLYPSIMIAYNYCYSTCLGRVSGFQGKNKLGVSE 1060
>gi|452986752|gb|EME86508.1| hypothetical protein MYCFIDRAFT_131051 [Pseudocercospora fijiensis
CIRAD86]
Length = 1594
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 252/449 (56%), Gaps = 43/449 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++ +++E+H +R L PDP DEV + + + +E +GI ++ QE + E
Sbjct: 740 ETGYMSTMSLEVHVNTRGDLVPDPERDEVNMVVWCIADDQMDEKTVLGIAVLAQEGD--E 797
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
R I+ N V N+ +L NE +L +
Sbjct: 798 DRLDQIRRN-VGNDTQLDCE--------------------------------DNELDLIN 824
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDE-- 417
++ VRQ+DPDIL G+E+ SWGYL+ER + NL E SR+ +D
Sbjct: 825 RMVDIVRQYDPDILTGFEVHNGSWGYLIERARLQYEFNLPDEFSRMKSKSHGRFGKDADR 884
Query: 418 ---VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ + + + GR IN+WR +R E+NL YT EN+++H+LH RIP +S+ LT W++
Sbjct: 885 WGFTQTSTVSITGRHTINIWRAMRSELNLLQYTMENVVFHLLHRRIPHYSFATLTRWYQS 944
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ +++ + R + +++ + I RTSE ARL G+ F+ V SRGSQF+VES+M
Sbjct: 945 KKPRDLTRLLDYLITRTRLDLEILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESLM 1004
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ +FV VSPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYN
Sbjct: 1005 FRIAKPESFVLVSPSRKQVGAQNALECLPLVMEPQSAFYSSPLVVLDFQSLYPSVMIAYN 1064
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGR+ + ++ F D + L+ +Q L ISP+G+ +V +R +L
Sbjct: 1065 YCYSTCLGRIVNWRGTNKLGFA--DFQRAPGLLELVQDRLNISPNGMMYVKPEMRKSLLA 1122
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K +L+ L
Sbjct: 1123 KMLGEILETRVMVKSGMKVDKDDRTLQQL 1151
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y+ P++VLDFQSLYPSV+IAYNYC+STCLG
Sbjct: 1017 SPSRKQVGAQNALECLPLVMEPQSA----FYSSPLVVLDFQSLYPSVMIAYNYCYSTCLG 1072
Query: 141 RV 142
R+
Sbjct: 1073 RI 1074
>gi|42563023|ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
Length = 1890
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 264/466 (56%), Gaps = 74/466 (15%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L++E+HA SR L+PDP +D V I +++ +S + EV
Sbjct: 1033 LTILSIEVHAESRGDLRPDPRFDSVNVI---------------ALVVQNDDSFVAEV--- 1074
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
FV LFS +++ Q + D L G ++ F LE E++LF FIE
Sbjct: 1075 -----FVL----LFSP--DSIDQRNVDGLSGCKLSVF-----LE------ERQLFRYFIE 1112
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK--NTQ 422
+ +WDPD+L+G++I+ S G+L ER LG+ +SR N+S ++ K N
Sbjct: 1113 TLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL 1172
Query: 423 LQMP----------------------------GRIVINLWRLLRHEVNLQSYTFENIMYH 454
L P GRIV+N WRL+R EV L YT E +
Sbjct: 1173 LPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEA 1232
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
VL +++P +K+LT W+ ++ +E+ + R + ++ QLD I RTSE+AR+F
Sbjct: 1233 VLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVF 1292
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
GI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E +PL++EPES Y
Sbjct: 1293 GIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYD 1352
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL ++ G ++ + L+ L Q L
Sbjct: 1353 DPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNT---LGVSSYSLDLDVLQDLNQIL 1409
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+P+ V +V +R GILP++L+EIL TR+MVK++MK+ SE++
Sbjct: 1410 Q-TPNSVMYVPPEVRRGILPRLLEEILSTRIMVKKAMKKLTPSEAV 1454
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYN CFSTCLG++ HL
Sbjct: 1350 FYDDPVIVLDFQSLYPSMIIAYNLCFSTCLGKLAHL 1385
>gi|290981126|ref|XP_002673282.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
gi|284086864|gb|EFC40538.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
Length = 1980
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 264/469 (56%), Gaps = 76/469 (16%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
L+V+ +E H ++RA P+P YD V+ I C + +L+ +E E + +
Sbjct: 1093 LSVMCIECHVLTRATFLPNPLYDSVQTIVITYQNCANIAESLEHWLLVNREMEADDAAQR 1152
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
P+ F T + V ++ NEK+L+ FI+
Sbjct: 1153 PLA----------FPTHFDRVIEF------------------------KNEKDLYEGFID 1178
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGY-VLGLNLNQELSRITEVEKRNSSRDEVKNTQ- 422
+ + DPDIL+GYEI+T GYL+ERG+ V+G N+ E+SR+ + D+ K T
Sbjct: 1179 VLCKVDPDILLGYEIQTEGLGYLIERGFLVMGRNVCFEISRVANFQSDKPKVDKKKATNT 1238
Query: 423 -----------------------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + GR+V+N+WR++ E+ L YT N++++VL R
Sbjct: 1239 SNNFQREKALKKAQEYARNKQSGVMIKGRVVMNVWRIMNGELKLDMYTLHNVVFNVLGRR 1298
Query: 460 IPLHSWKLLT-----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
IP +S + LT C E + Y+ + +++YLI+ + + ++ LD + RT E+ +++
Sbjct: 1299 IPFYSHQTLTDLSHSCSHEKDSFEYR-VILQYYLIKTSVTLEVLNHLDILNRTGELGKVY 1357
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
GI+F+ V+SRGSQ+RVES+MLRL+RL N+VA+SP+ KQ A E LPL++EP+S+LYT
Sbjct: 1358 GIEFFSVISRGSQYRVESMMLRLARLRNYVALSPTRKQVMEQAAIECLPLVMEPQSKLYT 1417
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
+P+IVLDFQSLYPS+IIAYN C+STCLG++ + + G ++ L+KL Q+
Sbjct: 1418 NPMIVLDFQSLYPSIIIAYNLCYSTCLGKLAFVDRKKT-KLGTLENYEPNNELRKLLQDR 1476
Query: 635 T----------ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
T I+P+ FV ++R G+LP+M EIL+TR+MVKQ+MKE
Sbjct: 1477 TGSDSIEEDIFITPNQCLFVKPNVRQGVLPRMCSEILNTRIMVKQAMKE 1525
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 15/107 (14%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SPTRK +++ + M P S +LYT+P+IVLDFQSLYPS+IIAYN C+STCLG
Sbjct: 1390 SPTRKQVMEQAAIECLPLVMEPQS----KLYTNPMIVLDFQSLYPSIIIAYNLCYSTCLG 1445
Query: 141 RVEHLGVSDSFPFGCIASRESN-------QSPPNKDSIHEAEITHPD 180
++ + + G + + E N Q DSI E P+
Sbjct: 1446 KLAFVDRKKT-KLGTLENYEPNNELRKLLQDRTGSDSIEEDIFITPN 1491
>gi|405118606|gb|AFR93380.1| atrophin-1 family protein [Cryptococcus neoformans var. grubii H99]
Length = 1997
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 255/439 (58%), Gaps = 39/439 (8%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+++L +E+ A SR L PDP D V AIFY C D + I P
Sbjct: 1150 MSILTMEVFAQSRGSLLPDPEKDAVTAIFY----CYSNTDDDLPDTTI-----YPGYHAG 1200
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+ + ++N L R D I +E+ V +E L + I+
Sbjct: 1201 YVVIGALANPARL--------RLDD----IPFEV-------------VEDELALINWVID 1235
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI--TEVEKRNSSRDEVKNT 421
V+ WDPD+L G+E+ SWGYL R +++ ++SR+ + RN ++
Sbjct: 1236 TVKFWDPDVLAGWELHNSSWGYLAARASGEFAMDMMDQISRVISGKTGPRNDGYSAHHSS 1295
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
++ GR +N+WR+ R E+NL YTFEN+++H+LH+RIP +S LT W+ ++ +
Sbjct: 1296 TFKVTGRHTLNIWRICRSEINLTQYTFENVVFHLLHQRIPHYSPASLTALWKSKSPSHAC 1355
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
++++ R + +++Q + I +T+E AR+FG+ F VL+RGSQ++VES + R+++
Sbjct: 1356 RVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESFIFRIAKPE 1415
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
+FV VSPS +Q AP ++PLI EPES+ YT P+IVLDFQSLYPS++IAYN C+STCL
Sbjct: 1416 SFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAYNICYSTCL 1475
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
GRVE ++ FG +L V+ L+ L+ LT++P+G+ FV +IR +L KML EIL
Sbjct: 1476 GRVEMFKGTNK--FGFTNLKVADGLLELLKDYLTVTPNGMIFVKPAIRKSLLAKMLGEIL 1533
Query: 662 DTRLMVKQSMKEYKFSESL 680
DTR+M+K +MK + ++SL
Sbjct: 1534 DTRVMIKHAMKGVRDNKSL 1552
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ YT P+IVLDFQSLYPS++IAYN C+STCLGRVE ++ F F
Sbjct: 1445 KYYTHPVIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGF 1489
>gi|398388499|ref|XP_003847711.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
gi|339467584|gb|EGP82687.1| hypothetical protein MYCGRDRAFT_77946 [Zymoseptoria tritici IPO323]
Length = 1595
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 283/529 (53%), Gaps = 54/529 (10%)
Query: 165 PPNKDSI----HEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAMTP 220
PP+ D + H+ ++ D ++ +ID P Q++ R + ID T
Sbjct: 660 PPSYDEVNEWLHQEQVDVEDDLETLEIDGPP------AGSQIKRKNRPAPELSQIDGPTQ 713
Query: 221 DTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCP 280
++ + H E Y++ +++E+H SR L PDP DEV + + +
Sbjct: 714 RNKHGFKFSQKKASTSVQH-ETGYMSTMSLEVHINSRGELAPDPERDEVSMVTWCIADEQ 772
Query: 281 PEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIET 340
++ ++GI+++ ++ + E +R+ ++G +++
Sbjct: 773 MDQTSRLGILVLTKDDD---------------------DEIAEKIRR-----IVGNDVQI 806
Query: 341 FSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLN 399
S NE +L + ++ VR++DPD+L GYE+ SWGYL+ER + NL
Sbjct: 807 DS---------EDNELDLINKTVDIVREYDPDVLTGYEVHNGSWGYLIERARLQYEFNLP 857
Query: 400 QELSRITEVEKRNSSRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYH 454
E SR+ +D + +++ GR IN+WR +R E+NL YT EN+++H
Sbjct: 858 DEFSRMKSQSHGRFGKDADRWGFTNTSTVRITGRHTINIWRAMRSELNLLQYTMENVVFH 917
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+LH RIP +S+ LT W++ + + +++ R + +++ + I RTSE ARL
Sbjct: 918 LLHRRIPHYSYATLTRWYQSKRPRDLVKVLNYFINRTKLDLEILDANELIPRTSEQARLL 977
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ F+ V SRGSQF+VES+M R+++ +F VSPS KQ A E LPL++EP+S Y+
Sbjct: 978 GVDFFSVFSRGSQFKVESLMFRIAKPESFALVSPSRKQVGAQNALECLPLVMEPQSAFYS 1037
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
P++VLDFQSLYPSV+IAYNYC+STCLGR+ + ++ F D + L+ + L
Sbjct: 1038 SPVLVLDFQSLYPSVMIAYNYCYSTCLGRITNWRGTNKMGFA--DFQRTPGLLELTKDKL 1095
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
ISP+G+ +V ++R +L KML EIL+TR+MVK MK K ++L+ L
Sbjct: 1096 NISPNGMMYVKPAMRKSLLAKMLGEILETRVMVKSGMKVDKADKTLQQL 1144
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
Query: 70 ESSLERSMKPDDRP--SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP+ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 994 ESLMFRIAKPESFALVSPSRKQVGAQNALECLPLVMEPQSA----FYSSPVLVLDFQSLY 1049
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 154
PSV+IAYNYC+STCLGR+ + ++ F
Sbjct: 1050 PSVMIAYNYCYSTCLGRITNWRGTNKMGFA 1079
>gi|429862842|gb|ELA37449.1| DNA polymerase zeta catalytic subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 1719
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 259/476 (54%), Gaps = 43/476 (9%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP ++ + H E Y++ +A+E+H +R P+P DEV+ IF+
Sbjct: 850 IDGPTPKNKHGFKYSPKKKSTSVKH-EAQYMSTMALEVHVNTRGKFVPNPEEDEVQCIFW 908
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + G I S +++ I V PD +
Sbjct: 909 SI--------KADGTI---------------------SASQDVAGGIIAGVVVLSPDGEL 939
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV- 393
+ + +LE S+E +L +E VR DPDIL GYE+ SWGYL+ER +
Sbjct: 940 AARMRRYIAAEILEE---SSELDLMVRMVEIVRAHDPDILTGYEVHGSSWGYLIERARLK 996
Query: 394 LGLNLNQELSRITE-----VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
+L E SR+ + K N + +++ GR +IN+WR +R E+NL YT
Sbjct: 997 YDYDLCDEFSRMKSNSHGRIGKENDRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYTM 1056
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
EN+++HVLH RIP +SW+ LT W++ + +YL R I+++E + I RTS
Sbjct: 1057 ENVVWHVLHRRIPHYSWRTLTEWYKSSKQRDLDKLLRYYLARTRIDIQILESNELIPRTS 1116
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP
Sbjct: 1117 EQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEP 1176
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR-VEHLGVSDSFPFGCIDLNVSIRSL 627
+S Y P++VLDFQSLYPSV+IAYN C+ST LGR V G++ G + R L
Sbjct: 1177 QSAFYNSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVNWRGMNK---MGFTEYQRHKRLL 1233
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ L+ ++ I+P+G+ +V IR +L KML EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1234 ELLKDHINITPNGMMYVRPEIRKSLLAKMLGEILETRVMVKSGMKQDKDDKTLQQL 1289
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1139 ESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1194
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYN C+ST LGR+
Sbjct: 1195 PSVMIAYNLCYSTFLGRI 1212
>gi|358384921|gb|EHK22518.1| hypothetical protein TRIVIDRAFT_191274 [Trichoderma virens Gv29-8]
Length = 1564
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 264/477 (55%), Gaps = 44/477 (9%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP + D++ + H E Y++ +++EIH +R P+P DE++ IF+
Sbjct: 708 IDGPTPKSKYDFKYSQKQPSAAVPH-EAQYMSTMSLEIHVNTRGNFVPNPEEDEIQCIFW 766
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ ++D G + EL + + D ++
Sbjct: 767 HW-----KDDEATG-----------------------NATNELLGSSKSGILVLSVDDIL 798
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV- 393
+I + +++ S+E +L + +E VR +DPDIL GYE+ SWGYL+ERG +
Sbjct: 799 AGQIRSAVPDEVVQE---SSELDLLNRMVEIVRFYDPDILTGYEVHGGSWGYLIERGRLK 855
Query: 394 LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
+L E SR+ K ++ + + +++ GR +IN+WR +R EVNL YT
Sbjct: 856 YDYDLCNEFSRMKAQSKGRFGKESDQWGFNTTSTIRVTGRHMINIWRAMRGEVNLLQYTM 915
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT--VEHYLIRVTGIIRLIEQLDFIGR 506
EN+++H+LH RIP +SWK LT W HR+ + + + +Y R + ++E + I R
Sbjct: 916 ENVVWHLLHRRIPHYSWKSLTSW--HRSGRAQDLNRLLRYYRTRTRLDLEILESNELISR 973
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++
Sbjct: 974 TSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVM 1033
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S Y+ P+IVLDFQSLYPSV+IAYNYC+ST LGR+ F + S
Sbjct: 1034 EPQSAFYSSPLIVLDFQSLYPSVMIAYNYCYSTFLGRITDWRGKSKMGFSEYKRQDGLLS 1093
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L ++ I+P+G+ +V +R +L KML EIL+TR+MVK MK+ + ++L+ L
Sbjct: 1094 L--LGDHINIAPNGMMYVKAEVRKSLLAKMLTEILETRIMVKSGMKQDQDDKTLQQL 1148
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y+ P+IVLDFQSLY
Sbjct: 998 ESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVMEPQSA----FYSSPLIVLDFQSLY 1053
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1054 PSVMIAYNYCYSTFLGRI 1071
>gi|325186586|emb|CCA21132.1| DNA polymerase zeta catalytic subunit putative [Albugo laibachii
Nc14]
Length = 1726
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 264/469 (56%), Gaps = 40/469 (8%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV---GIILIGQESELPEV 301
+T+L+VE+ A SR L PDPA D V AI Y + K+ GII+ E +
Sbjct: 814 ITILSVEVFAFSRGSLSPDPAIDAVGAISYAVSAKEGLHRSKIKATGIIINTTEDKAVPG 873
Query: 302 RTKPIQMNFVSNEK--ELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV-SNEKEL 358
+ F N + E F+ I R+ LIG + F G F SNE+E+
Sbjct: 874 SDIKLATGFRDNLRFDESFAQLISGKRK-----LIG---KRFCLGPHDAAAFAFSNEEEV 925
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--TEVEKRN---- 412
+ F V+ WDPD + G+E++ S GYL++R L +NL Q +SR+ T ++ RN
Sbjct: 926 ITCFNRVVQTWDPDFITGFEVQKSSIGYLVDRAMHLNINLIQTISRLPQTSIDARNPISH 985
Query: 413 ---SSRDEVKN-------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
+D KN + L + GR VINLWR+ R E+ L Y+ E+I+ +L
Sbjct: 986 VSVQEKDPEKNKASVGTVWGMAKASGLWIHGRHVINLWRVARSELKLARYSMEDIVQALL 1045
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
+ P +S++ ++ + + +W + H L R ++L+ ++ FI R+SEMARLFGI
Sbjct: 1046 KQTWPTYSYEQMSTSYRE-GGIRRWKMLNHLLKRAIMNLKLMSRMQFITRSSEMARLFGI 1104
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
FY VLSRGSQFRVE++MLR+++ NFV +SPS Q A E +PL++EP+SR Y+DP
Sbjct: 1105 DFYSVLSRGSQFRVEAVMLRVTKRKNFVLLSPSRNQVAAQAPMECIPLVMEPQSRYYSDP 1164
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF--PFGCIDLNVSIRSLKKLQQNL 634
++VLDFQSLYPS++IAYN C+ST GR+E+ G+S G + + Q++
Sbjct: 1165 VVVLDFQSLYPSLVIAYNLCYSTYFGRLEN-GMSPKLETSMGVTSFSPDEKGFLTCDQDI 1223
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
I+P+G F KS R G L +L+EIL TR+M+K +MK+ FS +NL
Sbjct: 1224 HIAPNGTLFCPKSHRQGALSAILEEILATRIMIKHAMKKSNFSGHSKNL 1272
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 33/38 (86%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
+ R Y+DP++VLDFQSLYPS++IAYN C+ST GR+E+
Sbjct: 1157 QSRYYSDPVVVLDFQSLYPSLVIAYNLCYSTYFGRLEN 1194
>gi|225558751|gb|EEH07035.1| polymerase zeta subunit [Ajellomyces capsulatus G186AR]
Length = 1628
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 255/449 (56%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++V+++E+H +R L P+P DE+ +F+ + + G I + +
Sbjct: 775 EAQYMSVMSLEVHVNTRGTLVPNPEEDEISCVFWCV---------QDGETEINDDDDSAG 825
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+ I ++ E E ++ I P ++ +E E H E +L +
Sbjct: 826 ITAGIIALS----ENESLASRI------SPTMISEFE----------EEH---TELDLLT 862
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVEKRNSS 414
++ VRQ DPDIL GYE+ SWGYL+ER Y +L ELSR+ + K N
Sbjct: 863 RLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTNSHGRIGKGNDR 922
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + ++ LT W+
Sbjct: 923 WGFNHTSSIRITGRHMINIWRAMRGELNLLQYTMENVVFHLLHQRIPHYPFQDLTKWFTS 982
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + ++L RV +++IE + I RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 983 KRPRDIAKVINYFLSRVQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLM 1042
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS++IAYN
Sbjct: 1043 FRIAKPENFILISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYN 1102
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGRV + G ID L+ L+ + I+P+G+ + + +R +L
Sbjct: 1103 YCYSTCLGRV--VSWRGQNKLGFIDFRRPAGLLELLKDQINIAPNGIIYAKQEVRKSLLA 1160
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K + L+ L
Sbjct: 1161 KMLIEILETRVMVKGGMKAAKDDKYLQRL 1189
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPS++IAYNYC+STCLGRV
Sbjct: 1080 FYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRV 1112
>gi|71006944|ref|XP_758078.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
gi|46097152|gb|EAK82385.1| hypothetical protein UM01931.1 [Ustilago maydis 521]
Length = 1678
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 252/451 (55%), Gaps = 45/451 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ ++T LAVE+ +R L PDPA D +++I Y ED + P+
Sbjct: 794 DKQHMTTLAVEVMTTTRDSLFPDPALDAIQSIVYSFQN----EDEN-----LQDTGSRPD 844
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYL-LERHFVSNEKELF 359
+RT I I+ G EI G L V +E ELF
Sbjct: 845 LRTGLI-------------------------IVSGDEINFDRLGLSHLAVEVVEDELELF 879
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSR--ITEVEKRNSSRD 416
+ I+ VR +DP+IL+G+EI + SWGY++ER +L ++ R I + D
Sbjct: 880 NTLIDLVRAFDPEILVGWEIHSSSWGYIVERASKEYDYDLVPQIGRAIIHNTGRAGGKSD 939
Query: 417 EVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
TQ L+ GR +NLWRL++ E+ L YT EN+ YH+LH RIP +S + LT W++
Sbjct: 940 NYAYTQSSALRFTGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRIPKYSHQTLTQWYK 999
Query: 474 H-RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
R L + + +Y+ V + +I + +F+ RT+E AR++GI F+ V+SRGSQF+VES
Sbjct: 1000 SGRAELIRRALL-YYVDMVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVES 1058
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
IMLR+++ NFV +SPS Q A E LPLI+EP+S Y P+IVLDFQSLYPS++IA
Sbjct: 1059 IMLRIAKPENFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIA 1118
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
YN C+STCLGRV G + FG + L LQ ++ IS +G+ FV S+R +
Sbjct: 1119 YNLCYSTCLGRV--AGFKGTSKFGVTEYAPPKGLLSLLQDDVNISSNGLLFVKPSVRKSL 1176
Query: 653 LPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L KML EILDTR+MVK SMK K +S + +
Sbjct: 1177 LAKMLSEILDTRVMVKSSMKATKSDKSFQRI 1207
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 155
Y P+IVLDFQSLYPS++IAYN C+STCLGRV G + FG
Sbjct: 1098 FYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRV--AGFKGTSKFGV 1141
>gi|325094502|gb|EGC47812.1| polymerase zeta subunit [Ajellomyces capsulatus H88]
Length = 1637
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 254/449 (56%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++V+++E+H +R L P+P DE+ +F+ + + G I + +
Sbjct: 780 EAQYMSVMSLEVHVNTRGTLVPNPEEDEISCVFWCV---------QDGETEINDDGDSAG 830
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+ I ++ E E + I P ++ +E E H E +L +
Sbjct: 831 ITAGIIALS----ENESLAARIS------PTMVSEFE----------EEH---TELDLLT 867
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVEKRNSS 414
++ VRQ DPDIL GYE+ SWGYL+ER Y +L ELSR+ + K N
Sbjct: 868 RLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTNSHGRIGKGNDR 927
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + ++ LT W+
Sbjct: 928 WGFNHTSSIRITGRHMINIWRAMRGELNLLQYTMENVVFHLLHQRIPHYPFQDLTKWFTS 987
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + ++L RV +++IE + I RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 988 KRPRDIAKVINYFLSRVQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLM 1047
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS++IAYN
Sbjct: 1048 FRIAKPENFILISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYN 1107
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGRV + G ID L+ L+ + I+P+G+ + + +R +L
Sbjct: 1108 YCYSTCLGRV--VSWRGQNKLGFIDFRRPAGLLELLKDQINIAPNGIIYAKQEVRKSLLA 1165
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K + L+ L
Sbjct: 1166 KMLIEILETRVMVKGGMKADKDDKHLQRL 1194
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPS++IAYNYC+STCLGRV
Sbjct: 1085 FYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRV 1117
>gi|367021872|ref|XP_003660221.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
gi|347007488|gb|AEO54976.1| hypothetical protein MYCTH_2298247 [Myceliophthora thermophila ATCC
42464]
Length = 1749
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 251/457 (54%), Gaps = 56/457 (12%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIG 293
E Y++ +++EIH SR L P+P +DEV+ IF+ L + ++ GI+++
Sbjct: 874 EAQYMSTMSLEIHVNSRGKLVPNPEHDEVQCIFWCLRSDEQCLLGSQSADNTICGIVVLS 933
Query: 294 QESELP-EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV 352
++ +L ++R++ T +E V +
Sbjct: 934 EDGDLAKQIRSQ---------------TSVEVVEE------------------------- 953
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKR 411
++E +L +E VR DPDIL GYE+ SWGYL+ER + +L E SR
Sbjct: 954 TSELDLMVRMVEIVRAHDPDILTGYEVHGSSWGYLIERAMLKYDYDLCNEFSRTKSESFG 1013
Query: 412 NSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
S +D + + L + GR +IN+WR +R E++L Y+ EN+++H+LH RIP SW+
Sbjct: 1014 RSGKDADRWGFRTTSMLHVTGRHIINIWRAMRGELDLLQYSMENVVWHLLHRRIPHFSWR 1073
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
LT WW + +YL R I ++E + I RTSE ARL G+ F+ V SRGS
Sbjct: 1074 ALTDWWLSGRPRDIGKVLRYYLRRTRMDIEILEANELIPRTSEQARLLGVDFFSVFSRGS 1133
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
QF+VESIM R+++ NF+ VSPS KQ A E LPL++EP S Y P++VLDFQSLY
Sbjct: 1134 QFKVESIMFRIAKPENFLLVSPSRKQVGAQNALECLPLVMEPHSAFYPSPLLVLDFQSLY 1193
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PSV+IAYNYC+STCLGR+ + + G D LK L+ ++ I+P+G+ +
Sbjct: 1194 PSVMIAYNYCYSTCLGRI--VSWRGTNKLGFTDYRRREGLLKLLKDHINIAPNGMMYTKP 1251
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
IR +L KML EIL+TR+MVK MKE K +L+ L
Sbjct: 1252 EIRKSLLAKMLTEILETRMMVKSGMKEDKDDRTLQKL 1288
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1138 ESIMFRIAKPENFLLVSPSRKQVGAQNALECLPLVMEPHSA----FYPSPLLVLDFQSLY 1193
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGR+
Sbjct: 1194 PSVMIAYNYCYSTCLGRI 1211
>gi|388853211|emb|CCF53077.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Ustilago
hordei]
Length = 1689
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 270/504 (53%), Gaps = 61/504 (12%)
Query: 195 KSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVT-SHVENYYLTVLAVEIH 253
+ + KQL + +RR I+ +T T DY + T + ++T+LAVE+
Sbjct: 756 EKIVEKQL-SKRRRARLLSQIERLT--QTNDYGFKISQHKATTLVARDKQHMTILAVEVL 812
Query: 254 AISRALLKPDPAYDEVKAIFYY-------LYTCPPEEDRKVGIILIGQESELPEVRTKPI 306
+R L PDPA+D V+AI Y L D + G+IL+ E
Sbjct: 813 TTTRGNLFPDPAFDPVQAIIYSFQNEDENLQDTGSRPDLRTGLILVANE----------- 861
Query: 307 QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENV 366
N ++ L +E V +E ELF+ I+ +
Sbjct: 862 --NMNADRLGLSHLAVE---------------------------VVEDELELFNTLIDLI 892
Query: 367 RQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSR--ITEVEKRNSSRDEVKNTQ- 422
R +DP+I++G+EI + SWGY++ER +L +L R + + D TQ
Sbjct: 893 RAFDPEIIVGWEIHSSSWGYIIERASKEYDFDLVPQLGRSVVHNTGRAGGKSDNYAYTQS 952
Query: 423 --LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-EHRTHLY 479
L++ GR +NLWRL++ E+ L YT EN+ YH+LH R+P S + LT W+ R L
Sbjct: 953 SALRITGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRMPKFSHQTLTQWFVSGRVELM 1012
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
+ + +++ V + +I + +F+ RT+E AR++GI F+ V+SRGSQF+VESIMLR+++
Sbjct: 1013 RKALL-YFVDTVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESIMLRIAK 1071
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
NFV +SPS Q A E LPLI+EP+S Y P+IVLDFQSLYPS++IAYN C+ST
Sbjct: 1072 PENFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAYNLCYST 1131
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
CLGRV G + FG +D L LQ ++ IS +G+ FV +R +L KML E
Sbjct: 1132 CLGRV--AGFKGTSKFGVVDYAPPKGLLSLLQDDVNISSNGLLFVKPHVRKSLLAKMLSE 1189
Query: 660 ILDTRLMVKQSMKEYKFSESLRNL 683
ILDTR+MVK SMK K +S + +
Sbjct: 1190 ILDTRVMVKGSMKGTKADKSFQRI 1213
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCI 156
Y P+IVLDFQSLYPS++IAYN C+STCLGRV G + FG +
Sbjct: 1104 FYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRV--AGFKGTSKFGVV 1148
>gi|302419923|ref|XP_003007792.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261353443|gb|EEY15871.1| DNA polymerase zeta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1611
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 182/492 (36%), Positives = 273/492 (55%), Gaps = 46/492 (9%)
Query: 200 KQLETPKRRICDSYA-IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRA 258
K L++PK + Y+ ID TP T ++ + H E Y++ +++E+H +R
Sbjct: 738 KSLQSPK--MNHHYSQIDGPTPRNTHGFKYTQKKKSSGIKH-EIQYMSTMSLEVHVNTRG 794
Query: 259 LLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELF 318
L PDP +DEV+ IF+ + + G I + QE+ ++ + +S++ L
Sbjct: 795 HLVPDPEHDEVQCIFWSI--------KADGSISVSQEAAGAMIQG----IVLLSSDGSL- 841
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
E VR+ ++ E +LF +E VR DPDIL GYE
Sbjct: 842 ---AERVRRQTSVEVVEEMEEL----------------DLFVRMVEIVRTHDPDILTGYE 882
Query: 379 IETLSWGYLLERGYV-LGLNLNQELSRIT-----EVEKRNSSRDEVKNTQLQMPGRIVIN 432
+ SWGYL+ER V +L E SR+ + K N + +++ GR +IN
Sbjct: 883 VHGSSWGYLIERARVKYDYDLCDEFSRMKSNSHGRIGKENDRWGFNTTSTIRVTGRHMIN 942
Query: 433 LWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVT 492
+WR +R E+NL Y+ EN+++H+LH RIP +SW LT W++ H + +YL R
Sbjct: 943 VWRAMRGELNLLQYSMENVVWHLLHRRIPHYSWSTLTKWYKSGMHRDMSKLMRYYLSRTR 1002
Query: 493 GIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ 552
I +IE + I RTSE ARL G+ F+ V SRGSQ++VESIM R+++ NF+ VSPS +Q
Sbjct: 1003 LDIDIIEANELIPRTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPENFILVSPSRQQ 1062
Query: 553 RAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL-GVSD 611
A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYN C+ST LGR+ + G++
Sbjct: 1063 VGGQNALECLPLVMEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFLGRITNWRGMNK 1122
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G + R L+ L+ ++ I+P+G+ F IR +L KML EIL+TR+MVK M
Sbjct: 1123 ---MGFTEYKRHQRLLELLKDHINITPNGMMFAKPEIRKSLLAKMLGEILETRVMVKSGM 1179
Query: 672 KEYKFSESLRNL 683
K+ K SL+ L
Sbjct: 1180 KQDKDDRSLQQL 1191
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+R+ +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1041 ESIMFRIAKPENFILVSPSRQQVGGQNALECLPLVMEPQSA----FYSSPVLVLDFQSLY 1096
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYN C+ST LGR+
Sbjct: 1097 PSVMIAYNLCYSTFLGRI 1114
>gi|134108036|ref|XP_777400.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260090|gb|EAL22753.1| hypothetical protein CNBB2010 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1973
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 252/440 (57%), Gaps = 41/440 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+++L +E+ A SR L PDP D V AIFY C D +LP+
Sbjct: 1126 MSILTMEVFAQSRGTLLPDPEKDAVTAIFY----CYSNTD-----------DDLPDTTIY 1170
Query: 305 P-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
P +V + S R DI +E+ V +E L + I
Sbjct: 1171 PGYHAGYV-----VTSALANPARLRLDDI--PFEV-------------VEDELALINWVI 1210
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI--TEVEKRNSSRDEVKN 420
+ V+ WDPD+L G+E+ SWGYL R +++ ++SRI RN +
Sbjct: 1211 DIVKFWDPDVLAGWELHNSSWGYLAARASGEFAMDMMDQISRIISGRTGPRNDGYSAHHS 1270
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ ++ GR +N+WR+ R E+NL YTFEN+++H+LH+RIP +S LT W+ + +
Sbjct: 1271 STFKVVGRHTLNIWRICRSEINLTQYTFENVVFHLLHQRIPHYSPSSLTALWKSKYPSHA 1330
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
++++ R + +++Q + I +T+E AR+FG+ F VL+RGSQ++VES + R+++
Sbjct: 1331 CRVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESFIFRIAKP 1390
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
+FV VSPS +Q AP ++PLI EPES+ YT P+IVLDFQSLYPS++IAYN C+STC
Sbjct: 1391 ESFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAYNICYSTC 1450
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGRVE ++ FG +L V+ L+ L+ LT++P+G+ FV +IR +L KML EI
Sbjct: 1451 LGRVEMFKGTNK--FGFTNLKVTEGLLELLKDYLTVTPNGMIFVKPAIRKSLLAKMLGEI 1508
Query: 661 LDTRLMVKQSMKEYKFSESL 680
LDTR+M+K +MK + +SL
Sbjct: 1509 LDTRVMIKHAMKGARGDKSL 1528
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ YT P+IVLDFQSLYPS++IAYN C+STCLGRVE ++ F F
Sbjct: 1421 KYYTHPVIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGF 1465
>gi|58264096|ref|XP_569204.1| zeta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223854|gb|AAW41897.1| zeta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1940
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 252/440 (57%), Gaps = 41/440 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+++L +E+ A SR L PDP D V AIFY C D +LP+
Sbjct: 1093 MSILTMEVFAQSRGTLLPDPEKDAVTAIFY----CYSNTD-----------DDLPDTTIY 1137
Query: 305 P-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
P +V + S R DI +EI V +E L + I
Sbjct: 1138 PGYHAGYV-----VTSALANPARLRLDDI--PFEI-------------VEDELALINWVI 1177
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI--TEVEKRNSSRDEVKN 420
+ V+ WDPD+L G+E+ SWGYL R +++ ++SRI RN +
Sbjct: 1178 DIVKFWDPDVLAGWELHNSSWGYLAARASGEFAMDMMDQISRIISGRTGPRNDGYSAHHS 1237
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ ++ GR +N+WR+ R E+NL YTFEN+++H+LH+RIP +S LT W+ + +
Sbjct: 1238 STFKVVGRHTLNIWRICRSEINLTQYTFENVVFHLLHQRIPHYSPSSLTALWKSKYPSHA 1297
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
++++ R + +++Q + I +T+E AR+FG+ F VL+RGSQ++VES + R+++
Sbjct: 1298 CRVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGVDFASVLTRGSQYKVESFIFRIAKP 1357
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
+FV VSPS +Q AP ++PLI EPES+ YT P+IVLDFQSLYPS++IAYN C+STC
Sbjct: 1358 ESFVLVSPSKQQVGLQNAPFAVPLIAEPESKYYTHPVIVLDFQSLYPSIMIAYNICYSTC 1417
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGRVE ++ FG +L V+ L+ L+ LT++P+G+ FV +IR +L KML EI
Sbjct: 1418 LGRVEMFKGTNK--FGFTNLKVTEGLLELLKDYLTVTPNGMIFVKPAIRKSLLAKMLGEI 1475
Query: 661 LDTRLMVKQSMKEYKFSESL 680
LDTR+M+K +MK + +SL
Sbjct: 1476 LDTRVMIKHAMKGARGDKSL 1495
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ YT P+IVLDFQSLYPS++IAYN C+STCLGRVE ++ F F
Sbjct: 1388 KYYTHPVIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGF 1432
>gi|451997476|gb|EMD89941.1| hypothetical protein COCHEDRAFT_1178083 [Cochliobolus heterostrophus
C5]
Length = 1754
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 257/456 (56%), Gaps = 45/456 (9%)
Query: 234 NEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIG 293
N + ++ Y++++++E+H SR L PDPA DE++ +F+ +
Sbjct: 867 NSASVRHQSQYMSIMSLEVHVNSRGSLLPDPAEDEIQCVFWSI----------------- 909
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
+ E V +P + ++K+ + I + E+E +
Sbjct: 910 -QDEENVVTDRPRKGILCFSDKDGIAVRIAK--------QVSVEVE-----------YEE 949
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRN 412
+E +L + ++ VRQ+DPDIL GYE+ SWGYL+ER NL E+SR+
Sbjct: 950 DELDLINRLVDIVRQFDPDILTGYEVHNNSWGYLIERARTKYEYNLCDEISRMKSQSYGG 1009
Query: 413 SSRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ + +++ GR +IN+WR + E+NL YT EN+++H+LH+RIP +
Sbjct: 1010 FGKEADRWGFTHTSTIRVTGRHMINIWRAMHAELNLLQYTMENVVFHLLHKRIPHYQHLD 1069
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
LT W+ + +++++ RV L+E D + RTSE ARL GI F+ V+SRGSQ
Sbjct: 1070 LTTWYTNGKPRDLAKVLDYFITRVQLNFDLLEATDIVPRTSEQARLLGIDFFAVISRGSQ 1129
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
F+VES M R+++ NF+ VSPS KQ A E LPL++EP+S Y+ P+IVLDFQSLYP
Sbjct: 1130 FKVESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSAFYSSPVIVLDFQSLYP 1189
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
SV+IAYNYC+STCLGR+ + D G +D + L+ ++ ++ I+P+G+ +V
Sbjct: 1190 SVMIAYNYCYSTCLGRI--VSWRDRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKPE 1247
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+R +L ML EIL+TR+MVK MKE K ++L+ L
Sbjct: 1248 MRKSLLANMLGEILETRVMVKSGMKEDKDDKTLQKL 1283
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES++ R KP++ SP+RK +++ + M P S+ Y+ P+IVLDFQSLY
Sbjct: 1133 ESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSA----FYSSPVIVLDFQSLY 1188
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGR+
Sbjct: 1189 PSVMIAYNYCYSTCLGRI 1206
>gi|378734453|gb|EHY60912.1| DNA polymerase zeta subunit [Exophiala dermatitidis NIH/UT8656]
Length = 1773
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 259/485 (53%), Gaps = 58/485 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID T ++ ++ H E Y++++ +E+H +R L P+P D V IF+
Sbjct: 885 IDGPTQKNKYGFKYSQKQVSTSVQH-ETQYMSIMTLEVHVNTRGSLAPNPEEDAVSCIFW 943
Query: 275 YLYTCPPE----------EDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIEN 324
L T + E +GII +G ++ + + + + + E EL
Sbjct: 944 CLQTDDEDVEANMTKGSKEGTHMGIIAVGDQAHIAKRIGRTVPYDVEEEETEL------- 996
Query: 325 VRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSW 384
+ + ++ VR +DPDIL GYE+ SW
Sbjct: 997 --------------------------------DALTRLVDIVRHYDPDILTGYEVHNSSW 1024
Query: 385 GYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLR 438
GYL+ER V LN ELSR+ RD+ + + +++ GR IN+WR +R
Sbjct: 1025 GYLIERARVKYDLNYCDELSRMKAQSHGRFGRDDDRWGFNHTSTIRVTGRHTINIWRAMR 1084
Query: 439 HEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLI 498
E+NL YT EN++YH+LH+RIP +++ LT W+ + VE++ RV I ++
Sbjct: 1085 GELNLLQYTMENVVYHLLHQRIPHYAFVDLTRWYRSKNPRNLAKVVEYFCSRVQMDIEIL 1144
Query: 499 EQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRA 558
+ + + RTSE ARL G+ ++ V+SRGSQF+VES+M R+++ NF+ VSPS +Q A
Sbjct: 1145 DANELVPRTSEQARLLGVDWFSVISRGSQFKVESLMFRIAKPENFILVSPSRRQVGGQNA 1204
Query: 559 PESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCI 618
E LPL++EP S YT P++VLDFQSLYPSV+IAYNYC+ST LGRV + + G
Sbjct: 1205 LECLPLVMEPRSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRV--VSWRGTNKMGFT 1262
Query: 619 DLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSE 678
D R L+ L++++ I+P+G+ + IR +L KML EIL+TR+MVK MK K +
Sbjct: 1263 DYRREPRLLELLKEHINIAPNGIMYAKPHIRKSLLAKMLSEILETRVMVKSGMKVDKDDK 1322
Query: 679 SLRNL 683
+L+ L
Sbjct: 1323 TLQRL 1327
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
R YT P++VLDFQSLYPSV+IAYNYC+ST LGRV
Sbjct: 1215 RSDFYTSPLLVLDFQSLYPSVMIAYNYCYSTFLGRV 1250
>gi|189202408|ref|XP_001937540.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984639|gb|EDU50127.1| DNA polymerase zeta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1633
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 258/446 (57%), Gaps = 45/446 (10%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
Y++++++E+H SR L PD A DE++ IF+ + G+E+ + R
Sbjct: 771 YMSIMSLEVHVNSRGSLVPDAAEDEIQCIFWSVQ---------------GEENATTD-RP 814
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+ F S+E + + VR + + YE +E +L + +
Sbjct: 815 HAGILCF-SDEDGIAVRIAKQVR-----VDVEYE---------------EDELDLINRLV 853
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDE----- 417
+ VRQ+DPDIL GYE+ SWGYL+ER + NL +E+SR+ + +D
Sbjct: 854 DIVRQFDPDILTGYEVHNGSWGYLIERARMKYEYNLCEEISRVRSLSPGKVGKDADRWGF 913
Query: 418 VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + LT W+ +
Sbjct: 914 THTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHYQHSDLTTWYTNGRP 973
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ ++ RV + ++E D + RTSE ARL G+ F+ V+SRGSQF+VES M R+
Sbjct: 974 RDLTKVINYFTTRVQLNLDILEANDIVPRTSEQARLLGVDFFAVISRGSQFKVESTMFRI 1033
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSLYPSV+IAYNYC+
Sbjct: 1034 AKPENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPVLVLDFQSLYPSVMIAYNYCY 1093
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
STCLGR+ + + G +D + L+ ++ ++ I+P+G+ +V +R +L KML
Sbjct: 1094 STCLGRIVNWRGRNK--MGFMDFKREPQLLELVKDHINIAPNGMMYVKPEMRKSLLAKML 1151
Query: 658 QEILDTRLMVKQSMKEYKFSESLRNL 683
EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1152 GEILETRVMVKSGMKQDKNDKTLQQL 1177
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES++ R KP++ SP+RK +++ + M P S+ YT P++VLDFQSLY
Sbjct: 1027 ESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSA----FYTSPVLVLDFQSLY 1082
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGR+
Sbjct: 1083 PSVMIAYNYCYSTCLGRI 1100
>gi|321248956|ref|XP_003191299.1| zeta DNA polymerase [Cryptococcus gattii WM276]
gi|317457766|gb|ADV19512.1| zeta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1991
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 255/448 (56%), Gaps = 43/448 (9%)
Query: 238 SHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY-YLYTCPPEEDRKVGIILIGQES 296
S + +++L +E+ A SR L PDP D + AIFY Y T ++
Sbjct: 1136 SSADPQSMSILTMEVFAQSRGTLLPDPEKDAITAIFYCYSNT----------------DN 1179
Query: 297 ELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
+LP+ P +V + R DI +E+ V +E
Sbjct: 1180 DLPDTTIHPGYHAGYV-----VVGALANPARLRLDDI--PFEV-------------VEDE 1219
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI--TEVEKRN 412
L + I+ V+ DPD+L G+E+ SWGYL R G+++ ++SR+ RN
Sbjct: 1220 LALINWVIDTVKFCDPDVLAGWELHNSSWGYLAARASGEFGMDMMDQISRVISGRAGPRN 1279
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
++ ++ GR +N+WR+ R E+NL YTFEN+++H+LH+RIP +S LT W
Sbjct: 1280 DGYSAHHSSTFKVAGRHTLNIWRICRSEINLTQYTFENVVFHLLHQRIPHYSPASLTALW 1339
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
++ + ++++ R + +++Q + I +T+E AR+FGI F VL+RGSQ++VES
Sbjct: 1340 RSKSPSHVCHVLKYFFQRTVMCMEILDQAEIITKTAEFARVFGIDFASVLTRGSQYKVES 1399
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+ R+++ +FV VSPS +Q AP S+PLI EPES+ YT PIIVLDFQSLYPS++IA
Sbjct: 1400 FIFRIAKPESFVLVSPSKQQVGLQNAPFSVPLIAEPESKYYTHPIIVLDFQSLYPSIMIA 1459
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
YN C+STCLGRVE ++ FG +L V+ L+ L+ LT++P+G+ FV ++R +
Sbjct: 1460 YNICYSTCLGRVEMFKGTNK--FGFTNLKVADGLLELLKDYLTVTPNGMIFVKPAVRKSL 1517
Query: 653 LPKMLQEILDTRLMVKQSMKEYKFSESL 680
L KML EILDTR+M+K +MK + +SL
Sbjct: 1518 LAKMLVEILDTRVMIKHAMKGARDDKSL 1545
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ YT PIIVLDFQSLYPS++IAYN C+STCLGRVE ++ F F
Sbjct: 1438 KYYTHPIIVLDFQSLYPSIMIAYNICYSTCLGRVEMFKGTNKFGF 1482
>gi|169595886|ref|XP_001791367.1| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
gi|160701180|gb|EAT92185.2| hypothetical protein SNOG_00690 [Phaeosphaeria nodorum SN15]
Length = 1584
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 256/463 (55%), Gaps = 55/463 (11%)
Query: 232 NLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEE----DR-K 286
N T E Y++++++E+H SR L PDPA DE++ IFY + EE DR +
Sbjct: 694 NKKLTTVKHETQYMSIMSLEVHVNSRGSLVPDPAEDEIQCIFYSIQG---EENATTDRPR 750
Query: 287 VGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYL 346
+GI+ + + + E K ++ E EL
Sbjct: 751 LGILCLSTDDGIVERIAKQSSVDVEHEEDEL----------------------------- 781
Query: 347 LERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI 405
+L + ++ VRQ+DPDIL GYE+ SWGYL+ER + NL E+SR+
Sbjct: 782 ----------DLINRIVDIVRQFDPDILAGYEVHNSSWGYLIERARMKYEYNLCDEISRM 831
Query: 406 TEVEKRNSSRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
++ + +++ GR +IN+WR +R E+NL YT EN+++H+LH RI
Sbjct: 832 KSQSHGRFGKEADRWGFTHTSTIRITGRHMINIWRAMRGELNLLQYTMENVVFHLLHRRI 891
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
P + LT W+ ++H+L RV + ++E + + RTSE ARL G+ F+
Sbjct: 892 PHYQHSDLTGWYRSSKPRELAKVLDHFLTRVQLNLDILEANEIVPRTSEQARLLGVDFFA 951
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
V+SRGSQF+VES M R+++ NF+ +SPS KQ A E LPL++EP+S Y+ P++VL
Sbjct: 952 VISRGSQFKVESTMFRIAKPENFILISPSRKQVGQQNALECLPLVMEPQSAFYSSPLLVL 1011
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DFQSLYPSV+IAYNYC+STCLGR+ + G +D + L+ ++ + I+P+G
Sbjct: 1012 DFQSLYPSVMIAYNYCYSTCLGRI--VSWRGRNKMGFMDFKREPQLLELVKDYINIAPNG 1069
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ +V +R +L KML EIL+TR+M+K MK+ K ++L+ L
Sbjct: 1070 MMYVKPEMRKSLLAKMLGEILETRVMIKSGMKQDKDDKTLQQL 1112
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES++ R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 962 ESTMFRIAKPENFILISPSRKQVGQQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1017
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGR+
Sbjct: 1018 PSVMIAYNYCYSTCLGRI 1035
>gi|67537238|ref|XP_662393.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|18031889|gb|AAL09153.1| polymerase zeta subunit [Emericella nidulans]
gi|40741169|gb|EAA60359.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|259482365|tpe|CBF76778.1| TPA: DNA polymerase (EC 2.7.7.7) [Source:UniProtKB/TrEMBL;Acc:Q8X142]
[Aspergillus nidulans FGSC A4]
Length = 1681
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 250/455 (54%), Gaps = 52/455 (11%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTC--PPEEDRKVGIILIG----Q 294
+ Y++ +++E+H +R +L P+P DE+ A F+ + + P EED + ++ +G
Sbjct: 834 QTQYMSTMSLEVHVNTRGVLLPNPEEDEIAAFFWCVNSEDEPQEEDDSLSVVNMGVVFQG 893
Query: 295 ESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSN 354
E E PE + S E S
Sbjct: 894 EEEYPESK--------------------------------------ISKALRFECEHEST 915
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNS 413
E +L + ++ VR DPDI+ GYE+ SWG+++ER +L ELSR+
Sbjct: 916 ELDLINRLVDIVRLHDPDIITGYEVHNSSWGFIIERARKKYDFDLCDELSRVKSHAHGRF 975
Query: 414 SRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
++ K + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +S++ L
Sbjct: 976 GKEADKWGFDHTSSIRITGRHIINIWRAMRSEMNLLQYTMENVVFHLLHRRIPHYSFRDL 1035
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
T W++ + +Y RV I ++ + I RTSE ARL GI FY V SRGSQF
Sbjct: 1036 TAWYQSDKPRDFMKVINYYTSRVQMNIEILNANELIPRTSEQARLLGIDFYSVFSRGSQF 1095
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VES+M R+++ NF+ VSPS KQ A E LPL++EP+S YT P+IVLDFQSLYPS
Sbjct: 1096 KVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPS 1155
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
++IAYNYC+ST LGRV+ + G +D N R L+ L+ ++ I+P+G+ + +
Sbjct: 1156 IMIAYNYCYSTFLGRVQSWRGRNK--MGFLDYNRPPRLLELLKDHINIAPNGMIYARSEV 1213
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK K +L+ L
Sbjct: 1214 RKSLLAKMLTEILETRVMVKTGMKVDKDDRALQRL 1248
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P+IVLDFQSLY
Sbjct: 1098 ESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLIVLDFQSLY 1153
Query: 125 PSVIIAYNYCFSTCLGRVE 143
PS++IAYNYC+ST LGRV+
Sbjct: 1154 PSIMIAYNYCYSTFLGRVQ 1172
>gi|171676135|ref|XP_001903021.1| hypothetical protein [Podospora anserina S mat+]
gi|170936133|emb|CAP60793.1| unnamed protein product [Podospora anserina S mat+]
Length = 1751
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 258/461 (55%), Gaps = 59/461 (12%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY-------YLYTCPPEEDRKV-GIILI 292
E Y++ +++EIH +R L P+P DE++ +F+ L+ E+ + GII++
Sbjct: 871 EAQYMSTMSLEIHVNTRGKLVPNPEEDEIQCLFWCMRSDEQVLFGGSQAENGTLSGIIVL 930
Query: 293 GQESELPE-VRTK-PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERH 350
++ L E +R + P +++ V+ E EL
Sbjct: 931 SEDGLLAEQIRKQMPSKVDVVAEESEL--------------------------------- 957
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVE 409
EL + +E VR DPDIL GYE+ SWGY++ER G G +L E SR+
Sbjct: 958 ------ELMNKIVEIVRMHDPDILTGYEVHGGSWGYVVERAGRQYGYDLCNEFSRMKSSS 1011
Query: 410 KR--NSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
S R+ + + + + GR VIN+WR +R E+NL YT EN+++H+LH R+P
Sbjct: 1012 PSFGKSGREADRWGFNTTSTIHVTGRHVINVWRAMRGELNLLQYTMENVVWHLLHRRMPH 1071
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
SWK LT W++ + ++L R I ++E + I RTSE ARL G+ F+ V
Sbjct: 1072 FSWKDLTEWYKSGRPRDLAKVLRYHLKRTRMNIEILEANELIPRTSEQARLLGVDFFSVF 1131
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP S YT P++VLDF
Sbjct: 1132 SRGSQFKVESIMFRIAKPENFLLVSPSRKQVGAQNALECLPLVMEPLSSFYTSPVLVLDF 1191
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
QSLYPSV+IAYNYC+STCLGR+ + ++ F + LK L+ ++ I+P+G+
Sbjct: 1192 QSLYPSVMIAYNYCYSTCLGRIVNWRGTNKMGFTEYKRREGL--LKLLEPHINIAPNGLM 1249
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ +IR +L KML EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1250 YTKPTIRKSLLAKMLTEILETRVMVKSGMKQDKDDKTLQQL 1290
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P SS YT P++VLDFQSLY
Sbjct: 1140 ESIMFRIAKPENFLLVSPSRKQVGAQNALECLPLVMEPLSS----FYTSPVLVLDFQSLY 1195
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRES 161
PSV+IAYNYC+STCLGR+ + ++ F RE
Sbjct: 1196 PSVMIAYNYCYSTCLGRIVNWRGTNKMGFTEYKRREG 1232
>gi|302919112|ref|XP_003052793.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733733|gb|EEU47080.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1682
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 258/475 (54%), Gaps = 41/475 (8%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP ++ H E Y++ +++E+H +R P+P DEV+ +F+
Sbjct: 815 IDGPTPKNKHGFKYTQGKKTTSVEH-EAQYMSTMSLEVHVNTRGKFVPNPEEDEVQCVFW 873
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
L K +IG +++ V+T + + S+ E +R+ +I
Sbjct: 874 AL---------KSDETVIGSQNQAEAVQTGILVLAGDSD-------LTERIRRQTTAEVI 917
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV- 393
++E +L +E VR DPDIL GYE+ SWGY++ER +
Sbjct: 918 EE----------------TSELDLMVRMVEIVRTHDPDILTGYEVHGSSWGYMIERARLK 961
Query: 394 LGLNLNQELSRI-TEVEKRNSSRDEV----KNTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
NL E SR+ TE R ++ + +++ GR +IN+WR +R E+NL YT
Sbjct: 962 YDYNLCDEFSRMKTESHGRFGKENDRWGFNTTSTIRVTGRHMINVWRAMRGELNLLQYTM 1021
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
EN+++H+LH RIP +SWK LT W++ H + +Y R I ++E + I RTS
Sbjct: 1022 ENVVWHLLHRRIPHYSWKSLTSWYKSGKHRELGRMLRYYQNRTRLDIEILEANELIARTS 1081
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP
Sbjct: 1082 EQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLVMEP 1141
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+S Y P++VLDFQSLYPSV+IAYNYC+ST LGR+ + + F + +L
Sbjct: 1142 QSAFYNSPLVVLDFQSLYPSVMIAYNYCYSTFLGRITNWRGMNKMGFTEYKRQQGLLAL- 1200
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L+ + I+P+G+ + IR +L KML EIL+TR+MVK MK+ K + L+ L
Sbjct: 1201 -LEDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQDKDDKVLQQL 1254
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1104 ESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPLVVLDFQSLY 1159
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1160 PSVMIAYNYCYSTFLGRI 1177
>gi|443899578|dbj|GAC76909.1| DNA polymerase zeta, catalytic subunit [Pseudozyma antarctica T-34]
Length = 1665
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 251/450 (55%), Gaps = 43/450 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ ++T LAVE+ +RA L PDPA+D ++A+ Y ED + P+
Sbjct: 792 DKQHMTTLAVEVLNTTRAGLFPDPAFDAIQAVIYSFQN----EDEN-----LQDTGSRPD 842
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+RT I V+N G+ E +L V +E +LF+
Sbjct: 843 LRTGLI---VVANG--------------------GFRAERLGLSHLAV-EVVEDELDLFN 878
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSR--ITEVEKRNSSRDE 417
I+ +R +DP+IL+G+EI + SWGY++ER +L + R + + D
Sbjct: 879 ALIDLMRAFDPEILVGWEIHSSSWGYIIERASKEFEFDLVPQFGRSIVHNTGRAGGKSDN 938
Query: 418 VKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-E 473
TQ L++ GR +NLWRL++ E+ L YT EN+ YH+LH R+P S + LT W+
Sbjct: 939 YAYTQSSALRITGRHTLNLWRLMKGELTLNLYTLENVCYHLLHRRVPKFSHQTLTEWYTS 998
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
R L + + +Y+ V + +I + +F+ RT+E AR++GI F+ V+SRGSQF+VESI
Sbjct: 999 GRAELVRRALL-YYVEMVELELEIIAESEFVLRTAEFARIYGIDFFSVISRGSQFKVESI 1057
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
MLR+++ NFV +SPS Q A E LPLI+EP+S Y P+IVLDFQSLYPS++IAY
Sbjct: 1058 MLRIAKPENFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGPLIVLDFQSLYPSIMIAY 1117
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
N C+STCLGRV G + G D L LQ ++ IS +G+ FV +R +L
Sbjct: 1118 NLCYSTCLGRV--AGFKGTSKLGVTDYAPPKGLLSLLQDDVNISSNGLLFVKPRVRKSLL 1175
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EILDTR+MVK SMK K +S + +
Sbjct: 1176 AKMLSEILDTRVMVKASMKGTKADKSFQRI 1205
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 6/49 (12%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV------EHLGVSDSFP 152
Y P+IVLDFQSLYPS++IAYN C+STCLGRV LGV+D P
Sbjct: 1096 FYKGPLIVLDFQSLYPSIMIAYNLCYSTCLGRVAGFKGTSKLGVTDYAP 1144
>gi|346977462|gb|EGY20914.1| DNA polymerase zeta catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1499
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 272/492 (55%), Gaps = 46/492 (9%)
Query: 200 KQLETPKRRICDSYA-IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRA 258
K L++PK + Y+ ID TP T ++ + H E Y++ +++E+H +R
Sbjct: 643 KSLQSPK--VNHHYSQIDGPTPRNTHGFRYNQKKKSSGIKH-EIQYMSTMSLEVHVNTRG 699
Query: 259 LLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELF 318
L PDP +DEV+ IF+ + + G I + QE+ ++ + +S++ L
Sbjct: 700 HLVPDPEHDEVQCIFWSI--------KADGSISVSQEAAGAMIQG----IVLLSSDGSL- 746
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
E VR+ ++ E +LF +E VR DPDIL GYE
Sbjct: 747 ---AERVRRQTSVEVVEEMEEL----------------DLFVRMVEIVRTHDPDILTGYE 787
Query: 379 IETLSWGYLLERGYV-LGLNLNQELSRIT-----EVEKRNSSRDEVKNTQLQMPGRIVIN 432
+ SWGYL+ER V +L E SR+ + K N + +++ GR +IN
Sbjct: 788 VHGSSWGYLIERARVKYDYDLCDEFSRMKSNSHGRIGKENDRWGFNTTSTIRVTGRHMIN 847
Query: 433 LWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVT 492
+WR +R E+NL Y+ EN+++H+LH RIP +SW LT W++ H + +YL R
Sbjct: 848 VWRAMRGELNLLQYSMENVVWHLLHRRIPHYSWSTLTKWYKSGIHRDMSKLLRYYLSRTR 907
Query: 493 GIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ 552
I +IE + I RTSE ARL G+ F+ V SRGSQ++VESIM R+++ NF+ VSPS +Q
Sbjct: 908 LDIDIIEANELIPRTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPENFILVSPSRQQ 967
Query: 553 RAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL-GVSD 611
A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYN C+ST LGR+ G++
Sbjct: 968 VGGQNALECLPLVMEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFLGRITSWRGMNK 1027
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G + R L+ L+ ++ I+P+G+ + IR +L KML EIL+TR+MVK M
Sbjct: 1028 ---MGFTEYKRHQRLLELLKDHINITPNGMMYAKPEIRKSLLAKMLGEILETRVMVKSGM 1084
Query: 672 KEYKFSESLRNL 683
K+ K SL+ L
Sbjct: 1085 KQDKDDRSLQQL 1096
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+R+ +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 946 ESIMFRIAKPENFILVSPSRQQVGGQNALECLPLVMEPQSA----FYSSPVLVLDFQSLY 1001
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYN C+ST LGR+
Sbjct: 1002 PSVMIAYNLCYSTFLGRI 1019
>gi|440633310|gb|ELR03229.1| hypothetical protein GMDG_01212 [Geomyces destructans 20631-21]
Length = 1742
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 255/444 (57%), Gaps = 41/444 (9%)
Query: 237 TSHVEN--YYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQ 294
TS ++N Y++V+++E+H +R L P+P DE++ +F+ L ++G
Sbjct: 883 TSTLQNNAQYMSVMSLEVHINTRGNLAPNPQEDEIQCVFWNL---------QLG------ 927
Query: 295 ESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSN 354
E + T + + E T N+ + P I F S+
Sbjct: 928 EDHPDNLGTGGVSHGGIVALSENGQT-ARNIAKQTP-------IHVFE---------ESS 970
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNS 413
E +L +E VR DPDIL GYE+ SWGYL+ER + +L +ELSR+ + +S
Sbjct: 971 ELDLLVRIVEFVRANDPDILTGYEVHNCSWGYLVERAKLKYEYDLCEELSRMHTHSRGHS 1030
Query: 414 SRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+D K + + + GR +IN+WR +R+E+NL YT EN+++H+LH RIP ++W+ L
Sbjct: 1031 EKDSDKWGSRHTSAISVTGRHMINIWRAMRNELNLLQYTMENVVFHLLHRRIPHYAWRDL 1090
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
T W+ +E+YL RV + +++Q + I RTSE ARL G+ F+ VLSRGSQF
Sbjct: 1091 TMWYTSGKFADLAKVIEYYLCRVQLNLAILDQSELITRTSEQARLLGVDFFSVLSRGSQF 1150
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VES+M R+++ NFV VSPS KQ A E LPL++EP+S YT P++VLDFQSLYPS
Sbjct: 1151 KVESLMFRIAKPENFVLVSPSRKQVGAQNALECLPLVMEPQSAFYTSPLLVLDFQSLYPS 1210
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST +GR+ + + G + R L+ L+ + ISP+G+ + I
Sbjct: 1211 VMIAYNYCYSTFMGRIVNW-RGGTGKMGFTEYQRQDRLLELLKDFINISPNGMMYTKPEI 1269
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R +L KML EIL+TR+MVK MK
Sbjct: 1270 RKSLLAKMLGEILETRVMVKSGMK 1293
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ YT P++VLDFQSLY
Sbjct: 1153 ESLMFRIAKPENFVLVSPSRKQVGAQNALECLPLVMEPQSA----FYTSPLLVLDFQSLY 1208
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST +GR+
Sbjct: 1209 PSVMIAYNYCYSTFMGRI 1226
>gi|226294625|gb|EEH50045.1| DNA polymerase zeta catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1628
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 253/455 (55%), Gaps = 57/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR--------KVGIILIGQE 295
Y++V+++EIH SR L P+P DE+ IF+ + + D VG+I + +
Sbjct: 794 YMSVMSLEIHVNSRGTLVPNPEEDEISCIFWCVQDGDNDVDDEDDETSGLAVGVIALAEN 853
Query: 296 SELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
L + P ++ ++ ET +E
Sbjct: 854 ESL--------------------------AAKISPTMVAEFDEET-------------SE 874
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVE 409
+L + ++ VR+ DPDIL GYE+ SWGYL+ER Y +L ELSR+ +
Sbjct: 875 LDLLTKLVDVVRRCDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTDSHGRIG 934
Query: 410 KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
K N + +++ GR +INLWR +R E+NL YT EN+ +H+LH+RIP + ++ LT
Sbjct: 935 KENDRWGFNHTSSIRVTGRHMINLWRAMRGELNLLQYTIENVAFHLLHQRIPHYHYQDLT 994
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W++ + + ++ RV +++I+ + I RTSE AR+ G+ F+ V SRGSQF+
Sbjct: 995 KWFQSQRPRDIAKVINYFASRVQLNLKIIDSNELISRTSEQARILGVDFFSVFSRGSQFK 1054
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
VES+M R+++ N + +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS+
Sbjct: 1055 VESLMFRIAKPENLILISPGRKQVGQQNALECLPLVMEPQSDFYTSPVLVLDFQSLYPSI 1114
Query: 590 IIAYNYCFSTCLGR-VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+IAYNYC+STCLGR VE G + G ID L+ + + ISP+G+ +V + I
Sbjct: 1115 MIAYNYCYSTCLGRVVEWRGQNK---LGFIDFRRPAGLLELFKDQINISPNGMIYVKQEI 1171
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK +K +SL+ L
Sbjct: 1172 RKSLLAKMLIEILETRVMVKGGMKAWKDDKSLQRL 1206
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+STCLG
Sbjct: 1072 SPGRKQVGQQNALECLPLVMEPQSD----FYTSPVLVLDFQSLYPSIMIAYNYCYSTCLG 1127
Query: 141 RV 142
RV
Sbjct: 1128 RV 1129
>gi|361125018|gb|EHK97080.1| putative DNA polymerase zeta catalytic subunit [Glarea lozoyensis
74030]
Length = 1121
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 249/456 (54%), Gaps = 54/456 (11%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE-EDR------KVGIILIG 293
E Y++ +++E+H +R P+P DEV+ +F+ L E ED +GI+++
Sbjct: 269 EANYMSTMSLEVHVNTRGNFVPNPEEDEVQCVFWCLQADDSELEDNCETAGSHLGIVVLS 328
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
++ K ++ VS + EL D++I
Sbjct: 329 EDGVAAARIAKQSGLDVVSEDSEL-------------DLMIR------------------ 357
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRN 412
+E VR +DPDIL GYE+ SWGYL+ER + NL E SR+
Sbjct: 358 --------MVEIVRNYDPDILTGYEVHGGSWGYLIERARLKYDYNLCDEFSRMKSQSHGR 409
Query: 413 SSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
+D K + +++ GR +IN+WR +R E+NL YT EN+ +H+LH RIP +W
Sbjct: 410 FGKDNDKWGFNNTSTIRVTGRHMINIWRAMRAELNLLQYTMENVAFHLLHRRIPHFTWAD 469
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
LT W+ + + HY RV + L+EQ + I RTSE ARL G+ F+ V SRGSQ
Sbjct: 470 LTNWYTNDKPRDFAKLISHYTSRVQLDLGLLEQNELIARTSEQARLLGVDFFSVFSRGSQ 529
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
++VES+M R+++ NF+ VSPS KQ A E LPL++EP+S Y P++VLDFQSLYP
Sbjct: 530 YKVESLMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSAFYNSPLLVLDFQSLYP 589
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
SV+IAYNYC+ST LGRV + + G + R L+ L+ ++ ISP+G+ +V
Sbjct: 590 SVMIAYNYCYSTFLGRV--INWRGTNKMGFTEYKRQQRLLELLKDHVNISPNGMMYVKPE 647
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
IR +L KML EIL+TR+MVK MK K ++L+ L
Sbjct: 648 IRKSLLAKMLGEILETRVMVKSGMKIDKDDKALQRL 683
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 533 ESLMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 588
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGRV
Sbjct: 589 PSVMIAYNYCYSTFLGRV 606
>gi|261193585|ref|XP_002623198.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
gi|239588803|gb|EEQ71446.1| polymerase zeta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1699
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 253/449 (56%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++V+++E+H +R +L P+P DE+ I + + +D + GI +
Sbjct: 846 EAQYMSVMSLEVHVNTRGILVPNPEEDEISCIIWCV------QDGETGIDDDDDSGGM-- 897
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
T I E E + I P ++ ++ ET E +L +
Sbjct: 898 --TAGI---IALAENESLAAKI------SPTMVSEFDEET-------------TELDLLT 933
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVEKRNSS 414
++ VRQ DPDIL GYE+ SWGYL+ER Y +L ELSR+ + K N
Sbjct: 934 KLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKFDYDLCDELSRVKTSSHGRIGKENDR 993
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP ++++ LT W+
Sbjct: 994 WGFNHTSSIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHQRIPHYAFQDLTKWFTS 1053
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + +++ RV +++IE + + RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 1054 KKPRDIAKVINYFVSRVQLNLKIIEANELVSRTSEQARILGIDFFSVFSRGSQFKVESLM 1113
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SP Q A E LPL++EP+S YT P++VLDFQSLYPSV+IAYN
Sbjct: 1114 FRIAKPENFILISPGRTQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSVMIAYN 1173
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGRV + + G ID L+ + + I+P+G+ + + IR +L
Sbjct: 1174 YCYSTCLGRVVNWRGQNK--LGFIDFRRPAGILELFKDQVNIAPNGIIYAKQEIRRSLLA 1231
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K + L+ L
Sbjct: 1232 KMLIEILETRVMVKGGMKAEKDDKYLQRL 1260
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPSV+IAYNYC+STCLGRV
Sbjct: 1151 FYTSPLLVLDFQSLYPSVMIAYNYCYSTCLGRV 1183
>gi|239613873|gb|EEQ90860.1| polymerase zeta subunit [Ajellomyces dermatitidis ER-3]
Length = 1699
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 253/449 (56%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++V+++E+H +R +L P+P DE+ I + + +D + GI +
Sbjct: 846 EAQYMSVMSLEVHVNTRGILVPNPEEDEISCIIWCV------QDGETGIDDDDDSGGM-- 897
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
T I E E + I P ++ ++ ET E +L +
Sbjct: 898 --TAGI---IALAENESLAAKI------SPTMVSEFDEET-------------TELDLLT 933
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVEKRNSS 414
++ VRQ DPDIL GYE+ SWGYL+ER Y +L ELSR+ + K N
Sbjct: 934 KLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKFDYDLCDELSRVKTSSHGRIGKENDR 993
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP ++++ LT W+
Sbjct: 994 WGFNHTSSIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHQRIPHYAFQDLTKWFTS 1053
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + +++ RV +++IE + + RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 1054 KKPRDIAKVINYFVSRVQLNLKIIEANELVSRTSEQARILGIDFFSVFSRGSQFKVESLM 1113
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SP Q A E LPL++EP+S YT P++VLDFQSLYPS++IAYN
Sbjct: 1114 FRIAKPENFILISPGRTQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYN 1173
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGRV + + G ID L+ + + I+P+G+ + + IR +L
Sbjct: 1174 YCYSTCLGRVVNWRGQNK--LGFIDFRRPAGILELFKDQVNIAPNGIIYAKQEIRRSLLA 1231
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K + L+ L
Sbjct: 1232 KMLIEILETRVMVKGGMKAEKDDKYLQRL 1260
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPS++IAYNYC+STCLGRV
Sbjct: 1151 FYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRV 1183
>gi|327349945|gb|EGE78802.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1699
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 253/449 (56%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E Y++V+++E+H +R +L P+P DE+ I + + +D + GI +
Sbjct: 846 EAQYMSVMSLEVHVNTRGILVPNPEEDEISCIIWCV------QDGETGIDDDDDSGGM-- 897
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
T I E E + I P ++ ++ ET E +L +
Sbjct: 898 --TAGI---IALAENESLAAKI------SPTMVSEFDEET-------------TELDLLT 933
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVEKRNSS 414
++ VRQ DPDIL GYE+ SWGYL+ER Y +L ELSR+ + K N
Sbjct: 934 KLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKFDYDLCDELSRVKTSSHGRIGKENDR 993
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP ++++ LT W+
Sbjct: 994 WGFNHTSSIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHQRIPHYAFQDLTKWFTS 1053
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + +++ RV +++IE + + RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 1054 KKPRDIAKVINYFVSRVQLNLKIIEANELVSRTSEQARILGIDFFSVFSRGSQFKVESLM 1113
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SP Q A E LPL++EP+S YT P++VLDFQSLYPS++IAYN
Sbjct: 1114 FRIAKPENFILISPGRTQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYN 1173
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+STCLGRV + + G ID L+ + + I+P+G+ + + IR +L
Sbjct: 1174 YCYSTCLGRVVNWRGQNK--LGFIDFRRPAGILELFKDQVNIAPNGIIYAKQEIRRSLLA 1231
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K + L+ L
Sbjct: 1232 KMLIEILETRVMVKGGMKAEKDDKYLQRL 1260
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPS++IAYNYC+STCLGRV
Sbjct: 1151 FYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRV 1183
>gi|451852202|gb|EMD65497.1| hypothetical protein COCSADRAFT_180252 [Cochliobolus sativus ND90Pr]
Length = 1746
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 258/456 (56%), Gaps = 45/456 (9%)
Query: 234 NEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIG 293
N + ++ Y++++++E+H SR L PDPA DE++ +F+ + G
Sbjct: 859 NNTSFKHQSQYMSIMSLEVHVNSRGSLVPDPAEDEIQCVFWSIQ---------------G 903
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
+E+ + + K I S+E + + V +E +
Sbjct: 904 EENVVTDQPRKGILC--FSDEDGIAVRIAKQVS--------------------VEVEYEE 941
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRIT-----E 407
+E +L + ++ VRQ+DPDIL GYE+ SWGYL+ER + NL E+SR+
Sbjct: 942 DELDLINRLVDIVRQFDPDILTGYEVHNSSWGYLIERARMKYEYNLCDEISRMKLESYGR 1001
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
K + +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP +
Sbjct: 1002 FGKEADRWGFTHTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHYQHSD 1061
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
LT W+ + +++++ RV + L++ D + RTSE ARL G F+ V+SRGSQ
Sbjct: 1062 LTTWYTNGKPRDLAKVLDYFITRVQLNLDLLDANDIVPRTSEQARLLGTDFFAVISRGSQ 1121
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
F+VES M R+++ NF+ VSPS KQ A E LPL++EP+S Y+ P++VLDFQSLYP
Sbjct: 1122 FKVESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSAFYSSPVLVLDFQSLYP 1181
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
SV+IAYNYC+STCLGR+ + G +D + L+ ++ ++ I+P+G+ +V
Sbjct: 1182 SVMIAYNYCYSTCLGRI--VSWRGRNKMGFMDFKREPQLLELVKDHINIAPNGMMYVKPE 1239
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+R +L KML EIL+TR+MVK MKE K ++L+ L
Sbjct: 1240 MRKSLLAKMLGEILETRVMVKSGMKEDKDDKTLQKL 1275
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES++ R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1125 ESTMFRIAKPENFILVSPSRKQVGRQNALECLPLVMEPQSA----FYSSPVLVLDFQSLY 1180
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGR+
Sbjct: 1181 PSVMIAYNYCYSTCLGRI 1198
>gi|392571499|gb|EIW64671.1| hypothetical protein TRAVEDRAFT_42080 [Trametes versicolor FP-101664
SS1]
Length = 1667
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 247/445 (55%), Gaps = 41/445 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E +TVLAVEI A S+ PDP DE+ AIFY L+T E + G
Sbjct: 812 ERQNMTVLAVEIFAPSKGDHVPDPDQDEMAAIFYALHTSDHTEGGGAFMCDYG------- 864
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
M V +E +L + + N++ FV +E +L +
Sbjct: 865 -------MIAVESE-QLNARRLRNIKA----------------------EFVESELDLLN 894
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE-KRNSSRDEVK 419
I+ V + DPDI+ G+E++ SWGYL RG GL++ +++SR S R ++
Sbjct: 895 RLIDIVLELDPDIVSGWEVQAGSWGYLTARGRSYGLDVGEQISRAPARHMGGGSDRWGMQ 954
Query: 420 NTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
T ++ GR V+N+WR++R E YTFEN+++ +L R P +S + +T W+
Sbjct: 955 TTSTFKVTGRHVLNVWRIMRSEHTFSIYTFENVVFQILRRRTPWYSPQTVTSWFNSPVPE 1014
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ + ++ R ++ +++ + + + +E AR+FG+ F+ VLSRGSQF+VES M R++
Sbjct: 1015 HAHRVLRYFAQRTIMVLEILDVAEVVTKNAEFARVFGVDFFSVLSRGSQFKVESFMFRIA 1074
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ NFV +SPS + A E +PLI+EP S Y P++VLDFQSLYPS++IAYNYC+S
Sbjct: 1075 KPENFVLISPSKQDVGKQNAAECIPLIMEPLSAFYNSPLVVLDFQSLYPSIMIAYNYCYS 1134
Query: 599 TCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
TCLGRV F FG DL L L + ++P+G+ +V +++R G+L +ML
Sbjct: 1135 TCLGRVTDF--KGQFKFGVTDLRQPAGMLATLHDYINVAPNGMMYVKQTVRRGLLGRMLT 1192
Query: 659 EILDTRLMVKQSMKEYKFSESLRNL 683
E+LDTR+MVKQ+MK K ++L +
Sbjct: 1193 ELLDTRVMVKQAMKGAKDDKALHRI 1217
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRE 160
Y P++VLDFQSLYPS++IAYNYC+STCLGRV F FG R+
Sbjct: 1108 FYNSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVTDF--KGQFKFGVTDLRQ 1156
>gi|295663052|ref|XP_002792079.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279254|gb|EEH34820.1| polymerase zeta subunit [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1675
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 252/455 (55%), Gaps = 57/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR--------KVGIILIGQE 295
Y++V+++EIH SR L P+P DE+ IF+ + + D VG+I + +
Sbjct: 844 YMSVMSLEIHVNSRGTLVPNPEEDEISCIFWCVQDGDNDADDEDDETSGLAVGVIALAEN 903
Query: 296 SELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
L + P ++ ++ ET +E
Sbjct: 904 ESL--------------------------AAKISPTMVAEFDEET-------------SE 924
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVE 409
+L + ++ VR+ DPDIL GYE+ SWGYL+ER Y +L ELSR+ +
Sbjct: 925 LDLLTKLVDVVRRCDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTDSHGRIG 984
Query: 410 KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
K N + +++ GR +INLWR +R E+NL YT EN+ +H+LH+RIP + ++ LT
Sbjct: 985 KENDRWGFNHTSSIRVTGRHMINLWRAMRGELNLLQYTMENVAFHLLHQRIPHYHYQDLT 1044
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W++ + + ++ RV +++I+ + I RTSE AR+ G+ F+ V SRGSQF+
Sbjct: 1045 KWFQSQRPRDIAKVINYFASRVQLNLKIIDSNELISRTSEQARILGVDFFSVFSRGSQFK 1104
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
VES+M R+++ N + +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS+
Sbjct: 1105 VESLMFRIAKPENLILISPGRKQVGQQNALECLPLVMEPQSDFYTSPVLVLDFQSLYPSI 1164
Query: 590 IIAYNYCFSTCLGR-VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+IAYNYC+STCLGR VE G + G ID L+ + + ISP+G+ +V + I
Sbjct: 1165 MIAYNYCYSTCLGRVVEWRGQNK---LGFIDFRRPAGLLELFKDQINISPNGMIYVKQDI 1221
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK +K + L+ L
Sbjct: 1222 RKSLLAKMLIEILETRVMVKGGMKAWKADKHLQRL 1256
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+STCLG
Sbjct: 1122 SPGRKQVGQQNALECLPLVMEPQSD----FYTSPVLVLDFQSLYPSIMIAYNYCYSTCLG 1177
Query: 141 RV 142
RV
Sbjct: 1178 RV 1179
>gi|389751639|gb|EIM92712.1| hypothetical protein STEHIDRAFT_144019 [Stereum hirsutum FP-91666
SS1]
Length = 1703
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 253/449 (56%), Gaps = 54/449 (12%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTC--PPEEDRKVGIILIGQESEL 298
E +TV ++E+ A SR L PDP D+V +FY + GI+
Sbjct: 860 ERQSITVFSLEVFAPSRGGLLPDPDEDQVALVFYAFQDSNDTTSSQYRTGIVATRHAHTD 919
Query: 299 PEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKEL 358
P R + Q++ V +E +L ++ + DI++
Sbjct: 920 PR-RMRDFQLDVVDDELDLLNSLV--------DIVL------------------------ 946
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV 418
+ DPD+++G+EI+ SWGYL RG G ++ + LSR ++ ++ E
Sbjct: 947 ---------ELDPDVIVGWEIQNASWGYLKARGNHYGFDIEEHLSRAPPLQSMHAQGSEQ 997
Query: 419 ----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
+ L + GR +N+WR++R E++L YTFEN ++HVL +R+P++ LT W+
Sbjct: 998 WGMRTTSTLHIVGRHALNVWRIMRVELSLGMYTFENTVFHVLRQRVPMYKAGTLTEWYNS 1057
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
EH +H+ V ++ R +++++++ + I +T+E AR+FG+ F +VL+RGSQF+VE+
Sbjct: 1058 EHPSHMA--TLVRYFSSRTLMVLQILDEAETITKTAEFARVFGVDFMDVLNRGSQFKVEA 1115
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
MLR+++ +FV +SPS A E +PLI+EP+S Y+ P++VLDFQSLYPS++IA
Sbjct: 1116 FMLRIAKPESFVLLSPSKADVGKQNAAECMPLIMEPQSAFYSSPVVVLDFQSLYPSIMIA 1175
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
YNYC+STCLGRV + FG +L L LQ + ++P+G+ +V +R G+
Sbjct: 1176 YNYCYSTCLGRVTDFKGQNK--FGVTELERPAGLLDTLQDYINVAPNGMMYVKPQVRKGL 1233
Query: 653 LPKMLQEILDTRLMVKQSMKEYKFSESLR 681
L +ML E+L+TR+MVKQ+MK K +++LR
Sbjct: 1234 LGRMLTELLETRVMVKQAMKGVKDNKTLR 1262
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y+ P++VLDFQSLYPS++IAYNYC+STCLGRV + F
Sbjct: 1155 FYSSPVVVLDFQSLYPSIMIAYNYCYSTCLGRVTDFKGQNKF 1196
>gi|453079938|gb|EMF07990.1| hypothetical protein SEPMUDRAFT_167090 [Mycosphaerella populorum
SO2202]
Length = 1725
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 252/450 (56%), Gaps = 46/450 (10%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGI-ILIGQESELP 299
E Y++ +++E+H SRA L PDP DEV + + + ++ K+GI +LI ++ ELP
Sbjct: 847 ETGYMSTMSLEVHVNSRADLAPDPERDEVNMVVWCITDEQMDDSPKLGILVLIEEDEELP 906
Query: 300 EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
+R+ ++G ++ S NE +L
Sbjct: 907 A-----------------------KIRK-----MVGDHVQIDS---------EDNELDLI 929
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDE- 417
+ ++ VR++D DIL GYE+ SWGYL+ER + NL E SR+ K RD
Sbjct: 930 NRMVDIVREYDIDILTGYEVHNNSWGYLIERARLHYEFNLPDEFSRMKSHSKGRFGRDAD 989
Query: 418 ----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+ + + GR IN+WR +R E+NL YT EN+++H+LH RIP +++ LT W++
Sbjct: 990 RWGFTHTSTVSITGRHTINIWRAMRSELNLLQYTMENVVFHLLHRRIPHYTYATLTRWYK 1049
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
+++ + R + +++ + I RTSE ARL G+ F+ V SRGSQF+VES+
Sbjct: 1050 SDRPRDLAKVLDYLVTRTKLDLEILDANELIPRTSEQARLLGVDFFSVFSRGSQFKVESL 1109
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
M R+++ +FV VSPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAY
Sbjct: 1110 MFRIAKPESFVLVSPSRKQVGSQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAY 1169
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYC+STCLGRV ++ F + + L K L ++P+G+ +V +R +L
Sbjct: 1170 NYCYSTCLGRVTKWRGTNKMGFADFKRHPGLLELTK--DKLNVAPNGMMYVKPELRKSLL 1227
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK + ++L+ L
Sbjct: 1228 AKMLGEILETRVMVKSGMKVDRDDKTLQQL 1257
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK ++++ + M P S+ Y+ P++VLDFQSLYPSV+IAYNYC+STCLG
Sbjct: 1123 SPSRKQVGSQNALECLPLVMEPQSA----FYSSPLLVLDFQSLYPSVMIAYNYCYSTCLG 1178
Query: 141 RV 142
RV
Sbjct: 1179 RV 1180
>gi|380491086|emb|CCF35569.1| DNA polymerase family B, partial [Colletotrichum higginsianum]
Length = 1706
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 252/476 (52%), Gaps = 43/476 (9%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP ++ + H E Y++ +A+E+H +R P+P DEV+ IF+
Sbjct: 853 IDGPTPKNKHGFKYSPKKKSTGVKH-EAQYMSTMALEVHVNTRGKFVPNPDEDEVQCIFW 911
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + S+ + I V PD +
Sbjct: 912 SIKAD-----------------------------STTSSSQATAGGMIAGVVVLSPDGGL 942
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV- 393
+ + ++E ++E +L +E VR DPDIL GYE+ SWGYL+ER V
Sbjct: 943 AARMRRYIPAEVVEE---ASELDLMVRMVEVVRSHDPDILTGYEVHGSSWGYLIERARVK 999
Query: 394 LGLNLNQELSRIT-----EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
+L E SR+ + K N + +++ GR +IN+WR +R E+NL YT
Sbjct: 1000 YDYDLCDEFSRMKSNSHGRIGKENDRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYTM 1059
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
EN+ +HVLH RIP ++W+ LT W+ + +YL R I ++E + I RTS
Sbjct: 1060 ENVAWHVLHRRIPHYTWQTLTEWYNSSRQRDLDKLLRYYLARTRTDIHILESNELIPRTS 1119
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP
Sbjct: 1120 EQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEP 1179
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR-VEHLGVSDSFPFGCIDLNVSIRSL 627
+S Y P++VLDFQSLYPSV+IAYN C+ST LGR V G++ G + R L
Sbjct: 1180 QSDFYNSPLLVLDFQSLYPSVMIAYNLCYSTFLGRIVSWRGMNK---MGFTEYQRHRRLL 1236
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ L+ + I+P+G+ FV IR +L KML EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1237 ELLKDYINITPNGMMFVRPEIRKSLLAKMLGEILETRVMVKAGMKQDKDDKTLQKL 1292
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S Y P++VLDFQSLY
Sbjct: 1142 ESIMFRIAKPENFMLVSPSRKQVGGQNALECLPLVMEPQSD----FYNSPLLVLDFQSLY 1197
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYN C+ST LGR+
Sbjct: 1198 PSVMIAYNLCYSTFLGRI 1215
>gi|225685289|gb|EEH23573.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb03]
Length = 1707
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 252/455 (55%), Gaps = 57/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR--------KVGIILIGQE 295
Y++V+++EIH R L P+P DE+ IF+ + + D VG+I + +
Sbjct: 860 YMSVMSLEIHVNCRGTLVPNPEEDEISCIFWCVQDGDNDADDEDDETSGLAVGVIALAEN 919
Query: 296 SELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
L + P ++ ++ ET +E
Sbjct: 920 ESL--------------------------AAKISPTMVAEFDEET-------------SE 940
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EVE 409
+L + ++ VR+ DPDIL GYE+ SWGYL+ER Y +L ELSR+ +
Sbjct: 941 LDLLTKLVDVVRRCDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTDSHGRIG 1000
Query: 410 KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
K N + +++ GR +INLWR +R E+NL YT EN+ +H+LH+RIP + ++ LT
Sbjct: 1001 KENDRWGFNHTSSIRVTGRHMINLWRAMRGELNLLQYTIENVAFHLLHQRIPHYHYQDLT 1060
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W++ + + ++ RV +++I+ + I RTSE AR+ G+ F+ V SRGSQF+
Sbjct: 1061 KWFQSQRPRDIAKVINYFASRVQLNLKIIDSNELISRTSEQARILGVDFFSVFSRGSQFK 1120
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
VES+M R+++ N + +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS+
Sbjct: 1121 VESLMFRIAKPENLILISPGRKQVGQQNALECLPLVMEPQSDFYTSPVLVLDFQSLYPSI 1180
Query: 590 IIAYNYCFSTCLGR-VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+IAYNYC+STCLGR VE G + G ID L+ + + ISP+G+ +V + I
Sbjct: 1181 MIAYNYCYSTCLGRVVEWRGQNK---LGFIDFRRPAGLLELFKDQINISPNGMIYVKQEI 1237
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK +K +SL+ L
Sbjct: 1238 RKSLLAKMLIEILETRVMVKGGMKAWKDDKSLQRL 1272
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+STCLG
Sbjct: 1138 SPGRKQVGQQNALECLPLVMEPQSD----FYTSPVLVLDFQSLYPSIMIAYNYCYSTCLG 1193
Query: 141 RV 142
RV
Sbjct: 1194 RV 1195
>gi|388579508|gb|EIM19831.1| hypothetical protein WALSEDRAFT_58541 [Wallemia sebi CBS 633.66]
Length = 1504
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 270/490 (55%), Gaps = 61/490 (12%)
Query: 198 IRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISR 257
I Q+E P R + +DA T ++ + +++ + + T++ VE+ A +
Sbjct: 650 IHTQIEGPPSR--QKFGLDASTASGEKNH---IPREHDIQTQI-----TMMIVEVFAKNI 699
Query: 258 ALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
P+P ++ V+AIF+ + +++ + G++++ E++ + M NE +L
Sbjct: 700 GNKVPNPEHNPVEAIFWVFQSS--DDEVESGMVVVEGETKY---KLNETNMEIAINEADL 754
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
T I+ V+++DPDIL G++ E SWGYL++R +
Sbjct: 755 IFTLIDKVQEFDPDILAGWDTELGSWGYLVDRARIE------------------------ 790
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRD----EVKNTQLQMPGRIVINL 433
+GL L++E SR+ RN + E+K T PGR V N+
Sbjct: 791 ----------------IGLELSEETSRVKSRTMRNITGGQKWAEMKTTTFTSPGRHVFNV 834
Query: 434 WRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTG 493
WRL R E++L TFE++ + VL +R+P ++ + LT WW +E + +RV
Sbjct: 835 WRLARSELSLPQTTFEHVSHSVLKKRLPKYTSETLTRWWTSGNVSSYARVLELFSLRVKM 894
Query: 494 IIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQR 553
I ++ ++ I +T+E AR G+ FY V++RGSQF+VE++M R+++ N+V +SPS Q
Sbjct: 895 IGDILNSMETITKTAEFARTIGVDFYSVITRGSQFKVEALMFRIAKPENYVLISPSRNQV 954
Query: 554 AHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 613
+ +A E+LPL++EP+S Y DPIIVLDFQSLYPS+++AYNYC+STCLGRV+ +
Sbjct: 955 SGQQAAEALPLVMEPQSAFYKDPIIVLDFQSLYPSIMLAYNYCYSTCLGRVKPY--EGHY 1012
Query: 614 PFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G + S + L L+ ++ +P+G+ +V +R +L KML E+LDTR+M+KQSM+E
Sbjct: 1013 KLGITEHTTSSKVLDSLKDDINFAPNGMMYVKPHVRKSLLSKMLAELLDTRIMIKQSMQE 1072
Query: 674 YKFSESLRNL 683
+ + LR L
Sbjct: 1073 NREDKYLRKL 1082
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+R S + + ++ M P S+ Y DPIIVLDFQSLYPS+++AYNYC+STCLG
Sbjct: 948 SPSRNQVSGQQAAEALPLVMEPQSA----FYKDPIIVLDFQSLYPSIMLAYNYCYSTCLG 1003
Query: 141 RVE 143
RV+
Sbjct: 1004 RVK 1006
>gi|71000489|ref|XP_754928.1| DNA polymerase zeta catalytic subunit [Aspergillus fumigatus Af293]
gi|66852565|gb|EAL92890.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus Af293]
Length = 1656
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 255/471 (54%), Gaps = 41/471 (8%)
Query: 220 PDTTGDYQMGLDNLNEVTS-HVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT 278
P DY + TS + Y++ +++E+H +R +L P+P DE+ IF+
Sbjct: 787 PTQKNDYGFKYSQKGKSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEEDEISCIFW---- 842
Query: 279 CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEI 338
C +D+ V + LP V I S +
Sbjct: 843 CIQSDDQDVDV-----NGNLPGVHVGMIAQGSGDGPTSKLSKALR--------------- 882
Query: 339 ETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLN 397
+E E +L + ++ VR DPDI+ GYE+ SWGYL+ER +
Sbjct: 883 --------IELEHEPTELDLINRLVDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFD 934
Query: 398 LNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
+ ELSR+ +D + + +++ GR +IN+WR +R E+NL YT EN++
Sbjct: 935 ICDELSRVRSQAHGRFDKDADRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQYTMENVV 994
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
+H+LH RIP +S++ LT W++ V++Y+ R+ + ++E + I RTSE AR
Sbjct: 995 FHLLHRRIPHYSYRDLTAWYQSGKPRDVLKVVQYYVSRIQMNLEILESNELIPRTSEQAR 1054
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
L GI F+ V SRGSQF+VES+M R+++ N++ VSPS KQ A E LPL++EP+S
Sbjct: 1055 LLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLVMEPQSDF 1114
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
YT P++VLDFQSLYPS++IAYNYC+ST LGRV HL + G +D R L+ L+
Sbjct: 1115 YTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRV-HLWRGRN-KMGFMDYKRQPRVLELLKD 1172
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ I+P+G+ +V +R +L +ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1173 KVNIAPNGMMYVKPEVRQSLLARMLAEILETRVMVKAGMKMDKDDKALQRL 1223
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 10/81 (12%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1073 ESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1128
Query: 125 PSVIIAYNYCFSTCLGRVEHL 145
PS++IAYNYC+ST LGRV HL
Sbjct: 1129 PSIMIAYNYCYSTFLGRV-HL 1148
>gi|134079611|emb|CAK40828.1| unnamed protein product [Aspergillus niger]
Length = 1668
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 272/518 (52%), Gaps = 63/518 (12%)
Query: 173 EAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDN 232
+A+ P K Q+ K+ + Q+E P ++ DY
Sbjct: 774 KADAAQPQARKRKQV-------KANVLSQIEGPTQK---------------NDYGFKYSQ 811
Query: 233 LNEVTS-HVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIIL 291
+ TS + Y++++++E+H +R +L P+P DE+ +F+ L + +ED +
Sbjct: 812 KGKSTSVEHQTQYMSIMSLEVHVNTRGVLSPNPEEDEITCVFWCLQS--EDEDLDANGTV 869
Query: 292 IGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G + + +S E+ R PDI + F W +
Sbjct: 870 PG------------VHVGMISQ--------AEDDR---PDIKASKALR-FDWEH------ 899
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEK 410
+ E +L + ++ VR DPDI+ GYE+ SWGYL+ER ++ ELSR+
Sbjct: 900 ETTELDLINRVVDIVRWHDPDIITGYEVHNSSWGYLIERARKKYDFDICDELSRVKSQAH 959
Query: 411 RNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D + + +++ GR +IN+WR +R E+NL YT EN+ +H+LH R+P +S+
Sbjct: 960 GRFGKDADRWGFNHTSSIRVTGRHMINIWRAMRGELNLLQYTQENVAFHLLHRRVPHYSF 1019
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
+ LT W+ VE+++ RV + ++E + I RTSE ARL GI F+ V SRG
Sbjct: 1020 QDLTEWYRSGKPRNILKVVEYFVSRVQMDLEILESNELIPRTSEQARLLGIDFFSVFSRG 1079
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VES+M R+++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSL
Sbjct: 1080 SQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLVVLDFQSL 1139
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YPS++IAYNYC+ST LGR + G D R L+ LQ + I+P+G+ +
Sbjct: 1140 YPSIMIAYNYCYSTFLGRAHQWRGRNK--MGFTDYKRQPRMLELLQDKINIAPNGMMYAK 1197
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+R +L +ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1198 PEVRKSLLARMLAEILETRVMVKNGMKIDKDDKALQRL 1235
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1085 ESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLVVLDFQSLY 1140
Query: 125 PSVIIAYNYCFSTCLGRVEH 144
PS++IAYNYC+ST LGR
Sbjct: 1141 PSIMIAYNYCYSTFLGRAHQ 1160
>gi|317032425|ref|XP_001394913.2| DNA polymerase zeta catalytic subunit [Aspergillus niger CBS 513.88]
gi|350631625|gb|EHA19996.1| hypothetical protein ASPNIDRAFT_179788 [Aspergillus niger ATCC 1015]
Length = 1668
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 272/518 (52%), Gaps = 63/518 (12%)
Query: 173 EAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDN 232
+A+ P K Q+ K+ + Q+E P ++ DY
Sbjct: 774 KADAAQPQARKRKQV-------KANVLSQIEGPTQK---------------NDYGFKYSQ 811
Query: 233 LNEVTS-HVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIIL 291
+ TS + Y++++++E+H +R +L P+P DE+ +F+ L + +ED +
Sbjct: 812 KGKSTSVEHQTQYMSIMSLEVHVNTRGVLSPNPEEDEITCVFWCLQS--EDEDLDANGTV 869
Query: 292 IGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G + + +S E+ R PDI + F W +
Sbjct: 870 PG------------VHVGMISQ--------AEDDR---PDIKASKALR-FDWEH------ 899
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEK 410
+ E +L + ++ VR DPDI+ GYE+ SWGYL+ER ++ ELSR+
Sbjct: 900 ETTELDLINRVVDIVRWHDPDIITGYEVHNSSWGYLIERARKKYDFDICDELSRVKSQAH 959
Query: 411 RNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D + + +++ GR +IN+WR +R E+NL YT EN+ +H+LH R+P +S+
Sbjct: 960 GRFGKDADRWGFNHTSSIRVTGRHMINIWRAMRGELNLLQYTQENVAFHLLHRRVPHYSF 1019
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
+ LT W+ VE+++ RV + ++E + I RTSE ARL GI F+ V SRG
Sbjct: 1020 QDLTEWYRSGKPRNILKVVEYFVSRVQMDLEILESNELIPRTSEQARLLGIDFFSVFSRG 1079
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VES+M R+++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSL
Sbjct: 1080 SQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLVVLDFQSL 1139
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YPS++IAYNYC+ST LGR + G D R L+ LQ + I+P+G+ +
Sbjct: 1140 YPSIMIAYNYCYSTFLGRAHQWRGRNK--MGFTDYKRQPRMLELLQDKINIAPNGMMYAK 1197
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+R +L +ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1198 PEVRKSLLARMLAEILETRVMVKNGMKIDKDDKALQRL 1235
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1085 ESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLVVLDFQSLY 1140
Query: 125 PSVIIAYNYCFSTCLGRVEH 144
PS++IAYNYC+ST LGR
Sbjct: 1141 PSIMIAYNYCYSTFLGRAHQ 1160
>gi|358055684|dbj|GAA98029.1| hypothetical protein E5Q_04709 [Mixia osmundae IAM 14324]
Length = 1838
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 243/438 (55%), Gaps = 43/438 (9%)
Query: 260 LKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFS 319
L+PDP +D ++A+ Y L T P I + LP I M V
Sbjct: 1030 LRPDPEHDSIEALCYCLQTEDPS---------ILRNGRLPSTH---IGMIVVEQ------ 1071
Query: 320 TFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEI 379
G + +G ++ V +E L +FI+ V+ WDP+IL G+E+
Sbjct: 1072 --------------AGIDFHRLGFGDVV-IDVVEDEGALIDLFIDKVQHWDPEILAGFEV 1116
Query: 380 ETLSWGYLLERGYVL-GLNLNQELSRI-TEVEKRNSSRDEV----KNTQLQMPGRIVINL 433
SWGYL++RG V GL+L + R+ T+ RN +++ + L+ GR V+ +
Sbjct: 1117 HKSSWGYLVDRGNVAHGLDLVKIFGRVDTQSTGRNRGKEDAWGYNHTSSLRFTGRHVLCI 1176
Query: 434 WRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTG 493
WR+LR E+ L YT EN+ +HVL ER P ++ + LT W+ + + ++++L R +
Sbjct: 1177 WRILRGELALTQYTLENLTFHVLQERTPHYTHRTLTRWYTDDSPAHTARVLQYWLRRASI 1236
Query: 494 IIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQR 553
I L+++ + I R +E AR+FG+ F VL+RGSQF+VES M R+++ +F+ +SP Q
Sbjct: 1237 DIELLDEAEIISRNAEFARVFGVDFMSVLTRGSQFKVESFMFRVAKPESFLLLSPDRVQV 1296
Query: 554 AHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 613
A E PLI+EP+S YTDP++VLDFQSLYPS +IAYNYC+STCLGR + F
Sbjct: 1297 GKQNAAECQPLIMEPQSAFYTDPVLVLDFQSLYPSCMIAYNYCYSTCLGRAGLFKNTTKF 1356
Query: 614 PFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+D + SL LQ L +SP+G FV +R +L KML EILDTR M+K+SMK
Sbjct: 1357 GTTTLDHPAGLLSL--LQDELIVSPNGFVFVKPHVRKSLLSKMLSEILDTRFMIKKSMKL 1414
Query: 674 YKFSESLRNLTMLNSMLL 691
K ++L M+N+ L
Sbjct: 1415 VKDDKAL--TKMMNARQL 1430
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YTDP++VLDFQSLYPS +IAYNYC+STCLGR
Sbjct: 1315 FYTDPVLVLDFQSLYPSCMIAYNYCYSTCLGRA 1347
>gi|343428638|emb|CBQ72168.1| probable catalytic subunit of DNA polymerase zeta UPR-1 [Sporisorium
reilianum SRZ2]
Length = 1677
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 249/456 (54%), Gaps = 55/456 (12%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY-------YLYTCPPEEDRKVGIILIG 293
+ ++T LAVE+ +R L PDPA+D V+AI Y +L D + G+I++
Sbjct: 786 DKQHVTTLAVEVLTTTRGTLFPDPAFDAVQAIIYSFQNEDEHLQDTGSRPDLRTGLIIVA 845
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
E +V + ++ ++ E V
Sbjct: 846 PE----DVNVDRLGLSHLALE------------------------------------VVE 865
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSR--ITEVEK 410
+E ELF+ I+ VR +DP+I++G+EI + SWGY++ER +L ++ R + +
Sbjct: 866 DELELFNTLIDLVRAFDPEIIVGWEIHSSSWGYIIERASKEYDFDLVPQIGRAIVHNTGR 925
Query: 411 RNSSRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
D TQ L++ GR +NLWRL++ E+ L YTFEN+ YH+LH RIP S +
Sbjct: 926 AGGKSDNYAYTQSSALRITGRHTLNLWRLMKGELTLNLYTFENVCYHLLHRRIPKFSHQT 985
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
LT W+ + +Y+ V + +I + +F+ RT+E AR++GI F+ V+SRGSQ
Sbjct: 986 LTHWFTSGRAELVGKALLYYVDMVELELEIISESEFVLRTAEFARIYGIDFFSVISRGSQ 1045
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
F+VESIMLR+++ NFV +SPS Q A E LPLI+EP+S Y ++VLDFQSLYP
Sbjct: 1046 FKVESIMLRIAKPENFVLISPSRAQVGKQNAAECLPLIMEPQSAFYKGLLVVLDFQSLYP 1105
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
S++IAYN C+STCLGRV G + FG + L L ++ IS +G+ FV
Sbjct: 1106 SIMIAYNLCYSTCLGRV--AGFKGTSKFGVTEYAPPKGLLSLLSDHVNISSNGLLFVKPD 1163
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+R +L KML EILDTR+MVK SMK K +S + +
Sbjct: 1164 VRKSLLAKMLSEILDTRVMVKGSMKGTKADKSFQRI 1199
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKD 169
Y ++VLDFQSLYPS++IAYN C+STCLGRV G + FG + +PP
Sbjct: 1090 FYKGLLVVLDFQSLYPSIMIAYNLCYSTCLGRV--AGFKGTSKFGV-----TEYAPPK-- 1140
Query: 170 SIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQL 202
+ H + S + + PD+ KS + K L
Sbjct: 1141 GLLSLLSDHVNISSNGLLFVKPDVRKSLLAKML 1173
>gi|116193749|ref|XP_001222687.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
gi|88182505|gb|EAQ89973.1| hypothetical protein CHGG_06592 [Chaetomium globosum CBS 148.51]
Length = 1755
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 254/471 (53%), Gaps = 41/471 (8%)
Query: 219 TPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT 278
TP T ++ + H E Y++ +++EIH SR L P+P DEV+ IF+ L
Sbjct: 847 TPKNTHGFKYSQKQKSTSVQH-EAQYMSTMSLEIHVNSRGKLVPNPEEDEVQCIFWCL-- 903
Query: 279 CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEI 338
R L G +S+ I + D L+ ++
Sbjct: 904 ------RSDEQCLFGSQSD---------------------DNTITGIVVLSGDGLLAKQV 936
Query: 339 ETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLN 397
+ + E ++E +L +E VR DPDIL GYE+ SWGYL+ER + +
Sbjct: 937 RNQTSCQVDEE---ASELDLLVKMVEIVRAHDPDILTGYEVHGSSWGYLVERAMHKYEFD 993
Query: 398 LNQELSRIT-----EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
L E SR+ + K + + L + GR +IN+WR +R E+NL Y+ EN++
Sbjct: 994 LCNEFSRMKSESFGKFGKNADAWGSKTTSNLHVTGRHIINVWRAMRGELNLLQYSMENVV 1053
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
+H+LH RIP +SW+ LT W+ + +YL R I +IE + I RTSE AR
Sbjct: 1054 WHLLHRRIPHYSWQTLTDWYLSGRPRDLSKVLRYYLRRTRLDIEIIEANELIPRTSEQAR 1113
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
L G+ F+ V SRGSQF+VESIM R+++ NF+ VSP+ KQ A E LPL++EP+S
Sbjct: 1114 LLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPNRKQVGSQNALECLPLVMEPQSAF 1173
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y P++VLDFQSLYPSV+IAYNYC+STCLGRV + + G + L+ L+
Sbjct: 1174 YPSPLLVLDFQSLYPSVMIAYNYCYSTCLGRV--VSWRGTNKMGFTEYRRREGLLRLLKD 1231
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
++ I+P+G+ + IR +L KML EIL+TR+MVK MKE K ++L+ L
Sbjct: 1232 HINIAPNGMMYTKPEIRKSLLAKMLTEILETRVMVKSGMKEDKDDKTLQKL 1282
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP RK ++++ + M P S+ Y P++VLDFQSLY
Sbjct: 1132 ESIMFRIAKPENFLLVSPNRKQVGSQNALECLPLVMEPQSA----FYPSPLLVLDFQSLY 1187
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+STCLGRV
Sbjct: 1188 PSVMIAYNYCYSTCLGRV 1205
>gi|340519636|gb|EGR49874.1| zeta catalytic subunit of dna polymerase [Trichoderma reesei QM6a]
Length = 1596
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 260/477 (54%), Gaps = 44/477 (9%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP T +++ + H E Y++ +++EIH +R P+P DE++ IF+
Sbjct: 727 IDGPTPRTKHNFKYSQRQPSSAIPH-EAQYMSTMSLEIHVNTRGNFVPNPEEDEIQCIFW 785
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ ++D S PE+ V + + S E +R PD
Sbjct: 786 HW-----KDDGATS-------SATPEMSGSSGSGVLV---QSVDSILAEQIRSVVPD--- 827
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV- 393
E S+E +L + +E VR +DPDIL GYE+ SWGYL+ER +
Sbjct: 828 -------------EVAEESSELDLLNRMVEIVRFYDPDILTGYEVHGSSWGYLIERARLK 874
Query: 394 LGLNLNQELSRIT-----EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
+L E SR+ K N + +++ GR +IN+WR +R EVNL YT
Sbjct: 875 YDYDLCSEFSRMKTQSNGRFGKENDQWGFNTTSSIRVTGRHMINIWRAMRGEVNLLQYTM 934
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT--VEHYLIRVTGIIRLIEQLDFIGR 506
EN+++H+LH RIP + W+ LT W HR+ + + + +Y R + ++E + I R
Sbjct: 935 ENVVWHLLHRRIPHYPWRCLTSW--HRSGKPQDVVRLLRYYRTRTRLDLEILESNELISR 992
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++
Sbjct: 993 TSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVM 1052
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S Y+ P++VLDFQSLYPS++IAYNYC+ST LGR+ F + S
Sbjct: 1053 EPQSAFYSSPLVVLDFQSLYPSIMIAYNYCYSTFLGRITDWRGKSKMGFAEYRRQDGLLS 1112
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L +++ ++P+G+ +V +R +L KML EIL+TR+MVK MK+ + ++L+ L
Sbjct: 1113 L--LAKHINVAPNGMMYVKAEVRKSLLAKMLTEILETRIMVKSGMKQDRDDKTLQRL 1167
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1017 ESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVMEPQSA----FYSSPLVVLDFQSLY 1072
Query: 125 PSVIIAYNYCFSTCLGRV 142
PS++IAYNYC+ST LGR+
Sbjct: 1073 PSIMIAYNYCYSTFLGRI 1090
>gi|302658851|ref|XP_003021124.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
gi|291185005|gb|EFE40506.1| hypothetical protein TRV_04773 [Trichophyton verrucosum HKI 0517]
Length = 1594
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 260/477 (54%), Gaps = 54/477 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID T ++ + H NY ++V+++E+H +R L P+P DEV +F+
Sbjct: 775 IDTSTQHNKHGFKYSQRTKSSAVQHEANY-MSVMSLEVHVNTRGTLAPNPEEDEVACVFW 833
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + EE R G++++ + L + KP E F E++ + D
Sbjct: 834 SVIS--EEEGRHRGVVVLSETYGL-SSKLKP----------EPGIEFQEDMSELD----- 875
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER---G 391
L + + VR +DPDIL GYE+ SWGYL+ER G
Sbjct: 876 -----------------------LMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKG 912
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
Y +L E SR+ SR+ + + +++ GR +IN+WR +R E+NL Y
Sbjct: 913 Y--DYDLCDEFSRVKSQSHGRISRETDRWGFNHTSTIRVTGRHMINIWRAMRGELNLLQY 970
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
T EN+ +H+LH+RIP + ++ LT W++ T++++ RV + +++ + I R
Sbjct: 971 TMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISR 1030
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE AR+ GI FY V SRGSQF+VES+M R+++ NF+ +SPS KQ A E LPL++
Sbjct: 1031 TSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQNALECLPLVM 1090
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ + + G D
Sbjct: 1091 EPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNK--MGITDYEREPGL 1148
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L+ L+ + I+P+G+ +V + +R +L KML EIL+TR+MVK MKE K L+ L
Sbjct: 1149 LRLLKDKINIAPNGIIYVKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQRL 1205
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 13/75 (17%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+ST LG
Sbjct: 1071 SPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLYPSIMIAYNYCYSTNLG 1126
Query: 141 RV------EHLGVSD 149
R+ +G++D
Sbjct: 1127 RIVNWRGRNKMGITD 1141
>gi|46129445|ref|XP_389074.1| hypothetical protein FG08898.1 [Gibberella zeae PH-1]
Length = 1681
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/489 (35%), Positives = 259/489 (52%), Gaps = 56/489 (11%)
Query: 208 RICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD 267
R C S I+ TP ++ H E Y++ +++E+H +R P+P D
Sbjct: 808 RNCHS-QIEGPTPKNRHGFKYTPGKKATSVKH-EVQYMSTMSLEVHVNTRGNFVPNPEED 865
Query: 268 EVKAIFYYLYTCPPEEDRK-------VGIILIGQESELPEVRTKPIQMNFVSNEKELFST 320
EV+ F+ + + D + GI+L+ ++E T+ +Q
Sbjct: 866 EVQCAFWAIKSDGTSTDSQSSAGTVQTGILLLSNDAEF----TQRVQ------------- 908
Query: 321 FIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIE 380
RQ DI IE S E +L +E VR DPDIL GYE+
Sbjct: 909 -----RQTSADI-----IEETS------------ELDLMVRMVEIVRNHDPDILTGYEVH 946
Query: 381 TLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLW 434
SWGYL+ER + NL E SR+ +D + + +++ GR ++N+W
Sbjct: 947 GSSWGYLIERARLKYDYNLCDEFSRMKTESHGRFGKDNDRWGFNTTSTIRVTGRHMVNVW 1006
Query: 435 RLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI 494
R +R E+NL YT EN+ +H+LH+RIP +SWK LT W++ H + +Y R
Sbjct: 1007 RAMRGELNLLQYTMENVAWHLLHKRIPHYSWKSLTSWYKSGKHRELNRMLRYYQNRTKLD 1066
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
I +++ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ
Sbjct: 1067 IEILDANELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVG 1126
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
A E LPL++EP+S Y P++VLDFQSLYPSV+IAYNYC+ST LGRV + +
Sbjct: 1127 GQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTNWRGTSKMG 1186
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
F + +L L+ + I+P+G+ + IR +L KML EIL+TR+MVK MK+
Sbjct: 1187 FTEYKRQQGLLTL--LKDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQD 1244
Query: 675 KFSESLRNL 683
K ++L+ L
Sbjct: 1245 KDDKTLQQL 1253
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1103 ESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1158
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGRV
Sbjct: 1159 PSVMIAYNYCYSTFLGRV 1176
>gi|326471536|gb|EGD95545.1| polymerase zeta subunit [Trichophyton tonsurans CBS 112818]
Length = 1694
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 259/477 (54%), Gaps = 54/477 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
IDA T ++ + H NY ++V+++E+H +R L P+P DEV +F+
Sbjct: 809 IDASTQHNKHGFKYSQRTKSSAVQHEANY-MSVMSLEVHVNTRGTLAPNPEEDEVACVFW 867
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + EE R G++++ + L + KP +P I
Sbjct: 868 SVIS--EEEVRHHGVVVVSETYGL-SSKLKP-----------------------EPGIEF 901
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER---G 391
EI +E +L + + VR +DPDIL GYE+ SWGYL+ER G
Sbjct: 902 QEEI---------------SELDLMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKG 946
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
Y +L E SR+ R+ + + +++ GR +IN+WR +R E+NL Y
Sbjct: 947 Y--DYDLCDEFSRVKSQSHGRIGRETDRWGFNHTSTIRITGRHMINIWRAMRGELNLLQY 1004
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
T EN+ +H+LH+RIP + ++ LT W++ T++++ RV + +++ + I R
Sbjct: 1005 TMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISR 1064
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE AR+ GI FY V SRGSQF+VES+M R+++ NF+ +SPS KQ A E LPL++
Sbjct: 1065 TSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQNALECLPLVM 1124
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ + + G D
Sbjct: 1125 EPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNK--MGITDYEREPGL 1182
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L+ + I+P+G+ + + IR +L KML EIL+TR+MVK MKE K L+ L
Sbjct: 1183 LGLLKDQINIAPNGIIYAKQEIRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQRL 1239
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1089 ESLMFRIAKPENFILISPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1144
Query: 125 PSVIIAYNYCFSTCLGRV------EHLGVSD 149
PS++IAYNYC+ST LGR+ +G++D
Sbjct: 1145 PSIMIAYNYCYSTNLGRIVNWRGRNKMGITD 1175
>gi|296804246|ref|XP_002842975.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
gi|238845577|gb|EEQ35239.1| polymerase zeta subunit [Arthroderma otae CBS 113480]
Length = 1625
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 250/446 (56%), Gaps = 49/446 (10%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
Y++V+++E+H +R L P+P DEV +F+ + ++ R GI+ + + +L R
Sbjct: 767 YMSVMSLEVHVNTRGSLAPNPEQDEVACVFWSFIS--EDDGRHRGIVALSEYGDL-SSRL 823
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
KP +P++ E H +E +L + I
Sbjct: 824 KP-----------------------EPEV---------------EFHEDISELDLINRII 845
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDEVK--- 419
VR +DPDIL GYEI SWGYL+ER +L E SR+ R+ +
Sbjct: 846 GVVRYYDPDILTGYEIHNGSWGYLIERARKCYDYDLCDEFSRVKSQSHGRIGREADRWGF 905
Query: 420 --NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+ +++ GR +IN+WR +R E+NL YT EN+ +H+LH+RIP + ++ LT W++
Sbjct: 906 NHTSTIRITGRHMINIWRAMRGELNLLQYTLENVTFHLLHKRIPHYPFEDLTKWFKSDRP 965
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
T++++ +RV ++++E + I RTSE AR+ GI FY V SRGSQF+VES+M R+
Sbjct: 966 RDVAKTLQYFSLRVDLNLQILEANELISRTSEQARILGIDFYSVFSRGSQFKVESLMFRI 1025
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
++ NF+ +SPS KQ A E LPL++EP+S YT P++VLDFQSLYPS++IAYNYC+
Sbjct: 1026 AKPENFILISPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCY 1085
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST LGR+ + G D L L+ + I+P+G+ + + +R +L KML
Sbjct: 1086 STNLGRI--VSWRGRNKMGITDYEREPGLLGLLKDQINIAPNGIIYAKQDVRKSLLAKML 1143
Query: 658 QEILDTRLMVKQSMKEYKFSESLRNL 683
EIL+TR+M+K MKE K + L+ L
Sbjct: 1144 TEILETRVMIKNGMKEDKDDKPLQRL 1169
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 13/75 (17%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+ST LG
Sbjct: 1035 SPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLYPSIMIAYNYCYSTNLG 1090
Query: 141 RV------EHLGVSD 149
R+ +G++D
Sbjct: 1091 RIVSWRGRNKMGITD 1105
>gi|315047094|ref|XP_003172922.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311343308|gb|EFR02511.1| DNA polymerase zeta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1681
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 261/477 (54%), Gaps = 54/477 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
IDA T ++ + + H NY ++V+++E+H +R L P+P DEV IF+
Sbjct: 795 IDAPTQHNKHGFKYSQRDKSSTIQHEANY-MSVMSLEVHVNTRGTLAPNPEEDEVACIFW 853
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + EE R GI+ + + S L ++ ++ +
Sbjct: 854 SIAS--EEEGRHRGIVALSETSNLSS--------------------------KFKCELGV 885
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER---G 391
++ ET +E E+ + I VR +DPDIL GYE+ SWGYL+ER G
Sbjct: 886 EFQEET-------------SELEVINRIIGIVRYYDPDILTGYEVHNGSWGYLIERARRG 932
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
Y +L E SR+ R+ + + +++ GR +IN+WR +R E+NL Y
Sbjct: 933 Y--DYDLCDEFSRVKSQSHGRIGRETDRWGFNHTSTIRVTGRHMINIWRAMRGELNLLQY 990
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
T EN+++H+LH+RIP + ++ LT W++ T+ ++ +RV + +++ + I R
Sbjct: 991 TMENVVFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIRYFSLRVDLNLEILDANELIPR 1050
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE AR+ GI FY V SRGSQF+VES+M R+++ NFV +SP KQ A E LPL++
Sbjct: 1051 TSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFVLISPRRKQVGQQNALECLPLVM 1110
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ + + G D
Sbjct: 1111 EPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNK--MGITDYEREPGL 1168
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L+ + I+P+G+ + + +R +L KML EIL+TR+MVK MKE K L+ L
Sbjct: 1169 LGLLKDKVNIAPNGIIYAKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQRL 1225
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 13/75 (17%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+ST LG
Sbjct: 1091 SPRRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLYPSIMIAYNYCYSTNLG 1146
Query: 141 RV------EHLGVSD 149
R+ +G++D
Sbjct: 1147 RIVNWRGRNKMGITD 1161
>gi|408392217|gb|EKJ71575.1| hypothetical protein FPSE_08214 [Fusarium pseudograminearum CS3096]
Length = 1696
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 256/489 (52%), Gaps = 56/489 (11%)
Query: 208 RICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD 267
R C S I+ TP ++ H E Y++ +++E+H +R P+P D
Sbjct: 823 RNCHS-QIEGPTPKNRHGFKYTPGKKATSVKH-EVQYMSTMSLEVHVNTRGNFVPNPEED 880
Query: 268 EVKAIFYYLYTCPPEEDRK-------VGIILIGQESELPEVRTKPIQMNFVSNEKELFST 320
EV+ F+ + + D + GI+L+ ++E T+ +Q +N
Sbjct: 881 EVQCAFWAIKSDGTSTDSQNSAGTVQTGILLLSNDAEF----TRRVQRQTSAN------- 929
Query: 321 FIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIE 380
IE + D L +E VR DPDIL GYE+
Sbjct: 930 IIEETTELD----------------------------LMVRMVEIVRNHDPDILTGYEVH 961
Query: 381 TLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLW 434
SWGYL+ER + NL E SR+ +D + + +++ GR ++N+W
Sbjct: 962 GSSWGYLIERARLKYDYNLCDEFSRMKTESHGRFGKDNDRWGFNTTSTIRVTGRHMVNVW 1021
Query: 435 RLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI 494
R +R E+NL YT EN+ +H+LH+RIP +SWK LT W++ H + +Y R
Sbjct: 1022 RAMRGELNLLQYTMENVAWHLLHKRIPHYSWKSLTSWYKSGKHRELNRMLRYYQNRAKLD 1081
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
I +++ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ
Sbjct: 1082 IEILDANELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVG 1141
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
A E LPL++EP+S Y P++VLDFQSLYPSV+IAYNYC+ST LGRV + +
Sbjct: 1142 GQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTNWRGTSKMG 1201
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
F + +L L+ + I+P+G+ + IR +L KML EIL+TR+MVK MK+
Sbjct: 1202 FTEYKRQQGLLTL--LKDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQD 1259
Query: 675 KFSESLRNL 683
K ++L+ L
Sbjct: 1260 KDDKTLQQL 1268
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1118 ESIMFRIAKPENFLLVSPSRKQVGGQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1173
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGRV
Sbjct: 1174 PSVMIAYNYCYSTFLGRV 1191
>gi|159127940|gb|EDP53055.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus A1163]
Length = 1656
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 253/471 (53%), Gaps = 41/471 (8%)
Query: 220 PDTTGDYQMGLDNLNEVTS-HVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT 278
P DY + TS + Y++ +++E+H +R +L P+P DE+ IF+
Sbjct: 787 PTQKNDYGFKYSQKGKSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEEDEISCIFW---- 842
Query: 279 CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEI 338
C +D+ V + LP V I S +
Sbjct: 843 CIQSDDQDVDV-----NGNLPGVHVGMIAQGSGDGPTSKLSKALR--------------- 882
Query: 339 ETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLN 397
+E E +L + ++ VR DPDI+ GYE+ SWGYL+ER +
Sbjct: 883 --------IELEHEPTELDLINRLVDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFD 934
Query: 398 LNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
+ ELSR+ +D + + +++ GR +IN+WR +R E+NL YT EN++
Sbjct: 935 ICDELSRVRSQAHGRFDKDADRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQYTIENVV 994
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
+H+LH RIP +S++ LT W++ V++Y+ R+ + ++E + I RTSE AR
Sbjct: 995 FHLLHRRIPHYSYRDLTAWYQSGKPRDVLKVVQYYVSRIQMNLEILESNELIPRTSEQAR 1054
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
L GI F+ V SRGSQF+VES+M R+++ N++ VSPS KQ A E LPL++EP+S
Sbjct: 1055 LLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLVMEPQSDF 1114
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
YT P++VLDFQSLYPS++IAYNYC+ST LGRV + G +D R L+ L+
Sbjct: 1115 YTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVRLWRGRNK--MGFMDYKRQPRVLELLKD 1172
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ I+P+G+ +V +R +L +ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1173 KVNIAPNGMMYVKPEVRQSLLARMLAEILETRVMVKAGMKMDKDDKALQRL 1223
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1073 ESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1128
Query: 125 PSVIIAYNYCFSTCLGRV 142
PS++IAYNYC+ST LGRV
Sbjct: 1129 PSIMIAYNYCYSTFLGRV 1146
>gi|403420400|emb|CCM07100.1| predicted protein [Fibroporia radiculosa]
Length = 1164
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 267/463 (57%), Gaps = 48/463 (10%)
Query: 229 GLDNLNEVTSHV---ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR 285
GL N TS + E+ +++VL++EI A SR L P+P DE+ A+FY
Sbjct: 296 GLVNTPAKTSKLPMREHLHMSVLSLEIFAPSREKLLPNPDEDEIMAVFYSY--------- 346
Query: 286 KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIE--NVRQWDPDILIGYEIETFSW 343
Q+S P+ Q S E+ + + + N R+ + ++IE
Sbjct: 347 --------QDSAGPQS----AQDGTFSCERGIVAVESDCMNARR-----IRDHKIE---- 385
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
FV +E +L + I+ V + DPDI++G+EI+ SWGYL R GL+L ++S
Sbjct: 386 -------FVPSELDLLNRVIDLVIEIDPDIVVGWEIQASSWGYLNARAESYGLDLGDQIS 438
Query: 404 RITEVEKRNSSRDE---VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
R + S D+ + ++ GR V+N+WR++R E N S+ FE++++ +L R
Sbjct: 439 RAFG-RRTGSGSDQWGMRTTSTFKVIGRHVLNVWRIIRAEHNFTSHAFEHVVFQLLRRRT 497
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
P +S + LT W+ + + + ++ RV ++ +++ + + + +E AR+FG+ F+
Sbjct: 498 PWYSCETLTKWYRSTSPYHTSDLLRYFSNRVVMVLEVLDVAEVVTKNAEFARVFGVDFFS 557
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
VLSRGSQF+VES M R+++ +FV +SPS + A E +PLI+EP S Y P++VL
Sbjct: 558 VLSRGSQFKVESFMFRIAKPESFVLLSPSKQDVGKQNAAECMPLIMEPLSAFYNSPLVVL 617
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DFQSLYPSV+IAYNYC+STCLGRV + FG DL+ L+ LQ+++ ++P+G
Sbjct: 618 DFQSLYPSVMIAYNYCYSTCLGRVTDFKGQNK--FGVTDLHQPAGLLETLQEHMHVAPNG 675
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ +V++ +R G+L +ML E+LDTR+MVKQ+MK K ++LR +
Sbjct: 676 MVYVNQDVRKGLLGRMLTELLDTRVMVKQAMKGAKDDKALRRI 718
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y P++VLDFQSLYPSV+IAYNYC+STCLGRV + F
Sbjct: 609 FYNSPLVVLDFQSLYPSVMIAYNYCYSTCLGRVTDFKGQNKF 650
>gi|88604888|gb|ABD46764.1| REV3 [Neurospora crassa]
Length = 1926
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 251/455 (55%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-----CPPE--EDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + C + +D GII+ ++S
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALCGTQAPDDTARGIIVFSEDS 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMVR--------------------- 1013
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1014 -----MVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P+IVLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLIVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGTNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDRAIQQL 1339
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P+IVLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLIVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|121704870|ref|XP_001270698.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119398844|gb|EAW09272.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 1654
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 258/472 (54%), Gaps = 45/472 (9%)
Query: 220 PDTTGDYQMGLDNLNEVTSHVENY--YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY 277
P DY + TS VE++ Y++ +++E+H +R +L P+P DE+ IF+ +
Sbjct: 788 PTQKNDYGFKYSQKGKSTS-VEHHTQYMSSMSLEVHVNTRGVLLPNPEEDEISCIFWCIQ 846
Query: 278 TCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYE 337
+ ED IL G + I +P+I
Sbjct: 847 S--DGEDIDPNGILPG-----------------------VHVGMIAQGNDHEPNI----- 876
Query: 338 IETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGL 396
S +E + E +L + ++ VR DPDI+ GYE+ SWGYL+ER
Sbjct: 877 ----SKALRIELDYEPTELDLINRLVDIVRYHDPDIITGYEVHNSSWGYLIERARKKYDF 932
Query: 397 NLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENI 451
+L ELSR+ ++ + + +++ GR +IN+WR +R E+NL YT EN+
Sbjct: 933 DLCDELSRVKSQAHGRFGKEADRWGFNHTSSIRVTGRHMINIWRSMRGELNLLQYTMENV 992
Query: 452 MYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
+YH+LH RIP +S++ LT W+E VE+++ R+ + +++ + I RTSE A
Sbjct: 993 VYHLLHRRIPHYSFRDLTAWYESGKPRNLLKVVEYFVSRIQMNLEILDSNELIPRTSEQA 1052
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESR 571
RL GI F+ V SRGSQF+VES+M R+++ NF+ VSPS KQ A E LPL++EP+S
Sbjct: 1053 RLLGIDFFSVFSRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQSD 1112
Query: 572 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
YT P++VLDFQSLYPS++IAYNYC+ST LGR + G +D R L+ L+
Sbjct: 1113 FYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRARQWRGRNK--MGFMDYKRQPRVLELLK 1170
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ I+P+G+ +V + +R +L +ML EIL+TR+MVK MK K + L+ L
Sbjct: 1171 DKINIAPNGMMYVKQEVRQSLLARMLAEILETRVMVKTGMKMDKDDKVLQRL 1222
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1072 ESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1127
Query: 125 PSVIIAYNYCFSTCLGRV 142
PS++IAYNYC+ST LGR
Sbjct: 1128 PSIMIAYNYCYSTFLGRA 1145
>gi|302505098|ref|XP_003014770.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
gi|291178076|gb|EFE33867.1| hypothetical protein ARB_07331 [Arthroderma benhamiae CBS 112371]
Length = 1660
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 257/477 (53%), Gaps = 54/477 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID T ++ + H NY ++V+++E+H +R L P+P DEV +F+
Sbjct: 775 IDTSTQHNKHGFKYSQRTKSSAVQHEANY-MSVMSLEVHVNTRGTLAPNPEEDEVACVFW 833
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + EE R G++++ + L + KP E F E++ + D
Sbjct: 834 SVIS--EEEGRHRGVVVLSETYGL-SSKLKP----------EPGIEFQEDMSELD----- 875
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER---G 391
L + + VR +DPDIL GYE+ SWGYL+ER G
Sbjct: 876 -----------------------LMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKG 912
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
Y +L E SR+ SR+ + + +++ GR +IN+WR +R E+NL Y
Sbjct: 913 Y--DYDLCDEFSRVKSQSHGRISRETDRWGFNHTSTIRVTGRHMINIWRAMRGELNLLQY 970
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
T EN+ +H+LH+RIP + ++ LT W++ T++++ RV + +++ + I R
Sbjct: 971 TMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISR 1030
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE AR+ GI FY V SRGSQF+VES+M R+++ NF+ +SPS KQ A E LPL++
Sbjct: 1031 TSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQNALECLPLVM 1090
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ G D
Sbjct: 1091 EPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRI--FNWRGRNKMGITDYEREPGL 1148
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L+ + I+P+G+ +V + +R +L KML EIL+TR+MVK MKE K L+ L
Sbjct: 1149 LGLLKDKINIAPNGIIYVKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQRL 1205
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 13/75 (17%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+ST LG
Sbjct: 1071 SPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLYPSIMIAYNYCYSTNLG 1126
Query: 141 RV------EHLGVSD 149
R+ +G++D
Sbjct: 1127 RIFNWRGRNKMGITD 1141
>gi|345565978|gb|EGX48925.1| hypothetical protein AOL_s00079g146 [Arthrobotrys oligospora ATCC
24927]
Length = 1683
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 267/462 (57%), Gaps = 52/462 (11%)
Query: 234 NEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE-------EDRK 286
+E+ SH E +++V+++EIH +R L PDP DEV IFY + E E
Sbjct: 829 SEIISH-EVQHMSVMSLEIHINTRGTLLPDPVEDEVAMIFYSFRSTDAEQASQGLQEGLH 887
Query: 287 VGIILIGQ-ESELPEVRTK-PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWG 344
GI+L+ + E E ++R PI+++ S+E +L + + VR+ DPDI+ GYE+ SWG
Sbjct: 888 TGILLLSESEFEADKIRKIFPIEVDRESSELDLLLSLVRVVRELDPDIITGYEVHNSSWG 947
Query: 345 YLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR 404
YL+ER + K FS+ PD L +++ S G + G
Sbjct: 948 YLIER---AKHKYDFSL---------PDELSRVKVQ--SHGRFGKEADKWGF-------- 985
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ +++ GR +IN+WR++R E+NL YT EN+++H+L R+P +S
Sbjct: 986 -------------THTSSIRVTGRHLINIWRVMRGELNLLQYTMENVVFHLLARRMPHYS 1032
Query: 465 WKLLTCWWEHRTHLYKWMTV-EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++ LT W+ + W V +++L RV + L++ + + RTSE ARL G+ F+ V S
Sbjct: 1033 YRDLTRWYSGE-KVNAWTRVLKYFLTRVKTDLELLDAQELVLRTSEQARLLGVDFFSVFS 1091
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RGSQF+VES+M R+++ N+V +SPS KQ A E +PL++EP+S YT P++VLDFQ
Sbjct: 1092 RGSQFKVESLMFRIAKPENYVLISPSRKQVGSQNALECIPLVMEPQSNFYTSPVLVLDFQ 1151
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHL--GVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPSV+IA+NYC+STCLGR+ GV+ G D L+ L+ + I+P+G+
Sbjct: 1152 SLYPSVMIAFNYCYSTCLGRIVQWKGGVNK---LGFTDYKRENGLLELLRSQINIAPNGM 1208
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+V +R +L KML EIL+TR+MVK+ MK K + L++L
Sbjct: 1209 MYVKPEVRKSLLAKMLGEILETRVMVKEGMKNDKQDKMLQSL 1250
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDDRP--SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK ++++ + M P S+ YT P++VLDFQSLY
Sbjct: 1099 ESLMFRIAKPENYVLISPSRKQVGSQNALECIPLVMEPQSN----FYTSPVLVLDFQSLY 1154
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IA+NYC+STCLGR+
Sbjct: 1155 PSVMIAFNYCYSTCLGRI 1172
>gi|327305973|ref|XP_003237678.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
gi|326460676|gb|EGD86129.1| hypothetical protein TERG_08729 [Trichophyton rubrum CBS 118892]
Length = 1699
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 259/477 (54%), Gaps = 54/477 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
IDA T ++ + H NY ++V+++E+H +R L P+P DEV +F+
Sbjct: 710 IDASTQHNKHGFKYSQRTKSSAVQHEANY-MSVMSLEVHVNTRGTLAPNPEEDEVACVFW 768
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + EE R GI+++ + L + KP +P +
Sbjct: 769 SVKS--EEEGRHRGIVVLSETYGL-SSKLKP-----------------------EPRLEF 802
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER---G 391
E+ +E +L + + VR +DPDIL GYE+ SWGYL+ER G
Sbjct: 803 QEEM---------------SELDLMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKG 847
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
Y +L E SR+ R+ + + +++ GR +IN+WR +R E+NL Y
Sbjct: 848 Y--DYDLCDEFSRVKSQSHGRIGRETDRWGFNHTSTIRVTGRHMINIWRAMRGELNLLQY 905
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
T EN+ +H+LH+RIP + ++ LT W++ T++++ RV + +++ + I R
Sbjct: 906 TMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISR 965
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
TSE AR+ GI FY V SRGSQF+VES+M R+++ NF+ +SPS KQ A E LPL++
Sbjct: 966 TSEQARILGIDFYSVFSRGSQFKVESLMFRIAKPENFILISPSRKQVGQQNALECLPLVM 1025
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ + + G D
Sbjct: 1026 EPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNK--MGITDYEREPGL 1083
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L+ + I+P+G+ + + +R +L KML EIL+TR+MVK MKE K L+ L
Sbjct: 1084 LGLLKDKINIAPNGIIYAKQEVRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQRL 1140
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 13/75 (17%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S YT P++VLDFQSLYPS++IAYNYC+ST LG
Sbjct: 1006 SPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLYPSIMIAYNYCYSTNLG 1061
Query: 141 RV------EHLGVSD 149
R+ +G++D
Sbjct: 1062 RIVNWRGRNKMGITD 1076
>gi|336264642|ref|XP_003347097.1| hypothetical protein SMAC_05396 [Sordaria macrospora k-hell]
Length = 1947
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 254/446 (56%), Gaps = 40/446 (8%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
Y++ +++E+H +R L PDP DEV+ +F+ L + +E+ + +E++ P+
Sbjct: 932 YMSTMSLEVHVNTRGKLVPDPEEDEVQCVFWCLRS---DEN-------VLRETQAPD--- 978
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+ + + D L+ +I+ ++ +++ + E ++ +
Sbjct: 979 ----------------NTVRGIVVFSEDGLLADKIQKYTSVPVVQE---TTELDVMLRMV 1019
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK--- 419
E VR DPDI GYE+ SWGYL+ER + +L E SR+ +D +
Sbjct: 1020 EIVRNHDPDIFTGYEVHGTSWGYLIERARIKYDFDLCDEFSRMKSQSNGRIGKDADRWGF 1079
Query: 420 --NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP ++WK L+ W+
Sbjct: 1080 NTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYNWKTLSDWYLSGLP 1139
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+
Sbjct: 1140 KDLNKVLRYYLTRTRLDIEILEKNELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRI 1199
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
++ NF+ +SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYNYC+
Sbjct: 1200 AKPENFLLISPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCY 1259
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST LGR+ + + G +D L L+ + ISP+G+ + IR +L KML
Sbjct: 1260 STFLGRI--VSWRGTNKMGFMDYKRQEGLLSLLKDYINISPNGMMYTKPHIRKSLLAKML 1317
Query: 658 QEILDTRLMVKQSMKEYKFSESLRNL 683
EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1318 TEILETRIMVKSGMKQDKDDKALQQL 1343
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y+ P++VLDFQSLYPSV+IAYNYC+ST LG
Sbjct: 1209 SPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1264
Query: 141 RV 142
R+
Sbjct: 1265 RI 1266
>gi|302697887|ref|XP_003038622.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
gi|300112319|gb|EFJ03720.1| hypothetical protein SCHCODRAFT_80794 [Schizophyllum commune H4-8]
Length = 1541
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/480 (35%), Positives = 259/480 (53%), Gaps = 69/480 (14%)
Query: 199 RKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRA 258
R Q+E P + D Y + A +P G Y+ E +T ++E+ +R
Sbjct: 672 RSQIEGPTQ--ADIYGLKA-SPGDAGAYR-------------ERQTMTKFSLELLVPTRG 715
Query: 259 LLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELF 318
L PDP+ D + A+FY C + D G +L P+Q+ V
Sbjct: 716 HLLPDPSEDIIAAVFY----CHQQAD---GQLL-------------PVQIIAVDGP---- 751
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
Q P+ L +I+ V E +L ++ ++ V DPDI+ G+E
Sbjct: 752 --------QLRPERLRDLKIQC-----------VDTELDLLNMVVDTVVDLDPDIIAGWE 792
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV------KNTQLQMPGRIVIN 432
+T SWGYL+ RG GL++ + R +R +S + K T +++PGR V+N
Sbjct: 793 AQTQSWGYLVARGNDYGLDIADLMGRAPP--RRAASAQGLDRWGLRKGTTIKVPGRHVLN 850
Query: 433 LWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVT 492
+WRL+R E+ L Y+FEN+ +HVL R+P ++ LT W+ + + + R
Sbjct: 851 IWRLMRTELTLSVYSFENVAFHVLRRRVPAYNHATLTRWFNSDVPHHTTQALHYLANRTL 910
Query: 493 GIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ 552
+ ++E + + + +E AR+FG+ FY VL+RGSQF+VES M RL++ ++V +SPS
Sbjct: 911 MDLEILEGSEVVTKNAEFARVFGVDFYSVLTRGSQFKVESFMFRLAKPESYVLLSPSKID 970
Query: 553 RAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 612
A E +PLI+EP S Y+ P++VLDFQSLYPSV+IAYNY + TCLGR+
Sbjct: 971 VGKQNAAECMPLIMEPTSAFYSSPLLVLDFQSLYPSVMIAYNYSYDTCLGRITPF--QGR 1028
Query: 613 FPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ FG DLN+ + + LQ ++ ISP+G+A+V + IR G+L +ML E+LDTR+MVKQ+MK
Sbjct: 1029 YKFGVTDLNIPKGTYELLQDDINISPNGIAYVKQRIRRGLLGRMLTELLDTRVMVKQAMK 1088
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 10/56 (17%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE------HLGVSD 149
M P+S+ Y+ P++VLDFQSLYPSV+IAYNY + TCLGR+ GV+D
Sbjct: 984 MEPTSA----FYSSPLLVLDFQSLYPSVMIAYNYSYDTCLGRITPFQGRYKFGVTD 1035
>gi|302783240|ref|XP_002973393.1| hypothetical protein SELMODRAFT_413713 [Selaginella moellendorffii]
gi|300159146|gb|EFJ25767.1| hypothetical protein SELMODRAFT_413713 [Selaginella moellendorffii]
Length = 1656
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 245/459 (53%), Gaps = 66/459 (14%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+TV+++E A +R L+PDP YD + I + E + I LI + EL + + +
Sbjct: 817 VTVMSIEALAETRGSLRPDPHYDSISCI--AIVVADDTETTRETIALI-HDKELQDGK-R 872
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
P S F T E L FIE
Sbjct: 873 PSDGLSCSPNTSYFPT----------------------------------EVALLQFFIE 898
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS----------- 413
VR +DPDI+IG+EI+ LS G+L ER LG+ L +SR NS
Sbjct: 899 LVRAYDPDIIIGWEIQRLSLGFLAERAANLGVGLLASISRTPPRSGHNSLSSTFFSDGEK 958
Query: 414 --SRDEVKNTQLQ------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
E T +Q + GR V+NLWR++R EV L +YT E + VL +
Sbjct: 959 TGGIAEANKTIIQDEWGRTHGSGIYVGGRTVLNLWRIMRGEVKLSNYTIECVGEEVLKRK 1018
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
+P SW+ LT W+ ++ +VE+ + R +++++QLD + RT+E+AR+FGI FY
Sbjct: 1019 VPRISWRDLTKWFASGAGGNRFRSVEYLINRTALNLQILDQLDIVNRTAELARVFGIDFY 1078
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
V SRGSQ+RVES+M+RL+ NF+A+SPS +Q A A E LPL+LEPES+LYT P++V
Sbjct: 1079 SVFSRGSQYRVESMMMRLAHSQNFLAISPSKEQVAAQPAMECLPLVLEPESKLYTSPVVV 1138
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDFQSLYPS+IIAYN CFSTCLG+ L + G L + L+ L L ++P+
Sbjct: 1139 LDFQSLYPSMIIAYNLCFSTCLGKCISL---NPKVLGVTKLWIPPSLLRSLVDKLIVTPN 1195
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSE 678
G+ FV I G+LP++L EIL TR+MVK MK+ S+
Sbjct: 1196 GIMFVPPEIAPGVLPRLLLEILSTRIMVKGKMKKLDASQ 1234
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
+LYT P++VLDFQSLYPS+IIAYN CFSTCLG+
Sbjct: 1130 KLYTSPVVVLDFQSLYPSMIIAYNLCFSTCLGK 1162
>gi|380093792|emb|CCC08756.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1959
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 256/446 (57%), Gaps = 40/446 (8%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
Y++ +++E+H +R L PDP DEV+ +F+ L + +E+ + +E++ P+
Sbjct: 944 YMSTMSLEVHVNTRGKLVPDPEEDEVQCVFWCLRS---DEN-------VLRETQAPDNTV 993
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+ I +FS D L+ +I+ ++ +++ + E ++ +
Sbjct: 994 RGIV---------VFSE----------DGLLADKIQKYTSVPVVQE---TTELDVMLRMV 1031
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK--- 419
E VR DPDI GYE+ SWGYL+ER + +L E SR+ +D +
Sbjct: 1032 EIVRNHDPDIFTGYEVHGTSWGYLIERARIKYDFDLCDEFSRMKSQSNGRIGKDADRWGF 1091
Query: 420 --NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP ++WK L+ W+
Sbjct: 1092 NTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYNWKTLSDWYLSGLP 1151
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+
Sbjct: 1152 KDLNKVLRYYLTRTRLDIEILEKNELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRI 1211
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
++ NF+ +SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYNYC+
Sbjct: 1212 AKPENFLLISPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCY 1271
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST LGR+ + + G +D L L+ + ISP+G+ + IR +L KML
Sbjct: 1272 STFLGRI--VSWRGTNKMGFMDYKRQEGLLSLLKDYINISPNGMMYTKPHIRKSLLAKML 1329
Query: 658 QEILDTRLMVKQSMKEYKFSESLRNL 683
EIL+TR+MVK MK+ K ++L+ L
Sbjct: 1330 TEILETRIMVKSGMKQDKDDKALQQL 1355
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y+ P++VLDFQSLYPSV+IAYNYC+ST LG
Sbjct: 1221 SPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1276
Query: 141 RV 142
R+
Sbjct: 1277 RI 1278
>gi|336383793|gb|EGO24942.1| hypothetical protein SERLADRAFT_361773 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1560
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 254/445 (57%), Gaps = 52/445 (11%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E+ +T+L++E+ A SR PD DE+ A+FY E+ + G++++ E
Sbjct: 722 ESQNMTMLSLEVFAPSRGDRVPDANVDEIVAVFYTFSIDGRSENYEKGMVVVKNE----- 776
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+ DP L + +E V +E EL +
Sbjct: 777 --------------------------RLDPRRLRNFCVEV-----------VPDELELLN 799
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVK- 419
I+ V DPDI++G+E++T SWGY+ RG G + + ++R RN++ +
Sbjct: 800 KVIDIVIDVDPDIVVGWEVQTASWGYVNSRGRHYGFEIGELIAR---APSRNNTGGNDQW 856
Query: 420 ----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
++ Q+ GR V N+WR+++ E NL YTFEN+ +H+L RIP +S+ LT W++
Sbjct: 857 GLRTSSTFQVIGRHVFNVWRIMQVEQNLGIYTFENVAFHILKRRIPRYSFSTLTEWYKSS 916
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
++ + H R + ++ ++++ + + + +E AR+FG+ F+ V+SRGSQF+VES M
Sbjct: 917 DPVHTSRLLRHLSERTSTVLDILDEAETVTKNAEFARVFGVDFFSVISRGSQFKVESFMF 976
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R+++ +FV +SPS + A E +PLI+EP S Y P++VLDFQSLYPS++IAYNY
Sbjct: 977 RIAKPESFVLLSPSKEDVGKQNAAECMPLIMEPLSAFYNGPLVVLDFQSLYPSIMIAYNY 1036
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPK 655
C+STCLGRV + FG +L+ L+KLQ ++T++P+G+ +V +R G+L +
Sbjct: 1037 CYSTCLGRVGEFQGQNK--FGVTELHHPAGLLQKLQDHITVAPNGIMYVKSDVRKGLLGR 1094
Query: 656 MLQEILDTRLMVKQSMKEYKFSESL 680
ML E+L+TR+MVKQ+MK + +++L
Sbjct: 1095 MLTELLETRVMVKQAMKSARGNKAL 1119
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y P++VLDFQSLYPS++IAYNYC+STCLGRV + F
Sbjct: 1013 FYNGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVGEFQGQNKF 1054
>gi|425780984|gb|EKV18966.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1678
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 257/465 (55%), Gaps = 60/465 (12%)
Query: 236 VTSHVENY--YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV------ 287
V++ VE+ +++ +++E+H +R +L P+P DE+ ++F+ C ED V
Sbjct: 841 VSTSVEHQAQHMSTMSLEVHVNTRGILLPNPEEDEITSLFW----CIQSEDEDVEVNSHL 896
Query: 288 -----GIILIGQESELPEVRTKP---IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIE 339
G++ G E E PE + I + E +L + I+ VR +DPDI+ GYE+
Sbjct: 897 PGVHVGMVYHG-EGERPEAKISKALTIDVECEPTELDLINRLIDLVRYYDPDIITGYEVH 955
Query: 340 TFSWGYLLERHFVSNEKELFSIFIENVR-QWDPDILIGYEIETLSWGYLLERGYVLGLNL 398
SWGY++ER + +K F I E R + + G E + SWG+
Sbjct: 956 NASWGYVIER---ARKKYDFDICEELSRTKSQSNGRFGKEAD--SWGF------------ 998
Query: 399 NQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
NSS +++ GR + N+WR ++ E+NL YT EN+++H+LH
Sbjct: 999 ------------NNSS-------SIRITGRHMFNIWRAMKGELNLLQYTMENVVFHILHR 1039
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
RIP +S + LT W++ VE++ RV + ++E + RTSE ARL GI F
Sbjct: 1040 RIPHYSPRDLTQWYQSGKPRNLLKVVEYFTSRVQLNLEILEASELTPRTSEQARLLGIDF 1099
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
V+SRGSQF+VES+M R+++ NF+ VSPS KQ A E LPL+LEP+S YT P++
Sbjct: 1100 ASVISRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEPQSDFYTSPLL 1159
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
VLDFQSLYPSV+IAYNYC+ST LGR H D G +D R L+ L+ + ISP
Sbjct: 1160 VLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDK--MGFMDYKRQPRLLELLKDKINISP 1217
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+G+ + + R +L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1218 NGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKADKDDKVLQRL 1262
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSV 127
ES + R KP++ SP+RK +++ + D YT P++VLDFQSLYPSV
Sbjct: 1112 ESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEPQSD-FYTSPLLVLDFQSLYPSV 1170
Query: 128 IIAYNYCFSTCLGRVEHLGVSDSFPF 153
+IAYNYC+ST LGR H D F
Sbjct: 1171 MIAYNYCYSTFLGRAMHWRGRDKMGF 1196
>gi|322696805|gb|EFY88592.1| hypothetical protein MAC_05357 [Metarhizium acridum CQMa 102]
Length = 1677
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 247/459 (53%), Gaps = 60/459 (13%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV----------GII 290
E Y++ +++EIH +R P+P DEV+ IF+ C +E + GI+
Sbjct: 833 EVQYMSTMSLEIHVNTRGKYVPNPEEDEVQCIFW---VCKSDEAIGISQNTSGTIHTGIV 889
Query: 291 LIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERH 350
++ Q+ + E + P K S IE
Sbjct: 890 VLSQDGK--ETQAMP---------KSTGSDIIEE-------------------------- 912
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVE 409
S+E +L +E VR +DPDIL GYE+ SWGYL+ER NL E SR+
Sbjct: 913 --SSELDLIVRMVEIVRTFDPDILTGYEVHGSSWGYLIERARCKYDYNLCDEFSRMKSDS 970
Query: 410 ----KRNSSRDEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ S R T +++ GR +IN+WR +R E+NL YT EN+ +H+LH R+P +S
Sbjct: 971 HGRFGKQSDRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYTLENVAWHLLHRRVPHYS 1030
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
W+ LT W++ V +Y R I+++E + I RTSE ARL G+ F+ V SR
Sbjct: 1031 WRTLTSWYKSGKSSDLGKVVRYYQTRTLMDIQILETNELIPRTSEQARLLGVDFFSVFSR 1090
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP+S Y P++VLDFQS
Sbjct: 1091 GSQFKVESIMFRIAKPENFILVSPSRKQVGSQNALECLPLVMEPQSAFYNSPLLVLDFQS 1150
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPSV+IAYNYC+ST LGR+ + + F + +L L+ ++ I+P+G+ +V
Sbjct: 1151 LYPSVMIAYNYCYSTFLGRITNWRGVNKMGFAEYKRQEGLLAL--LKDHVNIAPNGMMYV 1208
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
IR +L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1209 KPEIRKSLLAKMLTEILETRVMVKSGMKSDKDDKVLQQL 1247
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK ++++ + M P S+ Y P++VLDFQSLY
Sbjct: 1097 ESIMFRIAKPENFILVSPSRKQVGSQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1152
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1153 PSVMIAYNYCYSTFLGRI 1170
>gi|400595538|gb|EJP63333.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1672
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 261/483 (54%), Gaps = 57/483 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP Y+ + H E Y++ +++E+H +RA L P+P DEV+ IF+
Sbjct: 788 IDGPTPKNKHGYKYTQQRKSTSVQH-EVQYMSTMSLEVHVNTRAKLVPNPEEDEVQCIFW 846
Query: 275 ------YLYTCPPEEDRKV-GIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQ 327
Y + D + G+I++ + + K + + + EL
Sbjct: 847 CCKGDEVTYASQDDGDGTISGLIVLASGGDAAKRMRKSCKTEVIEEKTEL---------- 896
Query: 328 WDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYL 387
D+L+ ++ V++ DPD+L GYE+ SWG+L
Sbjct: 897 ---DLLVR--------------------------LVDVVKELDPDVLTGYEVHGGSWGFL 927
Query: 388 LERGYV-LGLNLNQELSRITEVE----KRNSSRDEVKNTQ-LQMPGRIVINLWRLLRHEV 441
+ER + NL ELSR+ + S R T +++ GR +IN+WR +R E+
Sbjct: 928 MERARLKYDYNLCDELSRVNAQSHGRFGKQSDRWGFNTTSTIRVTGRHMINIWRAMRGEL 987
Query: 442 NLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQ 500
NL YT EN+ +H+LH R+P +S+K LT W++ + + YL T I ++++E
Sbjct: 988 NLLQYTMENVAWHLLHRRVPHYSYKTLTAWYKS-GKPHDLSKLLRYLQSRTKIDLQILEA 1046
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+ I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ +SPS KQ A E
Sbjct: 1047 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSKKQVGSQNALE 1106
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
LPL++EP+S Y+ P++VLDFQSLYPSV+IAYNYC+ST LGR+ + ++ F
Sbjct: 1107 CLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRIVNWCGTNKMGFAEYKR 1166
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+ +L L+ ++ I+P+G+ FV IR +L KML EIL+TR+MVK MKE K + L
Sbjct: 1167 QAGLMAL--LKDHINIAPNGMMFVKAEIRKSLLAKMLTEILETRVMVKSGMKEDKDDKML 1224
Query: 681 RNL 683
+ L
Sbjct: 1225 QQL 1227
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP++K ++++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1077 ESIMFRIAKPENFLLISPSKKQVGSQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1132
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1133 PSVMIAYNYCYSTFLGRI 1150
>gi|425783247|gb|EKV21104.1| DNA polymerase [Penicillium digitatum Pd1]
Length = 1698
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 257/465 (55%), Gaps = 60/465 (12%)
Query: 236 VTSHVENY--YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV------ 287
V++ VE+ +++ +++E+H +R +L P+P DE+ ++F+ C ED V
Sbjct: 841 VSTSVEHQAQHMSTMSLEVHVNTRGILLPNPEEDEITSLFW----CIQSEDEDVEVNSHL 896
Query: 288 -----GIILIGQESELPEVRTKP---IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIE 339
G++ G E E PE + I + E +L + I+ VR +DPDI+ GYE+
Sbjct: 897 PGVHVGMVYHG-EGERPEAKISKALTIDVECEPTELDLINRLIDLVRYYDPDIITGYEVH 955
Query: 340 TFSWGYLLERHFVSNEKELFSIFIENVR-QWDPDILIGYEIETLSWGYLLERGYVLGLNL 398
SWGY++ER + +K F I E R + + G E + SWG+
Sbjct: 956 NASWGYVIER---ARKKYDFDICEELSRTKSQSNGRFGKEAD--SWGF------------ 998
Query: 399 NQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
NSS +++ GR + N+WR ++ E+NL YT EN+++H+LH
Sbjct: 999 ------------NNSS-------SIRITGRHMFNIWRAMKGELNLLQYTMENVVFHILHR 1039
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
RIP +S + LT W++ VE++ RV + ++E + RTSE ARL GI F
Sbjct: 1040 RIPHYSPRDLTQWYQSGKPRNLLKVVEYFTSRVQLNLEILEASELTPRTSEQARLLGIDF 1099
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
V+SRGSQF+VES+M R+++ NF+ VSPS KQ A E LPL+LEP+S YT P++
Sbjct: 1100 ASVISRGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEPQSDFYTSPLL 1159
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
VLDFQSLYPSV+IAYNYC+ST LGR H D G +D R L+ L+ + ISP
Sbjct: 1160 VLDFQSLYPSVMIAYNYCYSTFLGRAMHWRGRDK--MGFMDYKRQPRLLELLKDKINISP 1217
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+G+ + + R +L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1218 NGMMYAKQEARQSLLAKMLSEILETRVMVKNGMKADKDDKVLQRL 1262
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSV 127
ES + R KP++ SP+RK +++ + D YT P++VLDFQSLYPSV
Sbjct: 1112 ESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVLEPQSD-FYTSPLLVLDFQSLYPSV 1170
Query: 128 IIAYNYCFSTCLGRVEHLGVSDSFPF 153
+IAYNYC+ST LGR H D F
Sbjct: 1171 MIAYNYCYSTFLGRAMHWRGRDKMGF 1196
>gi|302789498|ref|XP_002976517.1| hypothetical protein SELMODRAFT_443228 [Selaginella moellendorffii]
gi|300155555|gb|EFJ22186.1| hypothetical protein SELMODRAFT_443228 [Selaginella moellendorffii]
Length = 2679
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 245/459 (53%), Gaps = 66/459 (14%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+TV+++E A +R L+PDP YD + I + E + I LI + EL + + +
Sbjct: 804 VTVMSIEALAETRGSLRPDPHYDSISCI--AIVVADDTETTRETIALI-HDKELQDGK-R 859
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
P S F T E L FIE
Sbjct: 860 PSDGLSCSPNTSYFPT----------------------------------EVALLQFFIE 885
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRD-------- 416
VR +DPDI+IG+EI+ LS G+L ER LG+ L +SR NS
Sbjct: 886 LVRAYDPDIIIGWEIQRLSLGFLAERAANLGVGLLASISRTPPRSGHNSLSSTFFSDGEK 945
Query: 417 -----EVKNTQLQ------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
E T +Q + GR V+NLWR++R EV L +YT E + VL +
Sbjct: 946 TGGIAEANKTIIQDEWGRTHGSGIYVGGRTVLNLWRIMRGEVKLSNYTVECVGEEVLKRK 1005
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
+P SW+ LT W+ ++ +VE+ + R +++++QLD + RT+E+AR+FGI FY
Sbjct: 1006 VPRISWRDLTKWFASGAGGNRFRSVEYLINRTALNLQILDQLDIVNRTAELARVFGIDFY 1065
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
V SRGSQ+RVES+MLRL+ NF+A+SPS +Q A A E LPL+LEPES+LYT P++V
Sbjct: 1066 SVFSRGSQYRVESMMLRLAHSQNFLAISPSKEQVAAQPAMECLPLVLEPESKLYTSPVVV 1125
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDFQSLYPS+IIAYN CFSTCLG+ L + G L + L+ L L ++P+
Sbjct: 1126 LDFQSLYPSMIIAYNLCFSTCLGKCISL---NPKVLGVTKLWIPPSLLRSLVDKLIVTPN 1182
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSE 678
G+ FV I G+LP++L EIL TR+MVK MK+ S+
Sbjct: 1183 GIMFVPPEIAPGVLPRLLLEILSTRIMVKGKMKKLDASQ 1221
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
+LYT P++VLDFQSLYPS+IIAYN CFSTCLG+
Sbjct: 1117 KLYTSPVVVLDFQSLYPSMIIAYNLCFSTCLGK 1149
>gi|342878035|gb|EGU79446.1| hypothetical protein FOXB_10031 [Fusarium oxysporum Fo5176]
Length = 1682
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 54/481 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP ++ + H E Y++ +++E+H +R P+P DEV+ +F+
Sbjct: 816 IDGPTPKNKHGFKYTPGKKSTSVQH-EIQYMSTMSLEVHVNTRGKFVPNPEEDEVQCVFW 874
Query: 275 YLY---TCPPEEDR---KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQW 328
+ T +D + GI+L+ ++E T+ IQ RQ
Sbjct: 875 AIKSDGTASGSQDSAGVQTGILLLSNDAEF----TQRIQ------------------RQT 912
Query: 329 DPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLL 388
+ ++ IE S E +L +E VR DPDIL GYE+ SWGYL+
Sbjct: 913 NAEV-----IEENS------------ELDLMVRMVEIVRNHDPDILTGYEVHGSSWGYLI 955
Query: 389 ERGYV-LGLNLNQELSRI-TEVEKRNSSRDEV----KNTQLQMPGRIVINLWRLLRHEVN 442
ER + NL E SR+ TE R ++ + +++ GR ++N+WR +R E+N
Sbjct: 956 ERARLKYDYNLCDEFSRMKTESHGRFGKENDRWGFNTTSTIRVTGRHMVNVWRAMRGELN 1015
Query: 443 LQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLD 502
L YT EN+++H+LH RIP +SW+ LT W++ H + +Y R + +++ +
Sbjct: 1016 LLQYTMENVVWHLLHRRIPHYSWQSLTNWYKGGKHRELNRMLRYYQNRTKIDLEILDANE 1075
Query: 503 FIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL 562
+ RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ VSP+ KQ A E L
Sbjct: 1076 LVSRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPNRKQVGGQNALECL 1135
Query: 563 PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNV 622
PL++EP+S Y P++VLDFQSLYPSV+IAYNYC+ST LGRV + F
Sbjct: 1136 PLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTDWRGMNKMGFTEYKRQK 1195
Query: 623 SIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRN 682
+ +L L+ + I+P+G+ + IR +L KML EIL+TR+MVK MK+ K ++L+
Sbjct: 1196 GLLAL--LEDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQDKDDKTLQQ 1253
Query: 683 L 683
L
Sbjct: 1254 L 1254
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1104 ESIMFRIAKPENFLLVSPNRKQVGGQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1159
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGRV
Sbjct: 1160 PSVMIAYNYCYSTFLGRV 1177
>gi|88604884|gb|ABD46762.1| REV3 [Neurospora crassa]
Length = 1926
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 261/495 (52%), Gaps = 59/495 (11%)
Query: 204 TPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPD 263
TP R I +TP ++ +E + + Y++ +++E+H +R L PD
Sbjct: 889 TPLRIKTYRSQIAGVTPKNKHGFEHPEKTKSE-SKQDQAQYMSAMSLEVHVNTRGKLVPD 947
Query: 264 PAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKE 316
P DEV+ +F+YL + +D GII+ ++S L + K + V E
Sbjct: 948 PEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKHTSVPVVQETTE 1007
Query: 317 LFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIG 376
L D+++ +E VR DPDI G
Sbjct: 1008 L-------------DMMVR--------------------------MVEIVRNHDPDIFTG 1028
Query: 377 YEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIV 430
YE+ SWGYL+ER + L+L E SR+ +D + + +++ GR +
Sbjct: 1029 YEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGKDADRWGFNTTSSIRITGRHM 1088
Query: 431 INLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW--EHRTHLYKWMTVEHYL 488
IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+ W+ + L K + +YL
Sbjct: 1089 INIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDK--VLRYYL 1146
Query: 489 IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
R I ++E+ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ SP
Sbjct: 1147 TRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSP 1206
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 608
S KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYNYC+ST LGR+ +
Sbjct: 1207 SRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI--VS 1264
Query: 609 VSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVK 668
G +D L L+ + I+P+G+ + IR +L KML EIL+TR+MVK
Sbjct: 1265 WRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVK 1324
Query: 669 QSMKEYKFSESLRNL 683
MK+ K +++ L
Sbjct: 1325 SGMKQDKDDRAIQQL 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|154291721|ref|XP_001546441.1| hypothetical protein BC1G_15151 [Botryotinia fuckeliana B05.10]
Length = 1710
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 251/458 (54%), Gaps = 43/458 (9%)
Query: 232 NLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIIL 291
N + E Y++V+++E+H +R P+P DE++ IF+ C +D +
Sbjct: 850 NGKTINVQREAQYMSVMSLEVHVNTRGGFVPNPEEDEIQCIFF----CFQADDNGI---- 901
Query: 292 IGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
P ++ + S NV E S E H
Sbjct: 902 ----------EGSPSKLGIA-----VLSADENNV------------AEKISNQVPFEVHA 934
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEK 410
++E +L +E VR+ DPDIL G+E+ SWGYL+ER +L E SR+ +
Sbjct: 935 ETSELDLLVRIVEIVRECDPDILTGFEVHGGSWGYLIERARTKYDYDLCDEFSRMKDQSY 994
Query: 411 RNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D K + +++ GR +IN+WR +R E+NL +T EN+ +H+LH RIP +SW
Sbjct: 995 GRFGKDNDKWGFDNTSTIRVTGRHIINIWRAMRAELNLLQHTLENVAFHLLHRRIPHYSW 1054
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
L W+ + T + +Y+ V + ++EQ + I RTSE ARL G+ F+ V SRG
Sbjct: 1055 ADLRNWYTNGTARDLSKVLAYYVSHVELNLEILEQTELIPRTSEQARLLGVDFFSVFSRG 1114
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VES+M R+++ NF+ +SPS KQ A E LPL++EP+S Y+ P++VLDFQSL
Sbjct: 1115 SQFKVESLMFRIAKPENFILISPSRKQVGGQNALECLPLVMEPQSAFYSSPLLVLDFQSL 1174
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YPSV+IAYNYC+ST LGRV + ++ G + R L+ L+ ++ I+P+G+ +
Sbjct: 1175 YPSVMIAYNYCYSTYLGRVVNWRGTNK--MGFTEYTREDRLLELLKDHINIAPNGMMYAK 1232
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+IR +L KML EIL+TR+MVK MK K ++L+ L
Sbjct: 1233 PNIRKSLLAKMLGEILETRVMVKSGMKLDKEDKALQRL 1270
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1120 ESLMFRIAKPENFILISPSRKQVGGQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1175
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGRV
Sbjct: 1176 PSVMIAYNYCYSTYLGRV 1193
>gi|242046854|ref|XP_002461173.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
gi|241924550|gb|EER97694.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
Length = 1714
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 253/464 (54%), Gaps = 70/464 (15%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L++E+ SR L+PDP +D + A+ + E+D + +V
Sbjct: 840 LTILSMEVLTESRGELRPDPRFDAINAVSLAI-----EDDADNTV----------DVHVF 884
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
N S+ + L D + GY ++ F EK+L + FI
Sbjct: 885 ICDNNSKSHRRNL-------------DGIAGYNVDVFP-----------EEKDLLNNFIS 920
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----------------TEV 408
V DPDIL+G+EI+ S G+L ER LG+ L + +SR ++V
Sbjct: 921 AVCSIDPDILVGWEIQLGSLGFLAERAAYLGIGLLKRISRTPPHELNHPPKIPVDNSSQV 980
Query: 409 EKRNSSRDEVKN------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
SS D++ + + + + GRIV+NLWRL+R EV L +Y+ E + VL
Sbjct: 981 LSETSSADDIIDDVSENDWSHTHASGIHVGGRIVLNLWRLMRAEVKLNNYSLEAVADEVL 1040
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
+IPL ++L W+ + +E+ R + ++ QLD + RTSE+AR+FGI
Sbjct: 1041 RRKIPLIPSRILNRWFATGPGRGRHRCIEYISNRTRINLEIMNQLDLVNRTSELARVFGI 1100
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E LPL++EPES Y DP
Sbjct: 1101 DFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYPDP 1160
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
++VLDFQSLYPS+IIAYN C+STCLG+V S S G + +L L+ L +
Sbjct: 1161 VVVLDFQSLYPSMIIAYNLCYSTCLGKV---FPSKSNVLGVSSYSADPHTLVDLKNQLLL 1217
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+P+GV +V IR G+LP++L+EIL TR+MVKQ+MK+ S+ +
Sbjct: 1218 TPNGVLYVQPKIRKGVLPRLLEEILSTRIMVKQAMKKLSPSQQV 1261
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y DP++VLDFQSLYPS+IIAYN C+STCLG+V
Sbjct: 1156 FYPDPVVVLDFQSLYPSMIIAYNLCYSTCLGKV 1188
>gi|85112057|ref|XP_964235.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
gi|18150172|dbj|BAB83627.1| catalytic subunit of DNA polymerase zeta [Neurospora crassa]
gi|28926008|gb|EAA34999.1| hypothetical protein NCU01951 [Neurospora crassa OR74A]
Length = 1926
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 261/495 (52%), Gaps = 59/495 (11%)
Query: 204 TPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPD 263
TP R I +TP ++ +E + + Y++ +++E+H +R L PD
Sbjct: 889 TPLRIKTYRSQIAGVTPKNKHGFEHPEKTKSE-SKQDQAQYMSAMSLEVHVNTRGKLVPD 947
Query: 264 PAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKE 316
P DEV+ +F+YL + +D GII+ ++S L + K + V E
Sbjct: 948 PEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDSLLADRIRKHTSVPVVQETTE 1007
Query: 317 LFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIG 376
L D+++ +E VR DPDI G
Sbjct: 1008 L-------------DMMVR--------------------------MVEIVRNHDPDIFTG 1028
Query: 377 YEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIV 430
YE+ SWGYL+ER + L+L E SR+ +D + + +++ GR +
Sbjct: 1029 YEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGKDADRWGFNTTSSIRITGRHM 1088
Query: 431 INLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW--EHRTHLYKWMTVEHYL 488
IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+ W+ + L K + +YL
Sbjct: 1089 INIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDK--VLRYYL 1146
Query: 489 IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
R I ++E+ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ SP
Sbjct: 1147 TRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLPSP 1206
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 608
S KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYNYC+ST LGR+ +
Sbjct: 1207 SRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI--VS 1264
Query: 609 VSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVK 668
G +D L L+ + I+P+G+ + IR +L KML EIL+TR+MVK
Sbjct: 1265 WRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVK 1324
Query: 669 QSMKEYKFSESLRNL 683
MK+ K +++ L
Sbjct: 1325 SGMKQDKDDRAIQQL 1339
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|347840175|emb|CCD54747.1| similar to DNA polymerase zeta catalytic subunit [Botryotinia
fuckeliana]
Length = 1707
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 251/458 (54%), Gaps = 43/458 (9%)
Query: 232 NLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIIL 291
N + E Y++V+++E+H +R P+P DE++ IF+ C +D +
Sbjct: 847 NGKTINVQREAQYMSVMSLEVHVNTRGGFVPNPEEDEIQCIFF----CFQADDNGI---- 898
Query: 292 IGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
P ++ + S NV E S E H
Sbjct: 899 ----------EGSPSKLGIA-----VLSADENNV------------AEKISNQVPFEVHA 931
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEK 410
++E +L +E VR+ DPDIL G+E+ SWGYL+ER +L E SR+ +
Sbjct: 932 ETSELDLLVRIVEIVRECDPDILTGFEVHGGSWGYLIERARTKYDYDLCDEFSRMKDQSY 991
Query: 411 RNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D K + +++ GR +IN+WR +R E+NL +T EN+ +H+LH RIP +SW
Sbjct: 992 GRFGKDNDKWGFDNTSTIRVTGRHIINIWRAMRAELNLLQHTLENVAFHLLHRRIPHYSW 1051
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
L W+ + T + +Y+ V + ++EQ + I RTSE ARL G+ F+ V SRG
Sbjct: 1052 ADLRNWYTNGTARDLSKVLAYYVSHVELNLEILEQTELIPRTSEQARLLGVDFFSVFSRG 1111
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VES+M R+++ NF+ +SPS KQ A E LPL++EP+S Y+ P++VLDFQSL
Sbjct: 1112 SQFKVESLMFRIAKPENFILISPSRKQVGGQNALECLPLVMEPQSAFYSSPLLVLDFQSL 1171
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YPSV+IAYNYC+ST LGRV + ++ G + R L+ L+ ++ I+P+G+ +
Sbjct: 1172 YPSVMIAYNYCYSTYLGRVVNWRGTNK--MGFTEYTREDRLLELLKDHINIAPNGMMYAK 1229
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+IR +L KML EIL+TR+MVK MK K ++L+ L
Sbjct: 1230 PNIRKSLLAKMLGEILETRVMVKSGMKLDKEDKALQRL 1267
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1117 ESLMFRIAKPENFILISPSRKQVGGQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1172
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGRV
Sbjct: 1173 PSVMIAYNYCYSTYLGRV 1190
>gi|358253098|dbj|GAA52053.1| DNA polymerase zeta subunit [Clonorchis sinensis]
Length = 3068
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 240/411 (58%), Gaps = 35/411 (8%)
Query: 303 TKPIQMNFVSNEKE--LFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
++ ++ F+ E E L S + ++ +DPD+LIGY++E +SWGYL++R N
Sbjct: 1770 SRTVRTRFIWCESEWNLLSWVVYFLQWYDPDLLIGYDVERYSWGYLVQRASYLNRPH--- 1826
Query: 361 IFIENVRQWDPDI--------LIGYEIETLSWGYLLERGYVLGLNLNQELS----RITEV 408
+ + + PDI LI + + ++ L ++++ R+ V
Sbjct: 1827 -YPRELSRLAPDIPKCPCCGRLIAFVGQFVNQSGSLHLDESTLTDMDRSACCCPCRLAPV 1885
Query: 409 EKRNSSRDEV---------------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMY 453
+++ S+ Q PGR+V+ LWR++ E+NL Y+ E ++
Sbjct: 1886 SEKSPSKGSPLHRFPGWPPALVSGRTGGQFPCPGRVVLCLWRIVMSELNLYEYSLETVVL 1945
Query: 454 HVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
H+L E +P + L W+ + +W TV+++ R R+IE LD +GRTSE AR+
Sbjct: 1946 HLLKEPVPKFGFGQLHQWFFEVPGMNRWRTVDYWCYRSLVNHRIIEALDLVGRTSEFARV 2005
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLY 573
FGI+F+ VLSRGSQ+RVES++ R + NF+ SPS+ QRA RAPE++PL LEP+SRL+
Sbjct: 2006 FGIEFFHVLSRGSQYRVESLLCRTAHAANFLLASPSVTQRAQQRAPEAIPLNLEPDSRLF 2065
Query: 574 TD-PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
D P+ VLDFQSLYPS++IAYNYC+STCLGR+ L D F + +I + L+Q
Sbjct: 2066 VDGPVAVLDFQSLYPSIMIAYNYCYSTCLGRLSSLE-KDFFIKFFHFMFQAIIHFQTLEQ 2124
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
N+ I+P+GV FV KSIR GILP ML+++L TRLMVK SMK YK SL L
Sbjct: 2125 NVNIAPNGVVFVKKSIREGILPCMLKQLLSTRLMVKDSMKLYKEHRSLNRL 2175
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 109 RLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
RL+ D P+ VLDFQSLYPS++IAYNYC+STCLGR+ L
Sbjct: 2063 RLFVDGPVAVLDFQSLYPSIMIAYNYCYSTCLGRLSSL 2100
>gi|258573513|ref|XP_002540938.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
gi|237901204|gb|EEP75605.1| hypothetical protein UREG_00451 [Uncinocarpus reesii 1704]
Length = 1482
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 265/486 (54%), Gaps = 63/486 (12%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
IDA+T + ++ + H E+ Y++V+++EIH +R L P+P DEV IF+
Sbjct: 608 IDAVTQKDSHGFKYSQKKHSRNIQH-ESNYMSVMSLEIHVNTRGTLAPNPEEDEVSCIFW 666
Query: 275 -------YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQ 327
L E D + GI+ + EN+R
Sbjct: 667 CIQSGERSLDASGSENDIQTGILAVADP---------------------------ENIRG 699
Query: 328 --W-DPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSW 384
W D + + E +E +L + +++VR DPDIL GYE+ SW
Sbjct: 700 KVWHDANAEVEEE---------------PSELDLLTKLVDSVRYHDPDILTGYEVHNGSW 744
Query: 385 GYLLERGYV-LGLNLNQELSRI-TEVEKR---NSSRDEVKNTQ-LQMPGRIVINLWRLLR 438
GYL+ER + +L ELSR+ T+ R S R +T +++ GR +IN+WR +R
Sbjct: 745 GYLIERARLKYDYDLCDELSRVKTDSHGRFGKESDRWGFNHTSTIRVTGRHMINIWRAMR 804
Query: 439 HEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRL 497
E+NL YT EN+++HVLH RIP + + +LT W++ T + V +YLI T + +++
Sbjct: 805 GELNLLQYTMENVVFHVLHRRIPHYPFHVLTKWFKS-TKPRNIVKVVNYLIARTKLNLKI 863
Query: 498 IEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMR 557
++ + I RTSE AR+ GI F+ V SRGSQF+VES+M R+++ NF+ +SPS Q
Sbjct: 864 LDANELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENFILISPSKAQVGQQN 923
Query: 558 APESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 617
A E LPL++EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ + G
Sbjct: 924 ALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRI--VDWRGRNKMGF 981
Query: 618 IDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFS 677
ID L+ LQ + ISP+G+ + +R +L KML EIL+TR+MVK MK K
Sbjct: 982 IDYQRQQGLLELLQDQINISPNGIMYTKPEVRKSLLAKMLTEILETRVMVKGGMKANKED 1041
Query: 678 ESLRNL 683
+L+ L
Sbjct: 1042 RALQRL 1047
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 30/33 (90%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPS++IAYNYC+ST LGR+
Sbjct: 938 FYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRI 970
>gi|255086906|ref|XP_002505376.1| predicted protein [Micromonas sp. RCC299]
gi|226520646|gb|ACO66634.1| predicted protein [Micromonas sp. RCC299]
Length = 768
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 207/339 (61%), Gaps = 24/339 (7%)
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR----ITEVEKRN 412
EL FI VR +DPD++ G+EI+ S GYL ER VL + L +E+SR E+++
Sbjct: 2 ELLRGFINTVRSFDPDVIAGFEIQGSSLGYLAERAAVLNIGLLREISRDERRPGAAERQD 61
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
+ + + + GRIVINLWR LR E+ LQSYT E+ + VL R+P K L W
Sbjct: 62 DEYGRLHASGIHVTGRIVINLWRTLRGELKLQSYTLESCAHAVLRRRLPCFPAKTLARWA 121
Query: 473 EHRTHLY---------KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+W + H R R++EQLD + RT+E AR+FGI F+ VLS
Sbjct: 122 RGGDSAIGPGVGIAHQRWRAIRHATSRSNITARMMEQLDLVARTAEQARIFGIDFFSVLS 181
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RGSQ+RVES++LRL+ N+V +SP+ +Q A A E LPL++EPES++Y DP+ VLDFQ
Sbjct: 182 RGSQYRVESMLLRLAHTQNYVMISPNKEQVARQPAMECLPLVMEPESKMYDDPVAVLDFQ 241
Query: 584 SLYPSVIIAYNYCFSTCLGRVEH---------LGVSD-SFPFGCIDLNVSIRSLKKLQQN 633
SLYPS++IAYN C+STC+GRV LGV++ + P G + V+ +
Sbjct: 242 SLYPSMVIAYNLCYSTCMGRVPRDVDGGDGGSLGVAELALPRGLLPSLVNGDG-SEAPPG 300
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+T +P+GV F S R G+LP++L EILDTR+MVKQ++K
Sbjct: 301 VTCAPNGVMFAPHSARPGVLPRLLTEILDTRVMVKQALK 339
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 13/72 (18%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH---------LGVSD-SFPFGCIAS 158
++Y DP+ VLDFQSLYPS++IAYN C+STC+GRV LGV++ + P G + S
Sbjct: 229 KMYDDPVAVLDFQSLYPSMVIAYNLCYSTCMGRVPRDVDGGDGGSLGVAELALPRGLLPS 288
Query: 159 ---RESNQSPPN 167
+ +++PP
Sbjct: 289 LVNGDGSEAPPG 300
>gi|88604878|gb|ABD46759.1| REV3 [Neurospora crassa]
Length = 1926
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 248/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GII+ ++S
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDS 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMVR--------------------- 1013
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1014 -----MVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDRAIQQL 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|336463563|gb|EGO51803.1| hypothetical protein NEUTE1DRAFT_125454 [Neurospora tetrasperma FGSC
2508]
Length = 1928
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 251/462 (54%), Gaps = 58/462 (12%)
Query: 237 TSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGI 289
++ + Y++ +++E+H +R L PDP DEV+ +F+YL + +D GI
Sbjct: 921 SAQDQAQYMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALRGTQAPDDTARGI 980
Query: 290 ILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLER 349
++ ++ L + K + V EL D+++
Sbjct: 981 VVFSEDGSLADRIRKHTSVPVVQETTEL-------------DMMV--------------- 1012
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEV 408
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+
Sbjct: 1013 -----------RMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQ 1061
Query: 409 EKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +
Sbjct: 1062 SNGRIGKDADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHY 1121
Query: 464 SWKLLTCWW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
SWK L+ W+ + L K + +YL R + ++E+ + I RTSE ARL G+ F+ V
Sbjct: 1122 SWKTLSDWYLSDRPKDLDK--VLRYYLTRTRLDLEILEKNELIPRTSEQARLLGVDFFSV 1179
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
SRGSQF+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLD
Sbjct: 1180 FSRGSQFKVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLD 1239
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
FQSLYPSV+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+
Sbjct: 1240 FQSLYPSVMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGM 1297
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ IR +L KML EIL+TR+MVK MK+ K ++++ L
Sbjct: 1298 MYTKPHIRKSLLAKMLTEILETRIMVKSGMKQDKDDKAIQQL 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|256071589|ref|XP_002572122.1| DNA polymerase zeta catalytic subunit [Schistosoma mansoni]
Length = 1518
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 236/419 (56%), Gaps = 48/419 (11%)
Query: 310 FVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE-------RHFVSNEKELFSIF 362
+ S E L S + V+ +DP+ILIGY+IE FSWGYL+E R F L S
Sbjct: 588 WCSTEWNLISWIVYLVQTFDPEILIGYDIERFSWGYLVERANHLGRRTFTRELSRLASDI 647
Query: 363 IE------------NVRQWDPDI-LIGYEIETLSWGYLLERGYVLGLN--LNQELSRITE 407
I + Q P + E S + + +V LN N + +
Sbjct: 648 INCPHCHQCIDKCIKIVQTPPTTPSLNAATERNSPWHFNTQEFVNDLNDLCNCPCNPLYS 707
Query: 408 VEKRNSSRDEVKNTQLQM-------------------PGRIVINLWRLLRHEVNLQSYTF 448
N D N + PGR+V+ WR+L HE++L Y+
Sbjct: 708 TTITNKQSDHANNANINYRRIWPCDSSAGRTGGPFACPGRVVLCFWRILMHEISLYEYSV 767
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
E ++YH+L E +P +++ L W+ + +W T+++++ R +RL+ LD IGRTS
Sbjct: 768 ETVVYHLLKEFMPRYTFAQLNEWYMNMNGANRWRTIDYWIRRSIVNLRLLNTLDLIGRTS 827
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E AR+FGI+FY VLSRGSQ+RVES++ R++R +NF+ SPS+ QRAH APE +PL LEP
Sbjct: 828 EFARIFGIEFYHVLSRGSQYRVESLLCRIARQSNFILPSPSVTQRAHQLAPEGIPLNLEP 887
Query: 569 ESRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF---GCIDLNVSI 624
ES + D PI VLDFQSLYPSVIIAYNYC+ST LG H+ SD F + ++
Sbjct: 888 ESVFFIDGPIAVLDFQSLYPSVIIAYNYCYSTLLG---HVRTSDPFQVFRPNLSEFRIAT 944
Query: 625 RSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
LK++ + + ISP+GV FV KSIR GILP+ML++++ TRLMVK S+K YK ++ L L
Sbjct: 945 NLLKRIGREVNISPNGVVFVKKSIREGILPRMLKQLITTRLMVKDSIKLYKTNKCLNRL 1003
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
PI VLDFQSLYPSVIIAYNYC+ST LG H+ SD F
Sbjct: 896 PIAVLDFQSLYPSVIIAYNYCYSTLLG---HVRTSDPF 930
>gi|350644225|emb|CCD61029.1| DNA polymerase zeta catalytic subunit, putative [Schistosoma
mansoni]
Length = 1257
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/416 (39%), Positives = 233/416 (56%), Gaps = 42/416 (10%)
Query: 310 FVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE-------RHFVSNEKELFSIF 362
+ S E L S + V+ +DP+ILIGY+IE FSWGYL+E R F L S
Sbjct: 327 WCSTEWNLISWIVYLVQTFDPEILIGYDIERFSWGYLVERANHLGRRTFTRELSRLASDI 386
Query: 363 IE------------NVRQWDPDI-LIGYEIETLSWGYLLERGYVLGLN--LNQELSRITE 407
I + Q P + E S + + +V LN N + +
Sbjct: 387 INCPHCHQCIDKCIKIVQTPPTTPSLNAATERNSPWHFNTQEFVNDLNDLCNCPCNPLYS 446
Query: 408 VEKRNSSRDEVKNTQLQM-------------------PGRIVINLWRLLRHEVNLQSYTF 448
N D N + PGR+V+ WR+L HE++L Y+
Sbjct: 447 TTITNKQSDHANNANINYRRIWPCDSSAGRTGGPFACPGRVVLCFWRILMHEISLYEYSV 506
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
E ++YH+L E +P +++ L W+ + +W T+++++ R +RL+ LD IGRTS
Sbjct: 507 ETVVYHLLKEFMPRYTFAQLNEWYMNMNGANRWRTIDYWIRRSIVNLRLLNTLDLIGRTS 566
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E AR+FGI+FY VLSRGSQ+RVES++ R++R +NF+ SPS+ QRAH APE +PL LEP
Sbjct: 567 EFARIFGIEFYHVLSRGSQYRVESLLCRIARQSNFILPSPSVTQRAHQLAPEGIPLNLEP 626
Query: 569 ESRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSL 627
ES + D PI VLDFQSLYPSVIIAYNYC+ST LG V F + ++ L
Sbjct: 627 ESVFFIDGPIAVLDFQSLYPSVIIAYNYCYSTLLGHVRTSDPFQVFRPNLSEFRIATNLL 686
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
K++ + + ISP+GV FV KSIR GILP+ML++++ TRLMVK S+K YK ++ L L
Sbjct: 687 KRIGREVNISPNGVVFVKKSIREGILPRMLKQLITTRLMVKDSIKLYKTNKCLNRL 742
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
PI VLDFQSLYPSVIIAYNYC+ST LG H+ SD F
Sbjct: 635 PIAVLDFQSLYPSVIIAYNYCYSTLLG---HVRTSDPF 669
>gi|119493035|ref|XP_001263773.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119411933|gb|EAW21876.1| DNA polymerase zeta catalytic subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 1686
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 251/471 (53%), Gaps = 41/471 (8%)
Query: 220 PDTTGDYQMGLDNLNEVTS-HVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT 278
P DY + TS + Y++ +++E+H +R +L P+P DE+ IF+
Sbjct: 817 PTQKNDYGFKYSQKGKSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEEDEISCIFW---- 872
Query: 279 CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEI 338
C +D+ + + LP V I S +
Sbjct: 873 CIQSDDQDIDV-----NGNLPGVHVGMIAQGSGDGPTSKLSKALR--------------- 912
Query: 339 ETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLN 397
+E E +L + ++ VR DPDI+ GYE+ SWGYL+ER +
Sbjct: 913 --------IELEHEPTELDLINRLVDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFD 964
Query: 398 LNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
+ ELSR+ +D + + +++ GR +IN+WR +R E+NL YT EN++
Sbjct: 965 ICDELSRVRSQAHGRFGKDADRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQYTMENVV 1024
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
+H+LH RIP +S++ LT W++ VE+++ RV + ++E + I RTSE AR
Sbjct: 1025 FHLLHRRIPHYSYRDLTAWYQSGKPRDLLKVVEYFVSRVQMNLEILESNELIPRTSEQAR 1084
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
L GI F+ V SRGSQF+VES+M R+++ N++ VSPS +Q A E LPL++EP+S
Sbjct: 1085 LLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRRQVGQQNALECLPLVMEPQSDF 1144
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
YT P++VLDFQSLYPS++IAYNYC+ST LGRV + G +D R L+ L+
Sbjct: 1145 YTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVSLWRGRNK--MGFMDYKRQPRVLELLKD 1202
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ I+P+G+ + +R +L +ML EIL+TR+MVK MK K + L+ L
Sbjct: 1203 KINIAPNGMMYAKPEVRQSLLARMLAEILETRVMVKTGMKMDKDDKVLQRL 1253
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+R+ +++ + M P S YT P++VLDFQSLY
Sbjct: 1103 ESLMFRIAKPENYLLVSPSRRQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1158
Query: 125 PSVIIAYNYCFSTCLGRV 142
PS++IAYNYC+ST LGRV
Sbjct: 1159 PSIMIAYNYCYSTFLGRV 1176
>gi|395334320|gb|EJF66696.1| hypothetical protein DICSQDRAFT_176481 [Dichomitus squalens LYAD-421
SS1]
Length = 1668
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 249/452 (55%), Gaps = 64/452 (14%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYL----------YTCPPEEDRKVGIILIGQ 294
+TVLA+E+ A S+ PDP DEV A+FY +TC GII++
Sbjct: 819 MTVLALEVFAPSKDDHLPDPNDDEVAAVFYSFQSHDRDAVEPFTC------DSGIIVV-- 870
Query: 295 ESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSN 354
N +L + NV+ FV +
Sbjct: 871 ------------------NSDQLNPRRLRNVKA----------------------EFVDS 890
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E +L + I+ + DPD+L G+E++ SWGYL RG GL++ +++SR
Sbjct: 891 ELDLLNRLIDVILDLDPDVLSGWEVQAASWGYLSARGRNYGLDVGEQISR-APGRTSGGG 949
Query: 415 RDE--VKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D+ +K T ++ GR V+NLWR++R E YTFEN+++ +L R P +S + LT W
Sbjct: 950 YDQWGMKTTSTFKVIGRHVLNLWRIMRSEQTFNIYTFENVVFQLLRRRTPWYSPRTLTEW 1009
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ + ++ R + ++ +++ + + + +E AR+FG+ F+ VLSRGSQ++VE
Sbjct: 1010 HNSAVPGHTDRVLRYFARRTSMVLEMLDVAEVVTKNAEFARVFGVDFFSVLSRGSQYKVE 1069
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S M R+++ +FV +SPS + A E +PLI+EP S Y+ P++VLDFQSLYPS++I
Sbjct: 1070 SFMFRIAKPESFVLLSPSKQDVGKQNAAECMPLIMEPLSAFYSSPLVVLDFQSLYPSIMI 1129
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
AYNYC+STCLGR+ ++ FG DL L LQ+++ ++P+G+ +V +S+R G
Sbjct: 1130 AYNYCYSTCLGRITDF--KGTYKFGVTDLRQPAGLLDTLQEHINVAPNGIMYVKESVRKG 1187
Query: 652 ILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+L +ML E+L+TR+MVKQ+MK K ++LR +
Sbjct: 1188 LLGRMLTELLETRVMVKQAMKGAKDDKALRRI 1219
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRE 160
Y+ P++VLDFQSLYPS++IAYNYC+STCLGR+ ++ FG R+
Sbjct: 1110 FYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRITDF--KGTYKFGVTDLRQ 1158
>gi|88866509|gb|ABD57304.1| REV3 [Neurospora crassa]
Length = 1581
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 247/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GI++ ++
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALGGTQAPDDTARGIVVFSEDD 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMVR--------------------- 1013
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1014 -----MVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDRAIQQL 1339
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|406868498|gb|EKD21535.1| DNA polymerase zeta catalytic subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 2719
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 251/483 (51%), Gaps = 57/483 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID T ++ D H E Y++ +++E+H +R P+P DEV+ +F+
Sbjct: 871 IDGPTQKNKHGFKYTQDQKTTSVKH-EAQYMSTMSLEVHINTRGNFVPNPEEDEVQCVFW 929
Query: 275 --------YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVR 326
L C + +G +++ ++ V T+ I R
Sbjct: 930 CLQSDDEGLLNNCA-VDGTHLGAVVLSEDG----VVTRKI------------------AR 966
Query: 327 QWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGY 386
Q DI S E +L +E VR +DPDIL GYE+ SWGY
Sbjct: 967 QISIDI-----------------QEESTELDLMIRMVEIVRNYDPDILTGYEVHGGSWGY 1009
Query: 387 LLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHE 440
L+ER + NL E SR+ +D K + +++ GR +IN+WR +R E
Sbjct: 1010 LIERARLKYDYNLCDEFSRMKAQSHGRFGKDSDKWGFNNTSTIRVTGRHMINIWRAMRSE 1069
Query: 441 VNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQ 500
+NL YT EN+ +H+LH RIP +W LT W+ + V HY RV + L++
Sbjct: 1070 LNLLQYTLENVAFHLLHRRIPHFTWADLTRWYVNGKTRDLAKVVNHYATRVQLDLELLDA 1129
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+ I RTSE ARL G+ F+ V SRGSQF+VES+M R+++ NF+ VSPS KQ A E
Sbjct: 1130 NELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIAKPENFMLVSPSRKQVGGQNALE 1189
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
LPL++EP+S Y P++VLDFQSLYPSV+IAYNYC+ST LGR+ + G +
Sbjct: 1190 CLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI--VNWRGKSKMGFAEY 1247
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
R L+ L+ ++ I+P+G+ + IR +L KML EIL+TR+MVK MK K +SL
Sbjct: 1248 QRQQRLLELLKDHINIAPNGIMYAKPEIRKSLLAKMLGEILETRVMVKSGMKVDKDDKSL 1307
Query: 681 RNL 683
+ L
Sbjct: 1308 QRL 1310
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y P++VLDFQSLYPSV+IAYNYC+ST LG
Sbjct: 1176 SPSRKQVGGQNALECLPLVMEPQSA----FYNSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1231
Query: 141 RV 142
R+
Sbjct: 1232 RI 1233
>gi|68236020|gb|AAY88346.1| REV3 [Neurospora crassa]
Length = 1926
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 247/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GI++ ++
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALGGTQAPDDTARGIVVFSEDD 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMV---------------------- 1012
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1013 ----RMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDRAIQQL 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|449522574|ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
Length = 1591
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 255/468 (54%), Gaps = 76/468 (16%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L+VE+ A R L+PDP +D VK I + T + ++LI
Sbjct: 1165 LTLLSVEVQAECRGDLRPDPQFDAVKMIALTIQT---DSGPVFEVVLI------------ 1209
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
T I++ ++ + GY L H EK LF F++
Sbjct: 1210 -------------LCTKIDSSKR-----------NRYGIGYKLLVHH--EEKCLFQSFMK 1243
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR-------------------- 404
+ DPDILIG++I+ S GYL ER LG+NL ++SR
Sbjct: 1244 IIYLTDPDILIGWDIQGSSLGYLAERASQLGINLLNKISRTPDEAKMLDGDSKTHTEIPE 1303
Query: 405 --ITEVEKRNSS-------RDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
++E+ +S+ DE T + + GRIV+NLWRL+R+EV L YT E +
Sbjct: 1304 NLVSELVDFDSTVVEDMIIEDEWGRTHASGIHIGGRIVLNLWRLMRNEVKLNIYTLEAVA 1363
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
VL ++P ++LT W+ ++ +E+ + R ++LI QLD I RTSE+AR
Sbjct: 1364 EAVLRRKLPYIHHRVLTQWFNSGPRQARFRCIEYMMERAKLNLQLISQLDMINRTSELAR 1423
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+FGI+F+ VLSRGSQ+RVES++LRL+ N++AVSP Q A A E LPL++EPES
Sbjct: 1424 VFGIEFFSVLSRGSQYRVESMLLRLAHSQNYLAVSPGNLQVASQPAMECLPLVMEPESGF 1483
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y DP++VLDFQSLYPS+IIAYN CF TCLG+V V+ G I + + L +L+
Sbjct: 1484 YADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKVNT---LGVISYSPEQQVLNELKD 1540
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+ +P+GV +V +R GILP++L+EIL TR+MVKQ MK+ S+ +
Sbjct: 1541 QILFTPNGVMYVTPKVRKGILPRLLEEILLTRIMVKQEMKKLAPSQKV 1588
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y DP++VLDFQSLYPS+IIAYN CF TCLG+V
Sbjct: 1483 FYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKV 1515
>gi|426201443|gb|EKV51366.1| hypothetical protein AGABI2DRAFT_182321 [Agaricus bisporus var.
bisporus H97]
Length = 1480
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 254/451 (56%), Gaps = 52/451 (11%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+T+L+VE+ A + P+P D + I Y + ED G+I I +
Sbjct: 628 MTILSVEVMAPTHGKNVPNPESDPI-CIAVYGFQVAGTEDVHTGVIAI-----------Q 675
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
IQ+N P + + +E V E +L + +
Sbjct: 676 NIQLN--------------------PRRIRDFHLE-----------IVDTELDLLNRLSD 704
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSR-DEVKNTQL 423
V + DPDIL G+E++ SWGYL R + LSR ++ ++ R D + +
Sbjct: 705 IVAELDPDILTGWEVQQASWGYLWLRAKHYDFDFQDFLSRAPPLKAGSNDRWDGQTTSNI 764
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR--THLYKW 481
++ GR V+N+WR++R E+ L SYT N+ +HV+ +R+P +S+ L+ W++ +H+
Sbjct: 765 KVAGRHVLNVWRIMRSELALTSYTLSNVAFHVMRQRVPFYSFATLSRWYDSTGPSHMVAL 824
Query: 482 MTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
M HYLI R ++++E + + +T+E AR+FG+ F+ V+SRGSQF+VES M R+++
Sbjct: 825 M---HYLIQRNCATLQILEATELVTKTAEFARIFGVDFHSVISRGSQFKVESFMFRIAKS 881
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
NFV +SPS A E +PLI+EP S YT P++VLDFQSLYPSV+IAYNYC+STC
Sbjct: 882 ENFVLLSPSKSDVGLQNAAECMPLIMEPMSAFYTSPLVVLDFQSLYPSVMIAYNYCYSTC 941
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGR++ ++ FG +L++ L LQ+++T++P+G+ +V ++R G+L +ML E+
Sbjct: 942 LGRIKPF--QGNYKFGVTNLDLGPGILDALQEHITVAPNGIMYVKSNVRKGLLGRMLVEL 999
Query: 661 LDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
L+TR+MVKQ++K K ++L + + L
Sbjct: 1000 LNTRVMVKQALKSAKSDKALARVLHARQLAL 1030
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 32/34 (94%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
YT P++VLDFQSLYPSV+IAYNYC+STCLGR++
Sbjct: 913 FYTSPLVVLDFQSLYPSVMIAYNYCYSTCLGRIK 946
>gi|449454163|ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 255/468 (54%), Gaps = 76/468 (16%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L+VE+ A R L+PDP +D VK I + T + ++LI
Sbjct: 1165 LTLLSVEVQAECRGDLRPDPQFDAVKMIALTIQT---DSGPVFEVVLI------------ 1209
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
T I++ ++ + GY L H EK LF F++
Sbjct: 1210 -------------LCTKIDSSKR-----------NRYGIGYKLLVHH--EEKCLFQSFMK 1243
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR-------------------- 404
+ DPDILIG++I+ S GYL ER LG+NL ++SR
Sbjct: 1244 IIYLTDPDILIGWDIQGSSLGYLAERASQLGINLLNKISRTPDEAKMLDGDSKTHTEIPE 1303
Query: 405 --ITEVEKRNSS-------RDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
++E+ +S+ DE T + + GRIV+NLWRL+R+EV L YT E +
Sbjct: 1304 NLVSELVDFDSTVVEDMIIEDEWGRTHASGIHIGGRIVLNLWRLMRNEVKLNIYTLEAVA 1363
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
VL ++P ++LT W+ ++ +E+ + R ++LI QLD I RTSE+AR
Sbjct: 1364 EAVLRRKLPYIHHRVLTQWFNSGPRQARFRCIEYMMERAKLNLQLISQLDMINRTSELAR 1423
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+FGI+F+ VLSRGSQ+RVES++LRL+ N++AVSP Q A A E LPL++EPES
Sbjct: 1424 VFGIEFFSVLSRGSQYRVESMLLRLAHSQNYLAVSPGNLQVASQPAMECLPLVMEPESGF 1483
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y DP++VLDFQSLYPS+IIAYN CF TCLG+V V+ G I + + L +L+
Sbjct: 1484 YADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKVN---TLGVISYSPEQQVLNELKD 1540
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+ +P+GV +V +R GILP++L+EIL TR+MVKQ MK+ S+ +
Sbjct: 1541 QILFTPNGVMYVTPKVRKGILPRLLEEILLTRIMVKQEMKKLAPSQKV 1588
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y DP++VLDFQSLYPS+IIAYN CF TCLG+V
Sbjct: 1483 FYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKV 1515
>gi|88604882|gb|ABD46761.1| REV3 [Neurospora crassa]
Length = 1926
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 243/445 (54%), Gaps = 58/445 (13%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GII+ ++S
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDS 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMVR--------------------- 1013
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1014 -----MVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKE 673
R +L KML EIL+TR+MVK MK+
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQ 1329
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|303280714|ref|XP_003059649.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458304|gb|EEH55601.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 793
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 50/381 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV----E 409
+E+ L FI +V DPD+L G+EI+ S GYL +R LG+ L +++SR + E
Sbjct: 1 DERALLRGFIAHVLARDPDVLCGFEIQGASVGYLRDRAAKLGIGLLRDVSRAASLPGAAE 60
Query: 410 KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
+++ + + L + GRIVINLWR+LR E+ LQSYT E VL R+P + + L+
Sbjct: 61 RQDDEYGRLHASGLHVTGRIVINLWRVLRTELKLQSYTMEACARAVLRRRLPRFTHRTLS 120
Query: 470 CWW--------------------------EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDF 503
W H +W ++H R + R++EQLD
Sbjct: 121 RWACANDDDFNGFNGGGGGGGNNGTTTVVAAAAH-QRWRAIDHASSRAVVVARMLEQLDL 179
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ RTSE AR+FGI F+ VLSRGSQ+RVES++LRL+ N++AVSPS +Q A A E LP
Sbjct: 180 VARTSEQARIFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAVSPSKEQVARQPAMECLP 239
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR-------------VEHLGVS 610
L++EPES++Y+DP+ VLDFQSLYPS++IAYN CFSTCLGR LGV
Sbjct: 240 LVMEPESKMYSDPVAVLDFQSLYPSMVIAYNLCFSTCLGRAPRESPPERHLVDAAKLGVL 299
Query: 611 DSFPFG------CIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTR 664
D+F ++L + +P+G F S R G+LP++L EILDTR
Sbjct: 300 DAFALAPGVLPSLVELGARGGGGGGGGGGVYCAPNGAVFATPSARPGVLPRLLTEILDTR 359
Query: 665 LMVKQSMKEYKFSESLRNLTM 685
+MVK ++K S R +
Sbjct: 360 VMVKAALKRAPASAKARKRAL 380
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 13/59 (22%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR-------------VEHLGVSDSFPFG 154
++Y+DP+ VLDFQSLYPS++IAYN CFSTCLGR LGV D+F
Sbjct: 247 KMYSDPVAVLDFQSLYPSMVIAYNLCFSTCLGRAPRESPPERHLVDAAKLGVLDAFALA 305
>gi|88604886|gb|ABD46763.1| REV3 [Neurospora crassa]
Length = 1926
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 243/445 (54%), Gaps = 58/445 (13%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GII+ ++S
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDS 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMVR--------------------- 1013
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1014 -----MVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKE 673
R +L KML EIL+TR+MVK MK+
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQ 1329
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|358369172|dbj|GAA85787.1| DNA polymerase zeta catalytic subunit [Aspergillus kawachii IFO 4308]
Length = 1675
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 251/450 (55%), Gaps = 42/450 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ Y++++++E+H +R +L P+P DE+ +F+ L + +ED + G
Sbjct: 823 QTQYMSIMSLEVHVNTRGVLLPNPEEDEITCVFWCLQS--EDEDLDANGTVPG------- 873
Query: 301 VRTKPIQMNFVS-NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
+ + +S +E + T + I +E ET +E +L
Sbjct: 874 -----VHVGMISQSEHDRPDTKASKA------LRIDWEHET-------------SELDLI 909
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDEV 418
+ ++ VR DPDI+ GYE+ SWGYL+ER ++ ELSR+ +D
Sbjct: 910 NRVVDIVRWHDPDIITGYEVHNSSWGYLIERARKKYDFDICDELSRVKSQAHGRFGKDAD 969
Query: 419 K-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+ + +++ GR +IN+WR +R E+NL YT EN+ +H+LH R+P +S++ LT W+
Sbjct: 970 RWGFNHTSSIRVTGRHMINIWRAMRGELNLLQYTQENVAFHLLHRRVPHYSFQDLTDWYR 1029
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
VE+++ RV + ++E + I RTSE ARL GI F+ V SRGSQF+VES+
Sbjct: 1030 SGKPRNILKVVEYFVSRVQMDLEILESNELIPRTSEQARLLGIDFFSVFSRGSQFKVESL 1089
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
M R+++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSLYPS++IAY
Sbjct: 1090 MFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLVVLDFQSLYPSIMIAY 1149
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYC+ST LGR + G D R L+ LQ + I+P+G+ + +R +L
Sbjct: 1150 NYCYSTFLGRAHQWRGRNK--MGFTDYKRQPRILELLQDKINIAPNGMIYAKPEVRKSLL 1207
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1208 ARMLAEILETRVMVKNGMKLDKDDKALQRL 1237
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1087 ESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLVVLDFQSLY 1142
Query: 125 PSVIIAYNYCFSTCLGRVEH 144
PS++IAYNYC+ST LGR
Sbjct: 1143 PSIMIAYNYCYSTFLGRAHQ 1162
>gi|409083516|gb|EKM83873.1| hypothetical protein AGABI1DRAFT_32464 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1543
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 252/443 (56%), Gaps = 52/443 (11%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+T+L+VE+ A + P+P D + I Y + +D G+I I +
Sbjct: 692 MTILSVEVMAPTHGKNVPNPESDPI-CIAVYGFQVAGTDDVHTGVIAI-----------Q 739
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
IQ+N P + + +E V E +L + +
Sbjct: 740 NIQLN--------------------PRRIRDFHLE-----------IVDTELDLLNRLSD 768
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSR-DEVKNTQL 423
V + DPDIL G+E++ SWGYL R + LSR ++ ++ R D + +
Sbjct: 769 IVAELDPDILTGWEVQQASWGYLWLRAKHYDFDFQDFLSRAPPLKAGSNDRWDRQTTSNI 828
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR--THLYKW 481
++ GR V+N+WR++R E+ L SYT N+ +HV+ +R+P +S+ L+ W++ +H+
Sbjct: 829 KVAGRHVLNVWRIMRSELALTSYTLSNVAFHVMRQRVPFYSFATLSRWYDSTGPSHMVAL 888
Query: 482 MTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
M HYLI R ++++E + + +T+E AR+FG+ F+ V+SRGSQF+VES M R+++
Sbjct: 889 M---HYLIQRNCTTLQILEATELVTKTAEFARIFGVDFHSVISRGSQFKVESFMFRIAKS 945
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
NFV +SPS A E +PLI+EP S YT P++VLDFQSLYPSV+IAYNYC+STC
Sbjct: 946 ENFVLLSPSKSDVGLQNAAECMPLIMEPMSAFYTSPLVVLDFQSLYPSVMIAYNYCYSTC 1005
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGR++ ++ FG +L++ L LQ+++T++P+G+ +V ++R G+L +ML E+
Sbjct: 1006 LGRIKPF--QGNYKFGVTNLDLGPGILDALQEHITVAPNGIMYVKSNVRKGLLGRMLVEL 1063
Query: 661 LDTRLMVKQSMKEYKFSESLRNL 683
L+TR+MVKQ++K K ++ R L
Sbjct: 1064 LNTRVMVKQALKSAKSDKAARVL 1086
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 32/34 (94%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
YT P++VLDFQSLYPSV+IAYNYC+STCLGR++
Sbjct: 977 FYTSPLVVLDFQSLYPSVMIAYNYCYSTCLGRIK 1010
>gi|409051564|gb|EKM61040.1| hypothetical protein PHACADRAFT_204189 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1614
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 256/453 (56%), Gaps = 39/453 (8%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+T L++E+ A SR PDP DE AIFY LY +S P V
Sbjct: 724 MTALSIEVFAPSREDKLPDPGLDEAVAIFYALY-----------------DSNCPRVD-- 764
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+ E E +EN Q+DP L + E+ V +E +L + ++
Sbjct: 765 ----HGTPFECETGVLLLENP-QFDPLRLRDWRFES-----------VESELDLINHVVD 808
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-TEVEKRNSSRDEVKNTQ- 422
V+ DPDIL+G++++ SW YL R GL+ +++SR S + ++ T
Sbjct: 809 VVQDLDPDILVGWDVQAGSWSYLSARAGTYGLDFGEQISRAPGRAHAVQSDQWGLRTTST 868
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWM 482
++ GR V+NLWR++R E++L SY+ EN ++HVL R P HS LT W+ + +
Sbjct: 869 FRVIGRHVLNLWRIMRSELSLSSYSLENAVFHVLRRRTPRHSPGTLTEWYHSKIPEHTSR 928
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
+ + L R T ++ ++E + I + SE AR+FG+ F+ VLSRGSQF+VES M R+++ +
Sbjct: 929 LIRYCLARATIVVEMLEVAEVITKNSEFARVFGVDFFSVLSRGSQFKVESFMFRIAKPES 988
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
FV +SPS + A E +PLI+EP S Y+ P++VLDFQSLYPSV+IAYNYC+STCLG
Sbjct: 989 FVLLSPSKQDVGKQNAAECMPLIMEPLSAFYSSPLVVLDFQSLYPSVMIAYNYCYSTCLG 1048
Query: 603 RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILD 662
RV + FG +L+ LK L+ + ISP+G+ FV ++R G+L +ML E+LD
Sbjct: 1049 RVVDFKGQNK--FGVSELHQPPELLKTLEDYINISPNGMVFVKPAVRKGLLGRMLTELLD 1106
Query: 663 TRLMVKQSMKEYKFSESLRNLTMLNSMLLIPYR 695
TR+MVKQ+MK K +++ L+ + + YR
Sbjct: 1107 TRVMVKQAMKRVKDNKAYLTLSKYYAYTHLGYR 1139
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y+ P++VLDFQSLYPSV+IAYNYC+STCLGRV + F
Sbjct: 1018 FYSSPLVVLDFQSLYPSVMIAYNYCYSTCLGRVVDFKGQNKF 1059
>gi|322709541|gb|EFZ01117.1| hypothetical protein MAA_03713 [Metarhizium anisopliae ARSEF 23]
Length = 1698
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 243/459 (52%), Gaps = 60/459 (13%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV----------GII 290
E Y++ +++EIH +R P+P DEV+ IF+ C +E + GI+
Sbjct: 854 EVQYMSTMSLEIHVNTRGKYVPNPEEDEVQCIFW---VCKSDEVVGISQNSPGAIHTGIV 910
Query: 291 LIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERH 350
++ Q+ + + K + + EL
Sbjct: 911 VLSQDGKESQAMRKSTGSDIIEESSEL--------------------------------- 937
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVE 409
+L +E VR +DPDIL GYE+ + SWGYL+ER NL E SR+
Sbjct: 938 ------DLIVRMVEIVRTYDPDILTGYEVHSSSWGYLIERARCKYDYNLCDEFSRMKSDS 991
Query: 410 ----KRNSSRDEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ S R T +++ GR +IN+WR +R E+NL Y+ EN+ +H+LH R+P +S
Sbjct: 992 HGRFGKQSDRWGFNTTSTIRVTGRHMINIWRAMRGELNLLQYSLENVAWHLLHRRVPHYS 1051
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
W+ LT W++ + +Y R I+++E + I RTSE ARL G+ F+ V SR
Sbjct: 1052 WRTLTSWYKSGKSSDLGRVIRYYQTRTLMDIQILETNELIPRTSEQARLLGVDFFSVFSR 1111
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP+S Y P++VLDFQS
Sbjct: 1112 GSQFKVESIMFRIAKPENFILVSPSRKQVGSQNALECLPLVMEPQSAFYNSPLLVLDFQS 1171
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPSV+IAYNYC+ST LGR+ + + F + +L L+ + I+P+G+ +V
Sbjct: 1172 LYPSVMIAYNYCYSTFLGRITNWRGVNKMGFTEYKRQEGLLAL--LKDYINIAPNGMMYV 1229
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
IR +L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1230 KSEIRKSLLAKMLTEILETRVMVKSGMKSDKDDKVLQQL 1268
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK ++++ + M P S+ Y P++VLDFQSLY
Sbjct: 1118 ESIMFRIAKPENFILVSPSRKQVGSQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1173
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1174 PSVMIAYNYCYSTFLGRI 1191
>gi|407918361|gb|EKG11632.1| hypothetical protein MPH_11125 [Macrophomina phaseolina MS6]
Length = 1629
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 250/452 (55%), Gaps = 54/452 (11%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRK---VGIILIGQESE 297
E Y++++++E+H +R PDPA DE+ IF+ C ++D + +G++ +
Sbjct: 872 EAQYMSIMSLEVHVNTRGTFLPDPAEDEIACIFW----CVQDDDAQSVQIGVLALSSSEG 927
Query: 298 LPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKE 357
+ + + F+ D+ + YE +E +
Sbjct: 928 I----------------AKKMARFL--------DVDVQYE---------------EDELD 948
Query: 358 LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRD 416
L + ++ VR++DPDIL GYE+ SWGYL+ER + NL E SR+ ++
Sbjct: 949 LLNKMVDIVREFDPDILTGYEVHNSSWGYLIERARLQYEYNLCDEFSRMKSQSHGRFGKE 1008
Query: 417 E-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
+ +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + + LT W
Sbjct: 1009 ADRWGFTHTSTIRITGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHFTHQDLTKW 1068
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
++ V +++ RV + ++E + I RTSE ARL G+ F+ V+SRGSQF+VE
Sbjct: 1069 YQSGKPRDLAKVVGYFVSRVQINLDILEANEIIPRTSEQARLLGVDFFSVISRGSQFKVE 1128
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S+M R+++ NFV SPS KQ A E LPL++EP+S Y P++VLDFQSLYPSV+I
Sbjct: 1129 SLMFRIAKPENFVLPSPSRKQVGQQNALECLPLVMEPQSAFYNSPLLVLDFQSLYPSVMI 1188
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
AYNYC+ST LGR+ G G D R L+ +Q + ++P+G+ +V +R
Sbjct: 1189 AYNYCYSTFLGRI--TGWRGKNKMGFTDFKREPRLLEIVQDYINVAPNGMMYVKPEMRKS 1246
Query: 652 ILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1247 LLAKMLGEILETRVMVKSGMKVDKDDKMLQQL 1278
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y P++VLDFQSLY
Sbjct: 1128 ESLMFRIAKPENFVLPSPSRKQVGQQNALECLPLVMEPQSA----FYNSPLLVLDFQSLY 1183
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1184 PSVMIAYNYCYSTFLGRI 1201
>gi|320036527|gb|EFW18466.1| DNA polymerase zeta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1677
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 256/449 (57%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E +Y++V+++E+H +R L P+P DE+ IF+ C DR +G+ + S+ E
Sbjct: 831 EAHYMSVMSLEVHVNTRCTLAPNPEEDEISCIFW----CIQSGDRSLGV---NEPSD--E 881
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
V+T + + E E + I ++D + I E S+E ++ +
Sbjct: 882 VQTGVLAVA----ETESIAAKI----RYDTNAEIEEE---------------SSELDVLT 918
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI-TEVEKR---NSSR 415
++ VR +DPDIL GYE+ SWGYL+ER V +L ELSR+ T+ R S R
Sbjct: 919 KLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYDYDLCDELSRVKTDSHGRFGKESDR 978
Query: 416 DEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+T +++ GR +IN+WR +R E+NL YT EN+ +H+LH+RIP + + LT W++
Sbjct: 979 WGFNHTSTIRVTGRHMINIWRAMRSELNLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKS 1038
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
V +++ R + +++ + I RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 1039 TKPRNLVKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLM 1098
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SPS Q A E LPL++EP+S Y P++VLDFQSLYPSV+IAYN
Sbjct: 1099 FRIAKPENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYN 1158
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+ST LGR+ + G ID L L+ + I+P+G+ + +R +L
Sbjct: 1159 YCYSTFLGRI--VDWRGRNKMGFIDYQRQPGLLGLLESQINIAPNGIMYTRPEVRKSLLA 1216
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K +L+ L
Sbjct: 1217 KMLTEILETRVMVKGGMKANKEDRALQRL 1245
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P++VLDFQSLYPSV+IAYNYC+ST LGR+
Sbjct: 1136 FYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI 1168
>gi|303313149|ref|XP_003066586.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106248|gb|EER24441.1| DNA polymerase zeta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1679
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 256/449 (57%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E +Y++V+++E+H +R L P+P DE+ IF+ C DR +G+ + S+ E
Sbjct: 833 EAHYMSVMSLEVHVNTRCTLAPNPEEDEISCIFW----CIQSGDRSLGV---NEPSD--E 883
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
V+T + + E E + I ++D + I E S+E ++ +
Sbjct: 884 VQTGVLAVA----ETESIAAKI----RYDTNAEIEEE---------------SSELDVLT 920
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI-TEVEKR---NSSR 415
++ VR +DPDIL GYE+ SWGYL+ER V +L ELSR+ T+ R S R
Sbjct: 921 KLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYDYDLCDELSRVKTDSHGRFGKESDR 980
Query: 416 DEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+T +++ GR +IN+WR +R E+NL YT EN+ +H+LH+RIP + + LT W++
Sbjct: 981 WGFNHTSTIRVTGRHMINIWRAMRSELNLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKS 1040
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
V +++ R + +++ + I RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 1041 TKPRNLVKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLM 1100
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SPS Q A E LPL++EP+S Y P++VLDFQSLYPSV+IAYN
Sbjct: 1101 FRIAKPENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYN 1160
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+ST LGR+ + G ID L L+ + I+P+G+ + +R +L
Sbjct: 1161 YCYSTFLGRI--VDWRGRNKMGFIDYQRQPGLLGLLESQINIAPNGIMYTRPEVRKSLLA 1218
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K +L+ L
Sbjct: 1219 KMLTEILETRVMVKGGMKANKEDRALQRL 1247
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P++VLDFQSLYPSV+IAYNYC+ST LGR+
Sbjct: 1138 FYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI 1170
>gi|324500783|gb|ADY40359.1| DNA polymerase zeta catalytic subunit, partial [Ascaris suum]
Length = 1598
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 257/469 (54%), Gaps = 53/469 (11%)
Query: 234 NEVTSHVENYYLTVLAVEIHAISR-ALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI 292
N T H + +L V++VEI A++R + P+P +D V IFY V + +
Sbjct: 794 NPDTDHTDLRHLCVMSVEIIALTRPSFPVPEPQFDAVVGIFY-----------TVSLDVC 842
Query: 293 GQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV 352
QE+ E E L ++ ++ G I F
Sbjct: 843 MQENAFDE-------------EWALLNSADMHIAP------SGDRITCFE---------- 873
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+E LF F VR+ DPD+++GY+ SWGYL+ER LG NL LSR +E
Sbjct: 874 -DECALFDAFANIVRRIDPDMVVGYDTRRYSWGYLVERSIALGRNLLSALSRYP-IEVSE 931
Query: 413 SSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
R +V GRI++N+WR++RHE+ L+ Y+ ++ VL+ R P S + ++
Sbjct: 932 YYRPDVPKFDFNPSPRGRILLNVWRIIRHELALRCYSRSTVIQTVLNRRFPQFSNQTISE 991
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
W + + H+++ ++++ QLD RT+EMAR++GIQF EVLSRGSQFRV
Sbjct: 992 WISSDEKCLVDVAIRHFMLCARLNLQIMSQLDLFTRTAEMARVYGIQFAEVLSRGSQFRV 1051
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
ES++LRL+R + A S S QR M APE LPL +EPES Y DP+IVLDFQSLYPS++
Sbjct: 1052 ESMLLRLARRHRLTAPSVSPAQRTAMCAPEVLPLNMEPESGYYRDPVIVLDFQSLYPSIV 1111
Query: 591 IAYNYCFSTCLGRVEHL------GVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVA 642
IAYNYCFSTCLG+V + G +DS G + ++ + + + N+ +SP+G A
Sbjct: 1112 IAYNYCFSTCLGKVSRMDDATVTGFADSMELGGLVYSLPVEDVASMVDNGNVHVSPTGSA 1171
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
F KS+R GI+P ML EIL+TR+MVK++ K+YK S L + M L
Sbjct: 1172 FCKKSVRRGIMPIMLDEILNTRIMVKKAAKDYKDSRRLARILDARQMAL 1220
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 6/50 (12%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL------GVSDSFPFG 154
Y DP+IVLDFQSLYPS++IAYNYCFSTCLG+V + G +DS G
Sbjct: 1094 YRDPVIVLDFQSLYPSIVIAYNYCFSTCLGKVSRMDDATVTGFADSMELG 1143
>gi|242813002|ref|XP_002486077.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714416|gb|EED13839.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1672
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 252/449 (56%), Gaps = 42/449 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ Y++V+++E+H +R L P+P DE+ +F+ L + +ED V L G
Sbjct: 818 QTQYMSVMSLEVHVNTRESLAPNPEEDEISCVFWSLRS--DDEDVDVNSHLEG------- 868
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+ + ++ D+L+ + +E ++E +L +
Sbjct: 869 -----VHLGILAQPA---------------DVLV-----PVAASLSIEVQTEASELDLIT 903
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK 419
++ VR DPDI+ GYE+ SWGYL+ER V +L ELSR+ +D +
Sbjct: 904 SLVDIVRSHDPDIITGYEVHNSSWGYLIERARVKYEYDLCNELSRVKTSAHGRFGKDSDR 963
Query: 420 -----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+ + + GR +IN+WR +R E+ L YT EN+++H+LH RIP + ++ LT W+
Sbjct: 964 WGFNHTSSISVTGRHMINIWRAMRSELTLLGYTMENVVFHLLHRRIPHYPFRELTRWFTG 1023
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+E+YL RV + +++ + I RTSE ARL G+ F+ V SRGSQF+VES+M
Sbjct: 1024 SKPRDMMKVMEYYLSRVQLDLEILDTNELIPRTSEQARLLGVDFFSVFSRGSQFKVESLM 1083
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ V+PS KQ A E LPL++EP+S YT P++VLDFQSLYPS+IIAYN
Sbjct: 1084 FRIAKPENFMLVTPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIIIAYN 1143
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+ST LGR+++ G ++ R L+ L+ ++ I+P+G+ + IR +L
Sbjct: 1144 YCYSTFLGRLDNW--RGRGKMGFMEYERQERILELLKDHVNIAPNGMIYAKPEIRKSLLA 1201
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1202 RMLSEILETRVMVKSGMKADKDDKTLQQL 1230
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 9/80 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ +P+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1080 ESLMFRIAKPENFMLVTPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1135
Query: 125 PSVIIAYNYCFSTCLGRVEH 144
PS+IIAYNYC+ST LGR+++
Sbjct: 1136 PSIIIAYNYCYSTFLGRLDN 1155
>gi|358393560|gb|EHK42961.1| hypothetical protein TRIATDRAFT_294114 [Trichoderma atroviride IMI
206040]
Length = 1556
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 252/469 (53%), Gaps = 51/469 (10%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID T D++ + H E Y++++++E+H +R P+P DEV+ IF+
Sbjct: 710 IDGPTQKDKYDFKYSQKQPSSAVPH-EAQYMSIMSLEVHVHTRGNFVPNPEEDEVQCIFW 768
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ ++D + I V S+E +L + IE VR +DPD+L
Sbjct: 769 HW-----KDDEAIATDRIRHAVSDEVVHE--------SSELDLLNRMIEIVRVYDPDVLT 815
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL 394
GYE+ SWGYL+ER + + +L + F Q + E+ WG+
Sbjct: 816 GYEVHGSSWGYLIERARLKYDYDLCNEFSRMKAQSKGR----FGKESDQWGF-------- 863
Query: 395 GLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYH 454
N++ + +++ GR +IN+WR +R EVNL YT EN+++H
Sbjct: 864 -----------------NTT------STIRITGRHMINIWRAMRSEVNLLQYTMENVVWH 900
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+LH RIP +SW+ LT W + + +Y R ++++E + I RTSE ARL
Sbjct: 901 LLHRRIPHYSWRSLTSWLQSGKARDLNRLLRYYRTRSRLDLKILESNELISRTSEQARLL 960
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ F+ V SRGSQF+VESIM R+++ NF+ VSPS KQ A E LPL++EP+S Y+
Sbjct: 961 GVDFFSVFSRGSQFKVESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVMEPQSSFYS 1020
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
P++VLDFQSLYPSV+IAYNYC+ST LGR+ F + +L L+ ++
Sbjct: 1021 SPLVVLDFQSLYPSVMIAYNYCYSTFLGRITDWRGKSKMGFTEYKRQDGLLTL--LEDHI 1078
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
I+P+G+ +V +R +L KML EIL+TR+MVK MK + ++L+ L
Sbjct: 1079 NIAPNGMMYVKSEVRKSLLAKMLTEILETRIMVKNGMKTDQDDKTLQQL 1127
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P SS Y+ P++VLDFQSLY
Sbjct: 977 ESIMFRIAKPENFMLVSPSRKQVGQQNALECLPLVMEPQSS----FYSSPLVVLDFQSLY 1032
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1033 PSVMIAYNYCYSTFLGRI 1050
>gi|396467820|ref|XP_003838034.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
gi|312214599|emb|CBX94590.1| similar to DNA polymerase zeta catalytic subunit [Leptosphaeria
maculans JN3]
Length = 1679
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 255/454 (56%), Gaps = 55/454 (12%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEE----DR-KVGIILIGQE 295
E Y++++++E+H SR L PDP DE++ IF+ + EE DR + GI+ + ++
Sbjct: 801 ETQYMSIMSLEVHVNSRGSLVPDPTEDEIQCIFWSVQG---EENATTDRPRAGILCLSED 857
Query: 296 SELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNE 355
+ + K ++M E+EL
Sbjct: 858 NGIVNRIAKQVRMEVEYEEEELELV----------------------------------- 882
Query: 356 KELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSS 414
+ ++ VRQ+DPDIL GYE+ SWGYL+ER + +L E+SR+
Sbjct: 883 ----NRIVDIVRQFDPDILTGYEVHNGSWGYLIERARMKYEYDLCDEISRMKSQSHGRFG 938
Query: 415 RDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
++ + +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + LT
Sbjct: 939 KEADRWGFTHTSTIRVTGRHMINIWRAMRGELNLLQYTMENVVFHLLHKRIPHYQHSELT 998
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W+ ++H++ RV + ++E + + RTSE ARL G+ F+ V+SRGSQ++
Sbjct: 999 AWYRSDRPRDLAKVLDHFISRVQLNLDILEANEIVPRTSEQARLLGVDFFSVISRGSQYK 1058
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
VES M R+++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSLYPSV
Sbjct: 1059 VESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSAFYTSPLLVLDFQSLYPSV 1118
Query: 590 IIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIR 649
+IAYN+C+STCLGR+ + G +D + L+ +Q ++ I+P+G+ +V +R
Sbjct: 1119 MIAYNFCYSTCLGRITSWRGRNK--MGFMDFKREPQLLELVQDHINIAPNGMMYVKPEMR 1176
Query: 650 CGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+L KML E+L+TR+MVK MK+ K ++L+ L
Sbjct: 1177 KSLLAKMLGELLETRVMVKSGMKQDKDDKALQQL 1210
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES++ R KP++ SP+RK +++ + M P S+ YT P++VLDFQSLY
Sbjct: 1060 ESTMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQSA----FYTSPLLVLDFQSLY 1115
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYN+C+STCLGR+
Sbjct: 1116 PSVMIAYNFCYSTCLGRI 1133
>gi|402084632|gb|EJT79650.1| hypothetical protein GGTG_04734 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1144
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 261/476 (54%), Gaps = 49/476 (10%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
I+ TP ++ + H E Y++ +++E+H +R L PDP DEVK IF+
Sbjct: 186 IEGPTPRDGHGFKYSQRKKSASVQH-EVQYMSTMSMELHVNTRERLVPDPEEDEVKLIFW 244
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
L + + G+I++ ++ L
Sbjct: 245 CLKSDGASGGVQSGVIVLSEDGRL------------------------------------ 268
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV- 393
G + G L+E ++E EL +E VR DPDIL GYE+ SWGYL+ER +
Sbjct: 269 GRRMRHQVSGQLVEE---ASELELMLRMVELVRTHDPDILTGYEVHGGSWGYLVERARLK 325
Query: 394 LGLNLNQELSRITEVE-----KRNSSRDEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYT 447
+L E SR+ + + R + T L++ GR +IN+WR +R E++LQ Y+
Sbjct: 326 YDYDLCDEFSRMKSQSSHGRYAKGADRWGFRTTSALRVTGRHMINIWRAMRGELSLQQYS 385
Query: 448 FENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRT 507
EN+++H+LH RIP ++++ LT W+ + H V ++ RV + ++++ + + RT
Sbjct: 386 MENVVWHLLHRRIPHYAYETLTDWYRNGWHRDLDKLVRYWQTRVRLDLEILDENELVSRT 445
Query: 508 SEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILE 567
SE ARL G+ F+ V SRGSQF+VESIM R+++ +F+ SPS +Q A E LPL++E
Sbjct: 446 SEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPESFLLPSPSRQQVGAQNALECLPLVME 505
Query: 568 PESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSL 627
P+S YT P++VLDFQSLYPSV+IAYNYC+ST LGR+ ++ F + R L
Sbjct: 506 PQSAFYTSPVVVLDFQSLYPSVMIAYNYCYSTFLGRIVDWRGANKMGFA--NYRRRRRLL 563
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ LQ ++ I+P+GV + +IR +L KML EIL+TR+MVK M++ K +L+ L
Sbjct: 564 ELLQDHINIAPNGVMYTKATIRKSLLAKMLTEILETRVMVKSGMRQDKEDRALQRL 619
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP+ PSP+R+ +++ + M P S+ YT P++VLDFQSLY
Sbjct: 469 ESIMFRIAKPESFLLPSPSRQQVGAQNALECLPLVMEPQSA----FYTSPVVVLDFQSLY 524
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 525 PSVMIAYNYCYSTFLGRI 542
>gi|78523223|gb|ABB46349.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 247/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F YL + +D GII+ ++S
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFLYLRSEVNALRGTQTPDDTARGIIVFSEDS 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMV---------------------- 1012
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1013 ----RMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SW L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWMTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V+SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVVSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ F+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPEKFLLASPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGKNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K ++++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDKAIQQL 1339
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y+ P++VLDFQSLYPSV+IAYNYC+ST LG
Sbjct: 1205 SPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLYPSVMIAYNYCYSTFLG 1260
Query: 141 RV 142
R+
Sbjct: 1261 RI 1262
>gi|212544614|ref|XP_002152461.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210065430|gb|EEA19524.1| DNA polymerase zeta catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 1655
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 245/445 (55%), Gaps = 61/445 (13%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
Y++V+++E+H +R L P+P DE+ +GI+ + +P +
Sbjct: 828 YMSVMSLEVHVNTREGLAPNPEEDEISV--------------HLGILAQPADVLVPVAAS 873
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+++ ++E +L ++ ++ VR DPDI+ GYE+ SWGYL+ER V E +L +
Sbjct: 874 LSVEIQTEASELDLITSLVDIVRNHDPDIITGYEVHNGSWGYLIERARVKYEYDLCN--- 930
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE----KRNSSRDEVK 419
ELSR+ ++S R
Sbjct: 931 -------------------------------------ELSRVKASAHGRFGKDSDRWGFN 953
Query: 420 NT-QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
NT + + GR +IN+WR +R E+NL YT EN+++H+LH RIP + +K LT W+
Sbjct: 954 NTSSISVTGRHMINIWRAMRSELNLLGYTMENVVFHLLHRRIPHYPFKDLTRWFTGSKPR 1013
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
VE+YL RV + +++ + I RTSE ARL G+ F+ V SRGSQF+VES+M R++
Sbjct: 1014 NIMKVVEYYLSRVQLDLEILDTNELIPRTSEQARLLGVDFFSVFSRGSQFKVESLMFRIA 1073
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ NF+ +SPS KQ A E LPL++EP+S YT P++VLDFQSLYPS+IIAYNYC+S
Sbjct: 1074 KPENFILISPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIIIAYNYCYS 1133
Query: 599 TCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
T LGR+++ G + R L+ L+ ++ I+P+G+ + IR +L +ML
Sbjct: 1134 TFLGRLDNW--RGRGKMGFTEYKRQERILELLKDHVNIAPNGMIYAKPEIRKSLLARMLS 1191
Query: 659 EILDTRLMVKQSMKEYKFSESLRNL 683
EIL+TR+MVK MK K ++L+ L
Sbjct: 1192 EILETRVMVKSGMKADKDDKTLQQL 1216
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 9/80 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1066 ESLMFRIAKPENFILISPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1121
Query: 125 PSVIIAYNYCFSTCLGRVEH 144
PS+IIAYNYC+ST LGR+++
Sbjct: 1122 PSIIIAYNYCYSTFLGRLDN 1141
>gi|78523225|gb|ABB46350.1| UPR1 [Neurospora tetrasperma]
Length = 1926
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 246/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GI++ ++
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIVVFSEDG 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMV---------------------- 1012
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1013 ----RMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYDLDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DVDRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE RL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQVRLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLASPSRKQVGAQNALECLPLVMEPQSAFYSCPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGKNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDRAIQQL 1339
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLASPSRKQVGAQNALECLPLVMEPQSA----FYSCPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|350297217|gb|EGZ78194.1| hypothetical protein NEUTE2DRAFT_101866 [Neurospora tetrasperma FGSC
2509]
Length = 1925
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 261/495 (52%), Gaps = 59/495 (11%)
Query: 204 TPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPD 263
TP R + +TP ++ +E ++ + Y++ +++E+H +R L PD
Sbjct: 889 TPLRIKTYRSQVAGVTPKNKHGFEHPEKTKSE-SAQDQAQYMSAMSLEVHVNTRGKLVPD 947
Query: 264 PAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKE 316
P DEV+ +F+YL + +D GI++ ++ L + K + V E
Sbjct: 948 PEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIVVFSEDGLLADRIRKHTSVPVVQETTE 1007
Query: 317 LFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIG 376
L D+++ +E VR DPDI G
Sbjct: 1008 L-------------DMMV--------------------------RMVEIVRSHDPDIFTG 1028
Query: 377 YEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIV 430
YE+ SWGYL+ER + L+L E SR+ +D + + +++ GR +
Sbjct: 1029 YEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGKDADRWGFNTTSSIRITGRHM 1088
Query: 431 INLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW--EHRTHLYKWMTVEHYL 488
IN+WR +R ++NL YT EN+++H+LH RIP +SWK L+ W+ + L K + +YL
Sbjct: 1089 INIWRAMRGKLNLLQYTMENVVWHLLHRRIPHYSWKTLSDWYLSDRPKDLDK--VLRYYL 1146
Query: 489 IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
R I ++E+ + I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ SP
Sbjct: 1147 TRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLASP 1206
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 608
S KQ A E LPL++EP+S Y+ P++VLDFQSLYPSV+IAYNYC+ST LGR+ +
Sbjct: 1207 SRKQVGAQNALECLPLVMEPQSAFYSCPLLVLDFQSLYPSVMIAYNYCYSTFLGRI--VS 1264
Query: 609 VSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVK 668
G +D L L+ + I+P+G+ + IR +L KML EIL+TR+MVK
Sbjct: 1265 WRGKNKMGFMDYKRQEGLLSLLKNYINIAPNGMMYTKPHIRKSLLAKMLTEILETRIMVK 1324
Query: 669 QSMKEYKFSESLRNL 683
MK+ K + ++ L
Sbjct: 1325 SGMKQDKDDKVIQQL 1339
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLASPSRKQVGAQNALECLPLVMEPQSA----FYSCPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|255944163|ref|XP_002562849.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587584|emb|CAP85625.1| Pc20g02960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1697
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 251/458 (54%), Gaps = 42/458 (9%)
Query: 234 NEVTSHVENY--YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIIL 291
N V++ VE+ +++ +++E+H +R L P+P DE+ ++F+ C ED + +
Sbjct: 839 NGVSTSVEHQAQHMSTMSLEVHVNTRGTLMPNPEEDEITSLFW----CIQSEDEDIEV-- 892
Query: 292 IGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
S LP V + E E I + I E E
Sbjct: 893 ---NSHLPGVHVGMV----YHGEGERPEAKISKA------LTIDVEHEP----------- 928
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEK 410
E +L + I+ VR +DPDI+ GYE+ SWGY++ER ++ +ELSR
Sbjct: 929 --TELDLINRLIDIVRYYDPDIITGYEVHNASWGYVIERARKKYDFDICEELSRTKSQSN 986
Query: 411 RNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ + ++ +++ GR + N+WR ++ E+NL YT EN+++HVLH RIP +S
Sbjct: 987 GRFGKEADQWGFNHSSSIRITGRHMFNIWRAMKSELNLLQYTMENVVFHVLHRRIPHYSP 1046
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
K LT W + V+++ RV + ++E + RTSE ARL GI F V++RG
Sbjct: 1047 KHLTQWHQSGRPRNILKVVQYFTSRVQMNLEILEANELTPRTSEQARLLGIDFASVITRG 1106
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VES+M R+++ NF+ VSPS KQ A E LPL++EP+S YT P++VLDFQSL
Sbjct: 1107 SQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSL 1166
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YPSV+IAYNYC+ST LGR H D G ID R L+ L+ + I+P+G+ +
Sbjct: 1167 YPSVMIAYNYCYSTFLGRAMHWRGRDK--MGFIDYKRQPRILELLKDKINIAPNGMMYAK 1224
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ R +L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1225 QEARQSLLAKMLSEILETRVMVKNGMKADKDDKVLQRL 1262
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1112 ESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1167
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
PSV+IAYNYC+ST LGR H D F
Sbjct: 1168 PSVMIAYNYCYSTFLGRAMHWRGRDKMGF 1196
>gi|88604880|gb|ABD46760.1| REV3 [Neurospora crassa]
Length = 1926
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 246/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+YL + +D GII+ ++S
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYLRSEVNALRGTQTPDDTARGIIVFSEDS 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMVR--------------------- 1013
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1014 -----MVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++E+ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILEKNELIPRTSEQARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS K A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKHVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KM EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMSTEILETRIMVKSGMKQDKDDRAIQQL 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK+ +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKHVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|326529379|dbj|BAK01083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1715
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 253/467 (54%), Gaps = 76/467 (16%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR----KVGIILIGQESELPE 300
LT+L++E+ A SRA L+PDP +D + + + E+D +V +++ G +L
Sbjct: 842 LTILSIEVFAESRADLRPDPRFDAINVVSLAV-----EDDGDNTVEVRVLIRGNNDKLHG 896
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
R + D +IG ++ F EK+L +
Sbjct: 897 RR--------------------------NLDGVIGCSVDVFP-----------EEKDLLN 919
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN-------- 412
I + DPDIL+G+EI+ S G+L ER LG+ L + +SR E ++
Sbjct: 920 HLIGALCSIDPDILVGWEIQLGSLGFLAERAAYLGIGLLKRISRTLPHESKHPPKNLAHE 979
Query: 413 -------SSRDEVK------------NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMY 453
S D+V + + + GRIV+NLWRL+R EV L +Y+ E +
Sbjct: 980 SSQAPEASPADDVTVDVSETDWSHTHASGVHVGGRIVLNLWRLMRGEVKLNNYSLEAVAD 1039
Query: 454 HVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
VL ++PL K L W+ + +E+ R + +I QLD + RTSE+AR+
Sbjct: 1040 EVLRRKVPLVPTKTLNRWFATGPGRGRHRCIEYVSSRAMLNLEIINQLDLVNRTSELARV 1099
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLY 573
FGI F+ VLSRGSQFRVES++LRL+ N++A+SP +Q A A E +PL++EPES Y
Sbjct: 1100 FGIDFFSVLSRGSQFRVESMLLRLAHTQNYLAISPGNQQVASQPAMECMPLVMEPESAFY 1159
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
+DP++VLDFQSLYPS+IIAYN C+STCLG+V S S G + ++ L+
Sbjct: 1160 SDPVLVLDFQSLYPSMIIAYNLCYSTCLGKV---FPSKSSVLGVSSYSADPHTIADLKNQ 1216
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
L ++P+GV +V +R G++P++L+EIL TR+MVKQ+MK+ S+ +
Sbjct: 1217 LLLTPNGVLYVQPEVRKGVVPRLLEEILSTRIMVKQAMKKLAPSQKV 1263
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y+DP++VLDFQSLYPS+IIAYN C+STCLG+V
Sbjct: 1158 FYSDPVLVLDFQSLYPSMIIAYNLCYSTCLGKV 1190
>gi|238505487|ref|XP_002383968.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus flavus
NRRL3357]
gi|220690082|gb|EED46432.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus flavus
NRRL3357]
Length = 1430
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 252/450 (56%), Gaps = 42/450 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ Y++++++E+H +R +L P+P DE+ I + C +D + + S L
Sbjct: 583 QTQYMSIMSLEVHVNTRGVLAPNPEEDEISCISW----CIQSDDEDLDV-----NSHLSG 633
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWD-PDILIGYEIETFSWGYLLERHFVSNEKELF 359
VR + M F ++D P+ ET S ++ E +L
Sbjct: 634 VR---VGMVFQG--------------EYDKPE-------ETLSKALRIDLEHEPTELDLI 669
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDEV 418
+ ++ VR +DPDI+ GYE+ SWGY++ER ++ ELSR+ +D
Sbjct: 670 NRLVDLVRLYDPDIITGYEVHNGSWGYVIERARKKYDFDICDELSRVKSQAHGRFGKDAD 729
Query: 419 K-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+ + +++ GR +IN+WR +R E+NL Y+ EN+++H+LH RIP +S++ LT W++
Sbjct: 730 RWGFNHTSSIRVSGRHMINIWRAMRSELNLLQYSMENVVFHLLHRRIPHYSFRDLTEWYQ 789
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
V++++ RV + ++E + + R SE ARL GI FY V SRGSQF+VES+
Sbjct: 790 SGKPRDLMKVVDYFVSRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVESL 849
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
M R+++ NF+ VSPS KQ A E LPL++EP+S YT P+IVLDFQSLYPS++IAY
Sbjct: 850 MFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAY 909
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYC+ST LGRV D G + R L+ + + I+P+G+ + +R +L
Sbjct: 910 NYCYSTFLGRVHQWRGRDK--MGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLL 967
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML EIL+TR+MVK MK K ++L+ L
Sbjct: 968 ARMLAEILETRVMVKTGMKMDKDDKALQRL 997
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
YT P+IVLDFQSLYPS++IAYNYC+ST LGRV D F
Sbjct: 888 FYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVHQWRGRDKMGF 931
>gi|317151429|ref|XP_001824655.2| DNA polymerase zeta catalytic subunit [Aspergillus oryzae RIB40]
Length = 1670
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 252/450 (56%), Gaps = 42/450 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ Y++++++E+H +R +L P+P DE+ I + C +D + + S L
Sbjct: 823 QTQYMSIMSLEVHVNTRGVLAPNPEEDEISCISW----CIQSDDEDLDV-----NSHLSG 873
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWD-PDILIGYEIETFSWGYLLERHFVSNEKELF 359
VR + M F ++D P+ ET S ++ E +L
Sbjct: 874 VR---VGMVFQG--------------EYDKPE-------ETLSKALRIDLEHEPTELDLI 909
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDEV 418
+ ++ VR +DPDI+ GYE+ SWGY++ER ++ ELSR+ +D
Sbjct: 910 NRLVDLVRLYDPDIITGYEVHNGSWGYVIERARKKYDFDICDELSRVKSQAHGRFGKDAD 969
Query: 419 K-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+ + +++ GR +IN+WR +R E+NL Y+ EN+++H+LH RIP +S++ LT W++
Sbjct: 970 RWGFNHTSSIRVSGRHMINIWRAMRSELNLLQYSMENVVFHLLHRRIPHYSFRDLTEWYQ 1029
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
V++++ RV + ++E + + R SE ARL GI FY V SRGSQF+VES+
Sbjct: 1030 SGKPRDLMKVVDYFVSRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVESL 1089
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
M R+++ NF+ VSPS KQ A E LPL++EP+S YT P+IVLDFQSLYPS++IAY
Sbjct: 1090 MFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAY 1149
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYC+ST LGRV D G + R L+ + + I+P+G+ + +R +L
Sbjct: 1150 NYCYSTFLGRVHQWRGRDK--MGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLL 1207
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1208 ARMLAEILETRVMVKTGMKMDKDDKALQRL 1237
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
YT P+IVLDFQSLYPS++IAYNYC+ST LGRV D F
Sbjct: 1128 FYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVHQWRGRDKMGF 1171
>gi|88604876|gb|ABD46758.1| REV3 [Neurospora crassa]
Length = 1926
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 247/455 (54%), Gaps = 58/455 (12%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-------CPPEEDRKVGIILIGQES 296
Y++ +++E+H +R L PDP DEV+ +F+Y+ + +D GI++ ++
Sbjct: 928 YMSAMSLEVHVNTRGKLVPDPEEDEVQCVFWYMRSEVNALRGTQAPDDTVRGIVVFSEDG 987
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
L + K + V EL D+++
Sbjct: 988 LLADRIRKHTSVPVVQETTEL-------------DMMV---------------------- 1012
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSR 415
+E VR DPDI GYE+ SWGYL+ER + L+L E SR+ +
Sbjct: 1013 ----RMVEIVRNHDPDIFTGYEVHGSSWGYLIERARIKYELDLCDEFSRMKSQSNGRIGK 1068
Query: 416 DEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
D + + +++ GR +IN+WR +R E+NL YT EN+++H+LH RIP +SWK L+
Sbjct: 1069 DADRWGFNTTSSIRITGRHMINIWRAMRGELNLLQYTMENVVWHLLHRRIPHYSWKTLSD 1128
Query: 471 WW--EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
W+ + L K + +YL R I ++++ + I RTSE ARL G+ F+ V SRGSQF
Sbjct: 1129 WYLSDRPKDLDK--VLRYYLTRTRLDIEILDKNELIPRTSEHARLLGVDFFSVFSRGSQF 1186
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VESIM R+++ NF+ SPS KQ A E LPL++EP+S Y+ P++VLDFQSLYPS
Sbjct: 1187 KVESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSAFYSSPLLVLDFQSLYPS 1246
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
V+IAYNYC+ST LGR+ + G +D L L+ + I+P+G+ + I
Sbjct: 1247 VMIAYNYCYSTFLGRI--VSWRGRNKMGFMDYKRQEGLLSLLKDYINIAPNGMMYTKPHI 1304
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML EIL+TR+MVK MK+ K +++ L
Sbjct: 1305 RKSLLAKMLTEILETRIMVKSGMKQDKDDRAIQPL 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ PSP+RK +++ + M P S+ Y+ P++VLDFQSLY
Sbjct: 1189 ESIMFRIAKPENFLLPSPSRKQVGAQNALECLPLVMEPQSA----FYSSPLLVLDFQSLY 1244
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1245 PSVMIAYNYCYSTFLGRI 1262
>gi|83773395|dbj|BAE63522.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863054|gb|EIT72368.1| DNA polymerase zeta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1566
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 252/450 (56%), Gaps = 42/450 (9%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+ Y++++++E+H +R +L P+P DE+ I + C +D + + S L
Sbjct: 719 QTQYMSIMSLEVHVNTRGVLAPNPEEDEISCISW----CIQSDDEDLDV-----NSHLSG 769
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWD-PDILIGYEIETFSWGYLLERHFVSNEKELF 359
VR + M F ++D P+ ET S ++ E +L
Sbjct: 770 VR---VGMVFQG--------------EYDKPE-------ETLSKALRIDLEHEPTELDLI 805
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDEV 418
+ ++ VR +DPDI+ GYE+ SWGY++ER ++ ELSR+ +D
Sbjct: 806 NRLVDLVRLYDPDIITGYEVHNGSWGYVIERARKKYDFDICDELSRVKSQAHGRFGKDAD 865
Query: 419 K-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+ + +++ GR +IN+WR +R E+NL Y+ EN+++H+LH RIP +S++ LT W++
Sbjct: 866 RWGFNHTSSIRVSGRHMINIWRAMRSELNLLQYSMENVVFHLLHRRIPHYSFRDLTEWYQ 925
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
V++++ RV + ++E + + R SE ARL GI FY V SRGSQF+VES+
Sbjct: 926 SGKPRDLMKVVDYFVSRVQMNLEILESNELVPRISEQARLLGIDFYSVFSRGSQFKVESL 985
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
M R+++ NF+ VSPS KQ A E LPL++EP+S YT P+IVLDFQSLYPS++IAY
Sbjct: 986 MFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSDFYTSPLIVLDFQSLYPSIMIAY 1045
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYC+ST LGRV D G + R L+ + + I+P+G+ + +R +L
Sbjct: 1046 NYCYSTFLGRVHQWRGRDK--MGFTEYQRQPRLLELFKDKINIAPNGMMYAKPEVRRSLL 1103
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ML EIL+TR+MVK MK K ++L+ L
Sbjct: 1104 ARMLAEILETRVMVKTGMKMDKDDKALQRL 1133
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP++K +++ + M P S YT P+IVLDFQSLY
Sbjct: 983 ESLMFRIAKPENFLLVSPSKKQVGQQNALECLPLVMEPQSD----FYTSPLIVLDFQSLY 1038
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
PS++IAYNYC+ST LGRV D F
Sbjct: 1039 PSIMIAYNYCYSTFLGRVHQWRGRDKMGF 1067
>gi|115402505|ref|XP_001217329.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
gi|114189175|gb|EAU30875.1| hypothetical protein ATEG_08743 [Aspergillus terreus NIH2624]
Length = 1696
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 256/472 (54%), Gaps = 43/472 (9%)
Query: 220 PDTTGDYQMGLDNLNEVTSHVENY--YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY 277
P +Y ++ TS VE++ Y++ +++E+H +R +L P+P DE+ +F+
Sbjct: 800 PTQKNEYGFKYSQKSKSTS-VEHHTQYMSSMSLEVHVNTRGVLSPNPDEDEITCLFW--- 855
Query: 278 TCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYE 337
C ED V + S LP I + +E S ++ I E
Sbjct: 856 -CIQSEDDSVDV-----NSYLPGTHVGLIFQGDGNRPEEKLSKALK----------ISME 899
Query: 338 IETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGL 396
E S E EL + I+ VR DPDI+ GYE+ SWGY++ER
Sbjct: 900 HE-------------STELELINRLIDIVRYHDPDIITGYEVHNGSWGYVIERARKKYDF 946
Query: 397 NLNQELSRITEVEKRNSSRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENI 451
+L +EL+R+ +D + +++ GR +IN+WR +++E+NL YT EN+
Sbjct: 947 DLCEELARVKSQSHGRFGKDADRWGFTHTSSIRVTGRHMINIWRAMQNELNLLQYTMENV 1006
Query: 452 MYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
++H+LH RIP +S++ LT W++ +++++ RV + +I+ + I RTSE A
Sbjct: 1007 VFHLLHRRIPHYSFRDLTEWYQSGKPRNLLKVIDYFVSRVQMDLEIIDANELIPRTSEQA 1066
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESR 571
RL G+ FY V +RGSQF+VES+M R+++ NF+ VSPS KQ A E LPL++EP+S
Sbjct: 1067 RLLGVDFYSVFARGSQFKVESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQSD 1126
Query: 572 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
YT P++VLDFQSLYPS++IAYNYC+ST LGR D G D L +
Sbjct: 1127 FYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRARQWRGRDK--MGFTDYARQPGLLDLFK 1184
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ ++P+G+ + +R +L KML EIL+TR+MVK MK K + L+ L
Sbjct: 1185 DKINVAPNGMIYAKPEVRKSLLAKMLSEILETRVMVKTGMKMDKDDKMLQRL 1236
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP+RK +++ + M P S YT P++VLDFQSLY
Sbjct: 1086 ESLMFRIAKPENFLLVSPSRKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 1141
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
PS++IAYNYC+ST LGR D F
Sbjct: 1142 PSIMIAYNYCYSTFLGRARQWRGRDKMGF 1170
>gi|346320496|gb|EGX90096.1| DNA polymerase zeta catalytic subunit, putative [Cordyceps militaris
CM01]
Length = 1666
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 253/482 (52%), Gaps = 55/482 (11%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID TP ++ + H E Y++ + +E+H +RA L P+P DEV+ IF+
Sbjct: 787 IDGPTPKNKHGFKYTQQRKSTNVQH-EVQYMSTMCLEVHVNTRAKLVPNPEEDEVQCIFW 845
Query: 275 ------YLYTCPPEEDRKV-GIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQ 327
Y + D + G+I++G ++ K + + + EL
Sbjct: 846 CCKGDEVTYASQNDGDGTISGLIVLGSGGDVARRLRKTCKAEVIEEDSEL---------- 895
Query: 328 WDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYL 387
L + V++ DPDIL GYE+ SWG+L
Sbjct: 896 -----------------------------NLLVRLGDVVKELDPDILTGYEVHGGSWGFL 926
Query: 388 LERGYV-LGLNLNQELSRITEVE----KRNSSRDEVKNTQ-LQMPGRIVINLWRLLRHEV 441
+ER + +L ELSR+ + S R T +++ GR +IN+WR +R E+
Sbjct: 927 MERARLKYDYDLCNELSRVNAQSHGRFGKQSDRWGFNTTSTIRVTGRHMINIWRAMRGEL 986
Query: 442 NLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQL 501
NL YT EN+ +H+LH R+P +S+K LT W++ + ++ R ++++E
Sbjct: 987 NLLQYTLENVAWHLLHRRVPHYSYKTLTAWYKSGKPSDLSKLLRYFQSRTKIDLQILEAN 1046
Query: 502 DFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPES 561
+ I RTSE ARL G+ F+ V SRGSQF+VESIM R+++ NF+ +SPS KQ A E
Sbjct: 1047 ELIPRTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLISPSKKQVGGQNALEC 1106
Query: 562 LPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLN 621
LPL++EP+S LY+ P++VLDFQSLYPSV+IAYNYC+ST LGR+ + + F
Sbjct: 1107 LPLVMEPQSALYSSPVLVLDFQSLYPSVMIAYNYCYSTFLGRIVNWCGTSKMGFTEYKRQ 1166
Query: 622 VSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLR 681
+ +L L+ + I+P+G+ FV IR +L KML EIL+ R+MVK MKE K + L+
Sbjct: 1167 AGLMAL--LKDYINIAPNGMMFVKAEIRKSLLAKMLTEILEARVMVKSGMKEDKDDKMLQ 1224
Query: 682 NL 683
L
Sbjct: 1225 QL 1226
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP++K +++ + M P S+ LY+ P++VLDFQSLY
Sbjct: 1076 ESIMFRIAKPENFLLISPSKKQVGGQNALECLPLVMEPQSA----LYSSPVLVLDFQSLY 1131
Query: 125 PSVIIAYNYCFSTCLGRV 142
PSV+IAYNYC+ST LGR+
Sbjct: 1132 PSVMIAYNYCYSTFLGRI 1149
>gi|218200227|gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indica Group]
gi|222637649|gb|EEE67781.1| hypothetical protein OsJ_25510 [Oryza sativa Japonica Group]
Length = 1797
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 285/548 (52%), Gaps = 81/548 (14%)
Query: 162 NQSPPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPK-RRICDSYAIDAMTP 220
+ SP +K ++ + T PD + PDL I+ + +I D +TP
Sbjct: 854 DDSPASKMALEHSITTFPD----DTVMIEPDLSNQEIKNLADWHDFSQISGGDEKDKLTP 909
Query: 221 DTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCP 280
+ Q+G + + + LT++++E+ SR L+PDP +D + A+ +
Sbjct: 910 LS----QIGFCDPASIGGGQQ---LTIISIEVITESRGELRPDPRFDAINAVSLAVED-- 960
Query: 281 PEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIET 340
+ D + + ++ I+ N S+ R+ + D + G ++
Sbjct: 961 -DADNTIEVHVL-------------IRGNNDSSH-----------RRRNLDGVSGCDVNV 995
Query: 341 FSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQ 400
F E+EL + I + DPDI++G+EI+ S G+L ER LG+ L +
Sbjct: 996 FP-----------GERELLNHLINAICSIDPDIIVGWEIQLGSLGFLAERAAHLGIGLLK 1044
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPG----------------------------RIVIN 432
+SR + ++ + V + ++PG RI++N
Sbjct: 1045 RISRTPPHQMKHPPMNPVDESSQELPGASSADDVIDDASENNWSHAHASGIHVDGRIILN 1104
Query: 433 LWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVT 492
LWRL+R EV L +Y+ E + VL ++PL K+L W+ + ++ +E+ R +
Sbjct: 1105 LWRLMRAEVKLNNYSLEAVANEVLRRKVPLVPTKILNRWFATGSGRGRYRCIEYVNKRSS 1164
Query: 493 GIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ 552
+ ++ QLD + RTSE+AR+FGI F+ VLSRGSQFRVES++LRL N++A+SP +Q
Sbjct: 1165 LNLEILNQLDLVNRTSELARVFGIDFFSVLSRGSQFRVESMLLRLVHTQNYLAISPGNQQ 1224
Query: 553 RAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 612
A A E LPL++EPES Y+DP++VLDFQSLYPS+IIAYN C+STCLG+V S S
Sbjct: 1225 VASQPAMECLPLVMEPESAFYSDPVVVLDFQSLYPSMIIAYNLCYSTCLGKVF---PSKS 1281
Query: 613 FPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G + + + L+ L ++P+GV +V +R G+LP++L+EIL TR+MVK++MK
Sbjct: 1282 SVLGVSSYSADPQKIADLKNQLLLTPNGVLYVQPEVRKGVLPRLLEEILSTRIMVKKAMK 1341
Query: 673 EYKFSESL 680
+ S+ +
Sbjct: 1342 KLSASQKV 1349
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y+DP++VLDFQSLYPS+IIAYN C+STCLG+V
Sbjct: 1244 FYSDPVVVLDFQSLYPSMIIAYNLCYSTCLGKV 1276
>gi|357121575|ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Brachypodium
distachyon]
Length = 1720
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 266/532 (50%), Gaps = 92/532 (17%)
Query: 179 PDCS--KSSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEV 236
PD S +S Q+D + F + E K ++ I P +TG Q
Sbjct: 797 PDLSSKESKQVD----EWHDFSQISAEAEKDKLTPLSQIGFRDPASTGGGQQ-------- 844
Query: 237 TSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQES 296
LT+L++E+ SR L+PDP D + + + E+D +
Sbjct: 845 --------LTILSIEVFTESRGELRPDPRLDAINVVSLAV-----EDDADSTV------- 884
Query: 297 ELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
EVR L EN + + D + G ++ F EK
Sbjct: 885 ---EVRV-------------LIRGNNENTHRRNLDGIAGCTVDVFP-----------EEK 917
Query: 357 ELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRD 416
L I+ + DPDIL+G+EI+ S G+L ER LG+ L + +SR E ++ RD
Sbjct: 918 GLLKHLIDVICSIDPDILVGWEIQLESLGFLAERAAHLGVGLLRRISRTLPHESKHPPRD 977
Query: 417 EVKNTQLQMP----------------------------GRIVINLWRLLRHEVNLQSYTF 448
+ +P GRIV+NLWRL+R EV L Y+
Sbjct: 978 LAHESSQGLPEASSADDVIADVNENAWSHTHVSGVHVGGRIVLNLWRLMRAEVKLNIYSL 1037
Query: 449 ENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
E + VL ++PL K+L W+ + +++ R + +I +LD I RTS
Sbjct: 1038 EAVADEVLRRKVPLVPTKILKRWFATGPGRGRHRCIQYASSRAMLNLEIINKLDLINRTS 1097
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
E+AR+FGI F+ VLSRGSQFRVES++LRL+ N++A+SP +Q A A E LPL++EP
Sbjct: 1098 ELARVFGIDFFSVLSRGSQFRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEP 1157
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
ES Y+DP++VLDFQSLYPS+IIAYN C+STCLG+V S S G + ++
Sbjct: 1158 ESAFYSDPVLVLDFQSLYPSMIIAYNLCYSTCLGKV---FPSKSNVLGVSTYSADPHTIV 1214
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
L+ L ++P+GV +V IR G++P++L+EIL TR+MVKQ+MK+ S+ +
Sbjct: 1215 DLKNQLLLTPNGVLYVQPEIRKGVVPRLLEEILSTRIMVKQAMKKLSPSQKV 1266
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y+DP++VLDFQSLYPS+IIAYN C+STCLG+V
Sbjct: 1161 FYSDPVLVLDFQSLYPSMIIAYNLCYSTCLGKV 1193
>gi|119192044|ref|XP_001246628.1| hypothetical protein CIMG_00399 [Coccidioides immitis RS]
Length = 1525
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 256/449 (57%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E +Y++V+++E+H +R L P+P DE+ IF+ C +R +G+ + S+ E
Sbjct: 679 EAHYMSVMSLEVHVNTRCTLAPNPEEDEISCIFW----CIQSGNRSLGV---NEPSD--E 729
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
V+T + + E E + I ++D + I E S+E ++ +
Sbjct: 730 VQTGVLAVA----ETESIAGKI----RYDTNAEIEEE---------------SSELDVLT 766
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI-TEVEKR---NSSR 415
++ VR +DPDIL GYE+ SWGYL+ER V +L ELSR+ T+ R S R
Sbjct: 767 KLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYDYDLCDELSRVKTDSHGRFGKESDR 826
Query: 416 DEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+T +++ GR +IN+WR +R E++L YT EN+ +H+LH+RIP + + LT W++
Sbjct: 827 WGFNHTSTIRVTGRHMINIWRAMRSELSLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKS 886
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
V +++ R + +++ + I RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 887 TKPRNLVKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLM 946
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SPS Q A E LPL++EP+S Y P++VLDFQSLYPSV+IAYN
Sbjct: 947 FRIAKPENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYN 1006
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+ST LGR+ + G ID L L+ + I+P+G+ + +R +L
Sbjct: 1007 YCYSTFLGRI--VDWRGRNKMGFIDYQRQQGLLGLLESQINIAPNGIMYTRPEVRKSLLA 1064
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K +L+ L
Sbjct: 1065 KMLSEILETRVMVKGGMKANKEDRALQRL 1093
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P++VLDFQSLYPSV+IAYNYC+ST LGR+
Sbjct: 984 FYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI 1016
>gi|392864138|gb|EAS35055.2| polymerase zeta subunit [Coccidioides immitis RS]
Length = 1679
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 256/449 (57%), Gaps = 40/449 (8%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
E +Y++V+++E+H +R L P+P DE+ IF+ C +R +G+ + S+ E
Sbjct: 833 EAHYMSVMSLEVHVNTRCTLAPNPEEDEISCIFW----CIQSGNRSLGV---NEPSD--E 883
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
V+T + + E E + I ++D + I E S+E ++ +
Sbjct: 884 VQTGVLAVA----ETESIAGKI----RYDTNAEIEEE---------------SSELDVLT 920
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRI-TEVEKR---NSSR 415
++ VR +DPDIL GYE+ SWGYL+ER V +L ELSR+ T+ R S R
Sbjct: 921 KLVDIVRYYDPDILTGYEVHNGSWGYLIERARVKYDYDLCDELSRVKTDSHGRFGKESDR 980
Query: 416 DEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+T +++ GR +IN+WR +R E++L YT EN+ +H+LH+RIP + + LT W++
Sbjct: 981 WGFNHTSTIRVTGRHMINIWRAMRSELSLIQYTLENVAFHLLHKRIPHYPFHDLTKWFKS 1040
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
V +++ R + +++ + I RTSE AR+ GI F+ V SRGSQF+VES+M
Sbjct: 1041 TKPRNLVKVVNYFITRTRLNLDILDANELISRTSEQARILGIDFFSVFSRGSQFKVESLM 1100
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R+++ NF+ +SPS Q A E LPL++EP+S Y P++VLDFQSLYPSV+IAYN
Sbjct: 1101 FRIAKPENFILISPSKAQVGQQNALECLPLVMEPQSDFYNSPLLVLDFQSLYPSVMIAYN 1160
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
YC+ST LGR+ + G ID L L+ + I+P+G+ + +R +L
Sbjct: 1161 YCYSTFLGRI--VDWRGRNKMGFIDYQRQQGLLGLLESQINIAPNGIMYTRPEVRKSLLA 1218
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNL 683
KML EIL+TR+MVK MK K +L+ L
Sbjct: 1219 KMLSEILETRVMVKGGMKANKEDRALQRL 1247
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P++VLDFQSLYPSV+IAYNYC+ST LGR+
Sbjct: 1138 FYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRI 1170
>gi|50305361|ref|XP_452640.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641773|emb|CAH01491.1| KLLA0C09911p [Kluyveromyces lactis]
Length = 1451
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 258/474 (54%), Gaps = 45/474 (9%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
++ TP+ Y+ + + E ++ N +T +EIH +R PDP YD V+ IF+
Sbjct: 587 VEGKTPELPFGYKFKSNKI-EKNNNASNR-MTHFTMEIHVNTREDKFPDPKYDAVRMIFW 644
Query: 275 YLY--TCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDI 332
+ T P + D I QE L I ++ VS E + DP +
Sbjct: 645 KVQDGTFPFDLD-------ITQEGVL-------IFLDDVSTENSW--------KTADPSV 682
Query: 333 LIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGY 392
I + Y LE + VR +DPDIL GYEI + SWGYL++R +
Sbjct: 683 HITAYYDELEMIYALE---------------DLVRFFDPDILSGYEIHSSSWGYLIDRCH 727
Query: 393 V-LGLNLNQELSRI--TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFE 449
++ ELSR+ + K+ T + GR ++N+WR LR +NL YT E
Sbjct: 728 KGHDYDVEDELSRVDYNQSSKKKDRWGYTHATAFSITGRQMLNIWRPLRSSLNLLDYTLE 787
Query: 450 NIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSE 509
NI +HVLH+R+P +S+K T ++E K + +++ R+ +L+E + IG+T E
Sbjct: 788 NIAFHVLHQRLPFYSYKTRTEFYESMDETSKRCLLFYWITRLRVNFKLLETQNIIGKTIE 847
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
ARL GI FY VL RGSQ++VES ++RL + F+ +SPS Q + +A E +PL++EP
Sbjct: 848 QARLIGIDFYSVLYRGSQYKVESFLIRLCKSEQFILISPSRMQVRNQKALECIPLVMEPS 907
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKK 629
S Y P++VLDFQSLYPS+++AYNYC+ST +GRVE L ++ G ++ L
Sbjct: 908 SAFYKSPLLVLDFQSLYPSIVMAYNYCYSTIIGRVESLNTKNN-EIGITRYDIPEDLLTL 966
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ +TISP+G+ FV K +R +L KML++ILDTR ++K +MKE +L N+
Sbjct: 967 ISDYITISPNGIVFVKKELRKSVLAKMLKDILDTRFLMKSTMKELNDEHNLINM 1020
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
M PSS+ Y P++VLDFQSLYPS+++AYNYC+ST +GRVE L ++
Sbjct: 904 MEPSSA----FYKSPLLVLDFQSLYPSIVMAYNYCYSTIIGRVESLNTKNN 950
>gi|449302023|gb|EMC98032.1| hypothetical protein BAUCODRAFT_120942 [Baudoinia compniacensis UAMH
10762]
Length = 1737
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 267/531 (50%), Gaps = 68/531 (12%)
Query: 163 QSPPNKDSIHE----AEITHPDCSKSSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAM 218
Q PP +H A T D + ++ + S I+++ R + ID
Sbjct: 822 QPPPTHAEVHAWLKTAASTDADIDELDALEIDGPPTASQIKRK----NRPAPELSQIDGP 877
Query: 219 TPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT 278
T + ++ + H E Y++ +A+E+H SR L PDP DEV + + L
Sbjct: 878 TQKSKHGFKYSQKKKSTSVQH-ETGYMSTMALEVHINSRGDLAPDPERDEVSFVVWCLAD 936
Query: 279 CPPEEDR-KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYE 337
E++ K+GI ++ + +Q++ +E ++ + +E VR +DPDIL G+E
Sbjct: 937 EQMEDESVKMGIAVLDK-----------VQIDAEDSELDVINRMVEIVRTYDPDILTGFE 985
Query: 338 IETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN 397
+ SWGYL+ER + E N
Sbjct: 986 VHNSSWGYLIERARLQYE----------------------------------------YN 1005
Query: 398 LNQELSRITEVEKRNSSRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
L E SR+ +D + +++ GR IN+WR +R E+NL YT EN++
Sbjct: 1006 LPDEFSRMRSQSHGRFGKDADRWGFTHTSTVRITGRHTINVWRAMRSELNLLQYTMENVV 1065
Query: 453 YHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
+H+LH RIP + + LT W+ +++ + R + +++ + I RTSE AR
Sbjct: 1066 FHLLHRRIPHYPFSTLTRWYTSSKPKDLSKVLDYLITRTVLDLEILDANELIPRTSEQAR 1125
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
L G+ F+ V SRGSQF+VES+M R+++ +FV VSPS KQ A E LPL++EP+S
Sbjct: 1126 LLGVDFFSVFSRGSQFKVESLMFRIAKPESFVLVSPSRKQVGAQNALECLPLVMEPQSAF 1185
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y P++VLDFQSLYPSV+IAYN C+STCLGR+ ++ F D L+ ++
Sbjct: 1186 YNSPLLVLDFQSLYPSVMIAYNLCYSTCLGRITDWRGTNKLGFA--DFKREPGLLELVKD 1243
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ ISP+G+ +V +R +L KML EIL+TR+MVK MK K ++L+ L
Sbjct: 1244 KINISPNGMMYVKPEMRKSLLAKMLGEILETRVMVKSGMKVDKGDKTLQQL 1294
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 16/122 (13%)
Query: 84 SPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK +++ + M P S+ Y P++VLDFQSLYPSV+IAYN C+STCLG
Sbjct: 1160 SPSRKQVGAQNALECLPLVMEPQSA----FYNSPLLVLDFQSLYPSVMIAYNLCYSTCLG 1215
Query: 141 RVEHLGVSDSFPFGCIASRESNQSPPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIRK 200
R+ ++ F RE KD I + S + + P++ KS + K
Sbjct: 1216 RITDWRGTNKLGFADF-KREPGLLELVKDKI--------NISPNGMMYVKPEMRKSLLAK 1266
Query: 201 QL 202
L
Sbjct: 1267 ML 1268
>gi|359487804|ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 252/468 (53%), Gaps = 88/468 (18%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+T+L++EI A SR L+PDP YD + I + ++D + + ++ + + P R
Sbjct: 315 VTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQE---DDDSALEVFVLCRSNIEPCQR-- 369
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+++ +S K L S S EK LF FI
Sbjct: 370 --KLDGISGCKVLVS---------------------------------SEEKLLFDDFIN 394
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSR--------- 415
+ +DPDILIG++I+ S G+L ER LG+ L ++SR T E + +SR
Sbjct: 395 IICSFDPDILIGWDIQGGSLGFLAERASHLGIGLLNKISR-TPSETKTASRNFEIPEKRV 453
Query: 416 ----------------------DEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFEN 450
DE T + + GRIV+N+WRL+R E+ L YT E+
Sbjct: 454 ADEMLPENLVDDSVLLEEAIIEDEWGRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAES 513
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
+ VL ++IP ++LT W+ ++ ++E+ + R ++ QLD I RTSE+
Sbjct: 514 VAEAVLRQKIPSIRNRVLTKWFSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSEL 573
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES 570
AR+FGI F+ VLSRGSQ+ VES+ LRL+ NF+A+SP +Q A A E LPL++EPES
Sbjct: 574 ARVFGIDFFSVLSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLPLVMEPES 633
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS---- 626
Y DP++VLDFQSLYPS+IIAYN C+STCLG+V P L VSI S
Sbjct: 634 GFYADPVVVLDFQSLYPSMIIAYNLCYSTCLGKVA--------PSKADVLGVSIYSPDPH 685
Query: 627 -LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
L L+ + ++P+GV +V R G+LP++L+EIL TR+MVK++MK+
Sbjct: 686 ALHDLKDQILLTPNGVMYVPSKARKGVLPRLLEEILSTRIMVKKAMKK 733
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 5/44 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVS 148
Y DP++VLDFQSLYPS+IIAYN C+STCLG+V + LGVS
Sbjct: 635 FYADPVVVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVS 678
>gi|366991433|ref|XP_003675482.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
gi|342301347|emb|CCC69115.1| hypothetical protein NCAS_0C01250 [Naumovozyma castellii CBS 4309]
Length = 1473
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 250/457 (54%), Gaps = 65/457 (14%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEED-------RKVGIILIGQESE 297
LT +EIH R +PDP DEV I + C EE K GI+ + +E
Sbjct: 638 LTHFTLEIHVNCRNGKRPDPKEDEVNMIVW----CIEEETFPFDLSIAKEGIMALNKEGS 693
Query: 298 LP-----EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV 352
P E P+ + F E ++F D+++
Sbjct: 694 SPYEEKFERAASPVSVAFFETEFDMFDALT--------DLIL------------------ 727
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL-GLNLNQELSRITEVEKR 411
LF DPDIL G+E+ SWGY++ER ++ ++ E++R+ E K
Sbjct: 728 -----LF----------DPDILSGFEVHMSSWGYIIERCRIIHKFDIAVEIARVNERWK- 771
Query: 412 NSSRD---EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
N S+D ++ Q+ GR VIN+WR+LR E+NL YT ENI+Y+VLHER+P S+ L
Sbjct: 772 NKSKDVWGYTHSSGTQITGRHVINIWRVLRSELNLTQYTIENIVYNVLHERLPHFSFDTL 831
Query: 469 TCWWEHRTHLYKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
T W +L TV Y L R +RL+++ +FIG+T E ARL GI F+ V RGSQ
Sbjct: 832 TKLWTDTGNLCGLKTVIFYWLTRARMNVRLLQKQEFIGKTMEQARLIGIDFHSVFYRGSQ 891
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
F+VES ++R+ + ++V +S S KQ +A E +PL++EPES Y P+IVLDFQSLYP
Sbjct: 892 FKVESFLIRICKSESYVLISASKKQVRRQKALECVPLVMEPESAFYKSPLIVLDFQSLYP 951
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
S++IAYNYC+ST +GRV +L + G ++ L+ L+ ++TI+P+GV + +
Sbjct: 952 SIMIAYNYCYSTMIGRVRNLTTHGN-ELGVATFSLEKNLLRLLENDVTIAPNGVVYAKST 1010
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEY-KFSESLRNL 683
+R L KML EILD R+MVK+++ E K +E LR +
Sbjct: 1011 VRKSTLAKMLTEILDIRVMVKKTISELGKGNERLRRV 1047
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 31/36 (86%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y P+IVLDFQSLYPS++IAYNYC+ST +GRV +L
Sbjct: 936 FYKSPLIVLDFQSLYPSIMIAYNYCYSTMIGRVRNL 971
>gi|336371041|gb|EGN99381.1| hypothetical protein SERLA73DRAFT_90742 [Serpula lacrymans var.
lacrymans S7.3]
Length = 791
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/334 (39%), Positives = 216/334 (64%), Gaps = 10/334 (2%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
V +E EL + I+ V DPDI++G+E++T SWGY+ RG G + + ++R R
Sbjct: 22 VPDELELLNKVIDIVIDVDPDIVVGWEVQTASWGYVNSRGRHYGFEIGELIAR---APSR 78
Query: 412 NSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
N++ + ++ Q+ GR V N+WR+++ E NL YTFEN+ +H+L RIP +S+
Sbjct: 79 NNTGGNDQWGLRTSSTFQVIGRHVFNVWRIMQVEQNLGIYTFENVAFHILKRRIPRYSFS 138
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
LT W++ ++ + H R + ++ ++++ + + + +E AR+FG+ F+ V+SRGS
Sbjct: 139 TLTEWYKSSDPVHTSRLLRHLSERTSTVLDILDEAETVTKNAEFARVFGVDFFSVISRGS 198
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
QF+VES M R+++ +FV +SPS + A E +PLI+EP S Y P++VLDFQSLY
Sbjct: 199 QFKVESFMFRIAKPESFVLLSPSKEDVGKQNAAECMPLIMEPLSAFYNGPLVVLDFQSLY 258
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS++IAYNYC+STCLGRV + FG +L+ L+KLQ ++T++P+G+ +V
Sbjct: 259 PSIMIAYNYCYSTCLGRVGEFQGQNK--FGVTELHHPAGLLQKLQDHITVAPNGIMYVKS 316
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+R G+L +ML E+L+TR+MVKQ+MK + +++L
Sbjct: 317 DVRKGLLGRMLTELLETRVMVKQAMKSARGNKAL 350
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y P++VLDFQSLYPS++IAYNYC+STCLGRV + F
Sbjct: 244 FYNGPLVVLDFQSLYPSIMIAYNYCYSTCLGRVGEFQGQNKF 285
>gi|307106792|gb|EFN55037.1| hypothetical protein CHLNCDRAFT_6685, partial [Chlorella
variabilis]
Length = 732
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/315 (44%), Positives = 194/315 (61%), Gaps = 12/315 (3%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGL-NLNQELSRITEVEKRNSSRDEVKN-------T 421
DPDIL+GYE++ S GY ER LGL +L + LSR+ D + +
Sbjct: 18 DPDILLGYEVQRASLGYAAERAAALGLPSLLRALSRLPREGVGGGGSDNPADEYAWQTSS 77
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
L GRIV+N+WRL++ E+ L SY+FE+ VL R+P L W+ +W
Sbjct: 78 GLYCSGRIVLNVWRLMKDELKLTSYSFESCAAAVLQLRVPHVPQAQLHAWFAGGPGAARW 137
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
+ ++ R + L++QLD +GRT EMAR FGI F+ VLSRGSQ+RVE++M RL+
Sbjct: 138 RCLAYWARRARLNLALLDQLDLVGRTGEMARTFGIDFFSVLSRGSQYRVEAMMARLAHTQ 197
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
N++ V +Q A A E++PL++EP SRLYTDP++VLDFQSLYPS+IIAYN CFSTCL
Sbjct: 198 NYLLVHAGREQVARQAAMEAIPLVMEPRSRLYTDPLVVLDFQSLYPSMIIAYNLCFSTCL 257
Query: 602 GRVEHLGVSDSFP--FGCIDLNVSIRSLKK--LQQNLTISPSGVAFVDKSIRCGILPKML 657
GR H D P G ++ + SL + L ++P+GVAFV + R G+LP++L
Sbjct: 258 GRPAHAAAGDDPPPKLGAVEYGLPAGSLAGSLAPERLVVAPNGVAFVPREARPGVLPRLL 317
Query: 658 QEILDTRLMVKQSMK 672
EIL+TR+MVK +MK
Sbjct: 318 SEILNTRIMVKGAMK 332
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 36/46 (78%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 152
R RLYTDP++VLDFQSLYPS+IIAYN CFSTCLGR H D P
Sbjct: 225 RSRLYTDPLVVLDFQSLYPSMIIAYNLCFSTCLGRPAHAAAGDDPP 270
>gi|406608056|emb|CCH40490.1| DNA polymerase zeta subunit [Wickerhamomyces ciferrii]
Length = 1409
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 245/442 (55%), Gaps = 78/442 (17%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
++TVL VE+H+ +R L+PDP YDEV AIF+
Sbjct: 632 HMTVLIVEVHSNTRESLRPDPKYDEVSAIFWKT--------------------------- 664
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
MN ++ + ++ NV+Q PD + HF+S E E+F F
Sbjct: 665 ----MNGSTHRE---GVYLLNVKQPVPDKEV--------------THFIS-ELEMFESFT 702
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDE---VK 419
VR++DPDI+ G+E+++ SWGYL+ER + + ELSR+ + N D
Sbjct: 703 TFVRKFDPDIISGFEVQSGSWGYLIERARAIYEFDFVPELSRV-HFKAHNKMGDHWGYTH 761
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLY 479
+ +++ GR V+N+WR LR +NL YT EN+ YH LHER+P +S K LT ++
Sbjct: 762 TSSIKVCGRQVLNIWRPLRR-LNLLKYTIENVAYHALHERLPHYSNKTLTKMFQD----- 815
Query: 480 KWMTVE-HYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
++++ HY ++ RLI+ + I R +E ARL GI F +V RGSQ++VES M+R++
Sbjct: 816 DFLSLSSHYFKKLEIDGRLIDTQELITRAAEEARLIGIDFNDVYYRGSQYKVESFMVRMA 875
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ NF+ SPS +Q + E +PL++EP S Y P+IVLDFQSLYPS++IAYNYC+S
Sbjct: 876 KAENFMLFSPSKRQVRKQKPLECIPLVMEPISAYYKSPLIVLDFQSLYPSIVIAYNYCYS 935
Query: 599 TCLGRV-------EHLGVSD-SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
T LGR+ H+G S P G LK L+ ++ ISP+G+ F S+R
Sbjct: 936 TLLGRLRNYSNGPNHIGTSHVKHPPGL---------LKLLENDINISPNGLMFAKSSVRK 986
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
+L KML+EILDTR MVK +MK
Sbjct: 987 SLLAKMLEEILDTRFMVKSTMK 1008
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 7/45 (15%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-------EHLGVS 148
Y P+IVLDFQSLYPS++IAYNYC+ST LGR+ H+G S
Sbjct: 910 YKSPLIVLDFQSLYPSIVIAYNYCYSTLLGRLRNYSNGPNHIGTS 954
>gi|296088359|emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 245/438 (55%), Gaps = 57/438 (13%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+T+L++EI A SR L+PDP YD + I + ++D + + ++ + + P R
Sbjct: 901 VTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQE---DDDSALEVFVLCRSNIEPCQR-- 955
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+++ +S K L S S EK LF FI
Sbjct: 956 --KLDGISGCKVLVS---------------------------------SEEKLLFDDFIN 980
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-LNQELSRITEVEKRNSSRDEVKNTQ- 422
+ +DPDILIG++I+ S G+L ER L L + L + + + DE T
Sbjct: 981 IICSFDPDILIGWDIQGGSLGFLAERASHLADEMLPENLVDDSVLLEEAIIEDEWGRTHA 1040
Query: 423 --LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ + GRIV+N+WRL+R E+ L YT E++ VL ++IP ++LT W+ +
Sbjct: 1041 SGVHVGGRIVLNVWRLMRGEIKLNMYTAESVAEAVLRQKIPSIRNRVLTKWFSSGPGRAR 1100
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
+ ++E+ + R ++ QLD I RTSE+AR+FGI F+ VLSRGSQ+ VES+ LRL+
Sbjct: 1101 YRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYHVESMFLRLAHT 1160
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
NF+A+SP +Q A A E LPL++EPES Y DP++VLDFQSLYPS+IIAYN C+STC
Sbjct: 1161 QNFLAISPGPQQVATQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCYSTC 1220
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRS-----LKKLQQNLTISPSGVAFVDKSIRCGILPK 655
LG+V P L VSI S L L+ + ++P+GV +V R G+LP+
Sbjct: 1221 LGKVA--------PSKADVLGVSIYSPDPHALHDLKDQILLTPNGVMYVPSKARKGVLPR 1272
Query: 656 MLQEILDTRLMVKQSMKE 673
+L+EIL TR+MVK++MK+
Sbjct: 1273 LLEEILSTRIMVKKAMKK 1290
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 5/44 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVS 148
Y DP++VLDFQSLYPS+IIAYN C+STCLG+V + LGVS
Sbjct: 1192 FYADPVVVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVS 1235
>gi|350578363|ref|XP_003480351.1| PREDICTED: DNA polymerase zeta catalytic subunit [Sus scrofa]
Length = 1024
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 165/204 (80%)
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
+W V+HY+ RV G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ+RVES+MLR+++
Sbjct: 409 EWKMVDHYISRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAK 468
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
N++ V+PS++QR+ MRAP+ +PLI+EPESR Y++ ++VLDFQSLYPS++IAYNYCFST
Sbjct: 469 PMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFST 528
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
CLG VE+LG D F FGC L V L +++ ++T+SP+G+AFV S+R G+LP+ML+E
Sbjct: 529 CLGHVENLGKHDEFKFGCTSLRVPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEE 588
Query: 660 ILDTRLMVKQSMKEYKFSESLRNL 683
IL TRLMVKQSMK YK +L +
Sbjct: 589 ILKTRLMVKQSMKAYKQDRALSRM 612
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASR 159
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R
Sbjct: 500 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKHDEFKFGCTSLR 550
>gi|356504040|ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
Length = 2793
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 277/542 (51%), Gaps = 93/542 (17%)
Query: 179 PDCSKSSQIDFNPDLF-------KSFIRKQLETPKRRIC--DSYAIDAMT-PDTTGDY-- 226
P C+ ++ P L+ K + +T + + C DS I ++ PD +
Sbjct: 1012 PKCASETEPPLRPKLYQDSDTENKPPCNGEGQTERVKACLDDSQDISQISDPDRKSSFTP 1071
Query: 227 --QMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEED 284
Q+G + V + LT+L++EI A R L PDP +D + + + D
Sbjct: 1072 LSQIGFRDPASVGCGQQ---LTLLSIEILAECRGDLLPDPQFDAINIVALGFQN---DGD 1125
Query: 285 RKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWG 344
V ++++ L S ++ R +D L G +I F+
Sbjct: 1126 SIVEVLVL------------------------LHSKYVPCQRSFDG--LFGCKILVFT-- 1157
Query: 345 YLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR 404
+EK L FI+ V DPDIL+G++I+ S G+L ER LGL L +SR
Sbjct: 1158 ---------DEKLLLKEFIKIVSSSDPDILMGWDIQGSSLGFLAERASHLGLGLLNNVSR 1208
Query: 405 ------------------ITEVEKRNS-SRD--------------EVKNTQLQMPGRIVI 431
I E++ ++ SRD + + + GRIV+
Sbjct: 1209 TPSESLIASEDSKTYEKDILELDIHDTPSRDCCVPENSIIEDEWGRTHASGVHIGGRIVL 1268
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
N WRL+R EV L Y+ E + VL +IP K+LT W+ ++ +++ + R
Sbjct: 1269 NAWRLIRGEVKLNLYSVEAVAESVLRRKIPSFHHKVLTKWFSSGPGRARYRCIKYVIERA 1328
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
+ +I QLD + RTSE+AR+FGI+F+ VLSRGSQ+RVES+ LRL+ N++A+SP +
Sbjct: 1329 KLNLEIINQLDMVNRTSELARVFGIEFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGKQ 1388
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
Q A A E LPL++EPES Y+DP++VLDFQSLYPS+IIAYN CF TCLG+V S
Sbjct: 1389 QVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---ASK 1445
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ G + L+ L+ + ++P+GV FV +R GILP++L+EIL TR+MVKQ++
Sbjct: 1446 ANTLGVSSFSPEQHVLQDLKDQILLTPNGVMFVPSKVRRGILPRLLEEILTTRIMVKQAI 1505
Query: 672 KE 673
K+
Sbjct: 1506 KK 1507
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 5/48 (10%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVSDSFP 152
Y+DP++VLDFQSLYPS+IIAYN CF TCLG+V LGVS P
Sbjct: 1409 FYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVASKANTLGVSSFSP 1456
>gi|449551085|gb|EMD42049.1| hypothetical protein CERSUDRAFT_90650 [Ceriporiopsis subvermispora B]
Length = 1717
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 206/342 (60%), Gaps = 4/342 (1%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS+E +L + I+ VR DPDI+ G++I+T SWGYL R G + +++SR
Sbjct: 911 VSSELDLLNTTIDIVRALDPDIVTGWQIQTASWGYLNARAQTYGYEIGEQISRAPGRPAG 970
Query: 412 NSSRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
+ T ++ GR V+N WR++R E + SYTFEN ++ +LH+R P ++ + LT
Sbjct: 971 GGTDQWGARTTSTFKVTGRHVLNTWRIVRSENSFTSYTFENAVFQILHKRTPYYTLQTLT 1030
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W+ + ++ R ++ ++ + + + +E AR+FG+ F+ VLSRGSQF+
Sbjct: 1031 DWYNSPVPARTIQLLRYFSHRTASVLEVLHAAEVVTKNAEFARIFGVDFFSVLSRGSQFK 1090
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
VES M R+++ +FV +SPS + A E +PLI+EP S Y+ P++VLDFQSLYPS+
Sbjct: 1091 VESFMFRIAKPESFVLLSPSKQDVGKQNAAECMPLIMEPLSAFYSSPLVVLDFQSLYPSI 1150
Query: 590 IIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIR 649
+IAYNYC+STCLGRV + FG DL + L L+ ++ ++ +G+ +V +R
Sbjct: 1151 MIAYNYCYSTCLGRVTDF--KGQYKFGVTDLRLPPGLLDTLKDHINVAANGIMYVKPEVR 1208
Query: 650 CGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
G+L +ML E+LDTR+MVKQ+MK K + L+ + + L
Sbjct: 1209 KGLLGRMLTELLDTRVMVKQAMKGVKEDKGLKRVLEARQLAL 1250
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 6/46 (13%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE------HLGVSD 149
Y+ P++VLDFQSLYPS++IAYNYC+STCLGRV GV+D
Sbjct: 1133 FYSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVTDFKGQYKFGVTD 1178
>gi|224123192|ref|XP_002319017.1| predicted protein [Populus trichocarpa]
gi|222857393|gb|EEE94940.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 203/321 (63%), Gaps = 12/321 (3%)
Query: 369 WDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR------ITEVEKRNSSRDEVKNTQ 422
+DPDIL+G++++ S G+L ER LG+ L +SR I E+ NS +DE T
Sbjct: 7 FDPDILMGWDVQGGSLGFLAERAAHLGIGLLNNISRTPSEANIDVGERENSGKDEWGRTH 66
Query: 423 ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLY 479
+ + GR+V+N+WRL+R EV L YT E + +L +IP +K+LT W+
Sbjct: 67 ASGVHVGGRVVLNVWRLMRGEVKLNMYTVEAVGEALLRRKIPSIPYKVLTKWFASGPGRA 126
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
++ +E+ + R + ++ QLD I RTSE+AR+FGI F+ VLSRGSQ+RVES+ LRL+
Sbjct: 127 RYRCIEYMIDRAKLNLEIMNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAH 186
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
N++A+SP +Q A A E LPL++EPES Y DP++VLDFQSLYPS+IIAYN CF T
Sbjct: 187 TQNYLAISPGNQQVASQPAMECLPLVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFCT 246
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
CLG V S + G + L+ L+ + ++P+G +V IR G+LP++L+E
Sbjct: 247 CLGNV---APSKANTLGVSSFSTDPSVLRDLKDKILLTPNGTMYVPSEIRKGVLPRLLEE 303
Query: 660 ILDTRLMVKQSMKEYKFSESL 680
IL TR+M+KQ+MK+ S+ +
Sbjct: 304 ILSTRIMLKQAMKKLAPSQQV 324
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVS 148
Y DP++VLDFQSLYPS+IIAYN CF TCLG V LGVS
Sbjct: 219 FYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVAPSKANTLGVS 262
>gi|367000956|ref|XP_003685213.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
gi|357523511|emb|CCE62779.1| hypothetical protein TPHA_0D01380 [Tetrapisispora phaffii CBS 4417]
Length = 1503
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 261/477 (54%), Gaps = 40/477 (8%)
Query: 222 TTGDYQMGLDNLNEVTSHVENYY--LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTC 279
+ G ++ +D+ +T N + LT L +E+H SR PDP +D ++ I + +
Sbjct: 644 SIGGFRYAMDSETSITKQKSNIHSVLTHLTLEVHTQSRHDKVPDPKHDRIQLIIWKV--- 700
Query: 280 PPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIE 339
+ED + P +N +S E I + DP++L I
Sbjct: 701 --DED------------------SFPFDLN-ISTE----GVMIVVEEKTDPELL---GII 732
Query: 340 TFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNL 398
T + G L + S E E+F I+ + +DPDIL G+E++ SWGY+ ER +V +
Sbjct: 733 TSAIGNLPVGIYYS-ELEMFDAIIDLILFFDPDILSGFEVQKSSWGYMSERCTHVYKFDF 791
Query: 399 NQELSRITEV--EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
E+ R T+ ++NS T + +PGR V+N+WR +R EVNL+ YT E + Y VL
Sbjct: 792 LNEICRATKYTNNRKNSKWGTSHTTSISVPGRHVLNIWRAMRSEVNLKQYTVEILAYEVL 851
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFG 515
H+R+P S + LT W R + K TV Y I RV + L+++ D+I R E ARL G
Sbjct: 852 HKRLPRFSSQYLTELWNSR-DITKIRTVVFYWINRVRVNVSLLKKQDYIERIIEQARLIG 910
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
I FY V RGSQF VES+++RL + +F+ +SPS + + E +PL++EP+S Y
Sbjct: 911 IDFYSVYYRGSQFNVESVLVRLCKSESFLLLSPSKDDVRNQKPLECVPLVMEPDSLFYKS 970
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
P++VLDFQSLYPSV++AYNYC+ST LGRV + + G +N L L+ ++
Sbjct: 971 PLVVLDFQSLYPSVMMAYNYCYSTMLGRVNEMSYVGN-KIGVTSINYDENILTLLKDDII 1029
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
ISP+G+AFV S+R L KML EIL TR +VK++MK+ S N M + L +
Sbjct: 1030 ISPNGIAFVKPSVRKSTLTKMLNEILTTRFLVKKTMKDLPAENSKLNRLMNSRQLAL 1086
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y P++VLDFQSLYPSV++AYNYC+ST LGRV +
Sbjct: 967 FYKSPLVVLDFQSLYPSVMMAYNYCYSTMLGRVNEM 1002
>gi|255542648|ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
Length = 2066
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 247/463 (53%), Gaps = 78/463 (16%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT+L++E+ A SR L+PDP +D + + + D V + ++
Sbjct: 336 LTMLSIEVQAESRGDLRPDPRFDAINTVALAFQN---DNDSTVEVQVL------------ 380
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+ + KE ++ + S +L + S E L + FI
Sbjct: 381 ------LHSNKESYAR----------------SSDGLSVNKVL---YFSEEVHLVTHFIR 415
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRD-EVKNTQL 423
+ DPDIL+G++I+ S G+L ER LG+ L +SR T +E +R+ E+ + ++
Sbjct: 416 IIGSVDPDILMGWDIQGGSLGFLAERAAHLGMGLLNNISR-TPLEANIGARETEISDKEI 474
Query: 424 ---------------------------------QMPGRIVINLWRLLRHEVNLQSYTFEN 450
+ GRIV+N+WRL+R+EV L YT E
Sbjct: 475 LATMLDESLVAESALVEQAVIEDEWGRTHASGVHVGGRIVLNIWRLIRNEVKLNLYTVEA 534
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
+ VL +IP +++LT W+ ++ +E+ + R + ++ QLD I RTSE+
Sbjct: 535 VGEAVLRRKIPSIPYRVLTKWFSSGPGRARYRCIEYMVHRAKLNLEIMNQLDMINRTSEL 594
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES 570
AR+FGI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E LPL++EPES
Sbjct: 595 ARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPES 654
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y DP++VLDFQSLYPS+IIAYN CF TCLG V V+ G + R L L
Sbjct: 655 GFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVSSSKVN---TLGVSSFSPDPRVLGDL 711
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ + ++P+GV +V +R G+LP++L+EIL TR+MVKQ+MK+
Sbjct: 712 KDEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKK 754
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 5/48 (10%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG-----RVEHLGVSDSFP 152
Y DP++VLDFQSLYPS+IIAYN CF TCLG +V LGVS P
Sbjct: 656 FYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVSSSKVNTLGVSSFSP 703
>gi|393240252|gb|EJD47779.1| hypothetical protein AURDEDRAFT_144423 [Auricularia delicata
TFB-10046 SS5]
Length = 1503
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 248/459 (54%), Gaps = 70/459 (15%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY---------YLYTCPPEEDRKVGIIL 291
++ +++V+A+E+ A+S+ +PDP +D V A+FY + T + GII
Sbjct: 665 DSSHMSVMALEVFALSQGDKQPDPQHDTVCAVFYAFSPSSTGTFESTSVRRQAYTTGIIA 724
Query: 292 IGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
+G + DP L +E+E
Sbjct: 725 VGNAT-------------------------------LDPKRLREHEMEV----------- 742
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
V +E +L + I+ V + DPDI+ G++++ SWGYL R L+ R R
Sbjct: 743 VKSELDLLNRVIDLVLELDPDIVAGWDLQVASWGYLRARANTYSLDFLDMCGRAGPPTGR 802
Query: 412 NSSRD--EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
S + + +++ GR V+N+WR++R ++ L SY+FEN+ +HVL R+P + K LT
Sbjct: 803 QGSENYSATHTSIIRLVGRHVLNVWRIMRVDMALSSYSFENVSFHVLKRRMPHYPAKTLT 862
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W + L+ + ++ R ++ ++++ + I + +E AR+FGI F+ +SRGSQ++
Sbjct: 863 EWTKSNLPLHNGRVLAYFADRTACVLDILDETETITKHAESARVFGIDFFSSISRGSQYK 922
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
VES + R+ + +FV +SPS + H A + PLILEP + Y+ P++VLDFQSLYPS+
Sbjct: 923 VESFLFRIGKPESFVILSPSGDEVGHQNAIYATPLILEPFAAYYSSPLVVLDFQSLYPSI 982
Query: 590 IIAYNYCFSTCLGRVEH------LGVSDSF--PFGCIDLNVSIRSLKKLQQNLTISPSGV 641
+IAYNYC+STCLGRVE LGV F P G L KL+ ++ ++P+G+
Sbjct: 983 MIAYNYCYSTCLGRVEQQNGHWKLGVLPEFELPPGL---------LGKLEDHVNVAPNGI 1033
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+ K +R G+L +MLQE+LDTR+MVKQ+MK K + L
Sbjct: 1034 MYAKKEVRPGLLGRMLQELLDTRIMVKQAMKSSKGDKGL 1072
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH------LGVSDSF--PFGCIASRESN 162
Y+ P++VLDFQSLYPS++IAYNYC+STCLGRVE LGV F P G + E +
Sbjct: 966 YSSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVEQQNGHWKLGVLPEFELPPGLLGKLEDH 1025
>gi|384253877|gb|EIE27351.1| DNA polymerase zeta [Coccomyxa subellipsoidea C-169]
Length = 778
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 205/337 (60%), Gaps = 25/337 (7%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN--LNQELSRI----T 406
+E+ L + VR DPDIL+GYE++ S GYL +R L L ++LSR +
Sbjct: 5 GSEEALLDALVGAVRALDPDILVGYEVQQGSLGYLNDRATTLARPEPLLRQLSRTPTVSS 64
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-LHSW 465
VE+RN + + + + GRIV+NLWRLLR E+ L+ YTFE + VL R P + +W
Sbjct: 65 MVERRNDEYGVLHASGIHVAGRIVLNLWRLLRSELKLRIYTFEACVAAVLQLRTPHIPAW 124
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
+L+ W++ +W V++ + R + ++EQLD GRT EMAR FGI F+ VL+RG
Sbjct: 125 -VLSQWFQGGPGGGRWRCVQYIVRRARLSLAMMEQLDITGRTGEMARTFGIDFFSVLTRG 183
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQ+RVE++M RL+ N++ +PS +Q + A E++PL++EPESRLY DP++VLDFQSL
Sbjct: 184 SQYRVEAMMARLAHTQNYLLPAPSTEQTKNQPAMEAIPLVMEPESRLYVDPVVVLDFQSL 243
Query: 586 YPSVIIAYNYCFSTCLGRVE---------HLGVSD-SFPFGCIDLNVSIRSLKKLQQNLT 635
YPS IIAYN CFSTCLGR LG P G + V+ L
Sbjct: 244 YPSQIIAYNLCFSTCLGRPAHAAAAATPLRLGAQVFGLPKGSLSGAVA-------PDKLI 296
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++P+GVA+ R G+LP++L EIL TR+MVK +MK
Sbjct: 297 VAPNGVAYAPPEARQGVLPRLLNEILATRIMVKAAMK 333
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 7/62 (11%)
Query: 83 PSPTR---KNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
P+P+ KN+ + M P S RLY DP++VLDFQSLYPS IIAYN CFSTCL
Sbjct: 204 PAPSTEQTKNQPAMEAIPLVMEPES----RLYVDPVVVLDFQSLYPSQIIAYNLCFSTCL 259
Query: 140 GR 141
GR
Sbjct: 260 GR 261
>gi|414888041|tpg|DAA64055.1| TPA: hypothetical protein ZEAMMB73_677675 [Zea mays]
Length = 1602
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 213/353 (60%), Gaps = 30/353 (8%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--------- 405
EK++ + I + DPDIL+G+EI+ S G+L ER LG+ L + +SR
Sbjct: 799 EKDVLNNLISAICSIDPDILVGWEIQLGSLGFLAERAAYLGIGLLKRISRTPHELNHPPK 858
Query: 406 ------TEVEKRNSSRDEVKN------------TQLQMPGRIVINLWRLLRHEVNLQSYT 447
++V SS D++ + + + + GRIV+NLWRL+R EV L +Y+
Sbjct: 859 IPVDNSSQVLSETSSADDIIDDVSENDWSHTHASGIHVGGRIVLNLWRLMRAEVKLNNYS 918
Query: 448 FENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRT 507
E + VL +IPL ++L W+ + +E+ R + ++ Q+D + RT
Sbjct: 919 LEAVADEVLRRKIPLIPSRILNRWFATGPGRGRHRCIEYISNRARINLEIMNQMDLVNRT 978
Query: 508 SEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILE 567
SE+AR+FGI F+ VLSRGSQ+RVES++LRL+ N++A+SP +Q A A E LPL++E
Sbjct: 979 SELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVME 1038
Query: 568 PESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSL 627
PES Y DP++VLDFQSLYPS+IIAYN C+STCLG+V S S G + +L
Sbjct: 1039 PESAFYPDPVVVLDFQSLYPSMIIAYNLCYSTCLGKV---FPSKSDVLGVSSYSADPHTL 1095
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
L+ L ++P+GV +V IR G+LP++L+EIL TR+MVKQ+MK+ S+ +
Sbjct: 1096 VDLKNQLLLTPNGVLYVQPEIRKGVLPRLLEEILSTRIMVKQAMKKLSPSQQV 1148
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 5/44 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVS 148
Y DP++VLDFQSLYPS+IIAYN C+STCLG+V + LGVS
Sbjct: 1043 FYPDPVVVLDFQSLYPSMIIAYNLCYSTCLGKVFPSKSDVLGVS 1086
>gi|410082397|ref|XP_003958777.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
gi|372465366|emb|CCF59642.1| hypothetical protein KAFR_0H02330 [Kazachstania africana CBS 2517]
Length = 1499
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 255/449 (56%), Gaps = 48/449 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKV---GIILIGQESELPEV 301
LT ++EIH +R LKPDP +D+V IF+ + D V GI+++ E
Sbjct: 663 LTHFSLEIHVNTRDDLKPDPLHDQVSIIFWKIDDESYPFDFGVSSEGIMVLHDE------ 716
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
E S +++ P F +E +F
Sbjct: 717 -----------REDGTLSKMLQDAAGSVP------------------VAFYESEFMMFDA 747
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGY-VLGLNLNQELSRITEVEKRNSSRD---E 417
+ V +DPDIL GYE+ SWGY++ER V N+ +E+SR+ + +NSS D
Sbjct: 748 LTDLVLLFDPDILSGYEVHLSSWGYIIERCIKVHKFNIIEEISRVIS-KGKNSSYDFWGY 806
Query: 418 VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+T + + GR ++N+WR+L ++ L YT ENI Y++LH+R+P S + LT +W ++
Sbjct: 807 THSTGITVTGRHILNIWRILSSDLQLTQYTVENIAYNLLHKRLPHFSNRNLTEFWNNKRS 866
Query: 478 LYKWMTV-EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
K TV +++L RV L++ DFI RT ARL G+ F V RGSQ+RVES ++R
Sbjct: 867 FSKIKTVLQYWLTRVRINFELLKAQDFIARTMVQARLIGVDFQSVYYRGSQYRVESFLVR 926
Query: 537 LSRLNNFVAVSPSIKQRAHMRAP-ESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
+ + +F+ VSPS KQ+ + P E +PLI+EPES Y P++VLDFQSLYPS++IAYNY
Sbjct: 927 VCKGESFILVSPS-KQKVREQKPLECVPLIMEPESAFYKSPMLVLDFQSLYPSIMIAYNY 985
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPK 655
C+ST LGRV + + D+ G + + +L+ L+ ++TI+P+G+ FV+ SIR L K
Sbjct: 986 CYSTLLGRVREMQLGDN-EVGVSSVPIKENTLRLLKDDVTIAPNGLVFVNSSIRKSTLAK 1044
Query: 656 MLQEILDTRLMVKQSMKEYKF-SESLRNL 683
ML ++LD R+MVK+++ E +++LRNL
Sbjct: 1045 MLADVLDIRVMVKKTISELGSENDTLRNL 1073
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P++VLDFQSLYPS++IAYNYC+ST LGRV + + D+
Sbjct: 962 FYKSPMLVLDFQSLYPSIMIAYNYCYSTLLGRVREMQLGDN 1002
>gi|159472581|ref|XP_001694423.1| DNA polymerase zeta [Chlamydomonas reinhardtii]
gi|158276647|gb|EDP02418.1| DNA polymerase zeta [Chlamydomonas reinhardtii]
Length = 729
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/336 (41%), Positives = 201/336 (59%), Gaps = 24/336 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN--LNQELSRITEV--- 408
+E L F + DPD++ G++++ S GYL ER LGL L + R
Sbjct: 1 DEPSLLRAFAAALSSLDPDVVCGWDVQRHSLGYLAERAAALGLAPPLLRAAGRTPGTSSV 60
Query: 409 -EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
E++N + + + GR+++NLWR+LR E+ L SYTFE+ VL R+P +
Sbjct: 61 KERQNDEWGALHASGFHVTGRVLLNLWRVLRGELKLGSYTFESCAAAVLGLRVPRVREQQ 120
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
L W+ +W T+ R + + EQLD +GRT+EMAR FGI F+ VLSRGSQ
Sbjct: 121 LALWFAAGPSAGRWRTLSWLCRRCRLQLAMAEQLDLVGRTAEMARTFGIDFFSVLSRGSQ 180
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
+RVES+++RL+ NN++ +PS +Q A E+LPL++EPESR+Y P++VLDFQSLYP
Sbjct: 181 YRVESLLVRLAHTNNYIMPTPSREQVGGQPAMEALPLVMEPESRMYASPVVVLDFQSLYP 240
Query: 588 SVIIAYNYCFSTCLGRVEH---------LGVSD-SFPFGCIDLNVSIRSLKKLQQNLTIS 637
S +IAYN C+STC+GR H LGV+ S+P ++L IS
Sbjct: 241 SQVIAYNLCYSTCVGRPMHARAGGTPVRLGVTQYSYPAPAAGTATP--------EDLVIS 292
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
P+GVA+V +R G+LP+ML+EILDTR+M+K +MK+
Sbjct: 293 PNGVAYVSPQVRPGVLPRMLREILDTRVMIKGAMKK 328
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 83 PSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
P+P+R+ + + ++ M P S R+Y P++VLDFQSLYPS +IAYN C+STC+
Sbjct: 199 PTPSREQVGGQPAMEALPLVMEPES----RMYASPVVVLDFQSLYPSQVIAYNLCYSTCV 254
Query: 140 GRVEHLGVSDSFPFGCIASRESNQSPPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIR 199
GR H + P ++ S +P + E + P+ P + +R
Sbjct: 255 GRPMHARAGGT-PVRLGVTQYSYPAPAAGTATPEDLVISPNGVAYVSPQVRPGVLPRMLR 313
Query: 200 KQLETPKRRICDSYAIDAMTPD 221
+ L+T R+ A+ + P+
Sbjct: 314 EILDT---RVMIKGAMKKVPPE 332
>gi|255713872|ref|XP_002553218.1| KLTH0D11682p [Lachancea thermotolerans]
gi|238934598|emb|CAR22780.1| KLTH0D11682p [Lachancea thermotolerans CBS 6340]
Length = 1500
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 252/465 (54%), Gaps = 38/465 (8%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
ID T Y+ +N + + ++ L+ L +EI A S+A PDP +D V+ IF+
Sbjct: 637 IDFKTMSNERGYKFKSNNSLKGLNSGDHNPLSHLTLEIFATSKANRLPDPNFDPVQLIFW 696
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ D I IG + T+ I ++ E S N W +
Sbjct: 697 KI-------DPDSFPIDIG-------ISTEGIMAYHEKDDAEFISHL--NSASWSTPVA- 739
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYV 393
F +E+E+ + + V DPDI+ G+E+ + SWGYL+ER
Sbjct: 740 ----------------FFQSEEEMINGVADLVLLLDPDIISGFELHSSSWGYLIERLESA 783
Query: 394 LGLNLNQELSRIT--EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENI 451
+L +E++R+ KR ++ + + GR +N+WRLLR +NL YT ENI
Sbjct: 784 YERDLCEEIARVKYKTFNKRKDVWGFSHDSGIHIAGRHTLNIWRLLRSGLNLLKYTLENI 843
Query: 452 MYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT-VEHYLIRVTGIIRLIEQLDFIGRTSEM 510
+HVLHER+P S LT WE R+++ T + ++ RV ++L+ I +T E
Sbjct: 844 TFHVLHERLPHFSPSALTSLWESRSNITALTTLISYWKKRVNINMKLLHSQQTINQTIEQ 903
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES 570
ARL GI FY V+SRGSQ++VES+++RL + +F+ +SPS Q +A E +PL++EPES
Sbjct: 904 ARLIGIDFYSVISRGSQYKVESVLMRLCKCEHFLVLSPSKTQVRDQKALECIPLVMEPES 963
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y P++VLDFQSLYPS++I YNYC+ST +G V H S G + + L +L
Sbjct: 964 AFYKSPLVVLDFQSLYPSIMIGYNYCYSTIVGTV-HEYNSKKTAIGASKVKFARGLLHEL 1022
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+ +LTISP+GV ++ +S+R +L KML +IL TRLM+K +M + K
Sbjct: 1023 EDHLTISPNGVMYLKESVRKSMLAKMLTDILHTRLMIKATMSDLK 1067
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P++VLDFQSLYPS++I YNYC+ST +G V
Sbjct: 965 FYKSPLVVLDFQSLYPSIMIGYNYCYSTIVGTV 997
>gi|299755533|ref|XP_002912108.1| REV3 [Coprinopsis cinerea okayama7#130]
gi|298411267|gb|EFI28614.1| REV3 [Coprinopsis cinerea okayama7#130]
Length = 1574
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 60/441 (13%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
T+L++E+ A + PDP +E+ A+FY L T G+ S
Sbjct: 740 FTILSLEVFAPTGDGGLPDPEKNEIAAVFYALQTA-------------GETS-------- 778
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
IQ ++ N DP L IE + +E +L + ++
Sbjct: 779 -IQAAIMAV----------NAPPSDPRRLRERSIE-----------YAHSEIDLINNIVD 816
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE--VEKRNSSRDEVKNTQ 422
V DPDI+ G+EI+ GL+L++ + R + N K +
Sbjct: 817 AVVDLDPDIITGWEIQK-------------GLDLSELIGRAPHRYAGRSNDQWGFRKTST 863
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWM 482
Q GR V N WR++R E L Y+FEN+++HVL R P +S + L+ W+ + +
Sbjct: 864 FQAVGRHVFNTWRIMRSEQTLTMYSFENVVFHVLRRRFPKYSQETLSRWYRSSVPAHTFR 923
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
++ + ++ ++E+ + + +T+E AR+FGI F+ V+SRGSQF+VES MLR+++ +
Sbjct: 924 VFDYLQKKSCMVLEILEETEVVTKTAEFARVFGIDFFSVISRGSQFKVESFMLRIAKPES 983
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
FV +SPS A E +PLI+EP S YT P+IVLDFQSLYPSV+IAYNYC+STCLG
Sbjct: 984 FVLISPSKADVGKQNAAECMPLIMEPNSAFYTSPMIVLDFQSLYPSVMIAYNYCYSTCLG 1043
Query: 603 RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILD 662
RV H ++ FG LN+ L L+ ++T++P+G+ +V +R G+L +ML E+LD
Sbjct: 1044 RVHHF--QGTWKFGVDKLNLPEGLLGYLKDDITVAPNGIMYVKSKVRQGLLGRMLTELLD 1101
Query: 663 TRLMVKQSMKEYKFSESLRNL 683
TR+MVKQ+MK K ++L+ +
Sbjct: 1102 TRVMVKQAMKGVKNDKALKRV 1122
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 4/46 (8%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
M P+S+ YT P+IVLDFQSLYPSV+IAYNYC+STCLGRV H
Sbjct: 1007 MEPNSA----FYTSPMIVLDFQSLYPSVMIAYNYCYSTCLGRVHHF 1048
>gi|66824397|ref|XP_645553.1| DNA polymerase zeta catalytic subunit [Dictyostelium discoideum AX4]
gi|60473728|gb|EAL71668.1| DNA polymerase zeta catalytic subunit [Dictyostelium discoideum AX4]
Length = 2701
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 229/403 (56%), Gaps = 70/403 (17%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPE 300
+N LT+L+VEIH SR L P+P +D +++I Y C +E Q E+
Sbjct: 1712 QNQNLTILSVEIHCNSRDNLNPNPEFDSIQSIIY----CIRDE----------QSIEIEG 1757
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
+ + I+ + N+ YE E S+G + NE ELF
Sbjct: 1758 DQYQDIKGILMVNDGH-------------------YENENNSYGLNCFIKVLHNEFELFK 1798
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---TEVEKRNSSRDE 417
F+E +R +D DIL+G+E++ S GYL+ER LGL+L E+SR+ T + +N++ +
Sbjct: 1799 SFVELIRSYDIDILVGFEVQMSSIGYLIERANQLGLSLCDEISRVISNTGLTGQNTTTTK 1858
Query: 418 VKN--------------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
N T +++ GRIV+NLWRLLRHE+ L +YT++N+ +HVL+
Sbjct: 1859 GANRTKRTNYFSKDRDQYSFEHFTGMKIIGRIVLNLWRLLRHEITLDNYTYQNLCFHVLN 1918
Query: 458 ERIPLHSWKLLTCWW--------------EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDF 503
+R +S+K LT W+ + +W T+E+YL + LI D
Sbjct: 1919 KRQEEYSFKKLTNWYGGGGGSSNTFQQHQHQHQYQQRWRTLEYYLKKCENNFNLIYAFDL 1978
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
I RTSE +R++GI F VLSRGSQ+ VES++LRL++ NF+ +SPS ++ PES+P
Sbjct: 1979 IQRTSEFSRVYGIDFNSVLSRGSQYTVESMLLRLTKPENFILLSPSREEVLSQPMPESIP 2038
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 606
L+++P +RLY P++VLDFQSLYPS++IAYNYC+STCLG+V++
Sbjct: 2039 LVMDPITRLYNSPVVVLDFQSLYPSIMIAYNYCYSTCLGKVQN 2081
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 34/36 (94%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
RLY P++VLDFQSLYPS++IAYNYC+STCLG+V++
Sbjct: 2046 RLYNSPVVVLDFQSLYPSIMIAYNYCYSTCLGKVQN 2081
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 36/42 (85%)
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++L ISP+ V F DKSIR G+ PK+LQE+LDTR+MVK++MK+
Sbjct: 2175 EHLNISPNNVIFTDKSIRTGLFPKLLQEVLDTRIMVKRAMKK 2216
>gi|363749421|ref|XP_003644928.1| hypothetical protein Ecym_2378 [Eremothecium cymbalariae DBVPG#7215]
gi|356888561|gb|AET38111.1| Hypothetical protein Ecym_2378 [Eremothecium cymbalariae DBVPG#7215]
Length = 1469
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 247/448 (55%), Gaps = 46/448 (10%)
Query: 248 LAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQ 307
L++E+H ++R P+P D VK IF+ + C + L V + I
Sbjct: 635 LSLELHILTRNSKLPNPELDPVKIIFWSMNGCSAQR--------------LSSVSKEGIM 680
Query: 308 MNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVR 367
+ NEK S ++ D + +E+ L F + V
Sbjct: 681 IFMDENEKRFESLILQACGNVDVAVF-------------------ESEELLLQAFSDLVL 721
Query: 368 QWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNS----SRDEVKNTQ 422
DPDIL GYE+ LSWGYLL R + + ++ +SRI R + D V +
Sbjct: 722 IIDPDILSGYEVNKLSWGYLLARANFAYDIPMDIMISRIAAKGPRERINRWNYDRVAGVK 781
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW- 481
+ GR ++N+WR ++ E+N+ Y+FEN ++HVL ER+P +S++ LT +W ++
Sbjct: 782 IM--GRHMLNIWRKMKSELNISKYSFENAVFHVLRERLPQYSYENLTKFWNDKSEQVNIN 839
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
+ + ++ RV+ IRL+E I +T E ARL GI FY V+SRGSQF+VES + R+ +
Sbjct: 840 IVINYWKKRVSYNIRLVEVQQIISKTFEEARLIGIDFYSVMSRGSQFKVESFLARICKSE 899
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
F+ +SPS +A E +PLI+EP+S Y P++VLDFQSLYPSV++AYNYC+ST +
Sbjct: 900 YFILLSPSKSALKKQKALECVPLIMEPQSSFYKSPLLVLDFQSLYPSVMMAYNYCYSTVI 959
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
GRV L ++ G +N+ L + +++TISP+GV F+ ++IR +L KML++IL
Sbjct: 960 GRVRELTNKNN-EIGITKINIPANILHLMDEHITISPNGVLFLRENIRKSVLSKMLKDIL 1018
Query: 662 DTRLMVKQSMKEYKFSESLRNLTMLNSM 689
TR+++K++MK E ++LNS+
Sbjct: 1019 STRILIKETMKALPKEER----SLLNSL 1042
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
M P SS Y P++VLDFQSLYPSV++AYNYC+ST +GRV L
Sbjct: 924 MEPQSS----FYKSPLLVLDFQSLYPSVMMAYNYCYSTVIGRVREL 965
>gi|254569028|ref|XP_002491624.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|238031421|emb|CAY69344.1| Catalytic subunit of DNA polymerase zeta, which is involved in DNA
repair and translesion synthesis [Komagataella pastoris
GS115]
gi|328351871|emb|CCA38270.1| DNA polymerase zeta subunit [Komagataella pastoris CBS 7435]
Length = 1495
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 215/344 (62%), Gaps = 7/344 (2%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEK 410
+ +E E+ F+ V DPDI+ +E + SWGY++ER +V L+L ++ SR+ + +
Sbjct: 723 LGSELEIVQEFVSLVEYIDPDIITAFEPNSSSWGYMIERCKHVYDLDLCEKFSRV-QYKF 781
Query: 411 RNSSRDE---VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N ++D + ++ GR V+NLWR L HE+ L +YT EN++YH+LH RIP +++ +
Sbjct: 782 NNKTKDHWGYTHGSSFRITGRHVLNLWRALTHEITLTNYTLENLVYHILHLRIPHYNYGV 841
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
L+ W+E YK + + ++ RV +++I Q+ + + +E A+L GI FY VLSRGSQ
Sbjct: 842 LSEWFESDKPQYKSLVLNYFTQRVALEMQIITQIQIVSKVTEEAKLIGIDFYSVLSRGSQ 901
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
F+VES+++RL++ N + +SPS K +PLI+EPE+ Y PI+VLDFQSLYP
Sbjct: 902 FKVESLLVRLTKQENLLMISPSKKDVFKQDPLTYVPLIMEPEAAFYKSPIVVLDFQSLYP 961
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
S++IAYNYC++TCLGR++ G + L+ L+ ++T+SP+G+ FV +
Sbjct: 962 SLVIAYNYCYTTCLGRMQGYDAFKEQMIGVTKNKLPAGILEVLKHHITLSPNGLMFVKSN 1021
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
+R ++ KML ++LDTR++VK ++K K R L NS L
Sbjct: 1022 VRRSVIGKMLIDLLDTRILVKSAIK--KLGNDPRILQTYNSRQL 1063
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 31/34 (91%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI+VLDFQSLYPS++IAYNYC++TCLGR++
Sbjct: 946 FYKSPIVVLDFQSLYPSLVIAYNYCYTTCLGRMQ 979
>gi|403217770|emb|CCK72263.1| hypothetical protein KNAG_0J01820 [Kazachstania naganishii CBS 8797]
Length = 1514
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 243/440 (55%), Gaps = 51/440 (11%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFY------YLYTCPPEEDRKVGIILIGQESEL 298
LT +++E+H +R PDP DEV IF+ Y + P E + GI+ +
Sbjct: 679 LTHMSLEVHVNTRGDKNPDPLIDEVVIIFWCIDNETYPFELPLETE---GIMCV------ 729
Query: 299 PEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKEL 358
++ SN+ ++ T IE + L F E ++
Sbjct: 730 ---------IDDFSNKHQM--TKIEQA------------------CHPLTVAFYEKEFDM 760
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEKRNSSRD- 416
F + V +DPDIL G+E+ SWGY+++R + + EL+R ++ ++++ +D
Sbjct: 761 FDALTDLVLLFDPDILSGFEVHMSSWGYIIDRCNKIHKFDFISELARTSQ-QRKSKGKDA 819
Query: 417 --EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEH 474
+T + + GR ++N+WRL+R + L YT ENI YH+LH R+P +S+K LTC W
Sbjct: 820 WGHNHSTDITITGRHMLNIWRLMRSNLTLTQYTIENIAYHLLHYRLPRYSYKSLTCMWNV 879
Query: 475 RTHLYKWMTVEHYL-IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESI 533
+ TV Y RV I ++ + DFI RT+E +RL GI F+ V RGSQ+RVES
Sbjct: 880 NEMVSSLKTVIMYWQTRVRINIEILTKDDFIARTTEFSRLLGIDFHSVYHRGSQYRVESF 939
Query: 534 MLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAY 593
+ R+ NF+ +SPS +A E +PLI+EPES Y P++VLDFQSLYPSV++A
Sbjct: 940 LRRICGSENFLLLSPSKIAVKEQKALECVPLIMEPESAFYKSPLVVLDFQSLYPSVMVAQ 999
Query: 594 NYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
NYC+ST +G+V L + D+ G +++ LK L+ ++ ISP+G+ +V IR +L
Sbjct: 1000 NYCYSTMIGKVGDLNLEDN-KIGVTKVHLEKGVLKILKDDVNISPNGIVYVKPDIRKSML 1058
Query: 654 PKMLQEILDTRLMVKQSMKE 673
KML EILD R+MVK++M +
Sbjct: 1059 AKMLTEILDLRVMVKKTMSQ 1078
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P++VLDFQSLYPSV++A NYC+ST +G+V L + D+
Sbjct: 978 FYKSPLVVLDFQSLYPSVMVAQNYCYSTMIGKVGDLNLEDN 1018
>gi|428182003|gb|EKX50865.1| Rev3 DNA polymerase zeta, partial [Guillardia theta CCMP2712]
Length = 736
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 202/314 (64%), Gaps = 6/314 (1%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEKRNSSRDEVKNT 421
+R DPDIL+G+E++ S GYLLER +G L++ LSR + +E R + + + +
Sbjct: 1 LRDTDPDILVGFEVQHASCGYLLERSAAIGFPLDRCLSRCPFHRSTLESRPDTYGQQQQS 60
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRT--HLY 479
+ + GR ++N+WRL R E+ L Y + N+ VL++R+P +LL W++H H
Sbjct: 61 GIHVCGREILNVWRLCRQEIKLGLYNYTNVCAKVLNKRVPSFPPQLLHSWFQHLASPHSL 120
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
K + + L + + + ++E ++ +GRT E+AR+FGI F+ VLSRGSQ+RVES++ RL+R
Sbjct: 121 KRQVLLYLLEKASNTLLILEAMELVGRTCELARVFGIDFFSVLSRGSQYRVESMLYRLAR 180
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
NF+ +SPS++QR A E +PL++EP+S Y+ P+ VLDF+SLYPSV+IAYN C+ST
Sbjct: 181 TQNFLLLSPSVQQRQSQPATECIPLVMEPQSAFYSSPVCVLDFRSLYPSVVIAYNMCYST 240
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
CLG++ + G L + L +++ I+P+G+AF+ R G+LP++L+E
Sbjct: 241 CLGKLVEPDSDGNVKLGVSSLRRAPGLLASVREEAIITPNGMAFLPPDKREGVLPRLLRE 300
Query: 660 ILDTRLMVKQSMKE 673
IL R+ VK+ MK+
Sbjct: 301 ILQARVAVKKLMKQ 314
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKD 169
Y+ P+ VLDF+SLYPSV+IAYN C+STCLG++ + G + R ++P
Sbjct: 213 FYSSPVCVLDFRSLYPSVVIAYNMCYSTCLGKLVEPDSDGNVKLGVSSLR---RAPGLLA 269
Query: 170 SIHEAEITHPDCSKSSQIDFNPDLFKSFIRK--QLETPKRRICDSYAIDAMTPDTTGDYQ 227
S+ E I P+ D + +R+ Q +++ D T Q
Sbjct: 270 SVREEAIITPNGMAFLPPDKREGVLPRLLREILQARVAVKKLMKQVGGDVKLYRTLNSRQ 329
Query: 228 MGLDNLNEVT 237
GL + VT
Sbjct: 330 FGLKLIANVT 339
>gi|154286642|ref|XP_001544116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407757|gb|EDN03298.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 429
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 224/415 (53%), Gaps = 52/415 (12%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE---EDRKVGI---ILIGQ 294
E Y++V+++E+H +R L P+P DE+ IF+ + E +D GI I+
Sbjct: 45 EAQYMSVMSLEVHVNTRGTLVPNPEEDEISCIFWCVQDGETEINDDDDSAGITAGIIALS 104
Query: 295 ESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSN 354
E+E R P ++ E+
Sbjct: 105 ENESLAARISPTMVSEFEEEQ--------------------------------------T 126
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRIT-----EV 408
E +L + ++ VRQ DPDIL GYE+ SWGYL+ER Y +L ELSR+ +
Sbjct: 127 ELDLLTRLVDVVRQRDPDILTGYEVHNSSWGYLIERARYKYDYDLCDELSRVKTNSHGRI 186
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
K N + +++ GR +IN+WR +R E+NL YT EN+++H+LH+RIP + ++ L
Sbjct: 187 GKGNDRWGFNHTSSIRITGRHMINIWRAMRGELNLLQYTMENVVFHLLHQRIPHYPFQDL 246
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
T W+ + + ++L R+ +++IE + I RTSE AR+ GI F+ V SRGSQF
Sbjct: 247 TKWFTSKRPRDIAKVINYFLSRIQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQF 306
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+VES+M R+++ NF+ +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS
Sbjct: 307 KVESLMFRIAKPENFILISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPS 366
Query: 589 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
++IAYNYC+STCLGRV + G ID L+ + + I+P+G+ +
Sbjct: 367 IMIAYNYCYSTCLGRV--VSWRGQNKLGFIDFRRPAGLLELFKDQINIAPNGIIY 419
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES + R KP++ SP +K +++ + M P S YT P++VLDFQSLY
Sbjct: 309 ESLMFRIAKPENFILISPGKKQVGQQNALECLPLVMEPQSD----FYTSPLLVLDFQSLY 364
Query: 125 PSVIIAYNYCFSTCLGRV 142
PS++IAYNYC+STCLGRV
Sbjct: 365 PSIMIAYNYCYSTCLGRV 382
>gi|320581055|gb|EFW95277.1| Catalytic subunit of DNA polymerase zeta [Ogataea parapolymorpha
DL-1]
Length = 1564
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 245/442 (55%), Gaps = 43/442 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
L VL +E+H +R L PDP DE++ +F+ +D+ I L + S +
Sbjct: 741 LIVLNMELHVNTRGDLFPDPLEDEIRMLFWSF------DDQNYPIDLGIEGSGV------ 788
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
FV N E+ I + ++TF R V +EL S+ +E
Sbjct: 789 -----FVVNSHEITRKHI------------NFPVQTF-------RSEVDMVRELISL-VE 823
Query: 365 NVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT--EVEKRNSSRDEVKNT 421
V DPDIL GYEI + SWGYLLER V ++L LSR+ ++ K N +
Sbjct: 824 FV---DPDILSGYEIHSASWGYLLERFRKVHKMDLGVRLSRVATKQLNKVNDRWGFTHAS 880
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
+++ GR ++NLWR LR E+++ Y+ EN+++H LH +IP + K LT W+ +
Sbjct: 881 GIKITGRHMLNLWRPLRKELSINRYSLENVVWHTLHIKIPHYEHKTLTQWFLSNSPGNLN 940
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
VE+Y+ R+ ++LI +++ I RT E +R GI +Y V RGSQF+VES+++RL++
Sbjct: 941 NLVEYYMSRLHWQMKLINKMEIIERTVEESRFLGIDYYSVFYRGSQFKVESLLVRLAKAE 1000
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
NF+ +SPS KQ + +PLILEPES Y P++VLDFQSLYPS++IA+N C+ST L
Sbjct: 1001 NFILISPSKKQVFKQDPLQVIPLILEPESSFYKSPLLVLDFQSLYPSLVIAHNLCYSTLL 1060
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
GR+ + G + LK ++++T++P+G+ F+ ++R +L KML EIL
Sbjct: 1061 GRLHGYDPKKTQTLGITSWKLPPGLLKLFEKHITVTPNGLMFLKPNVRKSVLAKMLSEIL 1120
Query: 662 DTRLMVKQSMKEYKFSESLRNL 683
D R++VK +M K L L
Sbjct: 1121 DARILVKDTMNGLKDDSELYKL 1142
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKD 169
Y P++VLDFQSLYPS++IA+N C+ST LGR+ + G S + PP
Sbjct: 1031 FYKSPLLVLDFQSLYPSLVIAHNLCYSTLLGRLHGYDPKKTQTLGIT----SWKLPPGLL 1086
Query: 170 SIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQL 202
+ E IT + + + P++ KS + K L
Sbjct: 1087 KLFEKHIT---VTPNGLMFLKPNVRKSVLAKML 1116
>gi|256274231|gb|EEU09139.1| Rev3p [Saccharomyces cerevisiae JAY291]
Length = 1504
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 245/436 (56%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + ++++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINLTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P+IVLDFQSLYPS++I YNYC+ST +GRV + ++++
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINLTEN 1006
>gi|6325090|ref|NP_015158.1| Rev3p [Saccharomyces cerevisiae S288c]
gi|118901|sp|P14284.1|DPOZ_YEAST RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|172387|gb|AAA34968.1| DNA polymerase (pot.); putative [Saccharomyces cerevisiae]
gi|1370353|emb|CAA97873.1| REV3 [Saccharomyces cerevisiae]
gi|1403542|emb|CAA65554.1| P2535 protein [Saccharomyces cerevisiae]
gi|285815375|tpg|DAA11267.1| TPA: Rev3p [Saccharomyces cerevisiae S288c]
gi|392295841|gb|EIW06944.1| Rev3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1504
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 245/436 (56%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + ++++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINLTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P+IVLDFQSLYPS++I YNYC+ST +GRV + ++++
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINLTEN 1006
>gi|151942632|gb|EDN60978.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae YJM789]
Length = 1504
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 245/436 (56%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + ++++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINLTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P+IVLDFQSLYPS++I YNYC+ST +GRV + ++++
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINLTEN 1006
>gi|349581651|dbj|GAA26808.1| K7_Rev3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1504
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 245/436 (56%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + ++++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINLTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P+IVLDFQSLYPS++I YNYC+ST +GRV + ++++
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINLTEN 1006
>gi|190407794|gb|EDV11059.1| DNA polymerase zeta subunit [Saccharomyces cerevisiae RM11-1a]
Length = 1504
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 244/436 (55%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + +++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINSTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 8/56 (14%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-------EHLGVSD-SFPFGCIA 157
Y P+IVLDFQSLYPS++I YNYC+ST +GRV +LGVS S P +A
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINSTENNLGVSKFSLPRNILA 1021
>gi|401623294|gb|EJS41398.1| rev3p [Saccharomyces arboricola H-6]
Length = 1502
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 237/435 (54%), Gaps = 41/435 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKVGIILIGQESELPEVR 302
LT L +EI +R PDP DEV I + L T P + D I+I
Sbjct: 668 LTHLTLEIQVNTRGDKVPDPIVDEVSMILWCLEEETFPLDLDIAYEGIMI---------- 717
Query: 303 TKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
+ +F N +F ++Q DI + F E ++F
Sbjct: 718 ---VHKDFKDN------SFPTQIQQCVGDIPV---------------MFYETESDMFEAL 753
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEKRNSSR--DEVK 419
+ V +DPDIL G+EI SWGY++ER V ++ +EL+R+ K +S
Sbjct: 754 TDLVLLFDPDILSGFEIHNSSWGYIIERCQKVHQFDIIKELARVKYPSKSKTSDTWGYAH 813
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLY 479
++ + + GR +IN+WR LR +VNL YT E++ Y++LH R+P S+K LT W +
Sbjct: 814 SSGISVTGRHIINIWRALRSDVNLTQYTVESLAYNLLHRRLPHFSYKSLTNMWNGKNGST 873
Query: 480 KWMTV-EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
K TV ++L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 874 KLKTVVSYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRIC 933
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ +F+ +SP K +A E +PL++EPES Y P++VLDFQSLYPS++I YNYC+S
Sbjct: 934 KSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLVVLDFQSLYPSIMIGYNYCYS 993
Query: 599 TCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
T +GRV + + D+ G ++ L ++ ++TI+P+GV + S+R L KML
Sbjct: 994 TMIGRVREIRLVDN-ELGVAKFSLPRNILTLVKDDVTIAPNGVIYAKTSLRKSTLSKMLT 1052
Query: 659 EILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1053 DILDIRVMIKKTMNE 1067
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P++VLDFQSLYPS++I YNYC+ST +GRV + + D+
Sbjct: 967 FYKSPLVVLDFQSLYPSIMIGYNYCYSTMIGRVREIRLVDN 1007
>gi|259149989|emb|CAY86792.1| Rev3p [Saccharomyces cerevisiae EC1118]
Length = 1504
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 244/436 (55%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + +++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINSTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 8/56 (14%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-------EHLGVSD-SFPFGCIA 157
Y P+IVLDFQSLYPS++I YNYC+ST +GRV +LGVS S P +A
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINSTENNLGVSKFSLPRNILA 1021
>gi|365762744|gb|EHN04277.1| Rev3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1504
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 244/436 (55%), Gaps = 43/436 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESELPEV 301
LT L +EIHA +R+ PDPA DEV I + L T P + D GI+++ + SE
Sbjct: 667 LTHLTLEIHANTRSDKIPDPAIDEVSMIIWCLEEETFPLDLDIAYEGIMIVHKASE---D 723
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
T P ++ NE + F +E E+F
Sbjct: 724 STFPTKIQHCINEIPVM--------------------------------FYESEFEMFEA 751
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT-EVE-KRNSSRDEV 418
+ V DPDIL G+EI SWGY++ER + ++ +EL+R+ +++ K + +
Sbjct: 752 LTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKCQIKTKLSDTWGYA 811
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
++ + + GR +IN+WR LR +VNL YT E+ +++LH+R+P S++ LT W +
Sbjct: 812 HSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKRLPHFSFESLTNMWNAKKST 871
Query: 479 YKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
+ TV +Y L R I+L+ + D+I R E ARL GI F+ V RGSQF+VES ++R+
Sbjct: 872 TELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGIDFHSVYYRGSQFKVESFLIRI 931
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ +F+ +SP K +A E +PL++EPES Y P+IVLDFQSLYPS++I YNYC+
Sbjct: 932 CKSESFILLSPGKKDVRKQKALECVPLVMEPESAFYKSPLIVLDFQSLYPSIMIGYNYCY 991
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST +GRV + +++ G ++ L L+ ++TI+P+GV + S+R L KML
Sbjct: 992 STMIGRVREINSTEN-NLGVSKFSLPRNILALLKNDVTIAPNGVVYAKTSVRKSTLSKML 1050
Query: 658 QEILDTRLMVKQSMKE 673
+ILD R+M+K++M E
Sbjct: 1051 TDILDVRVMIKKTMNE 1066
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 8/56 (14%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-------EHLGVSD-SFPFGCIA 157
Y P+IVLDFQSLYPS++I YNYC+ST +GRV +LGVS S P +A
Sbjct: 966 FYKSPLIVLDFQSLYPSIMIGYNYCYSTMIGRVREINSTENNLGVSKFSLPRNILA 1021
>gi|357511975|ref|XP_003626276.1| DNA polymerase [Medicago truncatula]
gi|355501291|gb|AES82494.1| DNA polymerase [Medicago truncatula]
Length = 1037
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 253/506 (50%), Gaps = 113/506 (22%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAI-FYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
L +L++E+ A SR L PDP +D V + + C D V ++++
Sbjct: 138 LALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDC----DATVEVLVL----------- 182
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+ FV ++ L D L ++ F+ +EK L F
Sbjct: 183 --LHSKFVPCQRSL-------------DGLSDCKVLNFT-----------DEKHLLKEFT 216
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR-----------ITEVEK-- 410
+ V DPDIL+G+EI+ S G+L ER LG L +LSR I EK
Sbjct: 217 KIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSI 276
Query: 411 ---------------RNSS--RDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFEN 450
R SS DE T + + GRIV+NLWRL+R EV L Y+ E
Sbjct: 277 LEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEA 336
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
+ VL ++P + +LT W+ ++ +++ + R + ++ QLD + RTSE+
Sbjct: 337 VAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSEL 396
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK------------------- 551
AR+FGI F+ VLSRGSQ+RVES+ LRL+ N+VA+SP +
Sbjct: 397 ARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVLSKFSHPPLLLSVENYN 456
Query: 552 ------QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV- 604
Q A A E LPL++EPES Y+DP++VLDFQSLYPS+IIAYN CF TCLG+V
Sbjct: 457 VCYPSYQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV 516
Query: 605 ----EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGVS P I L+ L+ + ++P+GV FV IR G+LP++L+EI
Sbjct: 517 PSKTNTLGVSPFVPEQHI--------LQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEI 568
Query: 661 LDTRLMVKQSMKEYKFSESLRNLTML 686
L TR+MVKQ+MK+ SE + +L
Sbjct: 569 LSTRIMVKQAMKKLSPSEQVLQRVLL 594
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 5/48 (10%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVSDSFP 152
Y+DP++VLDFQSLYPS+IIAYN CF TCLG+V LGVS P
Sbjct: 483 FYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKTNTLGVSPFVP 530
>gi|367009362|ref|XP_003679182.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
gi|359746839|emb|CCE89971.1| hypothetical protein TDEL_0A06390 [Torulaspora delbrueckii]
Length = 1486
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/488 (33%), Positives = 257/488 (52%), Gaps = 52/488 (10%)
Query: 191 PDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAV 250
P K+ + QLE P + D M D Q N+ +S LT +
Sbjct: 610 PRKTKNRFKSQLENPISK-------DEMLYKGNTDQQAKSKNIKVHSS------LTHFTL 656
Query: 251 EIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNF 310
EIH + PDP DEV IF++L ++S + P+ +
Sbjct: 657 EIHVQTEGAKLPDPQKDEVSIIFWHL----------------ERDSYPFDFHVSPMGI-M 699
Query: 311 VSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWD 370
V ++ F + +++ I + F +E +LF ++ V +D
Sbjct: 700 VLKSPDVDDNFTDRIQRAAGKIPVA---------------FYDDEFDLFDALVDIVLIFD 744
Query: 371 PDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEKRNSSRDE---VKNTQLQMP 426
PD+L G+E+ + SWGY++ER + E+SR+ K RD+ + + +
Sbjct: 745 PDLLSGFEVHSSSWGYIIERCRQAHRFEIADEISRVNSSVK-TKLRDQWGYSHASSIVIS 803
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEH 486
GR +IN+WR ++ ++ L YT ENI Y +R+P S++ L+ W + +L TV
Sbjct: 804 GRHMINVWRAVKDDLALTKYTIENIAYVAFRQRLPHFSFQSLSEMWRNNHNLSSAKTVLS 863
Query: 487 YLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVA 545
Y + RV IRL+++ ++I R +E++RL GI FY V RGSQ+++ESI+ RL + +F+
Sbjct: 864 YWVDRVELNIRLLQKQEYIPRVTELSRLTGIDFYSVYYRGSQYKIESILGRLCKAESFIM 923
Query: 546 VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 605
V+PS ++ A E +PL++EPES Y P++VLDFQSLYPS+++AYNYC+ST LGRV
Sbjct: 924 VAPSKRRVKQQNALECVPLVMEPESAFYKSPLVVLDFQSLYPSIMMAYNYCYSTMLGRVP 983
Query: 606 HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
L V ++ G + + L L N+TISP+G+A+V +IR L KML++ILDTR
Sbjct: 984 ELKVGENI-IGASQVILPEGLLTLLADNVTISPNGIAYVKSTIRKSTLAKMLEDILDTRF 1042
Query: 666 MVKQSMKE 673
MVK++M +
Sbjct: 1043 MVKKTMTD 1050
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y P++VLDFQSLYPS+++AYNYC+ST LGRV L V ++
Sbjct: 950 FYKSPLVVLDFQSLYPSIMMAYNYCYSTMLGRVPELKVGEN 990
>gi|365991463|ref|XP_003672560.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
gi|343771336|emb|CCD27317.1| hypothetical protein NDAI_0K01260 [Naumovozyma dairenensis CBS 421]
Length = 1499
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 241/433 (55%), Gaps = 37/433 (8%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
LT L++E H +R +PDP DEV I + C +E +
Sbjct: 663 LTHLSLETHINTRGDKRPDPKKDEVTMITW----CIEDE-------------------SF 699
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
P +N E E + ++ D L + E + + F E ++F +
Sbjct: 700 PFDLNM---ETEGIMVVLTDL----TDTLKQRKFEQAARNTSVA--FYETEFDMFEALTD 750
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVL-GLNLNQELSRITEVEKRNSSR--DEVKNT 421
+ DPDI+ G+E+ SWGY++ER ++ ++ +E+SR+ K+ S ++
Sbjct: 751 LILLCDPDIISGFEVHMSSWGYIIERCNIIHKFDILEEISRVHSRWKKKSKDIWGYTHSS 810
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
+ + GR VIN+WR LR E+NL YT ENI Y+VL ER+P S++ LT W +
Sbjct: 811 GISVTGRHVINIWRALRSEMNLTQYTIENITYNVLRERLPHFSYQSLTDMWNDNCSISNL 870
Query: 482 MTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
TV +Y L+R I+L+++ +FI +T E ARL GI F V RGSQ++VES ++R+ +
Sbjct: 871 KTVINYWLLRTRLNIKLLQKQEFIPKTIEQARLIGIDFNSVSYRGSQYKVESFLIRICKS 930
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
+F+ ++P KQ +A E +PL++EPES Y P++VLDFQSLYPS+I AYNYC+ST
Sbjct: 931 ESFLLLAPGKKQVRKQKALECVPLVMEPESSFYKSPLVVLDFQSLYPSIITAYNYCYSTM 990
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
LGRV L + G ++N+ L+ L+ ++TI+P+G+ ++ S+R L KML EI
Sbjct: 991 LGRVRELKTFGN-EIGVTNINIEKNLLRLLENDVTIAPNGMVYLKPSVRKSTLAKMLTEI 1049
Query: 661 LDTRLMVKQSMKE 673
LD R+MVK++M +
Sbjct: 1050 LDIRVMVKKTMSD 1062
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
M P SS Y P++VLDFQSLYPS+I AYNYC+ST LGRV L
Sbjct: 956 MEPESS----FYKSPLVVLDFQSLYPSIITAYNYCYSTMLGRVREL 997
>gi|302848187|ref|XP_002955626.1| hypothetical protein VOLCADRAFT_66026 [Volvox carteri f.
nagariensis]
gi|300259035|gb|EFJ43266.1| hypothetical protein VOLCADRAFT_66026 [Volvox carteri f.
nagariensis]
Length = 732
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 193/314 (61%), Gaps = 13/314 (4%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLN--LNQELSRI--------TEVEKRNSSRDEVK 419
DPD+L+G++++ S GYL ERG LGL L + R +V ++ R E
Sbjct: 17 DPDMLLGWDVQRHSLGYLAERGAALGLTPPLLRSAGRTPGAASIKEKQVGEKGEERGETG 76
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLY 479
+ + GRI++NLWR+LR E+ L SY+FE+ VL R+P + L W+
Sbjct: 77 GSGFYVTGRILLNLWRVLRGELKLGSYSFESCTAAVLGLRVPRVREQELAAWFAAGPPGG 136
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
+W + L R + + EQLD IGRT+E+AR FGI F+ VLSRGSQ+RVES+++RL+
Sbjct: 137 RWRCLHWLLRRCRLDLAMCEQLDLIGRTAELARTFGIDFFSVLSRGSQYRVESLLVRLAH 196
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
NNF+ SPS +Q A E LPL++EPESR+YT P++VLDFQSLYPS IIAYN C+ST
Sbjct: 197 TNNFIMTSPSREQVGGQPAMECLPLVMEPESRMYTCPVVVLDFQSLYPSQIIAYNMCYST 256
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
C+GR +H C+ V R + + P+G+A+V +R G+LP+ML E
Sbjct: 257 CVGRPQH--ARAGMHRSCLH-RVVHRVVHQRPPFPWRHPNGIAYVPPKVRPGVLPRMLSE 313
Query: 660 ILDTRLMVKQSMKE 673
IL+TR+M+K +MK+
Sbjct: 314 ILNTRVMIKGAMKK 327
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 108 DRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
R+YT P++VLDFQSLYPS IIAYN C+STC+GR +H
Sbjct: 227 SRMYTCPVVVLDFQSLYPSQIIAYNMCYSTCVGRPQH 263
>gi|296423830|ref|XP_002841455.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637695|emb|CAZ85646.1| unnamed protein product [Tuber melanosporum]
Length = 1622
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 251/454 (55%), Gaps = 63/454 (13%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
+++++++E+H + P+ D+++ IF+ L EE G++ E+ EV T
Sbjct: 800 HMSIMSLELHINTVGDFVPNAERDQIECIFWSLKEM--EE---------GEDGEVKEV-T 847
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+ + V + ++ RQ +I ET G + + I
Sbjct: 848 RIGIITLVDEHNNDPNPGLKFRRQCRAEI----RTETSELG-------------MINTLI 890
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVL-GLNLNQELSRIT-EVEKRNSSRDEV--- 418
+ VR DPDIL G+E+ + SWGYL++R L +NL +LSR+ E R +
Sbjct: 891 DTVRVLDPDILTGWEVNSSSWGYLIKRANQLFEMNLCDDLSRVKIETHSRFGKESNLWGF 950
Query: 419 -KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+ +++ GR ++N+WR + E+NL Y+ EN+++H+LH+RIP +S+++LT W+ +
Sbjct: 951 NTGSAIRITGRHMVNIWRAMTAELNLLGYSMENVVFHLLHQRIPHYSFRVLTGWYTSGSP 1010
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
L ++H + +V + ++++ + I RTSE ARL GI F V RGSQF+VES+M R+
Sbjct: 1011 LLFGKVIKHLVRKVQLDLEILDRQELITRTSEQARLLGIDFASVSGRGSQFKVESMMFRI 1070
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
++ +F+ VSPS Q A E LPL++EP SR YT P++VLDFQSLYPSV+IA+NYC+
Sbjct: 1071 AKPESFILVSPSKAQVGQQNALECLPLVMEPFSRFYTSPVVVLDFQSLYPSVMIAHNYCY 1130
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST L E +++ I+P+G+ ++ ++IR +L KML
Sbjct: 1131 STFLELCE--------------------------KDINIAPNGMMYIKQTIRKSLLAKML 1164
Query: 658 QEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
EILDTR+MVK MK K ++L+ L LNS L
Sbjct: 1165 TEILDTRVMVKNGMKRDKHDKALQKL--LNSRQL 1196
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R YT P++VLDFQSLYPSV+IA+NYC+ST L
Sbjct: 1104 RFYTSPVVVLDFQSLYPSVMIAHNYCYSTFL 1134
>gi|374105641|gb|AEY94552.1| FAAL099Cp [Ashbya gossypii FDAG1]
Length = 1464
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 240/430 (55%), Gaps = 38/430 (8%)
Query: 248 LAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQ 307
L++EIH +R + P+P DE+K I + + + + VG + E+ T +
Sbjct: 630 LSMEIHVDTRRNMLPNPRTDEIKMICWSI-----DGPQSVGTM---------ELSTDGLL 675
Query: 308 MNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVR 367
++ N+ ++ IE G F ++E EL + F + V
Sbjct: 676 VSLNENDA-IYKRIIEEA--------CGKT----------RVAFFTSEYELITEFAKLVL 716
Query: 368 QWDPDILIGYEIETLSWGYLLERGYVL-GLNLNQELSRITEVEKRN--SSRDEVKNTQLQ 424
DPDIL GYE SWGY+L R + ++ +SR++ ++ S + + ++
Sbjct: 717 IIDPDILSGYETNKSSWGYILARAELSHNIDFGLLISRLSRDDRSGLASEWNYSHSAGIK 776
Query: 425 MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTV 484
+ GR ++N+WR +R EVNL Y EN+ YH+LHER+P + + L+ +W ++ V
Sbjct: 777 IAGRHMLNVWRKMRTEVNLAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTSIKIV 836
Query: 485 EHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+Y L RV IRL+ I RT E ARL GI FY VLSRGSQ+RVES++ RL++ +
Sbjct: 837 INYCLERVRCNIRLLNLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAKAEHL 896
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+ +SP H RA E +PLILEP+ YT P++VLDFQSLYPS+IIAYNYC++T LGR
Sbjct: 897 MLISPGKGDLRHQRALECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTTILGR 956
Query: 604 VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDT 663
+ ++ G + L+ L N+TI+P+GV +V ++IR IL KML +ILDT
Sbjct: 957 TREMTAGEN-KIGITTNILKPNILQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDILDT 1015
Query: 664 RLMVKQSMKE 673
R+++K+++ +
Sbjct: 1016 RVLLKRTISD 1025
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
YT P++VLDFQSLYPS+IIAYNYC++T LGR + ++
Sbjct: 925 FYTSPVLVLDFQSLYPSIIIAYNYCYTTILGRTREMTAGEN 965
>gi|302306271|ref|NP_982443.2| AAL099Cp [Ashbya gossypii ATCC 10895]
gi|299788440|gb|AAS50267.2| AAL099Cp [Ashbya gossypii ATCC 10895]
Length = 1464
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 240/430 (55%), Gaps = 38/430 (8%)
Query: 248 LAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQ 307
L++EIH +R + P+P DE+K I + + + + VG + E+ T +
Sbjct: 630 LSMEIHVDTRRNMLPNPRTDEIKMICWSI-----DGPQSVGTM---------ELSTDGLL 675
Query: 308 MNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVR 367
++ N+ ++ IE G F ++E EL + F + V
Sbjct: 676 VSLNENDA-IYKRIIEEA--------CGKT----------RVAFFTSEYELITEFAKLVL 716
Query: 368 QWDPDILIGYEIETLSWGYLLERGYVL-GLNLNQELSRITEVEKRN--SSRDEVKNTQLQ 424
DPDIL GYE SWGY+L R + ++ +SR++ ++ S + + ++
Sbjct: 717 IIDPDILSGYETNKSSWGYILARAELSHNIDFGLLISRLSRDDRSGLASEWNYSHSAGIK 776
Query: 425 MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTV 484
+ GR ++N+WR +R EVNL Y EN+ YH+LHER+P + + L+ +W ++ V
Sbjct: 777 IAGRHMLNVWRKMRTEVNLAKYNIENVAYHLLHERLPKFTHETLSGFWRTKSDRTSIKIV 836
Query: 485 EHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+Y L RV IRL+ I RT E ARL GI FY VLSRGSQ+RVES++ RL++ +
Sbjct: 837 INYCLERVRCNIRLLNLKQVISRTVEQARLIGIDFYSVLSRGSQYRVESVLARLAKAEHL 896
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+ +SP H RA E +PLILEP+ YT P++VLDFQSLYPS+IIAYNYC++T LGR
Sbjct: 897 MLISPGKGDLRHQRALECVPLILEPDPTFYTSPVLVLDFQSLYPSIIIAYNYCYTTILGR 956
Query: 604 VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDT 663
+ ++ G + L+ L N+TI+P+GV +V ++IR IL KML +ILDT
Sbjct: 957 TREMTAGEN-KIGITTNILKPNILQLLGDNITIAPNGVTYVKQNIRKSILAKMLSDILDT 1015
Query: 664 RLMVKQSMKE 673
R+++K+++ +
Sbjct: 1016 RVLLKRTISD 1025
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
YT P++VLDFQSLYPS+IIAYNYC++T LGR + ++
Sbjct: 925 FYTSPVLVLDFQSLYPSIIIAYNYCYTTILGRTREMTAGEN 965
>gi|213401351|ref|XP_002171448.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|211999495|gb|EEB05155.1| DNA polymerase zeta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1464
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 205/329 (62%), Gaps = 8/329 (2%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVE 409
V E EL + I R DP +L GYEI+ SWGY++ER + +L ELSR+ + E
Sbjct: 700 LVDTEIELINEVISVTRDIDPTLLCGYEIQQSSWGYVIERAMMQFQYDLTSELSRLKQFE 759
Query: 410 K-RNSSRDEV----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ S+D+ K T L + GR ++N+WRL++ E NL +Y+ E+++ HV + P +S
Sbjct: 760 SGKFGSKDDPWGHRKATSLHVVGRHLLNIWRLMKGEYNLFNYSLESVVSHVFDTQTPHYS 819
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
L W K V+++L RV+ +R++ I + E AR+ G+ FY V+SR
Sbjct: 820 QNDLNTLWASSQLRDKLHFVQYHLSRVSYDLRILVSSAVITKVREQARIIGVDFYSVISR 879
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQF+VESI+ R+++ N++ SP +Q A E LPL+LEP++ L+ +P+ VLDFQS
Sbjct: 880 GSQFKVESILFRIAKSENYILPSPGPQQMTEQNALECLPLVLEPQTNLFKNPVAVLDFQS 939
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N CFSTCLG V ++ + F + ++ L+ L+ ++ ISP+GVA+V
Sbjct: 940 LYPSIIIAFNLCFSTCLGYVRNIDKAQRLGFTFYQADPTL--LQALKDDIYISPNGVAYV 997
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K++R +L +ML+E++DTRL++K MK+
Sbjct: 998 QKNVRKSLLARMLEELIDTRLLLKSGMKD 1026
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
L+ +P+ VLDFQSLYPS+IIA+N CFSTCLG V ++ + F
Sbjct: 927 LFKNPVAVLDFQSLYPSIIIAFNLCFSTCLGYVRNIDKAQRLGF 970
>gi|254583932|ref|XP_002497534.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
gi|238940427|emb|CAR28601.1| ZYRO0F07766p [Zygosaccharomyces rouxii]
Length = 1482
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 238/437 (54%), Gaps = 46/437 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEED-RKVGIILIGQESELPEV 301
LT ++EIH + KPDP +EVK + + L + P + D GI+ + ++ P +
Sbjct: 649 LTHFSMEIHVETEGSKKPDPVRNEVKMVVWCLEKESFPFDLDISHEGILAVVDQTAEPHL 708
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
++ Q D+ + F E ++F
Sbjct: 709 --------------------ANHIVQGAGDVPVA---------------FYKTEMDMFDA 733
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRDE--- 417
+ V +D DIL G+EI SWGY++ER G+ ++++ SR+ +N +RD
Sbjct: 734 LTDLVLFFDTDILSGFEIHDGSWGYIIERCRKHYGIEISEDFSRVNS-NLKNKARDRWGF 792
Query: 418 VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTH 477
+ + + GR +IN+WR +R E+NL Y+ EN+ + +L ERIP S++ LT W +R H
Sbjct: 793 THASGIMIAGRHMINVWRSMRSELNLTQYSLENLAFELLDERIPRFSFQALTQLWRNRQH 852
Query: 478 LYKWMTVEHY-LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
TV +Y + RV IRL+++ D+I R E ARL GI FY V RGSQ++VESI+ R
Sbjct: 853 PSNVKTVINYWMTRVRMNIRLLQKQDYIARIVEQARLTGIDFYSVYYRGSQYKVESILFR 912
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
L + +F+++SPS KQ + RA E +PL++EPES Y P++VLDFQSLYPS++IAYN C
Sbjct: 913 LCKQEDFLSLSPSRKQVKNQRALECVPLVMEPESAFYKSPVVVLDFQSLYPSIMIAYNLC 972
Query: 597 FSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
+ST +GRV L + G + L+++ I+ +G+ +V S R L +M
Sbjct: 973 YSTMVGRVRDLDFKNE--LGVTKFPFPKNAFNTLEEHTRITANGIVYVKSSYRNSTLARM 1030
Query: 657 LQEILDTRLMVKQSMKE 673
L+++L TR +VK++M +
Sbjct: 1031 LEDLLYTRRLVKKTMSD 1047
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 14/79 (17%)
Query: 84 SPTRKNKSTRSSFDSD---MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
SP+RK + + + M P S+ Y P++VLDFQSLYPS++IAYN C+ST +G
Sbjct: 923 SPSRKQVKNQRALECVPLVMEPESA----FYKSPVVVLDFQSLYPSIMIAYNLCYSTMVG 978
Query: 141 RV------EHLGVSDSFPF 153
RV LGV+ FPF
Sbjct: 979 RVRDLDFKNELGVT-KFPF 996
>gi|156846635|ref|XP_001646204.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156116878|gb|EDO18346.1| hypothetical protein Kpol_1013p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 1503
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 272/546 (49%), Gaps = 92/546 (16%)
Query: 165 PPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIR-KQLETPKRRICDSYAIDAMTPDTT 223
PP+ +++ + P SQID N + +S+++ K PK R + +
Sbjct: 613 PPSYNNVKTGSLKSPKKCFDSQIDKNYSINRSYLKSKNPVIPKVRKLKIHDV-------- 664
Query: 224 GDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEE 283
LT +E+H + PDP D V+ I + +
Sbjct: 665 ---------------------LTHFTLEVHTDNIGSKFPDPKNDSVRLIAWKI------- 696
Query: 284 DRKVGIILIGQESELPEVRTKPIQMNFVSN--------EKELFSTFIENVRQWDPDILIG 335
+ T P Q++ S E E+ + ++ + Q IG
Sbjct: 697 ----------------DDETYPFQLDVASEGFMIFCGPETEVSNYHLKRIEQAAGSSAIG 740
Query: 336 YEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVL 394
F E ++F I+ + +DPDIL G+E+++ SWGYL++R ++
Sbjct: 741 ---------------FYETEIDMFDALIDLILFFDPDILSGFEVQSASWGYLIDRYRFIQ 785
Query: 395 GLNLNQELSRIT--EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIM 452
+L +ELSR++ E + +++ +++ GR +IN+WR +R N YT EN+
Sbjct: 786 KESLLEELSRVSIDEASRYIDKWGSNRSSGVKVTGRHIINIWRAMRASTNFNQYTIENLC 845
Query: 453 YHVLHERIPLHSWKLLTCWW------EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
+L++R+P S+ L+ W E +T + WMT RV + L+++ ++I R
Sbjct: 846 SKLLNKRLPHFSFSDLSKMWNGNDVTEIKTVMSYWMT------RVRCNMLLLKKQEYITR 899
Query: 507 TSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLIL 566
+E +RL GI FY V RGSQ+ VES ++RL + F+ VSPS ++ R+ E +PLI+
Sbjct: 900 VTEQSRLIGIDFYSVYYRGSQYNVESFLIRLCKSEEFLLVSPSKEKVRDQRSLECVPLIM 959
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
EPES Y P++VLDFQSLYPS++IAYNYC+ST LGRVE L + + G L++
Sbjct: 960 EPESAFYKSPLLVLDFQSLYPSIMIAYNYCYSTMLGRVEDLKPNGN-QIGATTLSIPNNL 1018
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTML 686
LK L+ ++ ISP+GV F+ ++R IL KML +IL TR+MVK +M E + S N M
Sbjct: 1019 LKLLKDDIQISPNGVVFLKSTVRKSILSKMLTDILKTRVMVKNTMSELQNVSSDLNKIMN 1078
Query: 687 NSMLLI 692
N L +
Sbjct: 1079 NRQLAL 1084
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKD 169
Y P++VLDFQSLYPS++IAYNYC+ST LGRVE L PN +
Sbjct: 965 FYKSPLLVLDFQSLYPSIMIAYNYCYSTMLGRVEDL-------------------KPNGN 1005
Query: 170 SIHEAEITHPD-----CSKSSQIDFNPDLF-KSFIRKQLETPKRRICDSYAIDAMTPDTT 223
I ++ P+ QI N +F KS +RK + + + + D M +T
Sbjct: 1006 QIGATTLSIPNNLLKLLKDDIQISPNGVVFLKSTVRKSILS--KMLTDILKTRVMVKNTM 1063
Query: 224 GDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRA 258
+ Q +LN++ ++ + L +LA + S A
Sbjct: 1064 SELQNVSSDLNKIMNNRQ-LALKLLANVTYGYSSA 1097
>gi|390604346|gb|EIN13737.1| hypothetical protein PUNSTDRAFT_117429 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1767
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 246/450 (54%), Gaps = 63/450 (14%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAI---FYYLYTCPPEEDR--KVGIILIGQESELP 299
LTVL++E+ A SR L P+P D + A+ F P+E + G+I++ +
Sbjct: 923 LTVLSLEVFAPSRGDLLPEPETDGIAAVAWAFQDTINAQPDEGFSCRRGLIVLASD---- 978
Query: 300 EVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELF 359
PIQ D L + +E +E +L
Sbjct: 979 -----PIQQ----------------------DRLRDHPVEV-----------AQDELDLI 1000
Query: 360 SIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEKRNSSRDEV 418
+ I+ V DPDI+ GYE+++ SWGYL R GL++ +++SR +R+
Sbjct: 1001 NRTIDLVLGMDPDIVAGYEVQSSSWGYLSCRADSAFGLDIGEQISRAPP-----GTRNPG 1055
Query: 419 KNTQ--------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
N Q ++ GR V N+WRL+R E L +Y+FEN+++ VLH+R P + LT
Sbjct: 1056 GNLQWSIRTTASFEVVGRHVFNIWRLMRSEQTLLNYSFENLVFTVLHKRTPKYRNSTLTE 1115
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
W+ + + + R ++L++ + + +T+E AR+ G++FY V+SRGSQ++V
Sbjct: 1116 WYRSAVPGHNSRLLRYLSDRAALNLQLLDATEVVTKTAEFARVHGVEFYSVISRGSQYKV 1175
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
ES + R+++ ++V +SPS + A E++PL++EP S YT P++VLDFQSLYPSV+
Sbjct: 1176 ESFVSRIAKPESYVMLSPSKEDVGRQNAAEAMPLVMEPLSSFYTSPVLVLDFQSLYPSVM 1235
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
IAYN+ + TCLGR + FG DL + L++L+ ++ ++P+G+ +V + +R
Sbjct: 1236 IAYNFSYDTCLGR--SVPFKGQNKFGVTDLQLPPGLLERLKDDVNVAPNGMIYVKQHVRK 1293
Query: 651 GILPKMLQEILDTRLMVKQSMKEYKFSESL 680
G+L +ML E+L+TR+MVKQ+MK K ++L
Sbjct: 1294 GLLGRMLAELLNTRVMVKQAMKGVKSDKAL 1323
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
YT P++VLDFQSLYPSV+IAYN+ + TCLGR
Sbjct: 1217 FYTSPVLVLDFQSLYPSVMIAYNFSYDTCLGR 1248
>gi|353237439|emb|CCA69412.1| probable catalytic subunit of DNA polymerase zeta UPR-1
[Piriformospora indica DSM 11827]
Length = 1531
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 194/327 (59%), Gaps = 38/327 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E +L + I+ VR DPD+L G+E++ SWGY + R G+++ + L R R
Sbjct: 790 DEADLINSMIDEVRSLDPDVLCGWEVQANSWGYFMARAQSYGVDVRELLGRAP----RKR 845
Query: 414 SRDEVKN------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
S V N + L++ GR +IN WR++R E+NL YT N+ R
Sbjct: 846 SGGNVDNWSTRHTSSLKIAGRHIINTWRVMRSELNLNFYTLHNVGSTSEASR-------- 897
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
V Y+ + I+ ++++ F+ +TSE AR+FGI F+ V+SRGS
Sbjct: 898 ----------------VLSYIADLASIVLEILDETQFVTKTSEFARVFGIDFFSVISRGS 941
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
QF+VES MLR+++ +FV +SPS Q E +PLI+EP S Y P++VLDFQSLY
Sbjct: 942 QFKVESFMLRIAKPESFVLISPSRAQVGKQNGAECMPLIMEPASAFYKSPLLVLDFQSLY 1001
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCID-LNVSIRSLKKLQQNLTISPSGVAFVD 645
PSV++AYNYC+STCLGR++ + FG +D L + +L+KL+ +LTI+P+G+ +V
Sbjct: 1002 PSVMVAYNYCYSTCLGRIKDFKGQNK--FGVLDNLEIPAGTLEKLKDHLTIAPNGMIYVK 1059
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMK 672
S+R +L KML E+LDTR+MVKQ MK
Sbjct: 1060 PSVRKSLLAKMLTELLDTRVMVKQGMK 1086
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
M P+S+ Y P++VLDFQSLYPSV++AYNYC+STCLGR++ + F
Sbjct: 981 MEPASA----FYKSPLLVLDFQSLYPSVMVAYNYCYSTCLGRIKDFKGQNKF 1028
>gi|19114980|ref|NP_594068.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74625273|sp|Q9P6L6.1|DPOZ_SCHPO RecName: Full=DNA polymerase zeta catalytic subunit; AltName:
Full=Protein reversionless 3
gi|7768485|emb|CAB90776.1| DNA polymerase zeta catalytic subunit Rev3 (predicted)
[Schizosaccharomyces pombe]
Length = 1480
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 204/328 (62%), Gaps = 8/328 (2%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRITEVEK 410
V++E EL + I RQ DP I+ GYE+ SWGYL+ER Y +L ++LSR+ K
Sbjct: 720 VNSELELINEVIGLNRQLDPTIVCGYEVHNSSWGYLIERASYRFNYDLPEQLSRLKCTSK 779
Query: 411 RNSSRDE-----VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
N ++ E + + + GR V+N+WR+LR EVNL +Y+ EN++ ++ ++ P ++
Sbjct: 780 ANFAKKENAWKYTTTSSINIVGRHVLNIWRILRGEVNLLNYSLENVVLNIFKKQTPYYNQ 839
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
W+ K + + + L R + ++ + + E AR+ GI F V+SRG
Sbjct: 840 ADKVHLWQSSRFHEKQILLNYMLNRTRYCLEILSACAIVTKIREQARIIGIDFMSVISRG 899
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VESIM R+++ N++ SPS KQ A A E+LPL++EP+S LY +P++VLDFQSL
Sbjct: 900 SQFKVESIMFRIAKPENYIFPSPSAKQVAEQNALEALPLVMEPKSDLYNNPVVVLDFQSL 959
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YPS+IIAYN C+STCLG V+ + F N +I +L ++ ++ ISP+G A+V
Sbjct: 960 YPSIIIAYNLCYSTCLGPVKIVNGKVKLGFMFHSSNPNIVNL--IKNDVYISPNGYAYVK 1017
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKE 673
+++R +L KML+E+++TR MVK+ MK+
Sbjct: 1018 ENVRKSLLAKMLEELIETRNMVKRGMKD 1045
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSV 127
ES + R KP++ PSP+ K + +++ ++ D LY +P++VLDFQSLYPS+
Sbjct: 905 ESIMFRIAKPENYIFPSPSAKQVAEQNALEALPLVMEPKSD-LYNNPVVVLDFQSLYPSI 963
Query: 128 IIAYNYCFSTCLGRVE 143
IIAYN C+STCLG V+
Sbjct: 964 IIAYNLCYSTCLGPVK 979
>gi|50549261|ref|XP_502101.1| YALI0C21648p [Yarrowia lipolytica]
gi|49647968|emb|CAG82421.1| YALI0C21648p [Yarrowia lipolytica CLIB122]
Length = 1338
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 239/443 (53%), Gaps = 56/443 (12%)
Query: 234 NEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIG 293
N ++ E+ LTV+++E+H +R L PDP D + + +++ P G+I+
Sbjct: 517 NTLSQRHESAALTVMSMEVHVNTRKGLNPDPDLDPILFVVWHMLGGPS------GVIINA 570
Query: 294 QESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVS 353
++ P+ F+ IE P + V
Sbjct: 571 ED--CPD-----------------FTNIIEA-----PSTV------------------VK 588
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT--EVEKR 411
E E+ + + V +DPDIL G+E++ SWGY+ +R + E R+ ++ +
Sbjct: 589 TECEMITHLQKMVENFDPDILTGFEVQASSWGYVQDRCKTMLYPC--EFGRVQHHKMSSK 646
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
+ K + +++ GR V+NLWR++R EV+L YT EN+++HVLHERIP ++ LT
Sbjct: 647 IDTWGARKASGVKVVGRHVLNLWRMIRGEVSLLKYTLENVVFHVLHERIPFYTHDTLTEM 706
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
K + VE+ R ++L+ L+ + RT+E AR+ GI F V +RGSQ++VE
Sbjct: 707 CVGSLSDRK-LLVEYKCTRSNYNLQLLSTLEIVSRTAEQARVVGIDFSSVYTRGSQYKVE 765
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S + RL++ NF+ SPS +Q A E + L++EPESRLYT P++VLDFQSLYPSVI+
Sbjct: 766 SFLARLTKSENFMLASPSREQVGQQNALECIALVMEPESRLYTSPVLVLDFQSLYPSVIL 825
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIR 649
A+NYC+STCLG+ D G L +K+L + ++TISP+G+ FV IR
Sbjct: 826 AHNYCYSTCLGKWTDFE-KDGNTLGTEKLFYKPSLVKRLLTKDDVTISPNGLVFVKPHIR 884
Query: 650 CGILPKMLQEILDTRLMVKQSMK 672
+L +ML EIL+TR MVK + K
Sbjct: 885 VSLLARMLGEILETRFMVKDTAK 907
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 32/33 (96%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
RLYT P++VLDFQSLYPSVI+A+NYC+STCLG+
Sbjct: 805 RLYTSPVLVLDFQSLYPSVILAHNYCYSTCLGK 837
>gi|150863959|ref|XP_001382618.2| DNA polymerase zeta [Scheffersomyces stipitis CBS 6054]
gi|149385215|gb|ABN64589.2| DNA polymerase zeta, partial [Scheffersomyces stipitis CBS 6054]
Length = 1489
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 228/436 (52%), Gaps = 54/436 (12%)
Query: 262 PDPAYDEVKAIFYYLYTCPP--EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFS 319
PDP D V I YY E + ILI ++ + +V+ M+F+ N
Sbjct: 685 PDPLKDPVSIISYYFDDTNNMFENSKNRSGILIFNDN-MIDVKMLRSAMSFLEN------ 737
Query: 320 TFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEI 379
G EIE F NE + + + + ++DPDIL GYE+
Sbjct: 738 ---------------GTEIEVFD-----------NELHMVNRLVSIIEKFDPDILSGYEV 771
Query: 380 ETLSWGYLLER-GYVLGLNLNQELSRIT-EVEKRNSSR-DEVKNTQLQMPGRIVINLWRL 436
SWGYL+ER V +NL + SR + + + R + +++ GR +IN+WRL
Sbjct: 772 NASSWGYLIERFRTVYEVNLLADFSRGSYKTNGKFGDRWGYTHTSNIKINGRHIINVWRL 831
Query: 437 LRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIR 496
LRHE++L SY+ EN+ YH+LH+ +P S L+ W +Y R+ +I+
Sbjct: 832 LRHELSLTSYSLENVSYHLLHQSLPKFSNFQLSEWLRSNKFQNILTVFRYYQRRIALVIK 891
Query: 497 LIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHM 556
+IE + + R E +RL GI F RGSQFR+ESI+ RL++ N + SPS +Q M
Sbjct: 892 IIEVQELVTRNVENSRLIGIDFNSNFYRGSQFRIESILSRLAKSENLLLNSPSKQQVFEM 951
Query: 557 RAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD----- 611
+ E +PLI+EP S Y P++VLDFQSLYPSV+IAYNYCFST LGR+ + +
Sbjct: 952 KPIECIPLIMEPNSNFYKSPLVVLDFQSLYPSVMIAYNYCFSTLLGRLHNFNPNKNEIGY 1011
Query: 612 ----SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
S P G +D L + + +T+SP+G FV ++R IL KML+EIL TR+ V
Sbjct: 1012 LKNLSLPPGLVD-------LMEKENAITLSPNGYMFVKSNVRKSILAKMLEEILSTRVKV 1064
Query: 668 KQSMKEYKFSESLRNL 683
K+ MK ++ L L
Sbjct: 1065 KEVMKLFRDDRELTRL 1080
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 146
M P+S+ Y P++VLDFQSLYPSV+IAYNYCFST LGR+ +
Sbjct: 961 MEPNSN----FYKSPLVVLDFQSLYPSVMIAYNYCFSTLLGRLHNFN 1003
>gi|164662395|ref|XP_001732319.1| hypothetical protein MGL_0094 [Malassezia globosa CBS 7966]
gi|159106222|gb|EDP45105.1| hypothetical protein MGL_0094 [Malassezia globosa CBS 7966]
Length = 1491
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 200/343 (58%), Gaps = 22/343 (6%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV---LGLNLNQELSRITEV 408
V +E LF ++ VR WDPDIL GY++ SWG+L+ R L +++ EL R+
Sbjct: 705 VDSEVALFHNLVDLVRMWDPDILAGYDVARTSWGFLVRRASAVPALDMDIVYELGRMRTQ 764
Query: 409 EKRNSSRDEVKNT--QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ D +T L++ GR V+N+WRL+R + L YT E+++ +VLH R P++S
Sbjct: 765 SAVGAMTDWSASTTSSLRICGRHVLNVWRLMRTHIALTQYTLEHVVMNVLHRRTPVYSCA 824
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
LT W + + L RV + L+++ + I RT+E AR++G+ F+ VLSRGS
Sbjct: 825 TLTEWLRSYRAADVARALRYALRRVRFCVALLDKTEMITRTAEFARMYGVDFFSVLSRGS 884
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
QFRVES++LR+++ ++V SP+ Q A APE LPL+LEP S +Y P++VLDFQSLY
Sbjct: 885 QFRVESVLLRITKPRSYVLPSPNRAQVAQQNAPECLPLVLEPCSGMYRGPVVVLDFQSLY 944
Query: 587 PSVIIAYNYCFSTCLGRVE------HLGVSDSFPFGCIDLNVSIRS-----------LKK 629
P++++AYN C+STC+GRV LG + + S ++
Sbjct: 945 PTMMMAYNLCYSTCVGRVTPFKGSYKLGFTQHAELPPRTAAAPVASPATAWQQQSQEQQQ 1004
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
N+ I P+G+AFV IR GILP+ML E+L R+M K ++K
Sbjct: 1005 QDTNVYILPNGLAFVRPHIREGILPRMLHEVLSARIMTKHTLK 1047
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 70 ESSLERSMKPDDR--PSPTRKNKSTRSSFDS---DMFPSSSSRDRLYTDPIIVLDFQSLY 124
ES L R KP PSP R + +++ + + P S +Y P++VLDFQSLY
Sbjct: 889 ESVLLRITKPRSYVLPSPNRAQVAQQNAPECLPLVLEPCSG----MYRGPVVVLDFQSLY 944
Query: 125 PSVIIAYNYCFSTCLGRV 142
P++++AYN C+STC+GRV
Sbjct: 945 PTMMMAYNLCYSTCVGRV 962
>gi|294655851|ref|XP_458050.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
gi|199430655|emb|CAG86117.2| DEHA2C08558p [Debaryomyces hansenii CBS767]
Length = 1588
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 231/449 (51%), Gaps = 58/449 (12%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCP---PEEDRKVGIILIGQESELPEV 301
LT +EIH + L P+P D + IFY + + KVGI++ +
Sbjct: 741 LTNFHLEIHVNTHNDLLPNPDVDPISVIFYTFSDSNHMFDKNNNKVGILIYHEPG----- 795
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV---SNEKEL 358
+++E F+ +E V +L+E+ V S+EK +
Sbjct: 796 -----------SQREDFAKQLEKVS-----------------SFLVEKPAVAIFSDEKSM 827
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSR--ITEVEKRNSSR 415
+ I V +DPDIL GYEI LSWGY++ER +NL E SR K
Sbjct: 828 INQLIRLVECFDPDILSGYEINALSWGYVIERFRNAYDINLLFEFSRCKFKSNGKFGDRW 887
Query: 416 DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
+ ++ GR ++N+WRLLR E++L +Y+ EN+ YH+LH+ +P +S L+ W+
Sbjct: 888 GYTHTSAFKINGRHILNVWRLLRSELSLTNYSLENMSYHLLHQTLPRYSNFQLSQWYYGN 947
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
++YL RV I+++I+ + I R E +RL GI F RGSQF+VESI+
Sbjct: 948 DFSELLSVFKYYLRRVQLIMKIIDIQELITRNVEQSRLIGIDFNSNFYRGSQFKVESILC 1007
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
RL++ N + S S +Q MR E +PLI+EP+S Y P+IVLDFQSLYPS++IAYNY
Sbjct: 1008 RLTKAENILLNSVSKQQVHEMRPLECIPLIMEPDSNFYKSPLIVLDFQSLYPSIMIAYNY 1067
Query: 596 CFSTCLGRVEHLGVSDS---------FPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
C+ST LG++ + P G +DL L ISP+G FV
Sbjct: 1068 CYSTILGKLHGFSPRKNIIGYLKNLKLPPGLVDLFAK-------NDGLNISPNGYVFVKS 1120
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYK 675
SIR +L KML+EIL+ R+ VK MK +K
Sbjct: 1121 SIRKSMLAKMLEEILNARINVKSVMKLFK 1149
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P+IVLDFQSLYPS++IAYNYC+ST LG++
Sbjct: 1044 FYKSPLIVLDFQSLYPSIMIAYNYCYSTILGKL 1076
>gi|170575674|ref|XP_001893336.1| DNA polymerase family B containing protein [Brugia malayi]
gi|158600728|gb|EDP37834.1| DNA polymerase family B containing protein [Brugia malayi]
Length = 1385
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/271 (47%), Positives = 175/271 (64%), Gaps = 6/271 (2%)
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEH 486
GRI+IN+WR+LRHEV L++YT N++ VL R P +S+ L+ W + ++H
Sbjct: 735 GRILINVWRILRHEVALRNYTISNVVNSVLKRRFPHYSFSTLSEWILSGERDLIALVLKH 794
Query: 487 YLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAV 546
+ + ++ +LDF RTSEMARL+GIQF EVL+RGSQFRVES++LRL+R +VA
Sbjct: 795 MKLYCQLNLLILLRLDFFTRTSEMARLYGIQFNEVLTRGSQFRVESMLLRLARRERYVAP 854
Query: 547 SPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 606
S S QR M +PE+LPL +EPES Y DP+IVLDFQSLYPSVIIAYNYCF+TC G+V H
Sbjct: 855 SISPVQRQAMCSPETLPLTMEPESGFYRDPVIVLDFQSLYPSVIIAYNYCFTTCFGKVSH 914
Query: 607 L----GVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
+ FG ++ N I + + L ISP+G F K+++ G++P ML+EI
Sbjct: 915 VENICTADKIIEFGGLEYNCPIDDIVSMLTTNKLHISPTGAIFCRKNVQKGLMPVMLEEI 974
Query: 661 LDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
L+TR+MVK++ KE K L + M L
Sbjct: 975 LNTRVMVKKAAKECKNDRRLARILEARQMAL 1005
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPSVIIAYNYCF+TC G+V H+
Sbjct: 880 FYRDPVIVLDFQSLYPSVIIAYNYCFTTCFGKVSHV 915
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 243 YYLTVLAVEIHAIS-RALLKPDPAYDEVKAIFYYLY--TCPPEEDRKV-GIILIGQESEL 298
++L V+++EI +S R + PDP +D++ IFY + C EE V G++L + L
Sbjct: 639 HHLCVMSMEILTLSSRGMPVPDPQHDKILGIFYTISMDVCMHEEINNVSGVLLNMDDVLL 698
Query: 299 PEVRTKPIQMNFVSNEKELFSTFIENV-RQWDP 330
++ K FV++E +LF F+ + R+ DP
Sbjct: 699 ADMVGKNEFYTFVASEIDLFDAFVNVIHRELDP 731
>gi|255726064|ref|XP_002547958.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
gi|240133882|gb|EER33437.1| hypothetical protein CTRG_02255 [Candida tropicalis MYA-3404]
Length = 1634
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 241/469 (51%), Gaps = 44/469 (9%)
Query: 224 GDYQMGLDNLNEVTSHVENYYLTVLAVEIHAIS-RALLKPDPAYDEVKAIFYYLYTCPPE 282
GD++ +++ E YLT +EIHA + L DP D V I Y
Sbjct: 784 GDFKCSYNSVKVSRKPDEFNYLTSFHLEIHANPPNSKLTVDPLRDPVCLIIYSFDDANVM 843
Query: 283 EDR---KVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIE 339
D K GI++ +TK I N +S L ST ++ IE
Sbjct: 844 FDHCKFKSGILMFD--------KTKRIDENTIS----LLSTTLDQ------------HIE 879
Query: 340 TFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNL 398
F +E E+F+ + V +DPDIL GYE+ ++SWGYL+ER V LNL
Sbjct: 880 IFE-----------DELEMFAKLVNLVELFDPDILSGYEVNSMSWGYLVERSKMVFDLNL 928
Query: 399 NQELSR--ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
LSR K + +++ GR ++N+WR+LR E++L SY+ EN+ YH+L
Sbjct: 929 MANLSRGNFKSNGKFGDRWGYTHTSNIEISGRHMLNVWRILRSEMSLTSYSLENVTYHLL 988
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
H +P +S L+ W + + + +Y RV I+++I + I R E +RL GI
Sbjct: 989 HHTLPKYSNYQLSQWLSKKRFSDIVIVLSYYTERVNTILKIINVQELITRNVEHSRLIGI 1048
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+F RGSQF++ESI+ R+++ + + SPS + MR E +PLILEP+S Y P
Sbjct: 1049 EFNSNFYRGSQFKIESILSRIAKPESLLLNSPSKQDVHEMRPIECIPLILEPKSNFYKSP 1108
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVS--DSFPFGCIDLNVSIRSLKKLQQNL 634
++VLDFQSLYPS++IAYNYC+ST L ++ + S D + L + L + +
Sbjct: 1109 LVVLDFQSLYPSIMIAYNYCYSTLLCKLHNYKPSKNDIGYLKNLKLAPGLVDLLIKEDGV 1168
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
ISP+G FV IR IL KML+EIL+ R+ VK+ MK +K L L
Sbjct: 1169 NISPNGFVFVKSHIRKSILAKMLEEILNIRIKVKEVMKLFKDDTELTRL 1217
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
+ Y P++VLDFQSLYPS++IAYNYC+ST L ++ +
Sbjct: 1101 KSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLLCKLHN 1138
>gi|298715260|emb|CBJ27909.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 3112
Score = 234 bits (598), Expect = 8e-59, Method: Composition-based stats.
Identities = 118/261 (45%), Positives = 177/261 (67%), Gaps = 8/261 (3%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL--GLNLNQELSRIT--E 407
V +E+++F + + DPD ++G+E++ S GY++ERG + +++ + LSR +
Sbjct: 2188 VCSEEQVFRALVGVFCRHDPDFVVGWEVQGDSLGYVVERGLNMEPSMDMTRLLSRTPGRD 2247
Query: 408 VEKRNSSRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+KRN+ RDE T + + GR V+N+WRL+R E+ L SYT +++ HVL +RIP S
Sbjct: 2248 ADKRNA-RDEWGKTHGSGIWLTGRTVLNMWRLMRSELKLCSYTLQSVAEHVLRKRIPSFS 2306
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+L + W+ R + + L R T + ++++LD +GRTSEMARLFGI F+ VLSR
Sbjct: 2307 LQLRSRWFAGRNVAARSRALADPLGRATACLSIMDKLDLLGRTSEMARLFGIDFFSVLSR 2366
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQ+RVE++MLR+ + +NFVAVSPS Q A A ES+PL+ EP SR YT P++VLDFQS
Sbjct: 2367 GSQYRVEAVMLRVLKPHNFVAVSPSRLQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQS 2426
Query: 585 LYPSVIIAYNYCFSTCLGRVE 605
LYPS++IAYN C++T LG+ +
Sbjct: 2427 LYPSMMIAYNLCYTTILGKFD 2447
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 70 ESSLERSMKPDD--RPSPTRKNKSTRSSFDSDMFP-SSSSRDRLYTDPIIVLDFQSLYPS 126
E+ + R +KP + SP+R + +++ +S P R R YT P++VLDFQSLYPS
Sbjct: 2373 EAVMLRVLKPHNFVAVSPSRLQVAGQAAMES--IPLVFEPRSRFYTSPVVVLDFQSLYPS 2430
Query: 127 VIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQS 164
++IAYN C++T LG+ + S G + ESN S
Sbjct: 2431 MMIAYNLCYTTILGKFDPKTGGTSGNLGALPYPESNTS 2468
Score = 43.5 bits (101), Expect = 0.34, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++P+ F S+R GILP ML+EIL+TR+M+K +M+
Sbjct: 2616 LAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMR 2652
>gi|403359875|gb|EJY79597.1| DNA polymerase [Oxytricha trifallax]
Length = 1978
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 218/390 (55%), Gaps = 68/390 (17%)
Query: 350 HFVS-NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR---- 404
H ++ NE L IE R++DPDI++G+E E +S GY+ +R +G+ ++ LSR
Sbjct: 1107 HLIAKNEVNLLQKVIELFREFDPDIIVGHETEAMSIGYICKRAEQIGIQMSNLLSRTPMT 1166
Query: 405 -----------------------------------------ITEVEKRNSSRDEVKNTQL 423
+ E +K+ + Q+
Sbjct: 1167 LKPLNESFYNQKLLKESKLHHQSVDDQMDQDEALRQQNQGSVNEKKKKMGVFYQKFGQQV 1226
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
++ GRI+INLW +LR+E+NL +Y EN +H+L +R P + +LT WW+ ++
Sbjct: 1227 KLNGRIIINLWSVLRNEINLTNYDLENSCFHILKKREPRFDYDMLTMWWQRG----QFSH 1282
Query: 484 VEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
V +YLI R+ I +++ LD I R MA+++GI + +++RGSQFRVES++ ++++ +
Sbjct: 1283 VANYLIKRLLNIEAILDTLDLINRDINMAKVYGIDYESIMTRGSQFRVESLLSKITKSQD 1342
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
F+ +S S++Q E +PL++EP+ + YT P+ ++DFQSLYPSVIIAYN C+STCLG
Sbjct: 1343 FLLLSASVQQVRQQNELEVIPLVIEPDKQFYTSPVDIVDFQSLYPSVIIAYNLCYSTCLG 1402
Query: 603 RVEHLG---VSDSFPFGCIDLNVSIRSLKKLQ--QNLT------------ISPSGVAFVD 645
++ + S+ G ++ +I+S ++ Q+LT I+P+ FV
Sbjct: 1403 KIIQINPESTSNKRKLGVYNIPANIKSFFGIENDQDLTEEQEQYILDSIIIAPNLNCFVK 1462
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R G+LP+ML+EIL TR+MVK+SMK YK
Sbjct: 1463 PHLRLGLLPRMLREILYTRIMVKKSMKLYK 1492
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
+ YT P+ ++DFQSLYPSVIIAYN C+STCLG++
Sbjct: 1371 QFYTSPVDIVDFQSLYPSVIIAYNLCYSTCLGKI 1404
>gi|393245811|gb|EJD53321.1| DNA/RNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 822
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 194/336 (57%), Gaps = 23/336 (6%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
V +E +L I+ V + DPDI+ G+E++ SWGYL R ++ + R R
Sbjct: 205 VDSEIDLLKRVIDVVLELDPDIVAGWEVQMASWGYLRGRANAHSVDFLEACGRARFPAGR 264
Query: 412 NSSRDEVKNTQL----QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
+ NT L Q+ GR V+N+ ++R + L SY E + +HVL R+P + K
Sbjct: 265 QQGNES--NTTLTHIIQLVGRHVLNVREMMRVSMGLSSYNLETVAFHVLRRRLPHYPAKT 322
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
LT W + L+ + + R ++ ++ + + I + E AR+ GI F +SRGSQ
Sbjct: 323 LTGWMQSALPLHNSRVLAYLAERTASVLDILHETETISKHVESARVLGIDFSSSVSRGSQ 382
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
++VES + R+++ +FV +SPS ++ + + P++LEP + Y P++VLDFQSLYP
Sbjct: 383 YKVESFLFRIAKPESFVMLSPSHEEVGKQESTYATPMVLEPSAGFYPSPLVVLDFQSLYP 442
Query: 588 SVIIAYNYCFSTCLGRVE------HLGVSDSF--PFGCIDLNVSIRSLKKLQQNLTISPS 639
S++IAYNYC+STCLGRVE LGV F P G +D KLQ ++++P+
Sbjct: 443 SIMIAYNYCYSTCLGRVEGQQSHQRLGVRPEFKLPPGLLD---------KLQDYISVAPN 493
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
G+ + K +R G+L +MLQE+LDTR+MV+Q+MK K
Sbjct: 494 GIMYAKKEVRAGLLGRMLQELLDTRVMVQQAMKSSK 529
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE------HLGVSDSF 151
Y P++VLDFQSLYPS++IAYNYC+STCLGRVE LGV F
Sbjct: 427 FYPSPLVVLDFQSLYPSIMIAYNYCYSTCLGRVEGQQSHQRLGVRPEF 474
>gi|190347734|gb|EDK40067.2| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC 6260]
Length = 1593
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 238/453 (52%), Gaps = 46/453 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR-KVGIILIGQESELPEVRT 303
LT EIH + + PDP + V AIFY+ D+ V +L+ +E+
Sbjct: 761 LTNFHAEIHVNTDSNSLPDPELNSVSAIFYHFDDANLMFDKIPVTGVLVNRET------- 813
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
N L + ++ +IETF +EK + +
Sbjct: 814 --------CNNVHLLKSAVD------------MKIETFE-----------DEKSMVDRLL 842
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT--EVEKRNSSRDEVKN 420
V +DPDIL GYEI SWGYL+ER +NL LSR T K
Sbjct: 843 FLVEAFDPDILCGYEINASSWGYLVERFRAAYDINLLPLLSRCTFKSNGKFGDRWGYTHT 902
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ L++ GR ++N+WR+ R V L SY+ EN+++H+LH+ I S + L+ W+
Sbjct: 903 SALKINGRHLLNVWRVFRSNVTLTSYSLENVVFHILHQTIAKCSNRSLSKWFRSDNASKL 962
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
+ +Y+ R+ + ++++ + I + E AR G+ FY V RGSQ++VESI+ R+S++
Sbjct: 963 LFVLNYYMQRILLVQKILDVREIITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKV 1022
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
+ + SPS Q ++M+ E++ LILEP++ Y P++VLDFQSLYPS++IAYNYCF+T
Sbjct: 1023 ESLLLNSPSKTQVSNMKPLEAISLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTL 1082
Query: 601 LGRVEHLG-VSDSFPF-GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
LGR++ ++ F +DL + +L K ++ +SP+G F S+R +L KML+
Sbjct: 1083 LGRLDGFDPKKNTIGFLKHLDLPPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLE 1142
Query: 659 EILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
EIL+TR+ VK M +K +L L LNS L
Sbjct: 1143 EILNTRIQVKTVMSMFKDDTNLAKL--LNSRQL 1173
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y P++VLDFQSLYPS++IAYNYCF+T LGR++
Sbjct: 1054 FYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLD 1087
>gi|241953567|ref|XP_002419505.1| DNA polymerase zeta catalytic subunit, putative [Candida dubliniensis
CD36]
gi|223642845|emb|CAX43100.1| DNA polymerase zeta catalytic subunit, putative [Candida dubliniensis
CD36]
Length = 1630
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 204/351 (58%), Gaps = 21/351 (5%)
Query: 347 LERHF--VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELS 403
L +H +E ++ + + V +DPDIL GYE+ ++SWGY++ER V G+N+ +LS
Sbjct: 870 LNKHIEVFDDELKMITKLVTLVELFDPDILSGYEVNSMSWGYIVERLRDVFGMNIMLDLS 929
Query: 404 R--ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
R K + +++ GR ++N+WR LR E++L SY+ EN+ YH+LH+ +P
Sbjct: 930 RGSFKSNGKFGDRWGYTHTSNIKISGRHMLNVWRPLRSEMSLTSYSLENVAYHLLHKSLP 989
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
+S L+ W + + +Y+ RV I+++I + I R E +RL GI+F
Sbjct: 990 RYSNYTLSEWLKEGNFSSLLTVLSYYINRVDIILKIINVQELITRNVEHSRLIGIEFNSN 1049
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
RGSQ++VESI+ R+ + + + SPS +Q MR E +PLILEP+S Y P++VLD
Sbjct: 1050 FYRGSQYKVESILARICKPESLLLNSPSKQQVHEMRPIECIPLILEPKSNFYKSPLVVLD 1109
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS---------FPFGCIDLNVSIRSLKKLQQ 632
FQSLYPS++IAYNYC+ST +G++ + + + PFG ++L L+K +
Sbjct: 1110 FQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGYLHNLKIPFGLVNL------LEK-ED 1162
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
ISP+G FV IR IL KML+EIL R+ +KQ MK +K L L
Sbjct: 1163 GFNISPNGFVFVKSHIRKSILAKMLEEILSIRIKIKQVMKLFKEDAELTKL 1213
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
+ Y P++VLDFQSLYPS++IAYNYC+ST +G++ +
Sbjct: 1097 KSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHN 1134
>gi|238881005|gb|EEQ44643.1| hypothetical protein CAWG_02917 [Candida albicans WO-1]
Length = 1630
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 21/354 (5%)
Query: 344 GYLLERHF--VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQ 400
+ L +H +E ++ + + V +DPDIL GYE+ ++SWGY++ER V G+N+
Sbjct: 867 SHTLNKHIEIFDDELKMITKLVTLVELFDPDILSGYEVNSMSWGYIVERLRDVFGINIMS 926
Query: 401 ELSR--ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
+LSR K + +++ GR ++N+WR LR E++L SY+ EN+ YH+LH+
Sbjct: 927 DLSRGSFKSNGKFGDRWGYTHTSNIEISGRHMLNVWRPLRSELSLTSYSLENVTYHLLHK 986
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+P +S L+ W + T + + +Y+ R+ ++++I + I R E +RL GI+F
Sbjct: 987 SLPRYSNYRLSEWLKEGTFSSIFAVLSYYINRIDIVLKIINVQELITRNVEHSRLIGIEF 1046
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
RGSQ++VESI+ R+ + + + SPS +Q MR E +PLILEP+S Y P++
Sbjct: 1047 NSNFYRGSQYKVESILARICKPESLLLNSPSKQQVHEMRPIECIPLILEPKSNFYKSPLV 1106
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS---------FPFGCIDLNVSIRSLKK 629
VLDFQSLYPS++IAYNYC+ST +G++ + + + P+G ++L L++
Sbjct: 1107 VLDFQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGYLRNLKIPYGLVNL------LQR 1160
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ ISP+G FV IR +L KML+EIL R+ +KQ MK +K L L
Sbjct: 1161 -EDGFNISPNGFVFVKSHIRKSVLAKMLEEILSIRIKIKQVMKLFKEDAELTKL 1213
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
+ Y P++VLDFQSLYPS++IAYNYC+ST +G++ +
Sbjct: 1097 KSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHN 1134
>gi|68478723|ref|XP_716630.1| DNA polymerase zeta subunit fragment [Candida albicans SC5314]
gi|46438302|gb|EAK97635.1| DNA polymerase zeta subunit fragment [Candida albicans SC5314]
Length = 1261
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 21/354 (5%)
Query: 344 GYLLERHF--VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQ 400
+ L +H +E ++ + + V +DPDIL GYE+ ++SWGY++ER V G+N+
Sbjct: 867 SHTLNKHIEIFDDELKMITKLVTLVELFDPDILSGYEVNSMSWGYIVERLRDVFGINIMS 926
Query: 401 ELSR--ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
+LSR K + +++ GR ++N+WR LR E++L SY+ EN+ YH+LH+
Sbjct: 927 DLSRGSFKSNGKFGDRWGYTHTSNIEISGRHMLNVWRPLRSELSLTSYSLENVTYHLLHK 986
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+P +S L+ W + T + + +Y+ R+ ++++I + I R E +RL GI+F
Sbjct: 987 SLPRYSNYRLSEWLKEGTFSSIFAVLSYYINRIDIVLKIINVQELITRNVEHSRLIGIEF 1046
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
RGSQ++VESI+ R+ + + + SPS +Q MR E +PLILEP+S Y P++
Sbjct: 1047 NSNFYRGSQYKVESILARICKPESLLLNSPSKQQVHEMRPIECIPLILEPKSNFYKSPLV 1106
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS---------FPFGCIDLNVSIRSLKK 629
VLDFQSLYPS++IAYNYC+ST +G++ + + + P+G ++L L++
Sbjct: 1107 VLDFQSLYPSIMIAYNYCYSTLVGKLHNYRPTKNNIGYLRNLKIPYGLVNL------LQR 1160
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+ ISP+G FV IR +L KML+EIL R+ +KQ MK +K L L
Sbjct: 1161 -EDGFNISPNGFVFVKSHIRKSVLAKMLEEILSIRIKIKQVMKLFKEDAELTKL 1213
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
+ Y P++VLDFQSLYPS++IAYNYC+ST +G++ +
Sbjct: 1097 KSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLVGKLHN 1134
>gi|50294045|ref|XP_449434.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528748|emb|CAG62410.1| unnamed protein product [Candida glabrata]
Length = 1481
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 232/435 (53%), Gaps = 42/435 (9%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY--TCPPEEDRKVGIILIGQESELPEVR 302
LT ++EIH +R L PDP DEV IF+ + T P D ++ I+ + E
Sbjct: 648 LTHFSLEIHVNTRGDLLPDPRKDEVSVIFWKVDSDTFPFSIDLQLEGIMYTNKLE----- 702
Query: 303 TKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
+E +E++ P ++ YE +E +F
Sbjct: 703 ------------RENLIETLESISGGVP--IMEYE----------------DEFSMFDAL 732
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGY-VLGLNLNQELSRITEVE--KRNSSRDEVK 419
+ + +DPD+L GYEI SWGY+ ER V N+ E+SR+ K S K
Sbjct: 733 TDLILLFDPDLLSGYEIHNSSWGYIFERSLSVHKFNIANEISRVNMGAQFKLRDSWGFKK 792
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLY 479
++ + + GR V+N+WRLLR E+ + Y+FEN+++ +L R+P +S LT W +
Sbjct: 793 SSGISITGRYVLNIWRLLRKEIAVTQYSFENMVHLLLKIRLPKYSCSHLTSLWSNFKTGN 852
Query: 480 KWMT-VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ T + +YL RV I +++++ F E ARL GI F V +RGSQ++VES ++R+
Sbjct: 853 ELKTFLNYYLTRVRLNIGILKKISFTLNVMEEARLIGIDFQSVYNRGSQYKVESFLIRIC 912
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ N++ +SPS + E +PL++EPES Y P++VLDFQSLYPS++ YNYC+S
Sbjct: 913 KSENYILLSPSKVAVQKQKPLECVPLVMEPESAFYKSPLLVLDFQSLYPSIMSGYNYCYS 972
Query: 599 TCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
T +GRV L + G + + LKKL+ ++ I+P+GV + + +R L KML
Sbjct: 973 TMMGRVRELDGTKR-TLGVTNFELKSELLKKLRDDIRIAPNGVIYAKEHLRKSTLSKMLS 1031
Query: 659 EILDTRLMVKQSMKE 673
EIL+ R M+K+++ +
Sbjct: 1032 EILEIRFMIKKTISD 1046
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y P++VLDFQSLYPS++ YNYC+ST +GRV L
Sbjct: 946 FYKSPLLVLDFQSLYPSIMSGYNYCYSTMMGRVREL 981
>gi|146414932|ref|XP_001483436.1| hypothetical protein PGUG_04165 [Meyerozyma guilliermondii ATCC 6260]
Length = 1593
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 238/453 (52%), Gaps = 46/453 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDR-KVGIILIGQESELPEVRT 303
LT EIH + + PDP + V AIFY+ D+ V +L+ +E+
Sbjct: 761 LTNFHAEIHVNTDSNSLPDPELNLVSAIFYHFDDANLMFDKIPVTGVLVNRET------- 813
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
N L + ++ +IETF +EK + +
Sbjct: 814 --------CNNVHLLKSAVD------------MKIETFE-----------DEKSMVDRLL 842
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRIT--EVEKRNSSRDEVKN 420
V +DPDIL GYEI SWGYL+ER +NL LSR T K
Sbjct: 843 FLVEAFDPDILCGYEINASSWGYLVERFRAAYDINLLPLLSRCTFKSNGKFGDRWGYTHT 902
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYK 480
+ L++ GR ++N+WR+ R V L SY+ EN+++H+LH+ I S + L+ W+
Sbjct: 903 SALKINGRHLLNVWRVFRSNVTLTSYSLENVVFHILHQTIAKCSNRSLSKWFRSDNASKL 962
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
+ +Y+ R+ + ++++ + I + E AR G+ FY V RGSQ++VESI+ R+S++
Sbjct: 963 LFVLNYYMQRILLVQKILDVREIITKNVEEARFIGVDFYSVFFRGSQYKVESILSRISKV 1022
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
+ + SPS Q ++M+ E++ LILEP++ Y P++VLDFQSLYPS++IAYNYCF+T
Sbjct: 1023 ESLLLNSPSKTQVSNMKPLEAISLILEPDANFYKSPLVVLDFQSLYPSIMIAYNYCFTTL 1082
Query: 601 LGRVEHLG-VSDSFPF-GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
LGR++ ++ F +DL + +L K ++ +SP+G F S+R +L KML+
Sbjct: 1083 LGRLDGFDPKKNTIGFLKHLDLPPGLVNLLKENDDINLSPNGYMFAKSSVRKSLLSKMLE 1142
Query: 659 EILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
EIL+TR+ VK M +K +L L LNS L
Sbjct: 1143 EILNTRIQVKTVMLMFKDDTNLAKL--LNSRQL 1173
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y P++VLDFQSLYPS++IAYNYCF+T LGR++
Sbjct: 1054 FYKSPLVVLDFQSLYPSIMIAYNYCFTTLLGRLD 1087
>gi|149241046|ref|XP_001526263.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450386|gb|EDK44642.1| hypothetical protein LELG_02821 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1803
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 197/335 (58%), Gaps = 5/335 (1%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVE--K 410
+E+E+ +E V +DPDIL GYE+ ++SWGY++ER V + +LSR T+ K
Sbjct: 1051 DEQEMIMRLVELVNIFDPDILSGYEVNSMSWGYIIERCRLVFETTIMSDLSRGTQRSNGK 1110
Query: 411 RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+++ GR ++N+WR+L+ +++L SYT EN+ YH+LH +P + L+
Sbjct: 1111 FGDRWGYTHTANIEINGRHILNVWRILKSDLSLTSYTLENVCYHLLHVSVPRYLAHQLSQ 1170
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
WW+ ++ +Y+ R+ +++I + I R E +RL GI+F RGSQ++V
Sbjct: 1171 WWQSGNFQNLYVVASYYMRRIELTMKIIFVQELITRNVEHSRLIGIEFNSNFYRGSQYKV 1230
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
ESI+ R+++ + + SPS Q MR E +PL++EP+S Y P+IVLDFQSLYP+++
Sbjct: 1231 ESILARITKPESLLLNSPSKYQVHEMRPIECIPLVMEPKSSFYKSPLIVLDFQSLYPTIM 1290
Query: 591 IAYNYCFSTCLGRVEHL--GVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
IAYNYCFST +G++ + ++ +DL + L K + +SP+G AFV +
Sbjct: 1291 IAYNYCFSTLIGKLHNFKPKKNNVGYLKNLDLPPGMIDLLKNDDAINVSPNGFAFVKSHV 1350
Query: 649 RCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
R +L KML+EIL+ R+ K MK + L+ L
Sbjct: 1351 RKSVLAKMLEEILNIRIKTKSVMKMFGDDTELKKL 1385
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
M P SS Y P+IVLDFQSLYP+++IAYNYCFST +G++ +
Sbjct: 1266 MEPKSS----FYKSPLIVLDFQSLYPTIMIAYNYCFSTLIGKLHNF 1307
>gi|426354275|ref|XP_004044593.1| PREDICTED: DNA polymerase zeta catalytic subunit [Gorilla gorilla
gorilla]
Length = 2921
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 207/336 (61%), Gaps = 42/336 (12%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TP++ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 2223 VNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLE 2279
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++
Sbjct: 2280 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDK--------------------- 2318
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+ F +++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2319 -TVFSQDIRYQTP-LLIRSGITG------LEVTYAADEKALFHEIANIIKRYDPDILLGY 2370
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L + +SR+ + +E R + RDE + +++ + GRI +
Sbjct: 2371 EIQMHSWGYLLQRAAALSIDLCRMISRVPDDKIENRFAAERDEYGSYTMSEINIVGRITL 2430
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY+W V+HY+ RV
Sbjct: 2431 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRV 2490
Query: 492 TGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
G ++++EQLD IG+TSEMARLFGIQF VL+RGSQ
Sbjct: 2491 RGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRGSQ 2526
>gi|260944378|ref|XP_002616487.1| hypothetical protein CLUG_03728 [Clavispora lusitaniae ATCC 42720]
gi|238850136|gb|EEQ39600.1| hypothetical protein CLUG_03728 [Clavispora lusitaniae ATCC 42720]
Length = 1533
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 240/474 (50%), Gaps = 48/474 (10%)
Query: 217 AMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYL 276
A+T Y + LN S N L++L +E+HA + + +PDP D + I Y
Sbjct: 669 AITQTNDFKYSHRISKLNRNPSGYLN--LSMLYMEVHADTESPCRPDPLKDPITMIIYRF 726
Query: 277 YTCP---PEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDIL 333
P+E I+ + + R Q+ VS+ L
Sbjct: 727 DDSNHMFPDEYSTNRILFCCNKDFVQTKR----QLKIVSSNLNL---------------- 766
Query: 334 IGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GY 392
IE F E E+ F+ V +DP+IL GYEI SWGYL+ER
Sbjct: 767 ---HIECFR-----------TEMEMVDSFLLRVDLFDPEILGGYEINASSWGYLIERMQN 812
Query: 393 VLGLNLNQELSRITEVEKRNSSRDE---VKNTQLQMPGRIVINLWRLLRHEVNLQSYTFE 449
V +N+ LSR T+++ D + +++ GR +IN+WR+L+ EVNL SY+ E
Sbjct: 813 VYAINILSRLSR-TKIKGNGRYGDRWGFTHTSAIKINGRHLINVWRILKSEVNLTSYSLE 871
Query: 450 NIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSE 509
N+ +++LH+ +P S LT W M E+Y R+ + + + + I + E
Sbjct: 872 NLSFNLLHQTMPRFSNLELTNWRRGGAIQELIMFCEYYSTRLNSALLITDSREIIIKNVE 931
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
+RL GI F RGSQ++VESI++R+++ N + SPS +Q MRA +++PLI+EPE
Sbjct: 932 QSRLIGIDFNSNFYRGSQYKVESILIRIAKSENVLLNSPSKQQVHEMRALDAIPLIMEPE 991
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCI---DLNVSIRS 626
+ Y P++VLDFQSLYPS++IAYNYC+ST +G+ E D G + +L + I
Sbjct: 992 ANFYKSPLVVLDFQSLYPSIMIAYNYCYSTLIGKAEGFR-QDKNAVGYLKHHNLPLGIVD 1050
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESL 680
+ +TISP+G+ FV R +L KMLQEIL+ R+ VK ++ + L
Sbjct: 1051 ILDKNGGITISPNGLVFVSSKFRKSLLSKMLQEILNMRINVKSVASAFQNDDDL 1104
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y P++VLDFQSLYPS++IAYNYC+ST +G+ E
Sbjct: 994 FYKSPLVVLDFQSLYPSIMIAYNYCYSTLIGKAE 1027
>gi|448522872|ref|XP_003868799.1| Rev3 protein [Candida orthopsilosis Co 90-125]
gi|380353139|emb|CCG25895.1| Rev3 protein [Candida orthopsilosis]
Length = 1719
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 195/341 (57%), Gaps = 19/341 (5%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVE--KR 411
E+++ +E V +DPDIL GYE+ ++SWGY++ER V +N+ ELSR T K
Sbjct: 970 ERKMVEKLVELVEMYDPDILSGYEVNSMSWGYIVERFREVYQVNIMSELSRGTHRSNGKL 1029
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
+++ GR ++N+WR+L+ E+ L SYT EN+ YH+LH +P +S ++ W
Sbjct: 1030 GDRWGYTHTASIEINGRHILNVWRILKSELALTSYTLENVCYHLLHRSLPRYSLHQISQW 1089
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ + +Y+ R+ +++I + I R E +RL GI+F RGSQ++VE
Sbjct: 1090 LQSGKFKDIQVAFLYYMRRIELTLKIISVRELITRNVEHSRLIGIEFNSNFYRGSQYKVE 1149
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
SI+ R+S+ + + SPS Q MR E +PLILEP++ Y P++VLDFQSLYPS++I
Sbjct: 1150 SILSRISKTESILLNSPSKMQVHEMRPIECIPLILEPKANFYKSPLVVLDFQSLYPSIMI 1209
Query: 592 AYNYCFSTCLGRVEHLG---------VSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
AYNYC+ST +G++ + + + P G +DL + + +SP+G A
Sbjct: 1210 AYNYCYSTLIGKLHNFKPKKNNIGYLKNHNLPPGLVDLLTT-------DDAVNVSPNGFA 1262
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
FV +R IL KML+EIL+ R+ K MK +K L L
Sbjct: 1263 FVKSHVRKSILAKMLEEILNIRIKTKSVMKLFKDDTELTKL 1303
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
+ Y P++VLDFQSLYPS++IAYNYC+ST +G++ +
Sbjct: 1187 KANFYKSPLVVLDFQSLYPSIMIAYNYCYSTLIGKLHNF 1225
>gi|354548042|emb|CCE44777.1| hypothetical protein CPAR2_405800 [Candida parapsilosis]
Length = 1698
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 198/347 (57%), Gaps = 7/347 (2%)
Query: 342 SWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQ 400
S G +E E ++ IE V +DPDIL GYE+ ++SWGY++ER V LN+
Sbjct: 938 SLGLFIE--LFDEETKMVEKLIEFVGIYDPDILSGYEVNSMSWGYVVERFREVYQLNIMS 995
Query: 401 ELSRITEVE--KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
+LSR T K +++ GR ++N+WR+L+ E+ L SYT EN+ YH+LH
Sbjct: 996 KLSRGTHRSNGKLGDRWGYTHTANIEINGRHILNVWRILKSEMALTSYTLENVCYHLLHR 1055
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+P +S ++ W + + + +Y+ R+ +++I + I R E +RL GI+F
Sbjct: 1056 PLPRYSLHQISQWLQSGRFKDIQVALSYYMKRIELTLKIISVQELITRNVEHSRLIGIEF 1115
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
RGSQ++VESI+ R+S+ + + SPS Q MR E +PLILEP+S Y P++
Sbjct: 1116 NSNFYRGSQYKVESILSRISKSESILLNSPSKVQVHEMRPIECIPLILEPKSNFYKSPLV 1175
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNV--SIRSLKKLQQNLTI 636
VLDFQSLYPS++IAYNYC+ST +G++ + + +LN+ I L + I
Sbjct: 1176 VLDFQSLYPSIMIAYNYCYSTLIGKLHNFKPKKNNIGYLKNLNLPPGIVDLLMEDDAVNI 1235
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
SP+G AFV +R IL KML+EIL+ RL K MK +K L L
Sbjct: 1236 SPNGFAFVKSHVRKSILAKMLEEILNIRLKTKSVMKLFKDDTELTKL 1282
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
+ Y P++VLDFQSLYPS++IAYNYC+ST +G++ +
Sbjct: 1166 KSNFYKSPLVVLDFQSLYPSIMIAYNYCYSTLIGKLHNF 1204
>gi|405950503|gb|EKC18487.1| DNA polymerase zeta catalytic subunit [Crassostrea gigas]
Length = 3716
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 159/256 (62%), Gaps = 58/256 (22%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+V NE+ELF ++ +WDPDIL+G+EI+ SWGYLL+R L +NL ++SRI + +K
Sbjct: 3485 YVENEEELFMEVLKLFSRWDPDILVGFEIQKFSWGYLLQRASQLSVNLCAQMSRIPDEKK 3544
Query: 411 RNSSRDEVK------NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
++S + E ++++ + GR+++NLWR+
Sbjct: 3545 KSSFKAESDEWGSDHSSEIHIAGRVILNLWRI---------------------------- 3576
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
IR G +++I+QLD IGRTSE AR+FGI+FY VLSR
Sbjct: 3577 ------------------------IRHEGNLKVIDQLDLIGRTSEFARVFGIEFYHVLSR 3612
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
GSQ+RVES+MLRL++ NF+ SPS++QRA MRAPE + L LEPESR Y DP++V+DFQS
Sbjct: 3613 GSQYRVESMMLRLAKPMNFIPASPSVQQRARMRAPECIALTLEPESRFYADPVVVVDFQS 3672
Query: 585 LYPSVIIAYNYCFSTC 600
LYPS++IA+NYCFSTC
Sbjct: 3673 LYPSIMIAHNYCFSTC 3688
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 138
R Y DP++V+DFQSLYPS++IA+NYCFSTC
Sbjct: 3659 RFYADPVVVVDFQSLYPSIMIAHNYCFSTC 3688
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 193 LFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEI 252
L S +++ TP + ID TP + +++ + + + E LTV+++E+
Sbjct: 3282 LMSSADMREMATPTNSKGNQSQIDGPTPKNSFGFKVSQHDFQKAKALHEVQNLTVMSLEL 3341
Query: 253 HAISRALLKPDPAYDEVKAIFYYL---YTCPPEEDRKVGIILIGQESE 297
HA +R L PDP D + A+FY + T ++ G+IL+ ++S+
Sbjct: 3342 HAETRRDLMPDPEVDPILAVFYNILNDVTTDAQQRDITGVILVDKKSK 3389
>gi|444319010|ref|XP_004180162.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
gi|387513204|emb|CCH60643.1| hypothetical protein TBLA_0D01350 [Tetrapisispora blattae CBS 6284]
Length = 1352
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 188/323 (58%), Gaps = 27/323 (8%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEKRN 412
+E +LF ++ V +DPDIL GYEI+ SWGY++ER + L ELSRI K +
Sbjct: 627 SENDLFDALMDLVLLFDPDILSGYEIQNGSWGYVMERCRAIYKYELADELSRI----KAS 682
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
S++ + ++ + GR V N+WR +RHE+ L SYT EN+ Y VL +RIP +S L W
Sbjct: 683 SNKYFKREGEINVVGRYVFNIWRHMRHEIRLTSYTVENVAYEVLGQRIPRYSQDTLNEMW 742
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
++ ++++++R+ ++L+ I R +E ARL GI F V RGSQ++VES
Sbjct: 743 FDKSIRQVATLLKYWVVRLKINVKLLIHFQLIPRITEQARLVGIDFRSVYHRGSQYKVES 802
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+ R+++ NF+ SPS Q +A E +PL++EPES Y P++VLDFQSLYPS+I
Sbjct: 803 FLTRITKNENFLLFSPSRSQVRAQKALECIPLVMEPESSYYQSPVLVLDFQSLYPSIICG 862
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
YNYC+ST L L V ++ +SP+GV FV+ +IR I
Sbjct: 863 YNYCYSTMLDENNRLDV----------------------RSKNVSPNGVEFVNTTIRESI 900
Query: 653 LPKMLQEILDTRLMVKQSMKEYK 675
L +MLQE+L R+MVK + E +
Sbjct: 901 LGRMLQELLACRVMVKSTRNELR 923
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
M P SS Y P++VLDFQSLYPS+I YNYC+ST L L V
Sbjct: 836 MEPESS----YYQSPVLVLDFQSLYPSIICGYNYCYSTMLDENNRLDV 879
>gi|448080488|ref|XP_004194650.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359376072|emb|CCE86654.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1520
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 264/547 (48%), Gaps = 74/547 (13%)
Query: 167 NKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLET-----PKRRICDSYAIDAMTPD 221
N SI E E+++ + S+ ++ + S IR+ L + + YA+ + D
Sbjct: 583 NDSSIQEVEVSYVNFSQKVSVESKIKM-SSLIRRDLFNQSSLKSEDKTLWQYAVPGPSKD 641
Query: 222 TT-------GDYQMGLDNLNEVTSHVENYY--------LTVLAVEIHAISRALLKPDPAY 266
YQ D+L +S + +Y+ L+ L +E+H+ + L P+P
Sbjct: 642 VIISFLNDEKKYQKS-DSLKNRSSMLNSYHDPNKASPTLSNLYLEVHSNTFNDLLPNPLK 700
Query: 267 DEVKAIFYYLYT-----CPPEEDRKVGIILIGQESELPEVRTKPI------QMNFVSNEK 315
D + + Y Y C EE + I SEL R K + ++ +E
Sbjct: 701 DPISMLVYKFYNPSRINCESEECSGLLIYDPENFSELKH-RLKGVSLSASCHLDVFDDEL 759
Query: 316 ELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILI 375
+F +FI + DPD+L G+E+ + SWGYL+ER+ + + ++ + +
Sbjct: 760 SMFDSFISIAVKLDPDLLTGFEVHSSSWGYLIERYNSLVDGNILALLGRCITSSEG---- 815
Query: 376 GYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWR 435
I+ WGY +T + GR +INLWR
Sbjct: 816 ---IQMNRWGY-------------------------------THSTSYKFNGRHMINLWR 841
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
+L+ +++L SYT EN+ +LH+ +P +S K L+ W + +Y R+
Sbjct: 842 VLKSDISLTSYTLENLSQKILHQTLPRYSNKQLSLWLKSCRACNLLFVSNYYFKRIDVGF 901
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+L++ I +TSE ARL GI F+ V++RGSQF+VE+I+LR+S+ N + S S Q
Sbjct: 902 QLLKSRKIISKTSEQARLTGIDFHSVMNRGSQFKVEAILLRISKPMNVLLNSISKTQLNQ 961
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
M+A E +PL++EPES Y P++VLDFQSLYPSV+IAYNYC+ST LG++ +
Sbjct: 962 MKALECIPLVMEPESMFYKSPLLVLDFQSLYPSVMIAYNYCYSTILGKLHGFNPKKNVLG 1021
Query: 616 GCIDLNV--SIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+L V + + Q LTISP+G FV IR IL KML++++ R +K +
Sbjct: 1022 YLKNLEVPEGLVDVLNRQDALTISPNGCVFVKSFIRKSILAKMLEDLISIRSTIKSTAGM 1081
Query: 674 YKFSESL 680
++ S+
Sbjct: 1082 FENENSI 1088
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 29/33 (87%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P++VLDFQSLYPSV+IAYNYC+ST LG++
Sbjct: 978 FYKSPLLVLDFQSLYPSVMIAYNYCYSTILGKL 1010
>gi|448085004|ref|XP_004195746.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
gi|359377168|emb|CCE85551.1| Piso0_005157 [Millerozyma farinosa CBS 7064]
Length = 1524
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 188/332 (56%), Gaps = 29/332 (8%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER------GYVLGLNLNQELSR-IT 406
+E +F FI V + DPD+L GYE+ + SWGYL+ER G +L L L R IT
Sbjct: 761 DELSMFDSFISIVVKLDPDLLTGYEVHSSSWGYLIERYNSLVDGNILAL-----LGRCIT 815
Query: 407 EVEKRNSSR-DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
E +R +T + GR +INLWR+L+ +V+L SY EN+ +LH+ P +S
Sbjct: 816 SSEGIQMNRWGYTHSTSYKFNGRHMINLWRVLKSDVSLTSYALENLSQKILHQTFPRYSN 875
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
K L+ W ++Y R+ L++ I +TSE ARL GI F+ V++RG
Sbjct: 876 KQLSLWLRSSRADNLSFVSDYYFKRIDVGFSLLKSRKIISKTSEQARLTGIDFHSVMNRG 935
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
SQF+VE+I+LR+S+ N + S S Q M+A E +PL++EPES Y P+IVLDFQ L
Sbjct: 936 SQFKVEAILLRISKPMNVLLNSISKTQLNQMKALECIPLVMEPESMFYKSPLIVLDFQCL 995
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDS---------FPFGCIDLNVSIRSLKKLQQNLTI 636
YPSV+IAYNYC+ST LG++ + P G +D+ L K Q LTI
Sbjct: 996 YPSVMIAYNYCYSTILGKLHGFNPKKNVLGYLKNLEIPEGLVDV------LNK-QDALTI 1048
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVK 668
SP+G FV IR IL KML++++ R +K
Sbjct: 1049 SPNGCVFVKSFIRKSILAKMLEDLITIRSTIK 1080
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y P+IVLDFQ LYPSV+IAYNYC+ST LG++
Sbjct: 982 FYKSPLIVLDFQCLYPSVMIAYNYCYSTILGKL 1014
>gi|344231485|gb|EGV63367.1| DNA/RNA polymerase [Candida tenuis ATCC 10573]
Length = 1457
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 239/455 (52%), Gaps = 48/455 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLY---TCPPEEDRKVGIILIGQESELPEV 301
LT +E+H + + P+P DE+ IFY P K GI LI ++S P++
Sbjct: 618 LTNFLMEVHVNTSSTKLPNPQTDEISVIFYKFIDSNAMVPSPILKSGI-LINKKS-FPDI 675
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
++N V + L D LI NE S
Sbjct: 676 S----KLNLVGLRRIL----------GDIQFLI-----------------FDNESSAVSK 704
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSR--ITEVEKRNSSRDEV 418
+E V +DPDIL G+EI ++SWGYL+ER L ++L +LSR I K
Sbjct: 705 LLEVVEYFDPDILSGFEINSMSWGYLVERFQKKLNISLLSQLSRSKINNTGKFGDRWGYT 764
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW--EHRT 476
+ +++ GR +N+WR+LR ++ L +YTFEN Y++ H+ +P + L+ + E +
Sbjct: 765 HTSNIRIVGRYTLNVWRVLRKDLALNNYTFENCCYNIYHQTLPKIENQRLSSFLKGEFKE 824
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
L+ + +Y+ ++ + I LD I + E++RL GI F RGSQF+VESI+ R
Sbjct: 825 QLFGF---SYYVNKLNIVEYFISSLDIIDKNVELSRLVGIDFNSNFYRGSQFKVESILSR 881
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
L++ NF+ SPS + M+ E +PLI+EP S Y P++VLDFQSLYPS++IAYN C
Sbjct: 882 LAKAENFLLNSPSKEHVHQMKPLEQIPLIMEPNSGFYKSPLLVLDFQSLYPSIVIAYNLC 941
Query: 597 FSTCLGRVEHLGVSDSFPFGCID-LNVSIRSLKKLQQN--LTISPSGVAFVDKSIRCGIL 653
+ST L R+ S + P G ++ +N+S + L +N LT++ +G+ FV IR IL
Sbjct: 942 YSTFLCRLHGFKPSKN-PIGYLNHMNLSPMIIDLLHKNDCLTVTSNGLVFVKSKIRKSIL 1000
Query: 654 PKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNS 688
KMLQEIL R+ +K ++ E+ + + + NS
Sbjct: 1001 AKMLQEILTLRINIKSFLQLINQDENPQMVKVFNS 1035
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKD 169
Y P++VLDFQSLYPS++IAYN C+ST L R+ S + P G + N SP D
Sbjct: 917 FYKSPLLVLDFQSLYPSIVIAYNLCYSTFLCRLHGFKPSKN-PIGYL--NHMNLSPMIID 973
Query: 170 SIHEAE 175
+H+ +
Sbjct: 974 LLHKND 979
>gi|449018967|dbj|BAM82369.1| DNA polymerase zeta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1996
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 186/335 (55%), Gaps = 29/335 (8%)
Query: 367 RQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-EVEKRNSSRD--------- 416
R DPDIL+ Y + GYLL+R VLG +L LSR+ V + R
Sbjct: 1181 RHLDPDILVSYSLRDGGIGYLLQRAGVLGYDLASGLSRVALGVHDPKTERQWSLSMHPWE 1240
Query: 417 -EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
+ + +++ GR V+++WR+++ EV L +YTF ++ +L R+P W W+
Sbjct: 1241 TDTASGGIRLLGRYVLDVWRIMQSEVKLSNYTFYRVVEEILGRRMPRLPWSTQRDWFTRG 1300
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
T +E L R + L+E LD +GR++EMA +GI V RGSQ+RVES+M
Sbjct: 1301 TAADCRRALELVLFRAAWTLDLLEALDILGRSAEMATSYGIDLLSVFLRGSQYRVESLMA 1360
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
RL+ +V VSP+ Q A +PL++EPE+R Y+DP++VLDFQSLYPS+IIA+N
Sbjct: 1361 RLAHAQGYVLVSPTAAQVRCQPATAFIPLVMEPEARYYSDPVLVLDFQSLYPSMIIAHNI 1420
Query: 596 CFSTCLGRV----------------EHLGVSDSFPFGCIDL--NVSIRSLKKLQQNLTIS 637
CFSTCLGRV GV +++ I L ++ + ++ LT+
Sbjct: 1421 CFSTCLGRVLLDSESDWCTFASGIPRVFGVLEAYSPDWIGLVEALATDATPDVEALLTVL 1480
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P+ FV +R GILP ML+EIL+TR+M+K M+
Sbjct: 1481 PNQTVFVKPRVRHGILPLMLREILETRMMLKGGME 1515
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
R Y+DP++VLDFQSLYPS+IIA+N CFSTCLGRV
Sbjct: 1396 RYYSDPVLVLDFQSLYPSMIIAHNICFSTCLGRV 1429
>gi|326481837|gb|EGE05847.1| polymerase zeta subunit [Trichophyton equinum CBS 127.97]
Length = 1651
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 236/478 (49%), Gaps = 82/478 (17%)
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFY 274
IDA T ++ + H NY ++V+++E+H +R L P+P DEV +F+
Sbjct: 792 IDASTQHNKHGFKYSQRTKSSAVQHEANY-MSVMSLEVHVNTRGTLAPNPEEDEVACVFW 850
Query: 275 YLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILI 334
+ + EE R G++++ + L + KP +P I
Sbjct: 851 SVIS--EEEVRHHGVVVVSETYGL-SSKLKP-----------------------EPGIEF 884
Query: 335 GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER---G 391
EI +E +L + + VR +DPDIL GYE+ SWGYL+ER G
Sbjct: 885 QEEI---------------SELDLMNRIVGIVRYYDPDILTGYEVHNGSWGYLIERARKG 929
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSY 446
Y +L E SR+ R+ + + +++ GR +IN+WR +R E+NL Y
Sbjct: 930 Y--DYDLCDEFSRVKSQSHGRIGRETDRWGFNHTSTIRITGRHMINIWRAMRGELNLLQY 987
Query: 447 TFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGR 506
T EN+ +H+LH+RIP + ++ LT W++ T++++ RV + +++ + I R
Sbjct: 988 TMENVAFHLLHKRIPHYPFEDLTRWFKSDRPRDVAKTIQYFSSRVDLNLEILDANELISR 1047
Query: 507 TSEMARLFGIQFY-EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLI 565
TSE AR+ +F+ ++ SR A E LPL+
Sbjct: 1048 TSEQARILAGKFHLDIPSRAV---------------------------GQQNALECLPLV 1080
Query: 566 LEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIR 625
+EP+S YT P++VLDFQSLYPS++IAYNYC+ST LGR+ + + G D
Sbjct: 1081 MEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNK--MGITDYEREPG 1138
Query: 626 SLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L L+ + I+P+G+ + + IR +L KML EIL+TR+MVK MKE K L+ L
Sbjct: 1139 LLGLLKDQINIAPNGIIYAKQEIRKSLLAKMLTEILETRVMVKNGMKEDKDDRPLQRL 1196
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 6/46 (13%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV------EHLGVSD 149
YT P++VLDFQSLYPS++IAYNYC+ST LGR+ +G++D
Sbjct: 1087 FYTSPLLVLDFQSLYPSIMIAYNYCYSTNLGRIVNWRGRNKMGITD 1132
>gi|452823373|gb|EME30384.1| DNA polymerase zeta subunit [Galdieria sulphuraria]
Length = 1615
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 203/370 (54%), Gaps = 49/370 (13%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
VSNE+ELF +R +D D++ GY+I S GYL+ERG+ LG + +SR E +
Sbjct: 786 QMVSNEEELFYKVAHWIRYYDIDMIFGYDIHRSSLGYLIERGHHLGWAFTRWISRWKETK 845
Query: 410 KR--------------------------NSSRDEVKNTQL----QMPGRIVINLWRLLRH 439
++SR + +L ++ GR V +W +LR
Sbjct: 846 PNINTWNNDEAVEDEEEESVNQDNCPIPDASRADTYMKRLGCHIKITGRYVFGIWNILRV 905
Query: 440 EVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIE 499
+V L Y +E +L +RIP + +L + + H++ + E+ L + +E
Sbjct: 906 QVKLPYYDYEGASAALLKKRIPAYEPWVLGSFLQKTQHIH--IAYEYCLQKAADNFHFLE 963
Query: 500 QLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAP 559
+LD++ +TSE+AR+FGI F V++RGSQFRVES++ RL+ N ++ +S S +Q A
Sbjct: 964 ELDWVSQTSELARIFGIDFRSVITRGSQFRVESMLARLAHANGYLLLSASREQLLSQPAM 1023
Query: 560 ESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----------HLG 608
E LPL++EP + Y DP+IV+DFQSLYPS+IIA+N CFST G V +G
Sbjct: 1024 ECLPLVMEPVTNFYQDPVIVMDFQSLYPSIIIAHNMCFSTMFGNVRGFSQISHFGSCRMG 1083
Query: 609 VSDSFPFGCI-----DLNVSIRSL-KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILD 662
V +SF + D +S +L ++ + ++P+G FV IR G+LP++LQEIL
Sbjct: 1084 VLESFEPPSLLSVTNDSELSSGALYERYCNDYYVAPNGECFVTSKIRKGMLPRLLQEILS 1143
Query: 663 TRLMVKQSMK 672
TRLM+K SMK
Sbjct: 1144 TRLMIKSSMK 1153
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFG 154
Y DP+IV+DFQSLYPS+IIA+N CFST G V G S FG
Sbjct: 1036 FYQDPVIVMDFQSLYPSIIIAHNMCFSTMFGNVR--GFSQISHFG 1078
>gi|74194069|dbj|BAE36943.1| unnamed protein product [Mus musculus]
Length = 577
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 2/171 (1%)
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
VL+RGSQ+RVES+MLR+++ N++ V+PSI+QR+ MRAP +PLI+EPESR Y++ ++VL
Sbjct: 1 VLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPLCVPLIMEPESRFYSNSVLVL 60
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC L V L +++ ++T+SP+G
Sbjct: 61 DFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQIRHDVTVSPNG 120
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
VAFV S+R G+LP+ML+EIL TRLMVKQSMK YK +L MLN+ L
Sbjct: 121 VAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYKQDRALSR--MLNARQL 169
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNK 168
R Y++ ++VLDFQSLYPS++IAYNYCFSTCLG VE+LG D F FGC + R PP
Sbjct: 51 RFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR----VPP-- 104
Query: 169 DSIHEAEITHPDCSKSSQIDF-NPDLFKSFIRKQL-ETPKRRI-----CDSYAIDAMTPD 221
D ++ +I H + + F P + K + + L E K R+ SY D
Sbjct: 105 DLLY--QIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYKQDRALSR 162
Query: 222 TTGDYQMGLDNLNEVT 237
Q+GL + VT
Sbjct: 163 MLNARQLGLKLIANVT 178
>gi|308497790|ref|XP_003111082.1| hypothetical protein CRE_04525 [Caenorhabditis remanei]
gi|308242962|gb|EFO86914.1| hypothetical protein CRE_04525 [Caenorhabditis remanei]
Length = 1337
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 209/344 (60%), Gaps = 22/344 (6%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
F E E+ ++ V Q+D D+L+GYE LSWGY L R ++G +L+ + ++ E+
Sbjct: 605 FCETELEMLEEVVKYVVQFDVDVLVGYETLCLSWGYFLRRIKIIGTDLSMDRTKPEPFEE 664
Query: 411 RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL-HSWKLLT 469
++E + + + GR+++++W+++R ++ L++Y N + +VL +IP+ + L+
Sbjct: 665 -GQQKNEDEISVVPPKGRLLVSVWKVVRSDLKLRNYDLGNAVANVLRRKIPMIDNCTLMK 723
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
+R+ + V +L++++ + I L+ ++++ + +EMAR++GIQF+EV +RGSQ
Sbjct: 724 RIRGNRSTVRN--DVFLHLLKLSSVNISLLIEMNWFLKNAEMARVYGIQFHEVWTRGSQL 781
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRA----HMRAPESLPLILEPESRLYTDPIIVLDFQS 584
RVES++LRL+ NFVA S + QR M +PE L LILEP+S++Y DP+IVLDFQS
Sbjct: 782 RVESMLLRLAHRMNFVAPSITHLQRNIHLFRMGSPEQLQLILEPQSKVYFDPVIVLDFQS 841
Query: 585 LYPSVIIAYNYCFSTCLGRVEHL-------GVSDSFPFGCIDLNVSIRSLKKL--QQNLT 635
LYPS++IAYNYC+ST LG++ +L + G I S L KL + +T
Sbjct: 842 LYPSMVIAYNYCYSTILGKIANLVQMSNETKNREEIILGAIKYLPSKDDLVKLVAYKEVT 901
Query: 636 ISPSGVAFVDKSIRCGILPKMLQE----ILDTRLMVKQSMKEYK 675
SP FV K R G+LP +L+E IL R+MVK SMK K
Sbjct: 902 ASPLASMFVKKEKREGVLPLLLREVASSILAARIMVKNSMKRIK 945
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 35/39 (89%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
+ ++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L
Sbjct: 826 QSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIANL 864
>gi|123410205|ref|XP_001303643.1| DNA polymerase family B containing protein [Trichomonas vaginalis
G3]
gi|121885038|gb|EAX90713.1| DNA polymerase family B containing protein [Trichomonas vaginalis
G3]
Length = 1174
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 225/436 (51%), Gaps = 67/436 (15%)
Query: 244 YLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
+L VL +E+ SR L P+PA D++ + L +I +E
Sbjct: 381 FLKVLFIEVGCSSRGKLLPNPAMDQIVCACFTL--------------MIDKE-------- 418
Query: 304 KPIQMNFVSNEKELFSTFIENVRQW-DPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
IE V W P+++IG ++E F S+E+EL
Sbjct: 419 -----------------IIEKVTFWVGPNLVIGEKVE-----------FFSSERELLVGV 450
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-NLNQELSRITEVEKRNSSRDEVKNT 421
I + + DPDI++G+ IE S Y+ ER +LG+ + E+SR K + DEV+
Sbjct: 451 INYILKIDPDIIVGWNIERESVFYINERCKILGIKDFYAEVSRTG---KNPHAMDEVRYI 507
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
+ GR+ +NLWR++RH+ L+SYT ++ H L + P ++ W H +
Sbjct: 508 E----GRLTVNLWRVVRHQAALRSYTLASVSDHFLGTKFPDIKQSQISYWL----HSAPF 559
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
V + R T II + ++F+ E++ + G F SRGSQF++ES+++R+S+
Sbjct: 560 RFVSYCRKRATVIISICLAMNFVEYYCELSSIIGADFASTYSRGSQFQIESLLIRVSKRL 619
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
F SP+ + + RAP +LPL++EP S Y+DP++V+DFQSLYPS IIAYN +++ +
Sbjct: 620 GFCLPSPTRFEVSQQRAPMALPLVMEPMSGFYSDPVLVIDFQSLYPSSIIAYNLDYTSIV 679
Query: 602 GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI--SPSGVAFVDKSIRCGILPKMLQE 659
GR E G + V R L++L +N I +P+ V +V K +R G+LP ML +
Sbjct: 680 GRTEDANTGGR--LGVYEHKVPTRVLEELLENGKIINTPNDVLYVTKDVRPGLLPAMLDQ 737
Query: 660 ILDTRLMVKQSMKEYK 675
IL+ R +KQ++K+ K
Sbjct: 738 ILNLRAFIKQTLKKTK 753
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 83 PSPTRKNKSTRSS---FDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
PSPTR S + + M P S Y+DP++V+DFQSLYPS IIAYN +++ +
Sbjct: 624 PSPTRFEVSQQRAPMALPLVMEPMSG----FYSDPVLVIDFQSLYPSSIIAYNLDYTSIV 679
Query: 140 GRVE 143
GR E
Sbjct: 680 GRTE 683
>gi|156056557|ref|XP_001594202.1| hypothetical protein SS1G_04009 [Sclerotinia sclerotiorum 1980]
gi|154701795|gb|EDO01534.1| hypothetical protein SS1G_04009 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1430
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 219/452 (48%), Gaps = 96/452 (21%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEED---RKVGIILIGQESE 297
E Y++V+++E+H +R P+P DEV+ IF+ D + GI+++ ++
Sbjct: 626 EAQYMSVMSLEVHVNTRGSFVPNPEEDEVQCIFFCFQADDEGTDGSPSQPGIVILSADNN 685
Query: 298 LPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKE 357
R VSN+ + +E+ H S+E +
Sbjct: 686 NISER--------VSNQ-------------------VPFEV-----------HAESSELD 707
Query: 358 LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV-LGLNLNQELSRITEVEKRNSSRD 416
L + VR++DPDIL G+E+ SWGYL+ER V +L E SR+ +D
Sbjct: 708 LLIRMVGIVREYDPDILTGFEVHGGSWGYLIERARVKYDYDLCDEFSRMKAQSHGRFGKD 767
Query: 417 EVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
K + +++ GR +IN+WR +R E+NL YT EN+ +H+L+ RIP ++W L W
Sbjct: 768 NDKWGFNNTSTIRVTGRHMINIWRAMRAELNLLQYTLENVAFHLLYRRIPHYTWADLRTW 827
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ + + + HY+ RV + ++EQ + I RTSE ARL G+ F+ V SRGSQF+VE
Sbjct: 828 YTNGSARDLSKVLTHYVSRVQLDLEILEQNELISRTSEQARLLGVDFFSVFSRGSQFKVE 887
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S+M R+++ NF+ +SPS KQ A E LPL++EP+ D
Sbjct: 888 SLMFRIAKPENFMLISPSRKQVGGQNALECLPLVMEPQKYTRED---------------- 931
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
R L+ L+ ++ I+P+G+ + +IR
Sbjct: 932 ---------------------------------RLLELLKDHINIAPNGMMYAKPNIRKS 958
Query: 652 ILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+L KML EIL+TR+MVK MK K ++L+ L
Sbjct: 959 LLAKMLGEILETRVMVKSGMKLDKEDKALQRL 990
>gi|86563326|ref|NP_498248.2| Protein Y37B11A.2 [Caenorhabditis elegans]
gi|351065547|emb|CCD61513.1| Protein Y37B11A.2 [Caenorhabditis elegans]
Length = 1133
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 191/317 (60%), Gaps = 10/317 (3%)
Query: 368 QWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPG 427
Q+D D++IGYE LSWG+ R +LG ++ + + I E + D+ + T G
Sbjct: 426 QYDVDVMIGYETIRLSWGFFFRRIKLLGSRISMDRALIDAYED-HIEVDDQEITVAPPKG 484
Query: 428 RIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHY 487
R+++++W+++R ++ L++Y + + +VL ++IP+ L + + H
Sbjct: 485 RLLVSVWKVVRSDLALRNYDLGSAVANVLRKKIPMLDNAALMRRIKGERSAIRNDVHLHL 544
Query: 488 LIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVS 547
L + I L+ ++++ + +EMAR++GIQF+EV +RGSQ RVES++LRL+ NFVA S
Sbjct: 545 LKLSSLNISLLTEMNWFLKNAEMARVYGIQFHEVWTRGSQLRVESMLLRLAHRMNFVAPS 604
Query: 548 PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 607
+ QR M +PE L LILEP+S++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L
Sbjct: 605 ITHLQRNMMGSPEQLQLILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIGNL 664
Query: 608 -------GVSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQ 658
+ G I + S + KL + + SP FV KS R G++P +L+
Sbjct: 665 VQMNDESRNREEIVLGAIKYHPSKDDIVKLVAYKEVCASPLASMFVKKSKREGVMPLLLR 724
Query: 659 EILDTRLMVKQSMKEYK 675
EIL R+MVK +MK K
Sbjct: 725 EILAARIMVKSAMKRTK 741
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 34/37 (91%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L
Sbjct: 628 KVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIGNL 664
>gi|344301399|gb|EGW31711.1| DNA polymerase zeta [Spathaspora passalidarum NRRL Y-27907]
Length = 1519
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 226/446 (50%), Gaps = 78/446 (17%)
Query: 245 LTVLAVEIHAIS-RALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRT 303
LT ++EIHA + L DP D + +FY +D+ S + T
Sbjct: 686 LTCFSMEIHADPPNSKLTVDPLRDPISIVFYSF------DDKNGMFNHFEYTSGILIFNT 739
Query: 304 KPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
+ F+S +L S+ +N+ +D +E E+ + +
Sbjct: 740 RKYSEQFIS---QLSSSLKKNIELFD------------------------DEVEMTARLV 772
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEKRNSSRDE----V 418
+ + +DPDIL GYEI +SWGY++ER V +N+ + SR ++ K N +
Sbjct: 773 QLIEIFDPDILAGYEINAMSWGYIIERLRNVFDINILADFSRGSD--KSNGKFGDRWGYT 830
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
+ +++ GR + N+WRLLR +++L SY+ EN+ YH+LH +P +S L+ W T
Sbjct: 831 HTSNIEINGRHMFNVWRLLRSDLSLTSYSLENVSYHLLHRSLPRYSNYQLSQWLSTGTFS 890
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ + +Y R+ +I++IE + I R E +RL GI+F RGSQF+VESI+ RL+
Sbjct: 891 NVLVALSYYSTRIDMVIKIIEVQELITRNVEHSRLIGIEFNANFYRGSQFKVESILARLT 950
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ + + SPS +Q++ P++VLDFQSLYPS++IAYNYC+S
Sbjct: 951 KSESLLLNSPSKQQKS---------------------PLVVLDFQSLYPSIMIAYNYCYS 989
Query: 599 TCLGRVEH-------LGVSDSF--PFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIR 649
T LG++ + +G D+ P G IDL LKK + ISP+G FV ++R
Sbjct: 990 TLLGKLNNFSPNMNDIGYLDNLKIPPGMIDL------LKK-DNAINISPNGFIFVKSNVR 1042
Query: 650 CGILPKMLQEILDTRLMVKQSMKEYK 675
IL KML+E L R+ VK K ++
Sbjct: 1043 KSILAKMLEEFLALRIKVKAVTKSFR 1068
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 29/32 (90%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
P++VLDFQSLYPS++IAYNYC+ST LG++ +
Sbjct: 967 PLVVLDFQSLYPSIMIAYNYCYSTLLGKLNNF 998
>gi|385301007|gb|EIF45240.1| dna polymerase zeta subunit [Dekkera bruxellensis AWRI1499]
Length = 865
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 202/380 (53%), Gaps = 52/380 (13%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
L L +E+H + L+PDPA D + AIF+ +S P
Sbjct: 494 LITLIMELHINTXKDLQPDPAKDXIGAIFWNF-----------------DKSHNPYPLNL 536
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLER--HFVSNEKELFSIF 362
P F+ N D D WG +L E+E+ S
Sbjct: 537 PXAGIFL---------LRNNTXHMDID-----------WGNILNIPIRIFDEEEEMISSL 576
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLER-GYVLGLNLNQELSRITEVEKRNSSRDEVKNT 421
+ V DPDIL GYEI SWGYL+ER V ++L LSR+ + ++RN D T
Sbjct: 577 VGLVELVDPDILSGYEIHAASWGYLIERCKIVYDIDLTIRLSRVCQ-KQRNKXXDRWGYT 635
Query: 422 Q---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHL 478
+++ GR ++N+WR LR E NL SY+ EN+ + VL RIP +S + LT W+ +
Sbjct: 636 HASAIRITGRHMLNIWRQLRREXNLGSYSVENVTFQVLGRRIPHYSTETLTQWFTNNNPN 695
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ +Y R+ +IE+L+ I + +E +RL GI FY V+ RGSQ++VES+++RL+
Sbjct: 696 SLSSLIWYYYHRIIIEGEIIEKLEIIEKITEQSRLLGIDFYSVIYRGSQYKVESLLVRLA 755
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
+ +++ +SPS KQ + + E +PL+LEPES LY P++VLDFQSLYPS+IIAYNYCFS
Sbjct: 756 KAEDYILISPSKKQVFNQDSLECIPLVLEPESALYRSPLVVLDFQSLYPSIIIAYNYCFS 815
Query: 599 TCL--------GRVEHLGVS 610
T L GR + LGV+
Sbjct: 816 TLLGKMRDYKPGRYQKLGVT 835
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 8/47 (17%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--------GRVEHLGVS 148
LY P++VLDFQSLYPS+IIAYNYCFST L GR + LGV+
Sbjct: 789 LYRSPLVVLDFQSLYPSIIIAYNYCFSTLLGKMRDYKPGRYQKLGVT 835
>gi|145477337|ref|XP_001424691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391757|emb|CAK57293.1| unnamed protein product [Paramecium tetraurelia]
Length = 1544
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 245/471 (52%), Gaps = 51/471 (10%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVR-- 302
L ++ EI + + L PDP DE+ I + Y + +I+ +E+ L V
Sbjct: 656 LVLMIFEIFSYKDSKLLPDPEKDEISFIILHSYNVKSSKIMNKMLIIQNEENYLKAVNGY 715
Query: 303 ----TKPIQMNFV--SNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEK 356
P++ V NE L F V DPD + GY++ET S ++V+N
Sbjct: 716 FERMNAPVEYTIVLTQNEINLMKAFTLIVHLIDPDFISGYDLETRSL------YYVANRA 769
Query: 357 ELFSI-FIENVRQWDP--DILIG-YEIETL--SWGYLLERGYVLGLNLNQELSRITEVEK 410
E F+ + + P D LI ++I+ + ++G L ++ + R T +K
Sbjct: 770 EFIGYDFLTEISRGQPTYDKLIEIFDIDEILFNFGQPQPINEKLQKYMDYRMQRPTASKK 829
Query: 411 RNSSRD--------EVKNTQLQ-----------MPGRIVINLWRLLRHEVNLQSYTFENI 451
++ ++D + K Q+ + GR++IN+WR + ++ + Y+ EN+
Sbjct: 830 QSFNQDAKTKSYNSKGKLNQINSRRKKLRFITFVVGRVLINVWRNVATDIKIIDYSIENV 889
Query: 452 MYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
+ + ++ L + L+ W++ T ++ ++Y R+ ++E + I RT E+A
Sbjct: 890 YFQMFKQKNALIHNQTLSQWFKSET----FLVFQYYAKRINMTFDILEMIGLIPRTIEIA 945
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESR 571
+LFG ++ V RGSQF++ESI+ R+++LN+++ +S + Q + + E +PL++EP
Sbjct: 946 KLFGCEYESVGFRGSQFKIESILNRVTKLNDYLLLSATRVQVSTQKILECMPLVVEPPKI 1005
Query: 572 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-EHLGVSDSFPFGCIDLNVSIRSL--- 627
DP+IVLDFQSLYPS++IAYN CFSTCLG + E FG + ++ SL
Sbjct: 1006 FTVDPLIVLDFQSLYPSIMIAYNLCFSTCLGSIKEEFQEGGKKRFGVVATDIDFESLLQK 1065
Query: 628 ----KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
++L +++ I+P+ VAF+ K +R GI+P++L E L TR+M+K+S Y
Sbjct: 1066 YQNQEELMKHILITPNNVAFLTKDVRVGIIPQILNEFLMTRIMIKKSTSLY 1116
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 70 ESSLERSMKPDDRP--SPTRKNKSTRSSFDSDMFPSSSSRDRLYT-DPIIVLDFQSLYPS 126
ES L R K +D S TR ST+ + P +++T DP+IVLDFQSLYPS
Sbjct: 965 ESILNRVTKLNDYLLLSATRVQVSTQKILEC--MPLVVEPPKIFTVDPLIVLDFQSLYPS 1022
Query: 127 VIIAYNYCFSTCLGRV-EHLGVSDSFPFGCIAS 158
++IAYN CFSTCLG + E FG +A+
Sbjct: 1023 IMIAYNLCFSTCLGSIKEEFQEGGKKRFGVVAT 1055
>gi|118369112|ref|XP_001017761.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89299528|gb|EAR97516.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1907
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 167/272 (61%), Gaps = 16/272 (5%)
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEH 486
GRI+ N+WRL R ++ L ++ EN+ Y + R P++S LT W+ + +K + ++
Sbjct: 1230 GRIIWNIWRLCRDKLKLTNFDAENVYYELFQIRNPVYSNWTLTKWFNSESAKHKTLVFDY 1289
Query: 487 YLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAV 546
Y ++ ++++LD I RT+ ARL+G F +++RGSQFRVE +++R+++ ++ +
Sbjct: 1290 YFNKLKINQIVLDKLDIIQRTTSSARLYGCDFESIITRGSQFRVEGVLVRVTKQYGYLML 1349
Query: 547 SPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 606
S S Q A + E +PL++EP L+ DP+IV+DFQSLYPSV+IAYNYC+STCLG +
Sbjct: 1350 SASRMQVASQKILECMPLVMEPPKMLFVDPVIVMDFQSLYPSVMIAYNYCYSTCLGNINE 1409
Query: 607 ---------LGVSDSFP------FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
LGV+ FG D + + + + Q++ I+P+ VA+V K+IR G
Sbjct: 1410 QFNNGGSGRLGVNQDAHLKFEQLFGK-DRKFNPKDMDQYHQDIFIAPNKVAYVRKTIREG 1468
Query: 652 ILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
ILP++L E L TR+M+K+S YK + L L
Sbjct: 1469 ILPQILHEFLLTRIMIKKSAGFYKDDKYLSKL 1500
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH---------LGVSDS--FPFGCIAS 158
L+ DP+IV+DFQSLYPSV+IAYNYC+STCLG + LGV+ F +
Sbjct: 1375 LFVDPVIVMDFQSLYPSVMIAYNYCYSTCLGNINEQFNNGGSGRLGVNQDAHLKFEQLFG 1434
Query: 159 RESNQSPPNKDSIHEAEITHPD 180
++ +P + D H+ P+
Sbjct: 1435 KDRKFNPKDMDQYHQDIFIAPN 1456
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 201 QLETPKR--RICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYY---LTVLAVEIHAI 255
Q +TP++ R+ D + I ++P ++LN+ S ++N + +T++ VEI A
Sbjct: 785 QNQTPQQPSRLTDEFNI--ISPFKDKSPIKTRNSLNQ-KSPIQNKFVGDITLMLVEIFAR 841
Query: 256 SRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMNFVSNEK 315
S P+PA D V A+F+ +Y + V E + + ++ V NE+
Sbjct: 842 SSPHKLPNPATDSVDALFFSIYNGKFD----VSPRYFNSEEQKAKTNENISEIIVVENEE 897
Query: 316 ELFSTFIENVRQWDPDILIGYEIETFSWGYLLER 349
+L FI ++ DPDI G+++E S YL +R
Sbjct: 898 DLIQVFIIITQKIDPDIFGGWDMEKSSLNYLGQR 931
>gi|340507728|gb|EGR33649.1| hypothetical protein IMG5_047210 [Ichthyophthirius multifiliis]
Length = 1612
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 170/283 (60%), Gaps = 19/283 (6%)
Query: 417 EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRT 476
+ +N + GR+++N WR+ + E +Y +N+ Y + + P+ S L+ W+ +
Sbjct: 898 KTQNDNTNIKGRMILNTWRVAKEEFKFTNYDLQNVYYELFGIKNPVFSNSKLSFWFNMQE 957
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
K + + ++L RV I +++E++D I RT+ ARL+G F +L+RG+QF VE ++ R
Sbjct: 958 ---KSIVLNYFLNRVQCIQQILEKMDTIQRTTASARLYGCDFESILTRGTQFIVEGVLNR 1014
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD--------------PIIVLDF 582
+ + F+ +S S +Q + + E PL+L+P+ Y + PIIVLDF
Sbjct: 1015 VCKQIGFLLLSASKQQVSAQKILECTPLVLQPQKSFYVEQQQYQYLYIYFFKSPIIVLDF 1074
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP-FGCI-DLNVSIRSLKKLQQNLTISPSG 640
QSLYPS+IIAYNYC+STCLG + L + G I + + + SLK++++ L ISP+
Sbjct: 1075 QSLYPSIIIAYNYCYSTCLGNINELYTEEGKKRLGVIRNYDFQLNSLKQIEEKLFISPNE 1134
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
VAFV KS+R G+LP++L E L +R+M+K+S K YK +E + L
Sbjct: 1135 VAFVKKSVRQGVLPQILHEFLLSRIMIKESAKYYKKNEYISKL 1177
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
+ PIIVLDFQSLYPS+IIAYNYC+STCLG + L
Sbjct: 1064 FFKSPIIVLDFQSLYPSIIIAYNYCYSTCLGNINEL 1099
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR 404
V +E +L + I V++ DPDIL G++ E S GY+++R LG+ ++ LSR
Sbjct: 751 VRSETDLIKLLILIVQKIDPDILCGWDTEQQSLGYIIQRCETLGIQISDYLSR 803
>gi|320592419|gb|EFX04849.1| DNA polymerase zeta catalytic [Grosmannia clavigera kw1407]
Length = 2153
Score = 195 bits (495), Expect = 9e-47, Method: Composition-based stats.
Identities = 143/476 (30%), Positives = 222/476 (46%), Gaps = 94/476 (19%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTK 304
+ VL +E+HA SR P+P D V+ +F+ + E DR
Sbjct: 671 MRVLVLELHANSRGTFLPNPERDPVQCVFWRV----SETDR------------------- 707
Query: 305 PIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIE 364
+ +++ S I R L+ YE ++E++L +E
Sbjct: 708 -------ATDRDAESGVITVQR------LLRYEKRV---------EVATDERDLLKRVVE 745
Query: 365 NVRQWDPDILIGYEIETLSWGYLLERGYVLGLN---LNQELSRITEVEKRNSSRDEVKNT 421
R+ DPDIL GYE SWGYL ER + L Q L RI + R S+ E +
Sbjct: 746 LARRLDPDILAGYETTASSWGYLAERAALYTETEDGLWQALGRIQQ--PRESAMFERGDQ 803
Query: 422 QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
+ GR V+ + +R + +L+ YT + + +L R+P + ++LT W
Sbjct: 804 SHMVTGRHVLGIATAVRTDADLRQYTIASAAWKLLRLRVPTYGPRVLTGWATSGRARDLT 863
Query: 482 MTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLN 541
V R L++ +F+ RTSE AR+ G+ F VL RGSQ++VES+MLR+++
Sbjct: 864 RLVRFGCHRAAVGAALLQVTEFVARTSEQARVLGVDFASVLGRGSQYKVESVMLRVAKPE 923
Query: 542 NFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
FV SPS +Q H +A E PL+LEP S Y+ P+IVLDF SLYPS++IAYN C+ST L
Sbjct: 924 CFVLPSPSREQVGHQKAAEVAPLVLEPRSGFYSSPVIVLDFASLYPSLMIAYNLCYSTFL 983
Query: 602 GRVEHL---------------------GVSDSFPF-GCIDLNVS----IRSLKKLQQNLT 635
G ++ L G +++ P G + V+ I++ ++ T
Sbjct: 984 GSLDPLYDERPRQKRDVKPHETDLNSSGSAENEPAEGAVTTTVADTDNIKASTSIKMGFT 1043
Query: 636 ------------------ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++P+G+ + S R +L +ML E+L TR+MV+ +M E
Sbjct: 1044 TYERPDGLLESANRLGVVVAPTGMLYAGASTRQSLLARMLAELLRTRVMVRAAMGE 1099
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 70 ESSLERSMKPD--DRPSPTRKNKSTRSSFDSDMFPSS-SSRDRLYTDPIIVLDFQSLYPS 126
ES + R KP+ PSP+R+ + + +++ P R Y+ P+IVLDF SLYPS
Sbjct: 913 ESVMLRVAKPECFVLPSPSREQVGHQKA--AEVAPLVLEPRSGFYSSPVIVLDFASLYPS 970
Query: 127 VIIAYNYCFSTCLGRVEHL 145
++IAYN C+ST LG ++ L
Sbjct: 971 LMIAYNLCYSTFLGSLDPL 989
>gi|426198033|gb|EKV47959.1| hypothetical protein AGABI2DRAFT_116764 [Agaricus bisporus var.
bisporus H97]
Length = 675
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 153/237 (64%), Gaps = 3/237 (1%)
Query: 402 LSRITEVEKRNSSR-DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
LSR ++ ++ R D + +++ GR V+N+WR++R E+ L SYT N+ +HV+ +R+
Sbjct: 410 LSRAPPLKAGSNDRWDGQTTSNIKVAGRHVLNVWRIMRSELALTSYTLSNVAFHVMRQRV 469
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
P +S+ L+ W++ + + + + R ++++E+ + + +T+E AR+FG+ F+
Sbjct: 470 PFYSFATLSRWYDSTGPSHVVALMRYLIQRNCATLQILEETELVTKTAEFARIFGVNFHS 529
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
V+S GSQF+VES M R+++ NFV +SPS A E +PLI+EP S YT P+++L
Sbjct: 530 VISCGSQFKVESFMFRIAKSENFVLLSPSKSDVGLQNAAECMPLIMEPMSAFYTSPLVIL 589
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
DFQS YPSV+IAYNYC+S+CLGR++ ++ FG +L++ L LQ+++T S
Sbjct: 590 DFQSPYPSVMIAYNYCYSSCLGRIKPF--QGNYKFGVTNLDLGPGILDALQEHITGS 644
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
YT P+++LDFQS YPSV+IAYNYC+S+CLGR++
Sbjct: 581 FYTSPLVILDFQSPYPSVMIAYNYCYSSCLGRIK 614
>gi|240275145|gb|EER38660.1| polymerase zeta subunit [Ajellomyces capsulatus H143]
Length = 1503
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 132/200 (66%), Gaps = 2/200 (1%)
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+ ++L RV +++IE + I RTSE AR+ GI F+ V SRGSQF+VES+M R+++ NF
Sbjct: 932 INYFLSRVQLDLKIIESNELISRTSEQARILGIDFFSVFSRGSQFKVESLMFRIAKPENF 991
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+ +SP KQ A E LPL++EP+S YT P++VLDFQSLYPS++IAYNYC+STCLGR
Sbjct: 992 ILISPGKKQVGQQNALECLPLVMEPQSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGR 1051
Query: 604 VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDT 663
V + G ID L+ L+ + I+P+G+ + + +R +L KML EIL+T
Sbjct: 1052 V--VSWRGQNKLGFIDFRRPAGLLELLKDQINIAPNGIIYAKQEVRKSLLAKMLIEILET 1109
Query: 664 RLMVKQSMKEYKFSESLRNL 683
R+MVK MK K + L+ L
Sbjct: 1110 RVMVKGGMKADKDDKHLQRL 1129
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 241 ENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE---EDRKVGI---ILIGQ 294
E Y++V+++E+H +R L P+P DE+ +F+ + E +D GI I+
Sbjct: 792 EAQYMSVMSLEVHVNTRGTLVPNPEEDEISCVFWCVQDGETEINDDDDSAGITAGIIALS 851
Query: 295 ESELPEVRTKPIQMNFVSNEK---ELFSTFIENVRQWDPDILIGYEIETFSWGYLLER 349
E+E R P ++ E +L + ++ VRQ DPDIL GYE+ SWGYL+ER
Sbjct: 852 ENESLAARISPTMVSEFEEEHTELDLLTRLVDVVRQRDPDILTGYEVHNSSWGYLIER 909
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
YT P++VLDFQSLYPS++IAYNYC+STCLGRV
Sbjct: 1020 FYTSPLLVLDFQSLYPSIMIAYNYCYSTCLGRV 1052
>gi|47187286|emb|CAG14131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 138
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 111/129 (86%)
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
+W V+ Y+ RV G ++L++Q D IGRTSE+AR+FGIQF+ VL+RGSQ+RVES+MLRL++
Sbjct: 9 RWKMVDFYVSRVRGTMQLLQQQDIIGRTSELARVFGIQFFHVLTRGSQYRVESMMLRLAK 68
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
N++ V+PS++QRAH RAP+ LPL++EPESR Y++ ++VLDFQSLYPS+IIAYNYC+ST
Sbjct: 69 PLNYIPVTPSVQQRAHQRAPQCLPLVMEPESRFYSNSVVVLDFQSLYPSIIIAYNYCYST 128
Query: 600 CLGRVEHLG 608
CLG V+ LG
Sbjct: 129 CLGHVDSLG 137
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 146
R Y++ ++VLDFQSLYPS+IIAYNYC+STCLG V+ LG
Sbjct: 100 RFYSNSVVVLDFQSLYPSIIIAYNYCYSTCLGHVDSLG 137
>gi|407394210|gb|EKF26847.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 786
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 155/264 (58%), Gaps = 20/264 (7%)
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWM 482
+++PGR+V++L R LR E+ L S T + + + H +P + LT + R+ + +
Sbjct: 16 VRIPGRVVVDLGRQLRKEMKLPSQTLQMVHQKLFHSSLPYFTDAALTEMYTSRSDDMRRV 75
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
+ L R R+ + L F R E +R++GI FYEVLSRGSQ+RVE+ + R+++
Sbjct: 76 ALSVLLTRAVTPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEATLHRMTKPMG 135
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCL 601
+ +SPS ++ H S+PLI++P S Y DPI+VLDF+SLYPS+IIAYN C+STCL
Sbjct: 136 YAMLSPSPEEVRHQPRLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIAYNLCYSTCL 195
Query: 602 GRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQN--------LTISPSGVAFVDKSI 648
GRV LGV S+ V L+ L ++ +T +P+G F+ +
Sbjct: 196 GRVSKHRRGRLGVLTSYK------QVDPLLLRLLAEDDMCSKSNRVTFAPNGCMFLSPEV 249
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP+MLQ +LDTRL V ++K
Sbjct: 250 RKGVLPQMLQALLDTRLEVLAALK 273
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 70 ESSLERSMKPDD----RPSPTRKNKSTR-SSFDSDMFPSSSSRDRLYTDPIIVLDFQSLY 124
E++L R KP PSP R S M P S D DPI+VLDF+SLY
Sbjct: 124 EATLHRMTKPMGYAMLSPSPEEVRHQPRLVSMPLIMQPRS---DFYKDDPIVVLDFRSLY 180
Query: 125 PSVIIAYNYCFSTCLGRVE-----HLGVSDSFPFGCIASRESNQSPPNKDSIHEAEITHP 179
PS+IIAYN C+STCLGRV LGV S+ P + E ++
Sbjct: 181 PSIIIAYNLCYSTCLGRVSKHRRGRLGVLTSY---------KQVDPLLLRLLAEDDM--- 228
Query: 180 DCSKSSQIDFNPD 192
CSKS+++ F P+
Sbjct: 229 -CSKSNRVTFAPN 240
>gi|407867747|gb|EKG08654.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1793
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 152/259 (58%), Gaps = 14/259 (5%)
Query: 425 MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTV 484
+PGR+V++L R LR E+ L S T + + + H +P + LT + R+ + + +
Sbjct: 1025 VPGRVVVDLGRQLRKEMKLPSQTLQMVYQKLFHSSLPYFTDAALTEMYTSRSDDMRRVAL 1084
Query: 485 EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFV 544
L RV R+ + L F R E +R++GI FYEVLSRGSQ+RVE+ + +++ +
Sbjct: 1085 SVLLTRVVTPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEATLHNMTKPMGYA 1144
Query: 545 AVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+SPS ++ H + S+PLI++P S Y DPI+VLDF+SLYPS+IIAYN C+STCLG+
Sbjct: 1145 MLSPSPEEVHHQPSLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIAYNLCYSTCLGK 1204
Query: 604 VE-----HLGVSDSFPFGCIDLNVSIRSLKK-----LQQNLTISPSGVAFVDKSIRCGIL 653
V LGV S+ L +R L + +T +P+G F+ +R G+L
Sbjct: 1205 VSKHRRGRLGVLTSYKQADPLL---LRLLAEDDMCPKSHRVTFAPNGCMFLSPEVRKGVL 1261
Query: 654 PKMLQEILDTRLMVKQSMK 672
P+MLQ +LDTRL V + K
Sbjct: 1262 PQMLQALLDTRLEVLAAFK 1280
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 5/44 (11%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSDSF 151
DPI+VLDF+SLYPS+IIAYN C+STCLG+V LGV S+
Sbjct: 1176 DPIVVLDFRSLYPSIIIAYNLCYSTCLGKVSKHRRGRLGVLTSY 1219
>gi|71652700|ref|XP_815001.1| DNA polymerase zeta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70880023|gb|EAN93150.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1885
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 153/262 (58%), Gaps = 20/262 (7%)
Query: 425 MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTV 484
+PGR+V++L R LR E+ L S T + + + H +P + L + R+ + + +
Sbjct: 1117 VPGRVVVDLGRQLRKEMKLPSQTLQMVYQKLFHSSLPYFTDAALIEMYTSRSDDMRRVAL 1176
Query: 485 EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFV 544
L R R+ + L F R E +R++GI FYEVLSRGSQ+RVE+ + R+++ +
Sbjct: 1177 SVLLTRAVIPHRIAQHLRFYTRVVEFSRMYGILFYEVLSRGSQYRVEATLHRMTKPMGYA 1236
Query: 545 AVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+SPS ++ H + S+PLI++P S Y DPI+VLDF+SLYPS+IIAYN C+STCLG+
Sbjct: 1237 MLSPSPEEVHHQPSLVSMPLIMQPRSDFYKDDPIVVLDFRSLYPSIIIAYNLCYSTCLGK 1296
Query: 604 VE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQN--------LTISPSGVAFVDKSIRC 650
V LGV S+ V L+ L ++ +T +P+G F+ +R
Sbjct: 1297 VSKHRRGRLGVLTSYK------QVDPLLLRLLAEDDMCPKSHRVTFAPNGCMFLSPEVRK 1350
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G+LP+MLQ +LDTRL V ++K
Sbjct: 1351 GVLPQMLQALLDTRLEVLAALK 1372
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 70 ESSLERSMKPDD----RPSPTR-KNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLY 124
E++L R KP PSP ++ + S M P S D DPI+VLDF+SLY
Sbjct: 1223 EATLHRMTKPMGYAMLSPSPEEVHHQPSLVSMPLIMQPRS---DFYKDDPIVVLDFRSLY 1279
Query: 125 PSVIIAYNYCFSTCLGRVE-----HLGVSDSF 151
PS+IIAYN C+STCLG+V LGV S+
Sbjct: 1280 PSIIIAYNLCYSTCLGKVSKHRRGRLGVLTSY 1311
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 172 bits (435), Expect = 8e-40, Method: Composition-based stats.
Identities = 137/499 (27%), Positives = 220/499 (44%), Gaps = 106/499 (21%)
Query: 245 LTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQ---ESELPEV 301
+T+ EI A S + PDP+ D + I + L R GIIL+ + + +V
Sbjct: 863 ITMYTFEIFAKSTPDMLPDPSSDPINFIVFDLENF----KRTQGIILVDEINCHEPIDKV 918
Query: 302 RTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSI 361
R + +F T I NE+EL
Sbjct: 919 R------KYYGFNDSMFKTII----------------------------VTKNEEELLLT 944
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR----------------- 404
FI+ + ++ DI+ G++IE S Y R + LG+++ LSR
Sbjct: 945 FIKQIHIFNVDIITGWDIEKKSLFYFSHRCWQLGIDVMDILSRCPKNSFNILRAFKLADC 1004
Query: 405 -ITEVEKRNSSRD--------------EVKNTQLQ-----------------------MP 426
I E + +S++ +++N +Q +
Sbjct: 1005 LIEEQFQNDSAKGYSQQSMSFDSNQSFKLQNVAMQSIKQSHRSAKQTGFFANFKLNFEIA 1064
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEH 486
GR++IN WRL++H+ L Y E+++ +V ERIP+ S LT + H + E+
Sbjct: 1065 GRMIINTWRLVKHDYKLFCYELESVVNYVFQERIPIFSNWSLTQMYNHEDIKQRVFVFEY 1124
Query: 487 YLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAV 546
+ R+ +I+ + I +E +L+G F + +G QFR+E IM R++ L + +
Sbjct: 1125 MMKRLMKTKDIIDHIQIINTCAEETKLYGFDFQSAICKGHQFRIEHIMNRVTDLLGYKLM 1184
Query: 547 SPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE- 605
S S R E PL LEP Y DP+IVLDF SLYPS++IAYN CFSTCLG ++
Sbjct: 1185 SASRYGVQTQRMLECSPLTLEPPKLFYVDPVIVLDFISLYPSIMIAYNLCFSTCLGYIDD 1244
Query: 606 --------HLGVSDSFPFGCID-LNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
LGV + + L + +L +++ ++P+ VAFV KS+R G+L ++
Sbjct: 1245 NFQKGGFKKLGVQKQWDVQFEELLKKHNYDIDELMKDIFVAPNKVAFVKKSVREGVLSQI 1304
Query: 657 LQEILDTRLMVKQSMKEYK 675
E TR +K +M +YK
Sbjct: 1305 THEFFFTRQFIKGNMGKYK 1323
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y DP+IVLDF SLYPS++IAYN CFSTCLG ++
Sbjct: 1210 FYVDPVIVLDFISLYPSIMIAYNLCFSTCLGYID 1243
>gi|156089459|ref|XP_001612136.1| DNA polymerase family B family protein [Babesia bovis]
gi|154799390|gb|EDO08568.1| DNA polymerase family B family protein [Babesia bovis]
Length = 1478
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 203/395 (51%), Gaps = 57/395 (14%)
Query: 351 FVSNEKELFSIFIENVR-QWDPDILIGYEIETLSWGYLLERGYVLGL-NLNQELSRITEV 408
+V +E+EL +EN+ ++DP+I+ GY++ S GY+ R +G+ + + +SR+
Sbjct: 637 YVQSERELIQ-EVENLFIKFDPNIIYGYDVARSSIGYIQHRAAAIGVPDFLERISRVPPK 695
Query: 409 EKRNSS--------------RDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENI 451
+R + + K++ ++ GR++ +L + E+NL + T ENI
Sbjct: 696 HERQITDITTIMTHQNAKLIKGRYKSSSIKPVFCLGRLIFDLADVALRELNLANLTLENI 755
Query: 452 MYHVLHERIPLHSWKLLTCWWEHRTHL---------------------YKWMTVEHYLIR 490
+Y+ +P++S L+ W L + + + + L R
Sbjct: 756 VYNQFDYLMPVYSQYTLSKWLTTSVQLNASNDPSATTESAPKHGSYKPHAYRAIRYMLFR 815
Query: 491 VTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSI 550
++ +++L ++ R + ++L+G+ + RGSQ+ VES++LR ++ ++ SP+
Sbjct: 816 NYAVLATMDKLVYLRRYATFSKLYGLDIKSAIVRGSQYHVESVLLRFTKSYGYLLPSPTQ 875
Query: 551 KQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-EHLGV 609
+Q R ++P++++P+S L+ P+ +LDFQSLY + IAYN C+STCLG + EH
Sbjct: 876 RQVHEQRPSVAIPIVMQPQSGLHLAPVAILDFQSLYSCITIAYNICYSTCLGLLSEHKKN 935
Query: 610 SDSFPFGCIDLNVSIRSLKKLQQNLT-------ISPSGVAFVDKSIRCGILPKMLQEILD 662
S S G + L+ + ++ T I+P+GV FVDK +R GILP ML+ +L
Sbjct: 936 SGSIKLGIMTYYPEEGILEDITEHRTDKGIGVHITPNGVMFVDKRVREGILPMMLKVVLQ 995
Query: 663 TRLMVKQSMKE--------YKFSESLRNLTMLNSM 689
+R +K++MK+ +K L ML+++
Sbjct: 996 SRRKIKEAMKQPDMDAISLHKLDREQHGLKMLSNL 1030
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 83 PSPT-RKNKSTRSSFDSD--MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
PSPT R+ R S M P S L+ P+ +LDFQSLY + IAYN C+STCL
Sbjct: 871 PSPTQRQVHEQRPSVAIPIVMQPQSG----LHLAPVAILDFQSLYSCITIAYNICYSTCL 926
Query: 140 GRV-EHLGVSDSFPFGCIA 157
G + EH S S G +
Sbjct: 927 GLLSEHKKNSGSIKLGIMT 945
>gi|224009706|ref|XP_002293811.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220970483|gb|EED88820.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
Length = 759
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 187/360 (51%), Gaps = 40/360 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQ----------- 400
VS+E+ L V DPD+LI ++ + GYL+ERG LG ++
Sbjct: 8 VSSEEGLLRRIASIVHNLDPDVLISWDTQGSGIGYLVERGVALGKPIDDSNGAGSLSSKC 67
Query: 401 --ELSRITEVEKRNSSRDEVKN-------------------TQLQMPGRIVINLWRLLRH 439
++SR+ + SS DE K+ + GRIV+ W++
Sbjct: 68 KIDMSRLLGRTPKASS-DEDKSGGSGAFELGVEVDWARTGAAAASIVGRIVVCGWKICSE 126
Query: 440 EVNLQSYTFE-NIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLI 498
E + +++ I+ VL++RIP H LLT W+ + +W +EH L + L+
Sbjct: 127 ECKHPNASYQPAIVSTVLNKRIPFHDELLLTRWYSGDNGVQRWRVIEHKLACAISNVLLL 186
Query: 499 EQLDFIGRTSEMARLFGIQFYEVLS--RGSQFRVESIMLRLSRLN-NFVAVSPSIKQRAH 555
+ LD +GR E ARL G++F + L RGSQ++VE ++LR + N + SPS ++
Sbjct: 187 DALDVLGRAGEGARLSGVEFSQSLPGIRGSQYKVEGVLLRALQSNMGYFFYSPSKADCSN 246
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
A E + LEP+S + DP++V DF +LYPS++IAYN C+ST G++++ +
Sbjct: 247 QEALECQAMTLEPKSGFHFDPVVVCDFTALYPSLVIAYNLCYSTVAGKLDYHKRRTAAVL 306
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+V +R+ + + P+G FV +S+ G+LP++L E+L TR M+K++ KEYK
Sbjct: 307 KHHMKSVPVRTKRDRAYAI---PTGSVFVSESVLKGVLPQVLDEMLSTRAMLKKAAKEYK 363
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 84 SPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
SP++ + S + + + + + + DP++V DF +LYPS++IAYN C+ST G+++
Sbjct: 238 SPSKADCSNQEALECQAM-TLEPKSGFHFDPVVVCDFTALYPSLVIAYNLCYSTVAGKLD 296
Query: 144 H 144
+
Sbjct: 297 Y 297
>gi|268572035|ref|XP_002641217.1| Hypothetical protein CBG09081 [Caenorhabditis briggsae]
Length = 544
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 117/175 (66%), Gaps = 9/175 (5%)
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
MAR++GIQF+EV +RGSQ RVES++LRL+ NFVA S + QR M +PE L LILEP+
Sbjct: 1 MARVYGIQFHEVWTRGSQLRVESMLLRLAHRMNFVAPSVTHLQRNMMGSPEQLQLILEPQ 60
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV-------SDSFPFGCIDLNV 622
S++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L + G I +
Sbjct: 61 SKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIANLNAMSNESKNREEIILGAIKYHP 120
Query: 623 SIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
S L KL + + SP FV KS R G+LP +L+EIL R+MVK ++K K
Sbjct: 121 SKNDLVKLVAYKEVCASPLAAMFVKKSKREGVLPLLLREILSARIMVKNAIKRTK 175
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 35/41 (85%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
+ ++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L
Sbjct: 60 QSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKIANLNA 100
>gi|344254015|gb|EGW10119.1| DNA polymerase zeta catalytic subunit [Cricetulus griseus]
Length = 2601
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 168/290 (57%), Gaps = 42/290 (14%)
Query: 202 LETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLK 261
+ TPK+ ++ ID + + T +++ + NL E + E LT+++VE+HA +R L+
Sbjct: 1947 VNTPKK---ETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQ 2003
Query: 262 PDPAYDEVKAIFYYLYTCPP----EEDRKVGIILIGQESELPEVRTKPIQMNFVSNEKEL 317
PDP +D + A+FY + + P E+ G+I+I ++ +
Sbjct: 2004 PDPEFDPICALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTH----------------- 2046
Query: 318 FSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGY 377
+++R P +LI I LE + ++EK LF ++++DPDIL+GY
Sbjct: 2047 -----QDIRYQTP-LLIRSGITG------LEITYAADEKALFQEITNIIKRYDPDILLGY 2094
Query: 378 EIETLSWGYLLERGYVLGLNLNQELSRITE--VEKR-NSSRDEVKN---TQLQMPGRIVI 431
EI+ SWGYLL+R L ++L Q +SR+ + +E R + RD+ + +++ + GRI +
Sbjct: 2095 EIQMHSWGYLLQRAAALSVDLCQMISRVPDDKIENRFAAERDDYGSDTMSEINIVGRITL 2154
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKW 481
NLWR++R+EV L +YTFEN+ +HVLH+R PL ++++L+ W++++T LY++
Sbjct: 2155 NLWRIMRNEVALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRY 2204
>gi|312103963|ref|XP_003150285.1| hypothetical protein LOAG_14745 [Loa loa]
Length = 150
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%)
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
++ + ++H + + ++ +LDF +TSEMARL+GIQF EVL+RGSQFRVES++LRL
Sbjct: 1 MFSILVLKHMKLYCQLNLSILLRLDFFTKTSEMARLYGIQFNEVLTRGSQFRVESMLLRL 60
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+R +VA S S QR M +PE+LPL +EPES Y DP+IVLDFQSLYPS+IIAYNYCF
Sbjct: 61 ARQEKYVAPSISPAQRGAMCSPETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCF 120
Query: 598 STCLGRVEHL 607
+TCLG++ H+
Sbjct: 121 TTCLGKISHV 130
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 74 ERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNY 133
E+ + P P+ R + + M P S Y DP+IVLDFQSLYPS+IIAYNY
Sbjct: 64 EKYVAPSISPA-QRGAMCSPETLPLTMEPESG----FYRDPVIVLDFQSLYPSIIIAYNY 118
Query: 134 CFSTCLGRVEHL 145
CF+TCLG++ H+
Sbjct: 119 CFTTCLGKISHV 130
>gi|342182636|emb|CCC92115.1| putative DNA polymerase zeta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1206
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 31/273 (11%)
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS----WKLLTCWWEHRTHLYKWM 482
GR +I+L + LR + L SYT + + + ++ IP + K+ +C H++
Sbjct: 375 GRFIIDLSKYLRKALQLPSYTLQMVYLKLFNKTIPFFTDIALTKMYSCGDPGTRHVF--- 431
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
+ L RV R+ + L F RTSE AR+FGI F EV++RGSQ+ VE+ + R+++
Sbjct: 432 -LSVLLTRVVAQHRIAQHLQFYSRTSEFARMFGILFNEVVTRGSQYHVEATLYRMAKPMG 490
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCL 601
F +SP +S+PL +EP S Y DP++VLDF+SLYPS++IAYN C++TCL
Sbjct: 491 FTMLSPPASVVHQQPRLQSMPLTMEPRSGFYKDDPVVVLDFRSLYPSIVIAYNICYTTCL 550
Query: 602 GRV-----EHLGV------SDSFPFGCIDLNVSIRSL-----------KKLQQNLTISPS 639
G V LGV DS +D + S + K ++T +P+
Sbjct: 551 GIVGKRNYGRLGVLTSYRQDDSLILSLLDRDESRNAASCTDGDEGDDTSKWSHSVTFAPN 610
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G F+ + R G+LP+ML+ +LDTR+ VK +++
Sbjct: 611 GTMFLTRETREGVLPQMLRVLLDTRVDVKAAIE 643
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 5/44 (11%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVSDSF 151
DP++VLDF+SLYPS++IAYN C++TCLG V LGV S+
Sbjct: 524 DPVVVLDFRSLYPSIVIAYNICYTTCLGIVGKRNYGRLGVLTSY 567
>gi|340055352|emb|CCC49665.1| putative DNA polymerase zeta catalytic subunit, fragment [Trypanosoma
vivax Y486]
Length = 1934
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 151/268 (56%), Gaps = 18/268 (6%)
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
Q+PGR+V++L R LR + L SY+ + + + +P + LT + +R + +
Sbjct: 1174 QIPGRVVVDLSRQLRKTLALPSYSLQMVYQQFFDKSLPYFTDVALTKMFRNRDPGMRHVA 1233
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+ + RV R+ + L F RT+E AR++GI F EVL+RGSQ+RVE+ + R+++ F
Sbjct: 1234 LSTLVTRVVVSHRVTQHLRFFTRTAEYARMYGILFEEVLTRGSQYRVEATLHRIAKPMGF 1293
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
+SP I+ +S+ LI++P S Y DP++VLDF+SLYPS++IAYN C+STCLG
Sbjct: 1294 AMLSPPIEFVHKQPRMQSMALIMQPLSNFYKDDPVVVLDFRSLYPSIVIAYNICYSTCLG 1353
Query: 603 RVE-----HLGVSDSFPFGCIDLNV-------SIRSLKKL-----QQNLTISPSGVAFVD 645
+ LGV +S+ L ++ S K +T +P+G F+
Sbjct: 1354 SIRLHGRGRLGVLNSYRQADSLLLSLLSDDGRNVNSDKGAVSADNSHKVTFTPNGCMFLT 1413
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKE 673
R GI+P ML+ +L TR +++++K+
Sbjct: 1414 PDTREGIMPIMLRALLKTRFEIQEALKQ 1441
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 5/44 (11%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSDSF 151
DP++VLDF+SLYPS++IAYN C+STCLG + LGV +S+
Sbjct: 1326 DPVVVLDFRSLYPSIVIAYNICYSTCLGSIRLHGRGRLGVLNSY 1369
>gi|402581220|gb|EJW75168.1| hypothetical protein WUBG_13924, partial [Wuchereria bancrofti]
Length = 150
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 99/130 (76%)
Query: 478 LYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRL 537
++ + ++H + + ++ +LDF RTSEMARL+GIQF EVL+RGSQFRVES++LRL
Sbjct: 1 MFSILVLKHMKLHCQLNLLILLRLDFFTRTSEMARLYGIQFNEVLTRGSQFRVESMLLRL 60
Query: 538 SRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+R +VA S S QR M +PE+LPL +EPES Y DP+IVLDFQSLYPS+IIAYNYCF
Sbjct: 61 ARREKYVAPSISPAQRQAMCSPETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCF 120
Query: 598 STCLGRVEHL 607
+TC G+V H+
Sbjct: 121 TTCFGKVSHI 130
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 74 ERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNY 133
E+ + P P+ R+ + + M P S Y DP+IVLDFQSLYPS+IIAYNY
Sbjct: 64 EKYVAPSISPA-QRQAMCSPETLPLTMEPESG----FYRDPVIVLDFQSLYPSIIIAYNY 118
Query: 134 CFSTCLGRVEHL 145
CF+TC G+V H+
Sbjct: 119 CFTTCFGKVSHI 130
>gi|339898271|ref|XP_001465833.2| putative DNA polymerase zeta catalytic subunit [Leishmania infantum
JPCM5]
gi|321399485|emb|CAM68262.2| putative DNA polymerase zeta catalytic subunit [Leishmania infantum
JPCM5]
Length = 3085
Score = 153 bits (387), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/264 (36%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH-----SWKLLTCWWEHR 475
T + + GRI +L + LR E+ + SY+ + +L + +P S LT
Sbjct: 2120 TDIHVVGRICTSLGKDLRKEIKMPSYSLTMVHVKLLGQPLPYFTDSYLSELFLTPQCADA 2179
Query: 476 THLYKWMTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ T YL RV R+ +L + R E +R++GI EV++RGSQFRVE+ +
Sbjct: 2180 PGGGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGSQFRVEATL 2239
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAY 593
LR + + +SPS+ Q E +PL+++P+S LY DP++VLDF+SLYPS+IIAY
Sbjct: 2240 LRFAHPLGYAMLSPSLSQVHRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSLYPSLIIAY 2299
Query: 594 NYCFSTCLGRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
N C+STCLG V+ LGV F L + + SP+G FV S
Sbjct: 2300 NLCYSTCLGLVQPHSHGRLGVLPRFRQSNAALAELLPDDGAQHDGVVFSPNGAMFVSPST 2359
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP+M+Q +LDTR V+ ++K
Sbjct: 2360 RVGLLPQMVQAVLDTRFEVQAALK 2383
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 20/104 (19%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSDSFPFGCIASRESNQS--- 164
DP++VLDF+SLYPS+IIAYN C+STCLG V+ LGV F R+SN +
Sbjct: 2281 DPVVVLDFRSLYPSLIIAYNLCYSTCLGLVQPHSHGRLGVLPRF-------RQSNAALAE 2333
Query: 165 -PPNKDSIHEAEITHPD----CSKSSQIDFNPDLFKSFIRKQLE 203
P+ + H+ + P+ S S+++ P + ++ + + E
Sbjct: 2334 LLPDDGAQHDGVVFSPNGAMFVSPSTRVGLLPQMVQAVLDTRFE 2377
>gi|398015726|ref|XP_003861052.1| DNA polymerase zeta catalytic subunit, putative [Leishmania donovani]
gi|322499276|emb|CBZ34349.1| DNA polymerase zeta catalytic subunit, putative [Leishmania donovani]
Length = 3085
Score = 153 bits (386), Expect = 4e-34, Method: Composition-based stats.
Identities = 96/264 (36%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH-----SWKLLTCWWEHR 475
T + + GRI +L + LR E+ + SY+ + +L + +P S LT
Sbjct: 2120 TDIHVVGRICSSLGKDLRKEIKMPSYSLTMVHVKLLGQPLPYFTDSYLSELFLTPQCADA 2179
Query: 476 THLYKWMTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ T YL RV R+ +L + R E +R++GI EV++RGSQFRVE+ +
Sbjct: 2180 PGGGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGSQFRVEATL 2239
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAY 593
LR + + +SPS+ Q E +PL+++P+S LY DP++VLDF+SLYPS+IIAY
Sbjct: 2240 LRFAHPLGYAMLSPSLSQVQRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSLYPSLIIAY 2299
Query: 594 NYCFSTCLGRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
N C+STCLG V+ LGV F L + + SP+G FV S
Sbjct: 2300 NLCYSTCLGLVQPHSHGRLGVLPRFRQSNAALAELLPDDGAQHDGVVFSPNGAMFVSPST 2359
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP+M+Q +LDTR V+ ++K
Sbjct: 2360 RVGLLPQMVQAVLDTRFEVQAALK 2383
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 20/104 (19%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSDSFPFGCIASRESNQS--- 164
DP++VLDF+SLYPS+IIAYN C+STCLG V+ LGV F R+SN +
Sbjct: 2281 DPVVVLDFRSLYPSLIIAYNLCYSTCLGLVQPHSHGRLGVLPRF-------RQSNAALAE 2333
Query: 165 -PPNKDSIHEAEITHPD----CSKSSQIDFNPDLFKSFIRKQLE 203
P+ + H+ + P+ S S+++ P + ++ + + E
Sbjct: 2334 LLPDDGAQHDGVVFSPNGAMFVSPSTRVGLLPQMVQAVLDTRFE 2377
>gi|157869856|ref|XP_001683479.1| putative DNA polymerase zeta catalytic subunit [Leishmania major
strain Friedlin]
gi|68126544|emb|CAJ04879.1| putative DNA polymerase zeta catalytic subunit [Leishmania major
strain Friedlin]
Length = 3096
Score = 152 bits (384), Expect = 7e-34, Method: Composition-based stats.
Identities = 96/264 (36%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH-----SWKLLTCWWEHR 475
T + + GRI +L R LR E+ + SY+ + +L + +P S LT
Sbjct: 2130 TNMHVVGRICTSLGRDLRKEIKMPSYSLSMVHVQLLGQPLPYFTDSYLSELFLTPQCADA 2189
Query: 476 THLYKWMTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ T YL RV R+ +L + R E +R++GI EV++RGSQFRVE+ +
Sbjct: 2190 LGGGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGSQFRVEATL 2249
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAY 593
L + + +SPS+ Q E +PL+++P+S LY DP++VLDF+SLYPS+IIAY
Sbjct: 2250 LHFAHPLRYAMLSPSLSQVHRQPRIECIPLVMQPKSGLYRHDPVVVLDFRSLYPSLIIAY 2309
Query: 594 NYCFSTCLGRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
N C+STCLG V+ LGV F L + + SP+G FV S
Sbjct: 2310 NLCYSTCLGIVQPHSHGRLGVLPRFRQSNAALAELLPDDGTQHDGVVFSPNGAMFVPPST 2369
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP+M+Q +LDTR V+ ++K
Sbjct: 2370 RVGLLPQMVQAVLDTRFEVQAALK 2393
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 20/104 (19%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSDSFPFGCIASRESNQS--- 164
DP++VLDF+SLYPS+IIAYN C+STCLG V+ LGV F R+SN +
Sbjct: 2291 DPVVVLDFRSLYPSLIIAYNLCYSTCLGIVQPHSHGRLGVLPRF-------RQSNAALAE 2343
Query: 165 -PPNKDSIHEAEITHPDCS----KSSQIDFNPDLFKSFIRKQLE 203
P+ + H+ + P+ + S+++ P + ++ + + E
Sbjct: 2344 LLPDDGTQHDGVVFSPNGAMFVPPSTRVGLLPQMVQAVLDTRFE 2387
>gi|261330373|emb|CBH13357.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1958
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 30/275 (10%)
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
Q+ GRI+++L + LR + L S T + + + + +P + LT + + +
Sbjct: 1139 QVAGRIIVDLSKYLRKYLQLPSTTLQMVYKKLFNSSLPFFTDVALTRMYCAGEAGMQRVF 1198
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+ L RV R+ + L F RT+E AR+FGI F EVL+RGSQ+RVE+ + R+++ F
Sbjct: 1199 MSILLTRVVAPHRIAQHLHFFTRTAEFARMFGILFSEVLTRGSQYRVEATLHRMAKPMGF 1258
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
+SP ++ +S+PLI++P S Y DP++VLDF+SLYPS++IAYN C++TCLG
Sbjct: 1259 ALLSPPLEVVHRQPRLQSMPLIMQPRSGFYKDDPVVVLDFRSLYPSIVIAYNICYTTCLG 1318
Query: 603 RV-----EHLGVSDSFP--------------------FGCIDLNVSIRSLKKLQQNLTIS 637
V LGV S+ G D N + +L +T +
Sbjct: 1319 SVGKGVYGRLGVLKSYKRDDMLLSSLLSGLADIKNDHNGKNDDNENSNTL----HGVTFT 1374
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P+G F+ R G+LP+ML+ +LDTR+ ++ ++K
Sbjct: 1375 PNGCMFLTPENREGVLPQMLRVLLDTRVDLQAALK 1409
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 5/44 (11%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVSDSF 151
DP++VLDF+SLYPS++IAYN C++TCLG V LGV S+
Sbjct: 1291 DPVVVLDFRSLYPSIVIAYNICYTTCLGSVGKGVYGRLGVLKSY 1334
>gi|72392719|ref|XP_847160.1| DNA polymerase zeta catalytic subunit [Trypanosoma brucei TREU927]
gi|62359205|gb|AAX79648.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei]
gi|70803190|gb|AAZ13094.1| DNA polymerase zeta catalytic subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1958
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 30/275 (10%)
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMT 483
Q+ GRI+++L + LR + L S T + + + + +P + LT + + +
Sbjct: 1139 QVAGRIIVDLSKYLRKYLQLPSTTLQMVYKKLFNSSLPFFTDVALTRMYCAGEAGMQRVF 1198
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+ L RV R+ + L F RT+E AR+FGI F EVL+RGSQ+RVE+ + R+++ F
Sbjct: 1199 MSILLTRVVAPHRIAQHLHFFTRTAEFARMFGILFSEVLTRGSQYRVEATLHRMAKPMGF 1258
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
+SP ++ +S+PLI++P S Y DP++VLDF+SLYPS++IAYN C++TCLG
Sbjct: 1259 ALLSPPLEVVHRQPRLQSMPLIMQPRSGFYKDDPVVVLDFRSLYPSIVIAYNICYTTCLG 1318
Query: 603 RV-----EHLGVSDSFP--------------------FGCIDLNVSIRSLKKLQQNLTIS 637
V LGV S+ G D N + +L +T +
Sbjct: 1319 SVGKGVYGRLGVLKSYKRDDMLLSSLLSGLADTKNDHNGKNDDNENSNTL----HGVTFT 1374
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P+G F+ R G+LP+ML+ +LDTR+ ++ ++K
Sbjct: 1375 PNGCMFLTPENREGVLPQMLRVLLDTRVDLQAALK 1409
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 5/44 (11%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-----EHLGVSDSF 151
DP++VLDF+SLYPS++IAYN C++TCLG V LGV S+
Sbjct: 1291 DPVVVLDFRSLYPSIVIAYNICYTTCLGSVGKGVYGRLGVLKSY 1334
>gi|401422575|ref|XP_003875775.1| putative DNA polymerase zeta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492014|emb|CBZ27288.1| putative DNA polymerase zeta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 3059
Score = 150 bits (380), Expect = 2e-33, Method: Composition-based stats.
Identities = 95/262 (36%), Positives = 141/262 (53%), Gaps = 12/262 (4%)
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH-----SWKLLTCWWEHRTH 477
+ + GRI +L + LR E+ + SY+ + +L + +P S LT
Sbjct: 2115 MHVVGRICTSLGKDLRKEIKMPSYSLPMVHVKLLGQPLPYFTDSYVSELFLTPQCTDAPG 2174
Query: 478 LYKWMTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
+ T YL RV R+ +L + R E +R++GI EV++RGSQFRVE+ +LR
Sbjct: 2175 GGERHTALRYLASRVAAPHRIACKLRWFTRLLEFSRMYGILTKEVITRGSQFRVEATLLR 2234
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPSVIIAYNY 595
+ + +SPS+ Q E +PL+++P+S LY DP++VLDF+SLYPS+IIAYN
Sbjct: 2235 FAHPLGYAMLSPSLSQVHRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSLYPSIIIAYNL 2294
Query: 596 CFSTCLGRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
C+STCLG V+ LGV F L + + SPSG FV S R
Sbjct: 2295 CYSTCLGIVQPHSHGRLGVLPRFRQSEAALAELLPDDGAQHDGVVFSPSGAMFVPPSTRV 2354
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G+LP+M+Q +LD R V+ ++K
Sbjct: 2355 GLLPQMVQAVLDARFEVQAALK 2376
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 29/31 (93%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
DP++VLDF+SLYPS+IIAYN C+STCLG V+
Sbjct: 2274 DPVVVLDFRSLYPSIIIAYNLCYSTCLGIVQ 2304
>gi|313225135|emb|CBY20928.1| unnamed protein product [Oikopleura dioica]
Length = 673
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 22/347 (6%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV------LGLNLNQELSR 404
F NE +L+ F + DPDI++G+EI S G+L+ R GLNL++
Sbjct: 160 FCKNEIDLYEHFCRIFQSLDPDIILGWEIRRRSLGFLVHRAIKGLGWKKFGLNLSRTFG- 218
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-LH 463
+ S ++ N + GR V+ WRL E++L+S +FE + VL ER P +
Sbjct: 219 ----QNDKSYFEKAMNLNFSIDGRTVLEFWRLAADELSLRSTSFEAAAFEVLGERTPTMK 274
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYL-IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
K+ T W + W V YL R + +I ++ + E+A + + + L
Sbjct: 275 RIKMRTLW-----NSQSWPKVLTYLKSRTDKLASMIRKMGLLEIGYEVAGIANVSVKDAL 329
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q R E I V SP+ + +A E + L LEPES LY + VLDF
Sbjct: 330 TRGCQVRHEGIFGTCCSYLEMVMDSPTEAEVRESKAGEQMALNLEPESGLYKRGVAVLDF 389
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS-GV 641
SLYP+VIIA N C++T +G + + G +N ++ + ++ S S
Sbjct: 390 TSLYPTVIIAQNMCYTTIVGNYKDHQDEEPQNVG-TKMNWTMAHWELPDEDEIHSTSTNC 448
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNS 688
AFV+K R GI+P++ ++L R +K+ MK + S R+L ML+S
Sbjct: 449 AFVNKEKRVGIMPQVQTQLLSKRQAIKKLMKTGEHSS--RDLKMLDS 493
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIAS-RESNQSPPNK 168
LY + VLDF SLYP+VIIA N C++T +G + + G + ++ P++
Sbjct: 379 LYKRGVAVLDFTSLYPTVIIAQNMCYTTIVGNYKDHQDEEPQNVGTKMNWTMAHWELPDE 438
Query: 169 DSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPK 206
D IH +K ++ P + + K+ K
Sbjct: 439 DEIHSTSTNCAFVNKEKRVGIMPQVQTQLLSKRQAIKK 476
>gi|313240134|emb|CBY32486.1| unnamed protein product [Oikopleura dioica]
Length = 922
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 22/347 (6%)
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYV------LGLNLNQELSR 404
F NE +L+ F + DPDI++G+EI S G+L+ R GLNL++
Sbjct: 160 FCKNEIDLYEHFCRIFQSLDPDIILGWEIRRRSLGFLVHRAIKGLGWKKFGLNLSRTFG- 218
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-LH 463
+ S ++ N + GR V+ WRL E++L+S +FE + VL ER P +
Sbjct: 219 ----QNDKSYFEKAMNLNFSIDGRTVLEFWRLAADELSLRSTSFEAAAFEVLGERTPTMK 274
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYL-IRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
K+ T W + W V YL R + +I ++ + E+A + + + L
Sbjct: 275 RIKMRTLW-----NSQSWPKVLTYLKSRTDKLASMIRKMGLLEIGYEVAGIANVSVKDAL 329
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q R E I V SP+ + +A E + L LEPES LY + VLDF
Sbjct: 330 TRGCQVRHEGIFGTCCSYLEMVMDSPTEAEVRESKAGEQIALNLEPESGLYKRGVAVLDF 389
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS-GV 641
SLYP+VIIA N C++T +G + + G +N ++ + ++ S S
Sbjct: 390 TSLYPTVIIAQNMCYTTIVGNYKDHQDEEPQNVG-TKMNWTMAHWELPDEDEIHSTSTNC 448
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNS 688
AFV+K R GI+P++ ++L R +K+ MK + S R+L ML+S
Sbjct: 449 AFVNKEKRVGIMPQVQTQLLSKRQAIKKLMKTGEHSS--RDLKMLDS 493
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIAS-RESNQSPPNK 168
LY + VLDF SLYP+VIIA N C++T +G + + G + ++ P++
Sbjct: 379 LYKRGVAVLDFTSLYPTVIIAQNMCYTTIVGNYKDHQDEEPQNVGTKMNWTMAHWELPDE 438
Query: 169 DSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPK 206
D IH +K ++ P + + K+ K
Sbjct: 439 DEIHSTSTNCAFVNKEKRVGIMPQVQTQLLSKRQAIKK 476
>gi|389601339|ref|XP_001565217.2| putative DNA polymerase zeta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505002|emb|CAM36652.2| putative DNA polymerase zeta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 2981
Score = 145 bits (365), Expect = 1e-31, Method: Composition-based stats.
Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 26/269 (9%)
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW---------- 472
+ + GRI ++L + LR + + SY+ + +L + +P + L+ +
Sbjct: 2021 MHVVGRICMSLGKDLRKYIKMPSYSLPMVHVELLGQPLPYFTDSYLSELFLTPQCTDAPV 2080
Query: 473 --EHRTHLYKWMTVEHYLI-RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
E T L YL RV + R+ +L + + E +R++G+ EV+SRGSQFR
Sbjct: 2081 GGERHTAL-------RYLASRVAALHRIACKLHWFTKLLEFSRMYGVLTKEVISRGSQFR 2133
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT-DPIIVLDFQSLYPS 588
VE+ LRL++ + +SPS+ Q E +PL+++P+S LY DP++VLDF+SLYPS
Sbjct: 2134 VEATFLRLAQPLGYAMLSPSLSQVHRQPRIECIPLVMQPKSDLYRHDPVVVLDFRSLYPS 2193
Query: 589 VIIAYNYCFSTCLGRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
VIIAYN C+STCLG V+ LGV F L + + + +G F
Sbjct: 2194 VIIAYNLCYSTCLGMVQPQSHGRLGVLPRFKQSDATLAELLSDDGAQHDGVVFTLNGAMF 2253
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
V S R G+LP+M++ +LD R V+ ++K
Sbjct: 2254 VPPSTRVGLLPQMMKAVLDARFEVQAALK 2282
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/31 (77%), Positives = 29/31 (93%)
Query: 113 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
DP++VLDF+SLYPSVIIAYN C+STCLG V+
Sbjct: 2180 DPVVVLDFRSLYPSVIIAYNLCYSTCLGMVQ 2210
>gi|401881075|gb|EJT45380.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 564
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
Query: 546 VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 605
V+PS +Q AP ++PLI EPES+ Y PIIVLDFQSLYPSV+IAYN C+STCLGRVE
Sbjct: 2 VTPSKQQVGLQNAPFAVPLIHEPESKYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRVE 61
Query: 606 HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
++ F F +L V L+ L+ LT++P+G+ FV ++R +L KML EILDTR+
Sbjct: 62 QFKGTNKFGF--TELKVPDGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLGEILDTRV 119
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLL 691
MVKQ+MK Y+ ++SL MLN+ L
Sbjct: 120 MVKQAMKGYRDNKSLTQ--MLNARQL 143
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ Y PIIVLDFQSLYPSV+IAYN C+STCLGRVE ++ F F
Sbjct: 27 KYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRVEQFKGTNKFGF 71
>gi|406696979|gb|EKD00249.1| hypothetical protein A1Q2_05426 [Trichosporon asahii var. asahii
CBS 8904]
Length = 564
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
Query: 546 VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 605
V+PS +Q AP ++PLI EPES+ Y PIIVLDFQSLYPSV+IAYN C+STCLGRVE
Sbjct: 2 VTPSKQQVGLQNAPFAVPLIHEPESKYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRVE 61
Query: 606 HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
++ F F +L V L+ L+ LT++P+G+ FV ++R +L KML EILDTR+
Sbjct: 62 QFKGTNKFGF--TELKVPDGLLELLKDYLTVTPNGMIFVKPAVRKSLLAKMLGEILDTRV 119
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLL 691
MVKQ+MK Y+ ++SL MLN+ L
Sbjct: 120 MVKQAMKGYRDNKSLTQ--MLNARQL 143
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 153
+ Y PIIVLDFQSLYPSV+IAYN C+STCLGRVE ++ F F
Sbjct: 27 KYYNHPIIVLDFQSLYPSVMIAYNICYSTCLGRVEQFKGTNKFGF 71
>gi|401401420|ref|XP_003881007.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325115419|emb|CBZ50974.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 3935
Score = 143 bits (360), Expect = 4e-31, Method: Composition-based stats.
Identities = 85/247 (34%), Positives = 133/247 (53%), Gaps = 55/247 (22%)
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+++ L RV + LI+ + + RT+E+ARL+G F+ L+RGSQF+VES+M++ ++ ++
Sbjct: 2917 LKYLLGRVRITLALIDSTELLPRTAELARLYGCDFFSALTRGSQFKVESVMIQATKRLDY 2976
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+ VSPS Q AP +PL+LEP+S Y P++VLDF+SLYPS++IA N C+ST +G
Sbjct: 2977 LFVSPSQSQVTEQPAPLCIPLVLEPKSGFYWSPVLVLDFRSLYPSIVIANNICYSTAMGS 3036
Query: 604 ---------VEHLGVSD-------------------------SFPF-GCIDLN------- 621
V+ LGV D + P GC + +
Sbjct: 3037 VEVDPTVQPVKTLGVMDFHAPPALFQQISGAYYEAASAELRKAAPLRGCQEGDNERQAGR 3096
Query: 622 VSIRSLKKLQQNLTIS-------------PSGVAFVDKSIRCGILPKMLQEILDTRLMVK 668
V R + ++ S PSG FV + +R GI P++L EIL TR+MV+
Sbjct: 3097 VGERGHSQASSDVCTSQAWDADSGGIRLLPSGAMFVSRRVRKGIFPQVLSEILQTRIMVQ 3156
Query: 669 QSMKEYK 675
+++K+YK
Sbjct: 3157 KAIKKYK 3163
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y P++VLDF+SLYPS++IA N C+ST +G VE
Sbjct: 3005 FYWSPVLVLDFRSLYPSIVIANNICYSTAMGSVE 3038
>gi|294947021|ref|XP_002785235.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239898897|gb|EER17031.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 729
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 99/165 (60%), Gaps = 17/165 (10%)
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
VL+RGSQ+RVE I+ R + F VS S Q A E +P++LEP S Y P I+L
Sbjct: 1 VLTRGSQYRVECILHRAASRTGFGLVSSSKAQVKAQPALEGVPMVLEPRSGYYRTPTIIL 60
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKK------LQQNL 634
DFQSLYPS+IIAYN CFSTCLGRVEH DL V++ + + + N+
Sbjct: 61 DFQSLYPSIIIAYNMCFSTCLGRVEHQ-----------DLTVALGTQRDKPYTVTMDDNV 109
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSES 679
++ +G FV S R GILP+ML E+L TR MVK++MK +S
Sbjct: 110 VVAANGAVFVQPSCRVGILPRMLHEVLQTRFMVKRAMKSVNSGDS 154
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
R Y P I+LDFQSLYPS+IIAYN CFSTCLGRVEH
Sbjct: 49 RSGYYRTPTIILDFQSLYPSIIIAYNMCFSTCLGRVEH 86
>gi|324120714|dbj|BAJ78748.1| DNA polymerase delta catalytic subunit [Euconocephalus varius]
Length = 1035
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 191/399 (47%), Gaps = 56/399 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + ++ F+ NV D ++G ++ +FS
Sbjct: 255 GRKGIFPEPNHDPVIQIANMVIQQGQTEPFLRNVFTLDTCAPIVGCQVLSFS-------- 306
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E+E+ + E VR+ DPDI GY I + YL+ R L + L R+ +++
Sbjct: 307 ---KEQEMLEKWSEFVREVDPDIFTGYNINNFDFPYLINRAKHLSVRNFTYLGRVKDIQS 363
Query: 411 ---------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ R E KN ++ GR++ +L +L + L+SYT + YH L E+
Sbjct: 364 VIKEQVLQSKQMGRRENKNINVE--GRVIFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKE 421
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 422 DVHHNIITDLQNGTPQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLAS 479
Query: 521 VLSRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR +R N++ A S +++ + A ++EP+ Y+DPI
Sbjct: 480 LLTRGQQIKVVSQLLRKARERNYLMPAYSAGVQEDQYEGA-----TVIEPKKGYYSDPIA 534
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G E+LG++ T
Sbjct: 535 TLDFSSLYPSIMMAHNLCYTTLLQGGVKENLGLTPD--------------------QYTK 574
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+ FV S+R G+LP++L+ +L R K +KE K
Sbjct: 575 TPASNFFVKGSVRKGLLPEILENLLSARKKAKADLKEEK 613
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y+DPI LDF SLYPS+++A+N C++T L G E+LG++
Sbjct: 529 YSDPIATLDFSSLYPSIMMAHNLCYTTLLQGGVKENLGLT 568
>gi|167390088|ref|XP_001739203.1| DNA polymerase zeta catalytic subunit [Entamoeba dispar SAW760]
gi|165897180|gb|EDR24417.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1384
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 15/265 (5%)
Query: 410 KRNSSRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
K+ S D++ Q + GR+V+N+W + + +Y + I V + +P ++
Sbjct: 706 KQGSFNDKINRLQNGKGVKGRLVLNIWHIYKECSKFSNYETDYIAKQVFNVSLPNVNY-- 763
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
C+ L ++ R + L++ D+I R E A+ + RGSQ
Sbjct: 764 -LCYNASEQLLSSFL-------RFHCCLLLLDYFDYINRIQEFAQFHACPLKGEIERGSQ 815
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
++VE + R+S+ N F SPS Q + RA + + L++EP+S +++P+IVLDF S+YP
Sbjct: 816 YKVECCLKRVSK-NEFKLFSPSDNQLSSSRATDCVALVMEPQSGFHSNPVIVLDFLSMYP 874
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
+ IAYN C+STCLG V+ + + G + + +L L+ N+ + +G+ FV+
Sbjct: 875 TTAIAYNICYSTCLGYVDDINIERK--IGPMTYSFEKENLNTLKGNIHVVANGIMFVNAC 932
Query: 648 IRCGILPKMLQEILDTRLMVKQSMK 672
+R GILP ML+E+L TR +K+ MK
Sbjct: 933 LRKGILPIMLEEMLSTRQHIKEIMK 957
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
+++P+IVLDF S+YP+ IAYN C+STCLG V+ + +
Sbjct: 859 FHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINI 896
>gi|225431691|ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera]
Length = 1089
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 189/404 (46%), Gaps = 65/404 (16%)
Query: 293 GQESELPEVRTKPI--QMNFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ N V+ E + F + ++ P ++G ++ +F
Sbjct: 309 GRKGHFPEPTHDPVIQVANLVTLQGEDQPFVRNVMTLKSCSP--IVGVDVMSFE------ 360
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+E+ + + +R+ DPDI+IGY I YL+ER VLG+ L RI
Sbjct: 361 -----TEREVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERASVLGIAEFPILGRI--- 412
Query: 409 EKRNSSRDEVKNT-------------QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
RNS R VK+T ++ + GR+ +L ++++ + L SY+ ++ H
Sbjct: 413 --RNS-RVRVKDTTFSSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHF 469
Query: 456 LHERIP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
L E+ HS L E R L + + YL + RL+++L FI EMA
Sbjct: 470 LSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMA 524
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESR 571
R+ G+ +LSRG +V S +LR ++ N V P++KQ + +LE +
Sbjct: 525 RVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVL--PNVKQAGSEQGTYEGATVLEANAG 582
Query: 572 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
Y PI LDF SLYPS+++AYN C+ T + P LN+ + K
Sbjct: 583 FYEKPIATLDFASLYPSIMMAYNLCYCTLVT-----------PEDVRKLNLPPECVNK-- 629
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV S++ GILP++L+E+L R K +KE K
Sbjct: 630 -----TPSGEIFVKSSLQKGILPEILEELLAARKRAKADLKEAK 668
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++AYN C+ T
Sbjct: 583 FYEKPIATLDFASLYPSIMMAYNLCYCT 610
>gi|294935971|ref|XP_002781577.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239892423|gb|EER13372.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 369
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
+S E EL Q+DP ++I ++ ++ ER LGL + S V
Sbjct: 115 LSCESELILALDRIFTQFDPTVVISWDASRRGIVFIAERARALGLPGAE--SMFHRVFVP 172
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHE--VNLQSYTFENIMYHVLHERIPLHSWKLLT 469
+T + GRI ++LW+ LR E + L + T +L +P LL
Sbjct: 173 PVPGPLGPST---LYGRITLDLWQTLRQEDSLKLATTTLHGAAKQLLGLTLPRIPMWLLQ 229
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI-QFYEVLSRGSQ 527
WW T + Y +R+ + ++L++ + R SEMA + G+ EVL+RGSQ
Sbjct: 230 EWW---TDASCCIDAFKYTVRLCTLGLQLLDASALLSRASEMASVLGMPDVEEVLTRGSQ 286
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
+RVE I+ R + F VS S Q A E +P++LEP S Y P I+LDFQSLYP
Sbjct: 287 YRVECILHRAASRTGFGLVSSSKAQVKAQPALEGVPMVLEPRSGYYRTPTIILDFQSLYP 346
Query: 588 SVIIAYNYCFSTCLGRVEH 606
S+IIAYN CFSTCLGRVEH
Sbjct: 347 SIIIAYNMCFSTCLGRVEH 365
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
R Y P I+LDFQSLYPS+IIAYN CFSTCLGRVEH
Sbjct: 328 RSGYYRTPTIILDFQSLYPSIIIAYNMCFSTCLGRVEH 365
>gi|224083478|ref|XP_002307042.1| predicted protein [Populus trichocarpa]
gi|222856491|gb|EEE94038.1| predicted protein [Populus trichocarpa]
Length = 1081
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 187/398 (46%), Gaps = 53/398 (13%)
Query: 293 GQESELPEVRTKPI--QMNFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ N V+ E + F I + P ++G ++ +F
Sbjct: 301 GRKGHFPEPTHDPVIQVANLVTLQGEDQPFVRNIMTLNSCSP--IVGVDVMSFD------ 352
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+E+ + E +R+ DPDI+IGY I YL+ER LG++ L RI
Sbjct: 353 -----TEREVLIAWKEFIREVDPDIIIGYNICKFDLPYLIERAATLGISEFPVLGRIRNS 407
Query: 409 EKR-----NSSRD--EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
R SSR ++ ++ + GR+ +L ++++ + L SY+ ++ H L E+
Sbjct: 408 RVRIKDATFSSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKE 467
Query: 462 --LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
HS L E R L + + YL + RL+++L I EMAR+ G+
Sbjct: 468 DVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMLIYNYVEMARVTGVP 522
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+L+RG +V S +LR ++ N V P++KQ + +LEP++ Y PI
Sbjct: 523 LSFLLARGQSIKVLSQLLRKAKEKNLVI--PNVKQAGSEQGKYEGATVLEPKAGFYEKPI 580
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++AYN C+ T + P LN+ + K +
Sbjct: 581 ATLDFASLYPSIMMAYNLCYCTLVT-----------PEDVRKLNLPPECINK-------T 622
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
PSG FV +++ GILP++L+E+L R K +KE K
Sbjct: 623 PSGETFVKSNLQKGILPEILEELLTARKRAKADLKEAK 660
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++AYN C+ T
Sbjct: 575 FYEKPIATLDFASLYPSIMMAYNLCYCT 602
>gi|449707197|gb|EMD46897.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1385
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 168/331 (50%), Gaps = 32/331 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NE LF+ I+ + D D++I + + + ++ ER ++ K+ S
Sbjct: 666 NELSLFNSLIKIINDEDADMIIAEDC-SFTIQFINER---------------YKLYKQGS 709
Query: 414 SRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D++ Q + GR+V+++W + + +Y + I V + +P ++ C+
Sbjct: 710 FNDKINRLQNGKGIKGRLVLDMWHIYKECSKFSNYETDYIAKQVFNVSLPNVNY---LCY 766
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
L ++ R + L++ +I R E A+ + RGSQ++VE
Sbjct: 767 NAPEQLLNSFL-------RFHCCLLLLDYFGYINRIREFAQFHSCPLKGEIERGSQYKVE 819
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
+ R+S+ + F SPS Q RA + + L++EP+S +++P+IVLDF S+YP+ I
Sbjct: 820 CYLKRVSK-SEFKLFSPSDNQLNSSRATDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAI 878
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
AYN C+STCLG V+ + + G + + +L L+ N+ + +G+ FVD +R G
Sbjct: 879 AYNICYSTCLGYVDDINIERK--IGPMTYSFEKENLHTLKGNIHVVANGIMFVDACVRKG 936
Query: 652 ILPKMLQEILDTRLMVKQSMKEY-KFSESLR 681
ILP ML+E+L TR +K+ MK + K SE+ +
Sbjct: 937 ILPIMLEEMLSTRQHIKERMKMFTKGSEAYK 967
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
+++P+IVLDF S+YP+ IAYN C+STCLG V+ + +
Sbjct: 859 FHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINI 896
>gi|67482945|ref|XP_656768.1| DNA polymerase zeta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473989|gb|EAL51383.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1385
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 168/331 (50%), Gaps = 32/331 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NE LF+ I+ + D D++I + + + ++ ER ++ K+ S
Sbjct: 666 NELSLFNSLIKIINDEDADMIIAEDC-SFTIQFINER---------------YKLYKQGS 709
Query: 414 SRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D++ Q + GR+V+++W + + +Y + I V + +P ++ C+
Sbjct: 710 FNDKINRLQNGKGIKGRLVLDMWHIYKECSKFSNYETDYIAKQVFNVSLPNVNY---LCY 766
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
L ++ R + L++ +I R E A+ + RGSQ++VE
Sbjct: 767 NAPEQLLNSFL-------RFHCCLLLLDYFGYINRIREFAQFHSCPLKGEIERGSQYKVE 819
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
+ R+S+ + F SPS Q RA + + L++EP+S +++P+IVLDF S+YP+ I
Sbjct: 820 CYLKRVSK-SEFKLFSPSDNQLNSSRATDCVALVMEPQSGFHSNPVIVLDFLSMYPTTAI 878
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
AYN C+STCLG V+ + + G + + +L L+ N+ + +G+ FVD +R G
Sbjct: 879 AYNICYSTCLGYVDDINIERK--IGPMTYSFEKENLHTLKGNIHVVANGIMFVDACVRKG 936
Query: 652 ILPKMLQEILDTRLMVKQSMKEY-KFSESLR 681
ILP ML+E+L TR +K+ MK + K SE+ +
Sbjct: 937 ILPIMLEEMLSTRQHIKERMKMFTKGSEAYK 967
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
+++P+IVLDF S+YP+ IAYN C+STCLG V+ + +
Sbjct: 859 FHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDINI 896
>gi|407039462|gb|EKE39667.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba nuttalli
P19]
Length = 1385
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 146/275 (53%), Gaps = 16/275 (5%)
Query: 410 KRNSSRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
K+ S D++ Q + GR+V+++W + + +Y + I V + +P ++
Sbjct: 706 KQGSFNDKINRLQNGKGIKGRLVLDIWHIYKECSKFSNYETDYIAKQVFNVSLPNVNY-- 763
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
C+ L ++ R + L++ +I R E A+ + RGSQ
Sbjct: 764 -LCYNAPEQLLSSFL-------RFHCCLLLLDYFGYINRIQEFAQFHACPLKGEIERGSQ 815
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
++VE + R+S+ + F SPS Q RA + + L++EP+S +++P+IVLDF S+YP
Sbjct: 816 YKVECCLKRVSK-SEFKLFSPSDNQLNSSRATDCVALVMEPQSGFHSNPVIVLDFLSMYP 874
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
+ IAYN C+STCLG V+ +S G + + +L L+ N+ + +G+ FVD
Sbjct: 875 TTAIAYNICYSTCLGYVD--DISTERKIGPMTYSFEKENLNTLKGNIHVVANGIMFVDAC 932
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEY-KFSESLR 681
+R GILP ML+E+L TR +K+ MK + K SE+ +
Sbjct: 933 VRKGILPIMLEEMLSTRQHIKERMKMFTKGSEAYK 967
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
+++P+IVLDF S+YP+ IAYN C+STCLG V+ +
Sbjct: 859 FHSNPVIVLDFLSMYPTTAIAYNICYSTCLGYVDDIST 896
>gi|324120698|dbj|BAJ78740.1| DNA polymerase delta catalytic subunit [Mnais pruinosa pruinosa]
Length = 1095
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 35/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--- 410
+E+E+ + + VR+ DPDI GY I YLL R L L RI +++
Sbjct: 363 DEREMLEKWADFVREVDPDIFTGYNINNFDLPYLLNRAKHLNAKNFNFLGRIKDIKSIIK 422
Query: 411 ----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+N +N + GR+ +L +L E L+SYT + YH L E+
Sbjct: 423 EQIMQNKQMGRRENKSVNTEGRVPFDLLMVLLREYKLRSYTLNAVSYHFLGEQKEDVQHS 482
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++T + + + V Y ++ + +RL+E+L I EMAR+ G+ +L+RG
Sbjct: 483 IITDLQNGNSQTRRRLAV--YCLKDAYLPLRLLEKLMCIINYMEMARVTGVPLSCLLTRG 540
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
Q +V S +LR ++ +FV P+ E +I EP Y+DPI LDF SL
Sbjct: 541 QQIKVVSQLLRKAKEKDFVI--PTYSGGGQDEQFEGATVI-EPLRGYYSDPIATLDFSSL 597
Query: 586 YPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
YPS+++A+N C++T L G E LG+S ++ +P+G F
Sbjct: 598 YPSIMMAHNLCYTTLLQPGSKEKLGLS--------------------PEDYVQTPAGNYF 637
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V +S+R G+LP++L+ +L R K +KE
Sbjct: 638 VRQSVRKGLLPEILENLLSARKKAKDDLKE 667
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y+DPI LDF SLYPS+++A+N C++T L G E LG+S
Sbjct: 585 YSDPIATLDFSSLYPSIMMAHNLCYTTLLQPGSKEKLGLS 624
>gi|324120760|dbj|BAJ78771.1| DNA polymerase delta catalytic subunit [Lucidina biplagiata]
Length = 1045
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 185/398 (46%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPIQMNFVSNEKELFST---FIENVRQWDPDILIGY-EIETFSWGYLLE 348
G++ PE P+ ++N +L+ + NV + IG+ E+ F
Sbjct: 260 GRKGIFPEANVDPVIQ--IANVXKLYGSDDVLTRNVFTLNTCAAIGHAEVRCFE------ 311
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+++ + + VR DPD+ GY I YLL+R L L L RI +
Sbjct: 312 -----TEQQMLEAWADFVRDLDPDVFTGYNINNFDIPYLLDRAKHLKLKNFDFLGRILGI 366
Query: 409 EKRNSSRDEVKNTQ--------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+++ ++ V T+ + GR+ +++ +++ + L+SYT N+ +L E+
Sbjct: 367 --KSAVKETVNQTKFGKRTFKTVNFEGRVTYDMFVVMKRDFKLRSYTLNNVSNEILGEQK 424
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
+ ++T + + V Y I+ + +RL++ + EMAR+ G+
Sbjct: 425 EDVHYSIITDLQNGDEQTRRRLAV--YCIKDADLPLRLLDHVKSFANDIEMARVTGVSIT 482
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPES----LPLILEPESRLYTD 575
+L++G Q +V + +LR S+ + + + H AP S ++EP YTD
Sbjct: 483 SLLTKGEQIKVVAQLLRHSQQSGYFMPT-------HRYAPSSEQYEGATVIEPIRGYYTD 535
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS++IA+N C++T L H G+ D L +T
Sbjct: 536 PIATLDFSSLYPSIMIAHNLCYTTLL----HSGMKD--------------KLGLTSDEIT 577
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++PS FV S+R G+LP++LQ++L R K ++K+
Sbjct: 578 VTPSQNMFVKSSVRPGLLPEILQQLLAARKRAKDALKD 615
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
YTDPI LDF SLYPS++IA+N C++T L H G+ D
Sbjct: 533 YTDPIATLDFSSLYPSIMIAHNLCYTTLL----HSGMKDKL 569
>gi|297793989|ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
gi|297310714|gb|EFH41138.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
Length = 1092
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 189/400 (47%), Gaps = 57/400 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P IQ+ N V+ E F + ++ P ++G ++ +F
Sbjct: 314 GRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSCAP--IVGVDVMSFE------ 365
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--T 406
E+E+ + + +R DPDI+IGY I YL+ER LG+ L R+ +
Sbjct: 366 -----TEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRVKNS 420
Query: 407 EVEKRNS---SRD----EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
V R+S SR E K T ++ GR +L + + + L SY+ ++ H L E+
Sbjct: 421 RVRVRDSTFSSRQQGIRESKETTIE--GRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQ 478
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T E R L + + YL + RL+++L FI EMAR+ G
Sbjct: 479 KEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMARVTG 533
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG +V S +LR ++ N V P+ KQ + +LE + Y
Sbjct: 534 VPISFLLARGQSIKVLSQLLRKAKQKNLVL--PNAKQSGSEQGTYEGATVLEARTGFYEK 591
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++AYN C+ T + + +R L +++T
Sbjct: 592 PIATLDFASLYPSIMMAYNLCYCTLVTPED------------------VRKLNLPPEHVT 633
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV +S++ GILP++L+E+L R K +KE K
Sbjct: 634 RTPSGETFVKQSLQKGILPEILEELLTARKRAKADLKEAK 673
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 584 ARTGFYEKPIATLDFASLYPSIMMAYNLCYCT 615
>gi|324120690|dbj|BAJ78736.1| DNA polymerase delta catalytic subunit [Nipponatelura sp. 66-1]
Length = 1006
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 52/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE + P IQ+ + ++ F+ NV D +IG ++ +FS
Sbjct: 220 GRKGIFPEPQHDPVIQIANMVIKQGSPEPFVRNVFTLDTCAPIIGCQVHSFS-------- 271
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV-- 408
E EL + + VR+ DPDI GY I YLL R L +N L RI +
Sbjct: 272 ---KESELLEKWADFVREVDPDIFTGYNINNFDLPYLLNRAKHLNVNYFHYLGRIKNIKS 328
Query: 409 -------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ + R E KN + GR+ +L +L + L+SYT + YH L E+
Sbjct: 329 VVKEQVLQSKQLGRRENKNINTE--GRVPFDLLLVLVRDYKLRSYTLNAVSYHFLLEQKE 386
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + V Y ++ + +RL+E+L I EMAR+ G+
Sbjct: 387 DVHHSVITDLQNGNPQTRRRLAV--YCLKDAYLPLRLLEKLMCIINYMEMARVTGVPLSC 444
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR +R +FV + S+ + + ++EP+ Y DPI L
Sbjct: 445 LLTRGQQIKVVSQLLRKAREKDFVIPTYSVGVQEEQYEGAT---VIEPKRGYYADPIATL 501
Query: 581 DFQSLYPSVIIAYNYCFSTCL-GRV-EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C+++ L G V + LG++ T +P
Sbjct: 502 DFSSLYPSIMMAHNLCYTSLLQGSVKDKLGLTPD--------------------QYTKTP 541
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+G FV S+R G+LP++L+ +L R K +K+
Sbjct: 542 AGNFFVKTSVRKGLLPEILENLLAARKKAKADLKD 576
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+++A+N C+++ L
Sbjct: 494 YADPIATLDFSSLYPSIMMAHNLCYTSLL 522
>gi|221053875|ref|XP_002261685.1| dna polymerase delta catalytic subunit [Plasmodium knowlesi strain
H]
gi|193808145|emb|CAQ38848.1| dna polymerase delta catalytic subunit,putative [Plasmodium
knowlesi strain H]
Length = 1096
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 31/331 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE----VE 409
+EK L + E + + DPD L GY I Y+L RG L L + L RI V+
Sbjct: 369 DEKTLLDAWNEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKMLGRIKNISSVVK 428
Query: 410 KRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
N S + N ++ + GRI +++ L+R + L+SYT + + L E+ +
Sbjct: 429 DSNFSSKQFGNHETKEININGRIQFDVYDLIRRDYKLKSYTLNYVSFEFLKEQKEDVHYS 488
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGII--RLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ K + Y I+ GI+ RLI++L FI EMAR+ G F +L+R
Sbjct: 489 IMNDLQNESPESRKRIAT--YCIK-DGILPLRLIDKLLFIYNYVEMARVTGTPFVYLLTR 545
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + N+V S IK ++ + + +LEP Y +PI LDF S
Sbjct: 546 GQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGAT--VLEPIKGYYIEPISTLDFAS 603
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++IA+N C+ST + N I L++ S + FV
Sbjct: 604 LYPSIMIAHNLCYSTLVKN-----------------NSEIEGLEQEDITSIQGKSNIKFV 646
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
KS++ GILP +++E++D R VK +K K
Sbjct: 647 KKSVKKGILPMIVEELIDARKKVKLLIKNEK 677
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +PI LDF SLYPS++IA+N C+ST
Sbjct: 592 YIEPISTLDFASLYPSIMIAHNLCYST 618
>gi|186532719|ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=Protein EMBRYO DEFECTIVE 2780
gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
thaliana]
gi|332010438|gb|AED97821.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1095
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 57/400 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P IQ+ N V+ E F + ++ P ++G ++ +F
Sbjct: 317 GRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSCAP--IVGVDVMSFE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--T 406
E+E+ + + +R DPDI+IGY I YL+ER LG+ L R+ +
Sbjct: 369 -----TEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRVKNS 423
Query: 407 EVEKRNS---SRD----EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
V R+S SR E K T ++ GR +L + + + L SY+ ++ H L E+
Sbjct: 424 RVRVRDSTFSSRQQGIRESKETTIE--GRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQ 481
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T E R L + + YL + RL+++L FI EMAR+ G
Sbjct: 482 KEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMARVTG 536
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG +V S +LR + N V P+ KQ + +LE + Y
Sbjct: 537 VPISFLLARGQSIKVLSQLLRKGKQKNLVL--PNAKQSGSEQGTYEGATVLEARTGFYEK 594
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++AYN C+ T + + +R L +++T
Sbjct: 595 PIATLDFASLYPSIMMAYNLCYCTLVTPED------------------VRKLNLPPEHVT 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV ++++ GILP++L+E+L R K +KE K
Sbjct: 637 KTPSGETFVKQTLQKGILPEILEELLTARKRAKADLKEAK 676
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 587 ARTGFYEKPIATLDFASLYPSIMMAYNLCYCT 618
>gi|8777309|dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
Length = 1081
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 57/400 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P IQ+ N V+ E F + ++ P ++G ++ +F
Sbjct: 315 GRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSCAP--IVGVDVMSFE------ 366
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--T 406
E+E+ + + +R DPDI+IGY I YL+ER LG+ L R+ +
Sbjct: 367 -----TEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRVKNS 421
Query: 407 EVEKRNS---SRD----EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
V R+S SR E K T ++ GR +L + + + L SY+ ++ H L E+
Sbjct: 422 RVRVRDSTFSSRQQGIRESKETTIE--GRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQ 479
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T E R L + + YL + RL+++L FI EMAR+ G
Sbjct: 480 KEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMARVTG 534
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG +V S +LR + N V P+ KQ + +LE + Y
Sbjct: 535 VPISFLLARGQSIKVLSQLLRKGKQKNLVL--PNAKQSGSEQGTYEGATVLEARTGFYEK 592
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++AYN C+ T + + +R L +++T
Sbjct: 593 PIATLDFASLYPSIMMAYNLCYCTLVTPED------------------VRKLNLPPEHVT 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV ++++ GILP++L+E+L R K +KE K
Sbjct: 635 KTPSGETFVKQTLQKGILPEILEELLTARKRAKADLKEAK 674
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+R Y PI LDF SLYPS+++AYN C+ T +
Sbjct: 585 ARTGFYEKPIATLDFASLYPSIMMAYNLCYCTLV 618
>gi|324120712|dbj|BAJ78747.1| DNA polymerase delta catalytic subunit [Nomadacris japonica]
Length = 1092
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 158/331 (47%), Gaps = 39/331 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV----- 408
E E+ + E VR+ DPD+ GY I + YL+ R L L RI +
Sbjct: 364 KETEMLEKWAEFVREVDPDLFTGYNINNFDFYYLISRASHLNARNFNYLGRIKNIKSVVK 423
Query: 409 ----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ + R E KN ++ GR+ +L +L E L+SYT + YH L E+
Sbjct: 424 EQVLQSKQMGRRENKNVNVE--GRVAFDLLLVLLREYKLRSYTLNAVSYHFLQEQKEDVH 481
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++T + + V Y ++ + IRL+++L I EMAR+ G+ +L+
Sbjct: 482 HNIITDLQNGNPQTRRRLAV--YCLKDAYLPIRLLDKLMCIINYMEMARVTGVSLASLLT 539
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S +LR +R N++ P+ A E +I EP+ Y+DPI LDF
Sbjct: 540 RGQQIKVVSQLLRKARERNYLM--PAYGGGAQEEQFEGATVI-EPKKGYYSDPIATLDFS 596
Query: 584 SLYPSVIIAYNYCFSTCLGRV--EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+++A+N C++T L V + LG+S T +P+G
Sbjct: 597 SLYPSIMMAHNLCYTTLLQGVAKDRLGLSPD--------------------QYTKTPAGN 636
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +S+ G+LP++L+ +L R K+ +K
Sbjct: 637 YFVRQSVCKGLLPEILENLLSARKRAKEELK 667
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV--EHLGVS 148
Y+DPI LDF SLYPS+++A+N C++T L V + LG+S
Sbjct: 586 YSDPIATLDFSSLYPSIMMAHNLCYTTLLQGVAKDRLGLS 625
>gi|294947427|ref|XP_002785371.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239899167|gb|EER17167.1| dna polymerase zeta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 211
Score = 134 bits (336), Expect = 2e-28, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 105/184 (57%), Gaps = 7/184 (3%)
Query: 427 GRIVINLWRLLRHE--VNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTV 484
GRI ++LW+ LR E + L + T +L +P LL WW T +
Sbjct: 8 GRITLDLWQTLRQEDSLKLATTTLHGAAKQLLGLTLPRIPMWLLQEWW---TDASCCIDA 64
Query: 485 EHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI-QFYEVLSRGSQFRVESIMLRLSRLNN 542
Y +R+ + ++L++ + R SEMA + G+ EVL+RGSQ+RVE I+ R +
Sbjct: 65 FKYTVRLCTLGLQLLDASALLSRASEMASVLGMPDVEEVLTRGSQYRVECILHRAASRTG 124
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
F VS S Q A E +P++LEP S Y P I+LDFQSLYPS+IIAYN CFSTCLG
Sbjct: 125 FGLVSSSKAQVKAQPALEGVPMVLEPRSGYYRTPTIILDFQSLYPSIIIAYNMCFSTCLG 184
Query: 603 RVEH 606
RVEH
Sbjct: 185 RVEH 188
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
R Y P I+LDFQSLYPS+IIAYN CFSTCLGRVEH
Sbjct: 151 RSGYYRTPTIILDFQSLYPSIIIAYNMCFSTCLGRVEH 188
>gi|340714998|ref|XP_003396008.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus terrestris]
Length = 1104
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 184/393 (46%), Gaps = 48/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ ++ + F+ N+ D ++G ++ +F
Sbjct: 321 GRKGIFPEPNHDPVIQIANMAIRQGEAEPFLRNIFTLDTCAPIVGCQVLSFE-------- 372
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E+++ + + VRQ DPDI GY I + YL+ R L + L RI ++
Sbjct: 373 ---KEQKMLEKWADFVRQLDPDIFTGYNINNFDFTYLINRAKHLNVKDFYFLGRIKNIKS 429
Query: 411 ---------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 430 VIKTQVFLSKQMGRRE--NKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKE 487
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 488 DVHHSIITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSICS 545
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR +R ++ P + +A E +I EP+ Y+DPI L
Sbjct: 546 LLTRGQQIKVVSQLLRKTREKGYLI--PVHRGQASDEQFEGATVI-EPKRGYYSDPIATL 602
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+I+A+N C++T L R N I+ LK ++T++PS
Sbjct: 603 DFSSLYPSIIMAHNLCYTTLLKR-----------------NTQIK-LKIDSDDITVTPSD 644
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV ++R GILP++L+ +L R K +K+
Sbjct: 645 SQFVKATLRKGILPEILENLLTARKAAKAELKK 677
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y+DPI LDF SLYPS+I+A+N C++T L R
Sbjct: 595 YSDPIATLDFSSLYPSIIMAHNLCYTTLLKR 625
>gi|340714996|ref|XP_003396007.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus terrestris]
Length = 1090
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 184/393 (46%), Gaps = 48/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ ++ + F+ N+ D ++G ++ +F
Sbjct: 307 GRKGIFPEPNHDPVIQIANMAIRQGEAEPFLRNIFTLDTCAPIVGCQVLSFE-------- 358
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E+++ + + VRQ DPDI GY I + YL+ R L + L RI ++
Sbjct: 359 ---KEQKMLEKWADFVRQLDPDIFTGYNINNFDFTYLINRAKHLNVKDFYFLGRIKNIKS 415
Query: 411 ---------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 416 VIKTQVFLSKQMGRRE--NKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKE 473
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 474 DVHHSIITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSICS 531
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR +R ++ P + +A E +I EP+ Y+DPI L
Sbjct: 532 LLTRGQQIKVVSQLLRKTREKGYLI--PVHRGQASDEQFEGATVI-EPKRGYYSDPIATL 588
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+I+A+N C++T L R N I+ LK ++T++PS
Sbjct: 589 DFSSLYPSIIMAHNLCYTTLLKR-----------------NTQIK-LKIDSDDITVTPSD 630
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV ++R GILP++L+ +L R K +K+
Sbjct: 631 SQFVKATLRKGILPEILENLLTARKAAKAELKK 663
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y+DPI LDF SLYPS+I+A+N C++T L R
Sbjct: 581 YSDPIATLDFSSLYPSIIMAHNLCYTTLLKR 611
>gi|324120758|dbj|BAJ78770.1| DNA polymerase delta catalytic subunit [Eretes sticticus]
Length = 998
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 37/329 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E EL + + VR DPD+ GY I + YLL R L + L R+ V +
Sbjct: 272 EYELLEAWGQFVRDIDPDLFTGYNINDFDFPYLLNRAEHLKVKNFPYLGRLKNV--LTAV 329
Query: 415 RDEVKNTQ--------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
++ + T+ + GRI+ ++ +++ + L+SYT N+ +L E+ +
Sbjct: 330 KENINQTKFGKRTFITINFEGRILYDMLVVMKRDFKLRSYTLNNVSQEILGEQKEDVHYS 389
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++T + + V Y ++ + +RL+ + EMAR+ G+ +L++G
Sbjct: 390 IITDLQNGDEQTRRRLAV--YCVKDADLPLRLLNHVKSFTNDIEMARVTGVPLTSLLTKG 447
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
Q +V + +LR +R +N+ P+++ +A+ ++EP YTDPI LDF SL
Sbjct: 448 EQVKVVAQLLRHARAHNYFM--PAVQGQANSEQSYEGATVIEPVRGYYTDPIATLDFSSL 505
Query: 586 YPSVIIAYNYCFSTCLGRV--EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
YPS++IA+N C++T + +V + LG+++ +T +P+G F
Sbjct: 506 YPSIMIAHNLCYTTLINKVTKDKLGLTND--------------------QITETPAGHLF 545
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
V ++R G+LP++LQ +L R K +K
Sbjct: 546 VKSTVREGLLPQILQSLLSARKRTKAELK 574
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV--EHLGVSD 149
YTDPI LDF SLYPS++IA+N C++T + +V + LG+++
Sbjct: 493 YTDPIATLDFSSLYPSIMIAHNLCYTTLINKVTKDKLGLTN 533
>gi|324120700|dbj|BAJ78741.1| DNA polymerase delta catalytic subunit [Ephemera japonica]
Length = 1006
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 166/341 (48%), Gaps = 48/341 (14%)
Query: 350 HFVSNEKELFSIFIEN----VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI 405
+SN+ E S +EN VR+ DPDI+ GY I Y+L R + L RI
Sbjct: 266 QVLSNQTE--SALLENWANFVREVDPDIITGYNINNFDLYYMLSRAKHINARNFDFLGRI 323
Query: 406 TEVEKRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
+ + ++D + +N + M GR++ +L +L + L+SYT + +H L
Sbjct: 324 KNI--KTVAKDSMIQSKQMGRRENKKFNMEGRVIFDLLLVLLRDYKLRSYTLNAVSFHFL 381
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + R L + + YL ++L+E+L I EMAR
Sbjct: 382 GEQKEDVHHSIITDLQNGDDQTRRRLAVYCVKDAYLP-----LKLLEKLMCIINYMEMAR 436
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ +L+RG Q +V S +LR ++ +FV + S+K + + ++EP+
Sbjct: 437 VTGVSLLCLLTRGQQIKVISQLLRKAKEKDFVIPTYSVKGSNDEQYEGAT--VIEPKKGY 494
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y PI+ LDF SLYPS+++A+N C++T + + L +S +
Sbjct: 495 YKQPIVTLDFSSLYPSIMMAHNLCYTTLVQNKDRLKLS--------------------SE 534
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
TI+P+G FV SIR G+LP++L+ +L R K+ +K+
Sbjct: 535 QYTITPNGDCFVKTSIRKGLLPEILESLLSARKKAKEDLKK 575
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVS 148
Y PI+ LDF SLYPS+++A+N C++T + + L +S
Sbjct: 495 YKQPIVTLDFSSLYPSIMMAHNLCYTTLVQNKDRLKLS 532
>gi|300121429|emb|CBK21809.2| unnamed protein product [Blastocystis hominis]
Length = 626
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 2/180 (1%)
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
I ++ + R E + GI + L+RGSQ+++E+I+LR++ +F ++ S Q A
Sbjct: 9 IHILYHTHILNRLIESCTIQGIDLTDELTRGSQYKIENILLRINNSKDFSSIFVSKLQLA 68
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV-EHLGV-SDS 612
H + S+PL++EP S LY DP++V+DFQSLYPSV+IAYN CFSTCLG + + GV +
Sbjct: 69 HQPSAASIPLVMEPYSNLYNDPLVVMDFQSLYPSVMIAYNICFSTCLGNLNKKTGVWIER 128
Query: 613 FPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G + + +SP+G FV+K++R GI+ KM+ EIL R+++K +K
Sbjct: 129 VLNGSLGCTKEREIEAAYKGGFHVSPTGTVFVNKNVREGIIVKMVSEILRIRILIKNVLK 188
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
LY DP++V+DFQSLYPSV+IAYN CFSTCLG +
Sbjct: 86 LYNDPLVVMDFQSLYPSVMIAYNICFSTCLGNL 118
>gi|291190618|ref|NP_001167152.1| DNA polymerase delta catalytic subunit [Salmo salar]
gi|223648376|gb|ACN10946.1| DNA polymerase delta catalytic subunit [Salmo salar]
Length = 1105
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 36/330 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK-- 410
+ E +L + E VR D DI+ GY I+ YLL R L +NL L R+ ++
Sbjct: 376 TKESQLLQSWAEFVRTVDADIITGYNIQNFDLPYLLNRAATLKVNLFPYLGRVQGIKSVL 435
Query: 411 RNSS-----RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
R+SS +N L M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 436 RDSSFQSKQMGRRENKILNMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQH 495
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + EMAR+ G+ +LSR
Sbjct: 496 SIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLLSR 553
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR + V P +K + ++EPE Y+ PI LDF S
Sbjct: 554 GQQIKVVSQLLRQAMKQGLVM--PVVKPEGG--EDYTGATVIEPEKGYYSVPIATLDFSS 609
Query: 585 LYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
LYPS+++A+N C++T L G E LG++ ++ +P+G
Sbjct: 610 LYPSIMMAHNLCYTTLLQKGSAEKLGLN--------------------PEDFIKTPTGDL 649
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP +L+++L R K +K
Sbjct: 650 FVKSSVRKGLLPDILEDLLSARKKAKAELK 679
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y+ PI LDF SLYPS+++A+N C++T L G E LG++
Sbjct: 598 YSVPIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKLGLN 637
>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1159
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 31/329 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---- 408
S+EK L + E + + DPD L GY I Y+L RG L L + L RI +
Sbjct: 431 SDEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKMLGRIKNISSVV 490
Query: 409 -EKRNSSRD--EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
E SS+ + ++ + GRI +++ L++ + L+SYT + + L E+ +
Sbjct: 491 KESSFSSKQFGTHETKEININGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHY 550
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGII--RLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++ K + Y I+ GI+ RLI++L FI EMAR+ G F +L+
Sbjct: 551 SIMNDLQNESPESRKRIAT--YCIK-DGILPLRLIDKLLFIYNYVEMARVTGTPFVYLLT 607
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S + R + N+V S IK ++ + + +LEP Y +PI LDF
Sbjct: 608 RGQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGAT--VLEPIKGYYIEPISTLDFA 665
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++IA+N C+ST + N I LK+ + + F
Sbjct: 666 SLYPSIMIAHNLCYSTLVKN-----------------NSEIEGLKQEEVTSIQGKGNIKF 708
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
V +S++ GILP +++E++D R VK +K
Sbjct: 709 VKRSVKKGILPLIVEELIDARKKVKLLIK 737
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +PI LDF SLYPS++IA+N C+ST
Sbjct: 655 YIEPISTLDFASLYPSIMIAHNLCYST 681
>gi|320581797|gb|EFW96016.1| Catalytic subunit of DNA polymerase delta [Ogataea parapolymorpha
DL-1]
Length = 1102
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 191/404 (47%), Gaps = 69/404 (17%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENV---RQWDPDILIGYEIETFSWGYLLE 348
G++ PE P IQ+ V + F+ NV + P ++G E TFS+
Sbjct: 322 GRKGIFPEAEHDPVIQIANVVAKAGDPVPFVRNVFTVKSCAP--IVGSE--TFSY----- 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
+E+E+ + E + + DPD++IGY I + YL+ R LG++ SR+
Sbjct: 373 ----ESEEEMLLKWKEFIVKVDPDVIIGYNIANFDFPYLINRARALGVHDFPYFSRL--- 425
Query: 409 EKRNSSRDEVKNT-------------QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
+S+ E+K+T + + GR+ ++L + ++ E L+SYT + H
Sbjct: 426 ---KNSKQEIKDTFFSSRAYGSRENKVVNIEGRMQLDLLQFIQREYKLRSYTLNAVSAHF 482
Query: 456 LHERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
L+E+ ++T E R L + + YL +RL E+L + +EMA
Sbjct: 483 LNEQKEDVQHSIITDLQNGNQETRRRLAVYCLKDAYLP-----LRLAEKLMCLVNYTEMA 537
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESR 571
R+ G+ F +LSRG Q +V S + R + + V P+IK E +I EP
Sbjct: 538 RVTGVPFSFLLSRGQQIKVISQLFR--KCLDLDIVIPNIKSEGVNEEYEGATVI-EPVRG 594
Query: 572 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKK 629
Y PI LDF SLYPS+++A+N C++T L + VE LG+ K
Sbjct: 595 YYDVPIATLDFASLYPSIMMAHNLCYTTLLNKQTVERLGL-------------------K 635
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++ ++P+G FV +R GILP +LQE+L R KQ +K+
Sbjct: 636 QDEDYIVTPNGDMFVHPHLRKGILPTILQELLAARKKAKQDLKK 679
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T L + VE LG+
Sbjct: 596 YDVPIATLDFASLYPSIMMAHNLCYTTLLNKQTVERLGL 634
>gi|350397573|ref|XP_003484918.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus impatiens]
Length = 1104
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 31/327 (9%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E+++ + + VRQ DPDI GY I + YL+ R L + L RI ++
Sbjct: 374 EQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAKHLNVRDFYFLGRIKNIKSVIKT 433
Query: 411 ---RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ +N + GR+ +L +L + L+SYT + YH L E+ +
Sbjct: 434 QVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSI 493
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG
Sbjct: 494 ITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSICSLLTRGQ 551
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR +R +++ P + +A E +I EP+ Y+DPI LDF SLY
Sbjct: 552 QIKVVSQLLRKTREKDYLI--PVHRGQASDEQFEGATVI-EPKRGYYSDPIATLDFSSLY 608
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+I+A+N C++T L R + LK ++T++PS FV
Sbjct: 609 PSIIMAHNLCYTTLLKRDTEI------------------KLKIDSDDITVTPSDSKFVKA 650
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKE 673
++R GILP++L+ +L R K +K+
Sbjct: 651 TLRKGILPEILESLLSARKAAKAELKK 677
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + D P + +++ F+ + Y+DPI LDF SLYPS+I+A
Sbjct: 557 SQLLRKTREKDYLIPVHRGQASDEQFEGATV--IEPKRGYYSDPIATLDFSSLYPSIIMA 614
Query: 131 YNYCFSTCLGR 141
+N C++T L R
Sbjct: 615 HNLCYTTLLKR 625
>gi|358335780|dbj|GAA54399.1| DNA polymerase delta subunit 1 [Clonorchis sinensis]
Length = 1128
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 160/330 (48%), Gaps = 24/330 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-------- 405
EKEL + VRQ DPDI+ GY + YL+ R L ++ L R+
Sbjct: 382 TEKELLEHWAMFVRQVDPDIITGYNTQNFDLPYLINRANHLKVDSFAFLGRVRGARSTVR 441
Query: 406 -TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ + R E K T ++ GR+ ++L ++L + L+SYT + YH L E+
Sbjct: 442 DVMTQSKQMGRRENKFTNIE--GRVQLDLLQILFRDYKLRSYTLNAVSYHFLEEQKEDVE 499
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+++ H + + V Y ++ + +RL+++L + EMAR+ G+ +++
Sbjct: 500 HNVISDLQNGDAHTRRRLAV--YCLKDAYLPLRLLDKLMCVVNNIEMARVTGVPLTYLIT 557
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S +LR +R ++FV + +Q +LEP Y +PI LDF
Sbjct: 558 RGQQVKVISQLLRKAREHDFVLPTYQSQQGDEYVGA----TVLEPIKGFYNEPIATLDFA 613
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+++AYN C++T + VS++ LN + + +P+G F
Sbjct: 614 SLYPSIMMAYNLCYTTL------MQVSNTPGGAAAGLNAFVERYNLSPDDYICTPTGAYF 667
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V S+ G+LP++L+++L R K + +
Sbjct: 668 VKSSVHRGLLPEILEQLLSARKKAKADLAK 697
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++AYN C++T +
Sbjct: 602 FYNEPIATLDFASLYPSIMMAYNLCYTTLM 631
>gi|350397570|ref|XP_003484917.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus impatiens]
Length = 1090
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 31/327 (9%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E+++ + + VRQ DPDI GY I + YL+ R L + L RI ++
Sbjct: 360 EQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAKHLNVRDFYFLGRIKNIKSVIKT 419
Query: 411 ---RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ +N + GR+ +L +L + L+SYT + YH L E+ +
Sbjct: 420 QVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSI 479
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG
Sbjct: 480 ITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSICSLLTRGQ 537
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR +R +++ P + +A E +I EP+ Y+DPI LDF SLY
Sbjct: 538 QIKVVSQLLRKTREKDYLI--PVHRGQASDEQFEGATVI-EPKRGYYSDPIATLDFSSLY 594
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+I+A+N C++T L R + LK ++T++PS FV
Sbjct: 595 PSIIMAHNLCYTTLLKRDTEI------------------KLKIDSDDITVTPSDSKFVKA 636
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKE 673
++R GILP++L+ +L R K +K+
Sbjct: 637 TLRKGILPEILESLLSARKAAKAELKK 663
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + D P + +++ F+ + Y+DPI LDF SLYPS+I+A
Sbjct: 543 SQLLRKTREKDYLIPVHRGQASDEQFEGATV--IEPKRGYYSDPIATLDFSSLYPSIIMA 600
Query: 131 YNYCFSTCLGR 141
+N C++T L R
Sbjct: 601 HNLCYTTLLKR 611
>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
Length = 1096
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---TEVEK 410
+EK L + E + + DPD L GY I Y+L RG L L + L RI + V K
Sbjct: 369 DEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKMLGRIKSISSVVK 428
Query: 411 RNSSRDEVKNT----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+S + T ++ + GRI +++ L++ + L+SYT + + L E+ +
Sbjct: 429 ESSFSSKQFGTHETKEININGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHYS 488
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGII--RLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ K + Y I+ GI+ RLI++L FI EMAR+ G F +L+R
Sbjct: 489 IMNDLQNESPESRKRIAT--YCIK-DGILPLRLIDKLLFIYNYVEMARVTGTPFVYLLTR 545
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + N+V S IK ++ + + +LEP Y +PI LDF S
Sbjct: 546 GQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGAT--VLEPIKGYYIEPISTLDFAS 603
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++IA+N C+ST + N I LK+ S + FV
Sbjct: 604 LYPSIMIAHNLCYSTLVKN-----------------NAEIEGLKQEDVTSIQGKSNIKFV 646
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMK 672
+S++ GILP +++E++D R VK +K
Sbjct: 647 KRSVKKGILPLIVEELIDARKKVKLLIK 674
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +PI LDF SLYPS++IA+N C+ST
Sbjct: 592 YIEPISTLDFASLYPSIMIAHNLCYST 618
>gi|242070347|ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 188/401 (46%), Gaps = 59/401 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENV---RQWDPDILIGYEIETFSWGYLL 347
G++ PE P IQ+ N V+++ E F++NV + P ++G ++ +F
Sbjct: 319 GRKGHFPEPTHDPVIQIANLVTHQGE-GQPFVQNVMTLKSCSP--IVGVDVRSFD----- 370
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-- 405
E+++ + + +R+ DPDI+IGY I YL+ER VL + L RI
Sbjct: 371 ------TERDILLAWRDFIREVDPDIIIGYNICKFDMPYLIERAEVLKIAEFPILGRIRN 424
Query: 406 -------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
T R E K+ ++ GR+ +L + ++ + L SY+ ++ H L E
Sbjct: 425 SRVRVRDTTFSSRQYGVRESKDVTIE--GRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGE 482
Query: 459 RIP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ HS L E R L + + YL + RL+++L +I EMAR+
Sbjct: 483 QKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQ-----RLLDKLMYIYNYVEMARVT 537
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ +LSRG +V S +LR ++ N V P+IK + + +LE + Y
Sbjct: 538 GVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNIKGQGSGQDTFEGATVLEARAGFYE 595
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
PI LDF SLYPS+++AYN C+ T + P LN+ S+ K
Sbjct: 596 KPIATLDFASLYPSIMMAYNLCYCTLVP-----------PEDARKLNLPPESINK----- 639
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 640 --TPSGEIFVKPELQKGILPEILEELLAARKRAKADLKEAK 678
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K + + D F ++ +R Y PI LDF SLYPS+
Sbjct: 555 SQLLRKAKQKNLVIPNIKGQGS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 610
Query: 128 IIAYNYCFST 137
++AYN C+ T
Sbjct: 611 MMAYNLCYCT 620
>gi|302803951|ref|XP_002983728.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
gi|300148565|gb|EFJ15224.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
Length = 984
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 189/395 (47%), Gaps = 51/395 (12%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E + NV ++G ++ +F
Sbjct: 204 GRKGHFPEPEHDPVIQIANLVTVQGE-SRPMVRNVMTLKSCSAIVGVDVMSFD------- 255
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--TE 407
EKE+ + + +R+ DPDI+IGY I YL+ER LG+ L RI +
Sbjct: 256 ----TEKEVLLAWRDLIREVDPDIIIGYNICKFDMPYLIERAQKLGIVEFPVLGRIRNSR 311
Query: 408 VEKRN---SSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP- 461
V R+ SSR ++ ++ + GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 312 VRVRDATFSSRQYGIRESKEVLIEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKED 371
Query: 462 -LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
HS L E R L + + YL + RL+E+L FI EMAR+ G+
Sbjct: 372 VHHSIIADLQNGNSETRRRLAVYCLKDAYLPQ-----RLLEKLMFIYNYIEMARVTGVPI 426
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG +V S +LR R NFV P+IK + + +LE + Y PI
Sbjct: 427 SFLLSRGQSIKVLSQILRKCRQRNFVV--PNIKGQGAGQETFEGATVLEARAGFYEKPIA 484
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+++AYN C+ T L R E LN++ +N+ +P
Sbjct: 485 TLDFASLYPSIMMAYNLCYCT-LVRTEDQA----------RLNIA-------PENVNKTP 526
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
SG FV ++ GILP++L+E+L R + +KE
Sbjct: 527 SGEMFVKTNMEKGILPEILEELLAARKRARADLKE 561
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 474 ARAGFYEKPIATLDFASLYPSIMMAYNLCYCT 505
>gi|348533053|ref|XP_003454020.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oreochromis
niloticus]
Length = 1105
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 161/331 (48%), Gaps = 36/331 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK-- 410
+ E +L + E +R DPDI+ GY I+ + YLL R L +N L R+ ++
Sbjct: 376 TQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVNYFPYLGRVRGIKSVL 435
Query: 411 -----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ +N + M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 436 KDLNFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQH 495
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + EMAR+ G+ +LSR
Sbjct: 496 SIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLLSR 553
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR + + V P +K + ++EPE Y+ PI LDF S
Sbjct: 554 GQQIKVVSQLLRQAMKQDLVM--PVVKTEGG--EDYTGATVIEPEKGYYSLPIATLDFSS 609
Query: 585 LYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
LYPS+++A+N C++T L G V+ LG++ ++ +P+G
Sbjct: 610 LYPSIMMAHNLCYTTLLQKGSVDKLGLA--------------------PEDFIKTPTGDL 649
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+R G+LP++L+ +L R K +K+
Sbjct: 650 FVKSSLRKGLLPEILENLLSARKRAKAELKK 680
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y+ PI LDF SLYPS+++A+N C++T L G V+ LG++
Sbjct: 598 YSLPIATLDFSSLYPSIMMAHNLCYTTLLQKGSVDKLGLA 637
>gi|17559488|ref|NP_506017.1| Protein F10C2.4 [Caenorhabditis elegans]
gi|13124199|sp|P90829.1|DPOD1_CAEEL RecName: Full=DNA polymerase delta catalytic subunit
gi|3875739|emb|CAB04077.1| Protein F10C2.4 [Caenorhabditis elegans]
Length = 1081
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 161/339 (47%), Gaps = 52/339 (15%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NEK L + E VR+ DPDI+ GY I Y+L+R VL L L R + EK +
Sbjct: 343 NEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR--QKEKGSV 400
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER----- 459
RD N + + GRI+ ++ +++ + L+SYT ++ Y L E+
Sbjct: 401 VRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVE 460
Query: 460 ---IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
IP L + R L ++ + YL +RL+++L I EMAR+ G+
Sbjct: 461 HNIIP----DLQRGDEQTRRRLAQYCLKDAYLP-----LRLLDKLMSIINYIEMARVTGV 511
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+L++G Q ++ S+MLR + NNF P I+ + +++P Y +P
Sbjct: 512 PMNFLLTKGQQIKILSMMLRRCKQNNFFL--PVIEANSGDGEGYEGATVIDPIRGFYNEP 569
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS++IA+N C++T L + GV + ++
Sbjct: 570 IATLDFASLYPSIMIAHNLCYTTLLKSPQ--GVEN--------------------EDYIR 607
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG F KS R G+LP++L++IL R K MK K
Sbjct: 608 TPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMKNEK 646
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 94 SSFDSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+S D + + ++ D + Y +PI LDF SLYPS++IA+N C++T L
Sbjct: 546 NSGDGEGYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL 594
>gi|432868483|ref|XP_004071560.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryzias
latipes]
Length = 1107
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 160/333 (48%), Gaps = 40/333 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI------- 405
+ EK+L + E +R DPDI+ GY I+ + YL+ R L + L R+
Sbjct: 378 TQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINRAAALKVTYFPYLGRVRNMKSVL 437
Query: 406 --TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + + R E N + M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 438 KESNFQSKQMGRRE--NKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDV 495
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + V Y ++ + +RL+++L + EMAR+ G+ +L
Sbjct: 496 QHSIISDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLSYLL 553
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q +V S +LR + N V P +K + ++EPE Y+ PI LDF
Sbjct: 554 SRGQQIKVVSQLLRQAMKQNLVM--PVVKTEGG--EDYTGATVIEPEKGYYSVPITTLDF 609
Query: 583 QSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS+++A+N C++T L G VE L +S ++ +P+G
Sbjct: 610 SSLYPSIMMAHNLCYTTLLQKGSVERLQLSS--------------------EDFIKTPTG 649
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+R G+LP++L+ +L R K +K+
Sbjct: 650 DQFVKSSVRKGLLPEILENLLSARKRAKAELKK 682
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y+ PI LDF SLYPS+++A+N C++T L G VE L +S
Sbjct: 600 YSVPITTLDFSSLYPSIMMAHNLCYTTLLQKGSVERLQLS 639
>gi|324120756|dbj|BAJ78769.1| DNA polymerase delta catalytic subunit [Stichotrema asahinai]
Length = 1050
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 160/331 (48%), Gaps = 37/331 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
S E ++ + + VR DPD+ GY I + YL+ER L L LSRI V R+
Sbjct: 319 SKESDMLEAWAQFVRDIDPDLFTGYNINNFDFPYLIERAKHLSLENFSYLSRIRNV--RS 376
Query: 413 SSRDEVKNTQ--------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
R+ V T+ + GRI +++ +++ ++ L+SYT N+ +L+E+
Sbjct: 377 ILRENVVQTKVGRRTFKAINFEGRIPYDMYVIVKRDLKLRSYTLNNVCQEILNEQKEDVH 436
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ ++T H K + V Y ++ + +RLI L+ EMAR+ G+ +L+
Sbjct: 437 YSIITDLHNGDEHTRKRLAV--YCVKDADLPMRLINHLNCFTNDIEMARVTGVMLTSLLA 494
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLD 581
+G Q +V + +LR + N+ + ++ A E ++EP YT+PI LD
Sbjct: 495 KGEQVKVVAQLLRHCQAANYFMPM----HQVNLDATEQFEGATVIEPIRGYYTNPIATLD 550
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS++IA+N C++T L D + D +S ++P+
Sbjct: 551 FSSLYPSIMIAHNLCYTTLLNP------GDKARYELTDDQIS------------LTPANN 592
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP++L+ +L R K +K
Sbjct: 593 QFVKSSVRRGLLPQILESLLSARKRTKLQLK 623
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
YT+PI LDF SLYPS++IA+N C++T L
Sbjct: 542 YTNPIATLDFSSLYPSIMIAHNLCYTTLLN 571
>gi|307167251|gb|EFN60939.1| DNA polymerase delta catalytic subunit [Camponotus floridanus]
Length = 1092
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 52/395 (13%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G+E PE + P+ M E E F I + P ++G ++ +F
Sbjct: 309 GREGIFPEAKHDPVIQIANMVIKQGESEPFLKNIFTLNTCAP--IVGCQVLSFD------ 360
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E + + + VRQ DPDI GY I + YL+ R L + L RI +
Sbjct: 361 -----KENLMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAQHLNVKNFNFLGRIKNI 415
Query: 409 EKRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
++ +D V +N + GR+ +L +L + L+SY+ + YH L E+
Sbjct: 416 --KSVIKDRVLQSKQLGRRENKSINFEGRVPFDLLLVLVRDYKLRSYSLNAVSYHFLQEQ 473
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
+K +T + + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 474 KEDVHYKDITSLQNGNSQTRRRLAV--YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSI 531
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR +R +++ + Q + ++EP+ Y PI
Sbjct: 532 SSLLTRGQQIKVVSQLLRKTREKDYLI---PVHQGQVVDEQFEGATVIEPKRGYYNSPIA 588
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+I+A+N C++T L + R L + +T++P
Sbjct: 589 TLDFSSLYPSIIMAHNLCYTTLLTLAKK------------------RELNIQEDQVTVTP 630
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S F+ ++R GILP++L+ +L R K +K+
Sbjct: 631 SNSLFIKSTVRKGILPEILENLLAARKKAKAELKQ 665
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+I+A+N C++T L
Sbjct: 583 YNSPIATLDFSSLYPSIIMAHNLCYTTLL 611
>gi|324120734|dbj|BAJ78758.1| DNA polymerase delta catalytic subunit [Gynaikothrips ficorum]
Length = 1091
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 39/333 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E E+F+ + + VR+ DPDI GY I + YL+ R L + L RI ++
Sbjct: 361 EAEMFTKWSDFVREVDPDIFTGYNIGNFDFPYLINRAEHLKVKPFPFLGRIKNIQSVVKE 420
Query: 411 -----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ R E N + GR+ +L +L + L+SYT ++ YH L E+
Sbjct: 421 SQFFSKQMGRRE--NKSINTEGRVAFDLLLILVRDYKLRSYTLNSVSYHFLQEQKEDVHH 478
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + IRL+E+L I EMAR+ G+ +L+R
Sbjct: 479 SVITDLQNGTPQTRRRLAV--YCLKDAYLPIRLLEKLMCIINYMEMARVTGVTLASLLTR 536
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR +R +F+ P+ + E +I EP+ Y DPI LDF S
Sbjct: 537 GQQIKVMSQLLRKAREKDFIM--PTYQSTGGDDQYEGATVI-EPKRGYYADPISTLDFSS 593
Query: 585 LYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
LYPS+++A+N C++T L E LG+S + +P+
Sbjct: 594 LYPSIMMAHNLCYTTLLLGNAKERLGLS--------------------ADQYSKTPANNF 633
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV S+R G+LP++L ++L R K +K K
Sbjct: 634 FVKPSVRKGLLPEILDDLLSARKKAKSDLKNEK 666
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y DPI LDF SLYPS+++A+N C++T L E LG+S
Sbjct: 582 YADPISTLDFSSLYPSIMMAHNLCYTTLLLGNAKERLGLS 621
>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
Length = 1050
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 162/345 (46%), Gaps = 47/345 (13%)
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
G+ R F E E+ + E VR+ DPDI GY I + YL+ER L L L
Sbjct: 308 GHAEVRSF-DTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLKRFDYLG 366
Query: 404 RITEVEKRNSSRDEVKNTQL--------QMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
RI ++ R+S ++ V T++ GR+ ++ +++ + L+SYT ++ +
Sbjct: 367 RILDI--RSSIKETVTQTKIGKRTFKSINFEGRVAYDMLMVIKRDFKLRSYTLNSVSQEI 424
Query: 456 LHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLF 514
L E+ + ++T + + V Y ++ + +R++ + EMAR+
Sbjct: 425 LGEQKEDVHYSVITDLQNGDEQTRRRLAV--YCLKDADLPVRILSTVRSFTNDVEMARVT 482
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPES----LPLILEPES 570
G+ +L++G Q +V + +L+ +R + + H AP S ++EP
Sbjct: 483 GVPITSLLTKGEQVKVVAQLLKHARAAGYFMPT-------HQGAPSSEQYEGATVIEPRR 535
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV--EHLGVSDSFPFGCIDLNVSIRSLK 628
YTDPI LDF SLYPS++IA+N C++T + E L +SD
Sbjct: 536 GYYTDPIATLDFSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSD----------------- 578
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ +T +P+ FV S+R G+LP +LQ +L R K +KE
Sbjct: 579 ---EQVTTTPANCMFVKSSVRPGLLPHILQHLLAARKKTKAELKE 620
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R YTDPI LDF SLYPS++IA+N C++T +
Sbjct: 534 RRGYYTDPIATLDFSSLYPSIMIAHNLCYTTLI 566
>gi|324120696|dbj|BAJ78739.1| DNA polymerase delta catalytic subunit [Epiophlebia superstes]
Length = 1007
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 179/395 (45%), Gaps = 52/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + + FI NV D ++G ++ +F
Sbjct: 219 GRKGIFPEPDHDPVIQIANMVIRQGSTEPFIRNVFTLDTCAPIVGCQVLSFK-------- 270
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E+EL + + VR+ DPD+ GY I YL+ R L L RI +++
Sbjct: 271 ---DERELLEKWADFVREVDPDLFTGYNINNFDLPYLINRAKHLNAKNFYFLGRIKDIKS 327
Query: 411 -------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+N +N + GR+ +L +L E L+SYT + YH L E+
Sbjct: 328 VIKEQIMQNKQMGRRENKSINTEGRVPFDLLMVLLREYKLRSYTLNAVSYHFLQEQKEDV 387
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + V Y ++ + +RL+++L I EMAR+ G+ +L
Sbjct: 388 QHSIISDLQNGNPQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSCLL 445
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q +V S +LR + +FV S +++ A ++EP Y DPI L
Sbjct: 446 TRGQQIKVVSQLLRKGKEKDFVIPTYSGAVQDEQFEGA-----TVIEPLRGYYADPITTL 500
Query: 581 DFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C++T L G E LG+S +P
Sbjct: 501 DFSSLYPSIMMAHNLCYTTLLQPGTKEKLGLSTD--------------------QYAKTP 540
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
SG FV +S+R G+LP++L+ +L R K +KE
Sbjct: 541 SGNFFVRESVRKGLLPEILENLLSARKKAKNELKE 575
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF---PFGCIASRES 161
Y DPI LDF SLYPS+++A+N C++T L G E LG+S D + P G RES
Sbjct: 493 YADPITTLDFSSLYPSIMMAHNLCYTTLLQPGTKEKLGLSTDQYAKTPSGNFFVRES 549
>gi|218185393|gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
Length = 1087
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 57/400 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P IQ+ N V+ E + F + ++ P ++G ++ +F
Sbjct: 307 GRKGHFPEPTHDPVIQIANLVTLQGEGQPFVRNVMTLKSCSP--IVGVDVMSFD------ 358
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--- 405
E+++ + + +R+ DPDI+IGY I YL+ER VL + L RI
Sbjct: 359 -----TERDVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRIRNS 413
Query: 406 ------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
T R E K+ ++ GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 414 RVRVRDTTFSSRQYGMRESKDVAVE--GRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQ 471
Query: 460 IP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS L E R L + + YL + RL+++L +I EMAR+ G
Sbjct: 472 KEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQ-----RLLDKLMYIYNYVEMARVTG 526
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG +V S +LR ++ N V P+IK +A + +LE + Y
Sbjct: 527 VPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNIKGQASGQDTFEGATVLEARAGFYEK 584
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++AYN C+ T + P LN+ S+ K
Sbjct: 585 PIATLDFASLYPSIMMAYNLCYCTLVP-----------PEDARKLNLPPESVNK------ 627
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 628 -TPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAK 666
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K +++ D F ++ +R Y PI LDF SLYPS+
Sbjct: 543 SQLLRKAKQKNLVIPNIKGQAS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 598
Query: 128 IIAYNYCFST 137
++AYN C+ T
Sbjct: 599 MMAYNLCYCT 608
>gi|115484523|ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
Japonica Group]
gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
Length = 1105
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 57/400 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P IQ+ N V+ E + F + ++ P ++G ++ +F
Sbjct: 325 GRKGHFPEPTHDPVIQIANLVTLQGEGQPFVRNVMTLKSCSP--IVGVDVMSFD------ 376
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--- 405
E+++ + + +R+ DPDI+IGY I YL+ER VL + L RI
Sbjct: 377 -----TERDVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRIRNS 431
Query: 406 ------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
T R E K+ ++ GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 432 RVRVRDTTFSSRQYGMRESKDVAVE--GRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQ 489
Query: 460 IP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS L E R L + + YL + RL+++L +I EMAR+ G
Sbjct: 490 KEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQ-----RLLDKLMYIYNYVEMARVTG 544
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG +V S +LR ++ N V P+IK +A + +LE + Y
Sbjct: 545 VPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNIKGQASGQDTFEGATVLEARAGFYEK 602
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++AYN C+ T + P LN+ S+ K
Sbjct: 603 PIATLDFASLYPSIMMAYNLCYCTLVP-----------PEDARKLNLPPESVNK------ 645
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 646 -TPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAK 684
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K +++ D F ++ +R Y PI LDF SLYPS+
Sbjct: 561 SQLLRKAKQKNLVIPNIKGQAS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 616
Query: 128 IIAYNYCFST 137
++AYN C+ T
Sbjct: 617 MMAYNLCYCT 626
>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
[Tribolium castaneum]
Length = 1172
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 162/345 (46%), Gaps = 47/345 (13%)
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
G+ R F E E+ + E VR+ DPDI GY I + YL+ER L L L
Sbjct: 308 GHAEVRSF-DTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLKRFDYLG 366
Query: 404 RITEVEKRNSSRDEVKNTQL--------QMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
RI ++ R+S ++ V T++ GR+ ++ +++ + L+SYT ++ +
Sbjct: 367 RILDI--RSSIKETVTQTKIGKRTFKSINFEGRVAYDMLMVIKRDFKLRSYTLNSVSQEI 424
Query: 456 LHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLF 514
L E+ + ++T + + V Y ++ + +R++ + EMAR+
Sbjct: 425 LGEQKEDVHYSVITDLQNGDEQTRRRLAV--YCLKDADLPVRILSTVRSFTNDVEMARVT 482
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPES----LPLILEPES 570
G+ +L++G Q +V + +L+ +R + + H AP S ++EP
Sbjct: 483 GVPITSLLTKGEQVKVVAQLLKHARAAGYFMPT-------HQGAPSSEQYEGATVIEPRR 535
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV--EHLGVSDSFPFGCIDLNVSIRSLK 628
YTDPI LDF SLYPS++IA+N C++T + E L +SD
Sbjct: 536 GYYTDPIATLDFSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSD----------------- 578
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ +T +P+ FV S+R G+LP +LQ +L R K +KE
Sbjct: 579 ---EQVTTTPANCMFVKSSVRPGLLPHILQHLLAARKKTKAELKE 620
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R YTDPI LDF SLYPS++IA+N C++T +
Sbjct: 534 RRGYYTDPIATLDFSSLYPSIMIAHNLCYTTLI 566
>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
Length = 1092
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 196/444 (44%), Gaps = 76/444 (17%)
Query: 256 SRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRTKPI- 306
SR L+ D AYD+ ++ P E KV + I G++ PE + P+
Sbjct: 270 SRCQLEVDVAYDQ------FISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKVDPVI 323
Query: 307 ---QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
M E E F + +++ P +IG ++ F+ E +L +
Sbjct: 324 QIANMVIRQGETEPFIRNVFTLKECAP--IIGSQVLCFA-----------QETQLLDKWG 370
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV----- 418
VR+ DPDIL GY I YLL R L + + L RI + R+ +++V
Sbjct: 371 AFVREVDPDILTGYNINNFDVPYLLNRAAHLKVKNFEYLGRIKNI--RSVIKEQVLQSKQ 428
Query: 419 ----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
+N + GR+ +L+ +L + L+SYT + YH L E+ ++T
Sbjct: 429 MGRRENQYVNFEGRVPFDLFFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITDLQNG 488
Query: 473 --EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ R L + + YL +RL+ +L I EMAR+ G+ +L+RG Q +V
Sbjct: 489 DEQTRRRLAMYCLKDAYLP-----LRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKV 543
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S +LR ++ F+ PS E +I EP+ Y DPI LDF SLYPS++
Sbjct: 544 LSQLLRKAKTRGFIM--PSYTSSGSDEQYEGATVI-EPKRGYYADPISTLDFASLYPSIM 600
Query: 591 IAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+A+N C++T L G + LG+SD + +P+ FV +
Sbjct: 601 MAHNLCYTTLLLPGAKDKLGLSDD--------------------QVERTPANNLFVKAEL 640
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP++L+ +L R K +K
Sbjct: 641 RRGLLPEILESLLAARKRAKNDLK 664
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y DPI LDF SLYPS+++A+N C++T L G + LG+SD
Sbjct: 583 YADPISTLDFASLYPSIMMAHNLCYTTLLLPGAKDKLGLSD 623
>gi|255549385|ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 163/339 (48%), Gaps = 48/339 (14%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
E+++ + + +R+ DPDI+IGY I YL+ER LG+ L R+ RNS
Sbjct: 296 TERKVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAETLGIAEFPVLGRV-----RNS 350
Query: 414 SRDEVKNT-------------QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
R VK+T ++ + GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 351 -RVRVKDTTFSSRQYGTRESKEVTLEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLSEQK 409
Query: 461 P--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS L E R L + + YL + RL+++L +I EMAR+ G+
Sbjct: 410 EDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMYIYNYVEMARVTGV 464
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+LSRG +V S +LR ++ N V P++KQ + +LE + Y P
Sbjct: 465 PMSFLLSRGQSIKVLSQLLRKAKQKNLVI--PNVKQAGSEQGSYEGATVLEANAGFYEKP 522
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS+++AYN C+ T + P LN+ + K
Sbjct: 523 IATLDFASLYPSIMMAYNLCYCTLVT-----------PEDVRKLNLPPECVNK------- 564
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV +++ GILP++L+E+L R K +KE K
Sbjct: 565 TPSGETFVKPNLQKGILPEILEELLAARRRAKADLKEAK 603
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++AYN C+ T
Sbjct: 518 FYEKPIATLDFASLYPSIMMAYNLCYCT 545
>gi|402586872|gb|EJW80809.1| hypothetical protein WUBG_08282 [Wuchereria bancrofti]
Length = 522
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL----GVSD 611
M +PE+LPL +EPES Y DP+IVLDFQSLYPS+IIAYNYCF+TC G+V H+
Sbjct: 1 MCSPETLPLTMEPESGFYRDPVIVLDFQSLYPSIIIAYNYCFTTCFGKVSHIENICTADK 60
Query: 612 SFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQ 669
FG ++ N I + + L +SP+G F K +R G++P ML+EILDTR+MVK+
Sbjct: 61 IIEFGGLEYNCPIDDIVLMFTTNKLHVSPTGAIFCRKDVRKGLMPVMLEEILDTRVMVKK 120
Query: 670 SMKEYKFSESLRNLTMLNSMLL 691
+ KE K L + M L
Sbjct: 121 AAKECKNDRRLARILEARQMAL 142
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 32/36 (88%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+IVLDFQSLYPS+IIAYNYCF+TC G+V H+
Sbjct: 17 FYRDPVIVLDFQSLYPSIIIAYNYCFTTCFGKVSHI 52
>gi|242018791|ref|XP_002429857.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212514875|gb|EEB17119.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1096
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 158/328 (48%), Gaps = 35/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV------ 408
E EL + E VRQ DPDI GY I + YL+ R L +N L RI ++
Sbjct: 366 ETELLKSWGEFVRQVDPDICTGYNISNFDFPYLINRAKHLNVNDFCFLGRIKDIKSVVKD 425
Query: 409 ---EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ + R E KNT ++ GR+ +L +L + L+SYT + YH L E+
Sbjct: 426 SVLQSKQLGRRENKNTNIE--GRVTFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHH 483
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RLIE+L EMAR+ G+ +L+R
Sbjct: 484 SIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLIEKLMCFINYMEMARVTGVPLSCLLTR 541
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR ++ +++ P+ E +I EP+ Y DPI LDF S
Sbjct: 542 GQQIKVVSQLLRKTKEKHYLM--PTHNSVGSDEQFEGATVI-EPKKGYYPDPIATLDFSS 598
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L GV + LN+ + +PS FV
Sbjct: 599 LYPSIMMAHNLCYTTLL----RPGVKEK-------LNLE-------PDKYSTTPSNHFFV 640
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMK 672
KSIR G+LP++L+ +L R K +K
Sbjct: 641 KKSIRKGLLPEILENLLTARKKAKTDLK 668
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+++A+N C++T L
Sbjct: 587 YPDPIATLDFSSLYPSIMMAHNLCYTTLL 615
>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
Length = 1036
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 179/390 (45%), Gaps = 44/390 (11%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + ++ FI N+ D +IG ++ F
Sbjct: 253 GRKGVFPEPNHDPVIQIANMVIKQGSAEPFIRNIFTLDTCAPIIGSQVLCFD-------- 304
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E EL + VR+ DPDI GY I + YL+ R L + L RI +++
Sbjct: 305 ---KETELLKKWAAFVREVDPDIFTGYNINNFDFPYLINRAKHLNVQDFVYLGRIKDIKS 361
Query: 411 -------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++ +N + GR+ +L +L + L+SY+ + YH L E+
Sbjct: 362 VIKDSFLQSKQMGRRENKSINFEGRVPFDLLLVLTRDYKLRSYSLNAVSYHFLQEQKEDV 421
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + H + + V Y ++ + +RL+++L I EMAR+ G+ +L
Sbjct: 422 HHSIISELQQGGPHTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVALPSLL 479
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V S +LR +R F+ P+ E +I EP Y DPI LDF
Sbjct: 480 TRGQQIKVLSQLLRKTREKGFLM--PAYHGTGGDDQYEGATVI-EPRKGYYADPIATLDF 536
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+++A+N C++T L GV + +DL+ T +P+
Sbjct: 537 SSLYPSIMMAHNLCYTTLL----QGGVKEK-----LDLSTD---------QYTKTPAQNY 578
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV KS+R G+LP++L+ +LD R K +K
Sbjct: 579 FVHKSVRKGLLPEILENLLDARKKAKADLK 608
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
R Y DPI LDF SLYPS+++A+N C++T L G E L +S
Sbjct: 523 RKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLQGGVKEKLDLS 566
>gi|47219672|emb|CAG02717.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1008
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 32/329 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT------ 406
+ E +L + E +R DPDI+ GY I+ + YLL R L + L L R+
Sbjct: 279 TQENKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVQLFPYLGRVRSSKSVL 338
Query: 407 -EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ ++ +N + M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 339 RDLNFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQH 398
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + EMAR+ G+ +LSR
Sbjct: 399 SIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLLSR 456
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR + + V P +K + ++EPE Y+ PI LDF S
Sbjct: 457 GQQIKVVSQLLRQAMKQDLVM--PVVKTEGG--EDYTGATVIEPEKGYYSIPIATLDFSS 512
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + G D + +++ +P+G FV
Sbjct: 513 LYPSIMMAHNLCYTTLLQK----GAQDKYSLS--------------REDFIKTPTGDLFV 554
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S+R G+LP++L+ +L R K +K+
Sbjct: 555 KSSVRKGLLPEILENLLSARKRAKAELKK 583
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKD 169
Y+ PI LDF SLYPS+++A+N C++T L + G D + SRE P D
Sbjct: 501 YSIPIATLDFSSLYPSIMMAHNLCYTTLLQK----GAQDKYSL----SREDFIKTPTGD 551
>gi|406607376|emb|CCH41280.1| DNA polymerase delta catalytic subunit [Wickerhamomyces ciferrii]
Length = 1108
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 37/331 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELS 403
+E+++ + + V + DPD++IGY YLL+R LGL N+ QE
Sbjct: 377 DERDMLLEWKDFVNKVDPDVIIGYNTTNFDLPYLLDRAKALGLRDFPYFGRLINIKQEAK 436
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
K +R+ + + + GR+ ++L + ++ E L+SYT ++ H L+E+
Sbjct: 437 DSVFSSKAYGTRE---SKSINIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLNEQKEEV 493
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + + V Y ++ + +RL+E+L + +EMAR+ G+ F +L
Sbjct: 494 QHSIITDLQNGNSETRRRLAV--YCLKDAYLPMRLLEKLMCLVNYTEMARVTGVPFSFLL 551
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V S + R + V P+++Q ++EP Y PI LDF
Sbjct: 552 TRGQQIKVISQLFR--KCLEIDLVVPNLQQGGSSDVQYEGATVIEPHRGYYDVPIATLDF 609
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGV 641
SLYPS+++A+N C++T L + +I LK + ++ T+SPSG
Sbjct: 610 SSLYPSIMMAHNLCYTTLLNK------------------PTIERLKLEKDKDYTVSPSGD 651
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S R GILP +L+E+L R K+ MK
Sbjct: 652 FFVKTSQRKGILPIILEELLSARKKAKKDMK 682
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 600 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNK 630
>gi|389582837|dbj|GAB65574.1| DNA polymerase zeta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1349
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 150/297 (50%), Gaps = 43/297 (14%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H NE++L I+ + + P ++ YE + + Y+ +R L + S T +
Sbjct: 126 HIAQNERDLIKKLIDKINFYSPLSIVSYENDKYNISYINQRCVALDMG-----SFYTHIS 180
Query: 410 KRNSSRD--EVKNT-QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K N R+ E+ N + + GR++ +L++L ++ + +FEN+ H L+ +P S
Sbjct: 181 KLNDQREFTELNNAYNINIKGRLIESLYKL----SSVSNTSFENLCKHYLNVNVPSISRH 236
Query: 467 LLTCWWEHRT-------------------------------HLYKWMTVEHYLIRVTGII 495
L CW+ + + + Y+ +TV +YL +V+ ++
Sbjct: 237 TLYCWYSYASRESRNDGTGAGESGRGGGVVSDSVIGGEPPFYPYRHLTVRYYLKKVSLLL 296
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
+ +++ ++ + + + +++RGSQF +ES +++L N F+ SPS K+
Sbjct: 297 LIYDKIGYLKKKMNFCKYIHVDLLSLINRGSQFIIESFLVKLCMRNGFLLYSPSDKEIME 356
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 612
R +PL+L+P+S + P++V DFQSLYPS++IA+N C+STCLG + SD+
Sbjct: 357 QRPILHIPLVLQPKSSINFFPLLVFDFQSLYPSIVIAFNICYSTCLGTLSFKRRSDA 413
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
P++V DFQSLYPS++IA+N C+STCLG + SD+
Sbjct: 377 PLLVFDFQSLYPSIVIAFNICYSTCLGTLSFKRRSDA 413
>gi|195997435|ref|XP_002108586.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
gi|190589362|gb|EDV29384.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
Length = 1050
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 169/361 (46%), Gaps = 36/361 (9%)
Query: 325 VRQWDPDILIGYEIETFSWGYLL--ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETL 382
+RQ D + I T S ++ + H S EKE+ + E + DPDI+ GY +
Sbjct: 291 IRQGDYEPFIKNIFTTQSSANIVGCQLHTFSKEKEMLKAWHEFFLEVDPDIITGYNVVNS 350
Query: 383 SWGYLLERGYVLGLNLNQELSRITEVEKRNSSR-------DEVKNTQLQMPGRIVINLWR 435
S YLL R LG+ L RIT + + SS + +N + + GR+ +L
Sbjct: 351 SLPYLLNRSKALGIEKFSHLGRITNEKTQISSNTFQSRAYGKRENKVMNISGRVQFDLLH 410
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI- 494
L + L+SY+ + +H L E+ L ++ + + + Y ++ +
Sbjct: 411 ALLRDYKLRSYSLNAVTFHFLKEQKELLQPSVIADLLRGNDRSRRRLAI--YCLKNASLP 468
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
I+L+++L I EMAR+ G+ +L+RG Q +V S +LR ++ + + +A
Sbjct: 469 IKLLDKLMCIINYMEMARVTGVPLGCLLTRGQQIKVVSQLLRYAKEEKMLMPA----HKA 524
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
+ +++EP Y PI LDF SLYPS++ A+N C++T L +H +S+ P
Sbjct: 525 EAGDDYTGAIVIEPVRGYYDCPIATLDFSSLYPSIMQAHNLCYTTLL---QHHHLSNLSP 581
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
I +PSG FV K++R GILPK+LQ +L R K +K
Sbjct: 582 DDYIK-----------------TPSGNYFVKKNLRAGILPKILQNLLSARKKAKFDLKNE 624
Query: 675 K 675
K
Sbjct: 625 K 625
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
Y PI LDF SLYPS++ A+N C++T L +H +S+ P I + N
Sbjct: 543 YDCPIATLDFSSLYPSIMQAHNLCYTTLL---QHHHLSNLSPDDYIKTPSGN 591
>gi|334188613|ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|332010439|gb|AED97822.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1112
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 40/323 (12%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--TEVEKRNS---SRD---- 416
+R DPDI+IGY I YL+ER LG+ L R+ + V R+S SR
Sbjct: 398 IRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRVKNSRVRVRDSTFSSRQQGIR 457
Query: 417 EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW---- 472
E K T ++ GR +L + + + L SY+ ++ H L E+ ++T
Sbjct: 458 ESKETTIE--GRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSEQKEDVHHSIITDLQNGNA 515
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
E R L + + YL + RL+++L FI EMAR+ G+ +L+RG +V S
Sbjct: 516 ETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMARVTGVPISFLLARGQSIKVLS 570
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+LR + N V P+ KQ + +LE + Y PI LDF SLYPS+++A
Sbjct: 571 QLLRKGKQKNLVL--PNAKQSGSEQGTYEGATVLEARTGFYEKPIATLDFASLYPSIMMA 628
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
YN C+ T + + +R L +++T +PSG FV ++++ GI
Sbjct: 629 YNLCYCTLVTPED------------------VRKLNLPPEHVTKTPSGETFVKQTLQKGI 670
Query: 653 LPKMLQEILDTRLMVKQSMKEYK 675
LP++L+E+L R K +KE K
Sbjct: 671 LPEILEELLTARKRAKADLKEAK 693
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 604 ARTGFYEKPIATLDFASLYPSIMMAYNLCYCT 635
>gi|190340064|gb|AAI63875.1| Polymerase (DNA directed), delta 1, catalytic subunit [Danio rerio]
Length = 1105
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 40/333 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI------- 405
+ EK + + E +R DPDI+ GY I+ YLL R L +N+ L R+
Sbjct: 376 TQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGRVWGCKSVL 435
Query: 406 --TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + + R E N + M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 436 KDSSFQSKQMGRRE--NKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDV 493
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+++L + EMAR+ G+ +L
Sbjct: 494 QHSIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLL 551
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q +V S +LR + + V P +K + ++EPE Y+ PI LDF
Sbjct: 552 SRGQQIKVVSQLLRQAMKQDLVM--PVVKTEGG--EDYTGATVIEPEKGYYSVPIATLDF 607
Query: 583 QSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS+++A+N C++T L ++E LG+ + +P+G
Sbjct: 608 SSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPD--------------------DFIKTPTG 647
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+R G+LP++L+ +L R K +K+
Sbjct: 648 DLFVKSSVRKGLLPEILENLLSARKRAKAELKK 680
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y+ PI LDF SLYPS+++A+N C++T L ++E LG+ D F
Sbjct: 598 YSVPIATLDFSSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPDDF 641
>gi|89886293|ref|NP_001034899.1| DNA polymerase delta catalytic subunit [Danio rerio]
gi|58615463|gb|AAW80296.1| DNA polymerase delta1 catalytic subunit [Danio rerio]
Length = 1105
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 40/333 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI------- 405
+ EK + + E +R DPDI+ GY I+ YLL R L +N+ L R+
Sbjct: 376 TQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGRVWGCKSVL 435
Query: 406 --TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + + R E N + M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 436 KDSSFQSKQMGRRE--NKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDV 493
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+++L + EMAR+ G+ +L
Sbjct: 494 QHSIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLL 551
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q +V S +LR + + V P +K + ++EPE Y+ PI LDF
Sbjct: 552 SRGQQIKVVSQLLRQAMKQDLVM--PVVKTEGG--EDYTGATVIEPEKGYYSVPIATLDF 607
Query: 583 QSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS+++A+N C++T L ++E LG+ + +P+G
Sbjct: 608 SSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPD--------------------DFIKTPTG 647
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+R G+LP++L+ +L R K +K+
Sbjct: 648 DLFVKSSVRKGLLPEILENLLSARKRAKAELKK 680
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y+ PI LDF SLYPS+++A+N C++T L ++E LG+ D F
Sbjct: 598 YSVPIATLDFSSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPDDF 641
>gi|242060584|ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 187/401 (46%), Gaps = 59/401 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENV---RQWDPDILIGYEIETFSWGYLL 347
G++ PE P IQ+ N V+++ E F++NV + P ++G ++ +F
Sbjct: 321 GRKGHFPEPTHDPVIQIANLVTHQGE-GQPFVQNVMTLKSCSP--IVGVDVMSFDA---- 373
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-- 405
E+++ + +R+ DPDI+IGY I YL+ER VL + L RI
Sbjct: 374 -------ERDILLAWRNFIREVDPDIIIGYNICKFDMPYLIERAEVLKIAEFPILGRIRN 426
Query: 406 -------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
T R E K+ ++ GR+ +L + ++ + L SY+ ++ H L E
Sbjct: 427 SRVRVRDTTFSSRQYGVRESKDVTIE--GRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGE 484
Query: 459 RIP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ HS L E R L + + YL + RL+++L +I EMAR+
Sbjct: 485 QKEDVHHSIISDLQNGNPETRRRLAVYCLKDAYLPQ-----RLLDKLLYIYNYVEMARVT 539
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ +LSRG +V S +LR ++ N V P+IK + + +LE + Y
Sbjct: 540 GVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNIKGQGSGQDTFEGATVLEARAGFYE 597
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
PI LDF SLYPS+++AYN C+ T + P LN+ S+ K
Sbjct: 598 KPIATLDFASLYPSIMMAYNLCYCTLVP-----------PEDARKLNLPPESINK----- 641
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 642 --TPSGEIFVKPELQKGILPEILEELLAARKRAKADLKEAK 680
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K + + D F ++ +R Y PI LDF SLYPS+
Sbjct: 557 SQLLRKAKQKNLVIPNIKGQGS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 612
Query: 128 IIAYNYCFST 137
++AYN C+ T
Sbjct: 613 MMAYNLCYCT 622
>gi|322801992|gb|EFZ22529.1| hypothetical protein SINV_03834 [Solenopsis invicta]
Length = 1072
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 176/393 (44%), Gaps = 48/393 (12%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G+E PE + P+ M E E F I + P ++G ++ +F+
Sbjct: 289 GREGIFPEAKHDPVIQIANMVIRQGEPEPFLRNIFTLDTCAP--IVGSQVLSFN------ 340
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E + + + VRQ DPDI GY I + YL+ R L + L RI +
Sbjct: 341 -----TESLMLEKWADFVRQSDPDIFTGYNINNFDFPYLINRAQHLNVKNFNFLGRIKNI 395
Query: 409 EK-------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ ++ +N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 396 KSVIKDHVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKE 455
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
K +T + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 456 DVQHKDITGLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSISS 513
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR ++ +++ + Q ++EP+ Y DPI L
Sbjct: 514 LLTRGQQIKVVSQLLRKTKEKDYLM---PVHQGHGTDEQFEGATVIEPKRGYYNDPIATL 570
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+I+A+N C++T L + +LN+ + +T +PS
Sbjct: 571 DFSSLYPSIIMAHNLCYTTLLTVAKKK-----------ELNIQ-------EDQITTTPSN 612
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F+ +IR GILP++L+ +L R K +K+
Sbjct: 613 SLFIKSTIRKGILPEILENLLSARKKAKAELKQ 645
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R K D P + T F+ + Y DPI LDF SLYPS+I+A
Sbjct: 525 SQLLRKTKEKDYLMPVHQGHGTDEQFEGATV--IEPKRGYYNDPIATLDFSSLYPSIIMA 582
Query: 131 YNYCFSTCL 139
+N C++T L
Sbjct: 583 HNLCYTTLL 591
>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
Length = 1100
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 156/335 (46%), Gaps = 46/335 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV----- 408
+E+EL + VR+ DPDIL GY I YLL R L + + L R+T +
Sbjct: 368 SEQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRANHLKVKNFEYLGRVTNIRSVIK 427
Query: 409 ----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ + R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 428 ETVIQSKQMGRRE--NKSVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVH 485
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + R L + + YL +RL+ +L I EMAR+ G+
Sbjct: 486 HSIITDLQNENEQTRRRLAMYCLKDAYLP-----LRLLNKLMCIVNYMEMARVTGVPLQC 540
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR +R ++ PS + E +I EP+ Y DPI L
Sbjct: 541 LLTRGQQIKVMSQLLRKTRKCGYLI--PSYQSSGSDEQYEGATVI-EPKRGYYADPISTL 597
Query: 581 DFQSLYPSVIIAYNYCFSTCLG---RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
DF SLYPS+++A+N C++T L E LG++D +T +
Sbjct: 598 DFASLYPSIMMAHNLCYTTLLQPGFNKEKLGLTDD--------------------QITRT 637
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P+ FV S+R GILP++L+ +L R K +K
Sbjct: 638 PANNTFVKASVRKGILPEILESLLGARKRAKADLK 672
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG---RVEHLGVSD 149
Y DPI LDF SLYPS+++A+N C++T L E LG++D
Sbjct: 590 YADPISTLDFASLYPSIMMAHNLCYTTLLQPGFNKEKLGLTD 631
>gi|383855586|ref|XP_003703291.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Megachile
rotundata]
Length = 1091
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 33/359 (9%)
Query: 325 VRQWDPDILIGYEIETFSWGYLLERHFVSNEKE--LFSIFIENVRQWDPDILIGYEIETL 382
++Q DP+ + + ++ +S +KE L + + VRQ DPDI GY I
Sbjct: 329 IKQGDPEPFLRNIFTLDTCAPIVGSQVLSFDKEQMLLEKWADFVRQLDPDIFTGYNINNF 388
Query: 383 SWGYLLERGYVLGLNLNQELSRITEVEK-------RNSSRDEVKNTQLQMPGRIVINLWR 435
+ YL+ R L + L RI ++ ++ +N + GR+ +L+
Sbjct: 389 DFPYLINRAQHLNVKDFNFLGRIKNIKSVIKTKVIQSKQMGRRENKSVNFEGRVPFDLYL 448
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI- 494
+L + L+SYT + YH L E+ ++T + + V Y ++ +
Sbjct: 449 VLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITELQNGNPQTRRRLAV--YCLKDAYLP 506
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
+RL+++L I EMAR+ G+ +L+RG Q +V S +LR + +++ P + +
Sbjct: 507 LRLLDKLMCIFIYMEMARVTGVSIASLLTRGQQIKVVSQLLRKIKDRDYLM--PGHQGQG 564
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
E +I EP+ Y DPI LDF SLYPS+I+A+N C++T L
Sbjct: 565 GDEQYEGATVI-EPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLN------------ 611
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
N S K N+T +PS F+ ++R GILP++L+ +L R + K +K+
Sbjct: 612 ------NESQHKYKIDPDNVTRTPSNSMFIKANVRKGILPEILENLLTARKVAKAELKK 664
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+I+A+N C++T L
Sbjct: 582 YNDPIATLDFSSLYPSIIMAHNLCYTTLL 610
>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
Length = 1095
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 197/444 (44%), Gaps = 76/444 (17%)
Query: 256 SRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRTKPI- 306
SR L+ D AYD+ ++ P E KV + I G+ PE + P+
Sbjct: 273 SRCQLEVDVAYDQ------FISHEPEGEWSKVAPLRILSFDIECAGRRGIFPEAKMDPVI 326
Query: 307 ---QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
M E E F + ++Q P +IG ++ + E +L +
Sbjct: 327 QIANMVIRQGESEPFIRNVFTLKQCAP--IIGSQVLCYD-----------QETQLLDKWA 373
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV----- 418
VR+ DPDIL GY I YLL R L +N + L RI + R+ +++V
Sbjct: 374 AFVREVDPDILTGYNINNFDIPYLLNRAAHLKVNNFEYLGRIRNI--RSVIKEQVLQSKQ 431
Query: 419 ----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
+N + GR+ +L+ +L + L+SY+ + YH L E+ ++T
Sbjct: 432 MGRRENHYVNFEGRVPFDLYLVLLRDYKLRSYSLNAVSYHFLQEQKEDVHHSIITDLQNG 491
Query: 473 --EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ R L + + YL +RL+ +L I EMAR+ G+ +L+RG Q +V
Sbjct: 492 DEQTRRRLAMYCLKDAYLP-----LRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKV 546
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S +LR ++ F+ PS E +I EP+ Y DPI LDF SLYPS++
Sbjct: 547 LSQLLRKAKTKGFIM--PSYTSSGSDEQYEGATVI-EPKRGYYADPISTLDFASLYPSIM 603
Query: 591 IAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+A+N C++T L G + +G+ D +++Q +P+ FV +
Sbjct: 604 MAHNLCYTTLLLPGAKDKMGLRDD----------------QVEQ----TPANNRFVKAEL 643
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP++L+ +L R K +K
Sbjct: 644 RRGLLPEILESLLAARKRAKNDLK 667
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y DPI LDF SLYPS+++A+N C++T L G + +G+ D
Sbjct: 586 YADPISTLDFASLYPSIMMAHNLCYTTLLLPGAKDKMGLRD 626
>gi|342179963|emb|CCC89437.1| putative DNA polymerase delta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1026
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 169/343 (49%), Gaps = 53/343 (15%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL---------GLNLNQ 400
H E+E+ ++ V++ DPDIL GY + + YLL+RG L G +N+
Sbjct: 291 HSYETEEEMLLAWLRFVKEIDPDILTGYNVCKFDFPYLLDRGSTLKVSEAFHYWGRQINE 350
Query: 401 ELSRITEVEKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
R EK+ SR ++ N T+L M GR++++ +++ + L++Y+ + H L
Sbjct: 351 ---RTVHREKKFQSR-QMGNREYTELTMEGRVIMDAMSVIQRDYKLRAYSLNAVSQHFLG 406
Query: 458 ERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
E+ +++ E R L + + YL ++L+++L + EMAR+
Sbjct: 407 EQKEDVHHSIISDLQQGNDETRRRLAVYCLKDAYLP-----VKLLDRLMVVVNNVEMARV 461
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVS---PSIKQRAHMRAPESLPLILEPES 570
G+ +L RG Q +V S++LR +R N V + I QR + A ++EP
Sbjct: 462 TGVPIAWLLERGQQIKVFSMLLRKARARNLVVPTTENSGIDQRGYEGA-----TVIEPRK 516
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y PI+ LDF SLYPS+IIA+N C+ST + + E +D +
Sbjct: 517 GFYNCPIVTLDFASLYPSIIIAHNLCYSTLVRQSE----ADKYD---------------- 556
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ ++ +P+G FV ++ GILP++LQ++L R + MK+
Sbjct: 557 KDMISRTPTGHVFVRDNVFPGILPEVLQDLLAARKNARTLMKD 599
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 65 VKCFEESSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQ 121
+K F S L R + + PT +N S D + ++ R Y PI+ LDF
Sbjct: 476 IKVF--SMLLRKARARNLVVPTTEN----SGIDQRGYEGATVIEPRKGFYNCPIVTLDFA 529
Query: 122 SLYPSVIIAYNYCFSTCLGRVE 143
SLYPS+IIA+N C+ST + + E
Sbjct: 530 SLYPSIIIAHNLCYSTLVRQSE 551
>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
Length = 1092
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 193/444 (43%), Gaps = 76/444 (17%)
Query: 256 SRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRTKPI- 306
SR ++ D AYD+ ++ P E KV + I G++ PE + P+
Sbjct: 270 SRCQIEVDVAYDQ------FISHEPEGEWSKVAPLRILSFDIECAGRKGIFPEAKMDPVI 323
Query: 307 ---QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFI 363
M E E F + ++Q P +IG ++ ++ E +L +
Sbjct: 324 QIANMVIRQGESEPFIRNVFTLKQCAP--IIGSQVLSYD-----------QETQLLDKWS 370
Query: 364 ENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSS 414
VR+ DPDIL GY I YLL R L + + L RI + + +
Sbjct: 371 AFVREVDPDILTGYNINNFDIPYLLNRAAHLKVKNFEYLGRIKNIRSVIKEQMLQSKQMG 430
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
R E N + GR+ +L+ +L + L+SYT + YH L E+ ++T
Sbjct: 431 RRE--NQYVNFEGRVPFDLFLVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITDLQNG 488
Query: 473 --EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ R L + + YL +RL+ +L I EMAR+ G+ +L+RG Q +V
Sbjct: 489 DEQTRRRLAMYCLKDAYLP-----LRLLGKLMAIVNYMEMARVTGVPLESLLTRGQQIKV 543
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S +LR ++ F+ PS E +I EP+ Y DPI LDF SLYPS++
Sbjct: 544 LSQLLRKAKTKGFIM--PSYTSSGSDEQYEGATVI-EPKRGYYADPISTLDFASLYPSIM 600
Query: 591 IAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+A+N C++T L G + +G++D + +P+ FV +
Sbjct: 601 MAHNLCYTTLLLPGTKDKMGLTDD--------------------QVERTPANNVFVKAEL 640
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP++L+ +L R K +K
Sbjct: 641 RRGLLPEILESLLAARKRAKNDLK 664
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y DPI LDF SLYPS+++A+N C++T L G + +G++D
Sbjct: 583 YADPISTLDFASLYPSIMMAHNLCYTTLLLPGTKDKMGLTD 623
>gi|340380252|ref|XP_003388637.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Amphimedon queenslandica]
Length = 777
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 46/390 (11%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + + + FI NV ++G ++ +F+
Sbjct: 303 GRKGVFPEADVDPVIQIANMIQVQGDPAPFIRNVFTLGSCSGIVGSDVRSFA-------- 354
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
NEK+L + E +++ DPDIL GY I YL+ R L L L R T
Sbjct: 355 ---NEKDLLQSWCEFLQETDPDILTGYNIVNFDLPYLINRAKALKLQQFPYLGRTTSAMT 411
Query: 411 -------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + + +N + + GR+ +L ++L + L+SY+ ++ YH L E+
Sbjct: 412 VIKTSTFESKAYGKRENKLINISGRVQFDLLQVLFRDTKLRSYSLNSVSYHFLKEQKEDV 471
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+E+L + EMAR+ G+ +L
Sbjct: 472 PHNIITDLQNGNEDSRRRLAV--YCMKDAILPLRLLEKLMSLINYIEMARVTGVPLNYLL 529
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V S +LR ++ ++ + P IK + ++EP+ Y+ PI VLDF
Sbjct: 530 TRGQQIKVVSQLLRKAKKHDLLM--PVIKSESQEEYLGGH--VIEPQRGYYSSPISVLDF 585
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS++ A+N C++T + R NV L ++ +PSG
Sbjct: 586 SSLYPSIMQAHNLCYTTLILR-----------------NVDRDKLDP--EDYIKTPSGNY 626
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +S+R GILP++L+++L R KQ +K
Sbjct: 627 FVKESVRRGILPEILEDLLSARKKAKQELK 656
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y+ PI VLDF SLYPS++ A+N C++T + R
Sbjct: 576 YSSPISVLDFSSLYPSIMQAHNLCYTTLILR 606
>gi|268557320|ref|XP_002636649.1| Hypothetical protein CBG23360 [Caenorhabditis briggsae]
Length = 1081
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 161/339 (47%), Gaps = 52/339 (15%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NEK L + E VR+ DPDI+ GY I Y+L+R VL L L R + +K +
Sbjct: 343 NEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR--QRDKGSV 400
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER----- 459
RD N + + GRI+ ++ +++ + L+SYT ++ Y L E+
Sbjct: 401 VRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVE 460
Query: 460 ---IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
IP L + R L ++ + YL +RL+++L I EMAR+ G+
Sbjct: 461 HNIIP----DLQRGDEQTRRRLAQYCLKDAYLP-----LRLLDKLMSIINYIEMARVTGV 511
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+L++G Q ++ S+MLR + NNF P I+ + +++P Y +P
Sbjct: 512 PMNFLLTKGQQIKILSMMLRRCKQNNFFL--PVIEANSGDGEGYEGATVIDPIRGFYNEP 569
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS++IA+N C++T L + GV + ++
Sbjct: 570 IATLDFASLYPSIMIAHNLCYTTLLKSPQ--GVEN--------------------KDYIR 607
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG F KS R G+LP++L+++L R K MK K
Sbjct: 608 TPSGQYFATKSKRRGLLPEILEDLLAARKRAKNDMKNEK 646
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 94 SSFDSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+S D + + ++ D + Y +PI LDF SLYPS++IA+N C++T L
Sbjct: 546 NSGDGEGYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL 594
>gi|324120702|dbj|BAJ78742.1| DNA polymerase delta catalytic subunit [Isonychia japonica]
Length = 1008
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 61/400 (15%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWG---YLLE 348
G++ PE + P IQ+ V + FI+NV F+ G ++
Sbjct: 222 GRKGIFPEPQHDPVIQIANVVINQGAAEPFIKNV---------------FTLGECAAIVG 266
Query: 349 RHFVSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT 406
H +S++ E L + +R+ DPDI+ GY I YLL R LG L RI
Sbjct: 267 THVLSHKTEVSLLEQWANFIREVDPDIITGYNINNFDLFYLLSRAKHLGAKNFDFLGRIK 326
Query: 407 EVEKRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
+ ++ ++D V +N ++ M GR++ +L +L + L+SYT + +H L
Sbjct: 327 NI--KSIAKDTVLQSKQMGRRENKKINMEGRVIFDLLLVLLRDYKLRSYTLNAVSFHFLG 384
Query: 458 ERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI 516
E+ ++T + + V Y ++ + ++L+++L I EMAR+ G+
Sbjct: 385 EQKEDVHHSIITDLQNGDDQTRRRLAV--YCVKDAFLPLKLLDKLMCIINYMEMARVTGV 442
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+L+RG Q +V S +LR ++ +++V P R ++EP+ Y P
Sbjct: 443 SLLCLLTRGQQIKVVSQLLRKAKEHDYVI--PVYSVRGGNDEQFEGATVIEPKKGYYKQP 500
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGV-SDSFPFGCIDLNVSIRSLKKLQQN 633
I+ LDF SLYPS+++A+N C++T L G E LG+ SD +
Sbjct: 501 IVTLDFSSLYPSIMMAHNLCYTTLLQPGTKEKLGLTSDQY-------------------- 540
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
T++P+ F+ S R G+LP++L+ +L R K+ +K+
Sbjct: 541 -TVTPNENCFLKASQRKGLLPEILESLLSARKKAKEDLKK 579
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y PI+ LDF SLYPS+++A+N C++T L G E LG++
Sbjct: 497 YKQPIVTLDFSSLYPSIMMAHNLCYTTLLQPGTKEKLGLT 536
>gi|443899075|dbj|GAC76406.1| ribonucleotide reductase, alpha subunit [Pseudozyma antarctica
T-34]
Length = 1160
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 193/398 (48%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E + F++NV + ++G ++ +F+
Sbjct: 380 GRKGVFPEPSVDPVIQIANMVTRQGE-STPFVKNVFTLNTCSHIVGSQVLSFN------- 431
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----LNQELSRI 405
E ++ + + V++ DPD++IGY I + YLL+R L L +E
Sbjct: 432 ----KEIDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDRAKALKSTKFAYLGRERGVR 487
Query: 406 TEVE------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
TE + K +RD KNT+LQ GR+ +++ ++++ + L+SY+ ++ + L E+
Sbjct: 488 TEAKETHFSSKAYGTRDS-KNTELQ--GRLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 544
Query: 460 IPLHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
L+T E R L + + YL + RL+++L EMAR+ G
Sbjct: 545 KEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYIEMARVTG 599
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q +V S + R + +N++ P+ K E +LEP++ Y
Sbjct: 600 VPFNYLLSRGQQIKVVSQLFRKANEDNYLV--PAYKGEGTEDQYEG-ATVLEPKAGYYDR 656
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPSV++A+N C++T L D +DL K ++
Sbjct: 657 PIATLDFASLYPSVMMAHNLCYTTLL---------DKKTIDRLDL--------KQDEDYV 699
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++P+ F K +R G+LP +L+ +L R K +K+
Sbjct: 700 VTPNNNCFATKKLRKGLLPTVLENLLAARKRAKADLKK 737
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMF--PSSSSRDRLYTDPIIVLDFQSLYPSVI 128
S L R D+ P K + T ++ P + DR PI LDF SLYPSV+
Sbjct: 616 SQLFRKANEDNYLVPAYKGEGTEDQYEGATVLEPKAGYYDR----PIATLDFASLYPSVM 671
Query: 129 IAYNYCFSTCLGR 141
+A+N C++T L +
Sbjct: 672 MAHNLCYTTLLDK 684
>gi|281210761|gb|EFA84927.1| DNA polymerase delta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1999
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 35/337 (10%)
Query: 346 LLERHFVS--NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
++ H +S NE +L + + + + DPDI+IGY I YL+ER L + L
Sbjct: 876 IVGAHVISYENEAQLLKEWKKFITKIDPDIIIGYNIANFDLPYLIERARALKIGEFAYLG 935
Query: 404 RI-TEVEKRNSSRDEVKN------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
RI T + K SR +N ++ MPGR ++ + ++ + L SY+ N+ H L
Sbjct: 936 RIKTTISKIKDSRFSSQNLGTRESKEISMPGRTQFDIMQAIQRDHKLSSYSLNNVSAHFL 995
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFG 515
E+ + ++T + + V Y ++ + ++L+++L I SEMAR+ G
Sbjct: 996 KEQKEDVHFSIITDLQNGTDDDRRRLAV--YCLKDAMLPLKLLDKLMLIINYSEMARVTG 1053
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L RG +V S + R + L + + + + + +++EP Y
Sbjct: 1054 VPMSYLLGRGESIKVLSQLYRKAMLEDLILPTQKVTGKGDKFKGA---VVIEPTPGFYDT 1110
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++A+N C+ST + + I++L + T
Sbjct: 1111 PIATLDFTSLYPSIMMAHNLCYSTLITQ------------------DYIKTLPNTE--YT 1150
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++PSG AF+ +I+ G+LP++L+E+L R K+ +K
Sbjct: 1151 VTPSGDAFILPNIKKGLLPRILEELLTARKKAKEELK 1187
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C+ST +
Sbjct: 1107 FYDTPIATLDFTSLYPSIMMAHNLCYSTLI 1136
>gi|241957481|ref|XP_002421460.1| DNA polymerase III, putative; DNA polymerase delta catalytic
subunit, putative [Candida dubliniensis CD36]
gi|223644804|emb|CAX40796.1| DNA polymerase III, putative [Candida dubliniensis CD36]
Length = 1040
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + E + + DPD++IGY Y+L R LGLN R+ V +
Sbjct: 310 EEDMLMHWKEFIIKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV--KQEI 367
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 368 KDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 427
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F +LSR
Sbjct: 428 SIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSR 485
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R N V P++K E +I EPE Y PI LDF S
Sbjct: 486 GQQIKVISQLFRKCLQENIVI--PNLKSEGTNEEYEGATVI-EPERGYYDVPIATLDFSS 542
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + SI++ + + T +P+G FV
Sbjct: 543 LYPSIMMAHNLCYTTLLNK------------------NSIKAFGLTEDDYTKTPNGDYFV 584
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ +R GILP +L E+L R K +K+
Sbjct: 585 NSKLRKGILPTILDELLTARKKAKADLKK 613
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
+R Y D PI LDF SLYPS+++A+N C++T L + ++ G+++
Sbjct: 527 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTE 571
>gi|380019903|ref|XP_003693840.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Apis
florea]
Length = 1105
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 158/327 (48%), Gaps = 31/327 (9%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E ++ + + VRQ DPDI GY I + YL+ R L + L RI ++
Sbjct: 375 EHKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRASHLNVRDFYFLGRIKNIKSVIKT 434
Query: 411 ---RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ +N + GR+ +L +L + L+SYT + YH L E+ +
Sbjct: 435 QVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSI 494
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG
Sbjct: 495 ITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSISSLLTRGQ 552
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR +R +++ P + +A E +I EP+ Y DPI LDF SLY
Sbjct: 553 QIKVVSQLLRKTREKDYLM--PVHRGQASDEQFEGATVI-EPKRGYYNDPIATLDFSSLY 609
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+I+A+N C++T L + +I+S N+TI+P+ F+
Sbjct: 610 PSIIMAHNLCYTTLLKYDKQ-------------TKNNIQS-----DNITITPNDSKFIKA 651
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKE 673
+IR GILP++L+ +L R K +K+
Sbjct: 652 NIRKGILPEILENLLSARKAAKAELKK 678
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + D P + +++ F+ + Y DPI LDF SLYPS+I+A
Sbjct: 558 SQLLRKTREKDYLMPVHRGQASDEQFEGATV--IEPKRGYYNDPIATLDFSSLYPSIIMA 615
Query: 131 YNYCFSTCL 139
+N C++T L
Sbjct: 616 HNLCYTTLL 624
>gi|307110156|gb|EFN58392.1| DNA polymerase delta subunit [Chlorella variabilis]
Length = 1011
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 40/333 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-------NLNQELSRIT 406
+EK L + + V + DPDI+IGY I YLL R L + L R+
Sbjct: 281 DEKALLLRWRDLVLEADPDIIIGYNIVNFDLPYLLNRADTLKIPQFWTWGRLRNRRCRMK 340
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHS 464
+ + + ++ + GR+ +L + ++ + L SY+ ++ H L E+ HS
Sbjct: 341 DARFSSKAYGTHDFKEISIEGRVQFDLLQAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHS 400
Query: 465 --WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
KL E R L + + YL + RL+++L ++ EMAR+ G+ +L
Sbjct: 401 DISKLQDGNAESRRRLAIYCLKDAYLPQ-----RLVDKLMYMYNYVEMARVTGVPMSYLL 455
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVL 580
SRG +V S +LR SR N V P++K+ + +LEP++ Y P+ L
Sbjct: 456 SRGQSIKVFSQILRKSRTKNLVV--PNMKRGGDPNEGVAYEGATVLEPKAGYYDKPVATL 513
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T + + G + FP +++LTISP+G
Sbjct: 514 DFASLYPSIMMAHNLCYTTLVPK----GHENMFP----------------KEHLTISPNG 553
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+ G+LP++LQE+L R ++ M E
Sbjct: 554 DTFVKSSLATGVLPEILQELLAARKRARKDMGE 586
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPNKDS 170
Y P+ LDF SLYPS+++A+N C++T + + G + FP +E PN D+
Sbjct: 506 YDKPVATLDFASLYPSIMMAHNLCYTTLVPK----GHENMFP------KEHLTISPNGDT 555
Query: 171 IHEAEIT 177
++ +
Sbjct: 556 FVKSSLA 562
>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
Length = 1033
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 163/337 (48%), Gaps = 43/337 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+ E+EL + VR+ DPD++ GY I + YL+ R L + L R+ + R+
Sbjct: 303 TEERELLEKWAAFVREVDPDVITGYNINNFDFPYLINRANHLKVKNFTYLGRVKNI--RS 360
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+D+V +N + GR+ +L +L + L+SYT + +H L E+
Sbjct: 361 VIKDQVLQSKQMGRRENKSMNCEGRVPFDLLLILVRDYKLRSYTLNAVSFHFLGEQKEDV 420
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+++L + EM+R+ G+ +L
Sbjct: 421 HHSIITDLQNGNPQTRRRLAV--YCLKDAYLPLRLLDKLMCVINYMEMSRVTGVSLSSLL 478
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q +V S +LR +R ++ A +++ + A ++EP+ Y+DP+ L
Sbjct: 479 TRGQQIKVVSQLLRKAREKGYLMPAYGGGVQEEQYEGA-----TVIEPKKGYYSDPVATL 533
Query: 581 DFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C++T L G LG+S +P
Sbjct: 534 DFSSLYPSIMMAHNLCYTTLLQPGAPSRLGLSPD--------------------QYIKTP 573
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+ FV+KS+R G+LP++L+ +L R K +KE K
Sbjct: 574 ASNFFVNKSVRKGLLPEILENLLAARKKAKADLKEEK 610
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y+DP+ LDF SLYPS+++A+N C++T L G LG+S
Sbjct: 526 YSDPVATLDFSSLYPSIMMAHNLCYTTLLQPGAPSRLGLS 565
>gi|324120728|dbj|BAJ78755.1| DNA polymerase delta catalytic subunit [Blattella nipponica]
Length = 1039
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 164/337 (48%), Gaps = 43/337 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---- 408
+ E+EL + VR+ DPD++ GY I + YL+ R L + L R+ ++
Sbjct: 309 AREQELLEKWAAFVREVDPDLITGYNINNFDFPYLINRAKHLKVASFSFLGRVKDISSVI 368
Query: 409 -----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + R E KN + GR + +L +L + L+SYT + YH L E+
Sbjct: 369 KEQILQSKQMGRRENKNINCE--GRTLFDLLLVLVRDYKLRSYTLNAVSYHFLSEQKEDV 426
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+++L I EMAR+ G+ +L
Sbjct: 427 HHSIITDLQNGNPQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLSSLL 484
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q +V S +LR +R ++ A +++ + A ++EP+ Y+DPI L
Sbjct: 485 TRGQQIKVVSQLLRKAREKGYLMPAYGGGVQEEQYEGA-----TVIEPKKGYYSDPIATL 539
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRV--EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C++T L ++LG++ + +K QN
Sbjct: 540 DFSSLYPSIMMAHNLCYTTLLNPASRDNLGLTPD------------KYVKTPAQNF---- 583
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV+KS+R G+LP++L+ +L R K +K K
Sbjct: 584 ----FVNKSVRKGLLPEILENLLSARKKAKTDLKNEK 616
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV--EHLGVS 148
Y+DPI LDF SLYPS+++A+N C++T L ++LG++
Sbjct: 532 YSDPIATLDFSSLYPSIMMAHNLCYTTLLNPASRDNLGLT 571
>gi|427792855|gb|JAA61879.1| Putative dna polymerase type-b family, partial [Rhipicephalus
pulchellus]
Length = 1003
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 160/331 (48%), Gaps = 44/331 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE------- 407
E+EL + + +R+ DPDI+ GY I+ + YL+ R L ++L L RI
Sbjct: 275 ERELLKRWSDFLREVDPDIITGYNIQNFDFPYLMNRAKTLQVDLFPFLGRIRNCKTLLKD 334
Query: 408 --VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ + R E N + M GR+ +L ++L + L+SYT + YH L E+
Sbjct: 335 AIMQSKQMGRRE--NKVVTMEGRVQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQH 392
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + EMAR+ G+ +LSR
Sbjct: 393 SIITDLQNGTDQTRRRLAV--YCLKDAMLPLRLLDKLMSVINYMEMARVTGVPMTYLLSR 450
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDF 582
G Q +V S +LR + + V P + H A E ++EP Y+ PI LDF
Sbjct: 451 GQQIKVVSQLLRKAAEQDLVM--PVV----HSEAGEDFEGATVIEPVKGFYSVPIATLDF 504
Query: 583 QSLYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+++A+N C++T L R L D F IR +PSG
Sbjct: 505 SSLYPSIMMAHNLCYTTVLDNRQRELLKPDQF----------IR-----------TPSGD 543
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP++L+++L R K +K
Sbjct: 544 HFVKASVRKGLLPEILEDLLSARKRAKTDLK 574
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+ PI LDF SLYPS+++A+N C++T L
Sbjct: 494 FYSVPIATLDFSSLYPSIMMAHNLCYTTVL 523
>gi|340052318|emb|CCC46594.1| putative DNA polymerase delta catalytic subunit [Trypanosoma vivax
Y486]
Length = 1026
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 41/331 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN------LNQELSRITE 407
E+E+ + + +++ DPDIL GY I + YLL+RG L +N Q R T+
Sbjct: 295 TEEEMLLAWAQFLKEVDPDILTGYNICNFDFPYLLDRGSALAINDVYHYWGRQINERTTQ 354
Query: 408 VEKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--L 462
EK+ S+ ++ N T+L M GR+V+++ +++ + L+SY+ + L E+
Sbjct: 355 REKKFQSK-QMGNREYTELTMEGRVVMDVMVVIQRDYKLRSYSLNAVSQQFLGEQKEDVH 413
Query: 463 HS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
HS +L E R L + + YL ++L+E+L + EMAR+ G+
Sbjct: 414 HSNIAELQQGNHETRRRLAVYCLKDAYLP-----VKLLERLMIVVNHVEMARVTGVPIGW 468
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L RG Q +V S++LR +RL + + P+++ + ++EP LY P++ L
Sbjct: 469 LLERGQQIKVFSMLLRKARLRDLLI--PTLEYSGGDQRGFEGATVIEPTKGLYMTPVVTL 526
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+IIA+N C+ST + ++ +P + L +P+G
Sbjct: 527 DFASLYPSIIIAHNLCYSTLVQDCN----AERYP----------------KDGLNHTPTG 566
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV + + G+LP++LQ++L R ++ M
Sbjct: 567 HYFVSRDVYPGVLPEVLQDLLLARKNARELM 597
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
LY P++ LDF SLYPS+IIA+N C+ST
Sbjct: 518 LYMTPVVTLDFASLYPSIIIAHNLCYST 545
>gi|307203676|gb|EFN82660.1| DNA polymerase delta catalytic subunit [Harpegnathos saltator]
Length = 1054
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 176/395 (44%), Gaps = 52/395 (13%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G+E PE + P+ M E E F I P ++G ++ +F
Sbjct: 271 GREGIFPEAKHDPVIQIANMVIKQGESEPFLRNIFTFGTCAP--IVGCQVLSFE------ 322
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E + + + VRQ DPDI GY I + YL+ R L + L RI +
Sbjct: 323 -----KESLMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAQHLNVQNFSFLGRIKNI 377
Query: 409 EKRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R+ +D V +N + GR+ +L +L + L+SY+ + YH L E+
Sbjct: 378 --RSVIKDHVLQSKQLGRRENKSINFEGRVPFDLLLVLVRDYKLRSYSLNAVSYHFLQEQ 435
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
K +T + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 436 KEDVQHKDITGLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSI 493
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR +R +++ + Q ++EP+ Y DPI
Sbjct: 494 SSLLTRGQQIKVVSQLLRKTREKDYLM---PVHQGHGTDEQFEGGTVIEPKRGYYNDPIA 550
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+I+A+N C++T L + +LN+ + ++ +P
Sbjct: 551 TLDFSSLYPSIIMAHNLCYTTLLTIAKKK-----------ELNIP-------EDDVNTTP 592
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S FV S+R GILP++L+ +L R K +K+
Sbjct: 593 SNSLFVKSSVRKGILPEILENLLAARKKAKVELKQ 627
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + D P + T F+ + Y DPI LDF SLYPS+I+A
Sbjct: 507 SQLLRKTREKDYLMPVHQGHGTDEQFEGGTV--IEPKRGYYNDPIATLDFSSLYPSIIMA 564
Query: 131 YNYCFSTCL 139
+N C++T L
Sbjct: 565 HNLCYTTLL 573
>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
Length = 1030
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 180/399 (45%), Gaps = 56/399 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + + FI NV D +IG ++ +F+
Sbjct: 249 GRKGVFPEPEHDPVIQIANMVIRQGSKEPFIRNVFTLDTCAPIIGSQVLSFA-------- 300
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----- 405
E E+ + VR+ DPDIL GY I YL+ R L N L RI
Sbjct: 301 ---KESEMLEKWAAFVREVDPDILTGYNINNFDIPYLINRANHLKANNFTYLGRIKNTRS 357
Query: 406 ----TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
T ++ + R E K+ + GR+ +L +L + L+SYT + +H L E+
Sbjct: 358 VIKDTVLQSKQMGRRENKSVNFE--GRVPFDLLFVLLRDYKLRSYTLNAVSFHFLGEQKE 415
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++ + + V Y ++ + ++L+E+L I EMAR+ G+
Sbjct: 416 DVHHSIIADLQNGNATTRRRLAV--YCLKDAFLPLKLLEKLMCIINYMEMARVTGVSLPS 473
Query: 521 VLSRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR +R +V A +++ + A ++EP+ Y DPI
Sbjct: 474 LLTRGQQIKVVSQLLRKAREKGYVIPAYGGGVQEEQYEGA-----TVIEPKKGYYADPIA 528
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G E LG++
Sbjct: 529 TLDFSSLYPSIMMAHNLCYTTLLQSGPREKLGLTPD--------------------QYIK 568
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+ FV KS+R G+LP++L+ +L R K +K K
Sbjct: 569 TPASNYFVTKSVRKGLLPEILENLLAARKKAKADLKNEK 607
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y DPI LDF SLYPS+++A+N C++T L G E LG++
Sbjct: 523 YADPIATLDFSSLYPSIMMAHNLCYTTLLQSGPREKLGLT 562
>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
Length = 1000
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 47/366 (12%)
Query: 325 VRQWDPDILIGYEIETFSWGYLLERHFVS--NEKELFSIFIENVRQWDPDILIGYEIETL 382
+RQ + + I + ++ H +S E+E+ + E +R+ DPDI+ GY I
Sbjct: 239 IRQGESEPFIRNVFTLNTCAPIVGSHVLSFQTEQEMLCKWSEFIREVDPDIITGYNINNF 298
Query: 383 SWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV---------KNTQLQMPGRIVINL 433
+ YL++R + L + + LSRI ++ R+ R++V +N + + GR+ +L
Sbjct: 299 DFPYLIDRAHHLKVKDFEFLSRIKDI--RSVIRNKVLQSKQMGRRENKSMNIEGRVPFDL 356
Query: 434 WRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLI 489
+L + L+SYT + YH L E+ ++T + R L + + YL
Sbjct: 357 LLVLVRDYKLRSYTLNAVSYHFLKEQKEDVHHSVITDMQNESDQTRRRLAMYCLKDAYLP 416
Query: 490 RVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPS 549
+RL+ +L I EMAR+ G+ +L+RG Q +V S +LR ++ + ++ P+
Sbjct: 417 -----LRLLNKLMCIINYMEMARVTGVPLACLLNRGQQIKVVSQLLRKAKTSKYIM--PA 469
Query: 550 IKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 607
+ E +I +P Y++PI LDF SLYPS+++A+N C++T L E L
Sbjct: 470 YHSQGSDDQYEGATVI-DPLKGYYSNPIATLDFASLYPSIMMAHNLCYTTLLPNHMKEKL 528
Query: 608 GVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMV 667
++D +T +PS FV ++R G+LP++L+ +L R
Sbjct: 529 NITDD--------------------QVTRTPSNNMFVKSTVRKGLLPEILESLLGARKKA 568
Query: 668 KQSMKE 673
K +KE
Sbjct: 569 KADLKE 574
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Query: 87 RKNKSTR-------SSFDSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFS 136
RK K+++ S D + ++ D L Y++PI LDF SLYPS+++A+N C++
Sbjct: 458 RKAKTSKYIMPAYHSQGSDDQYEGATVIDPLKGYYSNPIATLDFASLYPSIMMAHNLCYT 517
Query: 137 TCLGR--VEHLGVSD 149
T L E L ++D
Sbjct: 518 TLLPNHMKEKLNITD 532
>gi|343428135|emb|CBQ71665.1| probable DNA polymerase delta catalytic subunit [Sporisorium
reilianum SRZ2]
Length = 1057
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E + F++NV + ++G ++ +F+
Sbjct: 277 GRKGVFPEPSIDPVIQIANMVTRQGE-STPFVKNVFTLNTCSHIVGSQVLSFN------- 328
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----LNQELSRI 405
E ++ + + V++ DPD++IGY I + YLL+R L L +E
Sbjct: 329 ----KEIDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDRAKALKSTKFAYLGRERGVR 384
Query: 406 TEVE------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
TE + K +RD KNT+LQ GR+ +++ ++++ + L+SY+ ++ + L E+
Sbjct: 385 TEAKDTHFSSKAYGTRDS-KNTELQ--GRLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 441
Query: 460 IPLHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
L+T E R L + + YL + RL+++L EMAR+ G
Sbjct: 442 KEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYIEMARVTG 496
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q +V S + R + +N++ P+ K E +LEP++ Y
Sbjct: 497 VPFNYLLSRGQQIKVVSQLFRKANEDNYLV--PAYKGEGTEDQYEG-ATVLEPKAGYYDR 553
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPSV++A+N C++T L + ID R K ++
Sbjct: 554 PIATLDFASLYPSVMMAHNLCYTTLLDK------------KTID-----RLELKQDEDYV 596
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
I+P+ F K +R G+LP +L+ +L R K +K+
Sbjct: 597 ITPNNNCFATKKLRKGLLPTVLENLLAARKRAKADLKK 634
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMF--PSSSSRDRLYTDPIIVLDFQSLYPSVI 128
S L R D+ P K + T ++ P + DR PI LDF SLYPSV+
Sbjct: 513 SQLFRKANEDNYLVPAYKGEGTEDQYEGATVLEPKAGYYDR----PIATLDFASLYPSVM 568
Query: 129 IAYNYCFSTCLGR 141
+A+N C++T L +
Sbjct: 569 MAHNLCYTTLLDK 581
>gi|68478001|ref|XP_717004.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
gi|68478136|ref|XP_716937.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438626|gb|EAK97954.1| hypothetical protein CaO19.12649 [Candida albicans SC5314]
gi|46438697|gb|EAK98024.1| hypothetical protein CaO19.5182 [Candida albicans SC5314]
Length = 678
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + E + + DPD++IGY Y+L R LGLN R+ V +
Sbjct: 308 EEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV--KQEI 365
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 366 KDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 425
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F +LSR
Sbjct: 426 SIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSR 483
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + V P++K E +I EPE Y PI LDF S
Sbjct: 484 GQQIKVISQLFRKCLQEDIVI--PNLKSEGSNEEYEGATVI-EPERGYYDVPIATLDFSS 540
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + SI++ + + T +P+G FV
Sbjct: 541 LYPSIMMAHNLCYTTLLNK------------------NSIKAFGLTEDDYTKTPNGDYFV 582
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++R GILP +L E+L R K +K+
Sbjct: 583 HSNLRKGILPTILDELLTARKKAKADLKK 611
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
+R Y D PI LDF SLYPS+++A+N C++T L + ++ G+++
Sbjct: 525 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTE 569
>gi|77022890|ref|XP_888889.1| hypothetical protein CaO19_5182 [Candida albicans SC5314]
gi|76573702|dbj|BAE44786.1| hypothetical protein [Candida albicans]
Length = 1038
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + E + + DPD++IGY Y+L R LGLN R+ V +
Sbjct: 308 EEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV--KQEI 365
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 366 KDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 425
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F +LSR
Sbjct: 426 SIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSR 483
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + V P++K E +I EPE Y PI LDF S
Sbjct: 484 GQQIKVISQLFRKCLQEDIVI--PNLKSEGSNEEYEGATVI-EPERGYYDVPIATLDFSS 540
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + SI++ + + T +P+G FV
Sbjct: 541 LYPSIMMAHNLCYTTLLNK------------------NSIKAFGLTEDDYTKTPNGDYFV 582
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++R GILP +L E+L R K +K+
Sbjct: 583 HSNLRKGILPTILDELLTARKKAKADLKK 611
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
+R Y D PI LDF SLYPS+++A+N C++T L + ++ G+++
Sbjct: 525 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTE 569
>gi|951001|emb|CAA61282.1| DNA-directed DNA polymerase III [Candida albicans]
Length = 1038
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + E + + DPD++IGY Y+L R LGLN R+ V +
Sbjct: 308 EEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV--KQEI 365
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 366 KDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 425
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F +LSR
Sbjct: 426 SIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSR 483
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + V P++K E +I EPE Y PI LDF S
Sbjct: 484 GQQIKVISQLFRKCLQEDIVI--PNLKSEGSNEEYEGATVI-EPERGYYDVPIATLDFSS 540
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + SI++ + + T +P+G FV
Sbjct: 541 LYPSIMMAHNLCYTTLLNK------------------NSIKAFGLTEDDYTKTPNGDYFV 582
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++R GILP +L E+L R K +K+
Sbjct: 583 HSNLRKGILPTILDELLTARKKAKADLKK 611
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
+R Y D PI LDF SLYPS+++A+N C++T L + ++ G+++
Sbjct: 525 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTE 569
>gi|13124716|sp|P46588.2|DPOD_CANAL RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|3850149|emb|CAA21949.1| DNA polymerase delta [Candida albicans]
Length = 1038
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + E + + DPD++IGY Y+L R LGLN R+ V +
Sbjct: 308 EEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV--KQEI 365
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 366 KDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 425
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F +LSR
Sbjct: 426 SIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLLSR 483
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + V P++K E +I EPE Y PI LDF S
Sbjct: 484 GQQIKVISQLFRKCLQEDIVI--PNLKSEGSNEEYEGATVI-EPERGYYDVPIATLDFSS 540
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + SI++ + + T +P+G FV
Sbjct: 541 LYPSIMMAHNLCYTTLLNK------------------NSIKAFGLTEDDYTKTPNGDYFV 582
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++R GILP +L E+L R K +K+
Sbjct: 583 HSNLRKGILPTILDELLTARKKAKADLKK 611
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
+R Y D PI LDF SLYPS+++A+N C++T L + ++ G+++
Sbjct: 525 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTE 569
>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
Length = 1115
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 203/450 (45%), Gaps = 75/450 (16%)
Query: 252 IH-AISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVR 302
IH ++SR ++ D AYD K I Y P E ++ + I G++ PE
Sbjct: 291 IHKSVSRCQIEVDIAYD--KLICY----APDGEWAEIAPLRILSFDIECAGRKGIFPEAE 344
Query: 303 TKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFS--WGYLLERHFVSNEKELFS 360
P+ ++ ++ Q +P I + ++T + G L++ +E +L
Sbjct: 345 HDPVIQ---------IASMVQIQGQLEPMIRTVFTLDTCAPIVGALVKS--FDSEVQLLE 393
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQELSRITEVEKR 411
+ VRQ DPD+L GY I YLL R Y+ +N R + ++ +
Sbjct: 394 SWASFVRQVDPDLLTGYNINNFDLPYLLNRARHLHCKHFHYLGRINNTMSCVRESMLQSK 453
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPLHSWKLLTC 470
R E KN ++ GR+ +L +L + L+SYT ++ +H L E + +H +
Sbjct: 454 QMGRRENKNINIE--GRVTFDLLLVLLRDYKLRSYTLNSVSFHFLSEQKEDVHHSIISDL 511
Query: 471 WW---EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ + R L + + YL +RL+++L I EMAR+ G+ +L+RG Q
Sbjct: 512 HYGNAQTRRRLAVYCLKDAYLP-----LRLLDKLMCIINYMEMARVTGVPLSFLLTRGQQ 566
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
+V S +LR +R V P+ + RA E +I EP Y PI LDF SLYP
Sbjct: 567 VKVMSQILRKAREQKLVV--PTYQSRASDEQFEGATVI-EPNKGYYDVPIATLDFSSLYP 623
Query: 588 SVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
S+++A+N C++T L G + LG D +PSG FV
Sbjct: 624 SIMMAHNLCYTTLLAPGSEKTLGAED----------------------FVRTPSGNLFVK 661
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
++R G+LP++L+ +L R K+ +K K
Sbjct: 662 STLRKGLLPEILENLLAARKKAKEELKNEK 691
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG D
Sbjct: 609 YDVPIATLDFSSLYPSIMMAHNLCYTTLLAPGSEKTLGAED 649
>gi|71005878|ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
gi|46097098|gb|EAK82331.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
Length = 1057
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E + F++NV + ++G ++ +F+
Sbjct: 277 GRKGIFPEPSVDPVIQIANMVTRQGEP-TPFVKNVFTLNTCSHIVGSQVLSFN------- 328
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----LNQELSRI 405
E ++ + + V++ DPD++IGY I + YLL+R L L +E
Sbjct: 329 ----KEVDMLEAWTKFVQEVDPDVVIGYNIANFDFPYLLDRAKALKSTKFAYLGRERGAR 384
Query: 406 TEVE------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
TE + K +RD KNT+LQ GR+ +++ ++++ + L+SY+ ++ + L E+
Sbjct: 385 TEAKDTHFSSKAYGTRDS-KNTELQ--GRLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 441
Query: 460 IPLHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
L+T E R L + + YL + RL+++L EMAR+ G
Sbjct: 442 KEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYIEMARVTG 496
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q +V S + R + +N++ P+ K E +LEP++ Y
Sbjct: 497 VPFNYLLSRGQQIKVVSQLFRKANEDNYLV--PAYKGEGTEDQYEG-ATVLEPKAGYYDR 553
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPSV++A+N C++T L + ID R K ++
Sbjct: 554 PIATLDFASLYPSVMMAHNLCYTTLLDK------------KTID-----RLELKQDEDYV 596
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
I+P+ F K +R G+LP +L+ +L R K +K+
Sbjct: 597 ITPNNNYFATKKLRKGLLPTVLENLLAARKRAKADLKK 634
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMF--PSSSSRDRLYTDPIIVLDFQSLYPSVI 128
S L R D+ P K + T ++ P + DR PI LDF SLYPSV+
Sbjct: 513 SQLFRKANEDNYLVPAYKGEGTEDQYEGATVLEPKAGYYDR----PIATLDFASLYPSVM 568
Query: 129 IAYNYCFSTCLGR 141
+A+N C++T L +
Sbjct: 569 MAHNLCYTTLLDK 581
>gi|448103715|ref|XP_004200106.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359381528|emb|CCE81987.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 161/332 (48%), Gaps = 41/332 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+E+ + + + DPDI+IGY I YL++R LGL+ R+ V +
Sbjct: 351 EEEMLMHWRDFIVDVDPDIIIGYNIANFDLPYLIDRAKALGLSDFPFFGRLPSV--KQEV 408
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 409 KDTVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 468
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++T E R L + + YL +RL+E+L + +EMAR+ G+ F +
Sbjct: 469 SIITDLQNGNRETRRRLAVYCLKDAYLP-----LRLMEKLMCLVNYTEMARVTGVPFSYL 523
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L+RG Q +V S + R +N V P++K E +++EP Y PI LD
Sbjct: 524 LARGQQIKVISQLFRKCLEDNIVI--PNMKSEGTNEDYEG-AIVIEPVRGYYDVPIATLD 580
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+++A+N C++T L + +I +L + + T++P+G
Sbjct: 581 FSSLYPSIMMAHNLCYTTLLNK------------------QTINTLNLKEDDYTLTPNGD 622
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV R GILP +L+E+L R K +K+
Sbjct: 623 YFVKDHKRKGILPTILKELLTARKKAKADLKK 654
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 572 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNK 602
>gi|222615647|gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
Length = 1100
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 66/411 (16%)
Query: 293 GQESELPEVRTKP-IQM-NFVS--NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P IQ+ N V+ E + F + ++ P ++G ++ +F
Sbjct: 307 GRKGHFPEPTHDPVIQIANLVTLQGEGQPFVRNVMTLKSCSP--IVGVDVMSFD------ 358
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--- 405
E+++ + + +R+ DPDI+IGY I YL+ER VL + L RI
Sbjct: 359 -----TERDVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAEVLKIVEFPILGRIRNS 413
Query: 406 ------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
T R E K+ ++ GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 414 RVRVRDTTFSSRQYGMRESKDVAVE--GRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQ 471
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII---------------RLIEQLDFI 504
+++ + + + V Y ++V G++ RL+++L +I
Sbjct: 472 KEDVHHSIISDLQNGNSETRRRLAV--YCLKV-GLLDCQWLRYLPDAYLPQRLLDKLMYI 528
Query: 505 GRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL 564
EMAR+ G+ +LSRG +V S +LR ++ N V P+IK +A +
Sbjct: 529 YNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNIKGQASGQDTFEGAT 586
Query: 565 ILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSI 624
+LE + Y PI LDF SLYPS+++AYN C+ T + P LN+
Sbjct: 587 VLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVP-----------PEDARKLNLPP 635
Query: 625 RSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
S+ K +PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 636 ESVNK-------TPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAK 679
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K +++ D F ++ +R Y PI LDF SLYPS+
Sbjct: 556 SQLLRKAKQKNLVIPNIKGQAS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 611
Query: 128 IIAYNYCFST 137
++AYN C+ T
Sbjct: 612 MMAYNLCYCT 621
>gi|357157316|ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Brachypodium distachyon]
Length = 1106
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + + E + F + ++ P ++G ++ +F
Sbjct: 326 GRKGHFPEPTHDPVIQIANLLTLQGEAQPFVRNVMTLKSCSP--IVGVDVMSFD------ 377
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+++ + + +R+ DPDI+IGY I YL+ER VL + L RI
Sbjct: 378 -----TERDILLAWRDLIREADPDIIIGYNICKFDLPYLIERAEVLKIVEFPLLGRIRNS 432
Query: 409 EKR------NSSRDEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
R NS + V+ ++ + + GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 433 RVRVRDTTFNSRQYGVRESKDVTVEGRVQFDLLQAVQRDYKLSSYSLNSVSAHFLGEQKE 492
Query: 462 --LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
HS L E R L + + YL + RL+++L +I EMAR+ G+
Sbjct: 493 DVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQ-----RLLDKLMYIYNYVEMARVTGVP 547
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+LSRG +V S +LR ++ N V P+IK + + +LE + Y PI
Sbjct: 548 ISFLLSRGQSIKVLSQLLRKAKQRNLVI--PNIKGQGSGQDTFEGATVLEARAGFYEKPI 605
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++A+N C+ T + P LN+ SL K +
Sbjct: 606 ATLDFASLYPSIMMAHNLCYCTLVP-----------PEDVRKLNLPPESLYK-------T 647
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 648 PSGEIFVKPELQKGILPEILEELLTARKRAKADLKEAK 685
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K + + D F ++ +R Y PI LDF SLYPS+
Sbjct: 562 SQLLRKAKQRNLVIPNIKGQGS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 617
Query: 128 IIAYNYCFST 137
++A+N C+ T
Sbjct: 618 MMAHNLCYCT 627
>gi|388852680|emb|CCF53598.1| probable DNA polymerase delta catalytic subunit [Ustilago hordei]
Length = 1057
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 191/398 (47%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E S F++NV + ++G ++ +F+
Sbjct: 277 GRKGVFPEASMDPVIQIANMVTRQGE-SSPFVKNVFTLNTCSHIVGSQVLSFN------- 328
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----LNQELSRI 405
E ++ + + V++ DPD++IGY I + YLL+R L L +E
Sbjct: 329 ----KEIDMLEAWTKFVQEVDPDVIIGYNIANFDFPYLLDRAKALKSTKFAYLGRERGVR 384
Query: 406 TEVE------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
TE + K +RD KNT+LQ GR+ +++ ++++ + L+SY+ ++ + L E+
Sbjct: 385 TEAKDTHFSSKAYGTRDS-KNTELQ--GRLQLDMLQVMQRDYKLRSYSLNSVSFEFLGEQ 441
Query: 460 IPLHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
L+T E R L + + YL + RL+++L EMAR+ G
Sbjct: 442 KEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYIEMARVTG 496
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q +V S + R + + ++ P+ K E +LEP++ Y
Sbjct: 497 VPFNYLLSRGQQIKVVSQLFRKANEDKYLV--PAYKGEGTEDQYEG-ATVLEPKAGYYDR 553
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPSV++A+N C++T L + ID R K +
Sbjct: 554 PIATLDFASLYPSVMMAHNLCYTTLLDK------------KTID-----RLELKENDDFV 596
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
I+P+ F K +R G+LP +L+ +L R K +K+
Sbjct: 597 ITPNNNYFATKKLRKGLLPTVLENLLAARKRAKADLKK 634
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMF--PSSSSRDRLYTDPIIVLDFQSLYPSVI 128
S L R D P K + T ++ P + DR PI LDF SLYPSV+
Sbjct: 513 SQLFRKANEDKYLVPAYKGEGTEDQYEGATVLEPKAGYYDR----PIATLDFASLYPSVM 568
Query: 129 IAYNYCFSTCLGR 141
+A+N C++T L +
Sbjct: 569 MAHNLCYTTLLDK 581
>gi|350645608|emb|CCD59733.1| DNA polymerase delta catalytic subunit,putative [Schistosoma
mansoni]
Length = 1177
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 23/329 (6%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-------E 407
EKEL + + VR+ DPDI+ GY I+ YL+ R L ++ + L RI E
Sbjct: 431 EKELLAKWSAFVREVDPDIITGYNIQNFDLPYLINRANTLKVDGFEFLGRIRGARSTIRE 490
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ +N + + GR+ +L ++L + L+SYT + YH L E+ +
Sbjct: 491 AMTQSKQMGRRENKFVNIDGRVQFDLLQILFRDYKLRSYTLNAVSYHFLEEQKEDVHHNV 550
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG
Sbjct: 551 ITDLQNGDAQTRRRLAV--YCLKDAYLPLRLLDKLMCIVNNIEMARVTGVPLTYLLTRGQ 608
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR + + ++ + +Q +LEP Y +PI LDF SLY
Sbjct: 609 QVKVVSQLLRKAHEHGYLLPTYQSQQGDEFVGAT----VLEPRKGFYNEPIATLDFASLY 664
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS--IRSLKKLQQNLTISPSGVAFV 644
PS+++A+N C++T L ++ P G + ++ ++ +P+G FV
Sbjct: 665 PSIMMAHNLCYTTLLQ-------VNTTPHGSTGGGIQALVQRYNLTDEDYIKTPTGAYFV 717
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
I GILP++LQ++L R K + +
Sbjct: 718 KSHICHGILPEILQQLLSARKKAKAELAK 746
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 647 RKGFYNEPIATLDFASLYPSIMMAHNLCYTTLL 679
>gi|256087234|ref|XP_002579779.1| DNA polymerase delta catalytic subunit [Schistosoma mansoni]
Length = 1182
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 23/329 (6%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-------E 407
EKEL + + VR+ DPDI+ GY I+ YL+ R L ++ + L RI E
Sbjct: 431 EKELLAKWSAFVREVDPDIITGYNIQNFDLPYLINRANTLKVDGFEFLGRIRGARSTIRE 490
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ +N + + GR+ +L ++L + L+SYT + YH L E+ +
Sbjct: 491 AMTQSKQMGRRENKFVNIDGRVQFDLLQILFRDYKLRSYTLNAVSYHFLEEQKEDVHHNV 550
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG
Sbjct: 551 ITDLQNGDAQTRRRLAV--YCLKDAYLPLRLLDKLMCIVNNIEMARVTGVPLTYLLTRGQ 608
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR + + ++ + +Q +LEP Y +PI LDF SLY
Sbjct: 609 QVKVVSQLLRKAHEHGYLLPTYQSQQGDEFVGAT----VLEPRKGFYNEPIATLDFASLY 664
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS--IRSLKKLQQNLTISPSGVAFV 644
PS+++A+N C++T L ++ P G + ++ ++ +P+G FV
Sbjct: 665 PSIMMAHNLCYTTLLQ-------VNTTPHGSTGGGIQALVQRYNLTDEDYIKTPTGAYFV 717
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
I GILP++LQ++L R K + +
Sbjct: 718 KSHICHGILPEILQQLLSARKKAKAELAK 746
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 647 RKGFYNEPIATLDFASLYPSIMMAHNLCYTTLL 679
>gi|238883420|gb|EEQ47058.1| DNA polymerase delta catalytic subunit [Candida albicans WO-1]
Length = 849
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 50/394 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFS--WGYLLER 349
G++ PE P IQ+ V + F+ NV + + T S G +
Sbjct: 66 GRKGVFPEAEHDPVIQIANVVQKSGESKPFVRNV----------FTVNTCSSIIGSQIFE 115
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H E+++ + E + + DPD++IGY Y+L R LGLN R+ V
Sbjct: 116 H--QREEDMLMHWKEFITKVDPDVIIGYNTANFDIPYVLNRAKALGLNDFPFFGRLKRV- 172
Query: 410 KRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+ +D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 173 -KQEIKDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQK 231
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F
Sbjct: 232 EDVQHSIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 289
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S + R + V P++K E +I EPE Y PI
Sbjct: 290 YLLSRGQQIKVISQLFRKCLQEDIVI--PNLKSEGSNEEYEGATVI-EPERGYYDVPIAT 346
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T L + SI++ + + T +P+
Sbjct: 347 LDFSSLYPSIMMAHNLCYTTLLNK------------------NSIKAFGLTEDDYTKTPN 388
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G FV ++R GILP +L E+L R K +K+
Sbjct: 389 GDYFVHSNLRKGILPTILDELLTARKKAKADLKK 422
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
+R Y D PI LDF SLYPS+++A+N C++T L + ++ G+++
Sbjct: 336 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTE 380
>gi|66511388|ref|XP_623795.1| PREDICTED: DNA polymerase delta catalytic subunit [Apis mellifera]
Length = 1105
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 33/335 (9%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E ++ + + VRQ DPDI GY I + YL+ R L + L RI ++
Sbjct: 375 EHKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRANHLNVRDFYFLGRIKNIKSVIKT 434
Query: 411 ---RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ +N + GR+ +L +L + L+SYT + YH L E+ +
Sbjct: 435 QVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSI 494
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG
Sbjct: 495 ITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIFIYMEMARVTGVSISSLLTRGQ 552
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR +R +++ P + +A E +I EP+ Y DPI LDF SLY
Sbjct: 553 QIKVVSQLLRKTREKDYLM--PVHRVQASDEQFEGATVI-EPKRGYYNDPIATLDFSSLY 609
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+I+A+N C++T + + +I+S N+TI+P+ FV
Sbjct: 610 PSIIMAHNLCYTTLIKYDKQ-------------AKNNIQS-----DNITITPNDSKFVKV 651
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLR 681
+IR GILP++L+ +L R K +K K ++SL+
Sbjct: 652 NIRKGILPEILENLLSARKAAKAELK--KETDSLK 684
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + D P + +++ F+ + Y DPI LDF SLYPS+I+A
Sbjct: 558 SQLLRKTREKDYLMPVHRVQASDEQFEGATV--IEPKRGYYNDPIATLDFSSLYPSIIMA 615
Query: 131 YNYCFSTCL 139
+N C++T +
Sbjct: 616 HNLCYTTLI 624
>gi|324120688|dbj|BAJ78735.1| DNA polymerase delta catalytic subunit [Petrobiellus takunagae]
Length = 1005
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 165/337 (48%), Gaps = 47/337 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+ E EL + + VR+ DPDI+ GY I + YLL R LG+ L RI ++
Sbjct: 275 AREAELLKRWADFVREADPDIVTGYNINNFDFPYLLNRAQHLGVKDFPFLGRIKDI---- 330
Query: 413 SSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R VK T LQ GR++ +L +L E L+SYT + +H L E+
Sbjct: 331 --RTVVKETVLQSKQLGRRENKFINTEGRVLFDLLLVLVREYKLRSYTLNAVSFHFLQEQ 388
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
+++ + + + V Y ++ + + +RL+++L I EMAR+ G+
Sbjct: 389 KEDVQHSIISDLQNGNSQTRRRLAV--YCLKDSYLPLRLLDKLMCIINYMEMARVTGVSL 446
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR +R +FV P+ + E +I EPE Y PI
Sbjct: 447 PSLLTRGQQIKVVSQLLRKAREKDFVI--PTYQGTGSDEQYEGATVI-EPERGYYDVPIA 503
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G V LG++ DL V
Sbjct: 504 TLDFSSLYPSIMMAHNLCYTTLLQPGWVNKLGLTP-------DLYVE------------- 543
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV ++R G+LP++L+ +L R K+ +K+
Sbjct: 544 TPAGSMFVKSTVRKGLLPEILESLLAARKKAKEDLKK 580
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTD-PIIVLDFQSLYPSVII 129
S L R + D PT + + ++ + +R Y D PI LDF SLYPS+++
Sbjct: 460 SQLLRKAREKDFVIPTYQGTGSDEQYEG---ATVIEPERGYYDVPIATLDFSSLYPSIMM 516
Query: 130 AYNYCFSTCL--GRVEHLGVS 148
A+N C++T L G V LG++
Sbjct: 517 AHNLCYTTLLQPGWVNKLGLT 537
>gi|241993500|ref|XP_002399458.1| DNA polymerase delta catalytic subunit, putative [Ixodes
scapularis]
gi|215492989|gb|EEC02630.1| DNA polymerase delta catalytic subunit, putative [Ixodes
scapularis]
Length = 1018
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 44/331 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E EL + + VR DPD++ GY I+ + YL+ R L + L RI + R
Sbjct: 290 EGELLQKWADFVRDVDPDVITGYNIQNFDFPYLINRAKHLNVTHFPYLGRIRD--SRTIL 347
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + M GR+ +L ++L + L+SYT + YH L E+
Sbjct: 348 KDSVMQSKQMGRRENKVVTMEGRVQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQH 407
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + EMAR+ G+ +LSR
Sbjct: 408 SIITDLQNGTDQTRRRLAV--YCLKDAMLPLRLLDKLMSVINYMEMARVTGVPLTYLLSR 465
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDF 582
G Q +V S +LR + + V P++ H A E ++EP Y+ PI LDF
Sbjct: 466 GQQIKVVSQLLRKAAEQDLVM--PTV----HSEAGEDFTGATVIEPAKGFYSVPIATLDF 519
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGV-SDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+++A+N C++T L + + +D F IR +PSG
Sbjct: 520 SSLYPSIMMAHNLCYTTVLDSKQREALRADEF----------IR-----------TPSGD 558
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP++L+++L R K +K
Sbjct: 559 HFVKASVRKGLLPEILEDLLAARKKAKTDLK 589
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+ PI LDF SLYPS+++A+N C++T L
Sbjct: 509 FYSVPIATLDFSSLYPSIMMAHNLCYTTVL 538
>gi|324120694|dbj|BAJ78738.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1097
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 164/335 (48%), Gaps = 43/335 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+ E E+ + + VR+ DPD+ GY I YLL R L + L RI ++ R+
Sbjct: 366 TRENEMLEKWADFVREVDPDVFTGYNINNFDLPYLLNRAKHLTVRNFHYLGRIKDI--RS 423
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++++ +N + GR+ +L +L + L+SYT + +H L E+
Sbjct: 424 VVKEQILQSKQLGRRENKSINTEGRVPFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKEDV 483
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + + V Y ++ + +RL+++L + EMAR+ G+ +L
Sbjct: 484 HHSVISDLQQGNPQTRRRLAV--YCLKDAYLPLRLLDKLMCMINYMEMARVTGVPLSSLL 541
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q +V S +LR +R +FV A S ++ + A ++EP+ Y DPI L
Sbjct: 542 TRGQQIKVVSQLLRKAREKDFVIPAYSGGTQEDQYEGA-----TVIEPKRGYYDDPIATL 596
Query: 581 DFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C+++ L G E LG++ + +P
Sbjct: 597 DFSSLYPSIMMAHNLCYTSLLQPGVKEKLGLTPD--------------------QYSRTP 636
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+G FV +S+R G+LP++L+ +L R K +K+
Sbjct: 637 AGNFFVKQSVRKGLLPEILENLLAARKKAKADLKK 671
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y DPI LDF SLYPS+++A+N C+++ L G E LG++
Sbjct: 589 YDDPIATLDFSSLYPSIMMAHNLCYTSLLQPGVKEKLGLT 628
>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
Length = 1097
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 56/396 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + ++ F+ NV D ++G ++ +FS
Sbjct: 315 GRKGIFPEPNHDPVIQIANMVVKQGSPEPFVRNVFTLDTCSPIVGCQVLSFS-------- 366
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E E+ + + VR+ DPDI GY I YLL R L + L RI ++
Sbjct: 367 ---KENEMLEKWADFVRELDPDIFTGYNINNFDLPYLLNRAKHLSVKNFHYLGRIKDI-- 421
Query: 411 RNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
R+ +++V +N + GR+ +L +L + L+SYT + +H L E+
Sbjct: 422 RSVVKEQVLQSKQLGRRENKSINTEGRVPFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKE 481
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
+++ + + + V Y ++ + +RL+++L + EMAR+ G+
Sbjct: 482 DVHHSVISDLQHGNSQTRRRLAV--YCLKDAYLPLRLMDKLMCLINYMEMARVTGVPLSS 539
Query: 521 VLSRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR +R +FV S + ++ + A ++EP+ Y PI
Sbjct: 540 LLTRGQQIKVVSQLLRKAREKDFVIPTYSGTTQEEQYEGA-----TVIEPKKGYYDIPIA 594
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C+++ L G E LG++ T
Sbjct: 595 TLDFSSLYPSIMMAHNLCYTSLLQPGMKEKLGLTPD--------------------QYTR 634
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+G F+ S+R G+LP++L+ +L R K +K
Sbjct: 635 TPAGNFFIKPSVRKGLLPEILENLLAARKKAKADLK 670
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y PI LDF SLYPS+++A+N C+++ L G E LG++
Sbjct: 589 YDIPIATLDFSSLYPSIMMAHNLCYTSLLQPGMKEKLGLT 628
>gi|156407049|ref|XP_001641357.1| predicted protein [Nematostella vectensis]
gi|156228495|gb|EDO49294.1| predicted protein [Nematostella vectensis]
Length = 1092
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 197/439 (44%), Gaps = 67/439 (15%)
Query: 256 SRALLKPDPAYDEVKAIFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKP- 305
SR L+ D A+DE L + PE D K+ + I G++ PE P
Sbjct: 272 SRCQLEVDVAWDE-------LISHEPEGDWSKIAPVRILSFDIECAGRKGIFPEAEKDPV 324
Query: 306 IQM-NFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKE--LFSIF 362
IQ+ N V +RQ + D I ++ H +S +KE LF +
Sbjct: 325 IQIANMV-------------IRQGEKDPFIRNVFTLGGCAPIVGSHVLSFDKEADLFKAW 371
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-------TEVEKRNSSR 415
E V++ DPDI+ GY I YLL R L +N L RI T ++ +
Sbjct: 372 SEFVQECDPDIITGYNIVNFDLPYLLNRATALHVNNFSLLGRIVADKSTVTSTTFQSKAY 431
Query: 416 DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
+ +N + + GR+ +L +L + L+SYT + +H L E+ +++
Sbjct: 432 GKRENKVINISGRVQFDLLHVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHNIISDLQNGN 491
Query: 476 THLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + + Y ++ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +
Sbjct: 492 DQTRRRLAI--YCMKDAILPLRLLEKLMCVINYMEMARVTGVPMGYLLSRGQQIKVMSQL 549
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
LR + + V + +A + ++EP Y PI LDF SLYPS+++A+N
Sbjct: 550 LRKTHQTDLVIPA----HKAEAGEEYAGATVIEPNKGYYNIPIATLDFSSLYPSIMMAHN 605
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILP 654
C+++ L + V ++ P I +PSG FV KS+R G+LP
Sbjct: 606 LCYTSLLHPSQ---VKETPPDQYIK-----------------TPSGNFFVKKSVRKGLLP 645
Query: 655 KMLQEILDTRLMVKQSMKE 673
++L+ +L R K +K+
Sbjct: 646 EILEHLLTARKKAKADLKK 664
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C+++ L
Sbjct: 584 YNIPIATLDFSSLYPSIMMAHNLCYTSLL 612
>gi|410902099|ref|XP_003964532.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Takifugu
rubripes]
Length = 1104
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 157/329 (47%), Gaps = 33/329 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT------ 406
+ E +L + E +R DPDI+ GY I+ + YLL R L +N L RI
Sbjct: 376 TQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAATLKVNPFPYLGRIRNSKSVL 435
Query: 407 -EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ ++ +N + M GR+ +L ++L + L+SYT + +H L E+
Sbjct: 436 RDLNFQSKQMGRRENKTMNMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQH 495
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + V Y ++ + +RL+++L + EMAR+ G+ +LSR
Sbjct: 496 SIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLQKLMCVINYMEMARVTGVPLTYLLSR 553
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR + + V P +K + ++EPE Y+ PI LDF S
Sbjct: 554 GQQIKVVSQLLRQAMKQDLVM--PVVKTEGG--EDYTGATVIEPEKGYYSIPIATLDFSS 609
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L + DS ++ +P+G FV
Sbjct: 610 LYPSIMMAHNLCYTTLLQNTQD---KDSLS----------------PEDFIKTPTGNFFV 650
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S+R G+LP++L+ +L R K +K+
Sbjct: 651 KSSVRKGLLPEILENLLSARKRAKAELKK 679
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+ PI LDF SLYPS+++A+N C++T L
Sbjct: 598 YSIPIATLDFSSLYPSIMMAHNLCYTTLL 626
>gi|428182790|gb|EKX51650.1| DNA polymerase delta catalytic subunit [Guillardia theta CCMP2712]
Length = 985
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 35/337 (10%)
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-- 405
E H +E E+ + + V DPDIL GY I YL++R L + L R+
Sbjct: 243 EVHSFEDESEMLQGWRDFVIACDPDILTGYNIVGFDIPYLMDRAKALKVASFPVLGRMKN 302
Query: 406 --TEVEKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
T+++K S ++ + ++ + GR++ ++ + ++ E L SYT ++ L E+
Sbjct: 303 SKTKIKKTTFSSAQMGTRETNEISIDGRVIFDVLQAIQREYKLHSYTLNSVCAKFLGEQK 362
Query: 461 P--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS L E R L + + YL + RL+++L FI EMAR+ G+
Sbjct: 363 EDVHHSIISDLQNGDAESRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMARVTGV 417
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+L RG +V S +LR +R + P++K + E +++EP+ Y+DP
Sbjct: 418 PIGWLLVRGQMLKVMSQLLRKARSKGLLL--PNLKVESTDEKFEG-AIVIEPKKGFYSDP 474
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS+++A+N C+ST + + E L ++ F F + +T+
Sbjct: 475 IATLDFASLYPSIMMAHNLCYSTLVSK-EDLR-TNKFNF--------------TPEQITV 518
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P G FV S++ GILP++L E+L R K +K+
Sbjct: 519 TPHGDTFVKPSVKKGILPEILDELLAARKRAKADLKK 555
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P K +ST F+ + + Y+DPI LDF SLYPS+++A+N C+ST + +
Sbjct: 447 PNLKVESTDEKFEGAIV--IEPKKGFYSDPIATLDFASLYPSIMMAHNLCYSTLVSK 501
>gi|324120740|dbj|BAJ78761.1| DNA polymerase delta catalytic subunit [Bemisia tabaci]
Length = 1094
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 37/361 (10%)
Query: 325 VRQWDPDILIGYEIETFSWGYLLERHFVS--NEKELFSIFIENVRQWDPDILIGYEIETL 382
V+Q +P+I I ++ +S E EL + + VR+ DPD+ GY I
Sbjct: 332 VQQGEPEIFIRNVFTLKECAPIVGCQVISCDTEMELLQRWSDFVRESDPDVFTGYNINNF 391
Query: 383 SWGYLLERGYVLGLNLNQELSRITE---------VEKRNSSRDEVKNTQLQMPGRIVINL 433
+ YL+ R L ++ L RI + ++ + R E KN + GR+ +L
Sbjct: 392 DFPYLINRAKHLNVHNFSFLGRIKDTRSVIKDQIIQSKQMGRRENKNINFE--GRVPFDL 449
Query: 434 WRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTG 493
+L + L+SYT + YH L E+ ++T E + + V Y ++
Sbjct: 450 LFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHNMITELQEGTAQTRRRLAV--YCLKDAY 507
Query: 494 I-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ 552
+ IRL+E+L EMAR+ G+ +L+RG Q +V S +LR +R F+ + + Q
Sbjct: 508 LPIRLLEKLMCFINYMEMARVTGVPLASLLTRGQQIKVVSQLLRKAREKGFLMPTHTGGQ 567
Query: 553 RAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 612
+ + ++EP+ Y +PI LDF SLYPS+++A+N C++T L + D
Sbjct: 568 QDDQFEGAT---VIEPKKGYYNEPIATLDFSSLYPSIMMAHNLCYTTLL----QPNMKDK 620
Query: 613 FPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
LN+S K +P+ FV S+R G+LP++L ++L R K +K
Sbjct: 621 -------LNLSPDMYVK-------TPAQNFFVKSSVRKGLLPEILDDLLTARKKAKADLK 666
Query: 673 E 673
+
Sbjct: 667 K 667
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 585 YNEPIATLDFSSLYPSIMMAHNLCYTTLL 613
>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
Length = 984
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E+EL + VR+ DPDIL GY I YLL R L + + L R+T +
Sbjct: 254 EQELLDKWASFVRELDPDILTGYNINNFDIPYLLNRASHLKVKNFEYLGRVTNIRSVIKE 313
Query: 411 ---RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
++ + +N + GR+ +L +L + L+SYT + YH L E+ +
Sbjct: 314 TVIQSKQMGKRENKYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSI 373
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + R L + + YL +RL+ +L + EMAR+ G+ +L+
Sbjct: 374 ITDLQNENEQTRRRLAMYCLKDAYLP-----LRLLNKLMCVVNYMEMARVTGVPLSCLLT 428
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S +LR S++ ++ PS E +I EP+ Y DPI LDF
Sbjct: 429 RGQQIKVMSQLLRKSKVCGYLI--PSYHGSGSDEQYEGATVI-EPKRGYYADPISTLDFA 485
Query: 584 SLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+++A+N C++T L E L ++D +T +P+
Sbjct: 486 SLYPSIMMAHNLCYTTLLQPANKEKLHLTDD--------------------QITRTPTNN 525
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R GILP++L+ +L R K +K
Sbjct: 526 VFVKSSVRKGILPEILESLLAARKRAKADLK 556
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+++A+N C++T L
Sbjct: 475 YADPISTLDFASLYPSIMMAHNLCYTTLL 503
>gi|351727343|ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA polymerase delta catalytic subunit
gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine max]
Length = 1088
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 190/405 (46%), Gaps = 67/405 (16%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENV---RQWDPDILIGYEIETFSWGYLL 347
G++ PE P IQ+ N V+ + E FI NV + P ++G ++ F
Sbjct: 282 GRKGHFPEPTHDPVIQIANLVTLQGE-DQPFIRNVMTLKSCSP--IVGVDVMPFE----- 333
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
E+E+ + + +R+ DPDI+IGY I YL+ER LN +++
Sbjct: 334 ------TEREVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERA------LNLKIAEFPI 381
Query: 408 VEKRNSSRDEVKNT-------------QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYH 454
+ + +SR VK+T ++ + GR+ +L ++++ + L SY+ ++ H
Sbjct: 382 LGRIRNSRVRVKDTTFSSRQYGTRESKEVAVEGRVTFDLLQVMQRDYKLSSYSLNSVSSH 441
Query: 455 VLHERIP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
L E+ HS L E R L + + YL + RL+++L FI EM
Sbjct: 442 FLSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEM 496
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES 570
AR+ G+ +LSRG +V S +LR +R N V P+ KQ + +LE +
Sbjct: 497 ARVTGVPISFLLSRGQSIKVLSQLLRRARQKNLVI--PNAKQAGSEQGTFEGATVLEARA 554
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y PI LDF SLYPS+++AYN C+ T + P LN+ S+ +
Sbjct: 555 GFYEKPIATLDFASLYPSIMMAYNLCYCTLV-----------IPEDARKLNIPPESVNR- 602
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG FV +++ GILP++L+E+L R K +KE K
Sbjct: 603 ------TPSGETFVKSNLQKGILPEILEELLTARKRAKADLKEAK 641
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 552 ARAGFYEKPIATLDFASLYPSIMMAYNLCYCT 583
>gi|324120716|dbj|BAJ78749.1| DNA polymerase delta catalytic subunit [Teleogryllus emma]
Length = 1089
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 54/396 (13%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ N V N+ + F+ NV D ++G ++ +F
Sbjct: 309 GRKGIFPEAQQDPVIQIANMVINQGD-HEPFLRNVFTLDTCAPIVGCQVLSFK------- 360
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
E+++ + + VR+ DPD+ GY I + YLL+R L L RI +++
Sbjct: 361 ----EERDMLEKWADFVREVDPDLFTGYNINNFDFPYLLDRSKHLNAKNFHFLGRIKDIK 416
Query: 410 K-------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
++ +N + M GR++ +L +L + L+SYT + +H L E+
Sbjct: 417 SVVKEQILQSKQMGRRENKSVNMEGRVLFDLLLVLVRDYKLRSYTLNAVSFHFLQEQKED 476
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEV 521
+++ + + V Y ++ + +RL+++L I EMAR+ G+ +
Sbjct: 477 VHHNIISDLQHGDPQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSCL 534
Query: 522 LSRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
L+RG Q +V S +LR ++ ++ A S +++ + A ++EP+ Y+DPI
Sbjct: 535 LTRGQQIKVVSQLLRTAKPKGYLMPAYSSGVQEEQYEGA-----TVIEPKKGYYSDPITT 589
Query: 580 LDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++A+N C++T L G E L ++ Q T +
Sbjct: 590 LDFSSLYPSIMMAHNLCYTTLLPSGMKEKLSLT--------------------QDQFTKT 629
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
P+G FV +R G+LP++L+ +L R K +K+
Sbjct: 630 PAGNFFVKAPVRKGLLPEILENLLGARKRAKADLKK 665
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y+DPI LDF SLYPS+++A+N C++T L G E L ++ D F
Sbjct: 583 YSDPITTLDFSSLYPSIMMAHNLCYTTLLPSGMKEKLSLTQDQF 626
>gi|324120684|dbj|BAJ78733.1| DNA polymerase delta catalytic subunit [Lepidocampa weberi]
Length = 1096
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 37/331 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQELSRI 405
++EKEL + E VRQ DPD++ GY I YLL R LG + Q S +
Sbjct: 367 NDEKELLEKWAEFVRQVDPDLITGYNINNFDLPYLLNRAKCLGSKHFSFLGRVIQSRSVV 426
Query: 406 TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+V ++ +N + + GR+ +L +L + L+SYT ++ +H L E+
Sbjct: 427 HDVTLQSKQMGRRENKSINIEGRVPFDLLLVLLRDYKLRSYTLNSVSFHFLQEQKEDVHH 486
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + + Y ++ + +RL+++L I EMAR+ G+ +L+R
Sbjct: 487 SIISDLHHGNAQTRRRLAI--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVPLSSLLTR 544
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR ++ N + P+ + + E +I EP Y PI LDF S
Sbjct: 545 GQQVKVMSQILRKAKTQNLIV--PTYQSKGSDEQFEGATVI-EPVKGYYNVPIATLDFSS 601
Query: 585 LYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
LYPS+++A+N C++T + G ++L +D IR +PSG
Sbjct: 602 LYPSIMMAHNLCYTTLVRPGLDKNLNPTD-----------YIR-----------TPSGNL 639
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV ++R G+LP +L+ +L R K +K+
Sbjct: 640 FVKSALRKGLLPDILENLLSARKKAKDDLKK 670
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S + R K + PT ++K + F+ Y PI LDF SLYPS+++A
Sbjct: 552 SQILRKAKTQNLIVPTYQSKGSDEQFEGATVIEPVKG--YYNVPIATLDFSSLYPSIMMA 609
Query: 131 YNYCFST 137
+N C++T
Sbjct: 610 HNLCYTT 616
>gi|168019806|ref|XP_001762435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686513|gb|EDQ72902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1173
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 183/398 (45%), Gaps = 56/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + V E+ + ++ P ++G ++ +F
Sbjct: 377 GRKGHFPEPEHDPVIQIANLVTVQGEQRPMVKNVMTLKSCSP--IVGADVMSFD------ 428
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGY--------VLGLNLNQ 400
EKE+ + E V + DPDI+IGY I YL+ER +LG N
Sbjct: 429 -----TEKEVLLAWRELVTEVDPDIIIGYNICKFDLPYLIERAQKLNVVEFPMLGRIRNS 483
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
L RI + + ++ ++ + GR+ +L + ++ + L SY+ ++ H L E+
Sbjct: 484 RL-RIKDASFSSRQYGIRESKEVTIEGRVQFDLLQAIQRDYKLSSYSLNSVSAHFLGEQK 542
Query: 461 P--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS L E R L + + YL + RL+++L F+ EMAR+ G+
Sbjct: 543 EDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQ-----RLLDKLMFVYNYVEMARVTGV 597
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK-QRAHMRAPESLPLILEPESRLYTD 575
+L+RG +V S +LR S+ NFV P++K Q A +L+ ++ Y
Sbjct: 598 PISFLLARGQSIKVLSQLLRKSKQRNFVL--PNVKSQGAGGGETFEGATVLDAKAGYYDK 655
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++AYN C+ T L R E L F G + +T
Sbjct: 656 PIATLDFASLYPSIMMAYNLCYCT-LVRAEDL---QKFMLG--------------PEEVT 697
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+PSG FV S+ GILP++L+E+L R K +KE
Sbjct: 698 KTPSGDVFVKPSLEKGILPEILEELLAARKRAKADLKE 735
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 89 NKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
N ++ + + F ++ ++ Y PI LDF SLYPS+++AYN C+ T L R E L
Sbjct: 628 NVKSQGAGGGETFEGATVLDAKAGYYDKPIATLDFASLYPSIMMAYNLCYCT-LVRAEDL 686
>gi|302801963|ref|XP_002982737.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
gi|300149327|gb|EFJ15982.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
Length = 980
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 157/318 (49%), Gaps = 36/318 (11%)
Query: 367 RQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--TEVEKRN---SSRDEV--K 419
R+ PDI+IGY I YL+ER LG+ L RI + V R+ SSR +
Sbjct: 265 RKLTPDIIIGYNICKFDMPYLIERAQKLGIVEFPVLGRIRNSRVRVRDATFSSRQYGIRE 324
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHS--WKLLTCWWEHR 475
+ ++ + GR+ +L + ++ + L SY+ ++ H L E+ HS L E R
Sbjct: 325 SKEVLIEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIIADLQNGNSETR 384
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
L + + YL + RL+E+L FI EMAR+ G+ +LSRG +V S +L
Sbjct: 385 RRLAVYCLKDAYLPQ-----RLLEKLMFIYNYIEMARVTGVPISFLLSRGQSIKVLSQIL 439
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R R NFV P+IK + + +LE + Y PI LDF SLYPS+++AYN
Sbjct: 440 RKCRQRNFVV--PNIKGQGAGQETFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNL 497
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPK 655
C+ T L R E LN++ +N+ +PSG FV ++ GILP+
Sbjct: 498 CYCT-LVRTEDQA----------RLNIA-------PENVNKTPSGETFVKTNMEKGILPE 539
Query: 656 MLQEILDTRLMVKQSMKE 673
+L+E+L R + +KE
Sbjct: 540 ILEELLAARKRARADLKE 557
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 470 ARAGFYEKPIATLDFASLYPSIMMAYNLCYCT 501
>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
Length = 999
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 35/330 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI------- 405
+ E+++ + VR+ DPDI GY I + YL+ R L + + L RI
Sbjct: 270 NTEQKMLEAWSSFVREVDPDIFTGYNINNFDFPYLINRAKHLKVKDFEYLGRIKNIRSVV 329
Query: 406 --TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
T ++ + R E K T + GR ++ +L + L+SYT + YH L E+
Sbjct: 330 KDTVLQSKQMGRRENKTTNFE--GRAPFDVLLVLIRDYKLRSYTLNAVSYHFLQEQKEDV 387
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + IRL+E+L I EMAR+ G+ +L
Sbjct: 388 HHNIITDLQNGNPQTRRRLAV--YCLKDAYLPIRLLEKLMCIINYMEMARVTGVSLSSLL 445
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V S +LR +R ++ P+ + E +I EP+ Y DPI+ LDF
Sbjct: 446 TRGQQIKVVSQLLRKAREQGYLM--PAYQGVGQDEQFEGATVI-EPKKGYYADPIVTLDF 502
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+++A+N C++T L D F + +P+
Sbjct: 503 SSLYPSIMMAHNLCYTTLL----QGNAKDKFGL--------------TEDQYLKTPTANF 544
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV KS+R G+LP++L+ +L R K +K
Sbjct: 545 FVRKSVRKGLLPEILENLLAARKRAKADLK 574
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI+ LDF SLYPS+++A+N C++T L
Sbjct: 493 YADPIVTLDFSSLYPSIMMAHNLCYTTLL 521
>gi|324120766|dbj|BAJ78774.1| DNA polymerase delta catalytic subunit [Panorpa takenouchii]
Length = 1093
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 194/440 (44%), Gaps = 66/440 (15%)
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRTKPI 306
ISR L+ D A+D+ ++ P E KV I G++ PE + P+
Sbjct: 269 ISRCQLEVDVAWDQ------FIAHEPEGEWAKVAPFRILSFDIECAGRKGIFPEAQHDPV 322
Query: 307 ----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
M E E F + + P ++G ++ FS+ E ++ +
Sbjct: 323 IQIANMVIRQGENEPFLRNVFTLNTCAP--IVGSQV--FSY---------EKENKMLEKW 369
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK-------RNSSR 415
+ VRQ DPDI GY I + YLL R L + + L RI +++ ++
Sbjct: 370 ADFVRQLDPDIFTGYNINNFDFPYLLNRANHLKVKNFEYLGRIKDIKSVVKELVIQSKQM 429
Query: 416 DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
+N + GR+ +L +L + L+SYT + YH L E+ ++T
Sbjct: 430 GRRENKSVNFEGRVPFDLLLVLLRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITDLQNES 489
Query: 476 THLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
+ + V Y ++ + +RL+ +L I EMAR+ G+ +L+RG Q +V S +
Sbjct: 490 DQTRRRLAV--YCLKDAYLPLRLLNKLMCIVNYMEMARVTGVPLSCLLTRGQQIKVVSQL 547
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
LR S+ ++ P + E +I EP+ Y DPI LDF SLYPS+++A+N
Sbjct: 548 LRKSKEAGYLM--PVHTGQGSDEQYEGATVI-EPKRGYYADPISTLDFASLYPSIMMAHN 604
Query: 595 YCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
C++T L + LG++D +T +PS FV S+R G+
Sbjct: 605 ICYTTLLAPSNRDKLGLTDD--------------------QITKTPSNNFFVKGSVRRGL 644
Query: 653 LPKMLQEILDTRLMVKQSMK 672
LP++L+ +L R K +K
Sbjct: 645 LPEILESLLTARKRAKNELK 664
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG--RVEHLGVSD 149
Y DPI LDF SLYPS+++A+N C++T L + LG++D
Sbjct: 583 YADPISTLDFASLYPSIMMAHNICYTTLLAPSNRDKLGLTD 623
>gi|324500650|gb|ADY40299.1| DNA polymerase delta catalytic subunit [Ascaris suum]
Length = 1091
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 39/334 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN--------LNQELSRI 405
NE EL + E VR DPDI+ GY I+ Y+++R L + + LS++
Sbjct: 356 NEHELLEKWAEFVRILDPDIVTGYNIQNFDIPYIIDRAKALKIESKVAMLGRVPSSLSKV 415
Query: 406 TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ + N M GR++ ++ +++ + L+SY+ ++ YH L E+ +
Sbjct: 416 RDMPVSSKQMGNRTNKYTSMEGRVIFDVMQVVLRDYKLRSYSLNSVSYHFLGEQKEDVDY 475
Query: 466 KLLTCWWEH----RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
L+ R L + + YL +RL+++L + EMAR+ G+ +
Sbjct: 476 SLIADLQNGTPLTRRRLAVYCMKDAYLP-----LRLLQKLMSVINYIEMARVTGVPLDYL 530
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
LSRG Q +V S +LR ++ ++F + A ++EP Y PI LD
Sbjct: 531 LSRGQQVKVMSQLLRKAKSHHFFV---PVMDAAQTDDTFEGATVIEPIRGFYAVPIATLD 587
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPSV+IA+N C++T I S + LK + + +SPS
Sbjct: 588 FASLYPSVMIAHNICYTT-----------------LIQGQPSAQGLK--EDDFEVSPSNN 628
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV ++R G+LP++L+++L R K +K K
Sbjct: 629 RFVKANVRRGLLPEILEDLLSARKRAKADLKNEK 662
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPSV+IA+N C++T +
Sbjct: 578 FYAVPIATLDFASLYPSVMIAHNICYTTLI 607
>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
Length = 1111
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 34/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--- 410
NE+E+ + E VR+ DPDI+ GY I YL+ R L L RIT ++
Sbjct: 381 NEREMLLKWSEFVREVDPDIITGYNINNFDLPYLINRAKHLKAAHFPYLGRITNIQSVIK 440
Query: 411 ------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ + R E N + + GR+ +L +L + L+SYT + YH L E+
Sbjct: 441 EQVMQSKQTGRRE--NKLINIEGRVPFDLLMVLVRDYKLRSYTLNAVSYHFLQEQKEDVH 498
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+++ + + + Y ++ + +RL+++L + EMAR+ G+ +L+
Sbjct: 499 HNIISDLQNGNPQTRRRLAI--YCLKDAYLPLRLLDKLMCVINYMEMARVTGVSLGSLLT 556
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S +LR ++ ++ P+ + ++EP Y+DPI LDF
Sbjct: 557 RGQQIKVVSQLLRKAKEKGYLM--PTYQHSGGGDEQFEGATVIEPRKGYYSDPIATLDFS 614
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+++A+N C++T L G+ + L+ +P+G F
Sbjct: 615 SLYPSIMMAHNLCYTTLL----QGGIKE--------------KLELTPDQYVKTPAGNFF 656
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V ++R G+LP++L+ +L R K+ +K+
Sbjct: 657 VTAAVRKGLLPEVLESLLAARKHAKEELKQ 686
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R Y+DPI LDF SLYPS+++A+N C++T L
Sbjct: 600 RKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLL 632
>gi|324120732|dbj|BAJ78757.1| DNA polymerase delta catalytic subunit [Thrips palmi]
Length = 1091
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 159/331 (48%), Gaps = 39/331 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E E+ + + VR+ DPDI GY I + YL+ R L + L R+ +++
Sbjct: 361 ETEMLEKWADFVREVDPDIFTGYNITNFDFPYLINRAKHLTVKNFTYLGRVKDIQSVIKE 420
Query: 411 -----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ R E KN + GR+ +L +L + L+SYT + YH L E+
Sbjct: 421 SQLFSKQMGRRENKNVNFE--GRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHH 478
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++T + + + V Y ++ + +RL+E+L I EMAR+ G+ +L+R
Sbjct: 479 SVITDLQNGTSQTRRRLAV--YCLKDAYLPLRLLEKLMCIINYMEMARVTGVTLGSLLTR 536
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR ++ ++++ P+ + E +I EP+ Y DPI LDF S
Sbjct: 537 GQQIKVVSQLLRKAKEHDYIM--PTYQSTGGDDQYEGATVI-EPKRGYYGDPISTLDFSS 593
Query: 585 LYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
LYPS+++A+N C++T L E LG++ + +P+
Sbjct: 594 LYPSIMMAHNLCYTTLLQANNREKLGLT--------------------PDQYSHTPANNY 633
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+R G+LP++L+ +L+ R K +K+
Sbjct: 634 FVKASVRKGLLPEILESLLNARKKAKADLKK 664
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y DPI LDF SLYPS+++A+N C++T L E LG++
Sbjct: 582 YGDPISTLDFSSLYPSIMMAHNLCYTTLLQANNREKLGLT 621
>gi|221505528|gb|EEE31173.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 3940
Score = 125 bits (315), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/122 (46%), Positives = 87/122 (71%)
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+++ L RV + LI+ + + RT+E+ARL+G F+ L+RGSQF+VES+M++ ++ ++
Sbjct: 2873 LKYLLGRVRMTLALIDSTELLPRTAELARLYGCDFFSALTRGSQFKVESVMIQATKRLDY 2932
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+ VSPS Q AP +PL+LEP+S Y P++VLDF+SLYPS++IA N C+ST LG
Sbjct: 2933 LFVSPSQTQVTEQPAPLCIPLVLEPKSGFYWSPVLVLDFRSLYPSIVIANNICYSTALGS 2992
Query: 604 VE 605
VE
Sbjct: 2993 VE 2994
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLN 687
L + PSG FV + +R GI P++L EIL TR+MV++++K+YK E L L +LN
Sbjct: 3080 LRLLPSGAMFVSRRVRKGIFPQVLSEILQTRIMVQKAIKKYKVEEGL--LRLLN 3131
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y P++VLDF+SLYPS++IA N C+ST LG VE
Sbjct: 2961 FYWSPVLVLDFRSLYPSIVIANNICYSTALGSVE 2994
>gi|237838597|ref|XP_002368596.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211966260|gb|EEB01456.1| DNA polymerase zeta catalytic subunit, putative [Toxoplasma gondii
ME49]
Length = 3952
Score = 125 bits (314), Expect = 7e-26, Method: Composition-based stats.
Identities = 57/122 (46%), Positives = 87/122 (71%)
Query: 484 VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF 543
+++ L RV + LI+ + + RT+E+ARL+G F+ L+RGSQF+VES+M++ ++ ++
Sbjct: 2883 LKYLLGRVRMTLALIDSTELLPRTAELARLYGCDFFSALTRGSQFKVESVMIQATKRLDY 2942
Query: 544 VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
+ VSPS Q AP +PL+LEP+S Y P++VLDF+SLYPS++IA N C+ST LG
Sbjct: 2943 LFVSPSQTQVTEQPAPLCIPLVLEPKSGFYWSPVLVLDFRSLYPSIVIANNICYSTALGS 3002
Query: 604 VE 605
VE
Sbjct: 3003 VE 3004
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y P++VLDF+SLYPS++IA N C+ST LG VE
Sbjct: 2971 FYWSPVLVLDFRSLYPSIVIANNICYSTALGSVE 3004
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
L + PSG FV + +R GI P++L EIL TR+MV++++K+YK
Sbjct: 3090 LRLLPSGAMFVSRRVRKGIFPQVLSEILQTRIMVQKAIKKYK 3131
>gi|324120746|dbj|BAJ78764.1| DNA polymerase delta catalytic subunit [Neocolochelyna itoi]
Length = 1003
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 177/395 (44%), Gaps = 48/395 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + F+ NV D +IG ++ +F
Sbjct: 220 GRKGIFPEASHDPVIQIANMVIRHGDTEPFLRNVFTLDTCAPIIGSQVLSFQ-------- 271
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E + + + VRQ DPD+ GY I + YL+ R L + L RI ++
Sbjct: 272 ---KEAIMLEKWADFVRQCDPDVFTGYNINNFDFPYLINRAQHLKVKSFSYLGRIKDI-- 326
Query: 411 RNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
++ +D+V +N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 327 KSVIKDQVLQSKQMGRRENKHVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKE 386
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + V Y ++ + +RL+++L I EMAR+ G+
Sbjct: 387 DVHHSIITDLQNGNPQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLCS 444
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L++G +V S +LR +R ++ P+ + + E +I EP+ Y DPI L
Sbjct: 445 LLTKGQGVKVVSQLLRKARERGYLM--PTHQGQGTDEQYEGATVI-EPKRGYYNDPIATL 501
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
D+ SLYPS+I+A+N C++T LG LK + T +P+
Sbjct: 502 DYSSLYPSIIMAHNICYTTLLGPATQ------------------HKLKLTEDKYTRTPTT 543
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV S+R G+LP++L+ +L R K +K K
Sbjct: 544 AMFVKSSVRKGLLPEILENLLTARKAAKTELKNEK 578
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + PT + + T ++ + Y DPI LD+ SLYPS+I+A
Sbjct: 456 SQLLRKARERGYLMPTHQGQGTDEQYEGATV--IEPKRGYYNDPIATLDYSSLYPSIIMA 513
Query: 131 YNYCFSTCLG 140
+N C++T LG
Sbjct: 514 HNICYTTLLG 523
>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
Length = 1092
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 158/333 (47%), Gaps = 41/333 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+ E+EL + VR+ DPDIL GY I YLL R L ++ + L RIT + R+
Sbjct: 360 NTEQELLDQWANFVRELDPDILTGYNINNFDIPYLLNRASHLKVSRFEYLGRITNI--RS 417
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+D V +N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 418 VIKDTVIQSKQMGRRENKYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQKEDV 477
Query: 464 SWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T + R L + + YL +RL+ +L I EMAR+ G+
Sbjct: 478 HHSIITDLQNESEQTRRRLAMYCLKDAYLP-----LRLLNKLMCIVNYMEMARVTGVPLS 532
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q +V S +LR S++ ++ PS + E +I EP+ Y PI
Sbjct: 533 CLLTRGQQIKVMSQLLRKSKVAGYLI--PSYQSSGSEEQYEGATVI-EPKRGYYAKPIST 589
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T + P LN++ LT +P+
Sbjct: 590 LDFASLYPSIMMAHNLCYTTLVQ-----------PNMKDKLNLT-------PDQLTHTPA 631
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP++L+ +L R K +K
Sbjct: 632 NNVFVKASVRKGLLPEILESLLAARKRAKADLK 664
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 583 YAKPISTLDFASLYPSIMMAHNLCYTT 609
>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
Length = 1002
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 45/337 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-------- 405
E+EL + +R+ DPD+ GY I + YLL R L + L R+
Sbjct: 271 KEEELLEAWAAFIRELDPDVFTGYNINNFDFPYLLRRAAHLKVKNFDFLGRVRDKKSVLK 330
Query: 406 -TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--L 462
T ++ + R E N + GR+ +L +L + L+SYT + +H L E+
Sbjct: 331 ETVLQSKQMGRRE--NYAINFEGRVPFDLLLVLLRDYKLRSYTLNAVSFHFLQEQKEDVH 388
Query: 463 HSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
HS L + R L + + YL +RL+ +L I EMAR+ G+
Sbjct: 389 HSIISDLQAGNEQTRRRLAMYCLKDAYLP-----LRLLNKLMCIVNYMEMARVTGVPLGC 443
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR S+ ++ P+ + E +I EP Y DP+ L
Sbjct: 444 LLTRGQQIKVVSQLLRKSKEAGYLM--PTYSGQGSEEQYEGATVI-EPRRGYYADPVSTL 500
Query: 581 DFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C++T + G+ E LG++D +T +P
Sbjct: 501 DFASLYPSIMMAHNLCYTTLIQPGQKEKLGLTDD--------------------QVTRTP 540
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
S FV S+R G+LP++L+ +L R K +++ K
Sbjct: 541 SNNLFVKSSVRKGLLPEILESLLSARKKAKADLRDEK 577
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
R Y DP+ LDF SLYPS+++A+N C++T + G+ E LG++D
Sbjct: 489 RRGYYADPVSTLDFASLYPSIMMAHNLCYTTLIQPGQKEKLGLTD 533
>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
Length = 1092
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 180/399 (45%), Gaps = 58/399 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLL 347
G++ PE + P+ M E+E FI NV D +IG ++
Sbjct: 305 GRKGIFPEAKMDPVIQIANMVIRQGERE---PFIRNVFTLDECAPIIGSQVLCHD----- 356
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
E +L + VR+ DPDIL GY I YLL R L + + L RI
Sbjct: 357 ------KETQLLDRWSAFVREVDPDILTGYNINNFDIPYLLNRAAHLKVKNFEYLGRIKN 410
Query: 408 VEKRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
+ R+ +++V +N + GR+ +L +L + L+SYT + YH L E
Sbjct: 411 I--RSVIKEQVIQSKQMGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQE 468
Query: 459 RIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ ++T + R L + + YL +RL+E+L I EMAR+
Sbjct: 469 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVT 523
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ +L+RG Q +V S +LR +R F+ PS + E +I EP+ Y
Sbjct: 524 GVPLESLLTRGQQIKVMSQLLRKARTKGFIM--PSYTSQGSDEQFEGATVI-EPKRGYYA 580
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN- 633
DPI LDF SLYPS+++A+N C++T + LG + +R + LQ +
Sbjct: 581 DPISTLDFASLYPSIMMAHNLCYTTLV-----LGGTRE----------KLREQENLQDDQ 625
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ +P+ FV +R G+LP++L+ +L R K +K
Sbjct: 626 VERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTT 605
>gi|209882407|ref|XP_002142640.1| DNA polymerase family B [Cryptosporidium muris RN66]
gi|209558246|gb|EEA08291.1| DNA polymerase family B, putative [Cryptosporidium muris RN66]
Length = 1123
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 155/332 (46%), Gaps = 43/332 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR-N 412
NE++L + E + DPDIL GY YL ER + GL LSRIT +
Sbjct: 396 NEQDLLLAWREFIISIDPDILTGYNCINFDMFYLFERAKIFGLKNFFYLSRITSTKSVIK 455
Query: 413 SSRDEVK------NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
S+R K + + GRI +L +R E L+SYT + L E+ +
Sbjct: 456 STRFSSKAFGIHDSKSFNIEGRIFWDLLESIRREYKLKSYTLNYVSTTFLKEQKEDVHYS 515
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++ E K + V Y ++ + + +RL++ L EMAR+ G +LSRG
Sbjct: 516 MIHSLQEGTPETRKRIAV--YCLKDSLLPLRLMKHLKLFPNIIEMARVTGTTLDILLSRG 573
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL------PLILEPESRLYTDPIIV 579
Q +V S +LR + NF+ P++K R+ ES+ +LEP Y DPI
Sbjct: 574 QQIKVTSQILRKCKSLNFIM--PTLK-----RSGESVEDQYEGATVLEPVKGFYKDPIST 626
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS++IA+N C+ST + + +SD F SP+
Sbjct: 627 LDFASLYPSIMIAHNICYSTLVPSNDADHLSDDFKRK--------------------SPA 666
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G FV S+R GILP +++E++ R ++ M
Sbjct: 667 GHTFVLSSVRKGILPLIVEELILARKKARKEM 698
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y DPI LDF SLYPS++IA+N C+ST + + +SD F
Sbjct: 619 FYKDPISTLDFASLYPSIMIAHNICYSTLVPSNDADHLSDDF 660
>gi|66475912|ref|XP_627772.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5'
exonuclease; RNAseH fold [Cryptosporidium parvum Iowa
II]
gi|32399018|emb|CAD98258.1| DNA polymerase family B subunit, probable [Cryptosporidium parvum]
gi|46229188|gb|EAK90037.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5'
exonuclease; RNAseH fold [Cryptosporidium parvum Iowa
II]
Length = 1084
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 162/329 (49%), Gaps = 34/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
+EK++ + + + DPD++ GY YLLER + LN ++IT
Sbjct: 358 SEKDMLLAWKDFLLALDPDVITGYNCINFDMNYLLERAKLFQLNDFFFFTRLAKTKITSK 417
Query: 409 EKRNSSR--DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ R SSR ++ + + GRI+ ++ +R E L+SY+ + + L E+ +
Sbjct: 418 DTRFSSRAFGTHESKLINIEGRILWDILETIRREHKLKSYSLNYVSTNFLKEQKEDVHYS 477
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++ + K + + Y ++ + + +RL++ L EMAR+ G +LSRG
Sbjct: 478 MIRGLQDGNPETRKRIAI--YCLKDSILPLRLMKHLKLFPNIIEMARVTGTTIDILLSRG 535
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
Q +V S +LR + NF+ P++K ++ +LEP Y DPI LDF SL
Sbjct: 536 QQIKVTSQILRKCKSTNFLM--PTVKNQSDGDNQYEGATVLEPLKGFYKDPISTLDFASL 593
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL-TISPSGVAFV 644
YPS++IA+N C+ST + + +LK + ++L SP+G +FV
Sbjct: 594 YPSIMIAHNICYSTLIPPL---------------------NLKNVPEDLRKTSPTGHSFV 632
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S+R GILP +++E++ R K+ M+E
Sbjct: 633 LSSVRKGILPLIVEELIAARKKAKKEMEE 661
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS++IA+N C+ST +
Sbjct: 580 FYKDPISTLDFASLYPSIMIAHNICYSTLI 609
>gi|324120706|dbj|BAJ78744.1| DNA polymerase delta catalytic subunit [Aposthonia japonica]
Length = 1088
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 179/392 (45%), Gaps = 50/392 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + ++ FI NV D ++G ++ ++
Sbjct: 310 GRKGIFPEPNQDPVIQIANMVVKQGDHEPFIRNVFTLDTCAPIVGCQVLSYQ-------- 361
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E E+ + + +R+ DPDI GY I + YL++R L + L RI ++
Sbjct: 362 ---SETEMLEKWADFIRELDPDIFTGYNINNFDFPYLIQRAKYLNVRNFTYLGRIKNIQS 418
Query: 411 -------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++ +N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 419 VIKEQVLQSKQMGRRENKHVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDV 478
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + + V Y ++ + +RL+++L I EMAR+ G+ +L
Sbjct: 479 HHNIITDLQNGNSQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLSCLL 536
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q +V S +LR +R ++ S +++ + A ++EP Y DPI L
Sbjct: 537 TRGQQIKVVSQLLRKARDKGYLMPTYSGGVQEEQYEGA-----TVIEPLKGYYADPITTL 591
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T L G D ++ +PS
Sbjct: 592 DFSSLYPSIMMAHNLCYTTLL----QGGTKDKLS----------------PEDYVKTPSQ 631
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +S+R G+LP++L+ +L R K +K
Sbjct: 632 NFFVKESVRKGLLPEILESLLSARKKAKNDLK 663
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+++A+N C++T L
Sbjct: 584 YADPITTLDFSSLYPSIMMAHNLCYTTLL 612
>gi|327276010|ref|XP_003222764.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Anolis
carolinensis]
Length = 1100
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 48/336 (14%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-------- 405
E EL + E +R DPDI+ GY I+ YL+ R L ++ L RI
Sbjct: 369 KEGELLKAWAEFIRTVDPDIITGYNIQNFDLPYLINRAQTLKVSTFPFLGRIPARKSVIR 428
Query: 406 -TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ + + R E N + GR +L ++L + L+SYT + YH L E+
Sbjct: 429 DSSFQSKQMGRRE--NKVINTEGRAQFDLLQVLLRDYKLRSYTLNAVSYHFLQEQKEDVQ 486
Query: 465 WKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + R L + + YL +RL+E+L + EMAR+ G+
Sbjct: 487 HSIITDLQNGTEQSRRRLAVYCLKDAYLP-----LRLLEKLMCVINYMEMARVTGVPLSY 541
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR + N V P +K + ++EP Y PI L
Sbjct: 542 LLARGQQIKVVSQLLRQAVKQNLVM--PVVKSEGGEDYAGAT--VIEPLKGYYDVPIATL 597
Query: 581 DFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLTIS 637
DF SLYPS+++A+N C++T L G VE G+S D F IR +
Sbjct: 598 DFSSLYPSIMMAHNLCYTTLLQQGAVERHGLSADKF----------IR-----------T 636
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
P+G FV S+R G+LP++L+ +L R K +K+
Sbjct: 637 PTGDHFVKASVRKGLLPEILENLLAARKRAKTELKQ 672
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G VE G+S D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLQQGAVERHGLSADKF 633
>gi|354548476|emb|CCE45212.1| hypothetical protein CPAR2_702240 [Candida parapsilosis]
Length = 1080
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 159/332 (47%), Gaps = 37/332 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR--- 411
E+E+ + E V + DPD++IGY YLL+R L ++ R+ V++
Sbjct: 350 EEEMLLHWKEFVNEVDPDVIIGYNTANFDIPYLLDRARALKVHQFPYFGRLKSVKQEIKE 409
Query: 412 --NSSR--DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
SSR +N + + GR+ ++L + ++ E L+SYT ++ H L E+ +
Sbjct: 410 AIFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSI 469
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T E R L + + YL +RL+++L + +EMAR+ G+ F +LS
Sbjct: 470 ITDLQNGNKETRRRLAVYCLKDAYLP-----LRLLDKLMCLVNYTEMARVTGVPFSYLLS 524
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S + R + V P++K E +I EPE Y PI LDF
Sbjct: 525 RGQQIKVVSQLFRKCLQEDIVI--PNMKSEGSSEEFEGATVI-EPERGYYDVPIATLDFS 581
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+++A+N C++T L R SI++ +++ T +P+G F
Sbjct: 582 SLYPSIMMAHNLCYTTLLNR------------------NSIKAFDLKEEDYTKTPNGDYF 623
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
V + GILP +L E+L R K +K K
Sbjct: 624 VHADKKKGILPTILNELLTARKKAKTDLKNEK 655
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
+R Y D PI LDF SLYPS+++A+N C++T L R
Sbjct: 567 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNR 601
>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
Length = 1092
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 178/398 (44%), Gaps = 56/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P+ M E+E F + + Q P +IG ++
Sbjct: 305 GRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNQCAP--IIGSQVLCHD------ 356
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E ++ + VR+ DPDIL GY I + YL+ R L + + L RI +
Sbjct: 357 -----KETQMLDKWSAFVREVDPDILTGYNINNFDFPYLINRAAHLKVKNFEYLGRIKNI 411
Query: 409 ---------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 412 RSVIKEQMLQSKQMGRRE--NQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQ 469
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L I EMAR+ G
Sbjct: 470 KEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVTG 524
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG Q +V S +LR ++ F+ PS + E +I EP+ Y D
Sbjct: 525 VPLESLLTRGQQIKVLSQLLRKAKTKGFIM--PSYTSQGSDEQYEGATVI-EPKRGYYAD 581
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-L 634
PI LDF SLYPS+++A+N C++T + LG + +R + LQ + +
Sbjct: 582 PISTLDFASLYPSIMMAHNLCYTTLV-----LGGTRE----------KLREQENLQDDQV 626
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV +R G+LP++L+ +L R K +K
Sbjct: 627 ERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTT 605
>gi|324120686|dbj|BAJ78734.1| DNA polymerase delta catalytic subunit [Pedetontus unimaculatus]
Length = 1035
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 39/333 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---- 408
+ E EL + + VR+ DPDI+ GY I + YLL R LG+ L RI ++
Sbjct: 305 TKEAELLKRWADFVREADPDIVTGYNINNFDFPYLLNRAQHLGVKDFPFLGRIKDIRTVV 364
Query: 409 -----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + R E N + GR++ +L +L E L+SYT + +H L E+
Sbjct: 365 KETVLQSKQLGRRE--NKSINTEGRVLFDLLLVLVREYKLRSYTLNAVSFHFLQEQKEDV 422
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + + V Y ++ + + +RL+++L I EMAR+ G+ +L
Sbjct: 423 QHSIISDLQNGNSQTRRRLAV--YCLKDSYLPLRLLDKLMCIINYMEMARVTGVSLPSLL 480
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V S +LR +R +FV P+ + E +I EPE Y PI LDF
Sbjct: 481 TRGQQIKVVSQLLRKAREKDFVI--PTYQGTGSDEQYEGATVI-EPERGYYDVPIATLDF 537
Query: 583 QSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS+++A+N C++T L G V L ++ P I+ +P+G
Sbjct: 538 SSLYPSIMMAHNLCYTTLLQPGWVNKLQLT---PDRYIE-----------------TPAG 577
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV S+R G+LP++L+ +L R K+ +K+
Sbjct: 578 AMFVKASVRKGLLPEILESLLAARKKAKEDLKK 610
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTD-PIIVLDFQSLYPSVII 129
S L R + D PT + + ++ + +R Y D PI LDF SLYPS+++
Sbjct: 490 SQLLRKAREKDFVIPTYQGTGSDEQYEG---ATVIEPERGYYDVPIATLDFSSLYPSIMM 546
Query: 130 AYNYCFSTCL 139
A+N C++T L
Sbjct: 547 AHNLCYTTLL 556
>gi|324120748|dbj|BAJ78765.1| DNA polymerase delta catalytic subunit [Vespa analis insularis]
Length = 1105
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 158/333 (47%), Gaps = 39/333 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---- 408
+ E+EL + E +RQ DPDI GY I + YL+ R L + + L RI +
Sbjct: 373 NKEQELLQKWAEFIRQLDPDIFTGYNINNFDFPYLINRAKFLNVKDFEYLGRIKNIKSVI 432
Query: 409 -----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + R E K + GR+ +L +L + L+SY+ + YH L E+
Sbjct: 433 KNQILQSKQMGRREYKIINFE--GRVPFDLLLVLIRDYKLRSYSLNAVSYHFLQEQKEDV 490
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+++L I EMAR+ G+ +L
Sbjct: 491 HHSIITDLQNGNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLMCLL 548
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V S +LR R N++ P R E ++EP+ Y+DPI LDF
Sbjct: 549 TRGQQIKVVSQLLRKMREKNYLM--PVHTGRGSDEQFEG-GTVIEPKRGYYSDPIATLDF 605
Query: 583 QSLYPSVIIAYNYCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS+I+A+N C++T L + G+ ID +T +PS
Sbjct: 606 SSLYPSIIMAHNLCYTTLLTSEKQNKYGLK-------ID-------------EVTRTPSN 645
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV +++ G+LP++L+ +L R + K +K+
Sbjct: 646 SLFVKSTVKKGLLPEILENLLTARKVAKAELKK 678
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R M+ + P + + F+ + Y+DPI LDF SLYPS+I+A
Sbjct: 558 SQLLRKMREKNYLMPVHTGRGSDEQFEGGTV--IEPKRGYYSDPIATLDFSSLYPSIIMA 615
Query: 131 YNYCFSTCL 139
+N C++T L
Sbjct: 616 HNLCYTTLL 624
>gi|84043446|ref|XP_951513.1| DNA polymerase delta catalytic subunit [Trypanosoma brucei TREU927]
gi|33348312|gb|AAQ15638.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|62359086|gb|AAX79533.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei]
gi|261326367|emb|CBH09326.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1026
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 41/333 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLN------QELSRITE 407
E+E+ + V++ DPD L GY I + YLL RG L +N + Q R
Sbjct: 295 TEEEMLVQWARFVKRIDPDFLTGYNICNFDFPYLLSRGITLKVNDSFFYWGRQLNERTVH 354
Query: 408 VEKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
EK+ SR ++ N T+L M GR+V+++ +++ + L++Y+ + H L E+
Sbjct: 355 REKKFLSR-QLGNREYTELTMEGRVVMDVMAVIQRDYKLRAYSLNAVSQHFLGEQKEDVH 413
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+++ E R L + + YL ++L+E+L + EMAR+ G+
Sbjct: 414 HSIISDLQQGNDETRRRLAVYCLKDAYLP-----VKLLERLMVVVNNVEMARVTGVPIGW 468
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L RG Q +V S++LR +R NFV P+++ + ++EP+ Y +PI+ L
Sbjct: 469 LLERGQQIKVFSMLLRKARARNFVV--PTVETTGAEQRRYEGATVIEPKKGHYIEPIVTL 526
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+IIA+N C+ST L E +N +K+ +P+
Sbjct: 527 DFASLYPSIIIAHNLCYSTLLPGHE--------------VNNYESGMKE------DTPTE 566
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F+ K + G+LP++L+++L R + MK+
Sbjct: 567 HKFIRKEVFPGVLPEVLRDLLAARRQARALMKD 599
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI+ LDF SLYPS+IIA+N C+ST L
Sbjct: 519 YIEPIVTLDFASLYPSIIIAHNLCYSTLL 547
>gi|118400060|ref|XP_001032353.1| DNA polymerase family B containing protein [Tetrahymena
thermophila]
gi|89286694|gb|EAR84690.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1124
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 164/341 (48%), Gaps = 40/341 (11%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN---------LNQELSRITEVEKRN 412
F++NV DPDI +GY I + Y+LERG L +N + ++RI + + +
Sbjct: 375 FLQNV---DPDIFLGYNITNFDFPYILERGKQLKINNGKYGFMGRIKNTITRIKDGKYLS 431
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW 472
+ ++ GRI +++ + E L SY+ ++ YH L+E+ ++
Sbjct: 432 KAMGMRDTKEMNFEGRIQLDMMMHMHRETKLSSYSLNSVSYHFLNEQKEDVHHTQISGLQ 491
Query: 473 EHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ K + V Y ++ + ++L+++L I +EMAR+ G+ + +RG Q +V
Sbjct: 492 KGDAETRKRLAV--YCLKDAQLPLKLMQKLMCIYNYTEMARVTGVPINFLFTRGQQIKVA 549
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S + R ++L N P+ + + E +L+P+ Y PI LDF SLYPS+++
Sbjct: 550 SQLYRRTKLLNLYI--PTERSQGQGDKFEG-AFVLQPKKGFYDKPIATLDFASLYPSIMM 606
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
A+N C+ST + + NV++ S+ K + T++P G F +R G
Sbjct: 607 AHNLCYSTLISK-----------------NVAM-SMNK--DDYTLTPHGDYFAKPHVRQG 646
Query: 652 ILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
ILP +L+++L R K + K ++ LR + L +
Sbjct: 647 ILPDILKDLLAARKKAKNELA--KETDPLRKAVLDGRQLAL 685
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 91 STRSSFDSDMFPSS---SSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
+ RS D F + + Y PI LDF SLYPS+++A+N C+ST + +
Sbjct: 565 TERSQGQGDKFEGAFVLQPKKGFYDKPIATLDFASLYPSIMMAHNLCYSTLISK 618
>gi|324120742|dbj|BAJ78762.1| DNA polymerase delta catalytic subunit [Uroleucon
nigrotuberculatum]
Length = 1093
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 33/337 (9%)
Query: 346 LLERHFVSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
++ +S EKE + + VR+ DPDI+ GY I YLL R L L
Sbjct: 351 IVGSQVISCEKENTMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNFLG 410
Query: 404 RITEVEK-------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
RI +++ ++ +N + + GR+ +L+ +L + L+SY+ ++ YH L
Sbjct: 411 RIKDIQSVIREQVLQSKQMGRRENKSVNIDGRVPFDLYLVLVRDYKLRSYSLNSVSYHFL 470
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFG 515
E+ ++T + + V Y ++ + ++L+++L + EMAR+ G
Sbjct: 471 QEQKEDVHHSIITDLQNGTPQTRRRLAV--YCLKDAFLPLKLLDKLMCLINYMEMARVTG 528
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+ G Q +V S +LRL++ N++ P++ E +I EP Y D
Sbjct: 529 VPLGSLLTGGQQAKVVSQLLRLAQEKNYIM--PTMAGGMQDEQFEGATVI-EPIKGYYAD 585
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++A+N C++T L + +I L + + T
Sbjct: 586 PIATLDFTSLYPSIMMAHNLCYTTLLSQ------------------KTINLLNLSENDYT 627
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+PSG F+ SIR G+LP++L+ +L R K +K
Sbjct: 628 KTPSGSYFLSNSIRKGLLPEILENLLSARKKAKTDLK 664
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y DPI LDF SLYPS+++A+N C++T L +
Sbjct: 583 YADPIATLDFTSLYPSIMMAHNLCYTTLLSQ 613
>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
Length = 1092
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 178/398 (44%), Gaps = 56/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P+ M E+E F + + + P +IG ++
Sbjct: 305 GRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAP--IIGSQVLCHD------ 356
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E ++ + VR+ DPDIL GY I + YLL R L + + L RI +
Sbjct: 357 -----KETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGRIKNI 411
Query: 409 ---------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 412 RSVIKEQMLQSKQMGRRE--NQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQ 469
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L I EMAR+ G
Sbjct: 470 KEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVTG 524
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG Q +V S +LR ++ F+ PS + E +I EP+ Y D
Sbjct: 525 VPLESLLTRGQQIKVLSQLLRKAKTKGFIM--PSYTSQGSDEQYEGATVI-EPKRGYYAD 581
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-L 634
PI LDF SLYPS+++A+N C++T + LG + +R + LQ + +
Sbjct: 582 PISTLDFASLYPSIMMAHNLCYTTLV-----LGGTRE----------KLRQQENLQDDQV 626
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV +R G+LP++L+ +L R K +K
Sbjct: 627 ERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTT 605
>gi|294660060|ref|XP_002770696.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
gi|199434442|emb|CAR66020.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
Length = 1080
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 41/333 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+ E+E+ + E + + D D++IGY YLL+R LGL SR+ V +
Sbjct: 350 TTEEEMLMHWKEFIVKVDADVIIGYNTANFDIPYLLDRARALGLKSFPYFSRLNNV--KQ 407
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-- 461
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 408 EVKDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDV 467
Query: 462 LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
HS L E R L + + YL +RL+++L + +EMAR+ G+ F
Sbjct: 468 HHSIISDLQNGTKETRRRLAVYCLKDSYLP-----LRLLDKLMCLVNYTEMARVTGVPFS 522
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S + R +N V P++K E +I EP Y PI
Sbjct: 523 YLLSRGQQIKVISQLFRKCLEDNIVI--PNMKSEGSNEEYEGATVI-EPIRGYYDVPIAT 579
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T L + +I++ + + T++P+
Sbjct: 580 LDFSSLYPSIMMAHNLCYTTLLNK------------------QTIKNFNLTEDDYTLTPN 621
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G FV + GILP +L E+L R K +K
Sbjct: 622 GDYFVKDHKKKGILPTILDELLTARKKAKSDLK 654
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 573 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNK 603
>gi|328720536|ref|XP_001948892.2| PREDICTED: DNA polymerase delta catalytic subunit-like
[Acyrthosiphon pisum]
Length = 1093
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 33/333 (9%)
Query: 350 HFVSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
+S EKE + + VR+ DPDI+ GY I YLL R L L RI +
Sbjct: 355 QVISCEKENTMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNFLGRIKD 414
Query: 408 VEK-------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
++ ++ +N + + GR+ +L+ +L + L+SY+ ++ YH L E+
Sbjct: 415 IQSVIREQVLQSKQMGRRENKSVNIDGRVPFDLYLVLVRDYKLRSYSLNSVSYHFLQEQK 474
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
++T + + V Y ++ + ++L+++L + EMAR+ G+
Sbjct: 475 EDVHHSIITDLQNGTPQTRRRLAV--YCLKDAFLPLKLLDKLMCLINYMEMARVTGVPLG 532
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+ G Q +V S +LRL++ N++ P++ E +I EP Y DPI
Sbjct: 533 SLLTGGQQAKVVSQLLRLAQEKNYIM--PTMAGGMQDEQFEGATVI-EPIKGYYADPIAT 589
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T L + +I L + + T +PS
Sbjct: 590 LDFTSLYPSIMMAHNLCYTTLLSQ------------------KTINLLNLSENDYTKTPS 631
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G F+ SIR G+LP++L+ +L R K +K
Sbjct: 632 GSYFLSNSIRKGLLPEILENLLSARKKAKTDLK 664
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y DPI LDF SLYPS+++A+N C++T L +
Sbjct: 583 YADPIATLDFTSLYPSIMMAHNLCYTTLLSQ 613
>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
Length = 1082
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 43/335 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E E+ + + + R+ DPDI+ GY I W YL+ R L ++ L RI + R+
Sbjct: 354 SESEMLARWADFFRELDPDIITGYNISNFDWPYLINRAKHLKVDKFDFLGRIRNI--RSV 411
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPLH 463
+D V +N + GR+ +L +L + L+SYT + YH L E + +H
Sbjct: 412 IKDSVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVH 471
Query: 464 SWKLLTCWWEH---RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+ E+ R L + + YL ++L+ +L I + EMAR+ G+
Sbjct: 472 HSIISDLQNENEQTRRRLAMYCLKDAYLP-----LKLLNKLMCIINSMEMARVTGVPLVC 526
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+ +RG Q +V S +LR ++ ++ P+ + E +I EP+ Y DPI L
Sbjct: 527 LQTRGQQIKVVSQLLRKAKEAGYLI--PAYHGQGSDDQFEGATVI-EPKRGYYADPISTL 583
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T + P DLN ++TI+P+
Sbjct: 584 DFASLYPSIMMAHNLCYTTLVP-----------PNMQKDLN---------SDDITITPTK 623
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV +IR G+LP++L+ +L R K +K+ K
Sbjct: 624 NMFVKSNIRKGLLPEILESLLAARKKAKADLKDEK 658
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 576 YADPISTLDFASLYPSIMMAHNLCYTT 602
>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
Length = 1059
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 183/395 (46%), Gaps = 47/395 (11%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V FI NV D ++G ++ F
Sbjct: 274 GRKGIFPEPSVDPVIQIASVVQIHGQKKPFIRNVFTLDTCAPIVGSQVLCFD-------- 325
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E EL + + +R+ DPD++IGY + YLL+R LG+N L RI+ V+
Sbjct: 326 ---DESELLKKWSDFIREVDPDMIIGYNTTNFDFPYLLDRAQHLGVNKFPFLGRISGVKT 382
Query: 411 -------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++ + + +N + + GR+ +++ + ++ + L+SYT ++ L E+
Sbjct: 383 EAKDTKFQSKAFGQRENKSINLEGRLQLDMLQAIQRDYKLRSYTLNSVSAEFLGEQKEDV 442
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + + V Y ++ + +RL+++L + +EMAR+ GI F +L
Sbjct: 443 HHSIITELQKGNPETRRRLAV--YCLKDAFLPLRLMDKLMLLFNYTEMARVTGIPFNYIL 500
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
RG Q +V S + R + + V P IK M P +++PE Y PI LDF
Sbjct: 501 VRGQQIKVVSQLYRRALEQDLVI--PVIKSEI-MDEPYEGATVIDPEKGYYDVPITTLDF 557
Query: 583 QSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS++ A+N C++T L + LG+ + ++P+
Sbjct: 558 TSLYPSIMQAHNLCYTTLLKPEVAQRLGLVKGVDY-------------------EVTPNN 598
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV + R G+LP++L ++L R K +K+ K
Sbjct: 599 DLFVKATRRKGLLPEILSDLLSARKRAKNDLKKEK 633
>gi|429965585|gb|ELA47582.1| DNA polymerase (pol2) [Vavraia culicis 'floridensis']
Length = 1168
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 136/262 (51%), Gaps = 31/262 (11%)
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
N++R E+ N GRIV+++ +++ E L+SYT N+ H L + + L+
Sbjct: 423 NNTRKEMFN---DFHGRIVVDMLTVIKKEHKLRSYTLNNVSVHFLGMQKEDLPYYLIKGL 479
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLI-EQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
++ + + V Y ++ T + LI E+L EM R+ G+ + +RG ++
Sbjct: 480 FDGDDKTRRRIAV--YCLKDTLLPLLIYEKLLIFITGVEMVRVLGVPIHWHFNRGISVKI 537
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
++LR +R N FV + ++K +M A ++EPE Y +PI VLDF SLYPS+I
Sbjct: 538 FGLILREARKNGFVIPNVTVKDEGYMGA-----FVIEPERGYYDEPIAVLDFASLYPSII 592
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
IA+N C+ST L +H G+ S ++ ISP+G FV K +R
Sbjct: 593 IAHNLCYSTMLLGTKH-GIDKS-------------------KDAEISPTGTYFVKKDVRV 632
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G+LP +L+++L R VK+ MK
Sbjct: 633 GLLPVILEKMLKKRKEVKEQMK 654
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
Y +PI VLDF SLYPS+IIA+N C+ST L +H G+ S
Sbjct: 575 YDEPIAVLDFASLYPSIIIAHNLCYSTMLLGTKH-GIDKS 613
>gi|390339587|ref|XP_003725042.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Strongylocentrotus purpuratus]
Length = 1696
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 177/398 (44%), Gaps = 61/398 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ M E++ F I + P ++G ++ +F
Sbjct: 915 GRKGIFPEAEKDPVIQIANMVIRQGERDPFIRNIFTLNTCAP--IVGSQVMSFK------ 966
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQE 401
E E+ + + VR+ DPDIL GY I+ YL+ R L L+ L
Sbjct: 967 -----TEHEMLQAWADFVREIDPDILTGYNIQNFDIPYLINRAAALRLSRFPFLGRLKNT 1021
Query: 402 LSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
S I +V ++ + +N + M GR+ +L +++ + L+SY + YH L E+
Sbjct: 1022 KSVIRDVSFQSKQLGKRENKSVNMEGRVQFDLLQVVVRDYKLRSYRLNAVSYHFLQEQKE 1081
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + V Y ++ + +RL+++L + EMAR+ G+
Sbjct: 1082 DVQHSIITDLQNGNEQTRRRLAV--YCLKDAMLPLRLLDKLMSVINYMEMARVTGVPLTY 1139
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q +V S +LR ++ + V + ++ +L+P Y PI L
Sbjct: 1140 LLSRGQQIKVVSQLLRKAKEQDLVMPAHKVETGDDFVGG----YVLDPIRGYYDCPIATL 1195
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT----- 635
DF SLYPS++ A+N C++T L +++NL
Sbjct: 1196 DFSSLYPSIMQAHNLCYTTLLS-------------------------PSMKENLAPDQYI 1230
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV KSIR GILP++L+++L R K +K+
Sbjct: 1231 KTPTGNYFVKKSIRRGILPEILEDLLTARKRAKADLKK 1268
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS++ A+N C++T L
Sbjct: 1188 YDCPIATLDFSSLYPSIMQAHNLCYTTLL 1216
>gi|50543418|ref|XP_499875.1| YALI0A08426p [Yarrowia lipolytica]
gi|49645740|emb|CAG83802.1| YALI0A08426p [Yarrowia lipolytica CLIB122]
Length = 1072
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 43/335 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E ++ + + V + DPD++IGY + YL++R L L R+T ++ N
Sbjct: 339 SEGDMLMRWKQFVNEVDPDVIIGYNTTNFDFPYLIDRAKTLKLTDFPYFGRLTHIQ--NV 396
Query: 414 SRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
RD +++ L + GR ++L + ++ E L++YT + H L E+
Sbjct: 397 LRDSTFSSKAYGTRESKVLNIDGRTQLDLLQFIQREYKLRTYTLNAVSAHFLKEQKEDVH 456
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 457 HSIITDLQNGNADTRRRLAVYCLKDAYLPQ-----RLMDKLMCLINYTEMARVTGVPFSF 511
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q +V S + R + V P++KQ ++EPE Y PI L
Sbjct: 512 LLSRGQQIKVISQLFR--KALEVGMVIPNLKQDGSSEEQYEGATVIEPERGYYDIPIATL 569
Query: 581 DFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+++A+N C++T L + VE L + KL ++ +P
Sbjct: 570 DFSSLYPSIMMAHNLCYTTLLDKATVERLDL-------------------KLDEDYHRTP 610
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+G FV++ R GILP +L+E+L R K +K+
Sbjct: 611 NGDLFVNQKTRKGILPIVLEELLSARKKAKADLKK 645
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
+R Y D PI LDF SLYPS+++A+N C++T L +
Sbjct: 558 ERGYYDIPIATLDFSSLYPSIMMAHNLCYTTLLDKA 593
>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
Length = 1096
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 178/398 (44%), Gaps = 56/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P+ M E+E F + + + P +IG ++
Sbjct: 305 GRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAP--IIGSQVLCHD------ 356
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E ++ + VR+ DPDIL GY I + YL+ R L + + L RI +
Sbjct: 357 -----KETQMLDKWSAFVREVDPDILTGYNINNFDFPYLINRAAHLKVRNFEYLGRIKNI 411
Query: 409 ---------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 412 RSVIKEQMLQSKQMGRRE--NQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQ 469
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L I EMAR+ G
Sbjct: 470 KEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVTG 524
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG Q +V S +LR ++ F+ PS + E +I EP+ Y D
Sbjct: 525 VPLESLLTRGQQIKVLSQLLRKAKTKGFIM--PSYTSQGSDEQYEGATVI-EPKRGYYAD 581
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-L 634
PI LDF SLYPS+++A+N C++T + LG + +R + LQ + +
Sbjct: 582 PISTLDFASLYPSIMMAHNLCYTTLV-----LGGTRE----------KLRQQENLQDDQV 626
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV +R G+LP++L+ +L R K +K
Sbjct: 627 ERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTT 605
>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
Length = 1092
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 178/398 (44%), Gaps = 56/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P+ M E+E F + + + P +IG ++
Sbjct: 305 GRKGIFPEAKMDPVIQIANMVIRQGEREPFIRNVFTLNECAP--IIGSQVLCHD------ 356
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E ++ + VR+ DPDIL GY I + YL+ R L + + L RI +
Sbjct: 357 -----KETQMLDKWSAFVREVDPDILTGYNINNFDFPYLINRAAHLKVKNFEYLGRIKNI 411
Query: 409 ---------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 412 RSVIKEQMLQSKQMGRRE--NQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQ 469
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L I EMAR+ G
Sbjct: 470 KEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVTG 524
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG Q +V S +LR ++ F+ PS + E +I EP+ Y D
Sbjct: 525 VPLESLLTRGQQIKVLSQLLRKAKTKGFIM--PSYTSQGSDEQYEGATVI-EPKRGYYAD 581
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-L 634
PI LDF SLYPS+++A+N C++T + LG + +R + LQ + +
Sbjct: 582 PISTLDFASLYPSIMMAHNLCYTTLV-----LGGTRE----------KLREQENLQDDQV 626
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV +R G+LP++L+ +L R K +K
Sbjct: 627 ERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTT 605
>gi|448536009|ref|XP_003871049.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis Co
90-125]
gi|380355405|emb|CCG24924.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis]
Length = 1147
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 41/334 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + E V + DPD++IGY YLL+R L ++ R+ V +
Sbjct: 417 EEDMLFHWKEFVNEVDPDVIIGYNTANFDIPYLLDRARALKVHKFPYFGRLKGV--KQEI 474
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 475 KDAVFSSRAYGTRENKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQH 534
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++T E R L + + YL +RL+++L + +EMAR+ G+ F +
Sbjct: 535 SIITDLQNGNKETRRRLAVYCLKDAYLP-----LRLLDKLMCLVNYTEMARVTGVPFSYL 589
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
LSRG Q +V S + R + V P++K E +I EPE Y PI LD
Sbjct: 590 LSRGQQIKVVSQLFRKCLQEDIVI--PNMKSEGSSEEYEGATVI-EPERGYYDVPIATLD 646
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+++A+N C++T L + SIR+ + + T +P+G
Sbjct: 647 FSSLYPSIMMAHNLCYTTLLNK------------------NSIRAFGLTEADYTKTPNGD 688
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV + GILP +L E+L R K +K K
Sbjct: 689 YFVHPDKKKGILPTILNELLTARKKAKTDLKNEK 722
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDS 150
+R Y D PI LDF SLYPS+++A+N C++T L + + G++++
Sbjct: 634 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIRAFGLTEA 679
>gi|328865112|gb|EGG13498.1| DNA polymerase delta catalytic subunit [Dictyostelium fasciculatum]
Length = 1801
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 48/394 (12%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V N+ E FI+NV ++G + T
Sbjct: 1023 GRKGVFPEPGEDPVIQIANLVKNQGE-SEPFIKNVFTLKGCSNIVGAHVLTHP------- 1074
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---- 405
+EK L + + + + DPDI+IGY I YL+ER L + LSRI
Sbjct: 1075 ----DEKSLLREWRKFIIKVDPDIIIGYNIANFDLPYLIERSRALKIGDFSLLSRIKTTH 1130
Query: 406 TEVEKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
++++K S + + ++ MPGR +++ + ++ + L SY+ N+ H L E+
Sbjct: 1131 SKIKKATFSSQNLGTREGKEVSMPGRTQLDIIQAIQRDHKLSSYSLNNVSAHFLKEQKED 1190
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEV 521
+ ++ + + V Y I+ + ++L+++L + +EM+R+ G+ +
Sbjct: 1191 VHYSIIADLQNGTDDDRRRLAV--YCIKDAQLPLKLLDKLMILINYAEMSRVTGVPLSYL 1248
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L RG +V S + R + + + + K+ + + +++P+ Y +PI LD
Sbjct: 1249 LGRGEGIKVVSQLYRKAMEEDLLLPT---KRVSDVDVSFQGAYVIDPQVGFYDEPIATLD 1305
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+++A+N C++T L + V + + T++PSG
Sbjct: 1306 FTSLYPSIMMAHNLCYTTLLTAADKEKVDPN--------------------DYTLTPSGS 1345
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
AF+ S R GILPK+L+E+L R K +K K
Sbjct: 1346 AFIKPSHRKGILPKILEELLGARKKAKDDLKNEK 1379
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 1296 FYDEPIATLDFTSLYPSIMMAHNLCYTTLL 1325
>gi|149235442|ref|XP_001523599.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
gi|146452578|gb|EDK46834.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
Length = 1087
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 41/320 (12%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV------- 418
V + DPD++IGY I YLL+R LGL R+ V + +D V
Sbjct: 368 VNEVDPDVIIGYNIANFDIPYLLDRAKALGLKKFPYFGRLQFV--KQEVKDAVFSSRAYG 425
Query: 419 --KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT----CWW 472
+N + GR+ ++L + ++ E L+SYT ++ H L E+ ++T
Sbjct: 426 TRENKVANIDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQNGTK 485
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
E R L + + YL +RL+++L + +EMAR+ G+ F +LSRG Q +V S
Sbjct: 486 ETRRRLAVYCLKDAYLP-----LRLLDKLMCLVNYTEMARVTGVPFSYLLSRGQQIKVIS 540
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+ R V P++K E +I EPE Y PI LDF SLYPS+++A
Sbjct: 541 QLFRKCLQERIVI--PNMKSEGSNVEFEGATVI-EPERGYYDVPIATLDFSSLYPSIMMA 597
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
+N C++T + + +I S K +++ T +P+G FV + + GI
Sbjct: 598 HNLCYTTLISK------------------NTIESYKLTEEDYTKTPNGDYFVKPNKKQGI 639
Query: 653 LPKMLQEILDTRLMVKQSMK 672
LP +L E+L R K +K
Sbjct: 640 LPTILNELLTARKKAKTDLK 659
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
+R Y D PI LDF SLYPS+++A+N C++T + +
Sbjct: 574 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLISK 608
>gi|221054277|ref|XP_002261886.1| dna polymerase zeta catalytic subunit [Plasmodium knowlesi strain
H]
gi|193808346|emb|CAQ39050.1| dna polymerase zeta catalytic subunit, putative [Plasmodium
knowlesi strain H]
Length = 1929
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 53/300 (17%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H NEK+L IE + + P ++ YE + + GY+ +R L LN+ + I++V
Sbjct: 705 HIAENEKDLIKRLIEKINFYSPLSIVSYENDKYNVGYINQR--CLALNMGSFYAHISKVN 762
Query: 410 KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
+ + + G +V +L++L + + + +FEN+ H L+ +P S L+
Sbjct: 763 DQEEFTELNNAYNKNIKGILVESLYKLSK----VSNTSFENLCKHHLNVNLPSISRYTLS 818
Query: 470 CWWEH--------------------------------------RTHL---------YKWM 482
CW+ + H+ Y+ +
Sbjct: 819 CWYSYVGGQSPNDGRDARNTVVDGGVVGGVQGHVVGNGLIDVRNDHVIGGEPPYYPYRHL 878
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
TV +YL RV ++ + +++ ++ + + +++RGSQF ES +++L N
Sbjct: 879 TVRYYLKRVNLLLLIYDKIGYLKSKMNFCKYIHVDLLSLINRGSQFITESFLVKLCMRNG 938
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
F+ SPS K+ R +PL+L+P+S + P++V DFQSLYPS++IA+N C+STCLG
Sbjct: 939 FLMYSPSKKEIMEQRPILHVPLVLQPKSSINFFPLMVFDFQSLYPSILIAFNICYSTCLG 998
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLG 140
P++V DFQSLYPS++IA+N C+STCLG
Sbjct: 972 PLMVFDFQSLYPSILIAFNICYSTCLG 998
>gi|345483424|ref|XP_001602680.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1090
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 191/441 (43%), Gaps = 66/441 (14%)
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRTKPI 306
ISR L+ D A+DE ++ P E KV I G++ PE P+
Sbjct: 267 ISRCQLEVDVAWDE------FIAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPNKDPV 320
Query: 307 ----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
M + E E F I + P ++G ++ + + E + +
Sbjct: 321 IQIANMVILQGESEPFLRNIFTLDTCAP--IVGCQVLSHN-----------KESTMLEKW 367
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---------TEVEKRNS 413
+ +RQ DPDI GY I + YL+ R L + L RI T ++ +
Sbjct: 368 ADFIRQLDPDIFTGYNINNFDFPYLINRAQHLNVRDFSYLGRIKNIKSVIKNTVLQSKQM 427
Query: 414 SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
R E N + GR+ +L +L + L+SYT + YH L E+ ++T
Sbjct: 428 GRRE--NKSVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIITDLQN 485
Query: 474 HRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
+ + + V Y ++ + +RL+++L I EMAR+ G+ +L+RG Q +V S
Sbjct: 486 GDSQTRRRLAV--YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLSSLLTRGQQIKVVS 543
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+LR + ++ + Q ++EP+ Y DPI LDF SLYPS+I+A
Sbjct: 544 QLLRKTIERGYLI---PVHQGQGSDEQFEGATVIEPKRGYYNDPIATLDFSSLYPSIIMA 600
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
+N C++T L ++ + + ++T +P FV ++R GI
Sbjct: 601 HNICYTTLLSPAAQ------------------KAYEVPENDVTKTPVNSNFVKSNVRKGI 642
Query: 653 LPKMLQEILDTRLMVKQSMKE 673
LP++L+ +L R + K +K+
Sbjct: 643 LPEILESLLSARKVAKAELKK 663
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+I+A+N C++T L
Sbjct: 581 YNDPIATLDFSSLYPSIIMAHNICYTTLL 609
>gi|332687549|emb|CBZ41215.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687551|emb|CBZ41216.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687553|emb|CBZ41217.1| catalytic subunit of DNA polymerase delta [Saccharomyces bayanus]
Length = 1097
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQEL 402
+ E+E+ S + + + + DPD++IGY YLL R L + N+ QE+
Sbjct: 377 ATEEEMLSHWRDFIIKADPDVIIGYNTSNFDIPYLLNRAKALKVTDFPYFGRLKNVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLLEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T G VE L KL ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKGTVERLNF-------------------KLDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+++A+N C++T G VE L
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKGTVERL 636
>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
Length = 1094
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 157/332 (47%), Gaps = 31/332 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK-- 410
++EK L + E + + DPD L GY I Y+L RG L L + L RI V
Sbjct: 366 NDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTALNLKKLKFLGRIKNVASTV 425
Query: 411 RNSSRDEVK-----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++SS + ++ + GRI +++ L++ + L+SYT + + L E+ +
Sbjct: 426 KDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHY 485
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGII--RLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++ K + Y I+ G++ RLI++L FI EMAR+ G F +L+
Sbjct: 486 SIMNDLQNESPESRKRIAT--YCIK-DGVLPLRLIDKLLFIYNYVEMARVTGTPFVYLLT 542
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S + R + N+V PS + + +LEP Y +PI LDF
Sbjct: 543 RGQQIKVTSQLYRKCKELNYVI--PSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLDFA 600
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++IA+N C+ST I N + L+ + + F
Sbjct: 601 SLYPSIMIAHNLCYST-----------------LIKSNHEVSDLQNDDITTIQGKNNLKF 643
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
V K+++ GILP +++E+++ R VK +K K
Sbjct: 644 VKKNVKKGILPLIVEELIEARKKVKLLIKNEK 675
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS++IA+N C+ST +
Sbjct: 590 YIEPISTLDFASLYPSIMIAHNLCYSTLI 618
>gi|254577417|ref|XP_002494695.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
gi|238937584|emb|CAR25762.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
Length = 1090
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 186/396 (46%), Gaps = 55/396 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFS--WGYLLER 349
G+ PE T P IQ+ V + FI NV + ++T S G +
Sbjct: 319 GRPGIFPEPETDPVIQIANVMSVAGAKKPFIRNV----------FTVDTCSPITGSQIYS 368
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLN 399
H + E+E+ + + V DPDI+IGY + YL+ R L + N+
Sbjct: 369 H--ATEEEMLKHWRDFVVAADPDIIIGYNTSNFDFPYLINRAKALKVESFPYFGRLFNVK 426
Query: 400 QELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
QE++ K ++ E KN + + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 427 QEITSSVFSSKAYGTK-ESKN--INIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + + + V Y ++ + +RL+E+L + +EMAR+ G+ F
Sbjct: 484 KEDVHHSIITSLQKGDSETRRRLAV--YCLKDAYLPLRLMEKLMALVNYTEMARVTGVPF 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 542 SYLLSRGQQIKVISQLFR--KCLQIDTVIPNMQSQASDEQYEGATVI-EPIRGYYDIPIA 598
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE + KL ++ +
Sbjct: 599 TLDFSSLYPSIMMAHNLCYTTLTSKSTVEKFNM-------------------KLDEDYIM 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+G FV +R GILP +L+E++ R K+ +K
Sbjct: 640 TPNGDYFVTSKVRRGILPTILEELIGARKRAKKDLK 675
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T +
Sbjct: 593 YDIPIATLDFSSLYPSIMMAHNLCYTTLTSK 623
>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
Length = 1052
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 181/398 (45%), Gaps = 60/398 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ M EKE F + ++ P ++G ++ +F
Sbjct: 268 GRKGIFPEPDKDPVIQIANMVIRQGEKEPFIRNVFTLKACAP--IVGAQVLSFE------ 319
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
+E EL + E +R+ DPD++ GY I+ YLL R L + L RI ++
Sbjct: 320 -----SEAELLKKWAEFIREVDPDVITGYNIQNFDLPYLLNRAAHLKVKNFDYLGRIKDI 374
Query: 409 EK-------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ ++ + +N + M GR++ +L ++L + L+SYT + +H L E+
Sbjct: 375 KSTVKEAMVQSKQMGKRENKIINMEGRVIFDLLQVLLRDYKLRSYTLNAVSFHFLEEQKE 434
Query: 462 --LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
HS L + R L + + YL +RL+++L I EMAR+ G+
Sbjct: 435 DVHHSIISDLQNGSDQTRRRLAVYCLKDAYLP-----LRLLDKLMSIINYIEMARVTGVS 489
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+LSRG Q +V S +LR ++ + V ++ ++EP Y P+
Sbjct: 490 LGILLSRGQQIKVMSQLLRKAKTQDLVIPVYKVETGDEFTGAT----VIEPVRGYYDTPV 545
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCL---GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
LDF SLYPS+++A+N C++T + +E G+S S + +K
Sbjct: 546 ATLDFASLYPSIMMAHNLCYTTLITTPSSIEKEGLS------------SDQYIK------ 587
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV ++R G+LP++L+ +L R K +K
Sbjct: 588 --TPANSLFVKSTVRKGLLPEILESLLSARKKAKTELK 623
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL---GRVEHLGVS 148
Y P+ LDF SLYPS+++A+N C++T + +E G+S
Sbjct: 541 YDTPVATLDFASLYPSIMMAHNLCYTTLITTPSSIEKEGLS 581
>gi|83282608|ref|XP_729844.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii
17XNL]
gi|23488820|gb|EAA21409.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii]
Length = 1097
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 162/331 (48%), Gaps = 35/331 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE----V 408
++EK + + E V + DPD L GY I Y+L RG L L + + RI V
Sbjct: 369 NDEKTMLEAWNEFVIRIDPDFLTGYNIINFDIPYILNRGTALNLKKLKYIGRIKNIPSLV 428
Query: 409 EKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ N S + + ++ + GRI +++ L++ + L+SYT + + L E+ +
Sbjct: 429 KDANFSSKQFGTHETKEININGRIQFDVYDLIKRDYRLKSYTLNYVSFEFLKEQKEDVHY 488
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGII--RLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++ + K + Y I+ G++ RLI++L FI EMAR+ G F +L+
Sbjct: 489 SIMNDLQNENSESRKRIAT--YCIK-DGLLPLRLIDKLLFIYNYVEMARVTGTPFVYLLT 545
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S + R + N++ S IK + + + +LEP Y +PI LDF
Sbjct: 546 RGQQIKVTSQLYRKCKELNYIIPSTYIKVNNNDKFEGAT--VLEPIKGYYIEPISTLDFA 603
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP--SGV 641
SLYPS++IA+N C+ST + + + DLN + ++T P +
Sbjct: 604 SLYPSIMIAHNLCYSTLIKNNDEIS----------DLN---------KNDITTVPGKNNF 644
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +++ G+LP +++E++ R VK MK
Sbjct: 645 KFVKGNVKRGVLPLIVEELIRARKNVKAMMK 675
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS++IA+N C+ST +
Sbjct: 593 YIEPISTLDFASLYPSIMIAHNLCYSTLI 621
>gi|340502511|gb|EGR29193.1| hypothetical protein IMG5_161090 [Ichthyophthirius multifiliis]
Length = 1092
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 161/330 (48%), Gaps = 43/330 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN---------LNQELSRI 405
E E+F F+ DPDI +GY I + Y+ +R L +N + +S+I
Sbjct: 348 EWEIFMQFV------DPDIYLGYNIINFDFPYIFDRAKKLNVNKGKFGYMGRIKTTISKI 401
Query: 406 TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ + ++ + + ++ GRI ++++ ++ E L SY+ + YH L+E+
Sbjct: 402 KDGKFQSKAMGLRETKEINFEGRIQLDMFIHMQKEQKLSSYSLNTVSYHFLNEQKEDVHH 461
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ E + K + + Y ++ + + ++L+++L I +EMAR+ G+ + R
Sbjct: 462 TQISVLQEGNSETRKRLAI--YCLKDSQLPLKLMQKLMCIYNYTEMARVTGVPINYLFVR 519
Query: 525 GSQFRVESIMLRLSRL-NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
G Q +V S + R ++L F+ S Q +LEP+ Y+ PI LDF
Sbjct: 520 GQQIKVASQLYRKAKLCKMFIPTERSKGQGDKFEGA----FVLEPKRGFYSKPIATLDFA 575
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+++A+N C+ST + R D+ +LK + + T +P+G F
Sbjct: 576 SLYPSIMMAHNLCYSTLITR---------------DI-----TLKMNKDDYTATPNGDYF 615
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V IR GILP++L+E+L+ R K + +
Sbjct: 616 VKPHIRKGILPEILKELLNARKKAKNDLTQ 645
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
PT ++K F+ F R Y+ PI LDF SLYPS+++A+N C+ST + R
Sbjct: 541 PTERSKGQGDKFEG-AFVLEPKRG-FYSKPIATLDFASLYPSIMMAHNLCYSTLITR 595
>gi|324120720|dbj|BAJ78751.1| DNA polymerase delta catalytic subunit [Euborellia plebeja]
Length = 1078
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 179/389 (46%), Gaps = 42/389 (10%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V E+ + FI+NV + I + + FS+
Sbjct: 300 GRKGIFPEPEHDPVIQIASVVQEQGQRAPFIKNVLTLNTCAPI-LDAQVFSF-------- 350
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
+E EL + + VRQ DPDI+ GY I YLL R L + LSRI +
Sbjct: 351 -KSESELLDQWAKFVRQVDPDIITGYNINNFDMPYLLNRAKHLKVKNFSYLSRIKNICSV 409
Query: 412 NSSR-------DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
S+ + +N + + GR+ +++ +L E L+SYT + +H L E+
Sbjct: 410 VKSKMLQSKQMGQRENKFVNLEGRVAFDMYLVLIREHKLRSYTLNAVSFHFLQEQKEDVH 469
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + + + L +RL+++L EM+R+ G+ +L+R
Sbjct: 470 HSIISELQNGNEQTRRRLAI-YCLKDAILPMRLLDKLMAFINYMEMSRVTGVSLASLLTR 528
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR ++ F+ PS E +I EP Y PI LDF S
Sbjct: 529 GQQVKVVSQLLRHAKPRGFLM--PSHTSAGQDEQFEGATVI-EPRRGYYAKPIATLDFSS 585
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T + V+ R++ + Q +T +P+ FV
Sbjct: 586 LYPSIMMAHNLCYTTLVP-------------------VAKRNIVQPDQ-ITQTPANNFFV 625
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++R G+LP++L+ +L R K +K+
Sbjct: 626 KSTVRKGLLPEILESLLAARKQAKADLKK 654
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R KP P+ + F+ R Y PI LDF SLYPS+++A
Sbjct: 536 SQLLRHAKPRGFLMPSHTSAGQDEQFEGATV--IEPRRGYYAKPIATLDFSSLYPSIMMA 593
Query: 131 YNYCFST 137
+N C++T
Sbjct: 594 HNLCYTT 600
>gi|401626408|gb|EJS44355.1| cdc2p [Saccharomyces arboricola H-6]
Length = 1097
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 42/337 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSKWRDFIIKADPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKNVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+++A+N C++T + G + F KL ++ I+P
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNK----GTVERLDF-------------KLDEDYVITP 648
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+G FV R GILP +L E++ R K+ +++ K
Sbjct: 649 NGDFFVTAKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+++A+N C++T G VE L
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKGTVERL 636
>gi|147899700|ref|NP_001087694.1| DNA-directed DNA polymerase delta 1 [Xenopus laevis]
gi|51895814|gb|AAH81093.1| Pold protein [Xenopus laevis]
Length = 1109
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 207/466 (44%), Gaps = 63/466 (13%)
Query: 223 TGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE 282
G Y++ ++ +E S +++ +E+ IS A L PA E + I P+
Sbjct: 264 AGKYRVRKESQDEEPSKDNPSKVSLAQIEVD-ISWADLISHPAEGEWQKI-------APQ 315
Query: 283 EDRKVGIILIGQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDP-DILIGYE 337
I G++ PE P+ M EK+ FI NV ++G +
Sbjct: 316 RVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKD---PFIRNVFTLGTCASIVGSQ 372
Query: 338 IETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN 397
+ F ER E L + E VR DPDI+ GY I+ YL+ R L ++
Sbjct: 373 VLCF------ER-----EDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTLKVS 421
Query: 398 LNQELSRITEVEK--RNSS-----RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFEN 450
L RI ++ R+SS +N + GR+ +L ++L + L+SYT
Sbjct: 422 TFPFLGRIRSLKSVIRDSSFQSKQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYTLNA 481
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSE 509
+ +H L E+ ++T + + V Y ++ + +RL+E+L + E
Sbjct: 482 VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLEKLMCVINYME 539
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
MAR+ G+ +LSRG Q +V S +LR + + V P + R+ + ++EP
Sbjct: 540 MARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVM--PVV--RSEGGEDYTGATVIEPL 595
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSL 627
Y PI LDF SLYPS+++A+N C++T L G VE G++
Sbjct: 596 KGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGSVEKYGLN----------------- 638
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++ +P+G FV S+R G+LP++L+ +L R K +K+
Sbjct: 639 ---PEDFIKTPTGDCFVKASVRKGLLPEILENLLCARKRAKTELKK 681
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y PI LDF SLYPS+++A+N C++T L G VE G++
Sbjct: 599 YDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGSVEKYGLN 638
>gi|345564490|gb|EGX47452.1| hypothetical protein AOL_s00083g388 [Arthrobotrys oligospora ATCC
24927]
Length = 1099
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 42/336 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLG---------LNLNQELS 403
S E ++ + + +++ DPD++IGY I + YLLER L LN + +
Sbjct: 359 SREDQMLRAWTKFLQEVDPDVIIGYNIANFDFPYLLERAETLKVKDFPFWTRLNGTKSEA 418
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
R + + E K T GRI +++ +L++ + L+SYT ++ H L+E+
Sbjct: 419 RASTFSSKQMGNRESKTTNTN--GRIQLDVLQLVQRDYQLRSYTLNSVSAHFLNEQKEDV 476
Query: 464 SWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T + E R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 477 HHTMITELFNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCLINYAEMARVTGVPFN 531
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL---PLILEPESRLYTDP 576
+L+RG Q + S + R + + V P+ +Q+ E ++EP Y +P
Sbjct: 532 FLLARGQQVKFLSQLFRKAGEQSLVV--PNREQKVGGGGDEEQYEGATVIEPTRGFYKEP 589
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
+ LDF SLYPS+++A+N C++T L + EH+ D K ++ +
Sbjct: 590 VATLDFASLYPSIMMAHNLCYTT-LTKQEHM---DKMGM-------------KEGEDYHV 632
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+G FV+ S+R G+L + +++L R K +K
Sbjct: 633 TPTGDVFVNTSVRKGLLVTIFEDLLGARKRAKNDLK 668
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y +P+ LDF SLYPS+++A+N C++T L + EH+
Sbjct: 585 FYKEPVATLDFASLYPSIMMAHNLCYTT-LTKQEHM 619
>gi|312081845|ref|XP_003143198.1| DNA-directed DNA polymerase III [Loa loa]
gi|307761639|gb|EFO20873.1| DNA-directed DNA polymerase III [Loa loa]
Length = 1084
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 161/332 (48%), Gaps = 41/332 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN--------LNQELSRI 405
+E+EL + + E VR DPD++ GY I+ + Y++ER L + + LS++
Sbjct: 349 SEEELLNKWAEFVRIVDPDLITGYNIQNFDFPYIVERARALKIESRATMLGRIPSSLSKV 408
Query: 406 TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
E+ + N + GR+V ++++++ + L+SY+ ++ YH L E+ +
Sbjct: 409 REMPLSSKQMGNRTNKVTNIEGRVVFDVFQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDY 468
Query: 466 KLLTCWWEH----RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++ R L + + YL ++L+++L + EMAR+ G+ +
Sbjct: 469 AMIADLQNGNALTRRRLAIYCMKDAYLP-----LKLLQKLMSVINYIEMARVTGVPLDYL 523
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
LSRG Q +V S +LR ++ +F + Q + +++P Y PI LD
Sbjct: 524 LSRGQQVKVMSQILRKAKSMHFFLPVIDVVQPDDTYEGAT---VIDPIRGFYNTPIATLD 580
Query: 582 FQSLYPSVIIAYNYCFSTCLGR-VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
F SLYPS++IA+N C++T + R + +SDS + ++PS
Sbjct: 581 FASLYPSIMIAHNLCYTTLIRRPIASYNLSDS--------------------DFEVTPSN 620
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +IR G+LP++L+++L+ R K +K
Sbjct: 621 NRFVKPNIRHGLLPQVLEDLLNARKQAKNDLK 652
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR-VEHLGVSDS 150
Y PI LDF SLYPS++IA+N C++T + R + +SDS
Sbjct: 571 FYNTPIATLDFASLYPSIMIAHNLCYTTLIRRPIASYNLSDS 612
>gi|262176855|gb|ACY27482.1| DNA polymerase delta [Xenopus laevis]
Length = 1108
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 207/466 (44%), Gaps = 63/466 (13%)
Query: 223 TGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE 282
G Y++ ++ +E S +++ +E+ IS A L PA E + I P+
Sbjct: 263 AGKYRVRKESQDEEPSKDNPSKVSLAQIEVD-ISWADLISHPAEGEWQKI-------APQ 314
Query: 283 EDRKVGIILIGQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDP-DILIGYE 337
I G++ PE P+ M EK+ FI NV ++G +
Sbjct: 315 RVLSFDIECAGRKGVFPEPDKDPVIQIANMVLRQGEKD---PFIRNVFTLGTCASIVGSQ 371
Query: 338 IETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN 397
+ F ER E L + E VR DPDI+ GY I+ YL+ R L ++
Sbjct: 372 VLCF------ER-----EDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTLKVS 420
Query: 398 LNQELSRITEVEK--RNSS-----RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFEN 450
L RI ++ R+SS +N + GR+ +L ++L + L+SYT
Sbjct: 421 TFPFLGRIRSLKSVIRDSSFQSKQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYTLNA 480
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSE 509
+ +H L E+ ++T + + V Y ++ + +RL+E+L + E
Sbjct: 481 VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAYLPLRLLEKLMCVINYME 538
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
MAR+ G+ +LSRG Q +V S +LR + + V P + R+ + ++EP
Sbjct: 539 MARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVM--PVV--RSEGGEDYTGATVIEPL 594
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSL 627
Y PI LDF SLYPS+++A+N C++T L G VE G++
Sbjct: 595 KGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGSVEKYGLN----------------- 637
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++ +P+G FV S+R G+LP++L+ +L R K +K+
Sbjct: 638 ---PEDFIKTPTGDCFVKASVRKGLLPEILENLLCARKRAKTELKK 680
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y PI LDF SLYPS+++A+N C++T L G VE G++
Sbjct: 598 YDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGSVEKYGLN 637
>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
Length = 1093
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 154/331 (46%), Gaps = 38/331 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
++E E+ + + VR+ DPDI+ GY I YL+ R L + L RI ++ +
Sbjct: 365 NSENEMLKTWADFVREVDPDIITGYNINNFDIPYLINRAKHLKVKNFTYLGRIKNIQ--S 422
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+D+V +N + GR+ +L+ +L + L+SYT + YH L E+
Sbjct: 423 VIKDQVLQSKQMGRRENKHVNFEGRVPFDLYLVLVRDYKLRSYTLNAVSYHFLQEQKEDV 482
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + + V Y ++ + +RL+++L I EM+R+ G+ +L
Sbjct: 483 HHSIITDLQNGNSQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMSRVTGVSLACLL 540
Query: 523 SRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
+RG Q +V S +LR +R ++ V S Q ++EP Y+DPI LD
Sbjct: 541 TRGQQIKVVSQLLRKAREKGYLMPVYASGVQEEQFEGA----TVIEPRKGYYSDPITTLD 596
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+++A+N C++T +N L +P+
Sbjct: 597 FSSLYPSIMMAHNLCYTTL-------------------VNGPPDKLSLTPDQYIKTPASC 637
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP++L+ +L R K +K
Sbjct: 638 TFVKSSVRKGLLPEILESLLSARKKAKVDLK 668
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
R Y+DPI LDF SLYPS+++A+N C++T
Sbjct: 584 RKGYYSDPITTLDFSSLYPSIMMAHNLCYTT 614
>gi|440493562|gb|ELQ76017.1| DNA polymerase delta, catalytic subunit [Trachipleistophora
hominis]
Length = 1386
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 139/274 (50%), Gaps = 33/274 (12%)
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
NS+R E+ N GRIV+++ +++ E L+SYT N+ H L + + L+
Sbjct: 587 NSTRKEMFN---DYQGRIVVDMLTVIKKEHKLRSYTLNNVSVHFLGMQKEDLPYYLIRGL 643
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLI-EQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ + + V Y ++ T + LI E+L EM R+ G+ +RG ++
Sbjct: 644 FNGDDKTRRRIAV--YCLKDTLLPLLIYEKLLIFITGVEMVRVLGVPINWHFNRGISVKI 701
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
++LR +R NN+V S ++K +M A ++EPE Y +PI VLDF SLYPS+I
Sbjct: 702 FGLILREARKNNYVVPSVAVKDEGYMGA-----FVIEPERGYYDEPIAVLDFASLYPSII 756
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
IA+N C+ST L H ID N ++ SP+G FV + +R
Sbjct: 757 IAHNLCYSTMLLGTRH----------GIDKN----------KDAERSPTGSYFVKRDVRV 796
Query: 651 GILPKMLQEILDTRLMVKQSMKEYK--FSESLRN 682
GILP +L+++L R VK+ MK K F ++L N
Sbjct: 797 GILPVILEKMLKKRKEVKEKMKNEKNPFMKTLLN 830
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 9/55 (16%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSP 165
Y +PI VLDF SLYPS+IIA+N C+ST L H G ++++ +SP
Sbjct: 739 YDEPIAVLDFASLYPSIIIAHNLCYSTMLLGTRH---------GIDKNKDAERSP 784
>gi|213406475|ref|XP_002174009.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
gi|212002056|gb|EEB07716.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces
japonicus yFS275]
Length = 1067
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 182/399 (45%), Gaps = 59/399 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ + + S F+ NV + I T S +
Sbjct: 286 GRKGVFPEASIDPVIQIASIVTQYGDNSPFVRNV----------FCIGTCSQIVGTQVFE 335
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
+++E+ + + + +R+ DPD++IGY I + YL+ER VL + L R+T
Sbjct: 336 FEDQREMLAAWAKFIREVDPDVMIGYNICNFDFPYLIERAKVLNVPSFNYLGRLTNF--- 392
Query: 412 NSSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
R EVK T +PGR+ +++ ++++ + L+SY+ + L E
Sbjct: 393 ---RSEVKETSFSSKAYGTRDSKVTVIPGRLQLDMLQVMQRDYKLRSYSLNAVSAQFLKE 449
Query: 459 RIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ + ++T + R L + + +L + RL+++L +EMAR+
Sbjct: 450 QKEDVHYSIITDLQNGTPDSRRRLAIYCLKDAFLPQ-----RLMDKLMCFVNYTEMARVT 504
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ F +LSRG Q +V S + R + ++ V P+I+ E +I EP Y
Sbjct: 505 GVPFNFLLSRGQQVKVVSQLYRKALSHDLVI--PNIRVNGTDEQYEGATVI-EPVKGYYD 561
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
PI LDF SLYPS+++A+N C++T D R K ++
Sbjct: 562 TPIATLDFSSLYPSIMMAHNLCYTT-----------------LTDPETMSRLNMKQDEDY 604
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
I+P+G FV +IR G+LP + +++L R K +K+
Sbjct: 605 IITPNGDYFVRSNIRKGLLPLIFEDLLGARKRAKADLKK 643
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 560 YDTPIATLDFSSLYPSIMMAHNLCYTT 586
>gi|395858290|ref|XP_003801504.1| PREDICTED: DNA polymerase delta catalytic subunit [Otolemur
garnettii]
Length = 1108
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 322 GRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAP--ILGAKVQSYE------ 373
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 374 -----KEEDLLQAWSNFIRNMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 428
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 429 --RSNIRDSSFQSKQMGRRESKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 486
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 487 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 544
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + V P +K + ++EP Y PI
Sbjct: 545 SYLLSRGQQVKVVSQLLRQAMREGLVM--PVVKSEGGEDYTGAT--VIEPLKGYYDVPIA 600
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 601 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 640
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 641 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 694
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 595 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 635
>gi|255731752|ref|XP_002550800.1| DNA polymerase delta catalytic subunit [Candida tropicalis
MYA-3404]
gi|240131809|gb|EER31368.1| DNA polymerase delta catalytic subunit [Candida tropicalis
MYA-3404]
Length = 1079
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 179/394 (45%), Gaps = 50/394 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE + P IQ+ V FI NV +G S ++
Sbjct: 295 GRKGIFPEAKHDPVIQIANVVQRSGESKPFIRNV------FTVG------SCSPIIGSQI 342
Query: 352 VSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
S+EKE + + E + + DPD++IGY Y+L R L L R+ V
Sbjct: 343 FSHEKEEDMLMHWKEFICEVDPDVIIGYNTANFDIPYVLRRAEALKLPKFPFFGRLKSV- 401
Query: 410 KRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+ +D V +N + + GR+ ++L + + E L+SYT ++ H L E+
Sbjct: 402 -KQEIKDSVFSSRAYGTRENKVVNIDGRMQLDLLQFINREYKLRSYTLNSVSAHFLGEQK 460
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
++T + + + V Y ++ + +RL+++L + +EMAR+ G+ F
Sbjct: 461 EDVQHSIITDLQNGNSETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFS 518
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S + R + V P+++ E +I EPE Y PI
Sbjct: 519 YLLSRGQQIKVISQLFRKCLQEDVVI--PNLRSEGTNEEYEGATVI-EPERGYYDVPIAT 575
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T L + SI++ + + T +P+
Sbjct: 576 LDFSSLYPSIMMAHNLCYTTLLNK------------------KSIQAYGLTEDDYTKTPN 617
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G FV S+R GILP +L E+L R K +K+
Sbjct: 618 GDYFVKSSLRQGILPTILNELLTARKKAKADLKK 651
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 DRLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
+R Y D PI LDF SLYPS+++A+N C++T L +
Sbjct: 565 ERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNK 599
>gi|395331770|gb|EJF64150.1| hypothetical protein DICSQDRAFT_81194 [Dichomitus squalens LYAD-421
SS1]
Length = 1083
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 59/399 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E FI NV + ++G ++ +F+
Sbjct: 298 GRKGIFPEPHIDPVIQIANMVTRQGE-SKPFIRNVFTLNSCAHIVGSQVLSFT------- 349
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQ 400
+E EL + E + + DPD++IGY I + YLL+R Y+ + Q
Sbjct: 350 ----DEAELLVRWREFIEEVDPDVIIGYNISNFDFPYLLDRARALKASKFPYLGRIANKQ 405
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+++ T + + + K T L GR+ I++ + ++ E L+SYT ++ H L E+
Sbjct: 406 TVTKDTHFSSKAFGQRDSKETVLD--GRLQIDILQYMQREYKLRSYTLNSVCAHFLGEQK 463
Query: 461 P--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS +L E R L + + YL + RL+++L +EMAR+ G+
Sbjct: 464 EDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYTEMARVTGV 518
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +L+RG +V S + R + + +V P++K E +I EP+ Y P
Sbjct: 519 PFNYLLARGQSIKVLSQLFRKANDDGYVV--PALKGEGSDEQYEGATVI-EPKKGYYDVP 575
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS+++A+N C++T L + V+ LG+ +R + +Q
Sbjct: 576 IATLDFSSLYPSIMMAHNLCYTTLLDKATVDRLGL--------------VRDVDYVQ--- 618
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV S R G+LP +L++++ R K +K+
Sbjct: 619 --TPNNDLFVKSSRRKGLLPTILEDLISARKRAKADLKK 655
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T L + V+ LG+
Sbjct: 572 YDVPIATLDFSSLYPSIMMAHNLCYTTLLDKATVDRLGL 610
>gi|448099944|ref|XP_004199250.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359380672|emb|CCE82913.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 41/317 (12%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV---------KN 420
DPDI+IGY I YL++R LGL+ R+ V + +D V +N
Sbjct: 366 DPDIIIGYNIANFDLPYLIDRAKALGLSDFPFFGRLPSV--KQEVKDTVFSSRAYGTREN 423
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRT 476
+ + GR+ ++L + ++ E L+SYT ++ + L E+ ++T E R
Sbjct: 424 KVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAYFLGEQKEDVQHSIITDLQNGNRETRR 483
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
L + + YL RL+E+L + +EMAR+ G+ F +L+RG Q +V S + R
Sbjct: 484 RLAVYCLKDAYLPS-----RLMEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFR 538
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
+N V P++K E +++EP Y PI LDF SLYPS+++A+N C
Sbjct: 539 KCLEDNIVI--PNMKSEGTNEDYEG-AIVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLC 595
Query: 597 FSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
++T L + +I +L + + T++P+G F+ R GILP +
Sbjct: 596 YTTLLNK------------------QTINALNLKEDDYTLTPNGDYFIRDHKRKGILPTI 637
Query: 657 LQEILDTRLMVKQSMKE 673
L+E+L R + +K+
Sbjct: 638 LKELLTARKKARADLKK 654
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 572 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNK 602
>gi|149757884|ref|XP_001493912.1| PREDICTED: DNA polymerase delta catalytic subunit [Equus caballus]
Length = 1107
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 180/397 (45%), Gaps = 57/397 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPD++ GY I+ YL+ R L ++ L R++ +
Sbjct: 373 -----REEELLQAWSAFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVSSFPFLGRVSGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + V P +K + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAMREGLVM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK 676
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
Length = 1092
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 177/398 (44%), Gaps = 56/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE + P+ M E+E F + + + P +IG ++
Sbjct: 305 GRKGIFPEAKIDPVIQIANMVIRQGEREPFIRNVFTLNECAP--IIGSQVLCHD------ 356
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E ++ + VR+ DPDIL GY I + YLL R L + + L RI +
Sbjct: 357 -----KETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGRIKNI 411
Query: 409 ---------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + R E N + GR+ +L +L + L+SYT + YH L E+
Sbjct: 412 RSVIKEQMLQSKQMGRRE--NQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQEQ 469
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R + + YL +RL+E+L I EMAR+ G
Sbjct: 470 KEDVHHSIITDLQNGDEQTRRRSAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVTG 524
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG Q +V S +LR ++ F+ PS + E +I EP+ Y D
Sbjct: 525 VPLESLLTRGQQIKVLSQLLRKAKTKGFIM--PSYTSQGSDEQYEGATVI-EPKRGYYAD 581
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-L 634
PI LDF SLYPS+++A+N C++T + LG + +R + LQ + +
Sbjct: 582 PISTLDFASLYPSIMMAHNLCYTTLV-----LGGTRE----------KLRQQENLQDDQV 626
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV +R G+LP++L+ +L R K +K
Sbjct: 627 ERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTT 605
>gi|431920730|gb|ELK18503.1| DNA polymerase delta catalytic subunit [Pteropus alecto]
Length = 1109
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 59/396 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPEQDPVIQICSLGLRWGEQEPFLRLALTLRSCAP--ILGAQVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPDI+ GY I+ YLL R +L + L R+ +
Sbjct: 373 -----REEELLQAWSTFIRTMDPDIITGYNIQNFDLPYLLSRAQILKVQGFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSTIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAMEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 SYLLARGQQVKVVSQLLRQAMREGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG++ D F IR
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQF----------IR---------- 639
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+P+G FV S+R G+LP++L+ +L R K +
Sbjct: 640 -TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAEL 674
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|255716712|ref|XP_002554637.1| KLTH0F09966p [Lachancea thermotolerans]
gi|238936020|emb|CAR24200.1| KLTH0F09966p [Lachancea thermotolerans CBS 6340]
Length = 1095
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 38/333 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
E E+ + + V + DPD++IGY YL++R L + N+ QE+
Sbjct: 377 ENEMLKHWRQFVVETDPDVIIGYNTANFDLPYLIDRARALKIEEFPYFGRLSNVKQEVKE 436
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
K +R + + + GR+ ++L++ ++ E L+SYT + H L E+
Sbjct: 437 SVFSSKAYGTR---TSKNINIDGRLQLDLFQFVQREYKLRSYTLNAVSAHFLGEQKEDVH 493
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ +++ + + + V Y ++ + +RL+E+L + +EMAR+ G+ F +LS
Sbjct: 494 YSIISSLQNGDSETRRRLAV--YCLKDAFLPLRLMEKLMALVNYTEMARVTGVPFSYLLS 551
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S + R + V P+++ + E +I EP Y PI LDF
Sbjct: 552 RGQQIKVVSQLFR--KCLQIDTVIPNMQSQGSDEQYEGATVI-EPIRGYYDLPIATLDFN 608
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGVA 642
SLYPS+++A+N C++T + ++ +LK K + I+P+G
Sbjct: 609 SLYPSIMMAHNLCYTTLASK------------------TTVETLKLKKDEEYIITPNGDY 650
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV +R GILP++L E+++ R K +K K
Sbjct: 651 FVTSKVRSGILPEILYELINARKRAKNDLKAEK 683
>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
Length = 1046
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 162/337 (48%), Gaps = 41/337 (12%)
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
E + E +L + +++ + DPD + GY I Y+++R L L R+
Sbjct: 307 EVYSFDKETDLLNAWVKFIHDVDPDFVTGYNINNFDLPYIIDRAKHLKQQKCSFLGRLKS 366
Query: 408 VE-----KRNSSRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
V K N S+ K + + M GR+ +++ +++ ++L+SYT N VL E+
Sbjct: 367 VPSTVKVKTNQSKAMGKRIEKSVNMQGRLAYDMFLVVKRTLSLRSYTLNNSALQVLGEQK 426
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
+ +T H + V Y I+ + +R++++L+ + E+AR+ G+
Sbjct: 427 EDVHFSQITGLQNGDQHTRHRLAV--YCIKDAMLPLRIMDRLNSLTNDMELARVSGVTIT 484
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL---PLILEPESRLYTDP 576
+L+RG Q +V + +L +R + + H++A E ++EP+ YT P
Sbjct: 485 TLLTRGEQVKVVTQLLSHARHAGY------LMPVHHVQASEEQYEGATVIEPKKDYYTLP 538
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS+++A+N C++T + ++ LG+ ++++
Sbjct: 539 IATLDFSSLYPSIMMAHNLCYTTLVQPYIIDKLGLK--------------------EEDI 578
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
T +P G FV S+RCG+LP++L+ +L R K +
Sbjct: 579 TKTPKGNYFVKSSVRCGLLPEILENLLKARKRAKNEL 615
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
YT PI LDF SLYPS+++A+N C++T
Sbjct: 535 YTLPIATLDFSSLYPSIMMAHNLCYTT 561
>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
Length = 1092
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 152/321 (47%), Gaps = 39/321 (12%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV------- 418
VR+ DPDIL GY I YL+ R L + + L RI + R+ +++V
Sbjct: 369 VREVDPDILTGYNINNFDIPYLINRAAHLKVKNFEYLGRIKNI--RSVIKEQVLQSKQMG 426
Query: 419 --KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW---- 472
+N + GR+ +L +L E L+SYT + YH L E+ ++T
Sbjct: 427 RRENQYVNFEGRVPFDLLFVLLREYKLRSYTLNAVSYHFLQEQKEDVHHSIITDLQNGDE 486
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
+ R L + + YL +RL+E+L I EMAR+ G+ +L+RG Q +V S
Sbjct: 487 QTRRRLAMYCLKDAYLP-----LRLLEKLMAIVNYMEMARVTGVSLECLLTRGQQIKVLS 541
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+LR ++ ++ PS + E +I EP+ Y DPI LDF SLYPS+++A
Sbjct: 542 QLLRKAKTKGYIM--PSYTPQGSDEQYEGATVI-EPKRGYYADPISTLDFASLYPSIMMA 598
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI-SPSGVAFVDKSIRCG 651
+N C++T + LG S +R LQ + +P+ FV +R G
Sbjct: 599 HNLCYTTLV-----LGGSRE----------KLREKDGLQDEQVVRTPANNYFVKSEVRRG 643
Query: 652 ILPKMLQEILDTRLMVKQSMK 672
+LP++L+ +L R K +K
Sbjct: 644 LLPEILESLLAARKRAKNDLK 664
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSF 151
Y DPI LDF SLYPS+++A+N C++T + G E L D
Sbjct: 579 YADPISTLDFASLYPSIMMAHNLCYTTLVLGGSREKLREKDGL 621
>gi|341904443|gb|EGT60276.1| hypothetical protein CAEBREN_32385 [Caenorhabditis brenneri]
Length = 1042
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 161/355 (45%), Gaps = 68/355 (19%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NEK L + E VR+ DPDI+ GY I Y+L+R VL L L R + +K +
Sbjct: 357 NEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR--QRDKGSI 414
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER----- 459
RD N + + GRI+ ++ +++ + L+SYT ++ Y L E+
Sbjct: 415 VRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVE 474
Query: 460 ---IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
IP L + R L ++ + YL +RL+++L I EMAR+ G+
Sbjct: 475 HNIIP----DLQRGDEQTRRRLAQYCLKDAYLP-----LRLLDKLMSIINYIEMARVTGV 525
Query: 517 QFYEVLSRGSQFRV----------------ESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+L++G Q +V S+MLR + NNF P I+ +
Sbjct: 526 PMNFLLTKGQQIKVFLNPDFSHHFVFALQILSMMLRRCKQNNFFL--PVIEANSGDGEGY 583
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
++EP Y +PI LDF SLYPS++IA+N C++T L + GV +
Sbjct: 584 EGATVIEPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKAPQ--GVEN--------- 632
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
++ +PSG F KS R G+LP++L++IL R K MK K
Sbjct: 633 -----------EDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMKNEK 676
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS++IA+N C++T L
Sbjct: 595 FYNEPIATLDFASLYPSIMIAHNLCYTTLL 624
>gi|308800812|ref|XP_003075187.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1|
dna pol (ISS) [Ostreococcus tauri]
gi|116061741|emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1|
dna pol (ISS), partial [Ostreococcus tauri]
Length = 1115
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 57/406 (14%)
Query: 287 VGIILIGQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDI---LIGYEIETFS 342
V I G++ P+ + P IQ+ + E+ I V W D ++G ++ +F
Sbjct: 321 VDIECAGRKGHFPDAKQDPVIQIATLVTEQGSDKPIIRAV--WTLDTCAPIVGADVLSFK 378
Query: 343 WGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL 402
+E+EL + +R DPD+LIGY I + YLL+R LG+
Sbjct: 379 -----------DERELLRNWGSFLRGCDPDLLIGYNIVNFDFPYLLDRAETLGVADFPYW 427
Query: 403 SRI--TEVEKRNS-----SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
R+ T+V R++ + ++ ++ GR+ ++ R ++ + L SY+ + H
Sbjct: 428 GRMIGTKVRMRDTVFSSKAYGTHESKEISCEGRVQFDMLRAIQRDYKLSSYSLNAVSAHF 487
Query: 456 LHERIPLHSW----KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
L E+ + +L E R L + + YL + RL+++L ++ EMA
Sbjct: 488 LGEQKEDVHYSAISELQNGTPETRRRLAVYCLKDAYLPQ-----RLLDKLMYMYNYIEMA 542
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----LILE 567
R+ G+ +L+RG +V S +LR +R N + + ++ +++A + +LE
Sbjct: 543 RVTGVPLNYLLTRGQSIKVMSQLLRKARQRNMLIPHMAKREGGNVQAEGGVAYEGATVLE 602
Query: 568 PESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSL 627
+S Y P+ LDF SLYPS+++A+N C+ST + + H+ VS P
Sbjct: 603 AKSGYYEVPVATLDFASLYPSIMMAHNLCYSTLVPK--HM-VSKLNP------------- 646
Query: 628 KKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+++ SP+G FV + GILP++L+E+L R K +K+
Sbjct: 647 ----EDVGTSPAGDTFVKANNVKGILPEILEELLGARKRAKADLKK 688
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
++ Y P+ LDF SLYPS+++A+N C+ST +
Sbjct: 603 AKSGYYEVPVATLDFASLYPSIMMAHNLCYSTLV 636
>gi|301764899|ref|XP_002917866.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1106
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPD++ GY I+ YL+ R L ++ L R++ +
Sbjct: 373 -----REEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHTFPFLGRVSGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 GYLLSRGQQVKVVSQLLRQAMREGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|407862999|gb|EKG07818.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1029
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 160/329 (48%), Gaps = 31/329 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E+E+ ++ V+ DPDI GY I + YLL RG L N ++++ T
Sbjct: 296 TEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWGRQINERTVP 355
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ ++ N T+L + GR+++++ +++ + L+SY+ + H L E+
Sbjct: 356 REKKFQSKQMGNREYTELTLEGRVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHH 415
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + + + V Y ++ + ++L+E+L + EMAR+ G+ +L R
Sbjct: 416 SIIADLQQGSEETRRRLAV--YCLKDALLPVKLLERLMVVVNNVEMARVTGVPIEWLLER 473
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S+MLR +++ + + + + ++EP Y PI+ LDF S
Sbjct: 474 GQQIKVFSMMLRKAKVKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVTLDFAS 533
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N C+ST + + + +P + L+ +P+G FV
Sbjct: 534 LYPSIIIAHNLCYSTLVRPSDIV----RYP----------------AEMLSRTPTGDTFV 573
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K + GILP++LQ++L R K MK+
Sbjct: 574 KKELFPGILPEVLQDLLAARKRAKSLMKD 602
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI+ LDF SLYPS+IIA+N C+ST
Sbjct: 521 FYNCPIVTLDFASLYPSIIIAHNLCYST 548
>gi|410084320|ref|XP_003959737.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
gi|372466329|emb|CCF60602.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
Length = 1132
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 42/335 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
E E+ S + + + + DPD++IGY YL+ R L + N+ QE+
Sbjct: 414 EAEMLSHWRDFIVEADPDVIIGYNTGNFDIPYLINRARALKIENFPYFGRLVNVKQEIKD 473
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 474 TVFSSKAYGTR-ESKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVH 530
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+ ++T E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 531 YSIITDLQHGDSETRRRLAVYCLKDAYLP-----LRLLEKLMALVNYTEMARVTGVPFSY 585
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S + R + V P+++ + E +I EP Y PI L
Sbjct: 586 LLARGQQIKVVSQLFR--KCIQIDTVIPNMQSQGSDEQYEGATVI-EPIRGYYDVPIATL 642
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T C V LKK ++ I+P+G
Sbjct: 643 DFNSLYPSIMMAHNLCYTTL----------------CNKATVERLKLKK-DKDYIITPNG 685
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV +R GILP +L+E++ R K+ +++ K
Sbjct: 686 DYFVSDKLRRGILPIILEELISARKRAKKDLRDEK 720
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 635 YDVPIATLDFNSLYPSIMMAHNLCYTT 661
>gi|302687116|ref|XP_003033238.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
gi|300106932|gb|EFI98335.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
Length = 1072
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 191/397 (48%), Gaps = 55/397 (13%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ N V+ + E F+ NV + ++G ++ ++
Sbjct: 286 GRQGIFPEAKVDPVIQIANMVTRQGE-GQPFVRNVFTLNTCAHIVGSQVLSYK------- 337
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQEL 402
NE+E+ + + V + DPD++IGY I + YL++R L L L +
Sbjct: 338 ----NEREMLMAWRDFVEEVDPDVVIGYNISNFDFPYLMDRAEALKLTEFPFLGRLKNKQ 393
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP- 461
+ + + + + + + + + GR+ +++ + ++ E L+SY+ ++ H L E+
Sbjct: 394 TVVKDTHFSSKAYGQRDSKETPLDGRLQLDILQFMQREHKLRSYSLNSVCAHFLGEQKED 453
Query: 462 -LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
HS +L E R L + + YL + RL+++L EMAR+ G+ F
Sbjct: 454 VHHSIITELQNGTDESRRRLAVYCLKDAYLPQ-----RLLDKLMCFVNYIEMARVTGVPF 508
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG +V S + R + +N++ P++K E +I EP+ Y PI
Sbjct: 509 NYLLARGQSIKVLSQLFRKANSDNYII--PALKGEGSDEQYEGATVI-EPKKGYYDAPIA 565
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + R +E LG+ ++ + +Q
Sbjct: 566 TLDFSSLYPSIMMAHNLCYTTLVDRSTIERLGL--------------VKDVDYIQ----- 606
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV + R G+LP +L++++ R K +K+
Sbjct: 607 TPNNDFFVKATKRKGLLPTVLEDLISARKRAKADLKK 643
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + R +E LG+
Sbjct: 560 YDAPIATLDFSSLYPSIMMAHNLCYTTLVDRSTIERLGL 598
>gi|365983526|ref|XP_003668596.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
gi|343767363|emb|CCD23353.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
Length = 1107
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 42/332 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
E+E+ S + + + + DPD++IGY YL+ R L + N+ QE+
Sbjct: 389 EEEMLSHWRQFILEADPDLIIGYNTTNFDLPYLINRAKALKVQDFPYFGRLKNVKQEIKD 448
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
K +R E KN + + GR+ ++L + + E L+SYT + H L E+
Sbjct: 449 AIFSSKAYGTR-ESKN--INIDGRLQLDLLQFAQREYKLRSYTLNAVSAHFLGEQKEDVH 505
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+ ++T E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 506 YSIITDLQNGDSETRRRLAVYCLKDAYLP-----LRLLEKLMALVNYTEMARVTGVPFSY 560
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S + R + V P++ +A E +I EP Y PI L
Sbjct: 561 LLARGQQIKVVSQLFR--KCIQIDTVIPNMSSQASDEQYEGATVI-EPIRGYYDVPIATL 617
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T C V LKK ++ + ISP+G
Sbjct: 618 DFNSLYPSIMMAHNLCYTTL----------------CNKATVERLKLKKDEEYI-ISPNG 660
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +R GILP +L E++ R K+ +K
Sbjct: 661 DYFVTDKVRRGILPIILDELIQARKRAKKDLK 692
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 610 YDVPIATLDFNSLYPSIMMAHNLCYTT 636
>gi|396082048|gb|AFN83661.1| DNA polymerase catalytic subunit delta [Encephalitozoon romaleae
SJ-2008]
Length = 959
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 169/339 (49%), Gaps = 47/339 (13%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
++ +EKEL + + + DPDI++GY I+ Y+L+RG VLG+N S +
Sbjct: 237 YWYDSEKELLESWKKYFMEIDPDIIVGYNIKGFDIPYILDRGEVLGIN---NFSILGRSR 293
Query: 410 KRNSSRD---------EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER- 459
K+ +RD + T++++ GR+++++ ++R + L+SY+ ++ H L E+
Sbjct: 294 KKAKTRDTTMSSNMFGSISTTEVEIDGRLIVDMMIVIRRDYKLRSYSLNSVSIHFLKEQK 353
Query: 460 --IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI 516
+P S L + + Y +R T + +RL L+ + +E++R+ G+
Sbjct: 354 EDVPPSSIGELQSKDKDTRR-----RIASYCLRDTVLPLRLFSTLNVLINYTELSRVTGV 408
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+RG+ ++ +++ R + +F+ P I ++ E ++EP+ Y P
Sbjct: 409 PIEYFFTRGTAIKIFALIYRTAAKEDFIV--PEIDPFESNKSFEG-GFVIEPKRGFYNKP 465
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
+ V+DF SLYPS++I+ N C++T L + ++ R L ++
Sbjct: 466 VSVMDFSSLYPSIMISNNLCYTTLLTKEQY------------------RVLGGIK----- 502
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+ F + G+LP++L ++LD+R +K+ +K+ K
Sbjct: 503 TPTDNYFCSAETKKGLLPRILIDLLDSRKRIKEELKKEK 541
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
Y P+ V+DF SLYPS++I+ N C++T L + ++
Sbjct: 461 FYNKPVSVMDFSSLYPSIMISNNLCYTTLLTKEQY 495
>gi|170574522|ref|XP_001892851.1| DNA polymerase delta catalytic subunit [Brugia malayi]
gi|158601393|gb|EDP38315.1| DNA polymerase delta catalytic subunit, putative [Brugia malayi]
Length = 1084
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 161/329 (48%), Gaps = 35/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN--------LNQELSRI 405
+E+EL + + E VR DPD++ GY I+ + Y++ER L + + LS++
Sbjct: 349 SEEELLNKWAEFVRTVDPDLITGYNIQNFDFPYIVERARALKIESRATMLGRIPNSLSKV 408
Query: 406 TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
E+ + N + GR+V ++ +++ + L+SY+ ++ YH L E+ +
Sbjct: 409 REMPLSSKQMGNRTNKITNVEGRVVFDVIQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDY 468
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + + + Y ++ + ++L+++L I EMAR+ G+ +LSR
Sbjct: 469 SMIADLQNGNAFTRRRLAI--YCMKDAYLPLKLLQKLMSIINYIEMARVTGVPLDYLLSR 526
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR ++ +F I Q + +++P Y PI LDF S
Sbjct: 527 GQQVKVMSQILRKAKSLHFFLPVIDIVQADDTYEGAT---VIDPIRGFYNTPIATLDFAS 583
Query: 585 LYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
LYPS++IA+N C++T + G +SDS ++ ++PS F
Sbjct: 584 LYPSIMIAHNLCYTTLIRGSNASHNLSDS--------------------DVEVTPSNNRF 623
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
V +IR G+LP++L+++L+ R K +K
Sbjct: 624 VKSNIRRGLLPQVLEDLLNARKQAKNDLK 652
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHLGVSDS 150
Y PI LDF SLYPS++IA+N C++T + G +SDS
Sbjct: 571 FYNTPIATLDFASLYPSIMIAHNLCYTTLIRGSNASHNLSDS 612
>gi|73946992|ref|XP_851285.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 1107
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPD++ GY I+ YL+ R L ++ L R++ +
Sbjct: 373 -----REEELLQAWSTFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHTFPFLGRVSGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 GYLLSRGQQVKVVSQLLRQAMREGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG++ +
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLT--------------------KDQFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG++ D F
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTKDQF 637
>gi|407396863|gb|EKF27570.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 1029
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 31/329 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E+E+ ++ V+ DPDI GY I + YLL RG L N ++++ T
Sbjct: 296 TEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWGRQINERTVP 355
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ ++ N T+L + GR+++++ +++ + L+SY+ + H L E+
Sbjct: 356 REKKFQSKQMGNREYTELTLEGRVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHH 415
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + + V Y ++ + ++L+++L I EMAR+ G+ +L R
Sbjct: 416 SIISDLQQGSEETRRRLAV--YCLKDALLPVKLLDRLMVIVNNVEMARVTGVPIEWLLER 473
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S+MLR ++ + + + + ++EP Y PI+ LDF S
Sbjct: 474 GQQIKVFSMMLRKAKAKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVTLDFAS 533
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N C+ST L R + +P + L+ +P+G FV
Sbjct: 534 LYPSIIIAHNLCYST-LVRPSDIA---RYP----------------AEMLSRTPTGDTFV 573
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K + GILP++LQ++L R K MK+
Sbjct: 574 KKELFPGILPEVLQDLLAARKRAKSLMKD 602
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI+ LDF SLYPS+IIA+N C+ST
Sbjct: 521 FYNCPIVTLDFASLYPSIIIAHNLCYST 548
>gi|332241130|ref|XP_003269738.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit, partial [Nomascus leucogenys]
Length = 1071
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 61/417 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
NE++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----NEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMLGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAMHEGLLM--PVVKSEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG++ D F IR
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQF----------IR---------- 639
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 -TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|440294351|gb|ELP87368.1| DNA polymerase zeta catalytic subunit, putative [Entamoeba invadens
IP1]
Length = 1288
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 26/256 (10%)
Query: 423 LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWM 482
L GR++++ W + + N + + I + LH +P S T
Sbjct: 720 LGSEGRVLLSFWYIYKKCGNYSMFDIQYIAHKELHVFLPQVS----------HTQFSPLA 769
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
V + I L+ + + R E A E + RG+Q+RVE + R+S +
Sbjct: 770 NVVTNFLLFHCSIYLVAKFGYFERLKEFATFHSCPLEEEIERGTQYRVECCLKRVSE--D 827
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
F SP+ + R +PL++EP + +P++VLDF S+YP+ +IAYN C+STCLG
Sbjct: 828 FELFSPTPEDLEGSRPTTCVPLVMEPVCGFHENPVVVLDFLSMYPTTMIAYNMCYSTCLG 887
Query: 603 RVE------HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
++ H+G PF + + +L L+ N+ ++ +GV FVD ++ G+LP M
Sbjct: 888 YLDDFDTHRHIG-----PFWS---DFARTTLSGLENNIHVAANGVIFVDAILQKGVLPLM 939
Query: 657 LQEILDTRLMVKQSMK 672
L+EIL TR VK +K
Sbjct: 940 LEEILSTRQHVKDELK 955
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
+ +P++VLDF S+YP+ +IAYN C+STCLG ++
Sbjct: 857 FHENPVVVLDFLSMYPTTMIAYNMCYSTCLGYLD 890
>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
Length = 1102
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 41/332 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NE ++ + +R+ DPDIL GY I + YL+ R L L RI + R+
Sbjct: 373 NEADMLEKWAAFIREVDPDILTGYNINNFDFPYLINRAKHLNCKNFTFLGRIKNI--RSV 430
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
R +V +N + GR+ +L +L + L+SYT ++ YH L E+
Sbjct: 431 IRQQVLQSKQMGKRENKHVNFEGRVPFDLLLVLLRDYKLRSYTLNSVSYHFLQEQKEDVH 490
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++T + + V Y ++ + +RL+++L I EM+R+ G+ +L+
Sbjct: 491 HTIITDLQNGDDQTRRRLAV--YCLKDAYLPLRLLDKLMCIINYMEMSRVTGVSLLSLLT 548
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S +LR ++ N+V + + + + ++EP Y PI LDF
Sbjct: 549 RGQQIKVVSQLLRKAKEKNYVMPTYGVGSQEDQYEGAT---VIEPIKGYYKVPIATLDFS 605
Query: 584 SLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS++IA+N C++T L E L ++ D F + +P+
Sbjct: 606 SLYPSIMIAHNLCYTTLLQGNARERLALTPDQF---------------------SRTPAN 644
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV S+R G+LP++L+++L+ R K +K
Sbjct: 645 YFFVKSSLRKGLLPEILEDLLNARKRAKLDLK 676
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS++IA+N C++T L
Sbjct: 595 YKVPIATLDFSSLYPSIMIAHNLCYTTLL 623
>gi|344233498|gb|EGV65370.1| DNA polymerase delta catalytic subunit [Candida tenuis ATCC 10573]
Length = 1060
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 41/332 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E E+F + E V + DPD++IGY YLL+R L L R+ ++ +
Sbjct: 331 EDEMFMHWKEFVLKVDPDVIIGYNTSNFDLPYLLDRARALHLPKFPYFGRMKQI--KQEV 388
Query: 415 RDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+D V +N + + GR+ ++L + ++ E L+SYT ++ L E+
Sbjct: 389 KDSVFSSRAYGTRENKVINIEGRMQLDLLQFVQREYKLRSYTLNSVSAEFLGEQKEDVHH 448
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++T E R L + + YL +RL+E+L + +EMAR+ G+ F +
Sbjct: 449 SIITDLQNGDAETRRRLAVYCLKDAYLP-----LRLVEKLMCLVNYTEMARVTGVPFSYL 503
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
LSRG Q +V S + R + V P++K E +I EP Y PI LD
Sbjct: 504 LSRGQQIKVISQLFRKCLEQDIVI--PNMKSEGTNEEYEGATVI-EPSRGYYDVPITTLD 560
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+++A+N C++T L + +I++ + + ++P+G
Sbjct: 561 FSSLYPSIMMAHNLCYTTLLNK------------------QTIKTFGLNEDDYILTPNGD 602
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV + R GILP +L E+L R K +K+
Sbjct: 603 YFVKDNKRQGILPTILNELLTARKKAKADLKK 634
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTD-PIIVLDFQSLYPSVII 129
S L R D P K++ T ++ S R Y D PI LDF SLYPS+++
Sbjct: 514 SQLFRKCLEQDIVIPNMKSEGTNEEYEGATVIEPS---RGYYDVPITTLDFSSLYPSIMM 570
Query: 130 AYNYCFSTCLGR 141
A+N C++T L +
Sbjct: 571 AHNLCYTTLLNK 582
>gi|324120710|dbj|BAJ78746.1| DNA polymerase delta catalytic subunit [Karoophasma biedouwense]
Length = 992
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 58/396 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ + ++ FI NV D S ++
Sbjct: 214 GRKGIFPEPNVDPVIQIANMVIQQGQQEPFIRNVFTLD------------SCAPIVGCQV 261
Query: 352 VSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV- 408
+S++KE + + + VR+ DPD+ GY I + YL+ R L + L RI +
Sbjct: 262 LSHDKETGMLEKWADFVREVDPDVFTGYNINNFDFTYLINRAKHLNVKNFTYLGRIKNIS 321
Query: 409 --------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+ + R E N + GR+ +L +L + L+SYT ++ +H L E+
Sbjct: 322 SVIKEQMLQSKQMGRRE--NKHINFEGRVSFDLLLVLLRDYKLRSYTLNSVSFHFLQEQK 379
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T +H T + + + L +RL+++L EMAR+ G+
Sbjct: 380 EDVPHNIITDL-QHGTDVTRRRLAVYCLKDAYLPLRLLDKLMCFINYMEMARVTGVPLSC 438
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYTDP 576
+L+RG Q +V S +LR ++ ++ A+ AP+ ++EP+ Y DP
Sbjct: 439 LLTRGQQIKVVSQLLRKAKDRGYLI-------PAYSGAPQDEQFEGATVIEPKKGYYADP 491
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS+++A+N C++T L + G DS T
Sbjct: 492 IATLDFSSLYPSIMMAHNLCYTTLLRQ----GAKDSL----------------TPDQYTK 531
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV S+R G+LP++L+ +L R K +K
Sbjct: 532 TPASNLFVKASVRKGLLPEILENLLAARKKAKADLK 567
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y DPI LDF SLYPS+++A+N C++T L + G DS
Sbjct: 488 YADPIATLDFSSLYPSIMMAHNLCYTTLLRQ----GAKDSL 524
>gi|190344317|gb|EDK35969.2| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC
6260]
Length = 1075
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV------- 418
+ + DPD++IGY YLL+R LGL R+ V R +D V
Sbjct: 358 IEESDPDVIIGYNTTNFDLPYLLDRANALGLKEFPYFGRLKSV--RQEVKDSVFSSRAYG 415
Query: 419 --KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHSW--KLLTCWW 472
+N + + GR+ ++L + ++ E L+SYT ++ H L E+ H+ L
Sbjct: 416 TRENKVVNIDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHTIISDLQNGTR 475
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
E R L + + YL +RL+E+L + +EMAR+ G+ F +L+RG Q +V S
Sbjct: 476 ETRRRLAVYCLKDAYLP-----MRLLEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVIS 530
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+ R + V P++K E +I EP Y PI LDF SLYPS+++A
Sbjct: 531 QLFRKCLQEDVVI--PNMKSEGTNEEYEGATVI-EPVRGYYDVPIATLDFSSLYPSIMMA 587
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
+N C++T L + SI + + + T++P+G FV + R GI
Sbjct: 588 HNLCYTTLLSK------------------NSIAAFNLSKDDYTLTPNGDYFVKEHKRKGI 629
Query: 653 LPKMLQEILDTRLMVKQSMK 672
LP +L E++ R K +K
Sbjct: 630 LPTILHELISARKKAKVDLK 649
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 568 YDVPIATLDFSSLYPSIMMAHNLCYTTLLSK 598
>gi|113931510|ref|NP_001039204.1| DNA-directed DNA polymerase delta 1 [Xenopus (Silurana) tropicalis]
gi|89268922|emb|CAJ83173.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[Xenopus (Silurana) tropicalis]
Length = 1109
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 36/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--RN 412
E L + + VR DPDI+ GY I+ YL+ R L + L RI ++ R+
Sbjct: 379 EDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINRAQTLKVPNFPFLGRIRSMKSVIRD 438
Query: 413 SS-----RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
SS +N + GR+ +L ++L + L+SYT + +H L E+ +
Sbjct: 439 SSFQSKQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSI 498
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+E+L + EMAR+ G+ +LSRG
Sbjct: 499 ITDLQNGNEQTRRRLAV--YCLKDAYLPLRLMEKLMCVINYMEMARVTGVPLSYLLSRGQ 556
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR + + V P +K + ++EP Y PI LDF SLY
Sbjct: 557 QIKVVSQLLRQAMKQDLVM--PVVKSEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLY 612
Query: 587 PSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+++A+N C++T L G ++ G+S ++ +P+G FV
Sbjct: 613 PSIMMAHNLCYTTLLQSGSIDKYGLS--------------------PEDFIKTPTGDCFV 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
SIR G+LP++L+ +L R K +K+
Sbjct: 653 KASIRKGLLPEILENLLCARKRAKAELKK 681
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y PI LDF SLYPS+++A+N C++T L G ++ G+S
Sbjct: 599 YDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGSIDKYGLS 638
>gi|50308039|ref|XP_454020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643155|emb|CAG99107.1| KLLA0E01607p [Kluyveromyces lactis]
Length = 1101
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 154/319 (48%), Gaps = 46/319 (14%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKRNSSRDEVK 419
DPD++IGY + YL++R LG+ N+ QE+ T K +R E K
Sbjct: 392 DPDVVIGYNTTNFDFPYLIDRAAALGVQSFPYFGRLSNVKQEVKSSTFSSKAYGTR-ESK 450
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHR 475
N + + GR+ ++L + ++ E L+SYT + H L E+ ++T E R
Sbjct: 451 N--INIDGRLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVHHSIITTLQNGDSETR 508
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
L + + YL +RL+E+L + +EM+R+ G+ F +L+RG Q +V S +
Sbjct: 509 RRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMSRVTGVPFMYLLARGQQIKVISQLF 563
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R + V P++ + E +I EP+ Y PI LDF SLYPS+++A+N
Sbjct: 564 R--KCLQIQTVIPNMSSQGSDEQYEGATVI-EPKRGYYDVPIATLDFSSLYPSIMMAHNL 620
Query: 596 CFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGIL 653
C++T R V+ L + KL ++ ++P+ FV +R G+L
Sbjct: 621 CYTTLCDRATVQRLNL-------------------KLDEDYIVTPNNDIFVTSKVRRGVL 661
Query: 654 PKMLQEILDTRLMVKQSMK 672
P++L+E++ R K +K
Sbjct: 662 PEILEELIGARKKAKFDLK 680
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T R
Sbjct: 598 YDVPIATLDFSSLYPSIMMAHNLCYTTLCDRA 629
>gi|181622|gb|AAA35768.1| DNA polymerase delta [Homo sapiens]
Length = 1107
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 243/567 (42%), Gaps = 87/567 (15%)
Query: 167 NKDSIHEAEITHPD------CSKSSQIDFNPDLFKSFIR-----KQLETPKRRICD-SYA 214
N+DS E+T P CS+ S ++ F+R +L P RR+ +
Sbjct: 173 NRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIR 232
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD---EVKA 271
+ + + Y+ +D E+ V+ + +E+ A AL + A E
Sbjct: 233 VAGLGTPSFAPYEANVDF--EIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADV 290
Query: 272 IFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKPI----QMNFVSNEKELF 318
++ + + PPE +++ + + G++ PE P+ + E E F
Sbjct: 291 LWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPF 350
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
+R P ++G +++++ E++L + +R DPD++ GY
Sbjct: 351 LRLALTLRPCAP--ILGAKVQSYE-----------KEEDLLQAWSTFIRIMDPDVITGYN 397
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEVKNTQLQMPGRI 429
I+ YL+ R L + L R+ + + + + R + K + M GR+
Sbjct: 398 IQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTKV--VSMVGRV 455
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
+++ ++L E L+SYT + +H L E+ ++T + + V Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAV--YCL 513
Query: 490 RVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
+ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +LR + + P
Sbjct: 514 KDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--P 571
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEH 606
+K + ++EP Y PI LDF SLYPS+++A+N C++T L G +
Sbjct: 572 VVKSEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQK 629
Query: 607 LGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
LG++ D F IR +P+G FV S+R G+LP++L+ +L R
Sbjct: 630 LGLTEDQF----------IR-----------TPTGDEFVKTSVRKGLLPQILENLLSARK 668
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLLI 692
K + K ++ LR + L +
Sbjct: 669 RAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|71412800|ref|XP_808567.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70872801|gb|EAN86716.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1029
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 159/329 (48%), Gaps = 31/329 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E+E+ ++ V+ DPDI GY I + YLL RG L N ++++ T
Sbjct: 296 TEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWGRQINERTVP 355
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ ++ N T+L + GR+++++ +++ + L+SY+ + H L E+
Sbjct: 356 REKKFQSKQMGNREYTELTLEGRVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHH 415
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + + + V Y ++ + ++L+E+L + EMAR+ G+ +L R
Sbjct: 416 SIIADLQQGSEETRRRLAV--YCLKDALLPVKLLERLMVVVNNVEMARVTGVPIEWLLER 473
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S+MLR ++ + + + + ++EP Y PI+ LDF S
Sbjct: 474 GQQIKVFSMMLRKAKAKDLLVPAVEYSGGGGDQRGYEGATVIEPLKGFYNCPIVTLDFAS 533
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N C+ST + + + +P + L+ +P+G FV
Sbjct: 534 LYPSIIIAHNLCYSTLVRPSDIV----RYP----------------AEMLSRTPTGDTFV 573
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K + GILP++LQ++L R K MK+
Sbjct: 574 KKELFPGILPEVLQDLLAARKRAKSLMKD 602
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI+ LDF SLYPS+IIA+N C+ST
Sbjct: 521 FYNCPIVTLDFASLYPSIIIAHNLCYST 548
>gi|146421489|ref|XP_001486690.1| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC
6260]
Length = 1075
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV------- 418
+ + DPD++IGY YLL+R LGL R+ V R +D V
Sbjct: 358 IEESDPDVIIGYNTTNFDLPYLLDRANALGLKEFPYFGRLKSV--RQEVKDSVFSSRAYG 415
Query: 419 --KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHSW--KLLTCWW 472
+N + + GR+ ++L + ++ E L+SYT ++ H L E+ H+ L
Sbjct: 416 TRENKVVNIDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDVQHTIISDLQNGTR 475
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
E R L + + YL +RL+E+L + +EMAR+ G+ F +L+RG Q +V S
Sbjct: 476 ETRRRLAVYCLKDAYLP-----MRLLEKLMCLVNYTEMARVTGVPFSYLLARGQQIKVIS 530
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+ R + V P++K E +I EP Y PI LDF SLYPS+++A
Sbjct: 531 QLFRKCLQEDVVI--PNMKSEGTNEEYEGATVI-EPVRGYYDVPIATLDFSSLYPSIMMA 587
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
+N C++T L + SI + + + T++P+G FV + R GI
Sbjct: 588 HNLCYTTLLSK------------------NSIAAFNLSKDDYTLTPNGDYFVKEHKRKGI 629
Query: 653 LPKMLQEILDTRLMVKQSMK 672
LP +L E++ R K +K
Sbjct: 630 LPTILHELISARKKAKVDLK 649
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 568 YDVPIATLDFSSLYPSIMMAHNLCYTTLLSK 598
>gi|296234423|ref|XP_002762441.1| PREDICTED: DNA polymerase delta catalytic subunit [Callithrix
jacchus]
Length = 1107
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 181/395 (45%), Gaps = 57/395 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + VR DPD++ GY I+ +L+ R L ++ L R+ +
Sbjct: 373 -----KEEDLLQAWATFVRIMDPDVITGYNIQNFDLPFLISRAQTLKVHTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR ++ + P + R+ + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAKQEGLLM--PVV--RSEGGEDYTGATVIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+P+G FV S+R G+LP++L+ +L R K +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAEL 674
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|156844887|ref|XP_001645504.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156116168|gb|EDO17646.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 1096
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 159/332 (47%), Gaps = 42/332 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
EKE+ S + E + + DPD++IGY YL++R L + N+ QE+
Sbjct: 378 EKEMLSKWREFIVKVDPDLIIGYNSANFDLPYLIDRAKALKIDNFPYFGRLFNVKQEVKE 437
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ K +R + + + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 438 SSFSSKAYGTR---TSKVVNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVH 494
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T E R L + + YL +RL+E L + +EM+R+ G+ F
Sbjct: 495 HSIITDLQNGDSETRRRLAVYCLKDAYLP-----LRLLENLMALVNYTEMSRVTGVPFSY 549
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q +V S + R + V P++ + + E +I EP Y PI L
Sbjct: 550 LLSRGQQIKVVSQLFR--KCIEIDTVIPNMASQGTDQQYEGATVI-EPIRGYYDIPIATL 606
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T C V +LKK ++ I+P+G
Sbjct: 607 DFNSLYPSIMMAHNLCYTTL----------------CNKETVQRLNLKK-DEDYIITPNG 649
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +R GILP +L+E++D R K+ +K
Sbjct: 650 DYFVSTKLRHGILPIILRELIDARKRAKKDLK 681
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 599 YDIPIATLDFNSLYPSIMMAHNLCYTT 625
>gi|156552223|ref|XP_001606357.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1086
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 193/441 (43%), Gaps = 66/441 (14%)
Query: 255 ISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRTKPI 306
I+R L+ D A+D+ ++ P E KV I G++ PE P+
Sbjct: 263 ITRCQLECDVAWDQ------FVAHAPEGEWSKVAPFRILSFDIECAGRKGIFPEPEHDPV 316
Query: 307 ----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
M + E E F I + P ++G ++ +F E + +
Sbjct: 317 IQIANMVILQGESEPFLRNIFTLDTCAP--IVGCQVLSFE-----------KESSMLEKW 363
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV---- 418
+ +RQ DPDI GY I + YL+ R L + L RI + R+ +++V
Sbjct: 364 ADFIRQLDPDIFTGYNINNFDFPYLINRAQHLHVRDFNYLGRIKNI--RSVIKNQVLQSK 421
Query: 419 -----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE 473
+N + GR+ +L +L + L+SYT + YH L E+ +++
Sbjct: 422 QMGRRENKFVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISDLQN 481
Query: 474 HRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
+ + V Y ++ + +RL+++L I EMAR+ G+ +L+RG Q +V S
Sbjct: 482 GNAQTRRRLAV--YCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLSSLLTRGQQIKVVS 539
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIA 592
+LR + ++ P + E +I EP Y DPI LDF SLYPS+I+A
Sbjct: 540 QLLRKTIERGYLI--PVHHGQGSDEQYEGATVI-EPLRGYYNDPIATLDFSSLYPSIIMA 596
Query: 593 YNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGI 652
+N C++T L P N+S ++T +P+ FV S+R GI
Sbjct: 597 HNICYTTLLS-----------PSAQNHYNLS-------NDDITRTPANSNFVKGSVRKGI 638
Query: 653 LPKMLQEILDTRLMVKQSMKE 673
LP++L+++L R K +K+
Sbjct: 639 LPEILEQLLSARKAAKADLKK 659
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+I+A+N C++T L
Sbjct: 577 YNDPIATLDFSSLYPSIIMAHNICYTTLL 605
>gi|367016721|ref|XP_003682859.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
gi|359750522|emb|CCE93648.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
Length = 1094
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 42/336 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQELS 403
+E+++ + + V DPD++IGY + YL++R L + + QE+
Sbjct: 375 SEEDMLKHWRDFVVAADPDVIIGYNTSNFDFPYLIDRAKALKIETFPYFGRLKFVKQEVK 434
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 435 EAIFSSKAYGTR-ESKNVNID--GRLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDV 491
Query: 464 SWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
+ ++T E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 492 HYSIITSLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPFS 546
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S + R + V P+++ + E +I EP Y PI
Sbjct: 547 YLLSRGQQIKVVSQLFR--KCMEIETVIPNMQSQGSDEQYEGATVI-EPIRGYYDIPIAT 603
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T C V LK+ +++ I+P+
Sbjct: 604 LDFNSLYPSIMMAHNLCYTTL----------------CNKATVDRMKLKQ-EEDYIITPN 646
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
G FV +R GILP +L E++ R K+ +K K
Sbjct: 647 GDYFVTSKLRRGILPIILDELISARKRAKKDLKNEK 682
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 597 YDIPIATLDFNSLYPSIMMAHNLCYTT 623
>gi|341875870|gb|EGT31805.1| hypothetical protein CAEBREN_32455 [Caenorhabditis brenneri]
Length = 1017
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 68/355 (19%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NEK L + E VR+ DPDI+ GY I Y+L+R VL L L R + +K +
Sbjct: 346 NEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR--QRDKGSI 403
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER----- 459
RD N + + GRI+ ++ +++ + L+SYT ++ Y L E+
Sbjct: 404 VRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVE 463
Query: 460 ---IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
IP L + R L ++ + YL +RL+++L I EMAR+ G+
Sbjct: 464 HNIIP----DLQRGDEQTRRRLAQYCLKDAYLP-----LRLLDKLMSIINYIEMARVTGV 514
Query: 517 QFYEVLSRGSQFRV----------------ESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+L++G Q +V S+MLR + NNF P I+ +
Sbjct: 515 PMNFLLTKGQQIKVFLNPDFSHHFVFALQILSMMLRRCKQNNFFL--PVIEANSGDGEGY 572
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
+++P Y +PI LDF SLYPS++IA+N C++T L + + D
Sbjct: 573 EGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKAPQGIENED--------- 623
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
IR +PSG F KS R G+LP++L++IL R K MK K
Sbjct: 624 --YIR-----------TPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMKNEK 665
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 94 SSFDSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+S D + + ++ D + Y +PI LDF SLYPS++IA+N C++T L
Sbjct: 565 NSGDGEGYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL 613
>gi|124802958|ref|XP_001347646.1| DNA polymerase zeta catalytic subunit, putative [Plasmodium
falciparum 3D7]
gi|23495229|gb|AAN35559.1|AE014834_56 DNA polymerase zeta catalytic subunit, putative [Plasmodium
falciparum 3D7]
Length = 2240
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 38/285 (13%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
V NE+EL I + + P ++ YE + + Y+ +R L L++ I ++ +
Sbjct: 851 VENERELIQKLINKILFYSPLSIVSYENDKYNINYINQR--CLALDIGNFYKMICKLNDQ 908
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D + G I+ +L++L N + +FEN+ H L+ IP + L W
Sbjct: 909 KKFLDLHNAYSRNIKGIIIESLYKL----SNTYNTSFENLCKHYLNINIPSINKYTLYYW 964
Query: 472 WEHRT-----------------------------HL---YKWMTVEHYLIRVTGIIRLIE 499
+ + T H+ Y+ +T++HYL +V I+ + +
Sbjct: 965 YNYNTKRKIKANGSSTVVNKDIINNDLWNDMDEEHIYFPYRHITIKHYLRKVYFILLIYD 1024
Query: 500 QLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAP 559
++ F+ R + + +++RGSQ+ +ES +L++S N+V SPS K+ R
Sbjct: 1025 KICFLKRKMNFCKYIHVDLLSLINRGSQYIIESFLLKMSIKYNYVLYSPSNKEIFDQRPI 1084
Query: 560 ESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 604
PLIL+P+S + P++V DFQSLYPS++IA+N C+STCLG +
Sbjct: 1085 LHTPLILQPKSSINFFPLLVFDFQSLYPSILIAFNICYSTCLGTI 1129
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 26/29 (89%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
P++V DFQSLYPS++IA+N C+STCLG +
Sbjct: 1101 PLLVFDFQSLYPSILIAFNICYSTCLGTI 1129
>gi|449681697|ref|XP_004209898.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Hydra
magnipapillata]
Length = 1082
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 181/396 (45%), Gaps = 59/396 (14%)
Query: 293 GQESELPE-VRTKPIQ---MNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLL 347
G++ PE + K IQ M EKE FI NV D ++G ++ T+
Sbjct: 299 GRKGIFPEPEKDKVIQIANMVIYQGEKE---PFIRNVFTLDTCAPIVGSQVLTYQ----- 350
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-- 405
NE +LF + + V + DPD++ GY I + YLL R VL + L RI
Sbjct: 351 ------NESDLFKAWSDFVNEVDPDMITGYNIVNFDFPYLLNRAKVLNVPSFSYLGRILS 404
Query: 406 -------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
T + R + E N + G + +L +L + L+SYT ++ YH L E
Sbjct: 405 EKTTISSTVFQSRAYGKRE--NKVINTTGVVQFDLLHILLRDYKLRSYTLNSVSYHFLKE 462
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQ 517
+ +++ + + V Y ++ + +RL+++L + EMAR+ G+
Sbjct: 463 QKEDVHHAIISDLQNGNEQTRRRLAV--YCMKDAILPLRLLDKLMCVINYMEMARVTGVP 520
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+L+RG Q +V S +LR S+ ++F+ + I+ +++P Y PI
Sbjct: 521 LSYLLTRGQQVKVVSQLLRKSKEHDFILPAQKIEAGDEYEGAT----VIDPIKGYYRKPI 576
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-LTI 636
LDF SLYPS+++A+N C++T L + + L+++ + +
Sbjct: 577 ATLDFASLYPSIMMAHNLCYTTLLSKCD---------------------LERMNPDEYIV 615
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P FV KS+R G+LP++L+ +L R K +K
Sbjct: 616 TPCNHYFVKKSVRKGLLPEILENLLSARKKAKSDLK 651
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS+++A+N C++T L + +
Sbjct: 572 YRKPIATLDFASLYPSIMMAHNLCYTTLLSKCD 604
>gi|163916151|gb|AAI57513.1| Unknown (protein for MGC:180510) [Xenopus (Silurana) tropicalis]
Length = 911
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 36/329 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--RN 412
E L + + VR DPDI+ GY I+ YL+ R L + L RI ++ R+
Sbjct: 379 EDALLKAWADFVRTIDPDIITGYNIQNFDMPYLINRAQTLKVPNFPFLGRIRSMKSVIRD 438
Query: 413 SS-----RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
SS +N + GR+ +L ++L + L+SYT + +H L E+ +
Sbjct: 439 SSFQSKQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQEQKEDVQHSI 498
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+T + + V Y ++ + +RL+E+L + EMAR+ G+ +LSRG
Sbjct: 499 ITDLQNGNEQTRRRLAV--YCLKDAYLPLRLMEKLMCVINYMEMARVTGVPLSYLLSRGQ 556
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q +V S +LR + + V P +K + ++EP Y PI LDF SLY
Sbjct: 557 QIKVVSQLLRQAMKQDLVM--PVVKSEGG--EDYTGATVIEPLKGYYDVPIATLDFSSLY 612
Query: 587 PSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+++A+N C++T L G ++ G+S ++ +P+G FV
Sbjct: 613 PSIMMAHNLCYTTLLQSGSIDKYGLS--------------------PEDFIKTPTGDCFV 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
SIR G+LP++L+ +L R K +K+
Sbjct: 653 KASIRKGLLPEILENLLCARKRAKTELKK 681
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS 148
Y PI LDF SLYPS+++A+N C++T L G ++ G+S
Sbjct: 599 YDVPIATLDFSSLYPSIMMAHNLCYTTLLQSGSIDKYGLS 638
>gi|71406868|ref|XP_805939.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70869536|gb|EAN84088.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 833
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 165/336 (49%), Gaps = 45/336 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E+E+ ++ V+ DPDI GY I + YLL RG L N ++++ T
Sbjct: 296 TEEEMLLEWVRFVKAIDPDIFTGYNISNFDFPYLLNRGAALKTNDAFHYWGRQINERTVP 355
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
++ ++ N T+L + GR+++++ +++ + L+SY+ + H L E+
Sbjct: 356 REKKFQSKQMGNREYTELTLEGRVILDVMVVIQRDYKLRSYSLNAVSQHFLGEQKEDVHH 415
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + + + V Y ++ + ++L+E+L + EMAR+ G+ +L R
Sbjct: 416 SIIADLQQGSEETRRRLAV--YCLKDALLPVKLLERLMVVVNNVEMARVTGVPIEWLLER 473
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIK-------QRAHMRAPESLPLILEPESRLYTDPI 577
G Q +V S+MLR ++ + + P+++ QR + A ++EP Y PI
Sbjct: 474 GQQIKVFSMMLRKAKAKDLLV--PAVEYSGGGGDQRGYEGAT-----VIEPLKGFYNCPI 526
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
+ LDF SLYPS+IIA+N C+ST + + + +P + L+ +
Sbjct: 527 VTLDFASLYPSIIIAHNLCYSTLVRPSDIV----RYP----------------AEMLSRT 566
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
P+G FV K + GILP++LQ++L R K MK+
Sbjct: 567 PTGDTFVKKELFPGILPEVLQDLLAARKRAKSLMKD 602
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI+ LDF SLYPS+IIA+N C+ST
Sbjct: 521 FYNCPIVTLDFASLYPSIIIAHNLCYST 548
>gi|207347015|gb|EDZ73334.1| YDL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1097
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASGDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|1199547|emb|CAA64911.1| CDC2 [Saccharomyces cerevisiae]
gi|1431142|emb|CAA98669.1| CDC2 [Saccharomyces cerevisiae]
Length = 1097
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|403213728|emb|CCK68230.1| hypothetical protein KNAG_0A05660 [Kazachstania naganishii CBS
8797]
Length = 1095
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 36/334 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
E+++ S + + + + DPD++IGY YL+ R L + N+ QE+
Sbjct: 377 EQQMLSHWRDFIVEVDPDVIIGYNTTNFDIPYLINRARALKVANFPYFGRLSNVKQEIKD 436
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
K +R + + + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 SVFSSKAYGTR---SSKNVNIDGRLQLDLLQFVQREYKLRSYTLNAVSAHFLGEQKEDVH 493
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++T ++ + + + V Y ++ + +RL+E+L + +EMAR+ G+ F +LS
Sbjct: 494 HSIITDLFKGDSETRRRLAV--YCLKDAYLPLRLLEKLMALVNYTEMARVTGVPFSYLLS 551
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V S + R + V P+++ +A E +I EP Y PI LDF
Sbjct: 552 RGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDEQYEGATVI-EPIRGYYDVPIATLDFN 608
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+++A+N C++T C V +LKK ++ I+P+G F
Sbjct: 609 SLYPSIMMAHNLCYTTL----------------CNKATVERMNLKK-DEDYIITPNGDYF 651
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFS 677
V +R GILP +L E++ R K+ +++ K S
Sbjct: 652 VTDKLRRGILPIILDELISARSRAKKDLRDEKDS 685
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T +
Sbjct: 598 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKA 629
>gi|323355835|gb|EGA87648.1| Pol3p [Saccharomyces cerevisiae VL3]
Length = 1097
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|259145143|emb|CAY78407.1| Pol3p [Saccharomyces cerevisiae EC1118]
Length = 1097
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|324120708|dbj|BAJ78745.1| DNA polymerase delta catalytic subunit [Galloisiana yuasai]
Length = 994
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 177/395 (44%), Gaps = 54/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + + FI NV D ++G ++ ++
Sbjct: 214 GRKGIFPEANHDPVIQIANMVVRQGDREPFIRNVFTLDTCAPIVGSQVLSYK-------- 265
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E + + VR+ DPDI GY I + YL++R L + L R+ +
Sbjct: 266 ---RESAMLKDWANFVREVDPDIFTGYNINNFDFPYLIDRSNHLKVQDFCFLGRVKNI-- 320
Query: 411 RNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
R+ +++V +N + + GR+ +L+ +L + L+SYT + +H L E+
Sbjct: 321 RSVIKNQVLQSKQMGKRENKSVNIEGRVPFDLFAVLIRDYKLRSYTLNAVSFHFLQEQKE 380
Query: 462 LHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
++T + R L + + YL +RL+++L I EMAR+ G+
Sbjct: 381 DVQHNIITDLQNGTPQTRRRLAVYCLKDAYLP-----LRLLDKLMCIINYMEMARVTGVS 435
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+L+RG Q +V S +LR ++ ++ P+ E +I EP+ Y DPI
Sbjct: 436 LSCLLTRGQQIKVVSQLLRKAKEKGYLI--PTHNGGVQEDQYEGATVI-EPKRGYYGDPI 492
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++A+N C++T L P D L Q T +
Sbjct: 493 ATLDFSSLYPSIMMAHNLCYTTLL------------PVSVKD------KLGLTQDQFTKT 534
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
PS FV S+R G+LP++L+ +L R K +K
Sbjct: 535 PSNNLFVKSSVRKGLLPEILESLLSARKKAKNDLK 569
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+++A+N C++T L
Sbjct: 488 YGDPIATLDFSSLYPSIMMAHNLCYTTLL 516
>gi|27806073|ref|NP_776852.1| DNA polymerase delta catalytic subunit [Bos taurus]
gi|118838|sp|P28339.1|DPOD1_BOVIN RecName: Full=DNA polymerase delta catalytic subunit
gi|162974|gb|AAA30493.1| DNA polymerase-delta catalytic-subunit [Bos taurus]
Length = 1106
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 63/400 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 320 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 371
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER------------GYVLGL 396
E++L + +R DPD++ GY I+ YL+ R G V+GL
Sbjct: 372 -----REEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPGFPLLGRVIGL 426
Query: 397 NLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
N R + + R + R + K + M GR+ +++ ++L E L+SYT + +H L
Sbjct: 427 RSN---IRESSFQSRQTGRRDSKV--VSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFL 481
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFG 515
E+ ++T + + V Y ++ + +RL+E+L + EMAR+ G
Sbjct: 482 GEQKEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTG 539
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG Q +V S +LR + + P +K + ++EP Y
Sbjct: 540 VPLGYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDV 595
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 596 PIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------Q 635
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 636 FIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAK 675
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 593 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 633
>gi|365766444|gb|EHN07940.1| Pol3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1097
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|256274101|gb|EEU09012.1| Pol3p [Saccharomyces cerevisiae JAY291]
Length = 1097
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|151941901|gb|EDN60257.1| DNA polymerase III catalytic (delta) subunit [Saccharomyces
cerevisiae YJM789]
Length = 1097
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|330443503|ref|NP_010181.2| Pol3p [Saccharomyces cerevisiae S288c]
gi|341940645|sp|P15436.4|DPOD_YEAST RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|4191|emb|CAA43922.1| DNA polymerase III catalytic subunit [Saccharomyces cerevisiae]
gi|329138870|tpg|DAA11758.2| TPA: Pol3p [Saccharomyces cerevisiae S288c]
Length = 1097
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|109125666|ref|XP_001116065.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Macaca
mulatta]
Length = 1327
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 187/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----KEEDLLQAWSTFIRVMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P + R+ + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAMHEGLLM--PVV--RSEGGEDYTGATVIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG++ +
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLT--------------------EDQFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|392300015|gb|EIW11106.1| Pol3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1097
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 377 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 436
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 437 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 493
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 494 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 548
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 549 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 605
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 606 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 646
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 685
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 600 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 638
>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
Length = 1091
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 135/579 (23%), Positives = 239/579 (41%), Gaps = 82/579 (14%)
Query: 131 YNYCFSTCLGRVEHLG-VSDSFPFGCIASRESNQSPPNKDSIHEAEITHPDCSKSSQIDF 189
Y Y + + EH+ D+ G + +SN D++ EA + + S +
Sbjct: 130 YFYVLTPTTFKEEHIKPFKDALDRGILDDMKSN-----PDNVQEAVVGVELVYRQSIFGY 184
Query: 190 NPDLFKSFIRKQLETPK-----RRICDSYAIDAMTPDTTGDYQMGLDNLN-EVTSHVENY 243
+ D F++ + PK +RI + I P G Q+ N++ ++ V+N
Sbjct: 185 SGDAKFPFLKISVAVPKLIATAKRIIEKNDIFPTFPGFYG--QVFETNIDFDIRFMVDNK 242
Query: 244 YLTVLAVEIHAISRALLKPDPA-------YDEVKAIFYYLYTCPPEED---------RKV 287
+E+H S +L PD EV F + + PE D
Sbjct: 243 ITGCNWIELHPKSYSLRTPDTTRIPLSRCQIEVDVAFNRIVSHEPEGDWLKIAPFRILSF 302
Query: 288 GIILIGQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSW 343
I G++ PE P+ M E E F I ++ P ++G ++ +F
Sbjct: 303 DIECAGRKGIFPEPNQDPVIQIANMVVCQGEHEPFIRNIFTLKSCAP--ILGSQVISFE- 359
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
+E+EL + E VR+ DPD+ GY I + YL+ R L + L
Sbjct: 360 ----------DERELLEKWAEFVREVDPDLFTGYNINNFDFPYLINRANHLKCSHFVYLG 409
Query: 404 RITEVEK-------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
RI ++ ++ +N + GR +L +L + L+SYT + ++ L
Sbjct: 410 RIKNIKSIVKDHIIQSKQMGRRENKLINFEGRTSFDLLLVLLRDYKLRSYTLNAVSFNFL 469
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFG 515
E+ +++ + + V Y ++ + I+L+++L + EMAR+ G
Sbjct: 470 QEQKEDVHHSIISDLQNGNEQTRRRLAV--YCLKDAYLPIKLLDKLMCVINYMEMARVTG 527
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +L+RG Q +V S +LR S + ++ + + + + ++EP Y D
Sbjct: 528 VSLSALLTRGQQIKVMSQLLRKSMESGYLLPTHRVNDSSEQFEGAT---VIEPLKGYYKD 584
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH--LGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS++IA+N C+ST + + LG+S
Sbjct: 585 PIATLDFSSLYPSIMIAHNLCYSTLIHAQQRNALGLS--------------------PDQ 624
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ +P FV S+R G+LP++L+ +L R K +K
Sbjct: 625 YSTTPCENYFVKTSVRKGLLPQILESLLTARKKAKFDLK 663
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS++IA+N C+ST +
Sbjct: 582 YKDPIATLDFSSLYPSIMIAHNLCYSTLI 610
>gi|62088700|dbj|BAD92797.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
variant [Homo sapiens]
Length = 1011
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 243/567 (42%), Gaps = 87/567 (15%)
Query: 167 NKDSIHEAEITHPD------CSKSSQIDFNPDLFKSFIR-----KQLETPKRRICD-SYA 214
++DS E+T P CS+ S ++ F+R +L P RR+ +
Sbjct: 175 SRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIR 234
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD---EVKA 271
+ + + Y+ +D E+ V+ + +E+ A AL + A E
Sbjct: 235 VAGLGTPSFAPYEANVDF--EIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADV 292
Query: 272 IFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKPI----QMNFVSNEKELF 318
++ + + PPE +++ + + G++ PE P+ + E E F
Sbjct: 293 LWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPF 352
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
+R P ++G +++++ E++L + +R DPD++ GY
Sbjct: 353 LRLALTLRPCAP--ILGAKVQSYE-----------KEEDLLQAWSTFIRIMDPDVITGYN 399
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEVKNTQLQMPGRI 429
I+ YL+ R L + L R+ + + + + R + K + M GR+
Sbjct: 400 IQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTK--VVSMVGRV 457
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
+++ ++L E L+SYT + +H L E+ ++T + + V Y +
Sbjct: 458 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAV--YCL 515
Query: 490 RVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
+ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +LR + + P
Sbjct: 516 KDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--P 573
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEH 606
+K + ++EP Y PI LDF SLYPS+++A+N C++T L G +
Sbjct: 574 VVKSEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQK 631
Query: 607 LGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
LG++ D F IR +P+G FV S+R G+LP++L+ +L R
Sbjct: 632 LGLTEDQF----------IR-----------TPTGDEFVKTSVRKGLLPQILENLLSARK 670
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLLI 692
K + K ++ LR + L +
Sbjct: 671 RAKAELA--KETDPLRRQVLDGRQLAL 695
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 596 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 636
>gi|259090299|pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 311 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 370
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 371 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 427
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 428 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 482
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 483 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 539
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 540 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 580
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+G FV R GILP +L E++ R K+ +++ K
Sbjct: 581 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 619
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 534 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 572
>gi|403299517|ref|XP_003940530.1| PREDICTED: DNA polymerase delta catalytic subunit [Saimiri
boliviensis boliviensis]
Length = 1046
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 179/395 (45%), Gaps = 57/395 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----KEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR ++ + P + R+ + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAKQEGLLM--PVV--RSEGGEDYTGATVIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+ +
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKED--------------------QFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+P+G FV S+R G+LP++L+ +L R K +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAEL 674
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+ +
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKE 634
>gi|402906428|ref|XP_003916004.1| PREDICTED: DNA polymerase delta catalytic subunit [Papio anubis]
Length = 1107
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 187/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----KEEDLLQAWSTFIRVMDPDVITGYNIQNFDLPYLISRAQTLKVETFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P + R+ + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAMHEGLLM--PVV--RSEGGEDYTGATVIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|115530809|emb|CAL49423.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like
[Xenopus (Silurana) tropicalis]
Length = 517
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%)
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS++IAYNYC+STCLG +E+LG + F FGC L V L +L+ ++T+SP+GVAFV
Sbjct: 7 PSIVIAYNYCYSTCLGNIENLGKYEDFKFGCSSLQVPPDLLYQLRHDITVSPNGVAFVKA 66
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
+R G+LP+ML+EIL TR+MVKQSMK+YK + L L
Sbjct: 67 CVRKGVLPRMLEEILKTRIMVKQSMKKYKHDKGLTRL 103
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 125 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPPN 167
PS++IAYNYC+STCLG +E+LG + F FGC S Q PP+
Sbjct: 7 PSIVIAYNYCYSTCLGNIENLGKYEDFKFGC----SSLQVPPD 45
>gi|406696978|gb|EKD00248.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 8904]
Length = 1169
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 50/286 (17%)
Query: 233 LNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT---CPPEEDRKVG- 288
+ + S E ++VL++E+ A SR LKPDPA DE+ A+FY P+ + G
Sbjct: 924 ITQKKSEREQRNMSVLSIEVFAPSRHQLKPDPAKDEIAAVFYCFQNDMESLPDTTKHPGY 983
Query: 289 ----IILIGQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWG 344
+++ + R + + + V +E +L + I+ V++WDPD+L G+E+ SWG
Sbjct: 984 YAGCVVVDSPQIAEHRARLQGVPCHVVDSELDLINWVIDAVKEWDPDVLTGWELHNASWG 1043
Query: 345 YLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR 404
YL R S L + ++LSR
Sbjct: 1044 YLSARAAES----------------------------------------FDLEMVRDLSR 1063
Query: 405 ITE--VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
+ + R + ++ GR +N+WR++R EVNL SY+FEN+++HVLH RIP
Sbjct: 1064 MVSDTTQNRKDGYSAHHTSTFKVNGRHTLNIWRIMRGEVNLNSYSFENVVFHVLHRRIPR 1123
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
+S LT W+ R+ + + RV +++ + I + +
Sbjct: 1124 YSAANLTALWKSRSPEHTARVLHMLFERVVIYAEVMDTAEIISKNA 1169
>gi|296477407|tpg|DAA19522.1| TPA: DNA polymerase delta catalytic subunit [Bos taurus]
Length = 987
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 63/400 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 320 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 371
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER------------GYVLGL 396
E++L + +R DPD++ GY I+ YL+ R G V+GL
Sbjct: 372 -----REEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPGFPLLGRVIGL 426
Query: 397 NLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
N R + + R + R + K + M GR+ +++ ++L E L+SYT + +H L
Sbjct: 427 RSN---IRESSFQSRQTGRRDSKV--VSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFL 481
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFG 515
E+ ++T + + V Y ++ + +RL+E+L + EMAR+ G
Sbjct: 482 GEQKEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTG 539
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG Q +V S +LR + + P +K + ++EP Y
Sbjct: 540 VPLGYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDV 595
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 596 PIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------Q 635
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 636 FIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAK 675
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 593 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 633
>gi|357613119|gb|EHJ68324.1| DNA polymerase delta catalytic subunit [Danaus plexippus]
Length = 974
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 41/335 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E E+ S + + R+ D DI+ GY I W YL+ R L ++ L RI + R+
Sbjct: 244 SEAEMLSKWSDFFRELDADIITGYNICNFDWPYLINRAKHLKVDCFDFLGRIKNI--RSV 301
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPLH 463
+D + +N + GR+ +L +L + L+SYT + YH L E + +H
Sbjct: 302 IKDTILQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVH 361
Query: 464 SWKLLTCWWEH---RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+ E+ R L + + YL ++L+ +L I EMAR+ G+
Sbjct: 362 HSIISDLQNENEQTRRRLAMYCLKDAYLP-----LKLLNKLMCIINYIEMARVTGVPLLC 416
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S +LR S+ ++ P+ + E +I EP+ Y DPI L
Sbjct: 417 LLTRGQQIKVVSQLLRKSKGAGYLM--PAYHSQGSEDQFEGATVI-EPKKGYYADPISTL 473
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T + P ++N++ ++T++PS
Sbjct: 474 DFASLYPSIMMAHNLCYTTLVP-----------PNIQKEINLN-------SDDVTVTPSN 515
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV R G+LP++L+ +L R K +KE K
Sbjct: 516 NMFVKAHKRKGLLPEILESLLAARKKAKADLKEEK 550
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DPI LDF SLYPS+++A+N C++T
Sbjct: 466 YADPISTLDFASLYPSIMMAHNLCYTT 492
>gi|195442888|ref|XP_002069178.1| GK23632 [Drosophila willistoni]
gi|194165263|gb|EDW80164.1| GK23632 [Drosophila willistoni]
Length = 1093
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 184/399 (46%), Gaps = 58/399 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENV---RQWDPDILIGYEIETFSWGYLL 347
G++ PE + P IQ+ N V N+ E FI N+ ++ P +IG ++
Sbjct: 306 GRKGIFPEAKMDPVIQIANMVINQGE-SEPFIRNIFTLKECAP--IIGSQVLCHD----- 357
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
E +L + VR+ DPDIL GY I YL+ R L + + L RI
Sbjct: 358 ------QETQLLDKWSSFVREVDPDILTGYNINNFDIPYLINRASHLKVKNFEFLGRIKN 411
Query: 408 VEKRNSSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
+ R+ +++V +N + GR+ +L +L + L+SYT + YH L E
Sbjct: 412 I--RSVIKEQVLQSKQMGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQE 469
Query: 459 RIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ ++T + R L + + YL +RL+ +L I EMAR+
Sbjct: 470 QKEDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLP-----LRLLGKLMAIVNYMEMARVT 524
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ +L+RG Q +V S +LR ++ F+ PS + E +I EP+ Y
Sbjct: 525 GVPLESLLTRGQQIKVLSQLLRKAKTKGFIM--PSYTSQGSDEQYEGATVI-EPKRGYYA 581
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN- 633
DPI LDF SLYPS+++A+N C++T + LG S +++ +Q +
Sbjct: 582 DPISTLDFASLYPSIMMAHNLCYTTLI-----LGGSKD----------KLKNKGLIQDDQ 626
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ +P+ FV +R G+LP++L+ +L R K +K
Sbjct: 627 VECTPANNYFVKAELRRGLLPEILESLLAARKRAKADLK 665
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DPI LDF SLYPS+++A+N C++T +
Sbjct: 580 YADPISTLDFASLYPSIMMAHNLCYTTLI 608
>gi|19112916|ref|NP_596124.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe 972h-]
gi|12644199|sp|P30316.2|DPOD_SCHPO RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|6048293|emb|CAB58156.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe]
Length = 1086
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 186/398 (46%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ P+ P IQ+ + + + F+ NV D ++G ++ F
Sbjct: 305 GRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNVFCVDTCSQIVGTQVYEFQ-------- 356
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----- 405
N+ E+ S + + VR DPD+LIGY I YLL+R L ++ L RI
Sbjct: 357 ---NQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGRIHNFFS 413
Query: 406 ----TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
T + E K T + PGR+ +++ ++++ + L+SY+ + L E+
Sbjct: 414 VAKETTFSSKAYGTRESKTTSI--PGRLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKE 471
Query: 462 LHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ ++T + R L + + YL + RL+++L +EMAR+ G+
Sbjct: 472 DVHYSIITDLQNGTADSRRRLAIYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVP 526
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
F +L+RG Q +V S + R + ++ V P+I+ E +I EP Y PI
Sbjct: 527 FNFLLARGQQIKVISQLFRKALQHDLVV--PNIRVNGTDEQYEGATVI-EPIKGYYDTPI 583
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL--T 635
LDF SLYPS++ A+N C++T L D N + L KL+Q++ +
Sbjct: 584 ATLDFSSLYPSIMQAHNLCYTTLL-----------------DSNTA--ELLKLKQDVDYS 624
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++P+G FV +R G+LP +L ++L+ R K +K+
Sbjct: 625 VTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKK 662
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS++ A+N C++T L
Sbjct: 579 YDTPIATLDFSSLYPSIMQAHNLCYTTLL 607
>gi|254567878|ref|XP_002491049.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|238030846|emb|CAY68769.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|328352425|emb|CCA38824.1| DNA polymerase delta subunit 1 [Komagataella pastoris CBS 7435]
Length = 1093
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 183/398 (45%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V + + F+ NV + ++G +I +F
Sbjct: 305 GRKGIFPEPEHDPVIQIANVVSRTGESTPFVRNVFTVNSCAPIVGSQIFSFE-------- 356
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQ 400
E+EL + + + + DPD++IGY I + YL+ R L + Q
Sbjct: 357 ---KEEELLRKWRDFIIKVDPDVIIGYNIANFDFPYLINRAATLKVQDFPFFSRVKTSKQ 413
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
E+ T K +R+ N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 414 EIKDSTFSSKAYGTRE---NKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSSHFLGEQK 470
Query: 461 PLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
++T E R L + + YL +RL E+L + +EMAR+ G+
Sbjct: 471 EDVQHSIITDLQNGDAETRRRLAVYCLKDAYLP-----LRLAEKLMCLVNYTEMARVTGV 525
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LSRG Q +V S + R + V P++K + E +I +P Y P
Sbjct: 526 PFSFLLSRGQQIKVISQLFR--KCLELDIVIPNMKSDSVNEEYEGATVI-DPVRGYYDVP 582
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
+ LDF SLYPS+++A+N C++T L + ++ LG+ ++
Sbjct: 583 VATLDFASLYPSIMMAHNLCYTTLLNKPTIDRLGLVKD-------------------KDY 623
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++P+G FV + +R GILP +LQE+L R K +K
Sbjct: 624 ILTPNGDFFVKEDLRKGILPTILQELLAARKKAKYDLK 661
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y P+ LDF SLYPS+++A+N C++T L + ++ LG+
Sbjct: 579 YDVPVATLDFASLYPSIMMAHNLCYTTLLNKPTIDRLGL 617
>gi|378755079|gb|EHY65106.1| hypothetical protein NERG_01552 [Nematocida sp. 1 ERTm2]
Length = 1020
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 162/365 (44%), Gaps = 69/365 (18%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV---- 408
++EKE+ + + + V +PD+L GY I YLL+R LGL + SR E
Sbjct: 245 NDEKEMLTAWSQWVSVLNPDVLTGYNITQFDMPYLLDRASTLGLPDFKYFSRTKEPVHMN 304
Query: 409 -------------------------------EKRNSSRDEVKNTQLQMPGRIVINLWRLL 437
+K SS L +PGRIV ++ ++
Sbjct: 305 KLPQTNNTGNNSGNNGNSGNNTGNNNGKEGDDKSGSSGGFTAPATLVVPGRIVFDMLDIV 364
Query: 438 RHEVNLQSYTFENIMYHVLHE-RIPLHSWKLLTCWW---EHRTHLYKWMTVEHYLIRVTG 493
+ E NL SY+ ++ L E + +H ++L + E R L + + YL
Sbjct: 365 KKEFNLHSYSLNSVSSVFLGEQKEDVHYTQILALYNGTDETRKRLGVYCLKDTYLP---- 420
Query: 494 IIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQR 553
IR++ + E+AR+ G+ F +++RG RV S +LR ++ N++ + I Q
Sbjct: 421 -IRIMYTKNLFINYCELARVTGVPFEYLVNRGQGIRVLSQLLRQAKAYNYI-LPVVIGQS 478
Query: 554 AHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 613
++EP Y++P++VLD+ SLYPS+I+AYN C++T L + +
Sbjct: 479 ETYEGG----YVMEPNKGFYSNPVVVLDYASLYPSIIMAYNMCYTTLLSKEQ-------- 526
Query: 614 PFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ K + T SP+G F+ K + GILP +L +L+ R V+ +K
Sbjct: 527 ------------ASKMDKSEYTESPTGDCFLRKEKKPGILPVILTGLLEGRKAVRAELKN 574
Query: 674 YKFSE 678
K E
Sbjct: 575 IKDPE 579
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y++P++VLD+ SLYPS+I+AYN C++T L +
Sbjct: 493 FYSNPVVVLDYASLYPSIIMAYNMCYTTLLSK 524
>gi|321470374|gb|EFX81350.1| hypothetical protein DAPPUDRAFT_317527 [Daphnia pulex]
Length = 1139
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 182/393 (46%), Gaps = 55/393 (13%)
Query: 293 GQESELPEV-RTKPIQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + + IQ+ N VS E FI N+ D +IG ++ ++
Sbjct: 362 GRKGIFPEADKDRVIQIANMVSLYGET-EPFIRNIMTLDTCAPIIGSQVMSYKL------ 414
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---- 405
E EL + + VR+ DPDI+ GY I YLL R L L RI
Sbjct: 415 -----EDELLDKWADFVREVDPDIITGYNICNFDLPYLLNRAKHLKRGKFDFLGRIKDKK 469
Query: 406 -----TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
T ++ + R E N + + GR+ +L +L + L+SYT ++ YH L E+
Sbjct: 470 SAIKETMIQSKQMGRRE--NKSINIEGRVQFDLLLVLLRDYKLRSYTLNSVSYHFLCEQK 527
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
++T E + + V Y ++ + +RL+++L + EMAR+ G+
Sbjct: 528 EDVHHSIITELQEGNPQTRRRLAV--YCLKDAHLPLRLLDKLMCLTNYMEMARVTGVPLS 585
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q +V S +LR ++ + P K A + ++EP Y+ PI
Sbjct: 586 YLLTRGQQIKVVSQLLRKAKEQGLLM--PVHKAEAGEEFEGAT--VIEPIRGYYSQPIAT 641
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI-SP 638
LDF SLYPS+++A+N C+++ L + R KL+++ I +P
Sbjct: 642 LDFSSLYPSIMMAHNLCYTSLL---------------------NPRDKDKLKEDQYIKTP 680
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G FV S+R G+LP++L+ +L R K+ +
Sbjct: 681 AGNYFVKASVRKGLLPEILEALLAARKKAKKDL 713
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+ PI LDF SLYPS+++A+N C+++ L
Sbjct: 635 YSQPIATLDFSSLYPSIMMAHNLCYTSLL 663
>gi|156616275|ref|NP_002682.2| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|379030588|ref|NP_001243778.1| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|50403732|sp|P28340.2|DPOD1_HUMAN RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase subunit delta p125
gi|21885469|gb|AAM76971.1| polymerase (DNA directed), delta 1, catalytic subunit [Homo
sapiens]
gi|119592262|gb|EAW71856.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa,
isoform CRA_a [Homo sapiens]
gi|119592263|gb|EAW71857.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa,
isoform CRA_a [Homo sapiens]
Length = 1107
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 243/567 (42%), Gaps = 87/567 (15%)
Query: 167 NKDSIHEAEITHPD------CSKSSQIDFNPDLFKSFIR-----KQLETPKRRICD-SYA 214
++DS E+T P CS+ S ++ F+R +L P RR+ +
Sbjct: 173 SRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIR 232
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD---EVKA 271
+ + + Y+ +D E+ V+ + +E+ A AL + A E
Sbjct: 233 VAGLGTPSFAPYEANVDF--EIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADV 290
Query: 272 IFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKPI----QMNFVSNEKELF 318
++ + + PPE +++ + + G++ PE P+ + E E F
Sbjct: 291 LWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPF 350
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
+R P ++G +++++ E++L + +R DPD++ GY
Sbjct: 351 LRLALTLRPCAP--ILGAKVQSYE-----------KEEDLLQAWSTFIRIMDPDVITGYN 397
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEVKNTQLQMPGRI 429
I+ YL+ R L + L R+ + + + + R + K + M GR+
Sbjct: 398 IQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTKV--VSMVGRV 455
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
+++ ++L E L+SYT + +H L E+ ++T + + V Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAV--YCL 513
Query: 490 RVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
+ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +LR + + P
Sbjct: 514 KDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--P 571
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEH 606
+K + ++EP Y PI LDF SLYPS+++A+N C++T L G +
Sbjct: 572 VVKSEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQK 629
Query: 607 LGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
LG++ D F IR +P+G FV S+R G+LP++L+ +L R
Sbjct: 630 LGLTEDQF----------IR-----------TPTGDEFVKTSVRKGLLPQILENLLSARK 668
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLLI 692
K + K ++ LR + L +
Sbjct: 669 RAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|335290039|ref|XP_003127412.2| PREDICTED: DNA polymerase delta catalytic subunit [Sus scrofa]
Length = 1107
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 180/398 (45%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R++ +
Sbjct: 373 -----REEDLLQAWSNFIRVMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVSGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 GYLLSRGQQVKVVSQLLRQAMREGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIT 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGV-SDSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ +D F
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTADQF---------------------I 638
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 639 KTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK 676
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGV-SDSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ +D F
Sbjct: 594 YDVPITTLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTADQF 637
>gi|344299649|gb|EGW30002.1| DNA polymerase delta catalytic subunit [Spathaspora passalidarum
NRRL Y-27907]
Length = 1079
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 158/331 (47%), Gaps = 35/331 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+ E+E+ + + + + DPD++IGY YLL+R LGL R+ + +
Sbjct: 347 AKEEEMLMHWRQFITEVDPDVIIGYNTSNFDIPYLLDRAKALGLKDFPFFGRLKRI--KQ 404
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+D V +N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 405 EVKDAVFSSRAYGTRENKVVNIDGRMQLDLLQFVQREYKLRSYTLNSVSAHFLGEQKEDV 464
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + V Y ++ + +RL+++L + +EMAR+ G+ F +L
Sbjct: 465 QHSIITDLQNGTKETRRRLAV--YCLKDAFLPLRLLDKLMCLVNYTEMARVTGVPFSYLL 522
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q +V S + R + + P++K E +I EP Y PI LDF
Sbjct: 523 SRGQQIKVISQLFRKCLEEDIII--PNMKSEGTNEEYEGATVI-EPIRGYYDVPIATLDF 579
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+++A+N C++T L + +I++ +++ T +P+G
Sbjct: 580 SSLYPSIMMAHNLCYTTLLSK------------------SAIQAYGLTEEDYTRTPNGDF 621
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV R GILP +L E+L R K +K+
Sbjct: 622 FVKSHKRQGILPTILNELLTARKKAKADLKK 652
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 570 YDVPIATLDFSSLYPSIMMAHNLCYTTLLSK 600
>gi|14250670|gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo
sapiens]
gi|123998555|gb|ABM86879.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
gi|157929094|gb|ABW03832.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
Length = 1107
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 243/567 (42%), Gaps = 87/567 (15%)
Query: 167 NKDSIHEAEITHPD------CSKSSQIDFNPDLFKSFIR-----KQLETPKRRICD-SYA 214
++DS E+T P CS+ S ++ F+R +L P RR+ +
Sbjct: 173 SRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIR 232
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD---EVKA 271
+ + + Y+ +D E+ V+ + +E+ A AL + A E
Sbjct: 233 VAGLGTPSFAPYEANVDF--EIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADV 290
Query: 272 IFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKPI----QMNFVSNEKELF 318
++ + + PPE +++ + + G++ PE P+ + E E F
Sbjct: 291 LWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPF 350
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
+R P ++G +++++ E++L + +R DPD++ GY
Sbjct: 351 LRLALTLRPCAP--ILGAKVQSYE-----------KEEDLLQAWSTFIRIMDPDVITGYN 397
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEVKNTQLQMPGRI 429
I+ YL+ R L + L R+ + + + + R + K + M GR+
Sbjct: 398 IQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTKV--VSMVGRV 455
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
+++ ++L E L+SYT + +H L E+ ++T + + V Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAV--YCL 513
Query: 490 RVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
+ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +LR + + P
Sbjct: 514 KDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--P 571
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEH 606
+K + ++EP Y PI LDF SLYPS+++A+N C++T L G +
Sbjct: 572 VVKSEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQK 629
Query: 607 LGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
LG++ D F IR +P+G FV S+R G+LP++L+ +L R
Sbjct: 630 LGLTEDQF----------IR-----------TPTGDEFVKTSVRKGLLPQILENLLSARK 668
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLLI 692
K + K ++ LR + L +
Sbjct: 669 RAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|397485032|ref|XP_003813667.1| PREDICTED: DNA polymerase delta catalytic subunit [Pan paniscus]
Length = 1107
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 61/417 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----KEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAMHEGLLM--PVVKSEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG++ D F IR
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQF----------IR---------- 639
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 -TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|410258776|gb|JAA17355.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
gi|410333287|gb|JAA35590.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
Length = 1107
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 61/417 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----KEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAYLPLRLLERLMVLVNAVEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 SYLLSRGQQVKVVSQLLRQAMHEGLLM--PVVKSEGGEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG++ D F IR
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQF----------IR---------- 639
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 -TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
T30-4]
gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans
T30-4]
Length = 1609
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 172/396 (43%), Gaps = 56/396 (14%)
Query: 292 IGQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
+G++ PE P IQ+ V E+ + I NV D ++G + F
Sbjct: 262 MGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLDTCKPIVGAHVMEFE------- 314
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE-- 407
E ++ + V++ DPDI+ GY I Y+L RG L L L R+
Sbjct: 315 ----KEGDMLESWARFVQEVDPDIITGYNIANFDIPYVLNRGKALKLQNYNLLGRLANSA 370
Query: 408 --VEKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL---HER 459
+EK+ S + +N + + GR + +L ++R NL SY+ + L E
Sbjct: 371 AYMEKKTFSSAQYGKSENVKTTIHGRCMFDLLPIMRRSQNLSSYSLNAVSAAFLGQQKED 430
Query: 460 IPLHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+P H L + R L + + YL +RL+++L ++ EMAR+ G+
Sbjct: 431 VP-HGIISDLQRGTDDDRHRLAVYCLKDAYLP-----LRLLDKLSYLVNFIEMARVSGVP 484
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
++ RG Q +V S++LR + + V + Q E ++EP+ Y+ PI
Sbjct: 485 IDFLIERGQQIKVFSMLLRKCKDASLVVPTLPRSQNNEDVGYEGA-TVIEPKKAFYSVPI 543
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS++ A+N C+ST + G V+ L D
Sbjct: 544 ATLDFASLYPSIMQAFNLCYSTLVAPGDVDKLAPGD----------------------YE 581
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
SPSG FV + GILP +L+E+L R K+ M
Sbjct: 582 KSPSGDIFVTSKKKKGILPLILEEVLAARKQAKRDM 617
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y+ PI LDF SLYPS++ A+N C+ST + G V+ L D
Sbjct: 538 FYSVPIATLDFASLYPSIMQAFNLCYSTLVAPGDVDKLAPGD 579
>gi|169806198|ref|XP_001827844.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi
H348]
gi|161779292|gb|EDQ31315.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi
H348]
Length = 968
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 38/334 (11%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H+ E++L + + + +PDI++GY I+ + YLLER +L L L R ++
Sbjct: 249 HWFDKEEDLLMAWNKFIHDENPDIILGYNIKNFDFPYLLERANILKLKEFARLGRTNKIS 308
Query: 410 KR------NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
K +S ++ + + GRI+ +++ +L+ + L+SY+ ++ H L E+
Sbjct: 309 KSIKKTQSSSQFGSLEFNDITIEGRIIFDIFHILKRDFKLRSYSLNSVSMHFLKEQKEAV 368
Query: 464 SWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
S+ L E R + + + YL +R+ ++L+ + E+AR+ +
Sbjct: 369 SYSSIHSLQNGNKETRRRIATYCLKDAYLP-----LRIFKKLNIFTKYIELARVTYVPIE 423
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
L+RG+ +V S++ + + N++ IK ++ P Y DPI V
Sbjct: 424 FFLTRGTSIKVLSLIYKEANAYNYIIPDMEIKDG---DTKYDGAFVINPLKGFYKDPIAV 480
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+II+ N C++T L + + L ++ +P+
Sbjct: 481 LDFCSLYPSIIISNNLCYTTLLND---------------KMAARFKELDIIK-----TPT 520
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G FV I+ G+LP +L+++L R + K+ +KE
Sbjct: 521 GDCFVSSHIKKGLLPIILEKLLSNRKLTKKLLKE 554
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
Y DPI VLDF SLYPS+II+ N C++T L
Sbjct: 473 FYKDPIAVLDFCSLYPSIIISNNLCYTTLLN 503
>gi|145342057|ref|XP_001416112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576336|gb|ABO94404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 982
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 187/407 (45%), Gaps = 59/407 (14%)
Query: 287 VGIILIGQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDI---LIGYEIETFS 342
V I G++ P+ + P IQ+ + E+ I V W D ++G ++ +F
Sbjct: 188 VDIECAGRKGHFPDAQLDPVIQIATLVTEQGSDKPIIRAV--WTLDTCAPIVGADVLSFK 245
Query: 343 WGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL 402
+E+EL + +R DPD+LIGY I + YLLER LG+
Sbjct: 246 -----------DERELLRNWGNFLRGCDPDLLIGYNIVNFDFPYLLERAEKLGVADFPYW 294
Query: 403 SRI--TEVEKRNS-----SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
R+ T+V R++ + ++ ++ GR+ ++ R ++ + L SY+ + H
Sbjct: 295 GRLIGTKVRMRDTVFSSKAYGTHESKEISCEGRVQFDMLRAIQRDYKLSSYSLNAVSAHF 354
Query: 456 LHERIPLHSW----KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMA 511
L E+ + +L E R L + + YL + RL+++L ++ EMA
Sbjct: 355 LGEQKEDVHYSAISELQNGTPETRRRLAVYCLKDAYLPQ-----RLLDKLMYMYNYIEMA 409
Query: 512 RLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQ-----RAHMRAPESLPLIL 566
R+ G+ +L+RG +V S +LR +R N + + +KQ +A +L
Sbjct: 410 RVTGVPLNYLLTRGQSIKVMSQLLRKARQRNML-IPHHVKQGGGNVQAEGGVAYEGATVL 468
Query: 567 EPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
+ ++ Y PI LDF SLYPS+++A+N C+ST + + + +G + +G
Sbjct: 469 DAKAGYYEMPIATLDFASLYPSIMMAHNLCYSTLVPK-DKVGKLNPDDYGT--------- 518
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
SPSG FV S GILP++L+E+L R K +K+
Sbjct: 519 ----------SPSGDTFVKASKVKGILPEILEELLGARKRAKADLKK 555
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C+ST
Sbjct: 475 YEMPIATLDFASLYPSIMMAHNLCYST 501
>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1097
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 39/341 (11%)
Query: 346 LLERHFVSN--EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN------ 397
++ H +SN E EL + + V+ DPDIL GY I+ YLL R L
Sbjct: 364 IVGAHVISNATEDELLWEWSQFVKVADPDILTGYNIQNFDVPYLLNRAKALSRKSKKLEK 423
Query: 398 ------LNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENI 451
L +++ + + ++S+ + +N + + GR++ ++ + L SY+ ++
Sbjct: 424 FGEWGRLRGKMATMKDTTFQSSAYGKRENVETSIDGRVMFDMLPYMFRNHKLSSYSLNSV 483
Query: 452 MYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEM 510
+L ++ + +++ + + V Y I+ + ++L+E+L + EM
Sbjct: 484 SAELLGQQKEDVHYSIISDLQNGSDEDRRRLAV--YCIKDALLPMKLMEKLSVMVNYIEM 541
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES 570
AR+ G+ +LSRG Q +V S++LR +R N + P++ + A + ++EP+
Sbjct: 542 ARVTGVPLNFLLSRGQQIKVFSMLLRKTRSVNLLI--PNLPKHAVDQETYEGATVIEPKK 599
Query: 571 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y +PI LDF SLYPS++ AYN C+ST + + ++ K
Sbjct: 600 AFYEEPIATLDFASLYPSIMQAYNLCYSTLVAGED-------------------KNKLKP 640
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
Q LT SPSG FV + G+LP +L E+L R K+ M
Sbjct: 641 DQYLT-SPSGDVFVKSEVTKGLLPAILDELLTARKQAKRDM 680
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
+ Y +PI LDF SLYPS++ AYN C+ST +
Sbjct: 598 KKAFYEEPIATLDFASLYPSIMQAYNLCYSTLVA 631
>gi|156081829|ref|XP_001608407.1| DNA polymerase zeta catalytic subunit [Plasmodium vivax Sal-1]
gi|148800978|gb|EDL42383.1| DNA polymerase zeta catalytic subunit, putative [Plasmodium vivax]
Length = 1866
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 141/283 (49%), Gaps = 39/283 (13%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H NE++L I+ + + P +I YE + + Y+ +R L + S T +
Sbjct: 680 HIAQNERDLIKKLIDKINFYSPLSIISYENDKYNVSYINQRCLALDMG-----SFYTHIS 734
Query: 410 KRNSSRD--EVKNT-QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K N R+ E+ N + GR++ +L++L ++ + +FEN+ H L+ +P S
Sbjct: 735 KLNDQREFTELNNAYNKNIKGRLIESLYKL----SSVSNTSFENLCKHYLNVIVPSISRH 790
Query: 467 LLTCWWEHRT---------------------------HLYKWMTVEHYLIRVTGIIRLIE 499
L W+ + + Y+ +TV + L RV ++ + +
Sbjct: 791 TLYRWYSYAAGEARSDEKGARERGRGGDGAIGGEPAYYPYRHLTVRYLLKRVNLLLLIYD 850
Query: 500 QLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAP 559
++ F+ R + + +++RGSQF +ES +++L N F+ SPS K+ R
Sbjct: 851 KIGFLKRKMNFCKYLHVDLLSLINRGSQFIIESFLVKLCMRNGFLLYSPSNKEIMEQRPI 910
Query: 560 ESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
+PL+L+P+S + P++V DFQSLYPS++IA+N C+STCLG
Sbjct: 911 LHIPLVLQPKSSINFFPLLVFDFQSLYPSIVIAFNICYSTCLG 953
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 14/67 (20%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSP--PNKDSI 171
P++V DFQSLYPS++IA+N C+STCLG + RE Q P P + S+
Sbjct: 927 PLLVFDFQSLYPSIVIAFNICYSTCLGTLS------------FKRREGRQEPREPVEASL 974
Query: 172 HEAEITH 178
+E H
Sbjct: 975 GRSEPPH 981
>gi|367000613|ref|XP_003685042.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
gi|357523339|emb|CCE62608.1| hypothetical protein TPHA_0C04580 [Tetrapisispora phaffii CBS 4417]
Length = 1096
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 159/344 (46%), Gaps = 48/344 (13%)
Query: 350 HFVSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN---------- 397
H S+EKE + + E V + DPD++IGY YL++R L +N
Sbjct: 371 HIFSHEKEEDMLRQWREFVVKADPDVIIGYNTSNFDLPYLIDRAKALKVNEFPYFGRLVN 430
Query: 398 LNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
+NQE+ T K +R + + + GR+ ++L + ++ E L+SYT + H L
Sbjct: 431 VNQEVKESTFSSKAYGTR---SSKNVNIDGRLQLDLLQFVQREYKLRSYTLNAVSAHFLG 487
Query: 458 ERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
E+ + ++T E R L + + YL +RL+E L + +EM+R+
Sbjct: 488 EQKEDVHYSIITDLQNGDSETRRRLAVYCLKDAYLP-----LRLLENLMALVNYTEMSRV 542
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLY 573
G+ F +LSRG Q +V S + R + + P++ + E +I EP Y
Sbjct: 543 TGVPFSYLLSRGQQIKVVSQLFR--KCLEIDTLIPNMGSQGSDEQYEGATVI-EPIRGYY 599
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
PI LDF SLYPS+++A+N C++T R V+ L + KL
Sbjct: 600 DLPIATLDFNSLYPSIMMAHNLCYTTLCNRETVQRLDL-------------------KLN 640
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
++ I+P+ FV R GILP +L E++ R K +K K
Sbjct: 641 EDYIITPNNDYFVTTKKRHGILPIILNELISARKRAKNDLKNEK 684
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 109 RLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
R Y D PI LDF SLYPS+++A+N C++T R
Sbjct: 596 RGYYDLPIATLDFNSLYPSIMMAHNLCYTTLCNR 629
>gi|405951999|gb|EKC19859.1| DNA polymerase delta catalytic subunit [Crassostrea gigas]
Length = 1090
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 162/358 (45%), Gaps = 32/358 (8%)
Query: 325 VRQWDPDILIGYEIETFSWGYLLERHFVSNEKE--LFSIFIENVRQWDPDILIGYEIETL 382
+RQ + D I S ++ +SNEKE L + E VR DPDI+ GY I+
Sbjct: 328 IRQGERDPFIRNVFTLRSCAPVVGSQVISNEKESDLLKKWAEFVRVVDPDIITGYNIQNF 387
Query: 383 SWGYLLERGYVLGLNLNQELSR-------ITEVEKRNSSRDEVKNTQLQMPGRIVINLWR 435
+ Y++ R L + L R I E ++ + +N + + GR+ +L +
Sbjct: 388 DFPYVINRANHLKVMDFTFLGRQRDVRSVIKESMFQSKQMGKRENKVINIEGRVQFDLLQ 447
Query: 436 LLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII 495
+L + L+SYT + +H L E+ ++T + + V + L +
Sbjct: 448 ILLRDYKLRSYTLNAVSFHFLQEQKEDVQHSIITDLQNGNDQTRRRLAV-YCLKDAILPL 506
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
RL+++L + EMAR+ G+ +LSRG Q +V S +LR ++ + V + ++
Sbjct: 507 RLLDKLMCVINYMEMARVTGVPLPYLLSRGQQVKVVSQLLRKAKEQDLVLPTHKVETGDE 566
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
++EP Y PI LDF SLYPS+++A+N C++T L +H
Sbjct: 567 YEGA----TVIEPVKGFYDSPIATLDFSSLYPSIMMAHNLCYTTLLS--QH--------- 611
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
SI+ +PSG F+ R G+LP++L+ +L R K +K+
Sbjct: 612 -------SIQKEGLTPDQYIKTPSGNYFIKTQHRKGLLPEILEHLLSARKKAKADLKK 662
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 579 FYDSPIATLDFSSLYPSIMMAHNLCYTTLLSQ 610
>gi|164655413|ref|XP_001728836.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
gi|159102722|gb|EDP41622.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
Length = 970
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 164/321 (51%), Gaps = 46/321 (14%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NE +L + + V++ DPD++IGY I + YLL+R L + L R E R+
Sbjct: 240 NEVQLLEAWSDFVQRVDPDVVIGYNISNFDFPYLLDRAKALKVTTFPFLGR--EKNARSE 297
Query: 414 SRD-----------EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
++D + K+T+LQ GRI +++ ++++ + L+SY+ ++ + L E+
Sbjct: 298 AKDTHFSSKAYGTRDSKHTELQ--GRIQLDMLQVMQRDYKLRSYSLNSVSFEFLKEQKED 355
Query: 463 HSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
L+T E R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 356 VHHSLITELQNSGPEARRRLAVYCLKDAYLPQ-----RLMDKLMCLINYTEMARVTGVPF 410
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S + R +R + ++ P+ K E +L+P+ Y P+
Sbjct: 411 NYLLSRGQQIKVISQLFRKAREDGYLI--PAYKGEGGDEQYEG-ATVLDPKQGYYDKPVA 467
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTIS 637
LDF SLYPS+++A+N C++T + + H +I LK ++ ++ ++
Sbjct: 468 TLDFASLYPSIMMAHNLCYTTLVDK--H----------------TIDRLKLVEDKDYVVT 509
Query: 638 PSGVAFVDKSIRCGILPKMLQ 658
P+ FV K++R G+LP +L+
Sbjct: 510 PNNNYFVCKTVRKGLLPDVLE 530
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y P+ LDF SLYPS+++A+N C++T + +
Sbjct: 462 YDKPVATLDFASLYPSIMMAHNLCYTTLVDK 492
>gi|449451191|ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 182/397 (45%), Gaps = 51/397 (12%)
Query: 293 GQESELPEVRTKPI--QMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P+ N V+ + E F+ NV + + G ++ +F
Sbjct: 306 GRKGHFPEPTQDPVIQVANLVTLQGE-DQPFVRNVMTLNTCSPIAGVDVLSFD------- 357
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
E+++ + + +R+ DPDI+IGY I YL+ER L + L RI +
Sbjct: 358 ----TERDVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAEALKIPEFPLLGRIRNSK 413
Query: 410 KRN-----SSRD--EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP- 461
R SSR ++ ++ + GR+ +L ++++ + L SY+ ++ H L E+
Sbjct: 414 VRVKDTTFSSRQLGTRESKEITVEGRVQFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKED 473
Query: 462 -LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
HS L E R L + + YL + RL+++L FI EMAR+ G+
Sbjct: 474 VHHSIISDLQNGNAETRRRLAVYCLKDAYLPQ-----RLLDKLMFIYNYVEMARVTGVPI 528
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG +V S +LR ++ N V P+ K + +LE + Y PI
Sbjct: 529 SFLLSRGQSIKVLSQLLRKAKQKNLVI--PNAKHAGSDQGTYEGATVLEARAGFYEKPIA 586
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+++AYN C+ T + P LN+ K +P
Sbjct: 587 TLDFASLYPSIMMAYNLCYCTLVT-----------PEDACKLNLPPEHFNK-------TP 628
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
SG FV +++ GILP++L+E+L R K +KE K
Sbjct: 629 SGEIFVKPNLQKGILPEILEELLTARKRAKADLKEAK 665
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+R Y PI LDF SLYPS+++AYN C+ T
Sbjct: 576 ARAGFYEKPIATLDFASLYPSIMMAYNLCYCT 607
>gi|403343190|gb|EJY70918.1| DNA polymerase [Oxytricha trifallax]
Length = 1071
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 176/372 (47%), Gaps = 52/372 (13%)
Query: 311 VSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWD 370
+ EKE F + +++ P ++G ++ ++ E+E+ + + + + D
Sbjct: 298 IHGEKEPFVRNVFTLKECAP--IVGSQVSSYQ-----------REEEMLRAWKDFLVEVD 344
Query: 371 PDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR---NSSRDEVKNTQ----L 423
PDI+ GY I + Y++ R L +N RI VE R N+ + T+ +
Sbjct: 345 PDIITGYNIVNFDFPYIINRAIALHMNKFAHFGRILGVESRIKANTFSSKALGTRETKDI 404
Query: 424 QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER---IPLHSWKLLTCWWEH-RTHLY 479
+ GR+ ++ +++ E L+SYT ++ L E+ +P L E+ R L
Sbjct: 405 NIDGRVQFDMLQVILREHKLRSYTLNSVSAQFLGEQKEDVPHTIISDLQNGTEYTRRRLA 464
Query: 480 KWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSR 539
+ + YL +RL+E+L + +EM+R+ G+ + +RG Q +V S + R ++
Sbjct: 465 VYCLKDAYLP-----LRLMEKLMCLFNLTEMSRVTGVPISFLFTRGQQIKVASQLYRKAK 519
Query: 540 LNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFST 599
+ + + + A M +++EP YTDP+ LDF SLYPS+++A+N C+S+
Sbjct: 520 EYDLII---PVDKTAAMEGKYEGAVVIEPTRGFYTDPVATLDFASLYPSIMMAHNLCYSS 576
Query: 600 CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQE 659
+ E +G K +N +P+G F+ +S++ G+LP +L+E
Sbjct: 577 LIPAHE-IG-------------------KHPLENYIKTPNGDYFMKQSVKKGLLPMILEE 616
Query: 660 ILDTRLMVKQSM 671
+L R +Q +
Sbjct: 617 LLAARKRARQEL 628
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R K D P K + ++ + + YTDP+ LDF SLYPS+++A
Sbjct: 512 SQLYRKAKEYDLIIPVDKTAAMEGKYEGAVVIEPTRG--FYTDPVATLDFASLYPSIMMA 569
Query: 131 YNYCFSTCL 139
+N C+S+ +
Sbjct: 570 HNLCYSSLI 578
>gi|66809121|ref|XP_638283.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum
AX4]
gi|74853854|sp|Q54N97.1|DPOD1_DICDI RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|60466714|gb|EAL64765.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum
AX4]
Length = 1104
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 35/330 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-TEVEKRNS 413
E++L + + V + DPD++IGY I YL+ R L + L RI T + K S
Sbjct: 379 EEDLLREWRKFVIKVDPDVIIGYNIVNFDIPYLISRARQLKIPEFALLGRIKTTISKIKS 438
Query: 414 SRDEVKN------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
+R N ++ MPGR +L + ++ + L SY+ N+ H L E+ + +
Sbjct: 439 TRFSSSNLGTRESKEISMPGRTQFDLMQAIQRDHKLTSYSLNNVSAHFLKEQKEDVHFSI 498
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
++ + + V Y I+ + +RL+++L + +EMAR+ G+ +L RG
Sbjct: 499 ISDLQNGTDDDRRRLAV--YCIKDAVLPMRLLDKLMILINYTEMARVTGVPLSYLLGRGE 556
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
+V S + R + + NF+ P+ K + +++EP Y PI LDF SLY
Sbjct: 557 GIKVLSQLYRKAMVENFLI--PTYKVTGKGEKFQGA-IVIEPTPGFYDTPIATLDFTSLY 613
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL-TISPSGVAFVD 645
PS+++A+N C+ST L S KKL + T +P G F+
Sbjct: 614 PSIMMAHNLCYSTLL---------------------SAEEAKKLPPEIYTTTPFGDHFIK 652
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+ G+LP++L+E+L R K +K K
Sbjct: 653 SDTKKGLLPRILEELLSARKKAKDELKNEK 682
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS+++A+N C+ST L E
Sbjct: 599 FYDTPIATLDFTSLYPSIMMAHNLCYSTLLSAEE 632
>gi|410982336|ref|XP_003997513.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Felis
catus]
Length = 1109
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 186/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPD++ GY I+ YL+ R L + L R++ +
Sbjct: 371 -----REEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPFLGRVSGL 425
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSTIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMREGLLM--PVVKTEGVEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 637
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 638 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 691
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 632
>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium
dendrobatidis JAM81]
Length = 1125
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 205/428 (47%), Gaps = 59/428 (13%)
Query: 268 EVKAIFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKP-IQM-NFVSNEKE 316
EV + ++ + PE D K+ + I G+ PE + P IQ+ N V+ + +
Sbjct: 299 EVDIVAQHIVSYQPEGDWSKIAPLRILSFDIECAGRRGIFPEAQIDPVIQIANMVALQGD 358
Query: 317 LFSTFIENVRQWDP-DILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILI 375
F+ N+ + +IG + +F +E E+ + + +++ DPDI+I
Sbjct: 359 T-KPFVRNIFTLNTCSSIIGTHVMSFQ-----------SESEMLQGWSDFIQEVDPDIII 406
Query: 376 GYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR------NSSRDEVKNTQ-LQMPGR 428
GY I + YLL+R LGL+ L R+T + + +S ++T+ + + GR
Sbjct: 407 GYNINGFDFPYLLDRADTLGLDNFAFLGRVTASKAKAKDTRFSSKAYGTRDTKSINLEGR 466
Query: 429 IVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHSW--KLLTCWWEHRTHLYKWMTV 484
+ ++L ++++ + L+SY+ ++ H L E+ HS L E R L +
Sbjct: 467 LQLDLLQIMQRDYKLRSYSLNSVSAHFLGEQKEDVHHSIISDLQNGNDETRRRLAVYCLK 526
Query: 485 EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFV 544
+ YL +RL+ +L + EMAR+ G+ F +L+RG Q +V S + R + + + +
Sbjct: 527 DAYLP-----LRLLNKLMLVINYMEMARVTGVPFNYLLTRGQQIKVVSQLYRKAIMEDLL 581
Query: 545 AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 604
P+++ E +++EP Y PI LDF SLYPS+++A+N C+ST
Sbjct: 582 I--PALEVEGSDEQYEG-AIVIEPLKGFYQVPIATLDFTSLYPSIMMAHNLCYSTY---- 634
Query: 605 EHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTR 664
+++S ++L V R K+ +P+ F S+R G+LP +L+++L R
Sbjct: 635 ----IANSDLAAKLNL-VEGRDYKR-------TPNNDLFAVASLRKGLLPTILEDLLSAR 682
Query: 665 LMVKQSMK 672
K +K
Sbjct: 683 KRAKSDLK 690
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD-SFPFGCIASRESNQSPPN 167
Y PI LDF SLYPS+++A+N C+ST ++ SD + + R+ ++P N
Sbjct: 606 FYQVPIATLDFTSLYPSIMMAHNLCYST------YIANSDLAAKLNLVEGRDYKRTPNN 658
>gi|410982334|ref|XP_003997512.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Felis
catus]
Length = 1111
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 186/416 (44%), Gaps = 59/416 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPD++ GY I+ YL+ R L + L R++ +
Sbjct: 373 -----REEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPFLGRVSGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSTIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 544 GYLLTRGQQVKVVSQLLRQAMREGLLM--PVVKTEGVEDYTGAT--VIEPLKGYYDVPIA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 600 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------QFIK 639
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+P+G FV S+R G+LP++L+ +L R K + K ++ LR + L +
Sbjct: 640 TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 634
>gi|426196824|gb|EKV46752.1| hypothetical protein AGABI2DRAFT_186127 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 182/400 (45%), Gaps = 62/400 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE +T P IQ+ N V+ E FI NV + ++G ++ TF+
Sbjct: 285 GRKGIFPEAQTDPVIQIANMVTRHGE-DKPFIRNVFNLNTCANIVGSQVLTFT------- 336
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
E LF + + V + DPD++ GY I + YL++R L + L R+ V
Sbjct: 337 ----EEASLFQAWRDFVEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLGRLRNV- 391
Query: 410 KRNSSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
R EVKNT + GR+ +++ + ++ E L+SYT ++ L
Sbjct: 392 -----RTEVKNTHFSSRAYGQRDSKETPLYGRLQMDILQFMQREHKLRSYTLNSVCAQFL 446
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + E R L + + YL + RL+++L +EMAR
Sbjct: 447 GEQKEDVHHSVITELYNGTPESRRRLAVYCLKDAYLPQ-----RLLDKLMCFVNYTEMAR 501
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LSRG +V S + R + +V P++K ++EP+
Sbjct: 502 VTGVPFNYLLSRGQSIKVLSQLFRKANEEGYVI--PALKGEGTDGEAYEGATVIEPKKGY 559
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y PI LDF SLYPS+++A+N C++T + D +DL ++ + +Q
Sbjct: 560 YDVPIATLDFSSLYPSIMMAHNLCYTTLI---------DGNMIEKLDL---VKDVDYIQ- 606
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ FV R G+LP +L++++ R K +K
Sbjct: 607 ----TPNNDFFVTSMKRKGLLPTILEDLISARKRAKADLK 642
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C++T +
Sbjct: 560 YDVPIATLDFSSLYPSIMMAHNLCYTTLI 588
>gi|444316824|ref|XP_004179069.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
gi|387512109|emb|CCH59550.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
Length = 1104
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 163/336 (48%), Gaps = 44/336 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E E+ + + + + DPD++IGY I+ + YL++R L + SRI+ ++
Sbjct: 386 EAEMLQHWKDFIIEVDPDVMIGYNIQNFDFPYLIDRAKALKIEDFPYFSRISNSKQVVKE 445
Query: 411 -----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ + E KNT + GR+ +L++ ++ E L+SYT + + L+E+
Sbjct: 446 AVFSSKATGTRESKNTNID--GRLQFDLFQFIQREYKLRSYTLNAVSANFLNEQKEDVHH 503
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++T E R L + + YL +RL+++L + +EMAR+ G+ F +
Sbjct: 504 SIITDLQLGDSETRRRLAVYCLKDAYLP-----LRLLDKLMGLVNYTEMARVTGVPFSYL 558
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L+RG Q +V S + R + + P+I + E +I EP Y PI LD
Sbjct: 559 LTRGQQIKVISQLFR--KCLEIDTIIPNITSKGSDEQYEGATVI-EPIRGYYDIPIATLD 615
Query: 582 FQSLYPSVIIAYNYCFST-CLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPS 639
F SLYPS+++A+N C++T C ++ + SL KL ++ I+P+
Sbjct: 616 FNSLYPSIMMAHNLCYTTLCNKQI-------------------VNSLNLKLDEDYIITPN 656
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
G FV + R GILP +L +++ R K +K+ K
Sbjct: 657 GDYFVTEKRRHGILPIILNDLISARKKAKNDLKKEK 692
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 607 YDIPIATLDFNSLYPSIMMAHNLCYTT 633
>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
Length = 1050
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 174/397 (43%), Gaps = 58/397 (14%)
Query: 292 IGQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
+G++ PE P IQ+ V E+ + I NV D ++G + F
Sbjct: 262 MGRKGHFPEAEQDPVIQIANVVQEQGSHTPIIRNVFVLDTCKPIVGAHVMEFE------- 314
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE-- 407
E E+ + V++ DPDI+ GY I YLL RG L L L R+
Sbjct: 315 ----KEGEMLEKWARFVQEVDPDIITGYNIANFDIPYLLNRGKALKLQNYNLLGRLANKA 370
Query: 408 --VEKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL---HER 459
+EK+ S + +N + + GR + +L ++R L SY+ + L E
Sbjct: 371 AFMEKKTFSSAQYGKSENVKTTIHGRCMFDLLPIMRRSQQLSSYSLNAVSAAFLGQQKED 430
Query: 460 IPLHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+P H L + R L + + YL +RL+++L ++ EMAR+ G+
Sbjct: 431 VP-HGIISDLQRGTDDDRHRLAVYCLKDAYLP-----LRLLDKLSYLVNFIEMARVSGVP 484
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSI-KQRAHMRAPESLPLILEPESRLYTDP 576
++ RG Q +V S++LR + + V P++ + + + A ++EP+ Y+ P
Sbjct: 485 IDFLIERGQQIKVFSMLLR--KCKDASLVVPTLPRSQNNEDAGYEGATVIEPKKAFYSVP 542
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS++ A+N C+ST + G V+ L D
Sbjct: 543 IATLDFASLYPSIMQAFNLCYSTLVAPGDVDKLAPGD----------------------Y 580
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
SPSG FV + GILP +L+E+L R K M
Sbjct: 581 ERSPSGDIFVTSKKKKGILPLILEEVLAARKQAKWDM 617
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
+ Y+ PI LDF SLYPS++ A+N C+ST + G V+ L D
Sbjct: 535 KKAFYSVPIATLDFASLYPSIMQAFNLCYSTLVAPGDVDKLAPGD 579
>gi|410054333|ref|XP_003316601.2| PREDICTED: DNA polymerase delta catalytic subunit, partial [Pan
troglodytes]
Length = 648
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 180/401 (44%), Gaps = 65/401 (16%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G + PE P+ + E E F +R P ++G +++++
Sbjct: 234 GHKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 285
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 286 -----KEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 340
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 341 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 398
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L + EMAR+ G
Sbjct: 399 KEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLP-----LRLLERLMVLVNAVEMARVTG 453
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG Q +V S +LR + + P +K + ++EP Y
Sbjct: 454 VPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--PVVKSEGGEDYTGAT--VIEPLKGYYDV 509
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQ 632
PI LDF SLYPS+++A+N C++T L G + LG++ D F IR
Sbjct: 510 PIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTEDQF----------IR------- 552
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 553 ----TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK 589
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 507 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 547
>gi|390596710|gb|EIN06111.1| delta DNA polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1052
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 185/401 (46%), Gaps = 63/401 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E FI NV + ++G ++ ++
Sbjct: 267 GRKGIFPEANVDPVIQIANMVTIQGE-SKPFIRNVFTLNSCAHIVGSQVLSYD------- 318
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
+E ++ + + V Q DPD++IGY I YL++R L N L R+ V
Sbjct: 319 ----DESQMLQAWRDFVEQVDPDVVIGYNISNFDLPYLMDRAKALKANKFPFLGRMRNV- 373
Query: 410 KRNSSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
R +VK+T M GR+ ++L ++++ E L+SYT ++ L
Sbjct: 374 -----RTQVKDTHFSSKAYGQRDSKETAMEGRLQLDLLQVMQREQKLRSYTLNSVCAQFL 428
Query: 457 HERIP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ HS +L E R L + + YL + RL+++L ++ +EMAR
Sbjct: 429 GEQKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMYLVNYTEMAR 483
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +L+RG +V S + R + N+ + P K E +I EP+
Sbjct: 484 VTGVPFNYLLARGQSIKVLSQLFR--KANDEGYLVPVFKGEGSDEQYEGATVI-EPKKGY 540
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y PI LDF SLYPS+++A+N C++T L + ID ++ + +Q
Sbjct: 541 YDSPIATLDFSSLYPSIMMAHNLCYTTLLDK------------ATIDRLQLVKDVDYIQ- 587
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV + R G+LP +L++++ R K +K+
Sbjct: 588 ----TPNNDFFVTSTKRKGLLPTILEDLISARKRAKADLKK 624
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 541 YDSPIATLDFSSLYPSIMMAHNLCYTTLLDKA 572
>gi|149056044|gb|EDM07475.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Rattus norvegicus]
Length = 1099
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 424 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 481
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 482 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 539
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 540 GYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 595
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 596 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 635 KTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ 672
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 633
>gi|148690785|gb|EDL22732.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Mus musculus]
Length = 1101
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|348559458|ref|XP_003465533.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cavia
porcellus]
Length = 1105
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 178/400 (44%), Gaps = 63/400 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G ++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGARVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER------------GYVLGL 396
E++L + VR DPD++ GY I+ YL+ R G V+GL
Sbjct: 371 -----QEEDLLQAWSLFVRTVDPDVITGYNIQNFDLPYLISRAQTLKVKGFPLLGRVVGL 425
Query: 397 NLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
N R + + R R + K + M GR+ +++ ++L E L+SYT + +H L
Sbjct: 426 PSN---IRDSSFQSRQMGRRDSKV--VSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFL 480
Query: 457 HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFG 515
E+ ++T + + V Y ++ + +RL+E+L + EMAR+ G
Sbjct: 481 GEQKEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTG 538
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG Q +V S +LR + + P +K + ++EP Y
Sbjct: 539 VPLSYLLSRGQQVKVVSQLLRQTMRERMLM--PVVKTEGGEDYTGAT--VIEPLKGYYDV 594
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L G + LG +D + IR
Sbjct: 595 PIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLG---------LDADQFIR-------- 637
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 638 ---TPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGV-SDSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ +D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLDADQF 635
>gi|81157941|dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyrenoidosa]
Length = 1087
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 44/334 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-------NLNQELSRIT 406
+EK+L + + V + DPDI+IGY I YLL R L + + ++
Sbjct: 357 HEKDLLLRWRDLVLETDPDIIIGYNIVNFDLPYLLNRADTLKIPQFWTWGRMRNRRCKMK 416
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHS 464
+ + + ++ + GR+ +L + ++ + L SY+ ++ H L E+ HS
Sbjct: 417 DARFSSKAYGTHDFKEITIEGRVQFDLLQAIQRDHKLSSYSLNSVSAHFLGEQKEDVHHS 476
Query: 465 --WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
KL E R L + + YL + RL+++L + EMAR+ G+ +L
Sbjct: 477 DISKLQDGNAESRRRLAIYCLKDAYLPQ-----RLVDKLMLMYNYVEMARVTGVPMSYLL 531
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----LILEPESRLYTDPII 578
+RG +V S +LR SR V P++K+ A E + +LEP + Y P+
Sbjct: 532 ARGQSIKVFSQILRKSRTKGLVV--PNMKRGGD--AGEGVAYEGATVLEPRAGYYDRPVA 587
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+++A+N C++T L + G FP ++LT +P
Sbjct: 588 TLDFASLYPSIMMAHNLCYTTLLPK----GQEKMFP----------------SEHLTFTP 627
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ FV S+ G+LP++LQE+L R K+ M+
Sbjct: 628 NNDVFVKPSLAMGVLPEILQELLTARKRAKKDME 661
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 152
R Y P+ LDF SLYPS+++A+N C++T L + G FP
Sbjct: 578 RAGYYDRPVATLDFASLYPSIMMAHNLCYTTLLPK----GQEKMFP 619
>gi|402465764|gb|EJW01429.1| hypothetical protein EDEG_00023 [Edhazardia aedis USNM 41457]
Length = 671
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 136/265 (51%), Gaps = 28/265 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+EK+L + + DPDI+IGY I+ + YL +R ++L + + + + +
Sbjct: 259 DEKKLIESWRDYFVNEDPDIVIGYNIKNFDFPYLQDRAHILQI---ENFASVGRSSRPMK 315
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER---IP 461
RD+V + ++++ GRI+ ++ ++R + NL+SYT ++ H L E+ +P
Sbjct: 316 IRDQVFSSRQVGNRASKEIEIDGRIIFDMLSVIRRDFNLRSYTLNSVSVHFLKEQKEDVP 375
Query: 462 LHSWKLLTCW-WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
S + L E R + + + YL +RL + L+ + SEMAR+ G+
Sbjct: 376 YSSMRSLQQGDQETRKRIATYCLRDTYLP-----LRLFKILNVLANYSEMARVTGVPIEY 430
Query: 521 VLSRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+ +RG +V S +LR ++ +V +SPS +R+ ++ PE Y PI
Sbjct: 431 LSTRGQAIKVLSQILRKAKEEGYVLPQISPSGDERSFEGG-----FVMAPEKGFYASPIA 485
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR 603
VLDF SLYPS++I +N C++T L +
Sbjct: 486 VLDFSSLYPSIMIVHNLCYTTLLTK 510
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI VLDF SLYPS++I +N C++T L +
Sbjct: 479 FYASPIAVLDFSSLYPSIMIVHNLCYTTLLTK 510
>gi|438134|emb|CAA79895.1| DNA-directed DNA polymerase [Mus musculus]
Length = 1105
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|3122029|sp|P97283.1|DPOD1_MESAU RecName: Full=DNA polymerase delta catalytic subunit
gi|1840089|gb|AAB47254.1| DNA polymerase delta catalytic subunit [Mesocricetus auratus]
Length = 1103
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 178/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWPNFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 424 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 481
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y +R + +RL+E+L + EMAR+ G+
Sbjct: 482 KEDVQHSIITDLQNGNEQTRRRLAV--YCLRDAFLPLRLLERLMVLVNNVEMARVTGVPL 539
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 540 GYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 595
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 596 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 635 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 672
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 633
>gi|149056045|gb|EDM07476.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_c [Rattus norvegicus]
gi|149056048|gb|EDM07479.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_c [Rattus norvegicus]
Length = 1103
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 424 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 481
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 482 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 539
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 540 GYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 595
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 596 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 635 KTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ 672
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 633
>gi|254587977|ref|NP_035261.3| DNA polymerase delta catalytic subunit [Mus musculus]
gi|341940458|sp|P52431.2|DPOD1_MOUSE RecName: Full=DNA polymerase delta catalytic subunit
gi|74139374|dbj|BAE40829.1| unnamed protein product [Mus musculus]
gi|74195649|dbj|BAE39632.1| unnamed protein product [Mus musculus]
gi|74223279|dbj|BAE40772.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGSEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|14318657|gb|AAH09128.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus
musculus]
gi|30962877|gb|AAH52670.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus
musculus]
Length = 1105
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|149056046|gb|EDM07477.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
gi|149056047|gb|EDM07478.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
Length = 964
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 424 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 481
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 482 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 539
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 540 GYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 595
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 596 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 635 KTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ 672
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 633
>gi|11067381|ref|NP_067694.1| DNA polymerase delta catalytic subunit [Rattus norvegicus]
gi|3913500|sp|O54747.1|DPOD1_RAT RecName: Full=DNA polymerase delta catalytic subunit
gi|2687728|emb|CAA10946.1| DNA polymerase delta, catalytic subunit [Rattus norvegicus]
Length = 1103
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 424 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 481
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 482 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 539
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 540 GYLLSRGQQVKVVSQLLRQAMREGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 595
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 596 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 635 KTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ 672
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 633
>gi|148690786|gb|EDL22733.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_e [Mus musculus]
Length = 1105
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|26353290|dbj|BAC40275.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|198429892|ref|XP_002125320.1| PREDICTED: similar to Polymerase (DNA directed), delta 1, catalytic
subunit [Ciona intestinalis]
Length = 1064
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 34/328 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-------NLNQELSRIT 406
E+ L F + VR DPD++ GY I+ YL+ R L + + + +++I
Sbjct: 333 TEEGLLQAFSDFVRAVDPDVISGYNIQNFDLPYLINRAAHLKVANFPFLGRIKKSVTKIK 392
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
E + ++ + Q+ M GR+ +++ L E L+SYT + +H L E+
Sbjct: 393 ETKFQSKQMGSREMKQINMEGRVQFDVFVALLREQKLRSYTLNAVSFHFLGEQKEDVHHS 452
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++T + + V Y ++ + IRL+++L FI EMAR+ G+ +L+RG
Sbjct: 453 IITELQHGNAQSRRRLAV--YCLKDALLPIRLLDKLMFIINYMEMARVTGVPLSYLLTRG 510
Query: 526 SQFRVESIMLRLSRLNNFVA-VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
+V S +LR ++ + + V P+ A +++P Y PI LDF S
Sbjct: 511 QSIKVISQLLRKTKEADLLMPVIPTSNDDEFTGA-----TVIDPIKGYYNQPITTLDFSS 565
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++ A+N C++T L + N + L ++ +PSG FV
Sbjct: 566 LYPSIMQAHNLCYTTLLRK-----------------NSKEKDLLG-PEDFIKTPSGDYFV 607
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMK 672
S+R G+LP +L+ +L R K MK
Sbjct: 608 KASVRKGLLPGILESLLTARTNAKALMK 635
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 97 DSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+ D F ++ D + Y PI LDF SLYPS++ A+N C++T L
Sbjct: 537 NDDEFTGATVIDPIKGYYNQPITTLDFSSLYPSIMQAHNLCYTTLL 582
>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1066
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 187/399 (46%), Gaps = 59/399 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ N V+ + E FI NV + ++G ++ +F
Sbjct: 281 GRKGIFPEAQVDPVIQIANMVTRQGE-SKPFIRNVFTLNTCAHIVGSQVISFQ------- 332
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQ 400
NE EL + E V + DPD++IGY I YL++R Y+ + Q
Sbjct: 333 ----NEAELLLKWREFVEEVDPDVVIGYNISGFDLPYLIDRAKALKAQKFPYLGRMTNKQ 388
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
+++ T + + + K T L GR+ I++ + ++ E L+SYT ++ L E+
Sbjct: 389 TVTKDTHFSSKAFGQRDSKETALD--GRLQIDILQYMQREYKLRSYTLNSVCAQFLGEQK 446
Query: 461 PLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
++T E R L + + YL + RL+++L +EMAR+ G+
Sbjct: 447 EDVHHSVITDLQNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYTEMARVTGV 501
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LSRG +V S + R + + ++ P+++ E +I EP+ Y P
Sbjct: 502 PFNFLLSRGQSIKVLSQLFRKANDDGYIV--PALRGEGSDEQYEGATVI-EPKKGYYDVP 558
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS+++A+N C++T L + VE L + ++ + +Q
Sbjct: 559 IATLDFSSLYPSIMMAHNLCYTTLLDKSTVERLKL--------------VKDVDYIQ--- 601
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV + R G+LP +L+E++ R K +K+
Sbjct: 602 --TPNNDLFVKSTRRKGLLPTILEELIGARKRAKADLKK 638
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y PI LDF SLYPS+++A+N C++T L + VE L
Sbjct: 555 YDVPIATLDFSSLYPSIMMAHNLCYTTLLDKSTVERL 591
>gi|380805135|gb|AFE74443.1| DNA polymerase delta catalytic subunit, partial [Macaca mulatta]
Length = 415
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 63/400 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E+E F +R P ++G +++++
Sbjct: 40 GRKGIFPEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAP--ILGAKVQSYE------ 91
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 92 -----KEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 146
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 147 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 204
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L + EMAR+ G
Sbjct: 205 KEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLP-----LRLLERLMVLVNAVEMARVTG 259
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ +LSRG Q +V S +LR + + P + R+ + ++EP Y
Sbjct: 260 VPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--PVV--RSEGGEDYTGATVIEPLKGYYDV 315
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 316 PIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED--------------------Q 355
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 356 FIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK 395
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 313 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 353
>gi|366990559|ref|XP_003675047.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
gi|342300911|emb|CCC68676.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
Length = 1099
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 156/335 (46%), Gaps = 42/335 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
E+++ + + + + DPD++IGY YL+ R L + + QE+
Sbjct: 381 EEDMLRHWRQFILEADPDVIIGYNTTNFDLPYLINRARALKVEEFPFFGRLKTVKQEIKD 440
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
K +R E KN + + GR+ ++L + + E L+SYT + H L E+
Sbjct: 441 TIFSSKAYGTR-ESKN--INIDGRLQLDLLQFAQREYKLRSYTLNAVSAHFLGEQKEDVH 497
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+ ++T E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 498 YSIITDLQNGDSETRRRLAVYCLKDAYLP-----LRLLEKLMGLVNYTEMARVTGVPFSY 552
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q +V S + R + V P++ +A E +I EP Y PI L
Sbjct: 553 LLSRGQQIKVVSQLFR--KCIQIDTVIPNMSSQASDEQYEGATVI-EPIRGYYDVPIATL 609
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T C V L K ++ I+P+G
Sbjct: 610 DFNSLYPSIMMAHNLCYTTL----------------CNKATVERLKLTK-DEDYVITPNG 652
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV IR GILP +L E+++ R K+ +K K
Sbjct: 653 DYFVTSKIRRGILPIILDELINARKRAKKDLKNEK 687
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 602 YDVPIATLDFNSLYPSIMMAHNLCYTT 628
>gi|2827903|gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus musculus]
Length = 1105
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|148690782|gb|EDL22729.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Mus musculus]
Length = 1127
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 341 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 392
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 393 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 447
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 448 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 505
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 506 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 563
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 564 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 619
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 620 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 658
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 659 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 696
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 614 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 657
>gi|181620|gb|AAA58439.1| DNA polymerase-delta catalytic-subunit [Homo sapiens]
Length = 1107
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 130/567 (22%), Positives = 243/567 (42%), Gaps = 87/567 (15%)
Query: 167 NKDSIHEAEITHPD------CSKSSQIDFNPDLFKSFIR-----KQLETPKRRICD-SYA 214
++DS E+T P CS+ S ++ F+R +L P RR+ +
Sbjct: 173 SRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIR 232
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD---EVKA 271
+ + + Y+ +D E+ V+ + +E+ A AL + A E
Sbjct: 233 VAGLGTPSFAPYEANVDF--EIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADV 290
Query: 272 IFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKPI----QMNFVSNEKELF 318
++ + + PPE +++ + + G++ PE P+ + E E F
Sbjct: 291 LWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPF 350
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
+R P ++G +++++ E++L + +R DPD++ GY
Sbjct: 351 LRLALTLRPCAP--ILGAKVQSYE-----------KEEDLLQAWSTFIRIMDPDVITGYN 397
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEVKNTQLQMPGRI 429
I+ YL+ R L + L R+ + + + + R + K + M GR+
Sbjct: 398 IQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTKV--VSMVGRV 455
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
+++ ++L E L+S+T + +H L E+ ++T + + V Y +
Sbjct: 456 QMDMLQVLLREYKLRSHTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAV--YCL 513
Query: 490 RVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSP 548
+ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +LR + + P
Sbjct: 514 KDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLM--P 571
Query: 549 SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEH 606
+K + ++EP Y PI LDF SLYPS+++A+N C++T L G +
Sbjct: 572 VVKSEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQK 629
Query: 607 LGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
LG++ D F IR +P+G FV S+R G+LP++L+ +L R
Sbjct: 630 LGLTEDQF----------IR-----------TPTGDEFVKTSVRKGLLPQILENLLSARK 668
Query: 666 MVKQSMKEYKFSESLRNLTMLNSMLLI 692
K + K ++ LR + L +
Sbjct: 669 RAKAELA--KETDPLRRQVLDGRQLAL 693
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 594 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 634
>gi|148690787|gb|EDL22734.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_f [Mus musculus]
Length = 964
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|392574795|gb|EIW67930.1| hypothetical protein TREMEDRAFT_69477 [Tremella mesenterica DSM
1558]
Length = 1056
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 183/395 (46%), Gaps = 53/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + + F+ NV + ++G ++ F
Sbjct: 273 GRKGIFPEAHIDPVIQIAAMVTRQGESKPFVRNVFTLNTCAHIVGSQVLEFK-------- 324
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----T 406
+EK+L + + V++ DPD++IGY I YLL+R L LSR+ T
Sbjct: 325 ---DEKQLLIEWRKFVQEVDPDMVIGYNIANFDLPYLLDRAKALKAQEFPFLSRLKGQKT 381
Query: 407 EVEKRNSSR---DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-- 461
EV++ + S + + + M GR+ +++ ++++ + L+SYT + L E+
Sbjct: 382 EVKETHFSSKAYGQRDSKAVNMEGRLQLDMLQVMQRDYKLRSYTLNAVCAQFLGEQKEDV 441
Query: 462 LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
HS +L + R L + + YL + RL+++L +EMAR+ G+ F
Sbjct: 442 HHSIITELQNGTADSRRRLAVYCLKDAYLPQ-----RLLDKLMSFVNYTEMARVTGVPFN 496
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q +V S + R S + ++ P++K E +I EP Y PI
Sbjct: 497 YLLTRGQQIKVISQLFRASADSGYII--PAMKSEGSDEQYEGATVI-EPTKGYYDVPIAT 553
Query: 580 LDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++A+N C++T L G +E L + + ++ +
Sbjct: 554 LDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEG-------------------EDYVHT 594
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P+ F R G+LP +L+ +LD R KQ +K
Sbjct: 595 PNNDYFATTKRRKGLLPTVLRNLLDARKRAKQDLK 629
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+++A+N C++T L G +E L
Sbjct: 547 YDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERL 583
>gi|389745703|gb|EIM86884.1| hypothetical protein STEHIDRAFT_79581, partial [Stereum hirsutum
FP-91666 SS1]
Length = 1077
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 183/397 (46%), Gaps = 57/397 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E FI N+ + ++G ++ +F
Sbjct: 292 GRKGIFPEANVDPVIQIANMVTRQGE-SKPFIRNIFTLNTCSHIVGSQVLSFD------- 343
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---- 405
+E+E+ + + + DPD++IGY I YLL+R L ++ RI
Sbjct: 344 ----DEREMLQAWCNFINEADPDVVIGYNISNFDLPYLLDRAKALKVDDFPYFGRIKGNK 399
Query: 406 TEVE------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
T+V+ K RD + T M GR+ ++L + ++ E L+SYT ++ L E+
Sbjct: 400 TQVKDTHFSSKAFGQRDSKETT---MDGRLQLDLLQYMQREHKLRSYTLNSVCAQFLGEQ 456
Query: 460 IP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS +L E R L + + YL + RL+++L +EMAR+ G
Sbjct: 457 KEDVHHSVITELQNGTSESRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTG 511
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG +V S + R + N+ V PS+K E +I EP+ Y
Sbjct: 512 VPFNYLLSRGQSIKVLSQLFR--KANDEGYVVPSLKGEGSDEQYEGATVI-EPKKGYYDA 568
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++A+N C++T L D ++L I ++
Sbjct: 569 PIATLDFSSLYPSIMMAHNLCYTTLL---------DKNTIDRLNLQKDIDYIQ------- 612
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+P+ F+ R G+LP +L++++ R K +K
Sbjct: 613 -TPNNDFFIKSHKRKGLLPTVLEDLIGARKRAKADLK 648
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 566 YDAPIATLDFSSLYPSIMMAHNLCYTTLLDK 596
>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 961
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 184/394 (46%), Gaps = 51/394 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ P+ + P IQ+ + ++ FI NV + G +I +F+
Sbjct: 178 GRKGIFPDPQVDPVIQIASLVTKQGEDKPFIRNVFTLKSCSYIAGSDILSFN-------- 229
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR------ 404
E EL S + + DPD++IGY YLL+R G+ +L R
Sbjct: 230 ---EEVELLSAWRNFLGTVDPDVIIGYNTTNFDLPYLLKRANARGVQGFNKLGRLLHIGT 286
Query: 405 -ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-- 461
+ EV + + + + + + GR+ ++++ ++ E L++Y+ + L E+
Sbjct: 287 SVKEVHSSSRASGDRDSKECNINGRLQFDIFQYMQKEYKLRTYSLNAVSAKFLGEQKEDV 346
Query: 462 LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
HS +L + R L + + YL + RL+++L +EMAR+ G+ F
Sbjct: 347 HHSIISELQNGTPDSRRRLAIYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVPFN 401
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S ++R ++ + ++ P++K+++ E +I P + Y DPI
Sbjct: 402 FLLSRGQQIKVISQLMRRAKEDGYLI--PAMKEQSSDDQYEGATVI-PPTTGYYKDPIAT 458
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISP 638
LDF S+YPS++IA+N C++T + R +I L+ L + +P
Sbjct: 459 LDFSSMYPSIMIAHNICYTTMINR------------------ATISRLRLVLDVDYKQTP 500
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G FV+ + R G+LP +L+ +L R VK +K
Sbjct: 501 QGTFFVNPTRRKGVLPIILEHLLSARKRVKADLK 534
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFD-SDMFPSSSSRDRLYTDPIIVLDFQSLYPSVII 129
S L R K D P K +S+ ++ + + P ++ Y DPI LDF S+YPS++I
Sbjct: 414 SQLMRRAKEDGYLIPAMKEQSSDDQYEGATVIPPTTG---YYKDPIATLDFSSMYPSIMI 470
Query: 130 AYNYCFSTCLGRV 142
A+N C++T + R
Sbjct: 471 AHNICYTTMINRA 483
>gi|5011|emb|CAA41968.1| catalytic subunit DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1084
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 186/396 (46%), Gaps = 53/396 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ P+ P IQ+ + + + F+ NV D ++G ++ F
Sbjct: 305 GRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNVFCVDTCSQIVGTQVYEFQ-------- 356
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE--- 407
N+ E+ S + + VR DPD+LIGY I YLL+R L ++ L RI
Sbjct: 357 ---NQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGRIHNFFS 413
Query: 408 VEKRNSSRDEVKNTQ----LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
V K S + T+ +PGR+ +++ ++++ + L+SY+ + L E+
Sbjct: 414 VAKETSFSSKAYGTRESKTTSIPGRLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKEDV 473
Query: 464 SWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
+ ++T + R L + + YL + RL+++L +EMAR+ G+ F
Sbjct: 474 HYSIITDLQNGTADSRRRLAIYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVPFN 528
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q +V S + + ++ V P+I+ E +I EP Y PI
Sbjct: 529 FLLARGQQIKVISQLFCKALQHDLVV--PNIRVNGTDEQYEGATVI-EPIKGYYDTPIAT 585
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL--TIS 637
LDF SLYPS++ A+N C++T L D N + L KL+Q++ +++
Sbjct: 586 LDFSSLYPSIMQAHNLCYTTLL-----------------DSNTA--ELLKLKQDVDYSVT 626
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
P+G FV +R G+LP +L ++L+ R K +K+
Sbjct: 627 PNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKK 662
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS++ A+N C++T L
Sbjct: 579 YDTPIATLDFSSLYPSIMQAHNLCYTTLL 607
>gi|320162791|gb|EFW39690.1| DNA polymerase delta1 catalytic subunit [Capsaspora owczarzaki ATCC
30864]
Length = 1295
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 38/332 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK-- 410
+ E EL + + R D DI+ GY + GYLL R L + L RI V+
Sbjct: 545 ATEHELLRKWADFFRVVDADIVTGYNVINFDLGYLLNRAATLKVASFPFLGRIRGVKTTV 604
Query: 411 -----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP---- 461
+ + +N + M GR ++ ++L+ + L+SYT + L E+
Sbjct: 605 RFATFSSKAYGTRENKVITMEGRCPFDVLQILQRDYKLRSYTLNAVSALFLGEQKEDVHY 664
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
H +L + R L + + YL +RL+ +L + EMAR+ G+ F +
Sbjct: 665 SHISELQNGNEQTRRRLAVYCLKDAYLP-----LRLLGKLMCVVNYMEMARVTGVPFSYL 719
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
LSRG Q +V S + R R N V P ++ ++EP Y +PI LD
Sbjct: 720 LSRGQQIKVVSQLFRKVREQNLVI--PFVESGGSGDTQYEGATVIEPNRGYYENPIATLD 777
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+++A+N C++T + + G+S+ + + + T +P+G
Sbjct: 778 FASLYPSIMMAHNLCYTTLV----NPGMSN----------------RPSEADCTKTPTGH 817
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV ++R G+LP++L+++L+ R K +K+
Sbjct: 818 IFVKPNLRRGVLPEILEDLLEARKRAKNDLKK 849
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +PI LDF SLYPS+++A+N C++T
Sbjct: 769 YENPIATLDFASLYPSIMMAHNLCYTT 795
>gi|407927598|gb|EKG20487.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1097
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 187/390 (47%), Gaps = 45/390 (11%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V + + FI NV D LI + +LE F
Sbjct: 310 GRKGIFPEPNIDPVIQIANVVSIAGVEKPFIRNVFCLDTCSLI-------TNAQVLE--F 360
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TE 407
+ EK L + + + + DPD++IGY I + YLL+R L SR+ ++
Sbjct: 361 DTEEKMLMK-WRDFLEEADPDVIIGYNIANFDFPYLLDRAKHLKCGRFPYWSRLRNTMSQ 419
Query: 408 VEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
++ N S ++ N + GRI ++L +L++ + +L+SYT ++ H L E+
Sbjct: 420 AKETNFSSKQMGNRDTKATNTNGRIQLDLLQLVQRDYHLRSYTLNSVCAHFLGEQKEDVH 479
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++T + ++ + + V Y ++ + +RL+++L + +EMAR+ G+ F +LS
Sbjct: 480 HTMITELFNGDSNSRRRLAV--YCLKDAYLPMRLLDKLMCLVNYTEMARVTGVPFSFLLS 537
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P+++ + E +I EP Y PI LDF
Sbjct: 538 RGQQVKFLSQLYRKALEQQLVI--PNLRSESSEDQYEGATVI-EPTRGYYDVPIATLDFA 594
Query: 584 SLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPSVI A+N C++T L + VE LG+ K ++ ++P+G
Sbjct: 595 SLYPSVIQAHNLCYTTLLNKNSVEKLGL-------------------KKDEDYIVTPNGD 635
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F +R G+L ++ +E+L R K+ M
Sbjct: 636 LFCTTKVRKGLLTQIFEELLGARKQAKKEM 665
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPSVI A+N C++T L + VE LG+
Sbjct: 584 YDVPIATLDFASLYPSVIQAHNLCYTTLLNKNSVEKLGL 622
>gi|324120752|dbj|BAJ78767.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1005
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 33/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEK 410
E +L + + E +R DPDI+ GY YL+ER L L+ + L R+ + V+
Sbjct: 275 ESKLLNAWAEFMRDMDPDIVTGYNTNAFDLPYLVERATKLKLDRFKYLGRLLNVPSVVKD 334
Query: 411 RNSSRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
R + + Q + + GR ++ + R L+SYT N +L E+ +
Sbjct: 335 RTTQSKLMGKRQSKYVHLEGRTEYDMLVVARRTCKLRSYTLNNTSQEILGEQKEDVHYSQ 394
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
++ E + V + L +RL+ L+ E+AR+ G+ +++RG Q
Sbjct: 395 ISGLQEGNEQTRHRLAV-YCLKDAVLPLRLLNHLNSFTNDMELARVSGVTITTLMTRGEQ 453
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
+V + +L+ + ++ + + A ++EP YTDPI LDF SLYP
Sbjct: 454 IKVVTQLLKQGKQAGYLM---PVHRGAQSDEQYEGATVIEPIRGYYTDPIATLDFSSLYP 510
Query: 588 SVIIAYNYCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
S+++A+N C++T L E LG++D +T +P FV
Sbjct: 511 SIMMAHNLCYTTLLNPHNKEKLGLTDD--------------------QITKTPMNNYFVK 550
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKE 673
SIR G+LP++L+ +L R K+ + E
Sbjct: 551 PSIRRGLLPQILENLLAARKRAKKELAE 578
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG--RVEHLGVSD 149
YTDPI LDF SLYPS+++A+N C++T L E LG++D
Sbjct: 496 YTDPIATLDFSSLYPSIMMAHNLCYTTLLNPHNKEKLGLTD 536
>gi|435850447|ref|YP_007312033.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433661077|gb|AGB48503.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 903
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 165/343 (48%), Gaps = 43/343 (12%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL---GLNLNQELSRITEV 408
+ NE+ + F E +R +DPDILIGY I Y+ +R L G N+N R
Sbjct: 229 LQNEESMLKRFFEILRDYDPDILIGYNINDFDIPYISDRIKFLADSGTNINSGSGR---- 284
Query: 409 EKRNSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHSWK 466
+ R S ++ T + M GR+V+++ L+R + +L+ YT N+ +L E++ + +
Sbjct: 285 DGRPMSYRKIGTMTMISMAGRVVVDVLPLVRSQFSLKRYTLRNVAKELLDREKLDVAPSE 344
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
+ W + L K++ Y R + + + L+ +L + R ++R+ G EV+ G
Sbjct: 345 MEDHWNDEGEKLLKFI---DYARRDSELAMELVMKLQLLDRYIAISRVSGSLLQEVIDGG 401
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYTDPIIVLD 581
VE+++LR R+ + V + R S L +LEP+ L + +++LD
Sbjct: 402 QTSMVENLLLRECRIRDRVIPPKPDDNLVYSRNKNSEGLKGGEVLEPKKGLLEN-VVILD 460
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS-PSG 640
++SLYP++++A+N C+ST V P + TI+ PSG
Sbjct: 461 YKSLYPTIMMAHNLCYSTV--------VEKDIP----------------GEGETITPPSG 496
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
FV + GI+P +L+ +L+ R+ K+ MK+ + + L
Sbjct: 497 GRFVTADVSKGIMPAILENLLNRRIETKKRMKDISNEDEYKAL 539
>gi|393240523|gb|EJD48049.1| hypothetical protein AURDEDRAFT_102277 [Auricularia delicata
TFB-10046 SS5]
Length = 1067
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 181/398 (45%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + + FI N+ + ++G ++ +F
Sbjct: 284 GRKGIFPEANVDPVIQIASMVTRQGEDRPFIRNIFTLNSCAHIVGSDVRSFD-------- 335
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV-- 408
NE +L S + + V DPD++ GY I YLL+R L ++ +L R+T +
Sbjct: 336 ---NEADLLSAWQKFVVTVDPDVITGYNIANFDLPYLLDRAKALKVDGFNKLGRMTNIAT 392
Query: 409 --------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
K RD + + + GR+ +++++ ++ E L+SY+ + L E+
Sbjct: 393 AIKDTHFASKAFGQRD---SKECNIDGRLQLDMFQYMQREHKLRSYSLNAVSAQFLGEQK 449
Query: 461 P--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS +L E R L + + YL + RL+++L +EMAR+ G+
Sbjct: 450 EEVHHSAITELQNGTAESRRRLAIYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGV 504
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +L+RG Q +V S ++R ++ + ++ P++K E +I +P++ Y +P
Sbjct: 505 PFNFLLARGQQIKVISQLMRKAKEDGYLI--PAMKGEGSDDQYEGATVI-DPKTGYYKEP 561
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF S+YPS+++ +N C++T + ++ LG+ +
Sbjct: 562 IATLDFSSMYPSIMMGHNICYTTMTDKQTIDRLGLVKDVDY------------------- 602
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
T +P FV R G+LP +L+ +L R K +K
Sbjct: 603 TQTPQNTFFVKPGRRKGLLPTILENLLSARKRAKADLK 640
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R K D P K + + ++ + Y +PI LDF S+YPS+++
Sbjct: 520 SQLMRKAKEDGYLIPAMKGEGSDDQYEGATVIDPKTG--YYKEPIATLDFSSMYPSIMMG 577
Query: 131 YNYCFSTCLGR--VEHLGV 147
+N C++T + ++ LG+
Sbjct: 578 HNICYTTMTDKQTIDRLGL 596
>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
MF3/22]
Length = 1062
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ N V+ + E FI NV + ++G ++ ++
Sbjct: 277 GRKGIFPEAQIDPVIQIANMVTRQGE-SKPFIRNVFTLNTCSHIVGSQVLSYK------- 328
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
+E E+ + + V Q DPDI+IGY I YLL+R + L R+ V+
Sbjct: 329 ----SELEMLEAWRDFVEQVDPDIVIGYNIANFDLPYLLDRATAIKSKKFMYLGRMKGVK 384
Query: 410 ----------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
K RD + + M GR+ ++L + + E L+SYT + L E+
Sbjct: 385 TVVKDTHFSSKAFGQRD---SKETDMDGRLQLDLLQFMHREHKLRSYTLNAVCARFLGEQ 441
Query: 460 IP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS +L E R L + + YL + RL+++L EMAR+ G
Sbjct: 442 KEDVHHSVITELQNGTAESRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYIEMARVTG 496
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F+ +L RG +V S +LR R N+ ++P++K E +I EP+ Y
Sbjct: 497 VPFHFLLQRGQSIKVLSQLLR--RANDEGYITPTLKGGGTDEQYEGATVI-EPKKGYYDA 553
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+++A+N C++T L + ID ++ + +Q
Sbjct: 554 PIATLDFSSLYPSIMMAHNLCYTTLLDK------------HTIDRLNLVKGVDYIQ---- 597
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV K R G+LP +L++++ R K +K+
Sbjct: 598 -TPNNDFFVTKEKRKGLLPSVLEDLIAARKRAKADLKK 634
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + +PT K T ++ + Y PI LDF SLYPS+++A
Sbjct: 513 SQLLRRANDEGYITPTLKGGGTDEQYEGATV--IEPKKGYYDAPIATLDFSSLYPSIMMA 570
Query: 131 YNYCFSTCLGR 141
+N C++T L +
Sbjct: 571 HNLCYTTLLDK 581
>gi|258566822|ref|XP_002584155.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
gi|237905601|gb|EEP80002.1| DNA polymerase delta catalytic subunit [Uncinocarpus reesii 1704]
Length = 834
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 183/393 (46%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + F+ NV D +++ +I F
Sbjct: 321 GRKGVFPEAHQDPVIQIANIVTRYGESKPFVRNVFVLDTCSLIVNTQILEFD-------- 372
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR----IT 406
+E+++ + + +++ DPD++IGY I + YLL+R L + SR I+
Sbjct: 373 ---DERKMLMAWKDFLQKVDPDVIIGYNIANFDFPYLLDRAKHLDCSGFPYWSRLKSAIS 429
Query: 407 EVEKRNSSRDEVKNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ + N S ++ N + GRI ++L +L++ + L+SYT ++ H L E+
Sbjct: 430 QSKDSNFSSKQMGNRDTKSTNTNGRIQLDLLQLVQRDHQLRSYTLNSVCSHFLGEQKEDV 489
Query: 464 SWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 490 HHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFN 544
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q + S + R + N V P+++ E +I EP Y PI
Sbjct: 545 YLLSRGQQVKFISQLFRKALEQNLVI--PNLRNEGGEEQYEGATVI-EPVRDYYDVPIAT 601
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISP 638
LDF SLYPS+I A+N C++T L + S+ LK K ++ ++P
Sbjct: 602 LDFASLYPSIIQAHNLCYTTLLNK------------------TSVEKLKLKKDEDYIVTP 643
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 644 NGDMFCTAHVRKGLLSQILEELLSARKRAKKEL 676
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 595 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 626
>gi|409081586|gb|EKM81945.1| hypothetical protein AGABI1DRAFT_55049 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1089
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 183/402 (45%), Gaps = 66/402 (16%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE +T P IQ+ N V+ E FI NV + ++G ++ TF+
Sbjct: 303 GRKGIFPEAQTDPVIQIANMVTRHGE-DKPFIRNVFNLNTCANIVGSQVLTFT------- 354
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
E LF + + V + DPD++ GY I + YL++R L + L R+ V
Sbjct: 355 ----EEAPLFQAWRDFVEEVDPDVITGYNIANFDFPYLMDRAKALEVANFNYLGRLRNV- 409
Query: 410 KRNSSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
R EVKNT + GR+ +++ + ++ E L+SYT ++ L
Sbjct: 410 -----RTEVKNTHFSSRAYGQRDSKETPLYGRLQMDILQFMQREHKLRSYTLNSVCAQFL 464
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + E R L + + YL + RL+++L +EMAR
Sbjct: 465 GEQKEDVHHSVITELYNGTPESRRRLAVYCLKDAYLPQ-----RLLDKLMCFVNYTEMAR 519
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LSRG +V S + R + +V P++K ++EP+
Sbjct: 520 VTGVPFNYLLSRGQSIKVLSQLFRKANEEGYVI--PALKGEGTDGEAYEGATVIEPKKGY 577
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y PI LDF SLYPS+++A+N C++T + +E L DL ++ + +
Sbjct: 578 YDVPIATLDFSSLYPSIMMAHNLCYTTLIEGSMIEKL-----------DL---VKDVDYI 623
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
Q +P+ FV R G+LP +L++++ R K +K
Sbjct: 624 Q-----TPNNDFFVTSMKRKGLLPTILEDLISARKRAKADLK 660
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C++T +
Sbjct: 578 YDVPIATLDFSSLYPSIMMAHNLCYTTLI 606
>gi|255956273|ref|XP_002568889.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590600|emb|CAP96795.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 180/394 (45%), Gaps = 54/394 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V FI NV D +++ +I F
Sbjct: 316 GRKGIFPEPNMDPVIQIANVVTRYGETKPFIRNVFVLDTCSLIVNTQILEFE-------- 367
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----T 406
E+++ + + V + DPD++IGY I + YLL+R L +R+ T
Sbjct: 368 ---KEEKMLDAWRDFVEKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLKGFKT 424
Query: 407 EVEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
E + N S ++ N + GRI ++L +L++ + L+SYT ++ Y L E+
Sbjct: 425 EAKDANFSSKQMGNRDTKATNTNGRIQLDLLQLVQRDHQLRSYTLNSVSYEFLKEQKEDV 484
Query: 464 SWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 485 HHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFN 539
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q + S + R +R V + + ++EP+ Y P+
Sbjct: 540 FLLSRGQQVKFISQLFRKAREQQLVIPNSKPQDEQDYEGA----TVIEPKRGYYGVPVAT 595
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+I A+N C++T L + VE L +LKK ++ ++
Sbjct: 596 LDFASLYPSIIQAHNLCYTTLLNKSSVEKL------------------NLKK-DEDYIVT 636
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G F +R G+L ++L+E+L R K+ +
Sbjct: 637 PNGDMFCTTKVRKGLLSQILEELLSARKRAKKEL 670
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y P+ LDF SLYPS+I A+N C++T L + VE L +
Sbjct: 589 YGVPVATLDFASLYPSIIQAHNLCYTTLLNKSSVEKLNL 627
>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
Length = 1070
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 163/334 (48%), Gaps = 40/334 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR-- 411
+E EL ++ + DPDIL GY I YLL R VL L+ L R+ V +
Sbjct: 338 SEAELLEAWVSFLCATDPDILTGYNIVNFDLPYLLNRASVLHLSSFPFLGRLMGVMTKMH 397
Query: 412 -----NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+S+ ++ M GRI++++ ++L + L+SY+ ++ + L E+
Sbjct: 398 DTRLSSSAFGTHESKAFTMNGRIIVDMLQILVRDYKLRSYSLNSVSFEFLGEQKEDVHHS 457
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++T + + + + V Y ++ + RL+E+L + E+AR+ GI +LSRG
Sbjct: 458 IITELFHGNENTRRRLAV--YCLKDAYLPHRLMEKLMSLTNYMELARVAGIPLAWLLSRG 515
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPES----LPLILEPESRLYTDPIIVLD 581
+V S++ R + + + P +K +H + E+ ++EP+ Y PI LD
Sbjct: 516 HMIKVVSLLHRKAFPESLLI--PDLKNTSHNSSEEAESYEGATVIEPKRGFYKMPIATLD 573
Query: 582 FQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
F SLYPS+++A+N C+ST + RV++L D SPS
Sbjct: 574 FASLYPSIMMAHNICYSTLVRKDRVKYLKPEDYIK----------------------SPS 611
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G +V S++ G+L K+L+++L R + K+ +++
Sbjct: 612 GDCYVRPSVKKGVLSKILEDLLSARKVAKRELEQ 645
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R P+ P KN S SS +++ + ++ + Y PI LDF SLYPS+
Sbjct: 522 SLLHRKAFPESLLIPDLKNTSHNSSEEAESYEGATVIEPKRGFYKMPIATLDFASLYPSI 581
Query: 128 IIAYNYCFSTCL--GRVEHLGVSD 149
++A+N C+ST + RV++L D
Sbjct: 582 MMAHNICYSTLVRKDRVKYLKPED 605
>gi|148690783|gb|EDL22730.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_b [Mus musculus]
Length = 817
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 319 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 370
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 371 -----REEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRVTGL 425
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 426 --RSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 483
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 484 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 542 GYLLTRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 597
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 598 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 637 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 674
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 592 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 635
>gi|173384|gb|AAA35303.1| DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1086
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 185/398 (46%), Gaps = 57/398 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ P+ P IQ+ + + + F+ NV D ++G ++ F
Sbjct: 305 GRKGVFPDPSIDPVIQIASIVTQYGDSTPFVRNVFCVDTCSQIVGTQVYEFQ-------- 356
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----- 405
N+ E+ S + + VR DPD+LIGY I YLL+R L ++ L RI
Sbjct: 357 ---NQAEMLSSWSKFVRDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGRIHNFFS 413
Query: 406 ----TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
T + E K T + PGR+ +++ ++++ + L+SY+ + L E+
Sbjct: 414 VAKETTFSSKAYGTRESKTTSI--PGRLQLDMLQVMQRDFKLRSYSLNAVCSQFLGEQKE 471
Query: 462 LHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ ++T + R L + + YL + RL+++L +EMAR+ G+
Sbjct: 472 DVHYSIITDLQNGTADSRRRLAIYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVP 526
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
F +L+RG Q +V S + + ++ V P+I+ E +I EP Y PI
Sbjct: 527 FNFLLARGQQIKVISQLFCKALQHDLVV--PNIRVNGTDEQYEGATVI-EPIKGYYDTPI 583
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL--T 635
LDF SLYPS++ A+N C++T L D N + L KL+Q++ +
Sbjct: 584 ATLDFSSLYPSIMQAHNLCYTTLL-----------------DSNTA--ELLKLKQDVDYS 624
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++P+G FV +R G+LP +L ++L+ R K +K+
Sbjct: 625 VTPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKK 662
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS++ A+N C++T L
Sbjct: 579 YDTPIATLDFSSLYPSIMQAHNLCYTTLL 607
>gi|149056043|gb|EDM07474.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_a [Rattus norvegicus]
Length = 808
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 178/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 424 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 481
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 482 KEDVQHSIITDLQNGNEQTRRRLAV--YCLKDAFLPLRLLERLMVLVNNVEMARVTGVPL 539
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 540 GYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 595
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 596 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 634
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 635 KTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ 672
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 590 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 633
>gi|212530840|ref|XP_002145577.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074975|gb|EEA29062.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
Length = 1105
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 41/331 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVE 409
+E ++ + + + V++ DPD++IGY I + YLL+R L L+R+ +E +
Sbjct: 371 DEAKMLAAWQQFVQKVDPDVIIGYNIANFDFPYLLDRAKHLKCQSFPYLTRLPQIKSEAK 430
Query: 410 KRNSSRDEVKNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ N S ++ N + GRI ++L +L++ + L+SYT ++ L E+
Sbjct: 431 ETNFSSKQMGNRDTKSTNTNGRIQLDLLQLVQRDHQLRSYTLNSVCAEFLGEQKEDVHHT 490
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + + R L + + YL + RL+++L + +EMAR+ G+ F +L
Sbjct: 491 IITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNYLL 545
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q + S + R +R V + S + ++EP Y P+ LDF
Sbjct: 546 SRGQQVKFISQIFRKARTEQLVIPNLSKQDDGDYEGA----TVIEPIRGYYDVPVATLDF 601
Query: 583 QSLYPSVIIAYNYCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
SLYPS+I A+N C++T L +VEH +LKK ++ ++P+G
Sbjct: 602 ASLYPSIIQAHNLCYTTLLNKHKVEHF------------------NLKK-DEDYIVTPNG 642
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F +R G+L ++L+E+L R K+ +
Sbjct: 643 DMFCTTKVRKGLLSQILEELLGARKRAKKEL 673
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG--RVEHLGV 147
Y P+ LDF SLYPS+I A+N C++T L +VEH +
Sbjct: 592 YDVPVATLDFASLYPSIIQAHNLCYTTLLNKHKVEHFNL 630
>gi|150866455|ref|XP_001386065.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
gi|149387711|gb|ABN68036.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
Length = 1070
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 43/318 (13%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV---------KN 420
D D++IGY YLL+R LGL SR+ + ++D V +N
Sbjct: 354 DADVIIGYNTANFDIPYLLDRAKALGLRNFPFFSRLKN--SKQEAKDSVFSSRAYGTREN 411
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT----CWWEHRT 476
+ + GR+ ++L + ++ E L+SYT ++ H L E+ ++T E R
Sbjct: 412 KVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQKEDVQHSIITDLQNGTSETRR 471
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
L + + YL +RL+++L + +EMAR+ G+ F +L+RG Q +V S + R
Sbjct: 472 RLAVYCLKDAYLP-----LRLLDKLMCLVNYTEMARVTGVPFSYLLARGQQIKVISQLFR 526
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
+ V P++K E +I EP Y PI LDF SLYPS+++A+N C
Sbjct: 527 KCLEEDIVI--PNMKSEGTNEEYEGATVI-EPSRGYYDVPIATLDFSSLYPSIMMAHNLC 583
Query: 597 FSTCLGRVEHLGVSDSFPFGCIDLNV-SIRSLKKLQQNLTISPSGVAFVDKSIRCGILPK 655
++T LN+ +I++ + + T +P+G FV + GILP
Sbjct: 584 YTTL-------------------LNIQTIKAFNLTEDDYTRTPNGDYFVKDHKKQGILPT 624
Query: 656 MLQEILDTRLMVKQSMKE 673
+L E+L R K +K+
Sbjct: 625 ILNELLTARKKAKADLKK 642
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTD-PIIVLDFQSLYPSVII 129
S L R +D P K++ T ++ S R Y D PI LDF SLYPS+++
Sbjct: 522 SQLFRKCLEEDIVIPNMKSEGTNEEYEGATVIEPS---RGYYDVPIATLDFSSLYPSIMM 578
Query: 130 AYNYCFSTCL 139
A+N C++T L
Sbjct: 579 AHNLCYTTLL 588
>gi|402223554|gb|EJU03618.1| hypothetical protein DACRYDRAFT_93925 [Dacryopinax sp. DJM-731 SS1]
Length = 1097
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 187/400 (46%), Gaps = 60/400 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ N V+ + E S FI N+ + ++G ++ F
Sbjct: 311 GRKGIFPEPQIDPVIQIGNMVTRQGE-SSPFIRNIFTLNTCANIVGSQVLEFE------- 362
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---- 405
E +L S + + V + DPD+++GY I YLL+R L N LSRI
Sbjct: 363 ----KEADLLSKWKDFVEEVDPDMIVGYNIANFDLPYLLDRASALKCNKFPYLSRIKNQK 418
Query: 406 TEVE------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
T+++ K +RD + + M GR+ +++ ++++ + L+SYT + L E+
Sbjct: 419 TQIKEAHFSSKAYGTRD---SKETPMEGRLQLDMLQVMQRDYKLRSYTLNAVCAEFLGEQ 475
Query: 460 IP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS +L E R L + + YL + RL+++L +EMAR+ G
Sbjct: 476 KEEVHHSIITELQNGTAESRRRLAVYCLKDSYLPQ-----RLMDKLMSFVNYTEMARVTG 530
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +L RG Q +V S + R + + ++ P++K ++EPE Y
Sbjct: 531 VPFNYLLQRGQQIKVISQLYRKANDDGYLV--PAVKSEGSDEVQYEGATVIEPEKGYYDV 588
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L + ++ L + + +
Sbjct: 589 PIATLDFSSLYPSIMMAHNLCYTTLLTKETIDRLNLVEGVDY------------------ 630
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV + R G+LP +L++++ R K +K+
Sbjct: 631 -VKTPNHDYFVTPTRRKGLLPTVLEDLITARKRAKADLKK 669
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 586 YDVPIATLDFSSLYPSIMMAHNLCYTTLLTK 616
>gi|303390605|ref|XP_003073533.1| DNA polymerase catalytic subunit delta [Encephalitozoon
intestinalis ATCC 50506]
gi|303302680|gb|ADM12173.1| DNA polymerase catalytic subunit delta [Encephalitozoon
intestinalis ATCC 50506]
Length = 959
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 160/328 (48%), Gaps = 47/328 (14%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H+ EKEL + + + DPDI+IGY ++ Y+L RG VLG+ + S + +
Sbjct: 237 HWYETEKELLESWKKYFMELDPDIIIGYNVKGFDLPYILGRGEVLGI---ENFSILGRSK 293
Query: 410 KRNSSRD---------EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER- 459
K+ +RD + T++++ GR++I++ ++R + L+SY+ ++ H L E+
Sbjct: 294 KKARTRDTTMSSNMFGSIMTTEVEIEGRLIIDMMVVIRRDFKLRSYSLNSVSIHFLKEQK 353
Query: 460 --IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI 516
+P S L + + Y +R T + +RL +L+ + +E++R+ G+
Sbjct: 354 EDVPYSSIGELQSKDKDTRR-----RIASYCLRDTVLPLRLFSKLNVLINYAELSRVTGV 408
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+RG+ ++ +++ R + FV P + E ++EP+ Y P
Sbjct: 409 PIEYFFTRGTAIKIFALIYRTASKEGFVV--PETDPFESGKKYEG-GFVIEPKKGFYGKP 465
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I V+DF SLYPS++I++N C++T L + ++ R L ++
Sbjct: 466 ISVMDFTSLYPSIMISHNLCYTTLLTKDQY------------------RILGGIR----- 502
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTR 664
+P+ F + G+LP++L ++LD+R
Sbjct: 503 TPTDNYFCSPERKKGLLPRILVDLLDSR 530
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
+ Y PI V+DF SLYPS++I++N C++T L + ++
Sbjct: 458 KKGFYGKPISVMDFTSLYPSIMISHNLCYTTLLTKDQY 495
>gi|85014201|ref|XP_955596.1| DNA polymerase delta catalytic subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171290|emb|CAD27015.1| DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|449329935|gb|AGE96202.1| DNA polymerase delta catalytic large chain [Encephalitozoon
cuniculi]
Length = 974
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 162/341 (47%), Gaps = 47/341 (13%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H+ EKEL + + + DPD+++GY ++ Y+L RG +LG+ + S +
Sbjct: 252 HWYETEKELLESWKKYFMELDPDVIVGYNVKGFDIPYILSRGEILGI---ESFSVLGRSR 308
Query: 410 KRNSSRD---------EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER- 459
K+ +RD + T++++ GR++I++ ++R + L+SY+ ++ H L E+
Sbjct: 309 KKARTRDTTMSSNMFGSITTTEVEIDGRLIIDMMVVIRRDFKLRSYSLNSVSIHFLKEQK 368
Query: 460 --IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI 516
+P S L + + Y +R T + +RL L+ + +E++R+ G
Sbjct: 369 EDVPYSSIGELQSKNKDTRR-----RIASYCLRDTVLPLRLFNTLNVLINYTELSRVTGT 423
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+RG ++ +++ R + +F+ P I + E ++EP Y P
Sbjct: 424 PIEYFFTRGMAIKIFTLVYRAASKEDFMI--PDIDPFESNKTFEG-GFVIEPRKGFYNKP 480
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
+ V+DF SLYPS++I++N C++T L + ++ + T
Sbjct: 481 VSVMDFSSLYPSIMISHNLCYTTLLTKEQYRILGG-----------------------TK 517
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFS 677
+P+G F + G+LP++L ++L +R +K+ ++ K S
Sbjct: 518 TPTGNYFCSAERKKGLLPRILTDLLTSRKRIKEELEREKDS 558
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 68 FEESSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSV 127
+ +S E M PD P NK+ F + R Y P+ V+DF SLYPS+
Sbjct: 442 YRAASKEDFMIPD--IDPFESNKTFEGGFVIE------PRKGFYNKPVSVMDFSSLYPSI 493
Query: 128 IIAYNYCFSTCLGRVEH--LGVSDSFPFG---CIASRESNQSP 165
+I++N C++T L + ++ LG + + P G C A R+ P
Sbjct: 494 MISHNLCYTTLLTKEQYRILGGTKT-PTGNYFCSAERKKGLLP 535
>gi|387593494|gb|EIJ88518.1| hypothetical protein NEQG_01208 [Nematocida parisii ERTm3]
Length = 620
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 175/397 (44%), Gaps = 76/397 (19%)
Query: 327 QWDPDILIGYEIETFSWGYLLERHFVS----------------NEKELFSIFIENVRQWD 370
Q DP + IG + + ++E+ +EKE+ + + + V +
Sbjct: 203 QHDPVVQIGNAVAVYPSPVIIEKVLFCTRPTNPIPGVTIFSFMDEKEMLTAWSQWVSALN 262
Query: 371 PDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE-------------------VEKR 411
PD+L GY I YLL R LGL + SR E + +
Sbjct: 263 PDVLTGYNITQFDMPYLLNRAKALGLTKFKYFSRTDEPAETTQGLFKQDSNNSNKNGDAK 322
Query: 412 NSSRDEVKN-----TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
NS+ +E K+ L +PGR+V ++ +++ E L SY+ + L E+ +
Sbjct: 323 NSTSNEQKSGFTAPALLVVPGRLVFDMLDIVKKEFKLHSYSLNAVSSVFLGEQKEDVHYT 382
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
+ + K + V Y ++ T + IR++ + E+AR+ G+ +++RG
Sbjct: 383 QIKPLYNGTDETRKRLGV--YCLKDTYLPIRIMYTKNLFINYCELARVTGVPVEFLVNRG 440
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDFQ 583
RV S +LR ++ N++ P I + A E+ ++EP Y++P++VLD+
Sbjct: 441 QGIRVLSQLLRQAKKYNYIL--PVI-----IGAEETYEGGYVMEPNRGFYSNPVVVLDYA 493
Query: 584 SLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I+AYN C++T L + V H+ D T SP+G
Sbjct: 494 SLYPSIIMAYNLCYTTLLSKEQVAHMDKDD----------------------YTESPTGD 531
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSE 678
F+ + + G+LP +L +L+ R V+ +K K E
Sbjct: 532 YFLRREKKPGLLPVILTSLLEGRKAVRAELKNTKDPE 568
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
Y++P++VLD+ SLYPS+I+AYN C++T L + V H+ D
Sbjct: 482 FYSNPVVVLDYASLYPSIIMAYNLCYTTLLSKEQVAHMDKDD 523
>gi|340522830|gb|EGR53063.1| DNA polymerase delta, catalytic subunit [Trichoderma reesei QM6a]
Length = 1105
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 40/317 (12%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEKRNSSRDEVKNTQLQM 425
DPDI+IGY I + YLL+R L + + SRI + V++ N S ++ N +
Sbjct: 385 DPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSRIPSKPSRVKETNFSSKQIGNRDTKA 444
Query: 426 P---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRTHL 478
GR+ +++ +L++ + +L+SYT ++ L E+ ++T + E R L
Sbjct: 445 TNTNGRLQLDMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTPESRRRL 504
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R +
Sbjct: 505 ALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKA 559
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
V P+I + E +I EP Y PI LDF SLYPS+I A+N C++
Sbjct: 560 LEQKLVI--PNIAPQGSEDQYEGATVI-EPTRGYYDVPIATLDFASLYPSIIQAHNLCYT 616
Query: 599 TCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
T L G VE LKK ++ ++P+G FV + R G+L ++
Sbjct: 617 TLLRPGDVERF------------------KLKK-DEDYIVTPNGDMFVTATKRKGLLAQI 657
Query: 657 LQEILDTRLMVKQSMKE 673
L+E+L R K+ + +
Sbjct: 658 LEELLSARKQAKRELAQ 674
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+I A+N C++T L G VE
Sbjct: 591 YDVPIATLDFASLYPSIIQAHNLCYTTLLRPGDVERF 627
>gi|412988964|emb|CCO15555.1| DNA polymerase delta catalytic subunit [Bathycoccus prasinos]
Length = 1114
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 192/412 (46%), Gaps = 68/412 (16%)
Query: 287 VGIILIGQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDI---LIGYEIETFS 342
V I G++ P+ P IQ+ + E+ S I+ + W D ++G E+++F
Sbjct: 318 VDIECAGRKGFFPDAEQDPVIQIATLVTEQGSDSPIIKAI--WTLDTCAPIVGAEVKSFR 375
Query: 343 WGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----- 397
+E+EL + + +R DPD+LIGY I + YL++R LG+
Sbjct: 376 -----------DERELLRDWGKFMRAVDPDMLIGYNIVNFDFPYLIKRAQTLGVQDFPYW 424
Query: 398 ---LNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYH 454
+ ++L+ I + + + ++ ++ + GR+ ++ + ++ + L SY+ ++ H
Sbjct: 425 GRIIGKQLT-IKDTTFSSKAYGTRESKEITIEGRVQFDMLQAIQRDYKLSSYSLNSVSAH 483
Query: 455 VLHERIP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
L E+ HS +L E R L + + YL + RL+++L + EM
Sbjct: 484 FLGEQKEDVHHSAISELQAGTAETRRRLAVYCLKDAYLPQ-----RLLDKLMYTYNYIEM 538
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL-------- 562
+R+ G+ +L+RG +V S +LR +R + P+ + R + P +
Sbjct: 539 SRVTGVPLSFLLARGQSIKVMSQLLRKARQRGLII--PARRDRGN--GPNAQLEGEVAYE 594
Query: 563 -PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLN 621
+L+ ++ Y PI LDF SLYPS+++A+N C+ T V+ V+D P
Sbjct: 595 GATVLDAKAGYYELPIATLDFASLYPSIMMAHNLCYCTL---VKQHDVADLPP------- 644
Query: 622 VSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ T +P+G FV + GILP++L+E+L R KQ +K+
Sbjct: 645 ----------EAYTKAPTGDVFVKSTQFKGILPEILEELLSARKRAKQDLKK 686
>gi|119175148|ref|XP_001239851.1| hypothetical protein CIMG_09472 [Coccidioides immitis RS]
gi|392870043|gb|EAS28595.2| DNA polymerase (pol2) [Coccidioides immitis RS]
Length = 1110
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 160/328 (48%), Gaps = 36/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV----EK 410
E+E+ + E + + DPD++IGY I + YLL+R L + SR+ V +
Sbjct: 376 EQEMLMAWREFLEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDFPYWSRLKNVVSQSKD 435
Query: 411 RNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GRI ++L +L++ + L++YT ++ H L E+ +
Sbjct: 436 TNFSSKQMGNRDTKATNTNGRIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTM 495
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + + R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 496 ITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLS 550
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + + V P++K + +I EP Y PI LDF
Sbjct: 551 RGQQVKFISQLFRKALEQDLVI--PNLKNENGEEQYKGATVI-EPVKDYYDVPIATLDFA 607
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+I A+N C++T L + +V +LKK ++ ++P+G F
Sbjct: 608 SLYPSIIQAHNLCYTTLLNKT----------------SVEKLNLKK-DEDYIVTPNGDMF 650
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++LQE+L R K+ +
Sbjct: 651 CTSKVRKGLLSQILQELLSARKRAKKEL 678
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE L +
Sbjct: 597 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKTSVEKLNL 635
>gi|425777959|gb|EKV16108.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425780068|gb|EKV18089.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1104
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 180/394 (45%), Gaps = 54/394 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V FI NV D +++ +I F
Sbjct: 316 GRKGIFPEPNMDPVIQIANVVTRYGETKPFIRNVFVLDTCSLIVNTQILEFE-------- 367
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----T 406
E+++ + + + V + DPD++IGY I + YLL+R L +R+ T
Sbjct: 368 ---KEEKMLNAWRDFVEKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLKGFKT 424
Query: 407 EVEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
E + N S ++ N + GRI ++L +L++ + L+SYT ++ Y L E+
Sbjct: 425 EAKDANFSSKQMGNRDTKATNTNGRIQLDLLQLVQRDHQLRSYTLNSVSYEFLKEQKEDV 484
Query: 464 SWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 485 HHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFN 539
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q + S + R +R V + + ++EP+ Y P+
Sbjct: 540 FLLSRGQQVKFISQLFRKAREQQLVIPNSKPQDEQDYEGA----TVIEPKRGYYGVPVAT 595
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+I A+N C++T L + VE L +LKK + ++
Sbjct: 596 LDFASLYPSIIQAHNLCYTTLLNKSSVEKL------------------NLKK-DDDYIVT 636
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G F +R G+L ++L+E+L R K+ +
Sbjct: 637 PNGDMFCTTKVRKGLLSQILEELLSARKRAKREL 670
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y P+ LDF SLYPS+I A+N C++T L + VE L +
Sbjct: 589 YGVPVATLDFASLYPSIIQAHNLCYTTLLNKSSVEKLNL 627
>gi|320037710|gb|EFW19647.1| DNA polymerase delta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1110
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 159/329 (48%), Gaps = 38/329 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV----EK 410
E+E+ + + + + DPD++IGY I + YLL+R L + SR+ V +
Sbjct: 376 EQEMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDFPYWSRLKNVVSQSKD 435
Query: 411 RNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GRI ++L +L++ + L++YT ++ H L E+ +
Sbjct: 436 TNFSSKQMGNRDTKATNTNGRIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTM 495
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + + R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 496 ITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLS 550
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + + V P++K + +I EP Y PI LDF
Sbjct: 551 RGQQVKFISQLFRKALEQDLVI--PNLKNENGEEQYKGATVI-EPVKDYYDVPIATLDFA 607
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGVA 642
SLYPS+I A+N C++T L + S+ LK K ++ ++P+G
Sbjct: 608 SLYPSIIQAHNLCYTTLLNK------------------TSVEKLKLKKDEDYIVTPNGDM 649
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F +R G+L ++LQE+L R K+ +
Sbjct: 650 FCTSKVRKGLLSQILQELLSARKRAKKEL 678
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 597 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 628
>gi|303314745|ref|XP_003067381.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107049|gb|EER25236.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1110
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 159/329 (48%), Gaps = 38/329 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV----EK 410
E+E+ + + + + DPD++IGY I + YLL+R L + SR+ V +
Sbjct: 376 EQEMLMAWRDFLEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDFPYWSRLKNVVSQSKD 435
Query: 411 RNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GRI ++L +L++ + L++YT ++ H L E+ +
Sbjct: 436 TNFSSKQMGNRDTKATNTNGRIQLDLLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTM 495
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + + R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 496 ITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLS 550
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + + V P++K + +I EP Y PI LDF
Sbjct: 551 RGQQVKFISQLFRKALEQDLVI--PNLKNENGEEQYKGATVI-EPVKDYYDVPIATLDFA 607
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGVA 642
SLYPS+I A+N C++T L + S+ LK K ++ ++P+G
Sbjct: 608 SLYPSIIQAHNLCYTTLLNK------------------TSVEKLKLKKDEDYIVTPNGDM 649
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSM 671
F +R G+L ++LQE+L R K+ +
Sbjct: 650 FCTSKVRKGLLSQILQELLSARKRAKKEL 678
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 597 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 628
>gi|403171115|ref|XP_003330341.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169039|gb|EFP85922.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1055
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 160/333 (48%), Gaps = 42/333 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVE 409
+E +L + + V + DPD++IGY YLL+R L + L R+ T V+
Sbjct: 333 SEDQLLAKWQAFVAECDPDLVIGYNTSNFDMPYLLDRAKALKVASFPYLGRMRNSQTAVK 392
Query: 410 ------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
K +RD K T L GR+ ++L ++++ + L+SYT ++ H L E+
Sbjct: 393 ETHFSSKAYGTRDS-KETHLD--GRLQLDLLQVMQRDYKLRSYTLNSVCAHFLGEQKEDV 449
Query: 464 SWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T E R L + + YL + RL+++L +EMAR+ G+ F
Sbjct: 450 HHSIITDLQNGSAETRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVPFN 504
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S + R R N + P++K P ++EP Y PI
Sbjct: 505 YLLSRGQQIKVVSQLYR--RANEHSYLVPALKHEGS-DEPYDGATVMEPVRGFYDVPIAT 561
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T ++D+ ++L + ++ I+P+
Sbjct: 562 LDFASLYPSIMMAHNLCYTT---------LTDAKTVKLLEL--------RQDEDFIITPN 604
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G FV S R G+L +L+++L R + +K
Sbjct: 605 GDYFVKASKRKGLLAIVLEDLLSARKRARAELK 637
>gi|358389733|gb|EHK27325.1| hypothetical protein TRIVIDRAFT_33534 [Trichoderma virens Gv29-8]
Length = 1105
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 40/317 (12%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEKRNSSRDEVKNTQLQM 425
DPDI+IGY I + YLL+R L + + SRI ++V++ N S ++ N +
Sbjct: 385 DPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSRIPSKPSKVKETNFSSKQIGNRDTKT 444
Query: 426 P---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRTHL 478
GR+ +++ +L++ + +L+SYT ++ L E+ ++T + E R L
Sbjct: 445 TNTNGRLQLDMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTPESRRRL 504
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R +
Sbjct: 505 ALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKA 559
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
V P+I + E +I EP Y PI LDF SLYPS+I A+N C++
Sbjct: 560 LEQKLVI--PNIAPQGTEDQYEGATVI-EPTRGYYDVPIATLDFASLYPSIIQAHNLCYT 616
Query: 599 TCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
T L G VE + + ++P+G +FV + R G+L ++
Sbjct: 617 TLLRPGDVERFKLEKDVDY-------------------IVTPNGDSFVTATKRKGLLAQI 657
Query: 657 LQEILDTRLMVKQSMKE 673
L+E+L R K+ + +
Sbjct: 658 LEELLSARKQAKRELAQ 674
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+I A+N C++T L G VE
Sbjct: 591 YDVPIATLDFASLYPSIIQAHNLCYTTLLRPGDVERF 627
>gi|145251457|ref|XP_001397242.1| DNA polymerase delta catalytic subunit [Aspergillus niger CBS
513.88]
gi|134082776|emb|CAK48550.1| unnamed protein product [Aspergillus niger]
gi|350636552|gb|EHA24912.1| hypothetical protein ASPNIDRAFT_210383 [Aspergillus niger ATCC
1015]
Length = 1105
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 180/395 (45%), Gaps = 56/395 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V FI NV D +++ +I F
Sbjct: 319 GRKGIFPEPNQDPVIQIANVVTRYGESKPFIRNVFVLDTCSLIVNTQILEFK-------- 370
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQE 401
+E ++ + + V++ DPD++IGY I + YLL+R Y LN Q
Sbjct: 371 ---DEGKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLNGVQS 427
Query: 402 LSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
S+ T + + K+T GRI +++ +L++ + +L+SYT ++ Y L E+
Sbjct: 428 QSKETNFSSKQMGNRDTKSTNTN--GRIQLDMLQLVQRDYHLRSYTLNSVSYEFLGEQKE 485
Query: 462 LHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
++T + + R L + + YL + RL+++L + +EMAR+ G+
Sbjct: 486 DVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVP 540
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
F +LSRG Q + S + R + V P+ K + ++EP Y PI
Sbjct: 541 FNFLLSRGQQVKFISQLFRKALEQQLVI--PNTKSNDEQDYEGAT--VIEPVRGYYGVPI 596
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTI 636
LDF SLYPS+I A+N C++T L + S+ LK ++ ++ +
Sbjct: 597 ATLDFASLYPSIIQAHNLCYTTLLNK------------------SSVERLKLVKDEDYIV 638
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+P+G F +R G+L ++L+E+L R K+ +
Sbjct: 639 TPNGDMFCTAKVRKGLLSQILEELLSARKRAKKEL 673
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y PI LDF SLYPS+I A+N C++T L + VE L
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKSSVERL 628
>gi|50293371|ref|XP_449097.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528410|emb|CAG62067.1| unnamed protein product [Candida glabrata]
Length = 1096
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 42/333 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSR 404
E++L + + + Q DPD++IGY YLL R L + N+ QE+
Sbjct: 378 EEDLLRKWRDFIIQVDPDVIIGYNTTNFDIPYLLNRAKALKIENFPYFGRLKNVKQEIKE 437
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
K +R E KN + GR+ ++L + ++ E L+SYT + + L E+
Sbjct: 438 SIFSSKAYGTR-ETKNVNID--GRLQLDLLQFVQREYKLRSYTLNAVSANFLGEQKEDVH 494
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T E R L + + YL +RL+E+L + +EMAR+ GI F
Sbjct: 495 HSIITDLQNGDRETRRRLAVYCLKDAYLP-----LRLLEKLMALVNYTEMARVTGIPFSY 549
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L+RG Q +V S + R + V P++ E +I EP Y PI L
Sbjct: 550 LLARGQQIKVVSQLFR--KCLEIDTVIPNMHSHGSDEQYEGATVI-EPIRGYYDVPIATL 606
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSG 640
DF SLYPS+++A+N C++T C V +LKK +++ I+P+G
Sbjct: 607 DFNSLYPSIMMAHNLCYTTL----------------CNKATVDRLNLKK-EEDYIITPNG 649
Query: 641 VAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV R GILP +L E++ R K+ +++
Sbjct: 650 DYFVTTKKRRGILPIILDELISARKRAKKDLRD 682
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 599 YDVPIATLDFNSLYPSIMMAHNLCYTT 625
>gi|308504541|ref|XP_003114454.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
gi|308261839|gb|EFP05792.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
Length = 1080
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 157/339 (46%), Gaps = 53/339 (15%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NEK L + E VR+ DPDI+ GY I Y+L+R VL L L R + +K +
Sbjct: 343 NEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGR--QKDKGSV 400
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER----- 459
RD N + + GRI+ ++ +++ + L+SYT ++ Y L E+
Sbjct: 401 VRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQKEDVE 460
Query: 460 ---IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
IP L + R L ++ + YL +RL+++L I EMAR+ G
Sbjct: 461 HNIIP----DLQRGDEQTRRRLAQYCLKDAYLP-----LRLLDKLMSIINYIEMARVTGF 511
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
L + S ++ S+MLR + NNF P I+ + +++P Y +P
Sbjct: 512 IMPMNLYK-SWLQILSMMLRRCKQNNFFL--PVIEVNSGDGEGYEGATVIDPIRGFYNEP 568
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS++IA+N C++T L + GV + ++
Sbjct: 569 IATLDFASLYPSIMIAHNLCYTTLLKSPQ--GVEN--------------------EDYIR 606
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+PSG F KS R G+LP++L+++L R K MK K
Sbjct: 607 TPSGQYFATKSKRHGLLPEILEDLLVARKRAKNFMKNEK 645
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 94 SSFDSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+S D + + ++ D + Y +PI LDF SLYPS++IA+N C++T L
Sbjct: 545 NSGDGEGYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLL 593
>gi|353237606|emb|CCA69575.1| probable DNA polymerase delta catalytic subunit [Piriformospora
indica DSM 11827]
Length = 1069
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 188/401 (46%), Gaps = 63/401 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERH 350
G++ P+ + P IQ+ N V+ + E FI NV + + +++
Sbjct: 292 GRKGTFPDAKIDPVIQIANMVTRQGE-SKPFIRNVFTLN------------TCAHIVGSQ 338
Query: 351 FVSNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
+S++ E + + + V++ DPDI+IGY I + YL++R L + L R+T
Sbjct: 339 VISHQHEGNMLQAWSDFVKRVDPDIIIGYNIANFDFPYLMDRAEALKVKEFPYLGRLTHS 398
Query: 409 E----------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
+ K +RD K T L+ GR+ +++ ++++ + L+SY+ ++ H L E
Sbjct: 399 KTYVRTTHFSSKAYGTRDS-KETVLE--GRLQLDIIQVMQRDYKLRSYSLNSVCAHFLGE 455
Query: 459 RIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ ++T E R L + + YL + RL+++L +EMAR+
Sbjct: 456 QKEDVHHSVITDLQNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYTEMARVT 510
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
GI F +LSRG +V S + R R N+ + P+ K E +I EP Y
Sbjct: 511 GIPFNYLLSRGQSIKVVSQLYR--RANSEGYLIPATKSEGGEDQYEGATVI-EPSRGFYK 567
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
PI LDF SLYPS+++A+N C++T L + ++ LG+ IR + +Q
Sbjct: 568 KPIATLDFSSLYPSIMMAHNLCYTTLLNKDTIDRLGL--------------IRDVDYIQ- 612
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ F R G+LP +L++++ R K +K+
Sbjct: 613 ----TPNKDFFATTKRRKGLLPTVLEDLIAARKRAKADLKK 649
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 91 STRSSFDSDMFPSSS----SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEH 144
+T+S D + ++ SR Y PI LDF SLYPS+++A+N C++T L + ++
Sbjct: 543 ATKSEGGEDQYEGATVIEPSRG-FYKKPIATLDFSSLYPSIMMAHNLCYTTLLNKDTIDR 601
Query: 145 LGV 147
LG+
Sbjct: 602 LGL 604
>gi|1840091|gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus]
Length = 1102
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 316 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 367
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + D D++ GY I+ YL+ R L ++ L R+T +
Sbjct: 368 -----REEDLLQAWPNFILAMDSDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 422
Query: 409 EKRNSSRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD ++ + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 423 --RSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGEQ 480
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y +R + +RL+E+L + EMAR+ G+
Sbjct: 481 KEDVQHSIITDLQNGNEQTRRRLAV--YCLRDAFLPLRLLERLMVLVNNVEMARVTGVPL 538
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q +V S +LR + + P +K + ++EP Y PI
Sbjct: 539 GYLLSRGQQVKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIA 594
Query: 579 VLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 595 TLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------I 633
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+G FV S+R G+LP++L+ +L R K + +
Sbjct: 634 KTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ 671
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 589 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 632
>gi|449547887|gb|EMD38854.1| hypothetical protein CERSUDRAFT_112578 [Ceriporiopsis subvermispora
B]
Length = 1085
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 183/397 (46%), Gaps = 55/397 (13%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E FI N+ + ++G ++ ++S
Sbjct: 300 GRKGIFPEANIDPVIQIANMVTRQGE-SKPFIRNIFTLNTCAHIVGSQVLSYS------- 351
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---- 405
+E E+ + V Q DPD++ GY + YLL+R L + L R+
Sbjct: 352 ----DESEMLLAWRAFVEQVDPDVITGYNMANFDIPYLLDRAKALKTDRFPMLGRMINMK 407
Query: 406 -----TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
T + + + K+T L GR+ I++ + ++ E L+SYT ++ L E+
Sbjct: 408 AATKETHFSSKAFGQRDSKDTALD--GRLQIDMLQYMQREHKLRSYTLNSVCAQFLGEQK 465
Query: 461 P--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS +L E R L + + YL + RL+++L +EMAR+ G+
Sbjct: 466 EDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYTEMARVTGV 520
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LSRG +V S + R R N + PS+K E +I EP+ Y P
Sbjct: 521 PFNYLLSRGQSIKVLSQLFR--RANEEGYLIPSLKGEGSDEQYEGATVI-EPKKGYYDVP 577
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS+++A+N C++T L + ID ++ + +Q
Sbjct: 578 IATLDFSSLYPSIMMAHNLCYTTLLDK------------NTIDRMNLVKDIDYIQ----- 620
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ FV + R G+LP +L++++ TR K +K+
Sbjct: 621 TPNNDFFVKSTKRKGLLPTILEDLISTRKRAKADLKK 657
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 574 YDVPIATLDFSSLYPSIMMAHNLCYTTLLDK 604
>gi|300707422|ref|XP_002995919.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
gi|239605160|gb|EEQ82248.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
Length = 977
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 169/346 (48%), Gaps = 48/346 (13%)
Query: 339 ETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNL 398
ET + + R F + +K+L + E +PD+++GY ++ Y+LERG L +
Sbjct: 244 ETAAIPGAIVRSF-NTKKDLLIAWKEYFIDQNPDLILGYNLKGFDIPYILERGTTLNI-- 300
Query: 399 NQELSRITEVEKRNSSRDEVKNT---------QLQMPGRIVINLWRLLRHEVNLQSYTFE 449
++ +++ +K ++D V ++ ++ + GRIV +L +++R E L+SY+
Sbjct: 301 -EDFNKLGRTQKPCKAKDAVFSSRQVGSLSTPEITIEGRIVFDLMQIIRREHKLRSYSLN 359
Query: 450 NIMYHVLHER---IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIG 505
++ H L E+ +P +S L E K + Y ++ T + +RL +L+ +
Sbjct: 360 SVSLHFLQEQKEDVPHNSMHDL---QEGNKDTRK--RIASYCLKDTILPLRLFNKLNILI 414
Query: 506 RTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLI 565
+E+AR+ G+ SRG +V +++ R + N+++ P + + E +
Sbjct: 415 NYTELARVMGVPLEYFSSRGVGIKVLTLIYRAAAENDYLI--PVLDVEDNDSTYEG-GFV 471
Query: 566 LEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIR 625
++P Y PI VLDF SLYPS++I+ N C+ST L + ++ D F
Sbjct: 472 MDPMRGFYPQPIAVLDFSSLYPSIMISRNLCYSTLLTKEQY----DKF------------ 515
Query: 626 SLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
T +P+ FVD ++ G+LPK+L +L +R K+ M
Sbjct: 516 -------GGTKTPTNNYFVDSKVKQGLLPKVLINLLASRKATKKEM 554
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
Y PI VLDF SLYPS++I+ N C+ST L + ++
Sbjct: 478 FYPQPIAVLDFSSLYPSIMISRNLCYSTLLTKEQY 512
>gi|401828411|ref|XP_003887919.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon
hellem ATCC 50504]
gi|392998927|gb|AFM98938.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon
hellem ATCC 50504]
Length = 974
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 161/328 (49%), Gaps = 47/328 (14%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
H+ EK L + + + DPDI++GY I+ Y+L+RG +LG+N + S + +
Sbjct: 252 HWYDTEKGLLESWKKYFMEVDPDIIVGYNIKGFDLPYILDRGEILGIN---DFSILGRSK 308
Query: 410 KRNSSRD---------EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER- 459
K+ +RD + T++++ GR++I++ ++R + L+SY+ ++ H L E+
Sbjct: 309 KKAKTRDTTMSSNMFGSITTTEVEIDGRLIIDMMVVIRRDYKLRSYSLNSVSIHFLKEQK 368
Query: 460 --IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGI 516
+P S L + + Y +R T + +RL L + +E++R+ G+
Sbjct: 369 EDVPPSSIGELQSKDKDSRR-----RIASYCLRDTVLPLRLFSTLSVLINYTELSRVTGV 423
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
+RG+ ++ +++ R++ +FV P + R E ++EP+ Y P
Sbjct: 424 PIDYFFTRGTAIKMFALIYRVAAKEDFVV--PEVDPFESNRTFEG-GFVIEPKRGFYNKP 480
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
+ V+DF SLYPS++I+ N C++T L + ++ R L ++
Sbjct: 481 VSVMDFTSLYPSIMISNNLCYTTLLTKEQY------------------RVLGGIR----- 517
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTR 664
+P+ F + G+LP++L ++L++R
Sbjct: 518 TPTDNYFCSAERKKGLLPRILVDLLESR 545
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
Y P+ V+DF SLYPS++I+ N C++T L + ++
Sbjct: 476 FYNKPVSVMDFTSLYPSIMISNNLCYTTLLTKEQY 510
>gi|406701433|gb|EKD04579.1| hypothetical protein A1Q2_01151 [Trichosporon asahii var. asahii
CBS 8904]
Length = 912
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 180/384 (46%), Gaps = 44/384 (11%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + F+ NV + ++G +++ F
Sbjct: 265 GRKGIFPEANIDPVIQIAAMVTRHGEKKPFVRNVFTLNTCAHIVGAQVKQFM-------- 316
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E++L + + V++ DPD++IGY I YLL+R L + L R+ +
Sbjct: 317 ---DERQLLLAWRDFVQEVDPDLVIGYNISNFDLPYLLDRAKALKIPDFSYLGRLEDTHF 373
Query: 411 RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ + + + + + GR+ +++ ++++ + L+SYT + L E+ ++T
Sbjct: 374 SSKAFGQRDSKAVNLDGRLQMDILQVIQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE 433
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ + V Y ++ RL+++L + +E+AR+ GI F +VL+RG Q RV
Sbjct: 434 LQNGTADSRRRLAV--YCLK-----RLLDRLMCLVNYTELARVTGIPFNDVLTRGQQIRV 486
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S + R ++ ++ P+++ E +I EP Y PI LDF SLYPS++
Sbjct: 487 ISQLYRNAKDKGYLI--PAMRSEGTDEQYEGATVI-EPSKGYYDTPIATLDFASLYPSIM 543
Query: 591 IAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+A+N C++T + + ++ LG+ ++ ++ +P+ F+ +
Sbjct: 544 MAHNLCYTTLVDKATIQRLGLVEN-------------------EDYVQTPNNDFFMTEKR 584
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP +L+ +L R K +K
Sbjct: 585 RKGLLPHVLENLLGARKRAKADLK 608
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + + ++ LG+
Sbjct: 526 YDTPIATLDFASLYPSIMMAHNLCYTTLVDKATIQRLGL 564
>gi|430812887|emb|CCJ29720.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1088
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 161/334 (48%), Gaps = 44/334 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--TEVEKR 411
++KEL + + V++ DPD++IGY I YL++R L +N RI + E
Sbjct: 359 DQKELLLSWSKFVQKADPDVIIGYNIANFDIPYLIDRAKHLKINNFPYFGRIIRQKCEVS 418
Query: 412 NSS-------RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
N+S E K+T + GR+ +++ ++++ + L+SYT + L+E+
Sbjct: 419 NASFSSKAYGTRESKSTDIS--GRLQLDMLQIMQRDYRLRSYTLNAVSAQFLNEQKEDVH 476
Query: 465 WKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T E R L + + +L + RL+++L + EM+R+ G+ F
Sbjct: 477 HSIITDLQNGTSESRRRLAVYCLKDAHLPQ-----RLMDKLMSLVNYIEMSRVTGVPFSY 531
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q ++ S + R +R F+ P+I+ E +I EP+ Y PI+ L
Sbjct: 532 LLSRGQQIKIISQLSRKAREEGFII--PNIRSDGSDEQYEGATVI-EPKKGYYNVPIVTL 588
Query: 581 DFQSLYPSVIIAYNYCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS++ A+N C++T L ++E LG ++ ++P
Sbjct: 589 DFSSLYPSIMQAHNLCYTTLLNYKQIETLGFEKD-------------------KDYCVTP 629
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV IR G+LP++ + +L R VK +K
Sbjct: 630 ENYCFVKSHIRKGLLPQIFENLLAARQKVKIDLK 663
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG--RVEHLG 146
Y PI+ LDF SLYPS++ A+N C++T L ++E LG
Sbjct: 581 YNVPIVTLDFSSLYPSIMQAHNLCYTTLLNYKQIETLG 618
>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
Length = 1105
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 159/332 (47%), Gaps = 43/332 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQELSR 404
+E ++ + + V++ DPD++IGY I + YLL+R Y LN Q S+
Sbjct: 371 DEAKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLNGVQSQSK 430
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
T + + K+T GRI +++ +L++ + +L+SYT ++ Y L E+
Sbjct: 431 ETNFSSKQMGNRDTKSTNTN--GRIQLDMLQLVQRDYHLRSYTLNSVSYEFLGEQKEDVH 488
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 489 HTMITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNF 543
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q + S + R + V P+ K + ++EP Y PI L
Sbjct: 544 LLSRGQQVKFISQLFRKALEQQLVI--PNTKSNDEQDYEGAT--VIEPVRGYYGVPIATL 599
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTISPS 639
DF SLYPS+I A+N C++T L + S+ LK ++ ++ ++P+
Sbjct: 600 DFASLYPSIIQAHNLCYTTLLNK------------------NSVERLKLVKDEDYIVTPN 641
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G F +R G+L ++L+E+L R K+ +
Sbjct: 642 GDMFCTAKVRKGLLSQILEELLSARKRAKKEL 673
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y PI LDF SLYPS+I A+N C++T L + VE L
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVERL 628
>gi|300122468|emb|CBK23038.2| unnamed protein product [Blastocystis hominis]
Length = 850
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 159/331 (48%), Gaps = 41/331 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQELSRIT 406
+EK++ + + + + D DI+ GY I+ YL +R L + + E +R T
Sbjct: 125 DEKDMLAAWSKYLVACDADIITGYNIQNFDIDYLRKRAATLKVKEFDLLGRVKGEFARCT 184
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL---HERIPLH 463
+++ +N + GR++ ++ + +R E L SYT N+ L E + +
Sbjct: 185 TSTFSSAAYGTHENIDTNIAGRLIFDVMQFVRREYKLSSYTLNNVSSEFLGQTKEDVKYN 244
Query: 464 SWKLLTCWWE-HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
K L + R + + + +L + +L+++L+ I EMAR+ G+ +L
Sbjct: 245 QIKELFNGDDVTRQRIASYCVKDAWLPQ-----QLLDKLNVIINQVEMARVTGVPINMLL 299
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q +V S++ R S ++ P++ R++ ++EP+ Y +PI LDF
Sbjct: 300 SRGQQIKVLSMIHRKSLQLGYII--PTL-DRSNQSEKYEGATVIEPKKGYYEEPIATLDF 356
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS++IA+N C+ST + DS ID + + SP+G
Sbjct: 357 ASLYPSIMIAHNICYSTL--------IPDSME---ID-----------ESRVERSPTGNR 394
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F+ KS R G+LP +L+E+L R + K+ M +
Sbjct: 395 FLKKSEREGVLPIILRELLAARKVAKKDMAK 425
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 83 PSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P+ R N+S + + + P Y +PI LDF SLYPS++IA+N C+ST
Sbjct: 323 PTLDRSNQSEKYEGATVIEPKKG----YYEEPIATLDFASLYPSIMIAHNICYST 373
>gi|328855214|gb|EGG04342.1| hypothetical protein MELLADRAFT_53062 [Melampsora larici-populina
98AG31]
Length = 1067
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 181/398 (45%), Gaps = 59/398 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDI-LIGYEIETFSWGYLLERH 350
G++ PE + P IQ+ + + FI NV D ++G ++ F
Sbjct: 282 GRKGIFPEAKIDPVIQIANLVTCHGSSTPFIRNVFTLDTCAHIVGSQVIEFK-------- 333
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE- 409
E+++ + + V + DPD++IGY YLL+R L +N +L R+ ++
Sbjct: 334 ---KEEDMLAKWQLFVEECDPDLVIGYNTTNFDMPYLLDRAKALKVNTFPQLGRMKNIQT 390
Query: 410 ---------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
K +RD K T L GR+ ++L ++++ + L+SYT + L E+
Sbjct: 391 VVKDTHFSSKAYGTRDS-KETHLD--GRLQLDLLQVMQRDYKLRSYTLNAVCAQFLGEQK 447
Query: 461 PLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
++T E R L + + YL + RL+++L +EMAR+ G+
Sbjct: 448 EDVHHTMITELQNGNSESRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGV 502
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LSRG Q +V S + R R F + P++K + ++++P Y P
Sbjct: 503 PFNYLLSRGQQIKVVSQLYR--RAGEFSYIVPAMKYEGSDDQFDG-AIVMDPIRGYYDVP 559
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS+++A+N C++T + LG+ ++ ++
Sbjct: 560 IATLDFASLYPSIMMAHNLCYTTLTDAKTAKQLGLVEN-------------------EDY 600
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
I+P+G FV S R G+L +L+++L R + +K
Sbjct: 601 IITPNGDYFVKTSKRKGLLAIVLEDLLSARKRARAELK 638
>gi|242817379|ref|XP_002486944.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713409|gb|EED12833.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1106
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 159/333 (47%), Gaps = 45/333 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQELSR 404
+E ++ + + +++ DPD++IGY I + YLL+R Y L N+ ++
Sbjct: 372 DEAKMLMAWQQFLQKVDPDVIIGYNIANFDFPYLLDRAKHLKCQSFPYFTRLIKNKSEAK 431
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
T + + K+T GRI ++L +L++ + +L+SYT ++ L E+
Sbjct: 432 ETNFSSKQMGNRDTKSTNTN--GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVH 489
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 490 HTIITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLINYAEMARVTGVPFNY 544
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q + S + R +R V + S + ++EP Y P+ L
Sbjct: 545 LLSRGQQVKFISQIFRKARTEQLVIPNLSKQDEGEYEGA----TVIEPVRGYYDVPVATL 600
Query: 581 DFQSLYPSVIIAYNYCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+I A+N C++T L +VEH +LKK ++ ++P
Sbjct: 601 DFASLYPSIIQAHNLCYTTLLNQKKVEHF------------------NLKK-DEDYIVTP 641
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 642 NGDMFCTTKVRKGLLSQILEELLSARKRAKREL 674
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG--RVEHLGV 147
Y P+ LDF SLYPS+I A+N C++T L +VEH +
Sbjct: 593 YDVPVATLDFASLYPSIIQAHNLCYTTLLNQKKVEHFNL 631
>gi|330793430|ref|XP_003284787.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
gi|325085281|gb|EGC38691.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
Length = 1026
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 184/396 (46%), Gaps = 51/396 (12%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ N V N+ E FI+N+ + ++ S ++ H
Sbjct: 247 GRKGFFPEPEKDPVIQIANIVKNQGE-SEPFIKNI----------FTLKGCS--SIVGAH 293
Query: 351 FVSN--EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-TE 407
+S+ EK++ + + + + DPDI+IGY I YL+ R L + LSRI T
Sbjct: 294 VISHKCEKDMLKEWRKFLIKVDPDIIIGYNIANFDLPYLISRARTLKIPEFALLSRIKTT 353
Query: 408 VEKRNSSRDEVKN------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+ K S+ N ++ MPGR +L + ++ + L SY+ N+ H L E+
Sbjct: 354 ISKIKSTHFSSSNLGTRESKEVSMPGRTQFDLMQAIQRDHKLSSYSLNNVSAHFLKEQKE 413
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIG-RTSEMARLFGIQFYE 520
+ +++ + + V Y I+ + + + +EMAR+ G+
Sbjct: 414 DVHFSIISDLQNGTDDDRRRLAV--YCIKDAALPMKLLDKLMLLINYTEMARVTGVPLSY 471
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+L RG +V S + R + + +F+ + + +A + ++ ++EP+ Y PI L
Sbjct: 472 LLGRGEGVKVLSQLYRKAMVEDFLIPTYKVTGKAGEKFKGAV--VIEPKCAFYDTPIATL 529
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN-LTISPS 639
DF SLYPS+++A+N C+ST L E KKL + T++PS
Sbjct: 530 DFTSLYPSIMMAHNLCYSTLLPAEEA---------------------KKLPADEYTVTPS 568
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
G F+ + G+LP++L+E+L R K+ +K K
Sbjct: 569 GDHFILPHKKKGLLPRILEELLSARKNAKELLKNEK 604
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C+ST L
Sbjct: 521 FYDTPIATLDFTSLYPSIMMAHNLCYSTLL 550
>gi|401882228|gb|EJT46496.1| hypothetical protein A1Q1_04928 [Trichosporon asahii var. asahii
CBS 2479]
Length = 912
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 180/384 (46%), Gaps = 44/384 (11%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + F+ NV + ++G +++ F
Sbjct: 265 GRKGIFPEANIDPVIQIAAMVMRHGEKKPFVRNVFTLNTCAHIVGAQVKQFM-------- 316
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E++L + + V++ DPD++IGY I YLL+R L + L R+ +
Sbjct: 317 ---DERQLLLAWRDFVQEVDPDLVIGYNISNFDLPYLLDRAKALKIPDFSYLGRLEDTHF 373
Query: 411 RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ + + + + + GR+ +++ ++++ + L+SYT + L E+ ++T
Sbjct: 374 SSKAFGQRDSKAVNLDGRLQMDILQVIQRDYKLRSYTLNAVCAQFLGEQKEDVHHSIITE 433
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ + V Y ++ RL+++L + +E+AR+ GI F +VL+RG Q RV
Sbjct: 434 LQNGTADSRRRLAV--YCLK-----RLLDRLMCLVNYTELARVTGIPFNDVLTRGQQIRV 486
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S + R ++ ++ P+++ E +I EP Y PI LDF SLYPS++
Sbjct: 487 ISQLYRNAKDKGYLI--PAMRSEGTDEQYEGATVI-EPSKGYYDTPIATLDFASLYPSIM 543
Query: 591 IAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
+A+N C++T + + ++ LG+ ++ ++ +P+ F+ +
Sbjct: 544 MAHNLCYTTLVDKATIQRLGLVEN-------------------EDYVQTPNNDFFMTEKR 584
Query: 649 RCGILPKMLQEILDTRLMVKQSMK 672
R G+LP +L+ +L R K +K
Sbjct: 585 RKGLLPHVLENLLGARKRAKADLK 608
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + + ++ LG+
Sbjct: 526 YDTPIATLDFASLYPSIMMAHNLCYTTLVDKATIQRLGL 564
>gi|260826580|ref|XP_002608243.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
gi|229293594|gb|EEN64253.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
Length = 1286
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 34/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--- 410
E ++ + + +R+ DPD++ GY I+ YL++R L + L R+ ++
Sbjct: 555 KEADMLAEWSSFIREVDPDLVTGYNIQNFDLPYLIKRAATLKVTKFPFLGRMKDMRSVIK 614
Query: 411 ----RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
++ + +N + M GR+ +L ++L + L+SYT + YH L ++
Sbjct: 615 DQNIQSKQMGKRENKYVNMEGRVTFDLLQVLLRDYKLRSYTLNAVSYHFLQQQKEDVHHS 674
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
++T + + V + + L + + I EMAR+ G+ +L+RG
Sbjct: 675 IITDLQNGSEQTRRRLAVYCLKDALLPLRLLDKLMSVINYM-EMARVTGVPLTYLLTRGQ 733
Query: 527 QFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
Q +V S +LR +R + V A+ S+ + A ++EP Y PI LDF S
Sbjct: 734 QIKVMSQLLRKAREQDLVIPAMQSSVSDEQYEGA-----TVIEPAKGYYDTPIATLDFSS 788
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C++T L S P L+ +PSG FV
Sbjct: 789 LYPSIMMAHNLCYTTLL----------STPSSRASLS---------PDQFIKTPSGNFFV 829
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K++R G+LP++L+ +L R K +K+
Sbjct: 830 KKTLRKGLLPEILENLLSARKKAKADLKK 858
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C++T L
Sbjct: 777 YDTPIATLDFSSLYPSIMMAHNLCYTTLL 805
>gi|387597148|gb|EIJ94768.1| hypothetical protein NEPG_00292 [Nematocida parisii ERTm1]
Length = 568
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 174/394 (44%), Gaps = 76/394 (19%)
Query: 327 QWDPDILIGYEIETFSWGYLLERHFVS----------------NEKELFSIFIENVRQWD 370
Q DP + IG + + ++E+ +EKE+ + + + V +
Sbjct: 203 QHDPVVQIGNAVAVYPSPVIIEKVLFCTRPTNPIPGVTIFSFMDEKEMLTAWSQWVSALN 262
Query: 371 PDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE-------------------VEKR 411
PD+L GY I YLL R LGL + SR E + +
Sbjct: 263 PDVLTGYNITQFDMPYLLNRAKALGLTKFKYFSRTDEPAETTQGLFKQDSNNSNKNGDAK 322
Query: 412 NSSRDEVKN-----TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
NS+ +E K+ L +PGR+V ++ +++ E L SY+ + L E+ +
Sbjct: 323 NSTSNEQKSGFTAPALLVVPGRLVFDMLDIVKKEFKLHSYSLNAVSSVFLGEQKEDVHYT 382
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
+ + K + V Y ++ T + IR++ + E+AR+ G+ +++RG
Sbjct: 383 QIKPLYNGTDETRKRLGV--YCLKDTYLPIRIMYTKNLFINYCELARVTGVPVEFLVNRG 440
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDFQ 583
RV S +LR ++ N++ P I + A E+ ++EP Y++P++VLD+
Sbjct: 441 QGIRVLSQLLRQAKKYNYIL--PVI-----IGAEETYEGGYVMEPNRGFYSNPVVVLDYA 493
Query: 584 SLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I+AYN C++T L + V H+ D T SP+G
Sbjct: 494 SLYPSIIMAYNLCYTTLLSKEQVAHMDKDD----------------------YTESPTGD 531
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
F+ + + G+LP +L +L+ R QS++ K
Sbjct: 532 YFLRREKKPGLLPVILTSLLEGRKPCVQSLRTQK 565
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSD 149
Y++P++VLD+ SLYPS+I+AYN C++T L + V H+ D
Sbjct: 482 FYSNPVVVLDYASLYPSIIMAYNLCYTTLLSKEQVAHMDKDD 523
>gi|410982338|ref|XP_003997514.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 3 [Felis
catus]
Length = 1124
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 189/427 (44%), Gaps = 68/427 (15%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E+EL + +R DPD++ GY I+ YL+ R L + L R++ +
Sbjct: 373 -----REEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPFLGRVSGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSTIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++ + +RL+E+L + EMAR+ G+
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAV--YCLKDAFLPLRLLERLMVLVNAMEMARVTGVPL 543
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA---HMRAPESLPLI-LEPES---- 570
+L+RG Q +V S +LR + + P +K + A PL +P S
Sbjct: 544 GYLLTRGQQVKVVSQLLRQAMREGLLM--PVVKTEGVEDYTGATVIEPLKGYDPVSGWGC 601
Query: 571 ---RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIR 625
R Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 602 LPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTED------------- 648
Query: 626 SLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTM 685
+P+G FV S+R G+LP++L+ +L R K + K ++ LR +
Sbjct: 649 -------QFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELA--KETDPLRRQVL 699
Query: 686 LNSMLLI 692
L +
Sbjct: 700 DGRQLAL 706
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
R Y PI LDF SLYPS+++A+N C++T L G + LG+++
Sbjct: 605 RYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTE 647
>gi|358057090|dbj|GAA96997.1| hypothetical protein E5Q_03671 [Mixia osmundae IAM 14324]
Length = 769
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 159/338 (47%), Gaps = 50/338 (14%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE------V 408
EKEL + + + DPD++IGY I YL+ R L ++ +SRI+ V
Sbjct: 35 EKELLHQWRNFIVEADPDVIIGYNIANFDIPYLIARAKHLKVHDFAYMSRISTRSAEKMV 94
Query: 409 EKRNS--------SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
E + S +RD + + M GRI ++ ++++ + L+SY+ + H L E+
Sbjct: 95 ETKESRFSSKAYGTRD---SKETPMDGRIQFDVLQVMQRDHKLRSYSLNAVCAHFLGEQK 151
Query: 461 P--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS +L E R L + + YL + RL+++L EMAR+ G+
Sbjct: 152 EDVHHSIITELQNGTPESRRRLAVYCLKDAYLPQ-----RLLDKLMSFINYIEMARVTGV 206
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LSRG Q +V S + R + +V PS+K E +I EP Y P
Sbjct: 207 PFNYLLSRGQQIKVVSQLFRKAGEEGYVI--PSLKGEGSDEQYEGATVI-EPTRGYYDVP 263
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS+++A+N C++T + + ++ LG ID ++
Sbjct: 264 IATLDFSSLYPSIMMAHNLCYTTLMDKKTIDRLGF-------LID------------KDY 304
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++P+G F R G+LP +L+++L R K MK
Sbjct: 305 IMTPNGDFFAKSHKRKGLLPTVLEDLLSARKRAKNDMK 342
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLG 146
Y PI LDF SLYPS+++A+N C++T + + ++ LG
Sbjct: 260 YDVPIATLDFSSLYPSIMMAHNLCYTTLMDKKTIDRLG 297
>gi|294890731|ref|XP_002773286.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878338|gb|EER05102.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 664
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 40/334 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQE-LSRITEV---- 408
+EK+L S F + + DPD++ GY I + YLL+R L ++ E L R+ V
Sbjct: 316 SEKDLLSSFQQYMVLVDPDVVTGYNIINFDFPYLLDRSAHLKVHPPFEYLGRLRGVASKV 375
Query: 409 -----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
E R R E N + + GR+ ++ +++ E L+SY+ + L E+
Sbjct: 376 KDSVFESRALGRRE--NKDINIEGRVQFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDV 433
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ ++ + K + V + L +RL+ +L + +EMAR+ G+ +L+
Sbjct: 434 HYSIIGDLQKGTPETRKRLAV-YCLKDALLPLRLMNKLVCMYNYTEMARVTGVPINYLLT 492
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG +V S + R +R + +V + Q++ +L+P + Y +PI LDF
Sbjct: 493 RGQMIKVASQLFRKARSHGYVIPA----QKSSPGGEYEGATVLDPSTGFYQNPIATLDFA 548
Query: 584 SLYPSVIIAYNYCFST----CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
SLYPS++ A+N C+ST + + E+L D + ++T +P
Sbjct: 549 SLYPSIMQAHNLCYSTLVQPSVAQRENLTEGD-------------------EGDVTRTPC 589
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G FV +S+R G+LP +L+E+L R K+ M +
Sbjct: 590 GHLFVKQSVRKGLLPMVLEELLQARKRAKKEMAQ 623
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +PI LDF SLYPS++ A+N C+ST
Sbjct: 537 FYQNPIATLDFASLYPSIMQAHNLCYST 564
>gi|321264115|ref|XP_003196775.1| delta DNA polymerase [Cryptococcus gattii WM276]
gi|317463252|gb|ADV24988.1| Delta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1049
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 174/395 (44%), Gaps = 53/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + FI NV + ++G ++ F
Sbjct: 266 GRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNTCAHIVGSQVLEFK-------- 317
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-------NLNQELS 403
+E++L + + V DPD++IGY I YLL+R L + L +
Sbjct: 318 ---DERQLLLEWRKFVEAVDPDMIIGYNISNFDLPYLLDRAKALKIPDFAFLGRLRNVRT 374
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-- 461
I E + + + + + M GR+ +++ ++++ + L+SYT + L E+
Sbjct: 375 EIKETHFSSKAYGQRDSKAVNMEGRLQLDILQVMQRDYKLRSYTLNAVCAQFLGEQKEDV 434
Query: 462 LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
HS +L + R L + + YL + RL+++L +EMAR+ G+ F
Sbjct: 435 HHSIITELQNGTADSRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVPFN 489
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q +V S + R + +V P++K E +I EP Y PI
Sbjct: 490 YLLSRGQQIKVVSQLYRNAADAGYVI--PALKSEGSDEQYEGATVI-EPSKGFYDVPIAT 546
Query: 580 LDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++A+N C++T L G +E L + + Q+ +
Sbjct: 547 LDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEG-------------------QDYVHT 587
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P+ F R G+LP +L+ +L R KQ +K
Sbjct: 588 PNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK 622
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+++A+N C++T L G +E L
Sbjct: 539 FYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERL 576
>gi|363753924|ref|XP_003647178.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890814|gb|AET40361.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1092
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 158/333 (47%), Gaps = 44/333 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E+++ + + V Q DPD++IGY + YL+ R L ++ R+ V++
Sbjct: 374 EEDMLKHWRDFVVQVDPDVIIGYNTTNFDFPYLINRAAALHVDSFPYFGRLPNVKQVIKE 433
Query: 411 ---RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
+ + ++ + + GR+ ++L + +R E L+SYT ++ H L E+ +
Sbjct: 434 TVFSSKAYGTRESKTINIDGRLQLDLLQFVRREYQLRSYTLNSVSAHFLGEQKEDVHHTI 493
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++ + E R L + + YL +RL+E+L + +EM+R+ G+ F +++
Sbjct: 494 ISSLYNGDSETRRRLAVYCLKDAYLP-----LRLLEKLMALVNYAEMSRVTGVPFSYLIT 548
Query: 524 RGSQFRVESIMLRLSRLNNFVA----VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
RG Q +V S + R + V SPS +Q ++EP Y PI
Sbjct: 549 RGQQIKVISQLFRKCFQIDIVIPNMHTSPSDEQYQGA-------TVIEPIRGYYDVPIAT 601
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS+++A+N C++T C V+ +LK+ ++ I+P+
Sbjct: 602 LDFNSLYPSIMMAHNLCYTTL----------------CNKSTVARLNLKE-NEDYIITPN 644
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G FV + R GILP +L E++ R K +K
Sbjct: 645 GDYFVTEKRRRGILPTILHELISARKRAKTDLK 677
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 595 YDVPIATLDFNSLYPSIMMAHNLCYTT 621
>gi|426389767|ref|XP_004065485.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit [Gorilla gorilla gorilla]
Length = 908
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 183/423 (43%), Gaps = 83/423 (19%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 321 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 372
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + +R DPD++ GY I+ YL+ R L + L R+ +
Sbjct: 373 -----KEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRVAGL 427
Query: 409 EKRNSSRD---EVKNTQ------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
R++ RD + K T + M GR+ +++ ++L E L+SYT + +H L E+
Sbjct: 428 --RSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ 485
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL +RL+E+L + EMAR+ G
Sbjct: 486 KEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLP-----LRLLERLMVLVNAVEMARVTG 540
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFV----------------AVSPSIKQRAHMRAP 559
+ +LSRG Q +V S +LR + + + P R RA
Sbjct: 541 VPLSYLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGEDYTGATVIEPLKGVRPQDRAG 600
Query: 560 ESLPLI-LEP-----ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS- 610
+ L+ L P R Y PI LDF SLYPS+++A+N C++T L G LG++
Sbjct: 601 AAWELLALTPGRGCSPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAHKLGLTE 660
Query: 611 DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQS 670
D F IR +P+G FV S+R G+LP++L+ +L R K
Sbjct: 661 DQF----------IR-----------TPTGDEFVKTSVRKGLLPQILENLLSARKRAKAE 699
Query: 671 MKE 673
+ +
Sbjct: 700 LAK 702
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
S R Y PI LDF SLYPS+++A+N C++T L G LG+++
Sbjct: 615 SPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGTAHKLGLTE 660
>gi|324120722|dbj|BAJ78752.1| DNA polymerase delta catalytic subunit [Forficula hiromasai]
Length = 1120
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 190/437 (43%), Gaps = 56/437 (12%)
Query: 252 IHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILI--------GQESELPEVRT 303
I+ +R L+ D A+D++ A P E KV I G++ PE
Sbjct: 299 INPTTRCQLECDIAWDKLIA------HTPEGEWSKVAPFRILSFDIECAGRKGIFPEPEH 352
Query: 304 KP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIF 362
P IQ+ + E+ FI NV + I + + FS+ E EL + +
Sbjct: 353 DPVIQIASMVQEQGQREPFIRNVFTLNTCATILHS-QVFSF---------QKESELLNEW 402
Query: 363 IENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSR------- 415
VR DPDI+ GY I Y+L R L ++ LSRI + S+
Sbjct: 403 ASFVRLVDPDIITGYNINNFDLPYILNRAKHLKVDKFAYLSRIKNICSVVKSKMLQSKQM 462
Query: 416 DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHR 475
+ +N + + GR+ +++ +L E L+ YT + YH L E+ +++
Sbjct: 463 GQRENKYVNLEGRVPFDMYLVLIREYKLRQYTLNAVSYHFLQEQKEDVHHSIISELQNGN 522
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
+ + + + + L + + FI EM+R+ G+ +L+RG Q +V S +L
Sbjct: 523 AQTRRRLAIYCLKDALLPLRLLDKLMSFINYM-EMSRVTGVSLSSLLTRGQQVKVVSQLL 581
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R SR ++ P+ A E +I EP Y PI LDF SLYPS+++A+N
Sbjct: 582 RHSRARGYLM--PAHTXSAGDEQFEGATVI-EPRRGYYPHPIATLDFSSLYPSIMMAHNL 638
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPK 655
C++T + + R++ Q LT +P+ FV S+R G+LP+
Sbjct: 639 CYTTLVPP-------------------NKRNIVPADQ-LTHTPANNLFVKASVRKGLLPE 678
Query: 656 MLQEILDTRLMVKQSMK 672
+L+++L R K +K
Sbjct: 679 ILEDLLAARKQAKADLK 695
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
R Y PI LDF SLYPS+++A+N C++T
Sbjct: 612 RRGYYPHPIATLDFSSLYPSIMMAHNLCYTT 642
>gi|330921129|ref|XP_003299297.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
gi|311327099|gb|EFQ92613.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 181/392 (46%), Gaps = 48/392 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D I E FS+
Sbjct: 320 GRKGIFPEANVDPVIQIANVVTRYGEQKPFVRNVFCLDTVSSIA-STEIFSF-------- 370
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TE 407
NE E+ + + V Q DPD++IGY I + YLL+R L L +R+ ++
Sbjct: 371 -QNEGEMLMKWRDFVEQVDPDVIIGYNINNFDFPYLLDRAKHLKLQRFPYWTRLKTVQSK 429
Query: 408 VEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
VE + S ++ N + GR+ ++L +L++ + +L+SYT ++ H L E+
Sbjct: 430 VESSHFSSKQLGNRDTKTTNTNGRLQLDLLQLIQRDHHLRSYTLNSVCAHFLKEQKEDVH 489
Query: 465 WKLLTCWWEHRTHLYKWMTV----EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + ++ + + V + YL + RL+++L + +EMAR+ G+ F
Sbjct: 490 HSMITELFNGDSNSRRRLAVYCLKDAYLPQ-----RLLDKLMCLVNYTEMARVTGVPFNY 544
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q R S + R + + + P + + ++EP+ Y DP+ L
Sbjct: 545 ILSRGQQIRFISQLFRKALDHQLIV--PDLPNQGDSSDQYEGATVIEPKRGYYRDPVATL 602
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPS 639
DF SLYPS++ A+N C++T L + ++ LK K ++ ++P
Sbjct: 603 DFASLYPSIMQAHNLCYTTWLDK------------------QTVEKLKMKKDEDYIVTPH 644
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G F R G+L ++L+E+L R K+ +
Sbjct: 645 GDMFCTAKTRKGLLTEILEEVLSARKKAKREL 676
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y DP+ LDF SLYPS++ A+N C++T L +
Sbjct: 595 YRDPVATLDFASLYPSIMQAHNLCYTTWLDK 625
>gi|405119357|gb|AFR94130.1| delta DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 1059
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 151/329 (45%), Gaps = 53/329 (16%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNT 421
F+E V DPD++IGY I YLL+R L + L R+ V R EVK T
Sbjct: 339 FVETV---DPDMIIGYNISNFDLPYLLDRAKALKIPDFAFLGRLRNV------RTEVKET 389
Query: 422 Q-------------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHS-- 464
+ M GR+ +++ ++++ + L+SYT + L E+ HS
Sbjct: 390 HFSSKAYGQRDSKAVNMEGRLQLDILQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHSII 449
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+L + R L + + YL + RL+++L +EMAR+ G+ F +LSR
Sbjct: 450 TELQNGTADSRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARVTGVPFNYLLSR 504
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + R + +V P++K E +I EP Y PI LDF S
Sbjct: 505 GQQIKVVSQLYRNAADAGYVI--PALKSEGSDEQYEGATVI-EPSKGFYDVPITTLDFAS 561
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTISPSGVAF 643
LYPS+++A+N C++T L R +I LK ++ ++ +P+ F
Sbjct: 562 LYPSIMMAHNLCYTTLLDR------------------GTIERLKLVEGEDYVHTPNNDFF 603
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
R G+LP +L+ +L R KQ +K
Sbjct: 604 ATSKRRKGLLPHILENLLAARKRAKQDLK 632
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L R
Sbjct: 549 FYDVPITTLDFASLYPSIMMAHNLCYTTLLDR 580
>gi|401881076|gb|EJT45381.1| zeta DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 1157
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGY-VLGLNLNQELSRITE- 407
H V +E +L + I+ V++WDPD+L G+E+ SWGYL R L + ++LSR+
Sbjct: 996 HVVDSELDLINWVIDAVKEWDPDVLTGWELHNASWGYLSARAAESFDLEMVRDLSRMVSD 1055
Query: 408 -VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ R + ++ GR +N+WR++R EVNL SY+FEN+++HVLH RIP +S
Sbjct: 1056 TTQNRKDGYSAHHTSTFKVNGRHTLNIWRIMRGEVNLNSYSFENVVFHVLHRRIPRYSAA 1115
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTS 508
LT W+ R+ + + RV +++ + I + +
Sbjct: 1116 NLTALWKSRSPEHTARVLHMLFERVVIYAEVMDTAEIISKNA 1157
>gi|58260420|ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229701|gb|AAW46103.1| delta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1058
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 175/401 (43%), Gaps = 65/401 (16%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + FI NV + ++G ++ F
Sbjct: 275 GRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNTCAHIVGSQVLEFK-------- 326
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E++L + + V DPD++IGY I YLL+R L + L R+ V
Sbjct: 327 ---DERQLLLEWRKFVDTVDPDMIIGYNISNFDLPYLLDRAKALKIPDFAFLGRLRNV-- 381
Query: 411 RNSSRDEVKNTQ-------------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
R EVK T + M GR+ +++ ++++ + L+SYT + L
Sbjct: 382 ----RTEVKETHFSSKAYGQRDSKAVNMEGRLQLDILQVMQRDYKLRSYTLNAVCAQFLG 437
Query: 458 ERIP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
E+ HS +L + R L + + YL + RL+++L +EMAR+
Sbjct: 438 EQKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARV 492
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLY 573
G+ F +LSRG Q +V S + R + +V P++K E +I EP Y
Sbjct: 493 TGVPFNYLLSRGQQIKVISQLYRNAADAGYVI--PALKSEGSDEQYEGATVI-EPSKGFY 549
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
PI LDF SLYPS+++A+N C++T L G +E L + +
Sbjct: 550 DVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEG------------------- 590
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++ +P+ F R G+LP +L+ +L R KQ +K
Sbjct: 591 EDYVHTPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK 631
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+++A+N C++T L G +E L
Sbjct: 548 FYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERL 585
>gi|296816038|ref|XP_002848356.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS
113480]
gi|238841381|gb|EEQ31043.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS
113480]
Length = 1113
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 50/327 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE----------KR 411
F+E V DPD++IGY I + YLL+R LG SR+ V+ K+
Sbjct: 388 FVEKV---DPDVIIGYNIANFDFPYLLDRAEHLGCTKFPYWSRLKGVQSHAIKASFSSKQ 444
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
RD + NT GRI ++L +L++ + +L+SYT ++ L E+ ++T
Sbjct: 445 MGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 500
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +L+RG
Sbjct: 501 LYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLARGQ 555
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P +K + ++EP Y PI LDF SLY
Sbjct: 556 QIKFISQLFRKALEQKLVI--PDLKNDENSNQQYEGATVIEPVRDYYPVPIATLDFASLY 613
Query: 587 PSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+I A+N C++T L + VE LG+ K ++ ++P+ F
Sbjct: 614 PSIIQAHNLCYTTLLNKRTVEKLGL-------------------KKGEDYIVTPNDDMFC 654
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++L+E+L R K+ +
Sbjct: 655 TAKVRKGLLSQILEELLSARKRAKREL 681
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 600 YPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEKLGL 638
>gi|295661753|ref|XP_002791431.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279988|gb|EEH35554.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1110
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 179/394 (45%), Gaps = 53/394 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V F+ NV D +++ +I F
Sbjct: 323 GRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNTQILEFD-------- 374
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E+ + + E + + DPD++IGY I + YL++R L SR+T+V
Sbjct: 375 ---TEERMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAEHLKCREFPFWSRLTQVAS 431
Query: 411 RNS----SRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPL 462
R S ++ N + + GRI ++L +L++ + L+SYT ++ L E + +
Sbjct: 432 RVGDARFSSKQIGNRESKSTNISGRIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDV 491
Query: 463 HSW---KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
H +L + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 492 HHTMITELFNGTADSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFN 546
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q + S + R + V P+++ A E +I EP Y PI
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQQLVI--PNLRNEATSEQYEGATVI-EPLRAYYDVPIAT 603
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+I A+N C++T L + +E G+ + ++ ++
Sbjct: 604 LDFASLYPSIIQAHNLCYTTLLKKSTIEAHGMKEG-------------------EDYIVT 644
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G F +R G+L ++L+E+L R K+ +
Sbjct: 645 PNGDRFCTAKVRKGLLTQILEELLGARKRAKKEL 678
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 109 RLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
R Y D PI LDF SLYPS+I A+N C++T L +
Sbjct: 594 RAYYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 627
>gi|169775879|ref|XP_001822406.1| DNA polymerase delta catalytic subunit [Aspergillus oryzae RIB40]
gi|238502533|ref|XP_002382500.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|83771141|dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691310|gb|EED47658.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|391871049|gb|EIT80215.1| DNA polymerase delta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1104
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 181/396 (45%), Gaps = 58/396 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V FI NV D +++ +I F
Sbjct: 318 GRKGIFPEPNQDPVIQIANVVTRYGESKPFIRNVFVLDTCSLIVNTQILEFE-------- 369
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQELS 403
E+++ + + V++ DPD++IGY I + YLL+R G+ LN +S
Sbjct: 370 ---KEEKMLMAWRDFVQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLNGVMS 426
Query: 404 RITEVE---KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ E K+ +RD + NT GRI ++L +L++ + +L+SYT ++ Y L E+
Sbjct: 427 QAKETNFSSKQMGNRDTKATNTN----GRIQLDLLQLVQRDYHLRSYTLNSVSYEFLGEQ 482
Query: 460 IPLHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + R L + + YL + RL+++L + +EMAR+ G
Sbjct: 483 KEDVHHTMITELHNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLINYTEMARVTG 537
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q + S + R + V + + + ++EP Y
Sbjct: 538 VPFNFLLSRGQQVKFMSQLFRKALEQQLVIPNNTPESEQEYEGA----TVIEPVRGYYNV 593
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
PI LDF SLYPS+I A+N C++T L + V +LKK ++
Sbjct: 594 PIATLDFASLYPSIIQAHNLCYTTLLNKKA----------------VERYNLKK-DEDYI 636
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++P+G F +R G+L ++L+E+L R K+ +
Sbjct: 637 VTPNGDLFCTTKVRKGLLSQILEELLAARKRAKKEL 672
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 591 YNVPIATLDFASLYPSIIQAHNLCYTTLLNK 621
>gi|134117391|ref|XP_772922.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255540|gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 175/401 (43%), Gaps = 65/401 (16%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ + FI NV + ++G ++ F
Sbjct: 276 GRKGIFPEANVDPVIQIAAMVTRHGESKPFIRNVFTLNTCAHIVGSQVLEFK-------- 327
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E++L + + V DPD++IGY I YLL+R L + L R+ V
Sbjct: 328 ---DERQLLLEWRKFVDTVDPDMIIGYNISNFDLPYLLDRAKALKIPDFAFLGRLRNV-- 382
Query: 411 RNSSRDEVKNTQ-------------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
R EVK T + M GR+ +++ ++++ + L+SYT + L
Sbjct: 383 ----RTEVKETHFSSKAYGQRDSKAVNMEGRLQLDILQVMQRDYKLRSYTLNAVCAQFLG 438
Query: 458 ERIP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
E+ HS +L + R L + + YL + RL+++L +EMAR+
Sbjct: 439 EQKEDVHHSIITELQNGTADSRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYTEMARV 493
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLY 573
G+ F +LSRG Q +V S + R + +V P++K E +I EP Y
Sbjct: 494 TGVPFNYLLSRGQQIKVISQLYRNAADAGYVI--PALKSEGSDEQYEGATVI-EPSKGFY 550
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
PI LDF SLYPS+++A+N C++T L G +E L + +
Sbjct: 551 DVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEG------------------- 591
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
++ +P+ F R G+LP +L+ +L R KQ +K
Sbjct: 592 EDYVHTPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLK 632
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHL 145
Y PI LDF SLYPS+++A+N C++T L G +E L
Sbjct: 549 FYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERL 586
>gi|78191525|gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens]
Length = 1133
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 130/570 (22%), Positives = 238/570 (41%), Gaps = 103/570 (18%)
Query: 167 NKDSIHEAEITHPD------CSKSSQIDFNPDLFKSFIR-----KQLETPKRRICD-SYA 214
++DS E+T P CS+ S ++ F+R +L P RR+ +
Sbjct: 173 SRDSRGGRELTGPAVLAVELCSRESMFGYHGHGPSPFLRITVALPRLVAPARRLLEQGIR 232
Query: 215 IDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYD---EVKA 271
+ + + Y+ +D E+ V+ + +E+ A AL + A E
Sbjct: 233 VAGLGTPSFAPYEANVDF--EIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEADV 290
Query: 272 IFYYLYTCPPEED-RKVGIILI--------GQESELPEVRTKPI----QMNFVSNEKELF 318
++ + + PPE +++ + + G++ PE P+ + E E F
Sbjct: 291 LWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPF 350
Query: 319 STFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYE 378
+R P ++G +++++ E++L + +R DPD++ GY
Sbjct: 351 LRLALTLRPCAP--ILGAKVQSYE-----------KEEDLLQAWSTFIRIMDPDVITGYN 397
Query: 379 IETLSWGYLLERGYVLGLNLNQELSRITEV---------EKRNSSRDEVKNTQLQMPGRI 429
I+ YL+ R L + L R+ + + + + R + K + M GR+
Sbjct: 398 IQNFDLPYLISRAQTLKVQTFPFLGRVAGLCSNIRDSSFQSKQTGRRDTKV--VSMVGRV 455
Query: 430 VINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLI 489
+++ ++L E L+SYT + +H L E+ ++T + + V Y +
Sbjct: 456 QMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAV--YCL 513
Query: 490 RVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFV---- 544
+ + +RL+E+L + EMAR+ G+ +LSRG Q +V S +LR + +
Sbjct: 514 KDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMPVV 573
Query: 545 ------------AVSPSIKQRAHMRAPESLPLI-LEP-----ESRLYTDPIIVLDFQSLY 586
+ P R RA + L+ L P R Y PI L F SLY
Sbjct: 574 KSEGGEDYTGATVIGPLKGVRPQDRAGAAWELLALTPGRGCSPPRYYDVPIATLGFSSLY 633
Query: 587 PSVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
PS+++A+N C++T L G + LG++ D F IR +P+G F
Sbjct: 634 PSIMMAHNLCYTTLLRPGTAQKLGLTEDQF----------IR-----------TPTGDEF 672
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V S+R G+LP++L+ +L R K + +
Sbjct: 673 VKTSVRKGLLPQILENLLSARKRAKAELAK 702
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 106 SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSD 149
S R Y PI L F SLYPS+++A+N C++T L G + LG+++
Sbjct: 615 SPPRYYDVPIATLGFSSLYPSIMMAHNLCYTTLLRPGTAQKLGLTE 660
>gi|170104866|ref|XP_001883646.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641281|gb|EDR05542.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 188/399 (47%), Gaps = 59/399 (14%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E FI NV + ++G ++ +F
Sbjct: 279 GRKGIFPEASVDPVIQIANMVTIQGE-HKPFIRNVFTLNSCSHIVGSQVLSFD------- 330
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI--TE 407
+E ++ + + V Q DPD++IGY I + YL++R + L ++ +
Sbjct: 331 ----DEAKMLHSWRDFVEQVDPDVVIGYNIAGFDFPYLMDRAKAIKAIKFPYLGKLKNVK 386
Query: 408 VEKRNS-------SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
VE +N+ + + K+T L GR+ +++ + ++ E L+SYT ++ L E+
Sbjct: 387 VETKNTHFSSKAYGQRDSKDTPLD--GRLQLDVLQFMQREHKLRSYTLNSVCAQFLGEQK 444
Query: 461 P--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
HS +L E R L + + YL + RL+++L EMAR+ G+
Sbjct: 445 EDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQ-----RLLDKLMCFVNYIEMARVTGV 499
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LSRG +V S + R + N+ V PS+K E +I EP+ Y P
Sbjct: 500 PFNYLLSRGQSIKVLSQLFR--KANDEGYVVPSMKGEGSDEQYEGATVI-EPKKGYYDVP 556
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
I LDF SLYPS+++A+N C++T L + ++ LG+ ++ + +Q
Sbjct: 557 IATLDFSSLYPSIMMAHNLCYTTLLDKATIDRLGL--------------VKDVDYIQ--- 599
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ F R G+LP +L++++ R K +K+
Sbjct: 600 --TPNNDLFATTKKRKGLLPTILEDLISARKRAKADLKK 636
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T L + ++ LG+
Sbjct: 553 YDVPIATLDFSSLYPSIMMAHNLCYTTLLDKATIDRLGL 591
>gi|324120754|dbj|BAJ78768.1| DNA polymerase delta catalytic subunit [Chrysoperla nipponensis]
Length = 1052
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 37/329 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E ++ + + E VR+ DPD++ GY I YL R L L+ L R+ V +
Sbjct: 322 EGDMLNAWAEFVRKLDPDVVTGYNINNFDLPYLTNRAKTLKLDKFPFLGRLKNVV--SVV 379
Query: 415 RDEVKNTQL---------QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHS 464
R++V ++L M GR+ ++ + R L+SYT N+ +L ++ +H
Sbjct: 380 REKVTQSKLLGRREYKYVNMEGRLPYDMLIVARRNCRLRSYTLNNVAQELLGQQKEDVHH 439
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
++ + ++ Y I+ + +R++ L+ E+AR+ G+ +++
Sbjct: 440 TQISDLFNGDEQTRHRLAV---YCIKDAQLPLRILNHLNSFTNDMELARVSGVTINLLMT 496
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q +V + +L ++ ++ P K + E +I EP YTDPI LDF
Sbjct: 497 RGEQIKVVTQLLSQAQAAGYLM--PVYKGQGTDDQFEGATVI-EPVRGYYTDPIATLDFN 553
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+++A+N C++T L H D F + +T +PS F
Sbjct: 554 SLYPSIMMAHNLCYTTLL----HPSNKDKFGL--------------TEDQITKTPSNHFF 595
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
V ++R G+LP +L+ +L R K+ ++
Sbjct: 596 VKPTVRRGLLPYILENLLAARKKAKKELE 624
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
YTDPI LDF SLYPS+++A+N C++T L
Sbjct: 543 YTDPIATLDFNSLYPSIMMAHNLCYTTLL 571
>gi|119482197|ref|XP_001261127.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
gi|119409281|gb|EAW19230.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
Length = 1105
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 156/326 (47%), Gaps = 50/326 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQELSRITEVE---KR 411
F+E V DPD++IGY I + YLL+R G+ L S+ T K+
Sbjct: 382 FLEKV---DPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLKGMASQATSTNFSSKQ 438
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+RD + NT GRI ++L +L++ + +L+SYT ++ Y L E+ ++T
Sbjct: 439 MGNRDTKATNTN----GRIQLDLLQLVQRDYHLRSYTLNSVSYEFLKEQKEDVHHTMITE 494
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +LSRG
Sbjct: 495 LFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLSRGQ 549
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P++K + ++EP Y PI LDF SLY
Sbjct: 550 QVKFLSQLFRKALEQQLVI--PNMKSTDEQDYEGAT--VIEPSRGYYGVPIATLDFASLY 605
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGVAFVD 645
PS+I A+N C++T L + S+ LK K ++ ++P+G F
Sbjct: 606 PSIIQAHNLCYTTLLNK------------------NSVEKLKLKKDEDYIVTPNGDMFCT 647
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++L+E+L R K+ +
Sbjct: 648 TKVRKGLLSQILEELLAARKRAKKEL 673
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y PI LDF SLYPS+I A+N C++T L + VE L
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVEKL 628
>gi|167533381|ref|XP_001748370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773182|gb|EDQ86825.1| predicted protein [Monosiga brevicollis MX1]
Length = 1305
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 165/373 (44%), Gaps = 72/373 (19%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQELSRITE 407
EK++ + E VR+ DPD++ GY I YL R LG L SR+T+
Sbjct: 396 EKQMLEAWSEFVREADPDVITGYNIPNFDLPYLYNRANKLGATKFPFLGRLKNVQSRLTD 455
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
V+ + + ++ L M GR+ ++ ++L+ + L+SY+ ++ + L E+ +
Sbjct: 456 VKFSSKAYGTRESKALSMEGRVTFDVLQVLQRDYKLRSYSLNSVSANFLGEQKEDVHHSI 515
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + R L + + YL +RL+++L I EMAR+ G+ F +LS
Sbjct: 516 ITDLQLGNDQSRRRLAVYCMKDAYL-----PLRLLDKLMCIVNYIEMARVTGVPFSYLLS 570
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPES------------- 570
RG Q +V S ++R + ++ + P + +A E +I EP+
Sbjct: 571 RGQQIKVVSQLMRHAGEHDLII--PVMDSQASEEQYEGATVI-EPKRGDILSCFLGAGLG 627
Query: 571 -------------------RLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
Y PI LDF SLYPS++ A+N C++T V D
Sbjct: 628 HDLNTCGGGLDIRFNARPIGYYDIPIATLDFSSLYPSIMQAHNLCYTTL--------VKD 679
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G + + IR +P+G FV ++R G+LP++L +LD R K+ +
Sbjct: 680 KSVLGNLKPDEYIR-----------TPTGDHFVKTNVRQGLLPQILTSLLDARKRAKKDL 728
Query: 672 KEYK--FSESLRN 682
K K F S+ N
Sbjct: 729 KNEKDPFRRSVLN 741
>gi|3480|emb|CAA33504.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 1093
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 47/339 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----------LNQEL 402
+ E+E+ S + + + DPD++IGY YLL R L +N + QE+
Sbjct: 375 ATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEI 434
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
K +R E KN + GR+ ++L + ++ E L+SYT + H L E+
Sbjct: 435 KESVFSSKAYGTR-ETKNVNID--GRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKED 491
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+ +++ E R L + + YL +RL+E+L + +EMAR+ G+ F
Sbjct: 492 VHYSIISDLQNGDSETRRRLAVYCLKDAYLP-----LRLMEKLMALVNYTEMARVTGVPF 546
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q +V S + R + V P+++ +A E +I EP Y PI
Sbjct: 547 SYLLARGQQIKVVSQLFR--KCLEIDTVIPNMQSQASDDQYEGATVI-EPIRGYYDVPIA 603
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+++A+N C++T + VE L + K+ ++ I
Sbjct: 604 TLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL-------------------KIDEDYVI 644
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
G FV R GILP +L E++ R K+ +++ K
Sbjct: 645 H-YGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEK 682
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+++A+N C++T + VE L +
Sbjct: 598 YDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNL 636
>gi|121716875|ref|XP_001275938.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
gi|119404095|gb|EAW14512.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
Length = 1105
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 161/340 (47%), Gaps = 52/340 (15%)
Query: 350 HFVSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQ 400
F EK L + F+E V DPD++IGY I + YLL+R G+ +
Sbjct: 368 EFDKEEKMLMAWRDFLEKV---DPDVIIGYNIANFDFPYLLDRAKHLKCGGFPYWTRMKG 424
Query: 401 ELSRITEVE---KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
LS+ T K+ +RD + NT GRI ++L +L++ + +L+SYT ++ Y L
Sbjct: 425 ILSQATSTNFSSKQMGNRDTKATNTN----GRIQLDLLQLVQRDYHLRSYTLNSVSYEFL 480
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + + R L + + YL + RL+++L + +EMAR
Sbjct: 481 KEQKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMAR 535
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LSRG Q + S + R + V P++K + ++EP
Sbjct: 536 VTGVPFNFLLSRGQQVKFLSQLFRKALEQQLVI--PNMKSTDEQDYEGA--TVIEPIRGY 591
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQ 631
Y PI LDF SLYPS+I A+N C++T L + S+ LK K
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNK------------------NSVEKLKLKKD 633
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ ++P+G F +R G+L ++L+E+L R K+ +
Sbjct: 634 DDYIVTPNGDMFCTAKVRKGLLSQILEELLSARKRAKKEL 673
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y PI LDF SLYPS+I A+N C++T L + VE L
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVEKL 628
>gi|169849845|ref|XP_001831621.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116507259|gb|EAU90154.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 1081
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 180/401 (44%), Gaps = 62/401 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E FI NV + ++G ++ +F
Sbjct: 296 GRKGVFPEASVDPVIQIANMVTRQGE-SQPFIRNVFTLNTCSHIVGSQVLSFE------- 347
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
+E ++ + + V + DPD++IGY I + YL++R L L L R +
Sbjct: 348 ----DEGKMLQAWRDFVSEVDPDLVIGYNISGFDFPYLMDRAQALKLTKFPYLGRFKNI- 402
Query: 410 KRNSSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
+ EVKNT + GR+ +++ + ++ E L+SY+ ++ L
Sbjct: 403 -----KTEVKNTHFSSRAYGQRDSKETTLDGRLQLDILQFMQREHKLRSYSLNSVCAQFL 457
Query: 457 HERIP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ HS +L E R L + + YL + RL+++L +EMAR
Sbjct: 458 GEQKEDVHHSVITELQNGTPESRRRLAIYCLKDAYLPQ-----RLMDKLMCFVNYAEMAR 512
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +L+RG +V S + R + ++ PS+K ++EP+
Sbjct: 513 VTGVPFNFLLARGQSIKVLSQLYRKANSEGYLI--PSMKGGGDGEDQYEGATVIEPKKGY 570
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y PI LDF SLYPS+++A+N C++T L + ID ++ + +Q
Sbjct: 571 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNK------------ATIDRLSLVKDVDYVQ- 617
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ F R G+LP +L++++ R K +K+
Sbjct: 618 ----TPNNDYFATPVRRKGLLPTILEDLISARKRAKADLKK 654
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 571 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNKA 602
>gi|225682079|gb|EEH20363.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb03]
Length = 1110
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 179/394 (45%), Gaps = 53/394 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V F+ NV D +++ +I F
Sbjct: 323 GRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNTQILEFD-------- 374
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E+++ + E + + DPD++IGY I + YL++R L SR+T+V
Sbjct: 375 ---TEEKMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAEHLKCREFPFWSRLTQVAS 431
Query: 411 RNS----SRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPL 462
R S ++ N + + GRI ++L +L++ + L+SYT ++ L E + +
Sbjct: 432 RVGDARFSSKQIGNRESKSTNISGRIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDV 491
Query: 463 HSW---KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
H +L + R L + + YL + RL+++ + +EMAR+ G+ F
Sbjct: 492 HHTMITELFNGTADSRRRLAVYCLKDAYLPQ-----RLMDKFMCLVNYTEMARVTGVPFN 546
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q + S + R + V P+++ A E +I EP Y PI
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQQLVI--PNLRNEATSEQYEGATVI-EPLRAYYDVPIAT 603
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+I A+N C++T L + +E G+ + ++ ++
Sbjct: 604 LDFASLYPSIIQAHNLCYTTLLKKSTIEAHGMKEG-------------------EDYIVT 644
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G F +R G+L ++L+E+L R K+ +
Sbjct: 645 PNGDRFCTAKVRKGLLTQILEELLGARKRAKKEL 678
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 109 RLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
R Y D PI LDF SLYPS+I A+N C++T L +
Sbjct: 594 RAYYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 627
>gi|226289255|gb|EEH44767.1| DNA polymerase delta catalytic subunit [Paracoccidioides
brasiliensis Pb18]
Length = 1110
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 179/394 (45%), Gaps = 53/394 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V F+ NV D +++ +I F
Sbjct: 323 GRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLIVNTQILEFD-------- 374
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
E+++ + E + + DPD++IGY I + YL++R L SR+T+V
Sbjct: 375 ---TEEKMLMAWKEFLVEVDPDVIIGYNIANFDFPYLIKRAEHLKCREFPFWSRLTQVAS 431
Query: 411 RNS----SRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPL 462
R S ++ N + + GRI ++L +L++ + L+SYT ++ L E + +
Sbjct: 432 RVGDARFSSKQIGNRESKSTNISGRIQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDV 491
Query: 463 HSW---KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
H +L + R L + + YL + RL+++ + +EMAR+ G+ F
Sbjct: 492 HHTMITELFNGTADSRRRLAVYCLKDAYLPQ-----RLMDKFMCLVNYTEMARVTGVPFN 546
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG Q + S + R + V P+++ A E +I EP Y PI
Sbjct: 547 FLLSRGQQVKFISQLFRKALEQQLVI--PNLRNEATSEQYEGATVI-EPLRAYYDVPIAT 603
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+I A+N C++T L + +E G+ + ++ ++
Sbjct: 604 LDFASLYPSIIQAHNLCYTTLLKKSTIEAHGMKEG-------------------EDYIVT 644
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G F +R G+L ++L+E+L R K+ +
Sbjct: 645 PNGDRFCTAKVRKGLLTQILEELLGARKRAKKEL 678
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 109 RLYTD-PIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
R Y D PI LDF SLYPS+I A+N C++T L +
Sbjct: 594 RAYYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 627
>gi|71002632|ref|XP_755997.1| DNA polymerase delta catalytic subunit Cdc2 [Aspergillus fumigatus
Af293]
gi|66853635|gb|EAL93959.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
fumigatus Af293]
gi|159130051|gb|EDP55165.1| DNA polymerase delta large chain [Aspergillus fumigatus A1163]
Length = 1105
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 54/341 (15%)
Query: 350 HFVSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQ 400
F EK L + F+E V DPD++IGY I + YLL+R G+ L
Sbjct: 368 EFDKEEKMLMAWRDFLEKV---DPDVIIGYNIANFDFPYLLDRAKHLKCTGFPYWTRLKG 424
Query: 401 ELSRITEVE---KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
S+ T K+ +RD + NT GRI ++L +L++ + +L+SYT ++ Y L
Sbjct: 425 MASQATSTSFSSKQMGNRDTKATNTN----GRIQLDLLQLVQRDYHLRSYTLNSVSYEFL 480
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + + R L + + YL + RL+++L + +EMAR
Sbjct: 481 KEQKEDVHHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMAR 535
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LSRG Q + S + R + V P+IK + ++EP
Sbjct: 536 VTGVPFNFLLSRGQQVKFLSQLFRKALEQQLVI--PNIKSTDEQDYEGAT--VIEPIRGY 591
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y PI LDF SLYPS+I A+N C++T L + VE L LKK
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNIVEKL------------------KLKK- 632
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++ ++P+G F +R G+L ++L+E+L R K+ +
Sbjct: 633 DEDYIVTPNGDMFCTTKVRKGLLSQILEELLAARKRAKKEL 673
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y PI LDF SLYPS+I A+N C++T L + VE L
Sbjct: 592 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNIVEKL 628
>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
Length = 1057
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 38/338 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL-----GLNLNQELSRITEV 408
E EL + VR DPDI+ GY + YLL+R L L EL R+
Sbjct: 314 TEPELLKKWAAFVRLVDPDIITGYNTQNFDIPYLLKRAQTLKRKDASLAAFSELGRVLGS 373
Query: 409 EKR-------NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERI 460
R ++ + +N + + GR++ +L + L SY+ ++ L ++
Sbjct: 374 HARMRDTSIQSAQMGKRENVETTVDGRVMFDLLPYMFRNHKLSSYSLNSVCAEFLGSQKE 433
Query: 461 PLHS---WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+H L E R L + + YL+ I+L+ +L + EMAR+ G+
Sbjct: 434 DVHHSIIADLQRGTDEDRRRLAVYCLKDSYLV-----IQLMTKLAVLINYVEMARVTGVP 488
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH-MRAPESLPLILEPESRLYTDP 576
+LSRG Q +V S++LR R +N + P++ + + A ++EP+ Y +P
Sbjct: 489 LDFLLSRGQQIKVFSMLLRRCRASNLLV--PNLAKHGNDGDAKFEGATVIEPKKAFYEEP 546
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
I LDF SLYPS++ AYN C+ST L + + FP G Q
Sbjct: 547 IATLDFASLYPSIMQAYNLCYSTILTKQD---AERHFPGGA----------DTAYQAGPQ 593
Query: 637 SPSGV-AFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
GV FV + G+LP++L ++L R K MK+
Sbjct: 594 CVDGVHHFVTAKTKRGVLPQILADLLAARKRAKADMKK 631
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESNQSPP 166
+ Y +PI LDF SLYPS++ AYN C+ST L + + FP G + ++ P
Sbjct: 539 KKAFYEEPIATLDFASLYPSIMQAYNLCYSTILTKQD---AERHFPGGADTAYQAG--PQ 593
Query: 167 NKDSIH 172
D +H
Sbjct: 594 CVDGVH 599
>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana
RWD-64-598 SS2]
Length = 1096
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 51/395 (12%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ N V+ + E FI N+ + ++G ++ +F+
Sbjct: 311 GRKGIFPEAQVDPVIQIANMVTIQGES-QPFIRNIFTLNTCSHIVGSQVMSFN------- 362
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR----- 404
+E E+ + + + + + DPD++IGY I + YL +R LG + R
Sbjct: 363 ----DEAEMLNAWSQFIAEVDPDVIIGYNISNFDFPYLFDRAKHLGAKQFPQFGRMKGWA 418
Query: 405 --ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP- 461
I + + + + + + + GR+ +++ + ++ E L+SYT ++ L E+
Sbjct: 419 AAIKDTHFSSKAFGQRDSKEALIHGRLQLDVLQFMQREHKLRSYTLNSVCAQFLGEQKED 478
Query: 462 -LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
HS +L E R L + + YL + RL+++L EMAR+ G+ F
Sbjct: 479 VHHSVITELQNGGPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFVNYIEMARVTGVPF 533
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG +V S + R R N P+ K E +I EP+ Y PI
Sbjct: 534 NYLLSRGQSIKVLSQLYR--RANEEGYAIPAFKGEGSDEQYEGATVI-EPKKGYYDAPIA 590
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+++A+N C++T L + ID ++ + +Q +P
Sbjct: 591 TLDFSSLYPSIMMAHNLCYTTLLDK------------KTIDRLELVKDVDYIQ-----TP 633
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ F +R G+LP +L++++ R K +K+
Sbjct: 634 NNDFFATAKMRKGLLPSILEDLIGARKRAKADLKK 668
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 585 YDAPIATLDFSSLYPSIMMAHNLCYTTLLDK 615
>gi|315042333|ref|XP_003170543.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345577|gb|EFR04780.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1112
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 52/341 (15%)
Query: 350 HFVSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------N 397
F EK L + F+E V DPD++IGY I + YLLER L
Sbjct: 373 EFEQEEKMLMAWRDFVERV---DPDVIIGYNIANFDFPYLLERAEHLNCLKFPYWTRLKG 429
Query: 398 LNQELSRITEVEKRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
+ + ++ + K+ RD + NT GRI ++L +L++ + +L+SYT ++ L
Sbjct: 430 VPSQATKTSFASKQMGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFL 485
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + + R L + + YL + RL+++L + +EMAR
Sbjct: 486 GEQKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMAR 540
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +L+RG Q + S + R + V P +K + ++EP
Sbjct: 541 VTGVPFNFLLARGQQIKFISQLFRKALEQKLVI--PDLKNDENSNQQYEGATVIEPVRDY 598
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y PI LDF SLYPS+I A+N C++T L + VE LG+ K
Sbjct: 599 YAVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEKLGL-------------------KK 639
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++ ++P+ F IR G+L ++L+E+L R K+ +
Sbjct: 640 GEDYIVTPNDDMFCTTKIRKGLLSQILEELLTARKRAKREL 680
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 599 YAVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEKLGL 637
>gi|189207907|ref|XP_001940287.1| DNA polymerase delta catalytic subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976380|gb|EDU43006.1| DNA polymerase delta catalytic subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1115
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 179/392 (45%), Gaps = 48/392 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D I E FS+
Sbjct: 320 GRKGIFPEANVDPVIQIANVVTRYGEQKPFVRNVFCLDTVSPI-VSTEIFSY-------- 370
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TE 407
+E E+ + + V Q DPD++IGY I + YLL+R L L +R+ ++
Sbjct: 371 -QSEGEMLMKWRDFVEQVDPDVIIGYNINNFDFPYLLDRAKHLKLQKFPYWTRLKTVQSK 429
Query: 408 VEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--L 462
VE + S ++ N + GR+ ++L +L++ + +L+SYT ++ H L E+
Sbjct: 430 VESSHFSSKQLGNRDTKTTNTNGRLQLDLLQLIQRDHHLRSYTLNSVCAHFLKEQKEDVH 489
Query: 463 HSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
HS +L R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 490 HSMITELFNGDCNSRRRLAVYCLKDAYLPQ-----RLLDKLMCLVNYTEMARVTGVPFNY 544
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q R S + R + + + P + + ++EP+ Y DP+ L
Sbjct: 545 ILSRGQQIRFISQLFRKALDHQLII--PDLPNQGDSNDQYEGATVIEPKRGYYRDPVATL 602
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPS 639
DF SLYPS++ A+N C++T L + ++ LK K ++ ++P
Sbjct: 603 DFASLYPSIMQAHNLCYTTWLDK------------------QTVEKLKMKKDEDYIVTPH 644
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G F R G+L ++L+E+L R K+ +
Sbjct: 645 GDMFCTAKTRKGLLTEILEEVLSARKKAKREL 676
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y DP+ LDF SLYPS++ A+N C++T L +
Sbjct: 595 YRDPVATLDFASLYPSIMQAHNLCYTTWLDK 625
>gi|260946881|ref|XP_002617738.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
gi|238849592|gb|EEQ39056.1| hypothetical protein CLUG_03182 [Clavispora lusitaniae ATCC 42720]
Length = 655
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 32/324 (9%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE + P IQ+ V ++ F+ NV + +IG EI FS
Sbjct: 340 GRKGVFPEAQLDPVIQIANVISKHGESRPFVRNVFTVNTCSPIIGSEI--FSH------- 390
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQ 400
+ E+++ + + V + DPD+LIGY YLL+R LGL N+ Q
Sbjct: 391 --AKEEDMLMAWRKFVVKADPDVLIGYNTSNFDLPYLLDRAKALGLPKFPYFGRMFNIKQ 448
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
E + +R+ N + + GR+ ++L + ++ E L+SYT ++ H L E+
Sbjct: 449 EAKDAVFSSRAYGTRE---NKVVNIDGRMQLDLLQFIQREYKLRSYTLNSVSAHFLGEQK 505
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFY 519
++T E + + V Y ++ + +RL+E+L + +EMAR+ G+ F
Sbjct: 506 EDVQHSIITDLQEGTAETRRRLAV--YCLKDAYLPLRLLEKLMCLVNYTEMARVTGVPFS 563
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q +V S + R N V P+++ E +I EP Y PI
Sbjct: 564 YLLARGQQIKVISQLFRKCLEENIVV--PNMRSEGSNEEYEGATVI-EPIRGYYDVPIAT 620
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGR 603
LDF SLYPS+++A+N C++T L +
Sbjct: 621 LDFSSLYPSIMMAHNLCYTTLLNK 644
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 614 YDVPIATLDFSSLYPSIMMAHNLCYTTLLNK 644
>gi|169615194|ref|XP_001801013.1| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
gi|160702905|gb|EAT82147.2| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
Length = 1115
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 181/393 (46%), Gaps = 50/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V F+ NV D ++ +I +FS
Sbjct: 320 GRKGIFPEPNVDPVIQIANVVTRSGESKPFVRNVFCMDTVSPIVATQILSFS-------- 371
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----T 406
NE E+ + + + + DPD++IGY + YLL+R L L SR+ T
Sbjct: 372 ---NEGEMLMKWRDFLEEVDPDVIIGYNTSNFDFPYLLDRAKHLKLPKFPYWSRLKSVQT 428
Query: 407 EVEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+V+ N S ++ N + GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 429 KVQTSNFSSKQLGNRDTKTANTNGRLQLDLLQLIQRDHQLRSYTLNSVCAHFLKEQKEDV 488
Query: 464 SWKLLTCWWEHRTHLYKWMTV----EHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T + ++ + + V + YL + RL+++L + +EMAR+ G+ F
Sbjct: 489 HHSMITELYNGDSNSRRRLAVYCLKDAYLPQ-----RLLDKLMCLVNYTEMARVTGVPFN 543
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q R S + R + + + P + + ++EP+ Y P+
Sbjct: 544 YILARGQQIRFVSQLFRKALDHQLIV--PDLPNQGDNGDQYEGATVIEPKRGYYKQPVAT 601
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISP 638
LDF SLYPS++ A+N C++T L R ++ LK K ++ ++P
Sbjct: 602 LDFASLYPSIMQAHNLCYTTWLDR------------------QTVEKLKMKKDEDYIVTP 643
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F R G+L ++L+E+L R K+ +
Sbjct: 644 NGDMFCTAKTRKGLLSQILEELLGARKRAKKEL 676
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y P+ LDF SLYPS++ A+N C++T L R
Sbjct: 595 YKQPVATLDFASLYPSIMQAHNLCYTTWLDR 625
>gi|449017897|dbj|BAM81299.1| DNA polymerase delta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1084
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 158/335 (47%), Gaps = 38/335 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK- 410
++ E+EL F + DPDI+ GY I YLL R +G + L RI
Sbjct: 345 LNREQELLQSFRNFLVAADPDIITGYNIVNFDLPYLLNRASAIGASRFPYLGRICRERTT 404
Query: 411 ------RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+S+ ++ + GR+++++ +++ + L+SY+ ++ L+E+
Sbjct: 405 MRRTRLSSSAFGTHESMTFSIEGRVIMDMLQVIIRDHKLRSYSLNSVSSEFLNEQKEDVH 464
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ ++T H + + V Y ++ + +RL+++L + E+AR+ G+ +LS
Sbjct: 465 YSIITDLQAGNEHTRRRLAV--YCLKDAYLPLRLMDKLMSLTNYMELARVTGVPLDWLLS 522
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP-----LILEPESRLYTDPII 578
RG +V S++ R + + + V + A R+ + P ++EP+ Y PI
Sbjct: 523 RGHMVKVVSLLHRKAHEADLL-VPDLPRTEAGGRSGDGGPQYEGATVIEPKKGFYRTPIA 581
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI-S 637
+DF SLYPS+++AYN C+ST V + KL+ + I +
Sbjct: 582 TMDFASLYPSIMMAYNLCYSTL---------------------VHESDVPKLKPDDYIRT 620
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
P G FV S+R GIL +ML+E L +R K+ M+
Sbjct: 621 PLGHCFVKPSVRKGILSEMLEEFLASRKAAKRDMQ 655
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 83 PSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P R RS + ++ + Y PI +DF SLYPS+++AYN C+ST
Sbjct: 545 PDLPRTEAGGRSGDGGPQYEGATVIEPKKGFYRTPIATMDFASLYPSIMMAYNLCYST 602
>gi|452845568|gb|EME47501.1| hypothetical protein DOTSEDRAFT_50888 [Dothistroma septosporum
NZE10]
Length = 1104
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 178/395 (45%), Gaps = 55/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F +G
Sbjct: 317 GRKGVFPEANVDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLI-VNTQIFEFGA------ 369
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE-- 409
E+++ + + V + DPD++IGY I + YLL+R L + L+R+ V+
Sbjct: 370 ---EEKMLMAWRDFVEEVDPDVIIGYNISNFDFPYLLDRAAFLKVGRFPFLTRLRNVKSM 426
Query: 410 --------KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERI 460
K+ +RD + NT GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 427 AKDTNFSSKQMGNRDTKATNTN----GRLQLDLLQLIQRDYQLRSYTLNSVSAHFLSEQK 482
Query: 461 PLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGI 516
++T + E R L + + YL + RL+++L + +EMAR+ G+
Sbjct: 483 EDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGV 537
Query: 517 QFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
F +LS+G Q + S + R + V P +K E +I EP Y P
Sbjct: 538 PFNFLLSKGQQIKFISQLFRKALEQQLVV--PDLKSEGSDEQYEGATVI-EPTRGYYDVP 594
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
+ LDF SLYPS+I A+N C++T L + N + K + +
Sbjct: 595 VATLDFASLYPSIIQAHNLCYTTLLNK-----------------NAVEKMQLKKDDDYIV 637
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+P+G F +R G+L ++L+E+L R K+ +
Sbjct: 638 TPNGDLFATTKVRKGLLSQILEELLGARKRAKKEL 672
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y P+ LDF SLYPS+I A+N C++T L +
Sbjct: 591 YDVPVATLDFASLYPSIIQAHNLCYTTLLNK 621
>gi|409040940|gb|EKM50426.1| hypothetical protein PHACADRAFT_104509 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1068
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 179/396 (45%), Gaps = 53/396 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE + P IQ+ + + FI NV ++G ++ +F
Sbjct: 280 GRKGIFPEPQVDPVIQIASMVTRQGETHPFIRNVFTLSTCSHIVGSQVLSFD-------- 331
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E ++ + + + V + DPD++IGY I YL++R + L R+ EV+
Sbjct: 332 ---SEVDMLNAWRDFVNEIDPDVIIGYNIANFDLPYLIDRAIAVKAKDFPMLGRMIEVKA 388
Query: 411 RN-----SSR--DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP-- 461
+ SS+ + + + + GR+ I++ + ++ E L+SYT ++ L E+
Sbjct: 389 QTKETHFSSKAFGQRDSKETALDGRLQIDILQYMQREHKLRSYTLNSVCAQFLGEQKEDV 448
Query: 462 LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
HS +L E R L + + YL + RL+++L EMAR+ G+ F
Sbjct: 449 HHSVITELQNGGPESRRRLAVYCLKDAYLPQ-----RLMDKLMCFINYIEMARVTGVPFN 503
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+LSRG +V S + R + +V P+++ E +I EP Y PI
Sbjct: 504 YLLSRGQSIKVLSQLFRKANEEEYVV--PALRGEGTDEQYEGATVI-EPHKGYYKAPIAT 560
Query: 580 LDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS+++A+N C++T L G ++ LG+ + +
Sbjct: 561 LDFASLYPSIMMAHNLCYTTLLDKGTIDRLGLEKDVDY-------------------IQT 601
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
P+ F R G+LP +L++++ TR K +K+
Sbjct: 602 PNNDFFATAKRRKGLLPIILEDLISTRKRAKADLKK 637
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGV 147
Y PI LDF SLYPS+++A+N C++T L G ++ LG+
Sbjct: 554 YKAPIATLDFASLYPSIMMAHNLCYTTLLDKGTIDRLGL 592
>gi|384484631|gb|EIE76811.1| hypothetical protein RO3G_01515 [Rhizopus delemar RA 99-880]
Length = 539
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 82/116 (70%), Gaps = 5/116 (4%)
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCID-LNVSIRSLKKLQQNLT 635
+ VLDFQSLYPS++IAYNYC+STCLGRV+ +S FG ++ ++ L+ L+ +
Sbjct: 1 MAVLDFQSLYPSIMIAYNYCYSTCLGRVKK--PEESSRFGVLESFDLPDGLLESLKDYIN 58
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
ISP+GV FV IR G+L KMLQE+L+TR+MVK+SMK+YK L L ML++ L
Sbjct: 59 ISPNGVMFVKHEIRKGLLGKMLQELLNTRVMVKKSMKDYKDDPGL--LRMLDAKQL 112
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 8/52 (15%)
Query: 115 IIVLDFQSLYPSVIIAYNYCFSTCLGRVE------HLGVSDSF--PFGCIAS 158
+ VLDFQSLYPS++IAYNYC+STCLGRV+ GV +SF P G + S
Sbjct: 1 MAVLDFQSLYPSIMIAYNYCYSTCLGRVKKPEESSRFGVLESFDLPDGLLES 52
>gi|336472726|gb|EGO60886.1| hypothetical protein NEUTE1DRAFT_120002 [Neurospora tetrasperma
FGSC 2508]
gi|350294031|gb|EGZ75116.1| DNA polymerase delta catalytic subunit [Neurospora tetrasperma FGSC
2509]
Length = 1104
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 38/320 (11%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQ--ELSRITEVEKR-NSSRDEV 418
F+E V DPDI+IGY I + YLL+R L + +R+ V K N S ++
Sbjct: 380 FLEQV---DPDIIIGYNIANFDFPYLLDRAKHLKVKDFDFWSRTRVRSVAKETNFSSKQM 436
Query: 419 KNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE-- 473
N + + GR+ +++ +L++ + L+SYT ++ H L E+ ++T +E
Sbjct: 437 GNRDTKATNINGRLQLDMLQLVQRDYQLRSYTLNSVCSHFLGEQKEDVHHSMITELFEGT 496
Query: 474 --HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
R L + + YL + RL+++L + +EMAR+ G+ F +L+RG Q +
Sbjct: 497 PESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFL 551
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S + R + V P+++ + E +I EP Y PI LDF SLYPS++
Sbjct: 552 SQLFRKALEQKLVI--PNLRPESSEEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIMQ 608
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
A+N C++T + + ++ LKK ++ ++P+G FV R G
Sbjct: 609 AHNLCYTTLIKK----------------RDIERWDLKK-DEDYIVTPNGDMFVTTKQRKG 651
Query: 652 ILPKMLQEILDTRLMVKQSM 671
+L ++L+E+L R K+ +
Sbjct: 652 LLAQILEELLSARKQAKREL 671
>gi|303275346|ref|XP_003056969.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461321|gb|EEH58614.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1067
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 49/340 (14%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLG----------LNLNQEL 402
++E+EL + + +R DPD+LIGY I + YL+ R LG + +
Sbjct: 331 TDERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINRAATLGVEDFPYWGRMIGSKLRM 390
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP- 461
T K +RD + ++ + GR+ +L + ++ + L SY+ + H L E+
Sbjct: 391 KDTTFSSKAYGTRD---SKEITIEGRVQFDLLQAVQRDHKLSSYSLNAVSAHFLGEQKED 447
Query: 462 -LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
HS +L E R L + + YL + RL+++L ++ EMAR+ G+
Sbjct: 448 VHHSAISELQAGTSETRRRLAVYCLKDAYLPQ-----RLLDKLMYMYNYIEMARVTGVPL 502
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL-----PLILEPESRLY 573
+LSRG +V S +LR +R + P + ++ E +L+ ++ Y
Sbjct: 503 SFLLSRGQSIKVLSQILRKARQRGLLV--PHMPKKGASDQQEGGVAYEGATVLDAKAGYY 560
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C+ T V VS P ++
Sbjct: 561 ELPIATLDFASLYPSIMMAHNLCYCTL---VPQNMVSRMNP-----------------ED 600
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
++ SP+G FV + GILP++L+E+L R K +K+
Sbjct: 601 VSKSPTGDVFVKSNKTKGILPEILEELLSARKRAKADLKK 640
>gi|85103616|ref|XP_961558.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
gi|18376276|emb|CAD21389.1| probable DNA-directed DNA polymerase III [Neurospora crassa]
gi|28923105|gb|EAA32322.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
Length = 1104
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 155/320 (48%), Gaps = 38/320 (11%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQ--ELSRITEVEKR-NSSRDEV 418
F+E V DPDI+IGY I + YLL+R L + +R+ V K N S ++
Sbjct: 380 FLEQV---DPDIIIGYNIANFDFPYLLDRAKHLKVKDFDFWSRTRVRSVAKETNFSSKQM 436
Query: 419 KNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE-- 473
N + GR+ +++ +L++ + L+SYT ++ H L E+ ++T +E
Sbjct: 437 GNRDTKATNTNGRLQLDMLQLVQRDYQLRSYTLNSVCSHFLGEQKEDVHHSMITELFEGT 496
Query: 474 --HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
R L + + YL + RL+++L + +EMAR+ G+ F +L+RG Q +
Sbjct: 497 PESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFL 551
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S + R + V P+++ + E +I EP Y PI LDF SLYPS++
Sbjct: 552 SQLFRKALEQKLVI--PNLRPESSEEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIMQ 608
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
A+N C++T + + ++ LKK ++ ++P+G FV R G
Sbjct: 609 AHNLCYTTLIKK----------------RDIERWDLKK-DEDYIVTPNGDMFVTTKQRKG 651
Query: 652 ILPKMLQEILDTRLMVKQSM 671
+L ++L+E+L R K+ +
Sbjct: 652 LLAQILEELLSARKQAKREL 671
>gi|322703524|gb|EFY95132.1| DNA polymerase delta catalytic subunit [Metarhizium anisopliae
ARSEF 23]
Length = 1104
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 35/331 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR-- 411
E+ + S + + + + DPDI+IGY I + YLLER L ++ + SR+ V R
Sbjct: 367 KEERMLSEWQQFLIRADPDIIIGYNIANFDFPYLLERAKHLKVSGFEYWSRLPSVPSRVK 426
Query: 412 --NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
N S ++ N + GR+ ++L +L++ + +L+SYT ++ H L E+
Sbjct: 427 ETNFSSKQIGNRDTKATNTNGRLQLDLLQLIQRDHHLRSYTLNSVCAHFLGEQKEDVHHT 486
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + E R L + + YL + RL+++L + +EMAR+ G+ F +L
Sbjct: 487 MITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLL 541
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q + S + R + V P+I+ A E +I EP Y PI LDF
Sbjct: 542 SRGQQIKFVSQLFRKALEQKLVI--PNIRSDASDEQYEGATVI-EPVRGYYDVPIATLDF 598
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C++T + + + FG + ++ ++P+G
Sbjct: 599 ASLYPSIIQAHNLCYTTLVKDKKLIE-----KFGLVK-----------DEDYIVTPNGDT 642
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV R G+L ++L+E+L R K+ + +
Sbjct: 643 FVTTKQRKGLLAQILEELLTARKQAKRELAQ 673
>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
Length = 1147
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 189/436 (43%), Gaps = 75/436 (17%)
Query: 247 VLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPI 306
+L+V+I R PD +D V I + TC +DR + + ++ P V +
Sbjct: 349 ILSVDIECAGRKGHFPDADHDPVIQI-ATMVTCQ-GDDRPIIKAIWTLDTCAPIVGADVL 406
Query: 307 QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENV 366
+E+EL ++ + +R DPD+LIGY I F + YL+ R N +E+
Sbjct: 407 SFK---DERELLRSWGKFLRSTDPDLLIGYNIVNFDFPYLINRAERLN--------VEDF 455
Query: 367 RQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMP 426
W G ++G L + T K +RD + ++ +
Sbjct: 456 AYW---------------------GRMIGSKL--RMKDTTFSSKAYGTRD---SKEITIE 489
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHSW--KLLTCWWEHRTHLYKWM 482
GR+ +L + ++ + L SY+ + H L E+ HS +L E R L +
Sbjct: 490 GRVQFDLLQAVQRDHKLSSYSLNAVSAHFLGEQKEDVHHSAISELQAGTAETRRRLAVYC 549
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
+ YL + RL+++L ++ EMAR+ G+ +L+RG +V S +LR ++
Sbjct: 550 LKDAYLPQ-----RLLDKLMYMYNYIEMARVTGVPLSFLLARGQSIKVLSQILRKAKQRG 604
Query: 543 FVAVSPSIKQRAHMRAPES-----LPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+ P I ++ + +L+ ++ Y P+ LDF SLYPS+++A+N C+
Sbjct: 605 LLV--PHIAKKGGGEQADGGVAYEGATVLDAKAGYYEMPVATLDFASLYPSIMMAHNLCY 662
Query: 598 STCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKML 657
ST + R D F +++T +P G FV GILP++L
Sbjct: 663 STLVPR-------DRVQF-------------MASEDVTRTPCGDTFVKSHKEKGILPEIL 702
Query: 658 QEILDTRLMVKQSMKE 673
E+L R K +K+
Sbjct: 703 TELLSARKRAKADLKK 718
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y P+ LDF SLYPS+++A+N C+ST + R
Sbjct: 638 YEMPVATLDFASLYPSIMMAHNLCYSTLVPR 668
>gi|302497097|ref|XP_003010549.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae
CBS 112371]
gi|291174092|gb|EFE29909.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae
CBS 112371]
Length = 1111
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 50/327 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKR 411
F+E V DPD++IGY I + YLL+R L + ++ + K+
Sbjct: 386 FVEKV---DPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWSRLKGVQSHATKTSFASKQ 442
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
RD + NT GRI ++L +L++ + +L+SYT ++ L E+ ++T
Sbjct: 443 MGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 498
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +L+RG
Sbjct: 499 LYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLARGQ 553
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P +K + ++EP Y PI LDF SLY
Sbjct: 554 QIKFISQLFRKALEQKLVI--PDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLDFASLY 611
Query: 587 PSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+I A+N C++T L + VE LG+ K ++ ++P+ F
Sbjct: 612 PSIIQAHNLCYTTLLSKRTVEKLGL-------------------KKGEDYIVTPNDDMFC 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
IR G+L ++L+E+L R K+ +
Sbjct: 653 TAKIRKGLLSQILEELLTARKRAKREL 679
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 598 YPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTVEKLGL 636
>gi|239607450|gb|EEQ84437.1| DNA polymerase delta subunit [Ajellomyces dermatitidis ER-3]
Length = 1106
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 176/393 (44%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F F
Sbjct: 319 GRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLI-VNTQLF--------EF 369
Query: 352 VSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQEL 402
+ EK L + F+E V DPD++IGY I + YLL+R G+ L
Sbjct: 370 DAEEKMLMAWRDFLEEV---DPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFWSRLKHIA 426
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
SR+ + + ++ + GRI ++L +L++ + L+SYT ++ L E+
Sbjct: 427 SRVGDARFSSKQIGNRESKSTNISGRIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKED 486
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 487 VHHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPF 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q + S + R + V P+++ + E +I EP Y PI
Sbjct: 542 NFLLSRGQQVKFLSQLFRKALEQQLVI--PNLRNESTSEQYEGATVI-EPIRDYYDVPIA 598
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+I A+N C++T L + ID + K ++ ++P
Sbjct: 599 TLDFASLYPSIIQAHNLCYTTLLKK------------STIDTHQM-----KEGEDYIVTP 641
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 642 NGDRFCTSKVRKGLLTQILEELLGARKRAKKEL 674
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P +N+ST ++ RD Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 569 PNLRNESTSEQYEGATV-IEPIRD-YYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 623
>gi|261200399|ref|XP_002626600.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
gi|239593672|gb|EEQ76253.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1106
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 176/393 (44%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F F
Sbjct: 319 GRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLI-VNTQLF--------EF 369
Query: 352 VSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQEL 402
+ EK L + F+E V DPD++IGY I + YLL+R G+ L
Sbjct: 370 DAEEKMLMAWRDFLEEV---DPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFWSRLKHIA 426
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
SR+ + + ++ + GRI ++L +L++ + L+SYT ++ L E+
Sbjct: 427 SRVGDARFSSKQIGNRESKSTNISGRIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKED 486
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 487 VHHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPF 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q + S + R + V P+++ + E +I EP Y PI
Sbjct: 542 NFLLSRGQQVKFLSQLFRKALEQQLVI--PNLRNESTSEQYEGATVI-EPIRDYYDVPIA 598
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+I A+N C++T L + ID + K ++ ++P
Sbjct: 599 TLDFASLYPSIIQAHNLCYTTLLKK------------STIDTHQM-----KEGEDYIVTP 641
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 642 NGDRFCTSKVRKGLLTQILEELLGARKRAKKEL 674
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P +N+ST ++ RD Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 569 PNLRNESTSEQYEGATV-IEPIRD-YYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 623
>gi|326480238|gb|EGE04248.1| DNA polymerase delta catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1111
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 50/327 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKR 411
F+E V DPD++IGY I + YLL+R L + ++ + K+
Sbjct: 386 FVEKV---DPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWSRLKGVQSHATKTSFASKQ 442
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
RD + NT GRI ++L +L++ + +L+SYT ++ L E+ ++T
Sbjct: 443 MGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 498
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +L+RG
Sbjct: 499 LYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLARGQ 553
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P +K + ++EP Y PI LDF SLY
Sbjct: 554 QIKFISQLFRKALEQKLVI--PDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLDFASLY 611
Query: 587 PSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+I A+N C++T L + VE LG+ K ++ ++P+ F
Sbjct: 612 PSIIQAHNLCYTTLLNKRTVEKLGL-------------------KKDEDYIVTPNDDMFC 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++L+E+L R K+ +
Sbjct: 653 TAKVRKGLLSQILEELLTARKRAKREL 679
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 598 YPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEKLGL 636
>gi|327352438|gb|EGE81295.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1106
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 176/393 (44%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F F
Sbjct: 319 GRKGVFPEANQDPVIQIANVVTRYGESKPFVRNVFVLDTCSLI-VNTQLF--------EF 369
Query: 352 VSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLER-------GYVLGLNLNQEL 402
+ EK L + F+E V DPD++IGY I + YLL+R G+ L
Sbjct: 370 DAEEKMLMAWRDFLEEV---DPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFWSRLKHIA 426
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
SR+ + + ++ + GRI ++L +L++ + L+SYT ++ L E+
Sbjct: 427 SRVGDARFSSKQIGNRESKSTNISGRIQLDLLQLIQRDYQLRSYTLNSVCAQFLGEQKED 486
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 487 VHHTMITELFNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPF 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q + S + R + V P+++ + E +I EP Y PI
Sbjct: 542 NFLLSRGQQVKFLSQLFRKALEQQLVI--PNLRNESTSEQYEGATVI-EPIRDYYDVPIA 598
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+I A+N C++T L + ID + K ++ ++P
Sbjct: 599 TLDFASLYPSIIQAHNLCYTTLLKK------------STIDTHQM-----KEGEDYIVTP 641
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 642 NGDRFCTSKVRKGLLTQILEELLGARKRAKKEL 674
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P +N+ST ++ RD Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 569 PNLRNESTSEQYEGATV-IEPIRD-YYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 623
>gi|322693697|gb|EFY85548.1| DNA polymerase delta catalytic subunit [Metarhizium acridum CQMa
102]
Length = 1104
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 35/331 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR-- 411
E ++ S + + + + DPDI+IGY I + YLLER L ++ + SR+ V R
Sbjct: 367 KEDKMLSEWQQFLIRADPDIIIGYNIANFDFPYLLERAKHLKVSGFEYWSRLPSVPSRVK 426
Query: 412 --NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
N S ++ N + GR+ ++L +L++ + +L+SYT ++ H L E+
Sbjct: 427 ETNFSSKQIGNRDTKATNTNGRLQLDLLQLIQRDHHLRSYTLNSVCAHFLGEQKEDVHHT 486
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + E R L + + YL + RL+++L + +EMAR+ G+ F +L
Sbjct: 487 MITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLL 541
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q + S + R + V P+I+ A E +I EP Y PI LDF
Sbjct: 542 SRGQQIKFVSQLFRKALEQKLVI--PNIRSDASDEQYEGATVI-EPVRGYYDVPIATLDF 598
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C++T + + + FG + ++ ++P+G
Sbjct: 599 ASLYPSIIQAHNLCYTTLVKDKKLIE-----KFGLVK-----------DEDYIVTPNGDT 642
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV R G+L ++L+E+L R K+ + +
Sbjct: 643 FVTTKQRKGLLAQILEELLTARKQAKRELAQ 673
>gi|302911020|ref|XP_003050401.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731338|gb|EEU44688.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1104
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 151/315 (47%), Gaps = 40/315 (12%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR----NSSRDEVKNTQLQM 425
DPDI+ GY I + YLL+R L ++ + +RI V + N S ++ N +
Sbjct: 384 DPDIITGYNISNFDFPYLLDRARHLKVSGFEYWTRIPSVASKAKETNFSSKQMGNRDTKA 443
Query: 426 P---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRTHL 478
GR+ +++ +L++ + +L+SYT ++ + L E+ ++T + E R L
Sbjct: 444 TNTNGRLQLDMLQLIQRDHHLRSYTLNSVCANFLGEQKEDVHHTMITELFNGTPESRRRL 503
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R +
Sbjct: 504 ALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFISQLFRKA 558
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
V P++K E +I EP Y PI LDF SLYPS++ A+N C++
Sbjct: 559 LEQKLVI--PNLKSEVSDEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIMQAHNLCYT 615
Query: 599 TCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
T + + +E G+ ++ ++P+G FV R G+L ++
Sbjct: 616 TLVSKKAIEAFGLQKD-------------------EDYIVTPNGDTFVTVKQRKGLLAQI 656
Query: 657 LQEILDTRLMVKQSM 671
L+E+L R K+ +
Sbjct: 657 LEELLAARKQAKREL 671
>gi|443924628|gb|ELU43623.1| DNA polymerase delta catalytic subunit [Rhizoctonia solani AG-1 IA]
Length = 1003
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 181/401 (45%), Gaps = 64/401 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE P IQ+ N V+ + E S F+ NV D ++G ++ +F
Sbjct: 318 GRKGIFPEASIDPVIQIANMVTVQGE-SSPFVRNVFTLDDCAHIVGSDVISFK------- 369
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLG--------LNLNQE 401
NE + + V + DPD++IGY I YLL+R L L +
Sbjct: 370 ----NEDAMLLAWRAFVEEVDPDVVIGYNIANFDLPYLLDRARALKGASDGFPHLGHYKT 425
Query: 402 LSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
++ T + + + K TQL GR+ +++ + ++ E L+SYT + H L E+
Sbjct: 426 TTKDTHFSSKAFGQRDSKETQLN--GRLQLDMLQYMQREQKLRSYTLNAVCAHFLGEQKE 483
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII---RLIEQLDFIGRTSEMARLFGIQF 518
++T + + V Y ++V RL+++L +EMAR+ G+ F
Sbjct: 484 DVHHSVITDLQNGNAETRRRLAV--YCLKVWDAYLPQRLMDKLMCFVNYTEMARVTGVPF 541
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYT 574
+L +G Q +V S + R + + +V P++K E + + ++EP+ Y
Sbjct: 542 NYLLQKGQQIKVISQLYRKANADGYVI--PNMK-------AEGMGILCATVIEPKRGYYD 592
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
PI LDF SLYPS+++A+N C++T L + +E G+ +
Sbjct: 593 VPIATLDFSSLYPSIMMAHNLCYTTLLYKETIEQHGLVKG-------------------E 633
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ +P+ FV R G+LP +L++++ R K +K+
Sbjct: 634 DYIQTPNNDFFVTAKRRKGLLPTILEDLIAARKRAKADLKK 674
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C++T L
Sbjct: 591 YDVPIATLDFSSLYPSIMMAHNLCYTTLL 619
>gi|168023037|ref|XP_001764045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684784|gb|EDQ71184.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 161/351 (45%), Gaps = 55/351 (15%)
Query: 355 EKELFSIFIENVRQW--------DPDILIGYEIETLSWGYLLERGYVLGL---NLNQELS 403
E +F I +R W DPDI+ Y+++ S YL ER VL L +L + +
Sbjct: 463 ELRMFDSEIVMLRAWHKYWYLEVDPDIVCVYQMKK-SLRYLAERFKVLKLGTFDLGRRMG 521
Query: 404 RITEV-------------EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFEN 450
+ TEV + R SS + + M GR+VI++ R++ NL ++T E
Sbjct: 522 QTTEVKSVVTYGKHWIKKQARMSSTSNQEVFRAYMEGRLVIDMLRVVLVSFNLSTFTLEE 581
Query: 451 IMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEM 510
L S ++ W+ + + + + + L +++L+E+L I T EM
Sbjct: 582 CSQVFLGAPKEALSTAAVSELWQGKYGGLRRLLL-YSLHEAEVVLKLMERLQTIPETVEM 640
Query: 511 ARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE- 569
AR+ G+ +VL + R++S++LR +R ++ ++ + + ES P +L P+
Sbjct: 641 ARVTGLTLSDVLYKAQMVRIQSLLLRSARKEGWLLGGTTL----NGQLSES-PFLLHPKD 695
Query: 570 ---SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRS 626
+ Y DP+ +LDF SLYPS+ +AYN C++T + H + S P
Sbjct: 696 NHTAAFYQDPVAILDFASLYPSLFMAYNLCYTTLV----HPEDAKSIP------------ 739
Query: 627 LKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFS 677
L S +G FV S+R G+LP++ ++ R + M + S
Sbjct: 740 ----SHQLITSLTGAQFVVSSVRRGVLPRICGALITARKQARDRMTQEHIS 786
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ P + Y DP+ +LDF SLYPS+ +AYN C++T
Sbjct: 691 LHPKDNHTAAFYQDPVAILDFASLYPSLFMAYNLCYTT 728
>gi|156086780|ref|XP_001610797.1| DNA polymerase delta subunit [Babesia bovis T2Bo]
gi|154798050|gb|EDO07229.1| DNA polymerase delta subunit [Babesia bovis]
Length = 1065
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 157/336 (46%), Gaps = 43/336 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT------ 406
+NE L + + DPD L GY I YL+ R L L +L RIT
Sbjct: 334 ANEAALLMAWKQFFIAVDPDFLTGYNIINFDIPYLINRANALKLPEFTQLPRITRSKSSV 393
Query: 407 -EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER------ 459
++ N++ +N ++ + GRI+ +++ L+R + L+SYT + + L ++
Sbjct: 394 RDIISSNNTMGTFENKEINIEGRILFDVYDLVRRDHKLKSYTLNYVSFEFLKQQKEDVHH 453
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
+ +L + R Y ++ ++ + I +L+ +++ EMAR+
Sbjct: 454 STMSKLQLGSAADRRRIASY---CLKDSVLPLLLIDKLLLLFNYV----EMARVTSTPIK 506
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA-HMRAPESLPLILEPESRLYTDPII 578
++SRG Q RV + R +L + S + QRA + A +LEP+ + + I
Sbjct: 507 MLISRGQQIRVTMQIYRQCKLMGYAVPSVNAAQRAANSEASYEGATVLEPKKGYHRNAIA 566
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
VLDFQSLYPS++IA+N C+ST + + + +P ++LT P
Sbjct: 567 VLDFQSLYPSIMIAHNLCYSTLVPPAD----ASKYP----------------AEDLTTVP 606
Query: 639 S--GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G+ F+ +R G+LP +++ +++ R K+ MK
Sbjct: 607 GHPGLYFIKAHVRKGMLPLIVERLIEARKKAKEEMK 642
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ + I VLDFQSLYPS++IA+N C+ST
Sbjct: 561 HRNAIAVLDFQSLYPSIMIAHNLCYST 587
>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
Length = 913
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 56/406 (13%)
Query: 298 LPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKE 357
+P T PI M VS FS E D +L+ +E S SNE +
Sbjct: 197 MPTPETSPIIMLSVS-----FSPAYEG---HDAIVLVSKTVEGVSGNV----ETFSNEAD 244
Query: 358 LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN----S 413
+ + F E +Q+DPDI+ GY I Y+++R +L N +S + V R+ S
Sbjct: 245 MLNRFFEVFQQYDPDIIGGYNILDFDIPYIVDRVSIL----NDPVSIVKPVTGRDGRLLS 300
Query: 414 SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH-ERIPLHSWKLLTCWW 472
R T + MPGR+V++ L+R + +L+ YT N+ +L E++ + ++ W
Sbjct: 301 YRKIGTRTMVSMPGRVVVDALPLVRSQYSLKRYTLRNVAKELLEMEKLDIAPSEMEDHWN 360
Query: 473 EHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ + +++ Y R + + + L+ +L + + +A++ G EV+ G V+
Sbjct: 361 DSGEKILRFI---DYAQRDSDLAMELLMKLRLLDKYIAVAQVSGSLLQEVVDGGQTSMVD 417
Query: 532 SIMLR-LSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYTDPIIVLDFQSLY 586
+++LR + + + PS R S L +LEP+ L + II++D++SLY
Sbjct: 418 NLLLREYGKRDRVIPPKPS-DDEVSFRNLSSEGLKGGEVLEPKKGLLEN-IIIMDYKSLY 475
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
P++++A+N C++T V P G ++K PSG FV
Sbjct: 476 PTIMMAHNLCYTTV--------VEKDRPKG--------ETIK--------PPSGGEFVPA 511
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+ G++P +L+ +L+ R+ K+ M+ E R L L I
Sbjct: 512 EVFKGVMPAILENLLNRRIETKKRMRSAATEEEHRVLDATQLALKI 557
>gi|341883861|gb|EGT39796.1| hypothetical protein CAEBREN_11294 [Caenorhabditis brenneri]
Length = 523
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 9/129 (6%)
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL-------G 608
M +PE L LILEP+S++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L
Sbjct: 1 MGSPEQLQLILEPQSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKISNLIQMNNESR 60
Query: 609 VSDSFPFGCIDLNVSIRSLKKL--QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLM 666
+ G I S K+ + + SP FV KS R G++P +L+EIL R+M
Sbjct: 61 NREEIVLGAIKYYPSKDDFVKMVAYKEVCASPLASMFVKKSKREGVVPLLLREILAARIM 120
Query: 667 VKQSMKEYK 675
VK +MK K
Sbjct: 121 VKNAMKRVK 129
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 35/39 (89%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
+ ++Y DP+IVLDFQSLYPS++IAYNYC+ST LG++ +L
Sbjct: 14 QSKVYFDPVIVLDFQSLYPSMVIAYNYCYSTILGKISNL 52
>gi|358401350|gb|EHK50656.1| hypothetical protein TRIATDRAFT_53190 [Trichoderma atroviride IMI
206040]
Length = 1103
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 154/321 (47%), Gaps = 48/321 (14%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE----------VEKRNSSRD-EV 418
DPD++ GY I + YLL+R L + + SRI K+ SRD +
Sbjct: 383 DPDVITGYNISNFDFPYLLDRAKHLKVQGFEYWSRIPSKPSRVKDTNFTSKQIGSRDTKT 442
Query: 419 KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EH 474
NT GR+ +++ +L++ + +L+SYT ++ L E+ ++T + E
Sbjct: 443 TNTN----GRLQLDMLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNGTPES 498
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
R L + + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S +
Sbjct: 499 RRRLALYCLKDAYLPQ-----RLMDKLSCMENYTEMARVTGVPFNFLLSRGQQIKFVSQL 553
Query: 535 LRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYN 594
R + V P+I + A ++EP Y PI LDF SLYPS+I A+N
Sbjct: 554 FRKALEQKLVI--PNIAPQG-TEAQYEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHN 610
Query: 595 YCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT--ISPSGVAFVDKSIRCGI 652
C++T L G ++ F KL++++ I+P+G FV + R G+
Sbjct: 611 LCYTTLL----RPGDAERF---------------KLEKDVDYIITPNGDQFVTAAKRKGL 651
Query: 653 LPKMLQEILDTRLMVKQSMKE 673
L ++L+E+L R K+ + +
Sbjct: 652 LAQILEELLSARKQAKRELAQ 672
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+I A+N C++T L
Sbjct: 589 YDVPIATLDFASLYPSIIQAHNLCYTTLL 617
>gi|302663472|ref|XP_003023378.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
gi|291187372|gb|EFE42760.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
Length = 1111
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 50/327 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKR 411
F+E V DPD++IGY I + YLL+R L + ++ + K+
Sbjct: 386 FVEKV---DPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWSRLKGVQSHATKTSFASKQ 442
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
RD + NT GRI ++L +L++ + +L+SYT ++ L E+ ++T
Sbjct: 443 MGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 498
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +L+RG
Sbjct: 499 LYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLARGQ 553
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P +K + ++EP Y PI LDF SLY
Sbjct: 554 QIKFISQLFRKALEQKLVI--PDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLDFASLY 611
Query: 587 PSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+I A+N C++T L + VE LG+ K ++ ++P+ F
Sbjct: 612 PSIIQAHNLCYTTLLSKRTVEKLGL-------------------KKGEDYIVTPNDDMFC 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++L+E+L R K+ +
Sbjct: 653 TTKVRKGLLSQILEELLTARKRAKREL 679
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 598 YPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTVEKLGL 636
>gi|168003912|ref|XP_001754656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694277|gb|EDQ80626.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1156
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 59/382 (15%)
Query: 323 ENVRQWDPDILIGYEIETFSWGYLLER-------HFVSNEK--ELFSIFIENVRQWDPDI 373
E V++ DPDI+IGY I F YL+E HF+ +LF I + +V
Sbjct: 378 EFVKEVDPDIIIGYNICKFDLPYLIENKLHYHLVHFLGVLPFLKLFLIALVSVLVLSLAN 437
Query: 374 LIGYEIETLSWGYLLERGYVLGLN-LNQELSRITE---VEKRNSSRDEVKNT-------- 421
+ E+ S+ ++ Y + +N + E + E + + +SR +K+
Sbjct: 438 ISSLEV-LYSYSWITSFAYDIYINSIRAEKLDVVEFPILGRIRNSRVRMKDASFSSRQYG 496
Query: 422 -----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHSW--KLLTCWW 472
+L + GR+ +L + ++ + L SY+ ++ H L E+ HS L
Sbjct: 497 IRESKELTIEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISDLQNGNS 556
Query: 473 EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
E R L + + YL + RL+++L +I EMAR+ G+ +L+RG +V S
Sbjct: 557 ETRRRLAVYCLKDAYLPQ-----RLLDKLMYIYNYVEMARVTGVPISFLLARGQSIKVLS 611
Query: 533 IMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR ++ NFV P++K + + ES +L+ ++ Y PI LDF SLYPS++
Sbjct: 612 QLLRKAKQRNFVL--PNVKSQGVVSG-ESFEGATVLDAKAGYYDKPIATLDFASLYPSIM 668
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
+AYN C+ T L R E L+ + +T +PSG FV S+
Sbjct: 669 MAYNLCYCT-LVRAEDQ-----------------HYLRLEPEQVTKTPSGDMFVKPSLEK 710
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
GILP++L+E+L R K +K
Sbjct: 711 GILPEILEELLAARKRAKADLK 732
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R K + P K++ S + ++ Y PI LDF SLYPS+++A
Sbjct: 611 SQLLRKAKQRNFVLPNVKSQGVVSGESFEGATVLDAKAGYYDKPIATLDFASLYPSIMMA 670
Query: 131 YNYCFST 137
YN C+ T
Sbjct: 671 YNLCYCT 677
>gi|327300054|ref|XP_003234720.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
gi|326463614|gb|EGD89067.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
Length = 1111
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 50/327 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKR 411
F+E V DPD++IGY I + YLL+R L + ++ + K+
Sbjct: 386 FVEKV---DPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWSRLKGVQSHATKTSFASKQ 442
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
RD + NT GRI ++L +L++ + +L+SYT ++ L E+ ++T
Sbjct: 443 MGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 498
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +L+RG
Sbjct: 499 LYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLARGQ 553
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P +K + ++EP Y PI LDF SLY
Sbjct: 554 QIKFISQLFRKALEQKLVI--PDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLDFASLY 611
Query: 587 PSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+I A+N C++T L + VE LG+ K ++ ++P+ F
Sbjct: 612 PSIIQAHNLCYTTLLSKRTVEKLGL-------------------KKGEDYIVTPNDDMFC 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++L+E+L R K+ +
Sbjct: 653 TAKVRKGLLSQILEELLAARKRAKREL 679
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 598 YPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTVEKLGL 636
>gi|403413674|emb|CCM00374.1| predicted protein [Fibroporia radiculosa]
Length = 1060
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 154/323 (47%), Gaps = 39/323 (12%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN-----SSR- 415
F+E V DPD++IGY YL++R + N+ L R+ V+ + SS+
Sbjct: 338 FVEEV---DPDVVIGYNSSNFDLPYLMDRAKAIKANMLPYLGRMNGVKAQTKETHFSSKA 394
Query: 416 -DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP--LHS--WKLLTC 470
+ + + + GR+ I++ + ++ E L+SYT ++ L E+ HS L
Sbjct: 395 FGQRDSKETALDGRLQIDVLQYMQREHKLRSYTLNSVCAQFLGEQKEDVHHSVITDLQNG 454
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
E R L + + YL + RLI++L +EMAR+ G+ F +LSRG +V
Sbjct: 455 GPESRRRLAVYCLKDAYLPQ-----RLIDKLMCFINYTEMARVTGVPFNYLLSRGQSIKV 509
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S + R + + ++ PS+K E +I EP Y PI LDF SLYPS++
Sbjct: 510 LSQLYRKANDDGYII--PSLKGEGSDEQYEGATVI-EPMKGYYDVPIATLDFSSLYPSIM 566
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
+A+N C++T + + ID ++ + +Q +P+ FV S R
Sbjct: 567 MAHNLCYTTLVDK------------KVIDRLHLVKDVDYIQ-----TPNNDFFVTSSKRK 609
Query: 651 GILPKMLQEILDTRLMVKQSMKE 673
G+LP +L++++ R K +K+
Sbjct: 610 GLLPTILEDLIGARKRAKVDLKK 632
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+++A+N C++T + +
Sbjct: 549 YDVPIATLDFSSLYPSIMMAHNLCYTTLVDK 579
>gi|378726376|gb|EHY52835.1| DNA polymerase delta subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 39/321 (12%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR----ITEVEKRNSSRDE 417
F+E V DPD++IGY I + YLL+R L L SR +++ + N S +
Sbjct: 382 FLEKV---DPDVIIGYNIANFDFPYLLDRAKHLKLQKFPYWSRLKSVVSQAKDTNFSSKQ 438
Query: 418 VKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
+ N + GRI ++L +L++ + L+SYT ++ H L E+ ++T +
Sbjct: 439 MGNRDTKATNTNGRIQLDLLQLVQRDHQLRSYTLNSVCAHFLGEQKEDVHHTMITELFNG 498
Query: 473 --EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
+ R L + + YL + RL+++L + +EMAR+ G+ F +LSRG Q +
Sbjct: 499 TPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNYLLSRGQQVKF 553
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S + R + V P+ + E +I EP Y PI LDF SLYPS+I
Sbjct: 554 ISQLFRKALEQQLVI--PNERSEKSDEQYEGATVI-EPIRGYYDVPIATLDFASLYPSII 610
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
A+N C++T L + + + K ++ ++P+G F +R
Sbjct: 611 QAHNLCYTTLLTK-----------------QIIEKHNMKKDEDYILTPNGDLFATAKVRK 653
Query: 651 GILPKMLQEILDTRLMVKQSM 671
G+L ++L+E+L R K+ +
Sbjct: 654 GLLTQILEELLGARKRAKREL 674
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 593 YDVPIATLDFASLYPSIIQAHNLCYTTLLTK 623
>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
Length = 918
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 166/345 (48%), Gaps = 33/345 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E + S F E R++DPD++ GY Y+ +R +L N ++ +S + + +
Sbjct: 237 DEASMLSRFFEIFREYDPDVVTGYNSNDFDIPYVTDRVSILNKNGHRIISDVGRDGRSLA 296
Query: 414 SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHSWKLLTCWW 472
R T + + GR V+++ L+R E +L+ YT N+ + +L E++ + + W
Sbjct: 297 YRKIGTRTMVDITGRAVVDVLPLIRQEFSLKRYTLRNVSHELLGKEKLDVSPQDMEEYWE 356
Query: 473 EHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ LY+++ +Y R + + L+ QL + + ++++ G +V+S G VE
Sbjct: 357 DDGAKLYEFI---NYARRDSELALELLMQLKLLDKHIAVSQVSGTLLQDVISGGQTNMVE 413
Query: 532 SIML-RLSRLNNFVAVSP---SIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
++L + N ++ P + +QR + +LEP L+ + ++VLD++SLYP
Sbjct: 414 QLLLSEYGKQNRVMSSKPDEHTSQQRRKLNENLKGGAVLEPHKGLHEN-VLVLDYKSLYP 472
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
++I+A+N C++T + D N+ +L ISP+G FV
Sbjct: 473 TIIMAHNLCYTTVVE----------------DTNLKT-------DDLIISPTGDKFVKPH 509
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
+ GI+P +L+++L R KQ MK+ + R L L I
Sbjct: 510 LYKGIVPSVLEDLLRRRSETKQIMKKTRDENQHRVLDATQLALKI 554
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 76 SMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCF 135
S KPD+ S R+ + + + P + ++VLD++SLYP++I+A+N C+
Sbjct: 428 SSKPDEHTSQQRRKLNENLKGGAVLEPHKGLHEN-----VLVLDYKSLYPTIIMAHNLCY 482
Query: 136 STCL 139
+T +
Sbjct: 483 TTVV 486
>gi|326473539|gb|EGD97548.1| DNA polymerase family B [Trichophyton tonsurans CBS 112818]
Length = 1085
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 50/327 (15%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKR 411
F+E V DPD++IGY I + YLL+R L + ++ + K+
Sbjct: 386 FVEKV---DPDVIIGYNIANFDFPYLLDRARYLNCLKFPYWSRLKGVQSHATKTSFASKQ 442
Query: 412 NSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
RD + NT GRI ++L +L++ + +L+SYT ++ L E+ ++T
Sbjct: 443 MGKRDSKATNTN----GRIQLDLLQLVQRDHHLRSYTLNSVCAEFLGEQKEDVHHTMITE 498
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ + R L + + YL + RL+++L + +EMAR+ G+ F +L+RG
Sbjct: 499 LYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLARGQ 553
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
Q + S + R + V P +K + ++EP Y PI LDF SLY
Sbjct: 554 QIKFISQLFRKALEQKLVI--PDLKNDDNSNQQYEGATVIEPVRDYYPVPIATLDFASLY 611
Query: 587 PSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
PS+I A+N C++T L + VE LG+ ++ ++P+ F
Sbjct: 612 PSIIQAHNLCYTTLLNKRTVEKLGLEKD-------------------EDYIVTPNDDMFC 652
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
+R G+L ++L+E+L R K+ +
Sbjct: 653 TAKVRKGLLSQILEELLTARKRAKREL 679
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 598 YPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTVEKLGL 636
>gi|440804295|gb|ELR25172.1| polymerase (DNA directed), delta 1, catalytic subunit [Acanthamoeba
castellanii str. Neff]
Length = 1003
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 31/329 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-------NLNQELSRIT 406
E E+ + + V DPDIL GY I YLL R LGL + + S +
Sbjct: 262 TEAEMLLAWRKFVEIVDPDILTGYNIINFDIWYLLTRAQKLGLVDFPFWGRIKAQRSTMK 321
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ + + + + ++++ GR+ +++ ++ + L+SYT + H L E+
Sbjct: 322 DTTFSSKAFGKRDSKEIKIGGRVQLDVLLVITRDYKLRSYTLNYVSQHFLEEQKEDVHHS 381
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRG 525
++T + + + V Y I+ + RL+++L I EMAR+ G+ +L+RG
Sbjct: 382 IITDLYNGTNDQRRRLAV--YCIKDALLPQRLLDKLMCIINYIEMARVTGVPIAFLLTRG 439
Query: 526 SQFRVESIMLRLSRLNNFVAVSPSI-KQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
Q +V S + R++ + + + + K +++ P++ Y PI LDF S
Sbjct: 440 QQIKVLSQLYRIANTEDLLIPAVKVAKPTGEDGKGYKGAIVIAPKTAYYDVPIATLDFAS 499
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++IA+N C+ST L G +S P ++ SP G FV
Sbjct: 500 LYPSIMIAHNLCYSTLLAP----GEVNSHP----------------PESYERSPGGECFV 539
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ + G+LP++L +L+ R K MK+
Sbjct: 540 REETKPGLLPRILNGLLEARARAKAEMKK 568
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
Y PI LDF SLYPS++IA+N C+ST L
Sbjct: 488 YDVPIATLDFASLYPSIMIAHNLCYSTLLA 517
>gi|367024855|ref|XP_003661712.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
gi|347008980|gb|AEO56467.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
Length = 1081
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 164/332 (49%), Gaps = 42/332 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---- 409
E+++ S + + + Q DPDI+ GY I + YLL+R L + + SR+ V+
Sbjct: 369 KEEDMLSAWRDFLVQVDPDIITGYNIANFDFPYLLDRAKHLKVQGFEYWSRLRGVKSFSK 428
Query: 410 ------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
K+ +RD K T + GR+ ++L +L++ + L+SYT ++ +H L E+
Sbjct: 429 DTSFSSKQMGNRD-TKATNIH--GRLQLDLLQLIQRDHQLRSYTLNSVSFHFLGEQKEDV 485
Query: 464 SWKLLTCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
++T +E R L + + YL + RL+E+L + +EMAR+ G+ F
Sbjct: 486 HHSMITELFEGTPESRRRLALYCLKDAYLPQ-----RLMEKLSCLENYTEMARVTGVPFN 540
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+L+RG Q + S + R + V P+++ + E +I EP Y PI
Sbjct: 541 FLLARGQQVKFLSQLYRKALEQKLVI--PNLRSESSEEQYEGATVI-EPIRNYYDVPIAT 597
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS++ A+N C++T + + +V +LKK ++ ++PS
Sbjct: 598 LDFASLYPSIMQAHNLCYTTLIKKK----------------DVEKWNLKK-DEDYIVTPS 640
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G FV R G+L ++L+E+L R K+ +
Sbjct: 641 GDMFVTTKQRKGLLAQILEELLAARKQAKREL 672
>gi|225555953|gb|EEH04243.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
G186AR]
Length = 1111
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 183/393 (46%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V FI NV D LI + T LLE F
Sbjct: 324 GRKGVFPEANQDPVIQIANVVTRYGESKPFIRNVFVLDTCSLI---VNT----QLLE--F 374
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV--- 408
+ EK L + + + + DPD++IGY I + YLL+R L + SR+ +
Sbjct: 375 DTEEKMLMA-WKNFLVEVDPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFWSRLKHIPSR 433
Query: 409 --EKRNSSRD----EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
+ R SS+ E K+T + GRI ++L +L++ + L+SYT ++ L E+
Sbjct: 434 VGDARFSSKQIGNRESKSTNIS--GRIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKED 491
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
++T + + R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 492 VHHTMITELFNGSPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPF 546
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q + S + R + V P+++ + E +I EP Y PI
Sbjct: 547 NFLLSRGQQVKFISQLFRKALEQQLVI--PNLRNESTSEQYEGATVI-EPIRDFYDVPIA 603
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS+I A+N C++T L + ID + K ++ ++P
Sbjct: 604 TLDFASLYPSIIQAHNLCYTTLLKK------------STIDAHQM-----KEGEDYIVTP 646
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 647 NGDRFCTSKVRKGLLTQILEELLGARKRAKKEL 679
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P +N+ST ++ RD Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 574 PNLRNESTSEQYEGATV-IEPIRD-FYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 628
>gi|115387887|ref|XP_001211449.1| DNA polymerase delta catalytic subunit [Aspergillus terreus
NIH2624]
gi|114195533|gb|EAU37233.1| DNA polymerase delta catalytic subunit [Aspergillus terreus
NIH2624]
Length = 1104
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 161/341 (47%), Gaps = 54/341 (15%)
Query: 350 HFVSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
F EK L + F+E V DPD++IGY I + YLL+R L +R+
Sbjct: 367 EFDKEEKMLMAWRDFLEKV---DPDVIIGYNIANFDFPYLLDRAKHLKCGRFPFWTRLKS 423
Query: 408 V----------EKRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
+ K+ +RD + NT GRI ++L +L++ + +L+SYT ++ Y L
Sbjct: 424 IPSQAKETSFSSKQMGNRDTKATNTN----GRIQLDLLQLVQRDYHLRSYTLNSVSYEFL 479
Query: 457 HERIPLHSWKLLT----CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + R L + + YL + RL+++L + +EMAR
Sbjct: 480 GEQKEDVHHTMITELHNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMAR 534
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LSRG Q + S + R + V + Q+++ ++EP
Sbjct: 535 VTGVPFNFLLSRGQQVKFISQLFRKALEQQLVIPN----QKSNDEQDYEGATVIEPVRGY 590
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKL 630
Y PI LDF SLYPS+I A+N C++T L + VE L +LKK
Sbjct: 591 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVEKL------------------NLKK- 631
Query: 631 QQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++ ++P+G F +R G+L ++L+E+L R K+ +
Sbjct: 632 DEDYIVTPNGHMFCTTKVRKGLLSQILEELLTARKKAKKDL 672
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE L +
Sbjct: 591 YGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVEKLNL 629
>gi|336380987|gb|EGO22139.1| hypothetical protein SERLADRAFT_451027 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1062
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 178/400 (44%), Gaps = 60/400 (15%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE + P IQ+ + + FI N+ + ++G ++ +F
Sbjct: 276 GRKGIFPEPQMDPVIQIANMVTRQGDSQPFIRNIFTLNSCSHIVGSQVLSFK-------- 327
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
+E + + + + + DPD++IGY I + YLL+R L L RI
Sbjct: 328 ---DEGAMLQAWRDFIEEADPDVVIGYNISNFDFPYLLDRAKHLKAAKFPYLGRI----- 379
Query: 411 RNSSRDEVKNTQLQ-------------MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH 457
+S+ +VK+T + GR+ +++ + ++ E L+SYT ++ L
Sbjct: 380 -KNSKTQVKDTHFSSKAYGQRDSKETVLDGRLQLDILQFMQREHKLRSYTLNSVCAQFLG 438
Query: 458 ERIP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARL 513
E+ HS +L E R L + + YL + RL+++L EM+R+
Sbjct: 439 EQKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQ-----RLLDKLMCFVNYIEMSRV 493
Query: 514 FGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLY 573
G+ F +LSRG +V S + R + +V P++ + ++EP+ Y
Sbjct: 494 TGVPFNFLLSRGQSIKVLSQLFRKANEEGYVV--PALLKGEGTDEQYEGATVIEPKKGYY 551
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L + ID ++ + +Q
Sbjct: 552 DSPIATLDFSSLYPSIMMAHNLCYTTLLDKT------------TIDRLQLVKDVDYIQ-- 597
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ F S R G+LP +L++++ R K +K+
Sbjct: 598 ---TPNNDFFATTSRRKGLLPTVLEDLISARKRAKADLKK 634
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 551 YDSPIATLDFSSLYPSIMMAHNLCYTTLLDKT 582
>gi|154344040|ref|XP_001567964.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065298|emb|CAM40726.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1032
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 157/331 (47%), Gaps = 37/331 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL-GLNLNQELSRITEVEKRN 412
E ++ + ++ DPDIL GY I + YLL R L + R +V +R
Sbjct: 301 TEADMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGR--QVHERT 358
Query: 413 SSRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++RD+ + T+L + GRI+++ +++ + L+SY+ ++ + L E+
Sbjct: 359 AARDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDV 418
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + + V Y ++ + ++L+++L I EMAR+ G+ +L
Sbjct: 419 HHSIISDLQQGDEETRRRLAV--YCLKDALLPVKLLDRLMCIVNNVEMARVTGVPVGWLL 476
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
RG Q +V S++LR ++ V P+++ +++P Y P+ LDF
Sbjct: 477 ERGQQIKVFSMLLRKAQKKKLVV--PTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLDF 534
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+IIA+N C+ST + + + +P +D SP+
Sbjct: 535 ASLYPSIIIAHNLCYSTLVRPAD----ARLYPEDALDR----------------SPTSDV 574
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV K + GILP++LQ++L R + MK+
Sbjct: 575 FVKKDVFPGILPEVLQDLLAARKHARAMMKD 605
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ LDF SLYPS+IIA+N C+ST
Sbjct: 524 FYNCPVATLDFASLYPSIIIAHNLCYST 551
>gi|384248668|gb|EIE22151.1| DNA polymerase delta subunit one [Coccomyxa subellipsoidea C-169]
Length = 1116
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 172/414 (41%), Gaps = 62/414 (14%)
Query: 287 VGIILIGQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWG 344
V I G++ PE P IQ+ + E+ + NV D ++G E+ +F
Sbjct: 303 VDIECAGRKGHFPEAEKDPVIQIASLVTEQGQSKPLVRNVMTLDTCAAIVGAEVMSFD-- 360
Query: 345 YLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVL--------GL 396
E++L + + V + DPDI+IGY I YL++R L G
Sbjct: 361 ---------KEEDLLKRWRDLVIETDPDIIIGYNICNFDLPYLIKRAETLKVHDFPYWGR 411
Query: 397 NLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
N L R+ + + + + + ++ + GRI +L L+ + L SY+ + + L
Sbjct: 412 NRKMRL-RMRDAQFSSKAYGTREYKEITIDGRIQFDLLVALQRDHKLSSYSLNAVSAYFL 470
Query: 457 HERIP--LHSW-------------KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQL 501
E+ HS +L + R H + RL+++L
Sbjct: 471 GEQKEDVHHSIISDLQAGNEETRRRLAVYCLKARYHCADMALTHRNMQDAYLPQRLVDKL 530
Query: 502 DFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNF-VAVSPSIKQRAHMRAPE 560
++ EMAR+ G+ +L+RG +V S +LR +R N V P ++
Sbjct: 531 MYMYNYIEMARVTGVPMSFLLTRGQSIKVFSQILRKARQKNLLVPNQPRMQGATGDGVAY 590
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCI 618
+L+ + Y P+ LDF SLYPS+++A+N C+ST L RV+ L D
Sbjct: 591 EGATVLDAKQGFYKTPVATLDFASLYPSIMMAHNLCYSTLLPPDRVKELSPED------- 643
Query: 619 DLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ P+G FV + GILP++L+E+L R K +K
Sbjct: 644 ---------------VLRCPTGHCFVRAARAKGILPEILEELLGARKRAKADLK 682
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 83 PSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--G 140
P+ R +T + ++ Y P+ LDF SLYPS+++A+N C+ST L
Sbjct: 575 PNQPRMQGATGDGVAYEGATVLDAKQGFYKTPVATLDFASLYPSIMMAHNLCYSTLLPPD 634
Query: 141 RVEHLGVSD 149
RV+ L D
Sbjct: 635 RVKELSPED 643
>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1084
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 35/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN----LNQELSRITEVEK 410
E+++ + VR DPDI+ GY ++ Y+L RG L L+ L + LS+ +EK
Sbjct: 348 EEDMLERWAAFVRLADPDIITGYNVDNFDIPYILNRGKSLKLSEFDQLGRLLSKSAFMEK 407
Query: 411 RNSSRDEVKNTQ---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL---HERIPLHS 464
+ S + ++ + GR +L+ ++R L SY+ + L E +P
Sbjct: 408 KTFSSAQYGKSESIKTTIHGRCTFDLYPIMRRSFQLSSYSLNAVSSAFLGQQKEDVPYGI 467
Query: 465 WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
L + H ++ + + + L +++I EMAR+ G+ +L R
Sbjct: 468 ISDLQRGTDDDRHRLAVYCLKDASLPLQLLHNLSLLVNYI----EMARVCGVPIDYLLER 523
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMR-APESLPLILEPESRLYTDPIIVLDFQ 583
G Q +V S++LR + N + + Q A+ A ++EP YT PI LDF
Sbjct: 524 GQQIKVYSMLLRKCKGANLLVPTLQRSQNANSGDAGYEGATVIEPIKAYYTVPIATLDFA 583
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++ A+N C+ST + + + L LQ SPSG F
Sbjct: 584 SLYPSIMQAHNLCYSTLVAPND------------------VDKLNPLQ--YQTSPSGDVF 623
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R GILP +++E+L R K M
Sbjct: 624 VKADTRKGILPMIIEELLSARKQAKYDM 651
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
YT PI LDF SLYPS++ A+N C+ST +
Sbjct: 573 YTVPIATLDFASLYPSIMQAHNLCYSTLVA 602
>gi|401427880|ref|XP_003878423.1| putative DNA polymerase delta catalytic subunit [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494671|emb|CBZ29973.1| putative DNA polymerase delta catalytic subunit [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1032
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 33/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E E+ + ++ DPDIL GY I + YLL R L + +++ T
Sbjct: 301 TEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRAAALKASDAFHYWGRQVHERTVA 360
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ ++ N T+L + GRI+++ +++ + L+SY+ ++ + L E+
Sbjct: 361 RDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHH 420
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + V Y ++ + ++L+++L I EMAR+ G+ +L R
Sbjct: 421 SIISDLQHGDEETRRRLAV--YCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLER 478
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S++LR ++ V P+++ +++P Y P+ LDF S
Sbjct: 479 GQQIKVFSMLLRKAQKKKLVV--PTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLDFAS 536
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N C+ST + + + +P + +L SP+ FV
Sbjct: 537 LYPSIIIAHNLCYSTLVRPAD----ARLYP----------------EDSLDRSPTSDIFV 576
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K + GILP++LQ++L R + MK+
Sbjct: 577 KKEVFPGILPEVLQDLLAARKHARAMMKD 605
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ LDF SLYPS+IIA+N C+ST
Sbjct: 524 FYNCPVATLDFASLYPSIIIAHNLCYST 551
>gi|91773640|ref|YP_566332.1| replicative DNA polymerase I [Methanococcoides burtonii DSM 6242]
gi|91712655|gb|ABE52582.1| DNA polymerase B, delta subunit with exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 910
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 171/353 (48%), Gaps = 47/353 (13%)
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
+L+ E+E G + + +E +L + F E R +DPD++ GY I Y+ +R
Sbjct: 212 VLVMKEVE----GVDEDVEMLPDESDLLNRFFEIFRDYDPDVITGYNINDFDVPYITDRV 267
Query: 392 YVL---GLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTF 448
+L G N+N + R + + S R V T + +PGR+V++ L+R + +L+ YT
Sbjct: 268 KLLNESGSNINSAVGRDS---RALSYRKVVTRTMVPIPGRVVVDSLPLIRQQFSLKRYTL 324
Query: 449 ENIMYHVL-HERIPLHSWKLLTCWWEHRTHLYKWM--TVEHYLIRVTGIIRLIEQLDFIG 505
N+ +L E++ + + + W + + K++ + + + ++ L +I
Sbjct: 325 RNVSKELLGREKLDVDAADMEEHWNDSGEKIRKFIDYSRRDSELALELLLDLKLLDKYIA 384
Query: 506 RTSEMARLFGIQFYEVLSRGSQFRVESIML-RLSRLNNFVAVSPSIKQRAHMRAPESLPL 564
++R+ GI + +S G VE I+L + ++ P ++ + R ++ L
Sbjct: 385 ----LSRVSGILLQDTVSGGQTNMVEHILLTEFGKQGRVMSTKPD-EETSSFRRKQNEDL 439
Query: 565 ----ILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
+LEPE L+ + +IVLD++SLYP++++A+N C++T + P G
Sbjct: 440 KGGAVLEPEKGLHKN-VIVLDYKSLYPTIMMAHNLCYTTVV------------PPGKYPE 486
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ IR SPS FV + GI+P +L+ +LD R+ K+ MK+
Sbjct: 487 DKVIR-----------SPSKGEFVKPEVFKGIVPSVLESLLDKRIETKKLMKQ 528
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 27/131 (20%)
Query: 76 SMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCF 135
S KPD+ S R+ ++ + + P L+ + +IVLD++SLYP++++A+N C+
Sbjct: 421 STKPDEETSSFRRKQNEDLKGGAVLEPEKG----LHKN-VIVLDYKSLYPTIMMAHNLCY 475
Query: 136 STCLGRVEHLGVSDSFPFGCIASRESNQSPPNKDSIHEAEITHPDCSKSSQIDFNPDLFK 195
+T + P G + +SP + E P+ K P + +
Sbjct: 476 TTVV------------PPGKYPEDKVIRSP------SKGEFVKPEVFKG----IVPSVLE 513
Query: 196 SFIRKQLETPK 206
S + K++ET K
Sbjct: 514 SLLDKRIETKK 524
>gi|407045124|gb|EKE43021.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
nuttalli P19]
Length = 1077
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 51/369 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL--------------NLNQ 400
E+EL + + + D DI GY I + YLLER VL + ++ Q
Sbjct: 321 EEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLKSSHVSIRQ 380
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HER 459
+ V R S N + + GRI +++++++H+ L+SYT + + L ++
Sbjct: 381 STFQSKAVGVRES------NELINLEGRIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQK 434
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
+H + T H + + Y ++ T + I+L+E+L + EM R+ GI
Sbjct: 435 EEVHYADITTL---HEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPL 491
Query: 519 YEVLSRGSQFRVESIMLRLSRLNN-FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+L RG Q +V + + R + N F+ K + ++ P Y PI
Sbjct: 492 SYLLPRGQQVKVITQLYRHANAKNLFIPFFQRTKTNGDKYVGAT---VINPIKGFYKVPI 548
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLG---------RVEHLGVSDSFPFGCIDLNVSIRSLK 628
LDF SLYPS++I++N C+ST + +E L S+S D + + +K
Sbjct: 549 STLDFSSLYPSIMISHNLCYSTLIDGIKTRKDVPSIEFLKTSESEE----DRKLYDQIMK 604
Query: 629 KLQ------QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRN 682
KL+ +++ +SP+G FV S R GILP++L+ +L R KQ+ K+ +
Sbjct: 605 KLKDKQLNVEDVELSPNGDLFVKSSKRKGILPEILENLLAAR---KQAKKDMAAATDPFK 661
Query: 683 LTMLNSMLL 691
+T+LN L
Sbjct: 662 ITVLNGRQL 670
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS++I++N C+ST + ++
Sbjct: 543 FYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIK 576
>gi|398021685|ref|XP_003864005.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
gi|322502239|emb|CBZ37322.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
Length = 1032
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 33/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E E+ + ++ DPDIL GY I + YLL R L + +++ T
Sbjct: 301 TEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGRQVHERTVA 360
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ ++ N T+L + GRI+++ +++ + L+SY+ ++ + L E+
Sbjct: 361 RDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHH 420
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + V Y ++ + ++L+++L I EMAR+ G+ +L R
Sbjct: 421 SIISDLQHGDEETRRRLAV--YCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLER 478
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S++LR ++ V P+++ +++P Y P+ LDF S
Sbjct: 479 GQQIKVFSMLLRKAQKKKLVV--PTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLDFAS 536
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N C+ST + + + +P +D SP+ FV
Sbjct: 537 LYPSIIIAHNLCYSTLVRPAD----ARLYPEDALDR----------------SPTSDVFV 576
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K + GILP++LQ++L R + MK+
Sbjct: 577 KKEVFPGILPEVLQDLLAARKHARAMMKD 605
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ LDF SLYPS+IIA+N C+ST
Sbjct: 524 FYNCPVATLDFASLYPSIIIAHNLCYST 551
>gi|157875046|ref|XP_001685930.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
gi|68129003|emb|CAJ06437.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
Length = 1032
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E E+ + ++ DPDIL GY I + YLL R L + +++ T
Sbjct: 301 TEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLSRATALKASDAFHYWGRQVHERTVA 360
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ ++ N T+L + GRI+++ +++ + L+SY+ ++ + L E+
Sbjct: 361 RDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHH 420
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
+++ E R L + + +L ++L+++L I EMAR+ G+ +
Sbjct: 421 SIISDLQHGDEETRRRLAVYCLKDAFLP-----VKLLDRLMCIVNNVEMARVTGVPVGWL 475
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L RG Q +V S++LR ++ V P+++ +++P Y P+ LD
Sbjct: 476 LERGQQIKVFSMLLRKAQKKKLVV--PTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLD 533
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+IIA+N C+ST + + + +P +D SP+
Sbjct: 534 FASLYPSIIIAHNLCYSTLVRPAD----ARLYPEDALDR----------------SPTSD 573
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV K + GILP++LQ++L R + MK+
Sbjct: 574 VFVKKEVFPGILPEVLQDLLAARKHARAMMKD 605
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ LDF SLYPS+IIA+N C+ST
Sbjct: 524 FYNCPVATLDFASLYPSIIIAHNLCYST 551
>gi|146097987|ref|XP_001468284.1| putative DNA polymerase delta catalytic subunit [Leishmania
infantum JPCM5]
gi|134072651|emb|CAM71367.1| putative DNA polymerase delta catalytic subunit [Leishmania
infantum JPCM5]
Length = 1032
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 33/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-----LNQELSRITEV 408
E E+ + ++ DPDIL GY I + YLL R L + +++ T
Sbjct: 301 TEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRATALKASDAFHYWGRQVHERTVA 360
Query: 409 EKRNSSRDEVKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ ++ N T+L + GRI+++ +++ + L+SY+ ++ + L E+
Sbjct: 361 RDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHH 420
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + V Y ++ + ++L+++L I EMAR+ G+ +L R
Sbjct: 421 SIISDLQHGDEETRRRLAV--YCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLER 478
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S++LR ++ V P+++ +++P Y P+ LDF S
Sbjct: 479 GQQIKVFSMLLRKAQKKKLVV--PTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLDFAS 536
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+IIA+N C+ST + + + +P +D SP+ FV
Sbjct: 537 LYPSIIIAHNLCYSTLVRPAD----ARLYPEDALDR----------------SPTSDVFV 576
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
K + GILP++LQ++L R + MK+
Sbjct: 577 KKEVFPGILPEVLQDLLAARKHARAMMKD 605
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ LDF SLYPS+IIA+N C+ST
Sbjct: 524 FYNCPVATLDFASLYPSIIIAHNLCYST 551
>gi|67478112|ref|XP_654477.1| DNA polymerase delta catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56471523|gb|EAL49087.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1077
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 51/369 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL--------------NLNQ 400
E+EL + + + D DI GY I + YLLER VL + ++ Q
Sbjct: 321 EEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLKSSHVSIRQ 380
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HER 459
+ V R S N + + GRI +++++++H+ L+SYT + + L ++
Sbjct: 381 STFQSKAVGVRES------NELINLEGRIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQK 434
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
+H + T H + + Y ++ T + I+L+E+L + EM R+ GI
Sbjct: 435 EEVHYADITTL---HEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPL 491
Query: 519 YEVLSRGSQFRVESIMLRLSRLNN-FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+L RG Q +V + + R + N F+ K + ++ P Y PI
Sbjct: 492 SYLLPRGQQVKVITQLYRHANAKNLFIPFFQRTKTNGDKYVGAT---VINPIKGFYKVPI 548
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLG---------RVEHLGVSDSFPFGCIDLNVSIRSLK 628
LDF SLYPS++I++N C+ST + +E L S+S D + + +K
Sbjct: 549 STLDFSSLYPSIMISHNLCYSTLIDGIKTRKDIPSIEFLKTSESEE----DRKLYDQIMK 604
Query: 629 KLQ------QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRN 682
KL+ +++ +SP+G FV S R GILP++L+ +L R KQ+ K+ +
Sbjct: 605 KLKDKQLNVEDVELSPNGDLFVKSSKRKGILPEILENLLAAR---KQAKKDMAAATDPFK 661
Query: 683 LTMLNSMLL 691
+T+LN L
Sbjct: 662 ITVLNGRQL 670
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS++I++N C+ST + ++
Sbjct: 543 FYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIK 576
>gi|449709355|gb|EMD48635.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1077
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 51/369 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL--------------NLNQ 400
E+EL + + + D DI GY I + YLLER VL + ++ Q
Sbjct: 321 EEELLKGWSDFINAIDVDIFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLKSSHVSIRQ 380
Query: 401 ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HER 459
+ V R S N + + GRI +++++++H+ L+SYT + + L ++
Sbjct: 381 STFQSKAVGVRES------NELINLEGRIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQK 434
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQF 518
+H + T H + + Y ++ T + I+L+E+L + EM R+ GI
Sbjct: 435 EEVHYADITTL---HEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPL 491
Query: 519 YEVLSRGSQFRVESIMLRLSRLNN-FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+L RG Q +V + + R + N F+ K + ++ P Y PI
Sbjct: 492 SYLLPRGQQVKVITQLYRHANAKNLFIPFFQRTKTNGDKYVGAT---VINPIKGFYKVPI 548
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLG---------RVEHLGVSDSFPFGCIDLNVSIRSLK 628
LDF SLYPS++I++N C+ST + +E L S+S D + + +K
Sbjct: 549 STLDFSSLYPSIMISHNLCYSTLIDGIKTRKDIPSIEFLKTSESEE----DRKLYDQIMK 604
Query: 629 KLQ------QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRN 682
KL+ +++ +SP+G FV S R GILP++L+ +L R KQ+ K+ +
Sbjct: 605 KLKDKQLNVEDVELSPNGDLFVKSSKRKGILPEILENLLAAR---KQAKKDMAAATDPFK 661
Query: 683 LTMLNSMLL 691
+T+LN L
Sbjct: 662 ITVLNGRQL 670
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS++I++N C+ST + ++
Sbjct: 543 FYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIK 576
>gi|145514650|ref|XP_001443230.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410608|emb|CAK75833.1| unnamed protein product [Paramecium tetraurelia]
Length = 980
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 48/330 (14%)
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV 418
F +F + + DPDI+IGY I+ Y+L R L L + RI + + +
Sbjct: 229 FQVFFQGL---DPDIIIGYNIQNFDIPYILNRAQNLKLKNYGKFGRIP------TDQSTI 279
Query: 419 KNTQ-------------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
KN + + + GRI +++ + E L S++ N+ + L ++ +
Sbjct: 280 KNGKFLSKAMGMRETKDINIEGRIQLDMMIHMMKEHKLSSFSLNNVSFQFLKQQKEDVHY 339
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ K + V Y ++ + I L+++L + +EMAR+ G+ + R
Sbjct: 340 SIIYTLQNKNPETRKRIAV--YCLKDAELPILLMDKLCCLYNYAEMARVTGVPVNYLFMR 397
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S +LR ++ +F+ + K +L+P Y PI LDF S
Sbjct: 398 GQQIKVASQLLRKAKHYDFIIPTEHFKSTDQEYQG---AFVLDPVKNFYKVPIATLDFAS 454
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP-SGVAF 643
LYPS+++A+N C+ST L + F G D + +T+SP + F
Sbjct: 455 LYPSIMMAHNMCYSTLLN-------TSPFKVGLAD------------EQVTVSPETNAIF 495
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V ++R G+LP +L+++++ R K + +
Sbjct: 496 VKPNVRKGMLPLILEDLINARKKAKNQLAQ 525
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R K D PT KST + Y PI LDF SLYPS+++A
Sbjct: 405 SQLLRKAKHYDFIIPTEHFKSTDQEYQGAFVLDPVKN--FYKVPIATLDFASLYPSIMMA 462
Query: 131 YNYCFSTCLG 140
+N C+ST L
Sbjct: 463 HNMCYSTLLN 472
>gi|302308438|ref|NP_985361.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|299790630|gb|AAS53185.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|374108589|gb|AEY97495.1| FAFL189Wp [Ashbya gossypii FDAG1]
Length = 1092
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 42/318 (13%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGL----------NLNQELSRITEVEKRNSSRDEVK 419
DPD++IGY YL+ R L + N Q + K + +R+
Sbjct: 389 DPDVIIGYNTTNFDLPYLINRAAALNVSSFPYFGRLVNSKQVIKETVFSSKAHGTRE--- 445
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHR 475
+ + + GR+ +++++ +R E L+SYT ++ H L E+ ++ E R
Sbjct: 446 SKSINIEGRLQLDIFQFVRREYQLRSYTLNSVSAHFLGEQKEDVHHSIIASLHRGDSETR 505
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
L + + YL +RL+E+L + +EMAR+ G+ F +++RG Q +V S +
Sbjct: 506 RRLAVYCLKDAYLP-----LRLLEKLMALVNYTEMARVTGVPFPYLITRGQQIKVISQLY 560
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R + + P++ H ++EP Y PI LDF SLYPS+++A+N
Sbjct: 561 R--KCLQIDTIIPNMHGN-HSDDQYQGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNL 617
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPK 655
C++T C V LK+ ++ I+P+G FV R GILP
Sbjct: 618 CYTTL----------------CNKATVQRLQLKE-NEDYIITPNGDYFVTSKKRRGILPI 660
Query: 656 MLQEILDTRLMVKQSMKE 673
+L+E++ R K +K+
Sbjct: 661 ILEELIAARQRAKGELKK 678
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF SLYPS+++A+N C++T
Sbjct: 595 YDIPIATLDFNSLYPSIMMAHNLCYTT 621
>gi|325090528|gb|EGC43838.1| DNA polymerase subunit delta large [Ajellomyces capsulatus H88]
Length = 1111
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 40/315 (12%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV-----EKRNSSRD----EVKN 420
DPD++IGY I + YLL+R L + SR+ + + R SS+ E K+
Sbjct: 392 DPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFWSRLKHIPSRVGDARFSSKQIGNRESKS 451
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRT 476
T + GRI ++L +L++ + L+SYT ++ L E+ ++T + + R
Sbjct: 452 TNIS--GRIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPDSRR 509
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
L + + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R
Sbjct: 510 RLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFR 564
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
+ V P+++ + E +I EP Y PI LDF SLYPS+I A+N C
Sbjct: 565 KALEQQLVI--PNLRNESTSEQYEGATVI-EPIRDFYDVPIATLDFASLYPSIIQAHNLC 621
Query: 597 FSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
++T L + ID + K ++ ++P+G F +R G+L ++
Sbjct: 622 YTTLLKK------------STIDAHQM-----KEGEDYIVTPNGDRFCTSKVRKGLLTQI 664
Query: 657 LQEILDTRLMVKQSM 671
L+E+L R K+ +
Sbjct: 665 LEELLGARKRAKKEL 679
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P +N+ST ++ RD Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 574 PNLRNESTSEQYEGATV-IEPIRD-FYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 628
>gi|398408323|ref|XP_003855627.1| DNA polymerase delta catalytic subunit [Zymoseptoria tritici
IPO323]
gi|339475511|gb|EGP90603.1| hypothetical protein MYCGRDRAFT_35747 [Zymoseptoria tritici IPO323]
Length = 1107
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 183/399 (45%), Gaps = 63/399 (15%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F F
Sbjct: 320 GRKGVFPEANIDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLI-VNTQVF--------EF 370
Query: 352 VSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
S EK L + F+E V DPD++IGY + YLL+R L + +R+ V+
Sbjct: 371 HSEEKMLMAWRDFLEEV---DPDVIIGYNTSNFDFPYLLDRAAHLKVGKFPYWTRLKNVK 427
Query: 410 ----------KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
K+ +RD + NT GR+ ++L +L++ + L+SYT ++ H L E
Sbjct: 428 SAARDANFSSKQMGNRDTKATNTN----GRLQLDLLQLIQRDYQLRSYTLNSVSAHFLKE 483
Query: 459 RIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ ++T + E R L + + YL + RL+++L + +EMAR+
Sbjct: 484 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVT 538
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ F +LSRG Q + S + R + V P++K E +I EP Y
Sbjct: 539 GVPFNMLLSRGQQVKFISQLFRKALEQQLVV--PNLKPEGSDEQYEGATVI-EPTRGYYD 595
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
P+ LDF SLYPS++ A+N C++T L + VE L +LKK +
Sbjct: 596 VPVATLDFASLYPSIMQAHNLCYTTLLNKNAVEKL------------------NLKK-DE 636
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ ++P+G F +R G+L ++L+E+L R K+++
Sbjct: 637 DYIVTPNGDLFCTTKVRKGLLSQILEELLGARKRAKKAL 675
>gi|449301894|gb|EMC97903.1| hypothetical protein BAUCODRAFT_31911 [Baudoinia compniacensis UAMH
10762]
Length = 1107
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 179/393 (45%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F +G
Sbjct: 320 GRKGVFPEANIDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLI-VNTQIFEFG------- 371
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLG---------LNLNQEL 402
+E+++ + + V++ DPD++IGY I + YLL+R L L + +
Sbjct: 372 --SEEKMLMAWRDFVQEVDPDVIIGYNICNFDFPYLLDRAAHLKVAPFPFWSRLKNVKSV 429
Query: 403 SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
+R T + + K T GR+ ++L +L++ + L+SYT ++ H L+E+
Sbjct: 430 ARDTNFSSKQMGNRDTKATNTN--GRLQLDLLQLVQRDYQLRSYTLNSVCAHFLNEQKED 487
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
++T + E R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 488 VHHTMITELYNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPF 542
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LS+G Q + S + R + V PS+K E +I EP Y P+
Sbjct: 543 NFLLSKGQQIKFLSQLYRKALEQQLVI--PSLKSEGSDEQYEGATVI-EPTRGYYDVPVA 599
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
LDF SLYPS++ A+N C++T L + + SLKK ++ +P
Sbjct: 600 TLDFASLYPSIMQAHNLCYTTLLNKTA----------------IEKLSLKK-DEDYIQTP 642
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G F +R G+L ++L+E+L R K+ +
Sbjct: 643 NGDLFCTAKVRKGLLSQILEELLSARKRAKKEL 675
>gi|401407254|ref|XP_003883076.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325117492|emb|CBZ53044.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 1219
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 36/334 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR-- 411
+EKE+ + + E VRQ DPD L GY YL+ R L ++ LS++ +E +
Sbjct: 490 DEKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRATTLKVDGFNRLSKLKSLESKIR 549
Query: 412 ---NSSRDEVKNTQLQMP--GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
SSR + ++P GRI ++ L+R + L+SY+ + + L E+ +
Sbjct: 550 DSSFSSRALGTHEGKEIPTEGRIQFDILELVRRDYKLKSYSLNFVSFEFLKEQKEDVHYS 609
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++ + R + + + YL + L+ +++ EM+R+ G +L
Sbjct: 610 MIGDLFRGCPSSRRRIGVYCLKDAYLPLRL-LKELLFLYNYV----EMSRVTGTPLNFLL 664
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE-SLPLILEPESRLYTDPIIVLD 581
+RG Q +V + +LR + N++ P +K+ + + +LEP+ Y PI LD
Sbjct: 665 TRGQQIKVTAQLLRKCKELNYLV--PVVKRTGGDNSVQYEGATVLEPKKGFYDKPIATLD 722
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS++IA+N C+ST + E +++ D+ V+ T+ P
Sbjct: 723 FASLYPSIMIAHNICYSTLVAASEAHKMTNP-----DDVTVTT----------TLPPH-- 765
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV +R G+LP +++E++ R ++ M K
Sbjct: 766 KFVKAHVRRGVLPMIVEELIAARKAARKEMAAAK 799
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS++IA+N C+ST + E
Sbjct: 713 FYDKPIATLDFASLYPSIMIAHNICYSTLVAASE 746
>gi|340959854|gb|EGS21035.1| DNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1108
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK---- 410
E+++ + + + + DPD++ GY I + YLL+R L + +E SR+ V+
Sbjct: 373 EEQMLAAWQNFLVRVDPDVITGYNIANFDFPYLLDRAEHLNVPKFREWSRLKGVKSVARD 432
Query: 411 RNSSRDEVKNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + + GR+ ++L +L++ + +L+SYT ++ H L E+ +
Sbjct: 433 TNFSSKQMGNRDTKATNISGRLQLDLLQLIQRDHHLRSYTLNSVCQHFLGEQKEDVHHSM 492
Query: 468 LTCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T +E R L + + YL + RL+++L + +EMAR+ G+ F +L+
Sbjct: 493 ITELFEGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLA 547
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P+++ + E +I EP Y PI LDF
Sbjct: 548 RGQQVKFLSQLFRKALEQKLVI--PNLRSESSEEQYEGATVI-EPVRGYYDVPIATLDFA 604
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+I+A+N C++T + + +V +LKK ++ ++P+G F
Sbjct: 605 SLYPSIIMAHNLCYTTLIKKK----------------DVEKWNLKK-DEDYIVTPNGDMF 647
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
V R G+L ++L+E+L R KQ+ KE
Sbjct: 648 VTTKQRKGLLAQILEELLAAR---KQAKKE 674
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS+I+A+N C++T + +
Sbjct: 594 YDVPIATLDFASLYPSIIMAHNLCYTTLIKK 624
>gi|240278554|gb|EER42060.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
H143]
Length = 1053
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 40/315 (12%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV-----EKRNSSRD----EVKN 420
DPD++IGY I + YLL+R L + SR+ + + R SS+ E K+
Sbjct: 392 DPDVIIGYNIANFDFPYLLKRAEHLKCSGFHFWSRLKHIPSRVGDARFSSKQIGNRESKS 451
Query: 421 TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRT 476
T + GRI ++L +L++ + L+SYT ++ L E+ ++T + + R
Sbjct: 452 TNIS--GRIQLDLLQLVQRDYQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPDSRR 509
Query: 477 HLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLR 536
L + + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R
Sbjct: 510 RLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFR 564
Query: 537 LSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYC 596
+ V P+++ + E +I EP Y PI LDF SLYPS+I A+N C
Sbjct: 565 KALEQQLVI--PNLRNESTSEQYEGATVI-EPIRDFYDVPIATLDFASLYPSIIQAHNLC 621
Query: 597 FSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKM 656
++T L + ID + K ++ ++P+G F +R G+L ++
Sbjct: 622 YTTLLKK------------STIDAH-----QMKEGEDYIVTPNGDRFCTSKVRKGLLTQI 664
Query: 657 LQEILDTRLMVKQSM 671
L+E+L R K+ +
Sbjct: 665 LEELLGARKRAKKEL 679
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
P +N+ST ++ RD Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 574 PNLRNESTSEQYEGATV-IEPIRD-FYDVPIATLDFASLYPSIIQAHNLCYTTLLKK 628
>gi|452986964|gb|EME86720.1| hypothetical protein MYCFIDRAFT_202624 [Pseudocercospora fijiensis
CIRAD86]
Length = 1089
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 182/397 (45%), Gaps = 59/397 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F F
Sbjct: 302 GRKGVFPEANVDPVIQIANVVTRYGEEKPFVRNVFCMDTCSLI-VNTQLF--------EF 352
Query: 352 VSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
EK L + FIE V DPD++IGY I + YLL+R L + LSR+ V+
Sbjct: 353 DQEEKMLMAWRDFIEEV---DPDVIIGYNIANFDFPYLLDRAAHLKVARFPFLSRLRNVK 409
Query: 410 ----------KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE 458
K+ +RD + NT GR+ ++L +L++ + L+SYT ++ H L+E
Sbjct: 410 SVAKDTNFASKQMGNRDAKATNTN----GRLQLDLLQLIQRDYQLRSYTLNSVSAHFLNE 465
Query: 459 RIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
+ ++T + E R L + + YL + RL+++L + +EMAR+
Sbjct: 466 QKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVT 520
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYT 574
G+ F +L++G Q + S + R + V P++K + E +I EP Y
Sbjct: 521 GVPFNFLLAKGQQIKFISQLFRKALEQQLVV--PNLKTDSSDEQYEGATVI-EPTRGYYD 577
Query: 575 DPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNL 634
P+ LDF SLYPS++ A+N C++T L + + LKK ++
Sbjct: 578 VPVATLDFASLYPSIMQAHNLCYTTLLNKTA----------------IEKLDLKK-DEDY 620
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++P+G F +R G+L ++L+E+L R K+ +
Sbjct: 621 IVTPNGDLFCTTKVRKGLLSQILEELLGARKRAKKEL 657
>gi|440635761|gb|ELR05680.1| DNA polymerase delta subunit 1 [Geomyces destructans 20631-21]
Length = 1102
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 176/395 (44%), Gaps = 55/395 (13%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ V F+ NV D LI + F F
Sbjct: 315 GRKGVFPEANHDPVIQIANVVTRYGEKKPFVRNVFCLDTTSLI-VNTQIF--------EF 365
Query: 352 VSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLERGYVL---GLNLNQELSRIT 406
EK L + F+E V DPDI+IGY I + YLL+R L G + L I
Sbjct: 366 QREEKMLMAWRDFLEMV---DPDIIIGYNISNFDFPYLLDRAKHLKIGGFDYWSRLHSIK 422
Query: 407 EVEKR-NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL 462
V K N S ++ N + GR+ ++L +L++ + L+SYT ++ L E+
Sbjct: 423 SVAKESNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVSAQFLGEQKED 482
Query: 463 HSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
++T + E R L + + YL + RL+E+L + +EMAR+ G+ F
Sbjct: 483 VHHTMITELFNGTPESRRRLAVYCLKDAYLPQ-----RLLEKLSCLENYTEMARVTGVPF 537
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+LSRG Q + S + R + V P+ + A E +I EP Y PI
Sbjct: 538 NFLLSRGQQVKFVSQLFRKALEQKLVI--PNQRTEASGEQYEGATVI-EPTRGYYDVPIA 594
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
LDF SLYPS+I A+N C++T L + V+ LG+ K ++ +
Sbjct: 595 TLDFASLYPSIIQAHNLCYTTLLNKASVDKLGL-------------------KKDEDYIV 635
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+P+G F R G+L ++L E+L R K+ +
Sbjct: 636 TPNGDMFCTAKQRKGLLTQILDELLTARKQAKREL 670
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + V+ LG+
Sbjct: 589 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKASVDKLGL 627
>gi|221487122|gb|EEE25368.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 1268
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 154/334 (46%), Gaps = 36/334 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--R 411
+EKE+ + + E VRQ DPD L GY YL+ R L + LS++ +E R
Sbjct: 539 DEKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRAATLKVVGFNRLSKLKSLESKIR 598
Query: 412 NSSRDEV-----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+SS + + GRI +L L+R + L+SY+ + + L E+ +
Sbjct: 599 DSSFSSRALGTHEGKDIATEGRIQFDLLELVRRDYKLKSYSLNFVSFEFLKEQKEDVHYN 658
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++ + R + + + YL + L+ +++ EM+R+ G +L
Sbjct: 659 MIGDLFRGCPSSRRRIGVYCLKDAYLPLRL-LKELLFLYNYV----EMSRVTGTPLNFLL 713
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE-SLPLILEPESRLYTDPIIVLD 581
+RG Q +V + +LR + N+V P +K+ + + +LEP Y PI LD
Sbjct: 714 TRGQQIKVTAQLLRKCKELNYVV--PVVKRTGGDNSVQYEGATVLEPRKGFYDKPIATLD 771
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS++IA+N C+ST + +++ D+ V+ T SP
Sbjct: 772 FASLYPSIMIAHNICYSTLVASSAAHTMNNP-----DDVTVT-----------TTSPPH- 814
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV K IR G+LP +++E++ R ++ M K
Sbjct: 815 KFVKKHIRRGVLPMIVEELIAARKAARKEMAAAK 848
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
R Y PI LDF SLYPS++IA+N C+ST
Sbjct: 759 RKGFYDKPIATLDFASLYPSIMIAHNICYST 789
>gi|167380902|ref|XP_001735501.1| DNA polymerase delta catalytic subunit [Entamoeba dispar SAW760]
gi|165902501|gb|EDR28305.1| DNA polymerase delta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1077
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 171/363 (47%), Gaps = 39/363 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN--LNQELSRITEVEKRN 412
E+EL + + + D D+ GY I + YLLER VL + + + + V R
Sbjct: 321 EEELLKGWSDFINAIDVDVFTGYNIMNFDFKYLLERAKVLKVKDFSSFSKLKSSHVSVRQ 380
Query: 413 SSRDEVK------NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHSW 465
S+ N + + GRI +++++++H+ L+SYT + + L ++ +H
Sbjct: 381 STFQSKAVGVRESNELINLEGRIPFDMFQVIQHDYKLRSYTLNFVSSNFLGDQKEEVHYA 440
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+ T H + + Y ++ T + I+L+E+L + EM R+ GI +L R
Sbjct: 441 DITTL---HEGSMDDRNRIAVYCLKDTYLPIKLLEKLMSLVNGFEMCRVTGIPLSYLLPR 497
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL-PLILEPESRLYTDPIIVLDFQ 583
G Q +V + +L R N + QR + + ++ P Y PI LDF
Sbjct: 498 GQQVKV---ITQLYRHANAKKLFIPFFQRTKTNGDKYVGATVISPIKGFYKVPISTLDFS 554
Query: 584 SLYPSVIIAYNYCFSTCLG---------RVEHLGVSDSFPFGCIDLNVSIRSLKKLQ--- 631
SLYPS++I++N C+ST + +E L S+S D + + +KKL+
Sbjct: 555 SLYPSIMISHNLCYSTLIDGIKTRKDVPSIEFLKTSESEE----DRKMYDQIMKKLKEKQ 610
Query: 632 ---QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNS 688
+++ +SP+G FV S R GILP++L+ +L R KQ+ K+ + +T+LN
Sbjct: 611 LNVEDVELSPNGDLFVKSSKRKGILPEILENLLAAR---KQAKKDMAAATDPFKITVLNG 667
Query: 689 MLL 691
L
Sbjct: 668 RQL 670
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS++I++N C+ST + ++
Sbjct: 543 FYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIK 576
>gi|237831459|ref|XP_002365027.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211962691|gb|EEA97886.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|221506807|gb|EEE32424.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 1268
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 154/334 (46%), Gaps = 36/334 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK--R 411
+EKE+ + + E VRQ DPD L GY YL+ R L + LS++ +E R
Sbjct: 539 DEKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRAATLKVVGFNRLSKLKSLESKIR 598
Query: 412 NSSRDEV-----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+SS + + GRI +L L+R + L+SY+ + + L E+ +
Sbjct: 599 DSSFSSRALGTHEGKDIATEGRIQFDLLELVRRDYKLKSYSLNFVSFEFLKEQKEDVHYN 658
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++ + R + + + YL + L+ +++ EM+R+ G +L
Sbjct: 659 MIGDLFRGCPSSRRRIGVYCLKDAYLPLRL-LKELLFLYNYV----EMSRVTGTPLNFLL 713
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE-SLPLILEPESRLYTDPIIVLD 581
+RG Q +V + +LR + N+V P +K+ + + +LEP Y PI LD
Sbjct: 714 TRGQQIKVTAQLLRKCKELNYVV--PVVKRTGGDNSVQYEGATVLEPRKGFYDKPIATLD 771
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS++IA+N C+ST + +++ D+ V+ T SP
Sbjct: 772 FASLYPSIMIAHNICYSTLVASSAAHTMNNP-----DDVTVT-----------TTSPPH- 814
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV K IR G+LP +++E++ R ++ M K
Sbjct: 815 KFVKKHIRRGVLPMIVEELIAARKAARKEMAAAK 848
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
R Y PI LDF SLYPS++IA+N C+ST
Sbjct: 759 RKGFYDKPIATLDFASLYPSIMIAHNICYST 789
>gi|403353908|gb|EJY76499.1| DNA polymerase [Oxytricha trifallax]
Length = 1068
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 165/340 (48%), Gaps = 42/340 (12%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
++ ++E L + + + + + DPDI+ G+ I + Y++ R LG+ +I + +
Sbjct: 315 NWFNSETALLASWRDFILEVDPDIITGFNIVNFDFPYIINRAIQLGMKNYPTFGKIIDSQ 374
Query: 410 KR------NSSRDEVKNT-QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIP 461
R +S ++T ++ M GR+ ++ +L E L+SYT ++ L E +
Sbjct: 375 TRIKNGTFSSKALGTRDTKEIIMEGRVQFDMLQLFLREYKLRSYTLNSVSSEFLGEQKED 434
Query: 462 LHSWKLLTCWWEH---RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+H ++ + R L + + YL +RL+E+L + +EM+R+ G+
Sbjct: 435 VHHSQIFILQEKDQFTRRRLAIYCLKDAYLP-----LRLMEKLLSLYNFTEMSRVTGVPI 489
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+ +RG Q +V S + R + N + P+ + ++ E L+++P + +PI
Sbjct: 490 SYLFTRGQQIKVTSQLYRKANACNLLI--PTERGPSNEGKFEG-ALVIDPNRDFFLEPIA 546
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
+LDF SLYPS+++A+N C+ST + P + LK +P
Sbjct: 547 ILDFASLYPSIMLAHNICYSTLI------------PPKAVKFYNPDHYLK--------TP 586
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSE 678
+G F+ ++ GILP +L+E+++ R K++ KE+ S+
Sbjct: 587 TGDHFIKAEVKKGILPLILEELIEAR---KKAKKEFALSD 623
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
PT + S F+ + +RD + +PI +LDF SLYPS+++A+N C+ST +
Sbjct: 517 PTERGPSNEGKFEGALV-IDPNRD-FFLEPIAILDFASLYPSIMLAHNICYSTLI 569
>gi|402085670|gb|EJT80568.1| DNA polymerase delta catalytic subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1104
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 162/334 (48%), Gaps = 44/334 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
S E+++ + + + + DPDI+ GY I + YLL R L + + +R+ V R+
Sbjct: 367 SQEEKMLRAWRDFLVEVDPDIITGYNICNFDFPYLLNRAKYLKVKDFDQWTRLPSV--RS 424
Query: 413 SSRD-----------EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+++D + K+T GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 425 TAKDSNFSSKQMGNRDTKSTNTN--GRLQLDLLQLIQRDHQLRSYTLNSVCSHFLGEQKE 482
Query: 462 LHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ ++T + E R L + + YL + RL+++L + +EMAR+ G+
Sbjct: 483 DVHYTMITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVP 537
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
F +LS+G Q + S M R + V P+++ E +I EP Y PI
Sbjct: 538 FNFLLSKGQQIKFVSQMFRKALEQKLVV--PNLRVEGSDDQYEGATVI-EPTRGYYDAPI 594
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
LDF SLYPS++ A+N C++T + + D+F + ++ T++
Sbjct: 595 ATLDFASLYPSIMQAHNLCYTTLISQ----KAIDAFKL-------------EKDEDYTVT 637
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G FV R G+L ++L+E+L R K+ +
Sbjct: 638 PTGDMFVTVKRRKGLLAQILEELLSARKQAKREL 671
>gi|403360889|gb|EJY80140.1| DNA polymerase delta catalytic subunit [Oxytricha trifallax]
Length = 870
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 165/340 (48%), Gaps = 42/340 (12%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
++ ++E L + + + + + DPDI+ G+ I + Y++ R LG+ +I + +
Sbjct: 315 NWFNSETALLASWRDFILEVDPDIITGFNIVNFDFPYIINRAIQLGMKNYPTFGKIIDSQ 374
Query: 410 KR------NSSRDEVKNT-QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIP 461
R +S ++T ++ M GR+ ++ +L E L+SYT ++ L E +
Sbjct: 375 TRIKNGTFSSKALGTRDTKEIIMEGRVQFDMLQLFLREYKLRSYTLNSVSSEFLGEQKED 434
Query: 462 LHSWKLLTCWWEH---RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
+H ++ + R L + + YL +RL+E+L + +EM+R+ G+
Sbjct: 435 VHHSQIFILQEKDQFTRRRLAIYCLKDAYLP-----LRLMEKLLSLYNFTEMSRVTGVPI 489
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+ +RG Q +V S + R + N + P+ + ++ E L+++P + +PI
Sbjct: 490 SYLFTRGQQIKVTSQLYRKANACNLLI--PTERGPSNEGKFEG-ALVIDPNRDFFLEPIA 546
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
+LDF SLYPS+++A+N C+ST + P + LK +P
Sbjct: 547 ILDFASLYPSIMLAHNICYSTLI------------PPKAVKFYNPDHYLK--------TP 586
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSE 678
+G F+ ++ GILP +L+E+++ R K++ KE+ S+
Sbjct: 587 TGDHFIKAEVKKGILPLILEELIEAR---KKAKKEFALSD 623
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 85 PTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
PT + S F+ + +RD + +PI +LDF SLYPS+++A+N C+ST +
Sbjct: 517 PTERGPSNEGKFEGALV-IDPNRD-FFLEPIAILDFASLYPSIMLAHNICYSTLI 569
>gi|156041052|ref|XP_001587512.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980]
gi|154695888|gb|EDN95626.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1106
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 181/393 (46%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ + F+ NV D LI + T + + E
Sbjct: 319 GRKGVFPEANQDPVIQIANIVTRYGEKKPFVRNVFCLDTTSLI---VNTQIFEFDKEEKM 375
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
+S ++ F+E V DPDI+IGY I + YLL+R L + + +R+ ++ +
Sbjct: 376 LSKWRD----FLEEV---DPDIIIGYNIANFDFPYLLDRADHLKIKNFSQWTRLKSIQSQ 428
Query: 412 ----NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
N S ++ N + GR+ ++L +L++ + L+SYT ++ L E+
Sbjct: 429 AKTSNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVH 488
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + E R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 489 HTMITELFNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNF 543
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q + S + R + V P++ + E +I EP Y+ PI L
Sbjct: 544 LLSRGQQVKFISQLFRKALEQKLVI--PNLSTASSEEQYEGATVI-EPTRGYYSVPIATL 600
Query: 581 DFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+I A+N C++T L + VE L + ++ ++P
Sbjct: 601 DFASLYPSIIQAHNLCYTTLLKKDVVEALNLEKD-------------------EDYIVTP 641
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G FV R G+L ++L+E+L R K+ +
Sbjct: 642 NGDMFVTTKQRKGLLTQILEELLTARKQAKREL 674
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y+ PI LDF SLYPS+I A+N C++T L +
Sbjct: 593 YSVPIATLDFASLYPSIIQAHNLCYTTLLKK 623
>gi|67900676|ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|40742186|gb|EAA61376.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|259483322|tpe|CBF78614.1| TPA: catalytic subunit of DNA polymerase delta (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1044
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 159/332 (47%), Gaps = 43/332 (12%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG---------YVLGLNLNQELSRI 405
E+++ + + +++ DPD++IGY I + YLL+R Y LN + ++
Sbjct: 369 EEKMLMAWRDFIQKVDPDVIIGYNIANFDFPYLLDRAKHLKCTNFPYWTRLNGMRSEAKD 428
Query: 406 TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
T + + K T GR+ ++L +L++ + NL+SYT ++ Y L E+
Sbjct: 429 TNFSSKQMGNRDTKATNTN--GRLQLDLLQLVQRDHNLRSYTLNSVSYEFLGEQKEDVHH 486
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++T + + R L + + YL + RL+++L + +EMAR+ G+ F +
Sbjct: 487 TMITELYNGTPDSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFL 541
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
LSRG Q + S + R + V P++K + ++EP Y PI LD
Sbjct: 542 LSRGQQVKFLSQLYRKALQQQLVI--PNMKSTDEQDYEGAT--VIEPIRDYYDVPIATLD 597
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+I A+N C++T L + S+ +KK ++ ++P+G
Sbjct: 598 FASLYPSIIQAHNLCYTTLLNK------------------NSVAGMKK-DEDYIVTPNGD 638
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F +R G+L ++L+E+L R K+ + +
Sbjct: 639 MFCTPKVRKGLLSQILEELLSARKKAKKELAQ 670
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + G+
Sbjct: 589 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVAGM 625
>gi|391325933|ref|XP_003737481.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1088
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 159/365 (43%), Gaps = 47/365 (12%)
Query: 321 FIENVRQWDPDILI-GYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEI 379
FI N+ D I G E+ +F E ++ + +R DPDI+ GY I
Sbjct: 334 FIRNIMTLDTCAPIPGVEVMSFD-----------TESKMLDQWAAFIRLVDPDIITGYNI 382
Query: 380 ETLSWGYLLERGYVLGLNLNQELSRI---------TEVEKRNSSRDEVKNTQLQMPGRIV 430
+ YL+ R L + L RI + ++ + R E KN + M GR+
Sbjct: 383 LNFDYTYLVNRAKHLKVKNFPYLGRIRGSESVIKESMIQSKQMGRRENKN--VTMEGRVN 440
Query: 431 INLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIR 490
+L L + L+SYT + Y+ L E+ ++T + + V + L
Sbjct: 441 FDLLLALLRDYKLRSYTLNAVSYNFLQEQKEDVQHSIITDLQNGDEQTRRRLAV-YCLKD 499
Query: 491 VTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSI 550
+RL+E+L I EMAR+ G+ +L RG Q +V S +LR +R + + ++
Sbjct: 500 ALLPLRLLEKLMCIINYMEMARVTGVPLSYLLLRGQQIKVVSQLLRKAREQDLILPVINV 559
Query: 551 KQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVS 610
+ ++EP Y+ PI LDF SLYPS+++A+N C++T L
Sbjct: 560 QTGDDFTGA----TVIEPTRGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLN-------- 607
Query: 611 DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQS 670
+ +R K Q + +PSG FV S R G+LP +L+ +L R K
Sbjct: 608 ----------DQKMREQLKPDQYIK-TPSGDYFVKASCRKGLLPDILESLLSARKKAKTD 656
Query: 671 MKEYK 675
+K K
Sbjct: 657 LKNEK 661
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+ PI LDF SLYPS+++A+N C++T L
Sbjct: 578 YSVPIATLDFSSLYPSIMMAHNLCYTTLL 606
>gi|70943300|ref|XP_741713.1| DNA polymerase delta catalytic subunit [Plasmodium chabaudi
chabaudi]
gi|56520266|emb|CAH84358.1| DNA polymerase delta catalytic subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 694
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 35/296 (11%)
Query: 388 LERGYVLGLNLNQELSRITEV----EKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHE 440
L RG L L + + RI V + N S + + ++ + GRI +++ L++ +
Sbjct: 1 LNRGTALNLKKLKYIGRIKNVPSIVKDANFSSKQFGTHETKEININGRIQFDVYDLIKRD 60
Query: 441 VNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGII--RLI 498
L+SYT + + L E+ + ++ + K + Y I+ G++ RLI
Sbjct: 61 YRLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQNENSESRKRIAT--YCIK-DGLLPLRLI 117
Query: 499 EQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRA 558
++L FI EMAR+ G F +L+RG Q +V S + R + N++ PS + +
Sbjct: 118 DKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNYII--PSTYMKVNSND 175
Query: 559 PESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCI 618
+LEP Y +PI LDF SLYPS++IA+N C+ST + + +
Sbjct: 176 KFEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKNNDEIS---------- 225
Query: 619 DLNVSIRSLKKLQQNLTISP--SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
DLN + ++T P + FV +++ G+LP +++E++ R VK MK
Sbjct: 226 DLN---------KNDITTVPGKNNFKFVKGNVKRGVLPLIVEELIKARKNVKAMMK 272
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS++IA+N C+ST +
Sbjct: 190 YIEPISTLDFASLYPSIMIAHNLCYSTLI 218
>gi|346974556|gb|EGY18008.1| DNA polymerase delta catalytic subunit [Verticillium dahliae
VdLs.17]
Length = 1104
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 43/323 (13%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS----SRDE 417
F+++V DPD++IGY I + YLL+R L + + SRI + R S +
Sbjct: 379 FLQSV---DPDLIIGYNIANFDFPYLLDRAKHLKVAGFEYWSRIPSMPSRAKETSFSSKQ 435
Query: 418 VKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
+ N GR+ ++L +L++ + +L+SYT ++ L E+ ++T +
Sbjct: 436 IGNRDSKSTNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNG 495
Query: 473 --EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
E R L + + YL + RL+++L + +EMAR+ G F +L+RG Q R
Sbjct: 496 TPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGAPFNMLLARGQQVRF 550
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S + R + V P++K A E +I EP Y PI LDF SLYPS++
Sbjct: 551 ISQLFRKALEQKLVI--PNMKSEASDEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIM 607
Query: 591 IAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
A+N C++T + + +E LG+ K ++ ++P+G FV
Sbjct: 608 QAHNLCYTTIVDKKAIEKLGL-------------------KKDEDYIVTPAGNTFVTAKQ 648
Query: 649 RCGILPKMLQEILDTRLMVKQSM 671
R G+L ++L+E+L R K+ +
Sbjct: 649 RKGLLAQILEELLAARKQAKREL 671
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS++ A+N C++T + + +E LG+
Sbjct: 590 YDVPIATLDFASLYPSIMQAHNLCYTTIVDKKAIEKLGL 628
>gi|336368221|gb|EGN96564.1| hypothetical protein SERLA73DRAFT_58496 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1084
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 176/401 (43%), Gaps = 57/401 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE + P IQ+ + + FI N+ + ++G ++ +F
Sbjct: 293 GRKGIFPEPQMDPVIQIANMVTRQGDSQPFIRNIFTLNSCSHIVGSQVLSFK-------- 344
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----- 405
+E + + + + + DPD++IGY I + YLL+R L L RI
Sbjct: 345 ---DEGAMLQAWRDFIEEADPDVVIGYNISNFDFPYLLDRAKHLKAAKFPYLGRIKSMFS 401
Query: 406 ---------TEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
T + + + K T L GR+ +++ + ++ E L+SYT ++ L
Sbjct: 402 QLLALFVKDTHFSSKAYGQRDSKETVLD--GRLQLDILQFMQREHKLRSYTLNSVCAQFL 459
Query: 457 HERIP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ HS +L E R L + + YL + RL+++L EM+R
Sbjct: 460 GEQKEDVHHSVITELQNGTPESRRRLAVYCLKDAYLPQ-----RLLDKLMCFVNYIEMSR 514
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LSRG +V S + R + +V P++ + ++EP+
Sbjct: 515 VTGVPFNFLLSRGQSIKVLSQLFRKANEEGYVV--PALLKGEGTDEQYEGATVIEPKKGY 572
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y PI LDF SLYPS+++A+N C++T L + ID ++ + +Q
Sbjct: 573 YDSPIATLDFSSLYPSIMMAHNLCYTTLLDKT------------TIDRLQLVKDVDYIQ- 619
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+P+ F S R G+LP +L++++ R K +K+
Sbjct: 620 ----TPNNDFFATTSRRKGLLPTVLEDLISARKRAKADLKK 656
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T L +
Sbjct: 573 YDSPIATLDFSSLYPSIMMAHNLCYTTLLDKT 604
>gi|302421082|ref|XP_003008371.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261351517|gb|EEY13945.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1055
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 43/323 (13%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS----SRDE 417
F+++V DPD++IGY I + YLL+R L + + SRI + R S +
Sbjct: 330 FLQSV---DPDLIIGYNIANFDFPYLLDRAKHLKVAGFEYWSRIPSMPSRAKETSFSSKQ 386
Query: 418 VKN---TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW-- 472
+ N GR+ ++L +L++ + +L+SYT ++ L E+ ++T +
Sbjct: 387 IGNRDSKSTNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTMITELFNG 446
Query: 473 --EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
E R L + + YL + RL+++L + +EMAR+ G F +L+RG Q R
Sbjct: 447 TPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGAPFNMLLARGQQVRF 501
Query: 531 ESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
S + R + V P++K A E +I EP Y PI LDF SLYPS++
Sbjct: 502 ISQLFRKALEQKLVI--PNMKSEASDEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIM 558
Query: 591 IAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSI 648
A+N C++T + + +E LG+ K ++ ++P+G FV
Sbjct: 559 QAHNLCYTTIVDKKAIEKLGL-------------------KKDEDYIVTPAGNTFVTAKQ 599
Query: 649 RCGILPKMLQEILDTRLMVKQSM 671
R G+L ++L+E+L R K+ +
Sbjct: 600 RKGLLAQILEELLAARKQAKREL 622
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS++ A+N C++T + + +E LG+
Sbjct: 541 YDVPIATLDFASLYPSIMQAHNLCYTTIVDKKAIEKLGL 579
>gi|399219112|emb|CCF75999.1| unnamed protein product [Babesia microti strain RI]
Length = 977
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 40/342 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---- 409
NE ++ + + R DPD++ GY I YL+ER L L+ L RI +
Sbjct: 252 NETDMLLAWSQFFRAVDPDLITGYNIVNFDIPYLIERAMSLNLDEFCYLGRIKNIPTTVK 311
Query: 410 ---KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPLHSW 465
K N +N + + GRI+ ++ L+R E +L+SY+ + + L E + +H
Sbjct: 312 SGVKSNRQLGLYENKDINIEGRIIFDVHDLIRREYSLKSYSLNYVSFEFLKELKDDVHYS 371
Query: 466 KLLTCWW---EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+ + + E R L + ++ L+ + I +L+ ++++ EMAR+ G ++
Sbjct: 372 IMKSLHYGTNEERRRLANY-CLKDSLLPLKLIDKLLLLINYV----EMARVTGTPIKFLI 426
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG Q +V +LR ++ N V P IK E +++EP + PI VLD+
Sbjct: 427 TRGQQIKVTMQILRQCKVMNLVM--PCIKSNGQEANYEG-AMVMEPIKGYHKVPIAVLDY 483
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
QSLYPS++IA+N C+ST + R E L D F + N G+
Sbjct: 484 QSLYPSLMIAHNICYSTLI-RSEDLHKYDEKDFTRVPDN-----------------EGIC 525
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK--EYKFSESLRN 682
F+ I+ G+LP ++ +L R K MK E F++++ N
Sbjct: 526 FIKPHIK-GLLPIVVDNLLTARAKAKHEMKMCEDPFTKNVLN 566
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 114 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRES 161
PI VLD+QSLYPS++IA+N C+ST + R E L D F + E
Sbjct: 477 PIAVLDYQSLYPSLMIAHNICYSTLI-RSEDLHKYDEKDFTRVPDNEG 523
>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
Length = 913
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 159/332 (47%), Gaps = 34/332 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSS 414
E+++ + F + +++DPD+++GY + Y+ +R L + R+ + +
Sbjct: 236 EEDMLTRFFDIFQEYDPDVVVGYNMNDFDIPYIKDRADYLNNKGASIVPRVGRDGRLMTY 295
Query: 415 RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHSWKLLTCWWE 473
R T + M GRIV++ L+R + +L+ YT N+ +L E++ + +++ W +
Sbjct: 296 RRLGTRTMVSMTGRIVMDTLPLIRQQFSLKRYTLRNVSKELLGREKLDVEPHQMVEYWND 355
Query: 474 HRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVES 532
K++ Y R + + + L+ +L + + ++++ G +V+ G VE+
Sbjct: 356 GGEKTKKFI---DYARRDSELALELVTKLQLLDKYIALSQVSGSVLQDVVDGGQSSMVEN 412
Query: 533 IMLR-LSRLNNFVAVSPSIKQRAHMRAPE-SLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
++ R + + P + + + E +LEP+ L D +++LD++SLYP+++
Sbjct: 413 LLFREFGKQGRVIPPKPDNRPDDNEQGEEIKGGEVLEPKKGLL-DNVVILDYKSLYPTIM 471
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS-PSGVAFVDKSIR 649
+A+N C++T V + P G TI+ PSG FV+ +
Sbjct: 472 MAHNLCYTTV--------VVNDHPNGE-----------------TINPPSGGEFVNPDVL 506
Query: 650 CGILPKMLQEILDTRLMVKQSMKEYKFSESLR 681
GI+P +L+ +L+ R VK+ MK ++ R
Sbjct: 507 KGIVPSILETLLNQRSEVKKKMKSISDGDTYR 538
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 78 KPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
KPD+RP + + + + P D +++LD++SLYP++++A+N C++T
Sbjct: 428 KPDNRPDDNEQGEEIKGG--EVLEPKKG-----LLDNVVILDYKSLYPTIMMAHNLCYTT 480
Query: 138 CL 139
+
Sbjct: 481 VV 482
>gi|380488089|emb|CCF37614.1| DNA polymerase delta catalytic subunit [Colletotrichum
higginsianum]
Length = 1103
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 162/332 (48%), Gaps = 44/332 (13%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR--- 411
E+++ S + + + + DPDILIGY I + YLL+R L ++ + SRI + R
Sbjct: 368 EEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLLDRAKHLKVSGFEYWSRIPSMPSRAKE 427
Query: 412 -NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GR+ ++L +L++ + +L+SYT ++ L E+ +
Sbjct: 428 TNFSSKQMGNRDSKATNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQKEDVHHTM 487
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E R L + + YL + RL+++L + +EMAR+ GI F +LS
Sbjct: 488 ITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGIPFNFLLS 542
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P+++ E +I EP Y P+ LDF
Sbjct: 543 RGQQVKFISQLFRKALEQKLVI--PNMRSEGSDEQYEGATVI-EPTRGYYDVPVATLDFA 599
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ----QNLTISPS 639
SLYPS++ A+N C++T + + ++++K Q ++ ++P+
Sbjct: 600 SLYPSIMQAHNLCYTTLVNK---------------------KAIEKFQLKKDEDYIVTPN 638
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G FV R G+L ++L+E+L R K+ +
Sbjct: 639 GDTFVTNKQRKGLLAQILEELLSARKQAKREL 670
>gi|429962842|gb|ELA42386.1| hypothetical protein VICG_00485 [Vittaforma corneae ATCC 50505]
Length = 419
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 41/333 (12%)
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV- 408
++ E+EL + + E + +PDI+IGY I++ + Y+L+R +L L L R +V
Sbjct: 69 YWFETEEELLNAWREYFLETNPDIVIGYNIKSFDFSYILDRAEILRLKDFGRLGRTDKVS 128
Query: 409 ---EKRNSSR--DEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL---HERI 460
++ SS+ + + GR++ +L ++R + L+SY+ ++ H L E +
Sbjct: 129 RVVNRQQSSKMFGTFDAKDINIEGRLIFDLLHVIRRDHKLRSYSLNSVSVHFLGDQKEDV 188
Query: 461 PLHS-WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
P S + L E R + + + YL +++ ++L+ + SE++R +
Sbjct: 189 PPSSMFDLQNGNKETRARIASYCLHDTYLP-----MQIFDKLNVLINYSELSRATYVPID 243
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
+RG+ +V + + R S + ++ P + + P +++P Y+DPI V
Sbjct: 244 FFSTRGTSIKVLTQIYRESSKHGYLI--PDV-EVTDEYVPYEGGFVMDPIRGFYSDPITV 300
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS++I+ N C++T L + ++ V G I +P+
Sbjct: 301 LDFTSLYPSIMISKNLCYTTLLTKEQYDKV------GGIK-----------------TPT 337
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
F S + GILP++L+ +L R K K
Sbjct: 338 NNYFCSASTKEGILPQVLRNLLKARKEAKALFK 370
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
Y+DPI VLDF SLYPS++I+ N C++T L + ++
Sbjct: 293 FYSDPITVLDFTSLYPSIMISKNLCYTTLLTKEQY 327
>gi|429852563|gb|ELA27695.1| DNA polymerase delta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1102
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 164/328 (50%), Gaps = 36/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEK 410
E+++ S + + + + DPDI+IGY I + YLL+R L +N + SRI ++ ++
Sbjct: 369 EEKMLSEWQKFLVKVDPDIIIGYNIANFDFPYLLDRARHLKVNGFEYWSRIPSIASKAKE 428
Query: 411 RNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GR+ ++L +L++ + +L+SYT ++ + L E+ +
Sbjct: 429 TNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSNFLGEQKEDVHHTM 488
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E R L + + YL + RL+++L + +EMAR+ GI F +LS
Sbjct: 489 ITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGIPFNFLLS 543
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P+++ + E +I EP Y PI LDF
Sbjct: 544 RGQQVKFISQLFRKALEQKLVI--PNLRSESSDEQYEGATVI-EPTRGYYDVPIATLDFA 600
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++ A+N C++T + + + SL K ++ ++P+G F
Sbjct: 601 SLYPSIMQAHNLCYTTLVNKKA----------------IEKFSLVK-DEDYIVTPNGDTF 643
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R G+L ++L+E+L R K+ +
Sbjct: 644 VTVKKRKGLLAQILEELLAARKQAKREL 671
>gi|367037701|ref|XP_003649231.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
gi|346996492|gb|AEO62895.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
Length = 1103
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 45/324 (13%)
Query: 362 FIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR--ITEVEKRNS-SRDEV 418
F+E V DPDI+ GY I + YLL+R L + + SR + V K S S ++
Sbjct: 379 FLEKV---DPDIITGYNIANFDFPYLLDRAAHLKVRGFEYWSRTHVKSVAKDTSFSSKQM 435
Query: 419 KNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE-- 473
N + GR+ ++L +L++ + L+SYT ++ H L E+ ++T +E
Sbjct: 436 GNRDTKATNTNGRLQLDLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHHSMITELFEGT 495
Query: 474 --HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
R L + + YL + RL+++L + +EMAR+ G+ F +L+RG Q +
Sbjct: 496 PESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFL 550
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S + R + V P+++ + E +I EP Y PI LDF SLYPS+I
Sbjct: 551 SQLFRKALEQKLVI--PNLRSESSEEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIIQ 607
Query: 592 AYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIR 649
A+N C++T + + +E G+ K ++ ++P+G FV R
Sbjct: 608 AHNLCYTTLIKKKDIEKWGL-------------------KKDEDYIVTPNGDMFVTTKQR 648
Query: 650 CGILPKMLQEILDTRLMVKQSMKE 673
G+L ++L+E+L R KQ+ KE
Sbjct: 649 KGLLSQILEELLAAR---KQAKKE 669
>gi|342874671|gb|EGU76649.1| hypothetical protein FOXB_12838 [Fusarium oxysporum Fo5176]
Length = 1054
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 164/328 (50%), Gaps = 36/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEK 410
E+++ S + + + + DPDI+ GY I + YLL+R L ++ + +RI ++ ++
Sbjct: 319 EEKMLSDWQKFLIRADPDIITGYNISNFDFPYLLDRAKHLKVSGFEYWTRIPSMQSKAKE 378
Query: 411 RNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GR+ ++L +L++ + +L+SYT ++ + L E+ +
Sbjct: 379 TNFSSKQMGNRDTKATNTNGRLQLDLLQLIQRDHHLRSYTLNSVSANFLGEQKEDVHHTM 438
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 439 ITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLS 493
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P++K A E +I EP Y PI LDF
Sbjct: 494 RGQQVKFISQLFRKALEQKLVI--PNLKSEASDEQYEGATVI-EPTRGYYDVPIATLDFA 550
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++ A+N C++T + + + +LKK ++ ++P+G F
Sbjct: 551 SLYPSIMQAHNLCYTTLVSKKA----------------IEAFNLKK-DEDYIVTPNGDTF 593
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R G+L ++L+E+L R K+ +
Sbjct: 594 VTIKQRKGLLAQILEELLAARKQAKREL 621
>gi|171693865|ref|XP_001911857.1| hypothetical protein [Podospora anserina S mat+]
gi|170946881|emb|CAP73685.1| unnamed protein product [Podospora anserina S mat+]
Length = 1108
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 162/328 (49%), Gaps = 35/328 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR--ITEVEKR 411
+E ++ + + + + + DPDI+IGY I + YLL+R L ++ + SR + V K
Sbjct: 373 DEGKMLAAWRDFLEKVDPDIIIGYNIANFDFPYLLDRAKHLKVHNFEYWSRTHVKSVAKE 432
Query: 412 -NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GR+ ++L +L++ + L+SYT ++ H L E+ +
Sbjct: 433 TNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAHFLGEQKEDVHHSM 492
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E R L + + YL + RL+++L + +EMAR+ G+ F +L+
Sbjct: 493 ITELFEGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLA 547
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P+++ + E +I EP Y PI LDF
Sbjct: 548 RGQQVKFLSQLFRKALEQKLVI--PNMRSESSEEQYEGATVI-EPTRGYYDVPIATLDFA 604
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+I A+N C++T + + ++ SL K ++ ++P+G F
Sbjct: 605 SLYPSIIQAHNLCYTTLIKKK----------------DIERWSLVK-DEDYIVTPNGDMF 647
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R G+L ++L+E+L R K+ +
Sbjct: 648 VTTKKRKGLLAQILEELLSARKEAKREL 675
>gi|154305265|ref|XP_001553035.1| hypothetical protein BC1G_08927 [Botryotinia fuckeliana B05.10]
Length = 846
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 181/393 (46%), Gaps = 51/393 (12%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
G++ PE P IQ+ + F+ NV D LI + T + Y E
Sbjct: 319 GRKGVFPEANQDPVIQIANIVTRYGEKKPFVRNVFCLDTTSLI---VNTQIFVYKEEETM 375
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TE 407
+S ++ F+E V DPDI+IGY I + YLL+R L + + +R+ ++
Sbjct: 376 LSKWRD----FLEEV---DPDIIIGYNIANFDFPYLLDRADHLKIKNFSQWTRLKSIHSQ 428
Query: 408 VEKRNSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ N S ++ N + GR+ ++L +L++ + L+SYT ++ L E+
Sbjct: 429 AKTSNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQKEDVH 488
Query: 465 WKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
++T + E R L + + +L + RL+++L + +EMAR+ G+ F
Sbjct: 489 HTMITELFNGTPESRRRLAVYCLKDAFLPQ-----RLMDKLSCLENYTEMARVTGVPFNF 543
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+LSRG Q + S + R + V P++ + E +I EP Y+ PI L
Sbjct: 544 LLSRGQQVKFISQLFRKALEQKLVI--PNLSSNSSEEQYEGATVI-EPTRGYYSVPIATL 600
Query: 581 DFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP 638
DF SLYPS+I A+N C++T L + VE L + ++ ++P
Sbjct: 601 DFASLYPSIIQAHNLCYTTLLKKDVVEALKLEKD-------------------EDYIVTP 641
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+G FV R G+L ++L+E+L R K+ +
Sbjct: 642 NGDMFVTTKQRKGLLTQILEELLTARKQAKREL 674
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y+ PI LDF SLYPS+I A+N C++T L +
Sbjct: 593 YSVPIATLDFASLYPSIIQAHNLCYTTLLKK 623
>gi|310792587|gb|EFQ28114.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1103
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 46/346 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR-- 411
E+++ S + + + + DPDILIGY I + YLL+R L + + SRI + R
Sbjct: 367 KEEKMLSEWQKFLIKVDPDILIGYNIANFDFPYLLDRAKHLKVPGFEYWSRIPSMPSRAK 426
Query: 412 --NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
N S ++ N + GR+ ++L +L++ + +L+SYT ++ L E+
Sbjct: 427 ETNFSSKQMGNRDSKATNTNGRLQLDLLQLVQRDYHLRSYTLNSVCSQFLGEQKEDVHHT 486
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T + E R L + + YL + RL+++L + +EMAR+ GI F +L
Sbjct: 487 MITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGIPFNFLL 541
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q + S + R + V P+++ E +I EP Y PI LDF
Sbjct: 542 SRGQQVKFISQLFRKALEQKLVI--PNMRSEGTDEQYEGATVI-EPTRGYYDVPIATLDF 598
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ----QNLTISP 638
SLYPS++ A+N C++T + + ++++K Q + ++P
Sbjct: 599 ASLYPSIMQAHNLCYTTLVNK---------------------KAIEKFQLKKDDDYIVTP 637
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQ--SMKEYKFSESLRN 682
+G FV R G+L ++L+E+L R K+ +M+ F +++ N
Sbjct: 638 NGDTFVTTKQRKGLLAQILEELLTARKQAKRELAMETDPFKKAVLN 683
>gi|453087535|gb|EMF15576.1| DNA polymerase delta catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1107
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 49/339 (14%)
Query: 350 HFVSNEKELFS--IFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE 407
F EK L + F+E V DPD++IGY I + YLL+R L SR+
Sbjct: 369 EFDQEEKMLMAWRDFLEEV---DPDVIIGYNIANFDFPYLLDRAAHLKCGHFPFWSRLKN 425
Query: 408 V----------EKRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
V K+ +RD + NT GR+ ++L +L++ + L+SYT ++ H L
Sbjct: 426 VRSVAKETNFASKQMGNRDSKATNTN----GRLQLDLLQLIQRDYQLRSYTLNSVSAHFL 481
Query: 457 HERIPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
E+ ++T + E R L + + YL + RL+++L + +EMAR
Sbjct: 482 KEQKEDVHHTMITELYNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMAR 536
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRL 572
+ G+ F +LS+G Q + S + R + V P +K E +I EP
Sbjct: 537 VTGVPFNFLLSKGQQVKFISQLFRKALEQQLVV--PDLKSEGSDEQYEGATVI-EPTRGY 593
Query: 573 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQ 632
Y PI LDF SLYPS++ A+N C++T L + ++ +LKK +
Sbjct: 594 YDVPIATLDFASLYPSIMQAHNLCYTTLLNKNA----------------IAKLNLKK-DE 636
Query: 633 NLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ ++P+G F +R G+L ++L+E+L R K+ +
Sbjct: 637 DYIVTPNGDLFCTTKVRKGLLSQILEELLGARKRAKKEL 675
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y PI LDF SLYPS++ A+N C++T L +
Sbjct: 594 YDVPIATLDFASLYPSIMQAHNLCYTTLLNK 624
>gi|440293443|gb|ELP86560.1| DNA polymerase delta catalytic subunit, putative [Entamoeba
invadens IP1]
Length = 1078
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 167/347 (48%), Gaps = 36/347 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---KR 411
E+EL + + V D DI GY I + YL+ R L + SR+ + K+
Sbjct: 320 EEELLKGWSDFVNDIDVDIFTGYNIMNFDFNYLITRANTLKVKDFGRFSRLRKSNVTMKQ 379
Query: 412 NSSRDEVKNTQ-----LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHS- 464
+ + + T+ + + GRI +++++++ + L+SYT + + L ++ +H
Sbjct: 380 GTFQSKAVGTRESFELIGLEGRIPFDMFQVIQRDYKLRSYTLNFVSSNFLGDQKEDVHYS 439
Query: 465 --WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L + R + + + YL IRLI++L + EM R+ GI +L
Sbjct: 440 DIADLHNGSPDDRNRIAVYCLKDTYLP-----IRLIKKLMSLVNGVEMCRVTGIPLSYLL 494
Query: 523 SRGSQFRVESIMLRLSRLNNFVA---VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
RG Q +V + + R + +F+ PS + ++ A ++ P Y DPI V
Sbjct: 495 PRGQQVKVITQLYRHANDKHFLIPFYQRPSGEGDKYVGAT-----VINPIKGFYRDPISV 549
Query: 580 LDFQSLYPSVIIAYNYCFSTCL----GRVEHLGVSDSFPFG-CIDLNVSIRSLKK-LQQN 633
LDF SLYPS++I++N C+ST + RV+ + D G D N + +KK L+++
Sbjct: 550 LDFSSLYPSIMISHNLCYSTLIEGVKTRVDVKNIEDLKTSGEQSDKNAYDQIVKKCLEKH 609
Query: 634 LT-----ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
L+ +SP+G FV + + GILP++L+ +L R K+ M K
Sbjct: 610 LSLDDVELSPNGDLFVRSNKQKGILPEILENLLAARKQAKKDMAAEK 656
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y DPI VLDF SLYPS++I++N C+ST + V+
Sbjct: 542 FYRDPISVLDFSSLYPSIMISHNLCYSTLIEGVK 575
>gi|290985690|ref|XP_002675558.1| predicted protein [Naegleria gruberi]
gi|284089155|gb|EFC42814.1| predicted protein [Naegleria gruberi]
Length = 1019
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 188/429 (43%), Gaps = 75/429 (17%)
Query: 293 GQESELPEVRTKPIQM--NFVSNEKELFSTFIENVR-QWDPDILIGYEIETFSWGYLLER 349
G++ P+ + P+ + N+V+ + + I+N+ D ++G EI F
Sbjct: 223 GKDGHFPQAESDPVIVISNYVTVQGK-SEPLIKNILCLGDCAPIVGVEIHCFK------- 274
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
EKE+ + V DPDI+ GY + YL+ R L L RI
Sbjct: 275 ----TEKEMLETWRNFVIGIDPDIITGYNVINFDLPYLINRAKALKSGSFPFLGRIA--- 327
Query: 410 KRNSSRDEVKNT-------------QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL 456
R ++KN+ + + GRI +++ + ++ + L SYT ++ H L
Sbjct: 328 ---GKRSQMKNSTFSSKAYGTRESKDINIEGRIQLDVMQAIQRDHKLSSYTLNSVSAHFL 384
Query: 457 HERIPLHSWKLLTCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMAR 512
++ +++ E R L + + +L IRL+E+L I EMAR
Sbjct: 385 GDQKEEVHHSIISTLHEGSDEDRRRLASYCLKDAFLP-----IRLLEKLLIIINYIEMAR 439
Query: 513 LFGIQFYEVLSRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLP------L 564
+ GI +L RG Q +V S +LR ++ ++ +S S K+ + E+
Sbjct: 440 VTGIPVSFILKRGQQIKVISQLLRKAKKEEYLMPTISKSGKKESLDEEGETSEETYEGGF 499
Query: 565 ILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSI 624
+L P++ Y PI LDF SLYPS++IA+N C++T L +
Sbjct: 500 VLSPKTGYYDIPITTLDFASLYPSIMIAHNLCYTTLLKK--------------------- 538
Query: 625 RSLKKLQQNLTI-SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNL 683
L KL ++ + +PSG F+ + ++ G+LP +L+E+L R K+ M K ++ L
Sbjct: 539 EDLAKLSEDQYVKTPSGDYFIKREVQQGLLPLVLEELLQARKQAKKDMD--KATDPLEKA 596
Query: 684 TMLNSMLLI 692
M L +
Sbjct: 597 VMNGRQLAL 605
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSS---------SSRDRLYTDPIIVLDFQ 121
S L R K ++ PT + S D + S S + Y PI LDF
Sbjct: 459 SQLLRKAKKEEYLMPTISKSGKKESLDEEGETSEETYEGGFVLSPKTGYYDIPITTLDFA 518
Query: 122 SLYPSVIIAYNYCFSTCLGR 141
SLYPS++IA+N C++T L +
Sbjct: 519 SLYPSIMIAHNLCYTTLLKK 538
>gi|219121567|ref|XP_002181135.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407121|gb|EEC47058.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1087
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 152/337 (45%), Gaps = 51/337 (15%)
Query: 370 DPDILIGYEIETLSWGYLLER----------------GYVLGLNLNQELSRITEVEKRNS 413
DPDI+ GY ++ YLL+R G+ + +++ + ++S
Sbjct: 353 DPDIITGYNVQNFDIPYLLDRADSLSKGSSHRKAVLSGFAQWGRVRNTKAKMRDTMFQSS 412
Query: 414 SRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHSW---KLLT 469
+ + N + + GR++ ++ ++ L SY+ ++ L ++ +H L
Sbjct: 413 AYGKRANVETTIDGRVIFDMLPYMQRNHKLSSYSLNSVCAEYLGQQKEDVHHSIISDLQN 472
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
E R L + + L + RL+++L + EMAR+ G+ ++SRG Q +
Sbjct: 473 GSDEDRHRLAVYCLKDALLPQ-----RLMDKLSVLVNYIEMARVTGVPMSFLISRGQQIK 527
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDFQSLYP 587
V S++LR R + P++++ + A +L+P Y PI LDF SLYP
Sbjct: 528 VFSMILRKCRHEKLLV--PTLRKSGNANADVGYEGATVLDPIKNYYEVPIATLDFASLYP 585
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
S++ AYN C+ST + + G +D ++ + S +G FV S
Sbjct: 586 SIMQAYNLCYSTLVNPAD---------VGKLDPDIYRK-----------SENGNVFVHSS 625
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEY--KFSESLRN 682
++ GILP +L+E+L R K+ MK F +++N
Sbjct: 626 VKKGILPTILEELLSARKRAKKDMKNAPTDFDRAVQN 662
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS++ AYN C+ST +
Sbjct: 571 YEVPIATLDFASLYPSIMQAYNLCYSTLV 599
>gi|406862660|gb|EKD15710.1| DNA polymerase family B [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1103
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 52/338 (15%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
S+E+++ + + + + + DPDI+IGY I + YLL+R L + + +R+ N
Sbjct: 367 SSEEKMLTKWRDFMEEVDPDIIIGYNICNFDFPYLLDRAKHLKVKDFDKWTRL------N 420
Query: 413 SSRDEVKNTQL---QMP----------GRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
S+R K T QM GR+ ++L +L++ + L+SYT ++ L E+
Sbjct: 421 SARSAAKETNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAQFLGEQ 480
Query: 460 IPLHSWKLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + E R L + + YL + RL+++L + +EM+R+ G
Sbjct: 481 KEDVHHTMITELFNGTPESRRRLAVYCLKDAYLPQ-----RLMDKLSCLENYTEMSRVTG 535
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q + S + R + V P+++ A E +I EP Y
Sbjct: 536 VPFNYLLSRGQQVKFVSQLFRKALEQKLVI--PNLRTDASDEQYEGATVI-EPTRGYYDV 592
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+I A+N C++T L + VE LG+ ++
Sbjct: 593 PIATLDFASLYPSIIQAHNLCYTTLLNKASVEKLGLVKD-------------------ED 633
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++P+ F R G+L ++L+E+L R K+ +
Sbjct: 634 YIVTPNNDMFCTTKQRKGLLTQILEELLTARKQAKREL 671
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGV 147
Y PI LDF SLYPS+I A+N C++T L + VE LG+
Sbjct: 590 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKASVEKLGL 628
>gi|346327129|gb|EGX96725.1| DNA polymerase delta catalytic subunit [Cordyceps militaris CM01]
Length = 1108
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 158/328 (48%), Gaps = 35/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR--- 411
E ++ S + + + + DPDI+IGY I + YL+ R L +N + +R+ + R
Sbjct: 370 EAKMLSEWQQFLIKVDPDIIIGYNIANFDFPYLINRAKHLKVNGFEYWTRLPSIPSRVKD 429
Query: 412 -NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
+ S ++ N + GR+ ++L +L++ + L+SYT ++ L E+ +
Sbjct: 430 TSFSSKQIGNRDTKATNTNGRLQLDLLQLIQRDHQLRSYTLNSVCAQFLGEQKEDVHHTM 489
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E+R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 490 ITELFNGTPENRRRLAIYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLS 544
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P++K E +I EP Y PI LDF
Sbjct: 545 RGQQIKFVSQLFRKALEQKLVI--PNMKGDPSDDQYEGATVI-EPTRGYYDVPIATLDFA 601
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++ A+N C++T + R + + F + ++ ++P+G F
Sbjct: 602 SLYPSIMQAHNLCYTTLITRKDRIA-----QFNLVK-----------DEDYIVTPNGDTF 645
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R G+L ++L+E+L R K+ +
Sbjct: 646 VTTKQRKGLLAQILEELLSARKQAKREL 673
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 146
Y PI LDF SLYPS++ A+N C++T + R + +
Sbjct: 591 YDVPIATLDFASLYPSIMQAHNLCYTTLITRKDRIA 626
>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
Length = 1139
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQELSRIT 406
E EL + VR+ DPDI+ GY I +L+ R LG L S+++
Sbjct: 404 TEIELLESWSAFVRECDPDIVTGYNITNFDLPFLMNRAKHLGARKFPYLGRLRNVQSKLS 463
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
E + + + ++ M GR+ +++ ++L+ + L+SYT ++ H L E+
Sbjct: 464 ETKFSSKAYGTRESKVTSMEGRVPLDVLQILQRDYKLRSYTLNSVSAHFLSEQKEDVHHS 523
Query: 467 LLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
++T E R L + + YL +RL+ +L + EMAR+ G+ +L
Sbjct: 524 IITDLQNGNDETRRRLAVYCMKDAYLP-----LRLLSKLMCVVNYMEMARVTGVPLSYLL 578
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
SRG Q +V S ++R + ++ V + +R +++P+ Y PI LDF
Sbjct: 579 SRGQQIKVISQLMRHAGQHDLVI---PVHERQGSDEQYEGATVIQPKRGYYDTPIATLDF 635
Query: 583 QSLYPSVIIAYNYCFSTCL 601
SLYPS+++A+N C++T L
Sbjct: 636 SSLYPSIMMAHNLCYTTLL 654
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI LDF SLYPS+++A+N C++T L
Sbjct: 626 YDTPIATLDFSSLYPSIMMAHNLCYTTLL 654
>gi|46125595|ref|XP_387351.1| hypothetical protein FG07175.1 [Gibberella zeae PH-1]
Length = 1104
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 36/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR--- 411
E+++ S + + + + DPDI+ GY I + YLL+R L + + +RI ++ R
Sbjct: 369 EEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTRIPSMQSRAKE 428
Query: 412 -NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GR+ ++L +L++ + L+SYT ++ + L E+ +
Sbjct: 429 TNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCANFLGEQKEDVHHTM 488
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 489 ITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLS 543
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P++K A E +I EP Y PI LDF
Sbjct: 544 RGQQVKFISQLFRKALEQKLVI--PNLKSEASDEQYEGATVI-EPTRGYYDVPIATLDFA 600
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++ A+N C++T + + + +L+K ++ ++P+G F
Sbjct: 601 SLYPSIMQAHNLCYTTLVSKKA----------------IEAFNLQK-DEDYIVTPNGDTF 643
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R G+L ++L+E+L R K+ +
Sbjct: 644 VTIKQRKGLLAQILEELLSARKQAKREL 671
>gi|408397517|gb|EKJ76659.1| hypothetical protein FPSE_03209 [Fusarium pseudograminearum CS3096]
Length = 1104
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 36/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR--- 411
E+++ S + + + + DPDI+ GY I + YLL+R L + + +RI ++ R
Sbjct: 369 EEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTRIPSMQSRAKE 428
Query: 412 -NSSRDEVKNTQLQMP---GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N S ++ N + GR+ ++L +L++ + L+SYT ++ + L E+ +
Sbjct: 429 TNFSSKQMGNRDTKATNTNGRLQLDLLQLIQRDHQLRSYTLNSVCANFLGEQKEDVHHTM 488
Query: 468 LTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+T + E R L + + YL + RL+++L + +EMAR+ G+ F +LS
Sbjct: 489 ITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLS 543
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG Q + S + R + V P++K A E +I EP Y PI LDF
Sbjct: 544 RGQQVKFISQLFRKALEQKLVI--PNLKSEASDEQYEGATVI-EPTRGYYDVPIATLDFA 600
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS++ A+N C++T + + + +L+K ++ ++P+G F
Sbjct: 601 SLYPSIMQAHNLCYTTLVSKKA----------------IEAFNLQK-DEDYIVTPNGDTF 643
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V R G+L ++L+E+L R K+ +
Sbjct: 644 VTIKQRKGLLAQILEELLSARKQAKREL 671
>gi|332028725|gb|EGI68756.1| DNA polymerase delta catalytic subunit [Acromyrmex echinatior]
Length = 1010
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 24/242 (9%)
Query: 433 LWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVT 492
+ +L + L+SYT + YH L E+ K +T + + V Y ++
Sbjct: 365 MLEVLVRDYKLRSYTLNAVSYHFLQEQKEDVQHKDITGLQNGNAQTRRRLAV--YCLKDA 422
Query: 493 GI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIK 551
+ +RL+++L I EMAR+ G+ +L+RG Q +V S +LR +R +++ +
Sbjct: 423 YLPLRLLDKLMCIIIYMEMARVTGVSISSLLTRGQQIKVVSQLLRKTREKDYLM---PVH 479
Query: 552 QRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSD 611
Q ++EP+ Y DPI LDF SLYPS+I+A+N C++T L +
Sbjct: 480 QGHGTDEQFEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLTIAKKK---- 535
Query: 612 SFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+LN+ + +T +PS F+ S+R GILP++L+ +L R K +
Sbjct: 536 -------ELNIQ-------EDQITTTPSKSLFIKNSVRKGILPEILENLLVARKKAKTEL 581
Query: 672 KE 673
K+
Sbjct: 582 KQ 583
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R + D P + T F+ + Y DPI LDF SLYPS+I+A
Sbjct: 463 SQLLRKTREKDYLMPVHQGHGTDEQFEGATV--IEPKRGYYNDPIATLDFSSLYPSIIMA 520
Query: 131 YNYCFSTCL 139
+N C++T L
Sbjct: 521 HNLCYTTLL 529
>gi|224002805|ref|XP_002291074.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220972850|gb|EED91181.1| DNA polymerase, partial [Thalassiosira pseudonana CCMP1335]
Length = 999
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 55/337 (16%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVL------GLNLNQELSRI--TEVEKR-----NSSRD 416
D DI GY ++ YLL+R L L + + R+ T+ +KR +S+
Sbjct: 279 DADIFTGYNVQNFDIPYLLDRAEALWKKNDPKLRIFTQWGRVKNTQTKKRQQMFQSSAYG 338
Query: 417 EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-------HERIPLHSWKLLT 469
+NT+ + GR++ ++ ++ L SY+ ++ L H I + + T
Sbjct: 339 RRENTETTIEGRVIFDMLPYMQRNHKLSSYSLNSVCAEYLSQQKEDVHHSI-ISDLQNGT 397
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
HR +Y ++ L+ RL+++L + EMAR+ G+ ++SRG Q +
Sbjct: 398 DADRHRLAVY---CLKDALLPQ----RLMDKLSVLINYVEMARVTGVPVSFLISRGQQIK 450
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL--PLILEPESRLYTDPIIVLDFQSLYP 587
V S++LR R N V P+++ ++ A E +L+P Y PI LDF SLYP
Sbjct: 451 VFSMILRKCRDVNLVV--PTLR-KSGAGADEGYEGATVLDPIKSYYEVPIATLDFASLYP 507
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKS 647
S++ AYN C+ST + + E + S S +G FV +
Sbjct: 508 SIMQAYNLCYSTMVSQHEASKIDPS--------------------KYKRSENGHTFVHSN 547
Query: 648 IRCGILPKMLQEILDTRLMVKQSMKEY--KFSESLRN 682
++ GILP +L+E+L R K+ MK F +S++N
Sbjct: 548 VKKGILPIILEELLSARKRAKKDMKNAPNDFEKSVQN 584
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 143
Y PI LDF SLYPS++ AYN C+ST + + E
Sbjct: 493 YEVPIATLDFASLYPSIMQAYNLCYSTMVSQHE 525
>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
Length = 1115
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 157/334 (47%), Gaps = 45/334 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---- 409
+E E+ + + + + DPD++IGY + YLL+R L L SR+ V+
Sbjct: 372 DEGEMLMKWRDFLEEVDPDVIIGYNTSNFDFPYLLDRAKHLKLARFPYWSRLKTVQSKVD 431
Query: 410 ------KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP- 461
K+ +RD + NT GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 432 SSKFSSKQLGNRDTKTTNTN----GRLQLDLLQLIQRDHQLRSYTLNSVCAHFLKEQKED 487
Query: 462 -LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
HS +L R L + + YL + RL+++L + +EMAR+ G+ F
Sbjct: 488 VHHSMITELFNGDANSRRRLAVYCLKDAYLPQ-----RLLDKLMCLVNYTEMARVTGVPF 542
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
+L+RG Q R S + R + + + P + + ++EP+ Y P+
Sbjct: 543 NYLLARGQQVRFISQLFRKALDHQLIV--PDLPNQGDSTDQYEGATVIEPKRGYYKQPVA 600
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTIS 637
LDF SLYPS++ A+N C++T L + ++ LK K ++ ++
Sbjct: 601 TLDFASLYPSIMQAHNLCYTTWLDK------------------QTVEKLKMKKDEDYIVT 642
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
P+G F R G+L ++L+E+L R K+ +
Sbjct: 643 PNGDMFCTAKTRKGLLTQILEELLGARKKAKREL 676
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y P+ LDF SLYPS++ A+N C++T L +
Sbjct: 595 YKQPVATLDFASLYPSIMQAHNLCYTTWLDK 625
>gi|400602303|gb|EJP69905.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1106
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 150/313 (47%), Gaps = 35/313 (11%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR----NSSRDEVKNTQLQ- 424
DPDI+IGY I + YL+ R L +N + +R+ + R + S ++ N +
Sbjct: 385 DPDIIIGYNIANFDFPYLINRAKHLKVNGFEYWTRLPSIPSRVKDTSFSSKQIGNRDTKS 444
Query: 425 --MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRTHL 478
GR+ ++L +L++ + +L+SYT ++ L E+ ++T + E R L
Sbjct: 445 TNTNGRLQLDLLQLIQRDHHLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTPESRRRL 504
Query: 479 YKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLS 538
+ + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R +
Sbjct: 505 AIYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKA 559
Query: 539 RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFS 598
V P++K E +I EP Y PI LDF SLYPS++ A+N C++
Sbjct: 560 LEQKLVI--PNMKGDPSDDQYEGATVI-EPTRGYYDVPIATLDFASLYPSIMQAHNLCYT 616
Query: 599 TCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQ 658
T + R + + F + ++ ++P+G FV R G+L ++L+
Sbjct: 617 TLITRKDRIA-----QFNLVK-----------DEDYIVTPNGDMFVTTKQRKGLLAQILE 660
Query: 659 EILDTRLMVKQSM 671
E+L R K+ +
Sbjct: 661 ELLSARKQAKREL 673
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLG 146
Y PI LDF SLYPS++ A+N C++T + R + +
Sbjct: 591 YDVPIATLDFASLYPSIMQAHNLCYTTLITRKDRIA 626
>gi|403221257|dbj|BAM39390.1| DNA polymerase delta catalytic subunit [Theileria orientalis strain
Shintoku]
Length = 1072
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR--- 411
E +L + + + Q DPD L GY I YLL R VL + ++++RI
Sbjct: 342 EDQLLLAWSDFLVQVDPDFLTGYNIIVFDLPYLLTRSTVLNIERFKKITRIRSTSSNFKD 401
Query: 412 ----NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
N+ +N + + GRI+ +++ L+R + L+SYT + + L ++ +
Sbjct: 402 AIVSNNMMGTYENKDINIEGRIMFDVYDLVRRDHKLKSYTLNYVSFEFLGQQKEDVHYST 461
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
++ + T + + L + LI +L + EMAR+ +++RG Q
Sbjct: 462 IS-KLQQGTSSDRRRIASYCLKDAILPLLLINKLLLVFNYVEMARVTSTPIKFLITRGQQ 520
Query: 528 FRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSL 585
RV + R R +V +S + + ++ E +L+P+ +T+PI VLDFQSL
Sbjct: 521 IRVTMQIYRQCRKMKYVIPVISSAGRHGSNENNYEG-ATVLDPQKGYHTNPIAVLDFQSL 579
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS--GVAF 643
YPS++IAYN C+ST + + + L ++++T P + F
Sbjct: 580 YPSIMIAYNLCYSTLVPQN--------------------KILNHPEEDVTRIPGYIDLCF 619
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V + R GILP +++ +++ R K+ M
Sbjct: 620 VKATKRKGILPIIVENLIEARRKAKKMM 647
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+T+PI VLDFQSLYPS++IAYN C+ST +
Sbjct: 567 HTNPIAVLDFQSLYPSIMIAYNLCYSTLV 595
>gi|296420586|ref|XP_002839850.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636056|emb|CAZ84041.1| unnamed protein product [Tuber melanosporum]
Length = 1067
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 154/326 (47%), Gaps = 48/326 (14%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL----------NLNQEL 402
+NE ++ + + + + DPD++IGY I + YLL+R L L N+ E
Sbjct: 343 NNEGKMLISWSQFLHEADPDVIIGYNIANFDFPYLLDRAKYLKLVEFPYWTRLRNVKSEA 402
Query: 403 SRITEVEKRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
K+ +RD + NT GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 403 KDSNFSSKQMGNRDTKATNTN----GRLQLDLLQLVQRDFQLRSYTLNSVSAHFLGEQKE 458
Query: 462 --LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
HS +L + R L + + YL + RL+++L + +EMAR+ G+
Sbjct: 459 DVHHSMITELQNGTADSRRRLAVYCLKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVP 513
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
F +LSRG Q + S + R ++ V P++ + E +I EPE Y PI
Sbjct: 514 FNYLLSRGQQIKFISQLYRKAKEQKLVV--PNLPPQGGDDQYEGATVI-EPERGYYDVPI 570
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGR--VEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
LDF SLYPS++ A+N C++T + + + LG+ +
Sbjct: 571 ATLDFASLYPSIMQAHNLCYTTLVKKETCDRLGLQKDIDY-------------------E 611
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEIL 661
I+P+G FV R G++P +L+ +L
Sbjct: 612 ITPNGDRFVKAHRRKGMVPLILEALL 637
>gi|62954913|gb|AAY23282.1| Similar to dna polymerase delta catalytic subunit (ec 2.7.7.7)
[Oryza sativa Japonica Group]
Length = 629
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
RL+++L +I EMAR+ G+ +LSRG +V S +LR ++ N V P+IK +A
Sbjct: 49 RLLDKLMYIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVI--PNIKGQAS 106
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
+ +LE + Y PI LDF SLYPS+++AYN C+ T + P
Sbjct: 107 GQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVP-----------PE 155
Query: 616 GCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
LN+ S+ K +PSG FV ++ GILP++L+E+L R K +KE K
Sbjct: 156 DARKLNLPPESVNK-------TPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAK 208
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSV 127
S L R K + P K +++ D F ++ +R Y PI LDF SLYPS+
Sbjct: 85 SQLLRKAKQKNLVIPNIKGQAS----GQDTFEGATVLEARAGFYEKPIATLDFASLYPSI 140
Query: 128 IIAYNYCFST 137
++AYN C+ T
Sbjct: 141 MMAYNLCYCT 150
>gi|313225943|emb|CBY21086.1| unnamed protein product [Oikopleura dioica]
Length = 1062
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 165/390 (42%), Gaps = 46/390 (11%)
Query: 293 GQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV 352
G++ PE P+ + ++N Q DP + S ++ H
Sbjct: 278 GRKGVFPEAEHDPVIQ---------IACMVQN--QGDPSPFVRMIFTLNSCSPIVGNHVF 326
Query: 353 SNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQELS 403
EKE + F E +R DPDI+ GY I YL+ R L + LS
Sbjct: 327 CYEKEIDMLEGFAELMRLVDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGRIRSNLS 386
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++ + + + + ++ + GRI +++ + L+SY + YH L E+
Sbjct: 387 KVKDAKFSSKQMGTREYKEVNIDGRIQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDV 446
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + V Y ++ + +RL+++L F+ T EMAR+ GI +L
Sbjct: 447 HHSIISDLQAGTDSDRRRLAV--YCLKDALLPLRLMDKLMFVVNTMEMARVTGIPLSYLL 504
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG +V + +LR S + + V +Q +++P Y +PI LDF
Sbjct: 505 TRGQSVKVMAQLLRESSIRDLVMPVLKTEQSDQYEGA----TVIDPIRGYYKEPITTLDF 560
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS++ A+N C++T L D+ F +P+G
Sbjct: 561 ASLYPSIMRAHNLCYTTLLSNKNERSKLDTSQF-------------------IKTPTGDE 601
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +R G+LP +L+ +L+ R K+ +K
Sbjct: 602 FVKPEVREGLLPLILKNLLEARGKAKKELK 631
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 98 SDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
SD + ++ D + Y +PI LDF SLYPS++ A+N C++T L
Sbjct: 535 SDQYEGATVIDPIRGYYKEPITTLDFASLYPSIMRAHNLCYTTLL 579
>gi|354497678|ref|XP_003510946.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cricetulus
griseus]
Length = 1070
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 164/389 (42%), Gaps = 74/389 (19%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
R ++++ Q +V + +++ V + + L L
Sbjct: 424 ------RSNIRDSSFQ-------------SRQVGRRDSKVVSMVGRVQMDMLTL----LG 460
Query: 469 TCWWEH-RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
T W E R L + + +L +RL+E+L + EMAR+ G+ +LSRG Q
Sbjct: 461 TNWKEQTRRRLAVYCLKDAFLP-----LRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQ 515
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
+V S +LR + + P +K + ++EP Y PI LDF SLYP
Sbjct: 516 VKVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYP 571
Query: 588 SVIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
S+++A+N C++T L G + LG+ D F +P+G FV
Sbjct: 572 SIMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------IKTPTGDEFV 610
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S+R G+LP++L+ +L R K + +
Sbjct: 611 KSSVRKGLLPQILENLLSARKRAKAELAQ 639
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 557 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 600
>gi|339245491|ref|XP_003378671.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
gi|316972406|gb|EFV56084.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
Length = 1069
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 147/323 (45%), Gaps = 55/323 (17%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITE---------VEKRNSSRD 416
VR+ DPDI+ GY I+ YL++R L + + RI + V+ R R
Sbjct: 376 VREVDPDIITGYNIQNFDLPYLIDRAQTLSVKDFAFIGRIKDQKTVVHSSNVQSRQMGRR 435
Query: 417 EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRT 476
E N + GRI +L ++L + L+SYT + +H L E+ + ++T
Sbjct: 436 E--NKLCNIEGRIQFDLLQILFRDYKLRSYTLNAVSFHFLQEQKEDVHYSIITDLQNGNE 493
Query: 477 HLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQ------FYEVLSRGSQFR 529
+ + V Y ++ + +RL+++L + F ++ ++GSQ R
Sbjct: 494 QTRRRLAV--YCLKDAYLPLRLLDKL--MSSDGCHCEQFAYSWSTDQSYFTTDAQGSQTR 549
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
+++ L P++ R+ + + ++EP Y PI+ LDF SLYPS+
Sbjct: 550 EQNLFL------------PAV--RSEVGEDYTGATVIEPIKGYYNKPIVTLDFASLYPSI 595
Query: 590 IIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIR 649
++A+N C++T + + ++RS + ++ +PSG FV K
Sbjct: 596 MMAHNLCYTTLI------------------MQETVRS-QLSPEDYIKTPSGHYFVKKDKC 636
Query: 650 CGILPKMLQEILDTRLMVKQSMK 672
G+LP++L+ +L R VKQ MK
Sbjct: 637 KGLLPEILENLLAARKAVKQQMK 659
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y PI+ LDF SLYPS+++A+N C++T +
Sbjct: 579 YNKPIVTLDFASLYPSIMMAHNLCYTTLI 607
>gi|389634743|ref|XP_003715024.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351647357|gb|EHA55217.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440470521|gb|ELQ39588.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae Y34]
gi|440488502|gb|ELQ68227.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae P131]
Length = 1103
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 36/330 (10%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE--- 409
S E+++ S + + + DPDI+ GY I + YLL+R L + SRI ++
Sbjct: 366 SQEQKMLSSWRNFMVEVDPDIITGYNIANFDFPYLLDRARHLKVKDFDLWSRIPSIKSVA 425
Query: 410 -KRNSSRDEVKNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ N S ++ N + + GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 426 KESNFSSKQMGNRDTKATNINGRLQLDLLQLIQRDHQLRSYTLNSVCSHFLGEQKEDVHH 485
Query: 466 KLLTCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
++T + E R L + + YL + RL+++L + +EM+R+ G F +
Sbjct: 486 TMITELFNGTPESRRRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMSRVTGAPFNFL 540
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L+RG Q R S + R + V + S++ + ++EP Y P+ LD
Sbjct: 541 LTRGQQVRFLSQLFRKALEQKLVIPNLSVQSSDEQYEGAT---VIEPTRGYYDVPVATLD 597
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS++ A+N C++T + + D+F LKK ++ ++P+G
Sbjct: 598 FASLYPSIMQAHNLCYTTLVTK----KAIDAF------------GLKK-DEDYIVTPNGD 640
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV R G+L ++L+E+L R K+ +
Sbjct: 641 FFVTIKQRKGLLAQILEELLAARKQAKREL 670
>gi|428673126|gb|EKX74039.1| DNA polymerase delta catalytic subunit, putative [Babesia equi]
Length = 1030
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 43/334 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E +L + + R DPD + GY I YL+ R VL L +L RI + + +
Sbjct: 335 SEDQLLLAWSDFFRYVDPDFVTGYNIINFDIPYLITRASVLNLERFSQLPRIKK--QMTT 392
Query: 414 SRDEV---------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLH 463
+D + +N + + GRI+ +++ L+R + L+SYT + + L ++ +H
Sbjct: 393 FKDAIVSNNIMGTYENKDINIEGRILFDVYDLVRRDHKLKSYTLNYVSFEFLKQQKEDVH 452
Query: 464 S---WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
KL R + + ++ ++ + I +L+ +++ EMAR+
Sbjct: 453 YSTIAKLQLGSSADRRRIASY-CLKDGILPLLLIEKLLLLYNYV----EMARVTSTPIKM 507
Query: 521 VLSRGSQFRVESIMLRLSRLNNF-VAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
++SRG Q RV + R ++ + V V + + A A +L+P+ + PI V
Sbjct: 508 LISRGQQIRVTMQIYRQCKIMRYAVPVLSTGSRNASNEAGYEGGTVLDPQRGYHKQPIAV 567
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDFQSLYPS++IA+N C+ST + E D +P +++T P
Sbjct: 568 LDFQSLYPSIMIAHNLCYSTLIPTSE----VDKYP----------------PEHVTRVPG 607
Query: 640 --GVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
G+ F+ S+R G+LP ++ +++ R K+ M
Sbjct: 608 HEGLCFIKSSVRTGVLPIIVSNLIEARKRAKKLM 641
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+ PI VLDFQSLYPS++IA+N C+ST +
Sbjct: 561 HKQPIAVLDFQSLYPSIMIAHNLCYSTLI 589
>gi|330507958|ref|YP_004384386.1| DNA polymerase 2 [Methanosaeta concilii GP6]
gi|328928766|gb|AEB68568.1| DNA polymerase 2 [Methanosaeta concilii GP6]
Length = 891
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 159/336 (47%), Gaps = 42/336 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NE EL + F +R ++PDI+ GY + YL ER L+ V + S
Sbjct: 235 NEYELLNQFAAIIRDYNPDIIAGYNSNDFDFPYLQERAKQQQLDFR--------VGRDGS 286
Query: 414 S---RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLH-ERIPLHSWKLLT 469
S + V + + + GR+V++L ++R +L+ YT N+ +L E+ ++ ++
Sbjct: 287 SWYIKKIVNRSDVSITGRVVVDLLPIIRSSFSLKQYTLRNVAAELLSMEKYDVNPQEIEE 346
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
W E + + +RL+ L + + ++R G ++++ G
Sbjct: 347 LWAEESNGEGLKRFISYSRRDSVLALRLLLDLRLMDKYIALSRASGSLLQDIVNGGQSGM 406
Query: 530 VESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYTDPIIVLDFQSL 585
VE+++LR R + V + R E+ L +L PE L D +++LD++SL
Sbjct: 407 VENLLLRRFREISRVVPPKPDSGLSDERYVENEELKGGAVLVPEKGLVED-VVILDYKSL 465
Query: 586 YPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
YP++++A+N C+ST + ++DS ++++ SPSG +FV
Sbjct: 466 YPTIMMAHNLCYSTVV-------LADS----------------PEKKDIITSPSGGSFVS 502
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLR 681
++ G++P++L+E+LD R K+ MK K SE R
Sbjct: 503 PNVSSGVMPQVLKELLDQRTETKRLMK--KASEEER 536
>gi|53759071|gb|AAC26681.2| DNA polymerase catalytic subunit [Hawaiian green turtle
herpesvirus]
Length = 1091
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 154/357 (43%), Gaps = 60/357 (16%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG--YVLGLNLNQELSRITEVEKR 411
+E EL F +Q+ P+ L GY I +L+ + Y L L+ L R +
Sbjct: 384 SEYELLLAFFTFFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKLDGYGRLERGGQFRII 443
Query: 412 NSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ S + KN ++++ G + ++++ LLR +++L +Y + + VL E S+K +
Sbjct: 444 DLSENRFQKNIKVRINGTVTLDVYPLLRGKLSLPNYKLDTVCREVLGETKRDVSYKEIPA 503
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ E R L + + L+ +RL E+ SE+A+L + V++ G
Sbjct: 504 LYGQGPEGRGLLGDYCLQDSALV-----LRLFEKFAPHVEMSEVAKLAHLPMNRVMTDGQ 558
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----------------------- 563
Q RV + +L+ +R ++ +A + P+ P
Sbjct: 559 QIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDLSPSLNGPEEGTEEENETENGAYTGD 618
Query: 564 ------LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 617
+LEPE+ Y DP+ V DF SLYPS+I A+N CF+T R E
Sbjct: 619 KGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAE------------ 666
Query: 618 IDLNVSIRSLKKLQQNLTISPSGVA--FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+++ LK + G++ +V +R +L ++L + L R ++ SMK
Sbjct: 667 -----TLKELKAGEDYEEFKVQGMSLFYVKPHVRRSLLGELLTDWLALRKKIRASMK 718
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+ V DF SLYPS+I A+N CF+T R E L
Sbjct: 633 FYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAETL 668
>gi|432329153|ref|YP_007247297.1| DNA polymerase elongation subunit (family B) [Aciduliprofundum sp.
MAR08-339]
gi|432135862|gb|AGB05131.1| DNA polymerase elongation subunit (family B) [Aciduliprofundum sp.
MAR08-339]
Length = 778
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 155/341 (45%), Gaps = 47/341 (13%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
+E+E+ FIE ++ DPD++ GY I+ L +R G+ + + +
Sbjct: 193 GDEEEILWKFIEVIKNEDPDVITGYNIDGYDLELLSDRYKKYGMEFS--------IGRDG 244
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPLHSWKLLTCW 471
S V ++ GR++ + W ++ E+ L+ T + + H+ E ++ + + W
Sbjct: 245 SKPQRVVGQFWRVHGRVIEDAWWAVKKELRLKQETLQAVAMHLFGEGKLDVDRTNIDEEW 304
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
+ + + ++ + L +R++ ++ I + ++A + +V+ G+ V+
Sbjct: 305 KKDKEKVMEYCKKDAELA-----LRILMKIGIIDKYLDLATVTKFPLDDVIHSGTSTWVD 359
Query: 532 SIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVII 591
S+++R + + + V ++R + +EP LY + VLDF+S+YPS+II
Sbjct: 360 SLLIREADRHG-IGVPLQGQERKRGKIEGGYVHTIEPG--LY-HWVCVLDFKSMYPSIII 415
Query: 592 AYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCG 651
YN CF+T ++ +SP+GV F+ K R G
Sbjct: 416 KYNICFTTL-----------------------------SREGEIVSPTGVRFLSKERREG 446
Query: 652 ILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
++PK+L+E++D R +K+ M+E K E R L + I
Sbjct: 447 LIPKILKELMDKRDTLKRMMREAKNDEERRYYDGLQKAVKI 487
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 115 IIVLDFQSLYPSVIIAYNYCFST 137
+ VLDF+S+YPS+II YN CF+T
Sbjct: 401 VCVLDFKSMYPSIIIKYNICFTT 423
>gi|168804095|ref|YP_001687027.1| DNA polymerase-like protein [Glossina pallidipes salivary gland
hypertrophy virus]
gi|146164283|gb|ABQ08852.1| DNA polymerase-like protein [Glossina pallidipes salivary gland
hypertrophy virus]
Length = 953
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 160/354 (45%), Gaps = 34/354 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGL-------NLNQELSRIT 406
NE L F ++ + DI+ GY ++ Y+ R +LGL N+ ++ I+
Sbjct: 271 NEVHLLIQFANSINYNNVDIMTGYNMKNFDLMYIYNRMKLLGLLRHTVNWNMQKKQLYIS 330
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ +K ++ + + + G ++I+++ + L+SY +++ L H K
Sbjct: 331 KCQKYSNQQGTRDSINTNIFGFVIIDMFEYISSNFKLRSYKLNDVVGVFLR-----HGEK 385
Query: 467 LLTCWWEHRTHLYKWMTVE--HYLIRVTGIIRLIEQLDFIGRTS-----EMARLFGIQFY 519
L +++ + + + E H+L+ + + I R++ +A + I
Sbjct: 386 KLDIDYKNISVFHDRGSKEDCHHLLDYCAVDAELCNSLLINRSTYSNVFAVAHICHIPIR 445
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
V+ RG Q R+ S+M + + +R + ++EP+ Y I
Sbjct: 446 YVIDRGQQIRIYSMMCEYIWRQDIYTIPLVTGRRVQSKYNYEGARVIEPKKGFYNTAIAT 505
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP- 638
LDF SLYPS++I YN C++T + + + P G +D SI +K N I P
Sbjct: 506 LDFASLYPSIMIGYNMCYTTLIQGI-------TTPPGHVD---SINLVKYNGLNCRIVPG 555
Query: 639 -SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
S VAFVD S R GILP +L+ +L +R V++ MK + L +++SM L
Sbjct: 556 TSRVAFVDCSEREGILPSILKVLLQSRAEVRKKMKTITDKDE---LALMDSMQL 606
>gi|320586772|gb|EFW99435.1| DNA polymerase delta catalytic subunit [Grosmannia clavigera
kw1407]
Length = 1105
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 47/337 (13%)
Query: 370 DPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE----------KRNSSRDEVK 419
DPDI+ GY I + YLL+R L + + +RI + K+ SRD K
Sbjct: 385 DPDIITGYNISNFDFPYLLDRAKHLKVGGFEYWTRIPSMRSQSKDTNLSSKQMGSRD-TK 443
Query: 420 NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHR 475
T + GR+ ++L +L++ + +L+SYT ++ H L E+ ++T + E+R
Sbjct: 444 ATNIN--GRLQLDLLQLIQRDHHLRSYTLNSVCSHFLGEQKEDVHHTMITELFNGTPENR 501
Query: 476 THLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
L + + YL + RL+++L + +EMAR+ G+ F +LSRG Q + S +
Sbjct: 502 RRLALYCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLF 556
Query: 536 RLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNY 595
R + V P+++ + E +I EP Y P+ LDF SLYPS++ A+N
Sbjct: 557 RKAMDQKLVV--PNVQPKGSEEQYEGATVI-EPVRGFYKVPVATLDFASLYPSIMQAHNL 613
Query: 596 CFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGVAFVDKSIRCGILP 654
C++T + N +I + K + ++P+ FV R G+L
Sbjct: 614 CYTTLVN------------------NAAIEAFGLKKDVDYIVTPNKDKFVTTKQRKGLLA 655
Query: 655 KMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
++L+E+L R KQ+ +E +LN L
Sbjct: 656 QILEELLAAR---KQARRELAMETDPFKKAVLNGRQL 689
>gi|157061824|gb|ABV03812.1| DNA polymerase [Papio hamadryas lymphocryptovirus 3]
Length = 751
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRKRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ P+ R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPAASDRDGYQGAT----VIQPRSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 94 SSFDSDMFPSSS---SRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
++ D D + ++ R Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 556 AASDRDGYQGATVIQPRSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|52493135|gb|AAU81565.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 673
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 153/357 (42%), Gaps = 60/357 (16%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG--YVLGLNLNQELSRITEVEKR 411
+E EL F +Q+ P+ L GY I +L+ + Y L L+ L R +
Sbjct: 57 SEYELLLAFFTFFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKLDGYGRLERGGQFRII 116
Query: 412 NSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ S + KN ++++ G + ++++ LLR +++L Y + + VL E S+K +
Sbjct: 117 DLSENRFQKNIKVRINGTVTLDVYPLLRGKLSLPDYKLDTVCREVLGETKRDVSYKEIPA 176
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ E R L + + L+ +RL E+ SE+A+L + V++ G
Sbjct: 177 LYGQGPEGRGLLGDYCLQDSALV-----LRLFEKFAPHVEMSEVAKLAHLPMNRVMTDGQ 231
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----------------------- 563
Q RV + +L+ +R ++ +A + P+ P
Sbjct: 232 QIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDLSPSLNGPEEGTEEENETENGAYTGD 291
Query: 564 ------LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 617
+LEPE+ Y DP+ V DF SLYPS+I A+N CF+T R E
Sbjct: 292 KGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAE------------ 339
Query: 618 IDLNVSIRSLKKLQ--QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+++ LK + + + + +V +R +L ++L + L R ++ SMK
Sbjct: 340 -----TLKELKAGEDYEEFKVQGMSLFYVKPHVRRSLLGELLTDWLALRKKIRASMK 391
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+ V DF SLYPS+I A+N CF+T R E L
Sbjct: 306 FYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAETL 341
>gi|52493129|gb|AAU81562.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 673
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 159/369 (43%), Gaps = 57/369 (15%)
Query: 339 ETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNL 398
ET S ++E +E EL F +Q+ P+ L GY I +L+ + L L
Sbjct: 45 ETASSATVIE---CDSEYELLLAFFTFFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKL 101
Query: 399 NQ----ELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYH 454
+ E + V + +R + KN ++++ G + ++++ LLR +++L +Y + +
Sbjct: 102 DGYGRLERGGLFRVIDLSENRFQ-KNIKVRINGTVTLDVYPLLRGKLSLPNYKLDTVCRE 160
Query: 455 VLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLF 514
VL E S+K + + R + + ++ L + RL E+ SE+A+L
Sbjct: 161 VLGETKRDVSYKEIPALY-GRGPEGRGLLGDYCLQDSALVCRLFEKFAPHVEMSEVAKLA 219
Query: 515 GIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----------- 563
+ V++ G Q RV + +L+ +R ++ +A + P+ P
Sbjct: 220 HLPMNRVMTDGQQIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPDEGTEE 279
Query: 564 ------------------LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 605
+LEPE+ Y DP+ V DF SLYPS+I A+N CF+T R E
Sbjct: 280 ENETENGAYKRDKGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAE 339
Query: 606 HLGVSDSFPFGCIDLNVSIRSLKKLQ--QNLTISPSGVAFVDKSIRCGILPKMLQEILDT 663
+++ LK + + + + +V +R +L ++L + L
Sbjct: 340 -----------------TLKELKAGEDYEEFKVQGMSLYYVKPHVRRSLLGELLTDWLAL 382
Query: 664 RLMVKQSMK 672
R ++ SMK
Sbjct: 383 RKKIRASMK 391
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+ V DF SLYPS+I A+N CF+T R E L
Sbjct: 306 FYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAETL 341
>gi|116199119|ref|XP_001225371.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178994|gb|EAQ86462.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1104
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 158/327 (48%), Gaps = 35/327 (10%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI---TEVEKR 411
E ++ S + + + DPDI+ GY I + YL++R L + SR + ++
Sbjct: 369 EDQMLSAWRNFLMEVDPDIITGYNIANFDFPYLIDRAKHLKVRDFDYWSRTRVRSYSKES 428
Query: 412 NSSRDEVKNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
N S ++ N + + GR+ ++L +L++ + L+SYT ++ H L E+ ++
Sbjct: 429 NFSSKQMGNRDTKVTNISGRLQLDLLQLIQRDHQLRSYTLNSVSSHFLGEQKEDVHHSMI 488
Query: 469 TCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
T +E R L + + YL + RL+E+L + +EMAR+ G+ F +L+R
Sbjct: 489 TELFEGTPESRRRLALYCLKDAYLPQ-----RLMEKLSCLENYTEMARVTGVPFNFLLAR 543
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q + S + R + V P++ + E +I +P Y PI LDF S
Sbjct: 544 GQQVKFLSQLCRKALEQKLVI--PNMTTESSEEQYEGATVI-DPIKNYYDVPIATLDFAS 600
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS++ A+N C++T + + + + +LKK ++ ++PSG FV
Sbjct: 601 LYPSIMQAHNLCYTTLIKKKD----------------IERWNLKK-DEDYIVTPSGDMFV 643
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
R G+L ++L+E+L R K+ +
Sbjct: 644 TSKQRKGLLAQILEELLSARKQAKREL 670
>gi|384253110|gb|EIE26585.1| DNA/RNA polymerase [Coccomyxa subellipsoidea C-169]
Length = 1425
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 179/410 (43%), Gaps = 68/410 (16%)
Query: 305 PIQMNFVSNEKELFSTFIENVRQ-------WDPDILIGYEIETFSWGYLLERHFVSNEKE 357
P+ ++ + E + + R+ W P + + + S + H +E+
Sbjct: 572 PVIVDLTTTEGHTPQVPVPSAREGGAAVFTWSPGVR-AHTVRQVSPRGVTRMHVHPSEEA 630
Query: 358 LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQ-ELSRITEVEKRN---- 412
+ +++ +R+ DPDIL +++ + G L ER L LN LSR+ + +
Sbjct: 631 MLQAWLQWLRKADPDILNVFQVRD-TLGALAERFTALKLNSGGLHLSRLKRMHGKALALK 689
Query: 413 ----------SSRDEVKNTQLQ-------MPGRIVINLWRLLRHEVNLQSYTFENIMYHV 455
S++ + +T Q M GR+V+++ R NL S++ + +
Sbjct: 690 RIVMYSPAWVKSQNRMASTSNQETFRVEHMEGRVVLDVLRHALTACNLASFSLVDCCQSL 749
Query: 456 LHERI----PLHSWKLLTCWWEHRT---HLYKWMTVEHYLIRVTGIIR-LIEQLDFIGRT 507
L R+ P +L + R+ + Y G++R L+++L +
Sbjct: 750 LSRRMEVLPPSAITRLSSLSNPARSKGEQAADRARLASYAADRVGVVRALLQRLATLPEA 809
Query: 508 SEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILE 567
E+ R+ G+ +VL R S++LR ++ + ++ + R P ++
Sbjct: 810 IEIGRVTGLTLGQVLYNAQMIRTWSLLLRNAQRSGYI-----VSGRQDALPLSESPYLMH 864
Query: 568 P-ESR---LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
P E++ LY P+ +LDF SLYPS+ AYN C++T L H S++F
Sbjct: 865 PVETKNVGLYQSPVAILDFASLYPSLYRAYNLCYTTLL----HPDDSNAF---------- 910
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ +++T++P+G +V IR GILP +L +++ R + ++KE
Sbjct: 911 ------VPEHVTVTPTGDVYVKPEIRKGILPSILAALINARAATRAALKE 954
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 100 MFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
M P + LY P+ +LDF SLYPS+ AYN C++T L
Sbjct: 863 MHPVETKNVGLYQSPVAILDFASLYPSLYRAYNLCYTTLL 902
>gi|313247101|emb|CBY35929.1| unnamed protein product [Oikopleura dioica]
Length = 852
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 165/390 (42%), Gaps = 46/390 (11%)
Query: 293 GQESELPEVRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFV 352
G++ PE P+ + ++N Q DP + S ++ H
Sbjct: 278 GRKGVFPEAEHDPVIQ---------IACMVQN--QGDPSPFVRMIFTLNSCSPIVGNHVF 326
Query: 353 SNEKE--LFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN-------LNQELS 403
EKE + F E +R DPDI+ GY I YL+ R L + LS
Sbjct: 327 CYEKEIDMLEGFAELMRLVDPDIITGYNIMNFDTSYLVNRANTLKSQNFGYLGRIRSNLS 386
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
++ + + + + ++ + GRI +++ + L+SY + YH L E+
Sbjct: 387 KVKDAKFSSKQMGTREYKEVNIDGRIQLDVMVSIVQNYKLRSYNLNAVSYHFLKEQKEDV 446
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+++ + + V Y ++ + +RL+++L F+ T EMAR+ G+ +L
Sbjct: 447 HHSIISDLQAGTDSDRRRLAV--YCLKDALLPLRLMDKLMFVVNTMEMARVTGVPVSYLL 504
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+RG +V + +LR S + + V +Q +++P Y +PI LDF
Sbjct: 505 TRGQSVKVMAQLLRESSIRDLVMPVLKTEQSDQYEGA----TVIDPIRGYYKEPITTLDF 560
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS++ A+N C++T L D+ F +P+G
Sbjct: 561 ASLYPSIMRAHNLCYTTLLSNKNERSKLDTSQF-------------------IKTPTGDE 601
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
FV +R G+LP +L+ +L+ R K+ +K
Sbjct: 602 FVKPEVREGLLPLILKNLLEARGKAKKELK 631
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 98 SDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
SD + ++ D + Y +PI LDF SLYPS++ A+N C++T L
Sbjct: 535 SDQYEGATVIDPIRGYYKEPITTLDFASLYPSIMRAHNLCYTTLL 579
>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
Length = 1060
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 61/402 (15%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDPDILI-GYEIETFSWGYLLER 349
G++ PE + P IQ+ N V+ + E FI NV I G ++ +F
Sbjct: 278 GRQGIFPEAQIDPVIQIANMVTRQGE-SKPFIRNVFTLKSCAHIAGSQVLSFE------- 329
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE 409
+E ++ + + + V + DPD++IGY YL++R L L R+ V+
Sbjct: 330 ----DESKMLNAWRDFVEEADPDVVIGYNTSNFDIPYLMDRAKALKATKFCYLGRMKNVK 385
Query: 410 ----------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
K +RD + M GR+ ++L +L++ E L+SY+ ++ L E+
Sbjct: 386 SEVGTSHFSSKAYGTRD---SKTTNMEGRLQLDLLQLIQREHKLRSYSLNSVCAEFLGEQ 442
Query: 460 IP--LHS--WKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS +L E R L + + YL + RL+++L + +EMAR+ G
Sbjct: 443 KEDVHHSIITELQNGTPESRRRLAVYCLKDAYLPQ-----RLLDRLMSLVNQTEMARVTG 497
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +L++G +V S + R ++++ ++ P+++ E +I EP Y
Sbjct: 498 VPFNYLLAKGQSIKVMSQICRQAQVHGYLV--PALRVEGSDEQYEGATVI-EPRRGYYDV 554
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLG--RVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
PI LDF SLYPS+++A+N C++T L VE L + + ++
Sbjct: 555 PITTLDFSSLYPSIMMAHNLCYTTLLDPQTVERLKLKEG-------------------ED 595
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+P+ FV R G+LP +LQ+++ R + +K K
Sbjct: 596 YIKTPNNDMFVTPVKRKGLLPVVLQDLISARKRARADIKSEK 637
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R Y PI LDF SLYPS+++A+N C++T L
Sbjct: 548 RRGYYDVPITTLDFSSLYPSIMMAHNLCYTTLL 580
>gi|302850307|ref|XP_002956681.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f.
nagariensis]
gi|300258042|gb|EFJ42283.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f.
nagariensis]
Length = 991
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 159/350 (45%), Gaps = 43/350 (12%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLL 347
G++ PE + P+ M VS E ++NV ++G E+ +F
Sbjct: 197 GRKGCFPEAKIDPVIQIASMVSVSGRTE--GPVVKNVMTLGSCAPIVGAEVMSFD----- 249
Query: 348 ERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL----- 402
+EK++ + + + + DPDI+IGY I YL ER L + ++
Sbjct: 250 ------DEKDMLLRWRDLLIESDPDIIIGYNILNFDLPYLYERADALKIGAKFQVWGRVR 303
Query: 403 ---SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+R+ + + + + + + + GR+ +L ++ + L SY+ ++ H L E+
Sbjct: 304 GSHTRMRDSQFSSKAYGTHEYKDITIEGRVQFDLLTAIQRDHKLSSYSLNSVSAHFLGEQ 363
Query: 460 IP--LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
HS L E R L + + YL + RL+++L + EMAR+ G
Sbjct: 364 KEDVHHSAIADLQAGNEETRRRLAVYCLKDAYLPQ-----RLLDKLMYTYNYIEMARVTG 418
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL----PLILEPESR 571
+ +L+RG +V S +LR +++ +FV P+IK + + +LEP+
Sbjct: 419 VPLSYLLTRGQSIKVFSQLLRKAQVKDFVI--PNIKVTGPANGGDGVGYEGATVLEPKIG 476
Query: 572 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCID 619
Y P+ LDF SLYPS+++A+N C++T + R+ + V D C D
Sbjct: 477 FYERPVATLDFASLYPSIMMAHNLCYTTLVPNDRLATVPVEDRAQSPCGD 526
>gi|386002196|ref|YP_005920495.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
gi|357210252|gb|AET64872.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
Length = 931
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 141/328 (42%), Gaps = 42/328 (12%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
E+ + + F+E ++ +DPD+L GY + YL ER LN E+ R+
Sbjct: 257 GGERAMLARFVEILKDYDPDVLAGYNSAEFDFPYLEERAR----RLNVEV-RVGRDGGPW 311
Query: 413 SSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL----HERIPLHSWKLL 468
R V T++++ GRIV++L L+R +L+ YT N +L H+ P L
Sbjct: 312 RVRKIVNQTRVEITGRIVVDLLPLVRSSFSLKRYTLRNASLELLGVEKHDVDPKEMEALW 371
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
T + L + + YL + + +A+ G +V+ G
Sbjct: 372 TSSGDDFARLVSYSRRDSYLALHLLTDLQLLD-----KYIALAQTSGSLLQDVIDGGQTG 426
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYTDPIIVLDFQS 584
VE+ + R + V + RA +S L +LEP+ L D +++LD++S
Sbjct: 427 MVENFLFRKFQERGRVIPPKPDADLSSARAAQSSELKGGEVLEPKKGLVED-VLILDYRS 485
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C+ST V+D P + PSG FV
Sbjct: 486 LYPSIMMAHNLCYSTV--------VTDERP---------------PSGGVVKPPSGGEFV 522
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMK 672
GI+P +L ++L R +K+ MK
Sbjct: 523 LPGEAPGIVPGVLSDLLAQRTDIKRRMK 550
>gi|159463358|ref|XP_001689909.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
gi|158283897|gb|EDP09647.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
Length = 1091
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 155/330 (46%), Gaps = 37/330 (11%)
Query: 293 GQESELPEVRTKP-IQM-NFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLER 349
G++ PE + P IQ+ + VS ++ ++N+ ++G E+ +F+
Sbjct: 302 GRKGCFPEAKIDPVIQIASMVSVSGKMDGPVVKNIMTLGSCASIVGAEVMSFN------- 354
Query: 350 HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL------- 402
+E E+ + + + + DPDI+IGY I YL ER L + ++
Sbjct: 355 ----DEAEMLLRWRDLLVESDPDIIIGYNILNFDLPYLYERADALKIGKKFQVWGRVRGS 410
Query: 403 -SRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+R+ + + + + + + + GR+ +L ++ + L SY+ ++ H L E+
Sbjct: 411 HTRMRDGQFSSKAYGTHEYKDITIEGRVQFDLLTAIQRDHKLSSYSLNSVSAHFLGEQKE 470
Query: 462 --LHSW--KLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
HS L E R L + + YL + RL+++L + EMAR+ G+
Sbjct: 471 DVHHSAIADLQAGNEETRRRLAVYCLKDAYLPQ-----RLLDKLMYTYNYIEMARVTGVP 525
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL----PLILEPESRLY 573
+L+RG +V S +LR + FV P+IK + + + + +L+P+ Y
Sbjct: 526 LSYLLTRGQSIKVFSQLLRKAAAKGFVI--PNIKVQGPVAGADGVGYEGATVLDPKIGFY 583
Query: 574 TDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 603
P+ LDF SLYPS+++A+N C++T L +
Sbjct: 584 DRPVATLDFASLYPSIMMAHNLCYTTLLTK 613
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y P+ LDF SLYPS+++A+N C++T L +
Sbjct: 582 FYDRPVATLDFASLYPSIMMAHNLCYTTLLTK 613
>gi|323482726|gb|AAQ10665.3| DNA polymerase [Gorilla gorilla lymphocryptovirus 1]
Length = 751
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G + I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRKRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L +R NF+ P+ R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAARKENFILPIPAASDRDGYQGAT----VIQPLSGFYNCPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 12/48 (25%)
Query: 102 PSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P++S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 555 PAASDRDGYQGATVIQPLSGFYNCPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323716911|gb|ADY05325.1| DNA polymerase [Lophocebus aterrimus lymphocryptovirus 1]
Length = 751
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + +R NT+++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDARKGFLRANTKVRXTGLIPIDMYAVCRDKMSLSDYKLDTVAKHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ F+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKEKFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|13541654|ref|NP_111342.1| DNA polymerase II [Thermoplasma volcanium GSS1]
Length = 798
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 55/357 (15%)
Query: 323 ENVRQWDPDILIGYEIETFSWGYLLERHFV-SNEKELFSIFIENVRQWDPDILIGYEIET 381
ENV + ++IGY I +G + ++ + +EKE+ FI+ +R DPD++ GY I+
Sbjct: 170 ENVEDYGKILVIGYSI---MFGDIQKKGEIHGDEKEILYRFIDLIRAEDPDVITGYNIDG 226
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEV 441
+ R G++LN L R V +R + + ++ GR++ + W ++ +
Sbjct: 227 YDMLVIQRRMEQYGIHLN--LGRDGSVPRR------IMDQFWRVHGRLISDTWWNVKKIL 278
Query: 442 NLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQ 500
+ + + + I +L E + W+ R V Y I+ + +R+ E+
Sbjct: 279 HPKHESLDYIAMKLLGEGKDSIDRLNIEAEWQKRQD-----EVISYCIKDADLTLRIFEK 333
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
L + R M+ + + +V + G+ V+SI++R + N + AH +
Sbjct: 334 LRVLERLMFMSTVTKLPLDDVANAGTSNYVDSILIRAADRENI-----GVPMNAHNLKED 388
Query: 561 SL--PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCI 618
+ + + LY++ +IVLDF+S+YPS+II YN CF+T P G I
Sbjct: 389 EIQGGYVHTIGAGLYSN-VIVLDFKSMYPSMIIKYNVCFTTLD------------PKGEI 435
Query: 619 DLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+SP+G+ F+ + G++P++LQE++ R VK+ MKE K
Sbjct: 436 -----------------VSPTGIRFLSPEKKKGLIPRILQELMADRDDVKKRMKEAK 475
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
LY++ +IVLDF+S+YPS+II YN CF+T
Sbjct: 402 LYSN-VIVLDFKSMYPSMIIKYNVCFTT 428
>gi|14325054|dbj|BAB59979.1| DNA polymerase [Thermoplasma volcanium GSS1]
Length = 800
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 166/357 (46%), Gaps = 55/357 (15%)
Query: 323 ENVRQWDPDILIGYEIETFSWGYLLERHFV-SNEKELFSIFIENVRQWDPDILIGYEIET 381
ENV + ++IGY I +G + ++ + +EKE+ FI+ +R DPD++ GY I+
Sbjct: 172 ENVEDYGKILVIGYSI---MFGDIQKKGEIHGDEKEILYRFIDLIRAEDPDVITGYNIDG 228
Query: 382 LSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEV 441
+ R G++LN L R V +R + + ++ GR++ + W ++ +
Sbjct: 229 YDMLVIQRRMEQYGIHLN--LGRDGSVPRR------IMDQFWRVHGRLISDTWWNVKKIL 280
Query: 442 NLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQ 500
+ + + + I +L E + W+ R V Y I+ + +R+ E+
Sbjct: 281 HPKHESLDYIAMKLLGEGKDSIDRLNIEAEWQKRQD-----EVISYCIKDADLTLRIFEK 335
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
L + R M+ + + +V + G+ V+SI++R + N + AH +
Sbjct: 336 LRVLERLMFMSTVTKLPLDDVANAGTSNYVDSILIRAADRENI-----GVPMNAHNLKED 390
Query: 561 SL--PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCI 618
+ + + LY++ +IVLDF+S+YPS+II YN CF+T P G I
Sbjct: 391 EIQGGYVHTIGAGLYSN-VIVLDFKSMYPSMIIKYNVCFTTLD------------PKGEI 437
Query: 619 DLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+SP+G+ F+ + G++P++LQE++ R VK+ MKE K
Sbjct: 438 -----------------VSPTGIRFLSPEKKKGLIPRILQELMADRDDVKKRMKEAK 477
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
LY++ +IVLDF+S+YPS+II YN CF+T
Sbjct: 404 LYSN-VIVLDFKSMYPSMIIKYNVCFTT 430
>gi|156144449|gb|ABU52895.1| DNA polymerase [Macaca fascicularis rhadinovirus 2]
Length = 749
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 36/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F +R ++ D L GY I YL+ R V L LN+ + I EV
Sbjct: 357 SEYDMLVSFFAMLRDFEVDFLTGYNISNFDLPYLITRASQVYNLRLNEYTKIKTGSIFEV 416
Query: 409 -EKRNSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
E R +++ +++++ G + I+++++ R +++L Y + + L + S+K
Sbjct: 417 HEPRGGGGGFMRSVSKIKIAGIVPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYK 476
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R + + ++ L+ + L++ SE+A+L IQ VL
Sbjct: 477 DIPPLFRSGSAGRAKVGSYCVMDSVLV-----MNLLKMFMIHVEISEIAKLAKIQARRVL 531
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + NF+ P+ + + + ++ P Y +P++V+DF
Sbjct: 532 TDGQQLRVFSCLLEAAARENFILPVPTPEGQGGYQGAT----VINPIPGFYDEPVLVVDF 587
Query: 583 QSLYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I A+N C+ST + GR DL++ + +S V
Sbjct: 588 ASLYPSIIQAHNLCYSTMIHGR---------------DLHLHPTLTPDDYETFVLSGGPV 632
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV K R +L ++L L+ R +++++
Sbjct: 633 HFVKKHKRESLLGRLLTVWLEKRRAIRRTL 662
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHL 145
Y +P++V+DF SLYPS+I A+N C+ST + GR HL
Sbjct: 577 FYDEPVLVVDFASLYPSIIQAHNLCYSTMIHGRDLHL 613
>gi|46519343|gb|AAS99991.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735200|gb|AEW87539.1| JM14 [Macaca fuscata rhadinovirus]
gi|365735371|gb|AEW87709.1| JM14 [Macaca fuscata rhadinovirus]
Length = 1012
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 152/330 (46%), Gaps = 36/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F +R ++ D L GY I YL+ R V L LN+ + I EV
Sbjct: 357 SEYDMLVSFFAMLRDFEVDFLTGYNISNFDLPYLITRASQVYNLRLNEYTKIKTGSIFEV 416
Query: 409 -EKRNSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
E R +++ +++++ G + I+++++ R +++L Y + + L + S+K
Sbjct: 417 HEPRGGGGGFMRSVSKIKIAGIVPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYK 476
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R + + ++ L+ + L++ SE+A+L IQ VL
Sbjct: 477 DIPPLFRSGPGGRAKVGSYCVMDSVLV-----MDLLKMFMIHVEISEIAKLAKIQARRVL 531
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + +NF+ P+ + + + ++ P Y +P++V+DF
Sbjct: 532 TDGQQLRVFSCLLEAAARDNFILPVPTPEGQGGYQGAT----VINPIPGFYDEPVLVVDF 587
Query: 583 QSLYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I A+N C+ST + GR DL++ + +S V
Sbjct: 588 ASLYPSIIQAHNLCYSTMIHGR---------------DLHLHPNLTPDDYETFVLSGGPV 632
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV K R +L ++L L+ R +++++
Sbjct: 633 HFVKKHKRESLLGRLLTVWLEKRRAIRRTL 662
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHL 145
Y +P++V+DF SLYPS+I A+N C+ST + GR HL
Sbjct: 577 FYDEPVLVVDFASLYPSIIQAHNLCYSTMIHGRDLHL 613
>gi|323716885|gb|ADY05317.1| DNA polymerase [Mandrillus sphinx lymphocryptovirus 1]
Length = 751
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R + +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLNVEIVTGYNVANFDWPYILDRARHIYGINPAALGKIRTGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRSNTKVRVTGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L + R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFVAGPKGRQKLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323716870|gb|ADY05312.1| DNA polymerase [Pan paniscus lymphocryptovirus 1]
Length = 751
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 30/262 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI-----TE 407
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N L +I E
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGIN-PASLGKIRSGGVCE 413
Query: 408 VEKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------H 457
V + + + NT++++ G + I+++ + R +++L Y + + H+L +
Sbjct: 414 VRRPHDAGKGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHY 473
Query: 458 ERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 474 KEIP----RLFAAGPEGRKRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIP 524
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
VL G Q RV S +L +R +F+ P+ R + +++P S Y P+
Sbjct: 525 CRRVLDDGQQIRVFSCLLAAARKEDFILPMPAASDRDGYQGAT----VIQPLSGFYNSPV 580
Query: 578 IVLDFQSLYPSVIIAYNYCFST 599
+V+DF SLYPS+I A+N C+ST
Sbjct: 581 LVVDFASLYPSIIQAHNLCYST 602
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P++S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPAASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323716899|gb|ADY05321.1| DNA polymerase [Pithecia pithecia lymphocryptovirus 1]
Length = 748
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 152/349 (43%), Gaps = 36/349 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E +L F + +R + +I+ GY + W Y+++R ++ G+N ++ + EV
Sbjct: 352 SEMDLIYAFFQLIRDLNVEIITGYNVANFDWPYIMDRARHIYGINPASLGKIKMGGVCEV 411
Query: 409 EKRNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ + + T++++ G I I+++ + R +++L Y + + +L + +K
Sbjct: 412 RRPHDAGKMFSRACTKVRISGIIPIDMYSVCRDKLSLSDYKLDTVAKRLLGTKKEDVHYK 471
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L E R L + + L+ + L+ SE+A++ I VL
Sbjct: 472 EIPHLFRAGPEGRRRLGMYCVQDSALV-----MDLLNHFVTHVEISEIAKIANIPCRRVL 526
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L ++ NF+ P R + +++P S Y P++V+DF
Sbjct: 527 DDGQQIRVFSCLLAAAQKENFILPMPQPSDRDGYQGAT----VIQPISGFYNSPVLVVDF 582
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C+ST + E + D P + ++ +S
Sbjct: 583 ASLYPSIIQAHNLCYSTLITPGEESRLRDLRP-------------GEDYESFALSGGTFH 629
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
FV K I L +L+ L R +K+ + E R T+L+ L
Sbjct: 630 FVKKHIHKSFLASLLESWLAKRKAIKRLLAA---CEDPRQRTILDKQQL 675
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 572 FYNSPVLVVDFASLYPSIIQAHNLCYST 599
>gi|18653816|ref|NP_570750.1| DNA polymerase [Macacine herpesvirus 5]
gi|7329997|gb|AAF59986.1|AF210726_7 polymerase [Rhesus monkey rhadinovirus H26-95]
gi|2625044|gb|AAC58687.1| DNA polymerase [rhesus monkey rhadinovirus H26-95]
gi|4494914|gb|AAD21336.1| DNA polymerase [Macaca mulatta rhadinovirus 17577]
Length = 1014
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 36/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F +R ++ D L GY I YL+ R V L LN+ + I EV
Sbjct: 359 SEYDMLVSFFAMIRDFEVDFLTGYNISNFDLPYLITRASQVYNLRLNEYTKIKTGSIFEV 418
Query: 409 -EKRNSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
E R +++ +++++ G + I+++++ R +++L Y + + L + S+K
Sbjct: 419 HEPRGGGGGFMRSVSKIKIAGIVPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYK 478
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R + + ++ L+ + L++ SE+A+L IQ VL
Sbjct: 479 DIPPLFRSGPGGRAKVGSYCVMDSVLV-----MDLLKMFMIHVEISEIAKLAKIQARRVL 533
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + NF+ P+ + + + ++ P Y +P++V+DF
Sbjct: 534 TDGQQLRVFSCLLEAAARENFILPVPTPEGQGGYQGAT----VINPIPGFYDEPVLVVDF 589
Query: 583 QSLYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I A+N C+ST + GR DL++ + +S V
Sbjct: 590 ASLYPSIIQAHNLCYSTMIHGR---------------DLHLHPNLTPDDYETFVLSGGPV 634
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV K R +L ++L L+ R +++++
Sbjct: 635 HFVKKHKRESLLGRLLTVWLEKRRAIRRTL 664
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHL 145
Y +P++V+DF SLYPS+I A+N C+ST + GR HL
Sbjct: 579 FYDEPVLVVDFASLYPSIIQAHNLCYSTMIHGRDLHL 615
>gi|8925896|gb|AAF81664.1|AF204167_1 DNA polymerase [Macaca nemestrina rhadinovirus 2]
Length = 862
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 152/330 (46%), Gaps = 36/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F +R ++ D L GY I YL+ R V L LN+ + I EV
Sbjct: 207 SEYDMLVSFFAMLRDFEVDFLTGYNISNFDLPYLIARASQVYNLQLNEYTKIKTGSIFEV 266
Query: 409 -EKRNSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
E R + +++ +++++ G + I+++++ R +++L Y + + L + S+K
Sbjct: 267 HEPRGAGGGFMRSVSKIKIAGIVPIDMYQVCREKLSLSDYKLDTVARQCLGGKKEDVSYK 326
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R + + ++ L+ + L++ SE+A+L IQ VL
Sbjct: 327 DIPPLFRSGSAGRAKVGSYCVMDSVLV-----MDLLKMFMIHVEISEIAKLAKIQARRVL 381
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + NF+ P+ + + + ++ P Y +P++V+DF
Sbjct: 382 TDGQQLRVFSCLLEAAARENFILPVPTPEGQGGYQGAT----VINPIPGFYDEPVLVVDF 437
Query: 583 QSLYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I A+N C+ST + GR DL++ + +S V
Sbjct: 438 ASLYPSIIQAHNLCYSTMIHGR---------------DLHLHPTLTPDDYETFVLSGGPV 482
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV K R +L ++L L+ R +++++
Sbjct: 483 HFVKKHKRESLLGRLLTVWLEKRRAIRRTL 512
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHL 145
Y +P++V+DF SLYPS+I A+N C+ST + GR HL
Sbjct: 427 FYDEPVLVVDFASLYPSIIQAHNLCYSTMIHGRDLHL 463
>gi|323456371|gb|EGB12238.1| hypothetical protein AURANDRAFT_16778, partial [Aureococcus
anophagefferens]
Length = 106
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 497 LIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHM 556
++ LD +GR +ARLFG+ + LSRGSQ RVE+++ + SP A+
Sbjct: 6 VVTALDVLGRNLAIARLFGMPLDDALSRGSQHRVEAVLFP----TWYALRSPDGPAVANQ 61
Query: 557 RAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 601
A E + L LEP S +YT+P+ LDFQSLYPS++IA+N CFSTC+
Sbjct: 62 PALEVVALNLEPVSAVYTEPVACLDFQSLYPSMVIAHNLCFSTCI 106
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
+YT+P+ LDFQSLYPS++IA+N CFSTC+
Sbjct: 77 VYTEPVACLDFQSLYPSMVIAHNLCFSTCI 106
>gi|156254718|gb|AAQ10669.2| DNA polymerase [Papio hamadryas lymphocryptovirus 2]
Length = 751
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFMRANTKVRITGLIPIDMYAVCREKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRKRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ F+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKEKFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|70568331|dbj|BAE06251.1| B-family DNA polymerase [Heterosigma akashiwo virus 01]
Length = 1144
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 158/356 (44%), Gaps = 46/356 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN---------LNQELSR 404
NE EL + + + DPDI+ GY I W Y+ R LG+ +++ SR
Sbjct: 262 NEGELIIRWFHYIAEIDPDIITGYNIFGFDWEYIKGRVDFLGIEDEILSVASRIDKLKSR 321
Query: 405 ITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL----HERI 460
E +S+ + + L+MPGRI + + ++ E L+SY +N+ YH H+
Sbjct: 322 FMTKELNSSAFGDNEFKFLEMPGRIEFDFFSYIKREHKLESYKLDNVAYHFTKQKKHDVK 381
Query: 461 PLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
P+ + L E + ++ + +LI I L+++L I EM+++ + F
Sbjct: 382 PMDIFIKLMGTPEDVREVAEYCVQDTFLI-----IELMKKLCVIPNLIEMSKVTRVPFEY 436
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE-----SLPLILEPESRLYTD 575
++ RG Q +V S + + N V + +K + E + +L S Y D
Sbjct: 437 LILRGQQIKVFSQIFYEAMKENIVIPTNILKLQGKKDRNEEHEKYTGATVLTANSGCYFD 496
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
+ LDF SLYPS++IAYN C++T L ++ R L + + T
Sbjct: 497 CVSGLDFASLYPSIMIAYNMCYTT--------------------LVLNERELPREAKIET 536
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
I + G+LPK+L+++ TR K+ M E +E+ T+LN L
Sbjct: 537 IEWENNRHRFVQNKEGLLPKILKKLWITRKSTKRLMNE---TENKEMKTILNGKQL 589
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y D + LDF SLYPS++IAYN C++T +
Sbjct: 494 YFDCVSGLDFASLYPSIMIAYNMCYTTLV 522
>gi|403333149|gb|EJY65649.1| DNA polymerase [Oxytricha trifallax]
Length = 1272
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 54/328 (16%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEV 408
S E +L + E VR DPDIL GY I Y++ R L L + SRI T+V
Sbjct: 559 SKESDLLHAWREFVRVLDPDILTGYNIVNFDLPYIIGRAEALKLADYPKFSRIKDTFTKV 618
Query: 409 EKRNSSRDEV---KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
+ + + + + + GRI ++ + + E L+SY+ ++ L E+
Sbjct: 619 KDSTFTSKTLGTRETKDINIDGRIQFDMLQYIIREFKLRSYSLNSVSAKFLGEQKEDVQH 678
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+++ + + + Y I+ + +RL+ +L+ + +E++RL+ R
Sbjct: 679 TIISELQNQNEFTRRRLAI--YCIKDAYLPLRLMWKLECLFHMTEISRLY---------R 727
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
SQ L + S Q +++EP Y DP+ +LDF S
Sbjct: 728 KSQ-----------ELGYLIPTDKSNIQDGKYEGA----VVIEPIRGFYQDPVAILDFAS 772
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+++A+N C+ST + P+ D++VS+ +P+G FV
Sbjct: 773 LYPSIMMAHNLCYSTLVP-----------PYKLKDIDVSMYER---------TPNGDYFV 812
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSMK 672
KS++ G+LP +L+E++ R VK ++
Sbjct: 813 KKSVKKGVLPIILEELIQARRRVKSELQ 840
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DP+ +LDF SLYPS+++A+N C+ST
Sbjct: 760 FYQDPVAILDFASLYPSIMMAHNLCYST 787
>gi|323482723|gb|AAQ10659.2| DNA polymerase [Colobus guereza lymphocryptovirus 1]
Length = 751
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRVTGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L + R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFVSGPKGRQKLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323716888|gb|ADY05318.1| DNA polymerase [Piliocolobus badius lymphocryptovirus 1]
Length = 751
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 30/262 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI-----TE 407
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N L +I E
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGIN-PASLGKIRVGGSCE 413
Query: 408 VEKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------H 457
V + + + NT++++ G I I+++ + R +++L Y + + H+L +
Sbjct: 414 VRRPHDTGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLAAQKEDVHY 473
Query: 458 ERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 474 KEIP----RLFAQGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIP 524
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
VL G Q RV S +L ++ NF+ PS R + +++P S Y P+
Sbjct: 525 CRRVLDDGQQIRVFSCLLAAAQKENFILPMPSPSDRDGYQGAT----VIQPLSGFYNSPV 580
Query: 578 IVLDFQSLYPSVIIAYNYCFST 599
+V+DF SLYPS+I A+N C+ST
Sbjct: 581 LVVDFASLYPSIIQAHNLCYST 602
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSPSDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323482737|gb|AAP41946.2| DNA polymerase [Erythrocebus patas lymphocryptovirus 1]
Length = 751
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMIYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L + R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFVAGPKGRQKLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ P+ R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPAASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P++S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPAASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|344257341|gb|EGW13445.1| DNA polymerase delta catalytic subunit [Cricetulus griseus]
Length = 1056
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 157/388 (40%), Gaps = 86/388 (22%)
Query: 293 GQESELPEVRTKPI----QMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLE 348
G++ PE P+ + E E F +R P ++G +++++
Sbjct: 317 GRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP--ILGAKVQSYE------ 368
Query: 349 RHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEV 408
E++L + + DPD++ GY I+ YL+ R L ++ L R+T +
Sbjct: 369 -----REEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGL 423
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
N++ +F++ ++ +WK
Sbjct: 424 RS-------------------------------NIRDSSFQSRQVGRRDSKVVSMNWKEQ 452
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQF 528
T R L + + +L +RL+E+L + EMAR+ G+ +LSRG Q
Sbjct: 453 T-----RRRLAVYCLKDAFLP-----LRLLERLMVLVNNVEMARVTGVPLGYLLSRGQQV 502
Query: 529 RVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPS 588
+V S +LR + + P +K + ++EP Y PI LDF SLYPS
Sbjct: 503 KVVSQLLRQAMRQGLLM--PVVKTEGGEDYTGAT--VIEPLKGYYDVPIATLDFSSLYPS 558
Query: 589 VIIAYNYCFSTCL--GRVEHLGVS-DSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
+++A+N C++T L G + LG+ D F +P+G FV
Sbjct: 559 IMMAHNLCYTTLLRPGAAQKLGLKPDEF---------------------IKTPTGDEFVK 597
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKE 673
S+R G+LP++L+ +L R K + +
Sbjct: 598 SSVRKGLLPQILENLLSARKRAKAELAQ 625
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVS-DSF 151
Y PI LDF SLYPS+++A+N C++T L G + LG+ D F
Sbjct: 543 YDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEF 586
>gi|123496446|ref|XP_001326973.1| polymerase zeta subunit [Trichomonas vaginalis G3]
gi|121909895|gb|EAY14750.1| polymerase zeta subunit, putative [Trichomonas vaginalis G3]
Length = 1045
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 49/334 (14%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
NEK+L F ++ DP+I+ GY I YL+ER + N EL R V++ ++
Sbjct: 310 NEKDLLINFQRFIQWVDPEIITGYNICGFDIPYLVERSIAIKANEFCELGRY--VKEFST 367
Query: 414 SRDEVKNTQ---------LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
++ K T+ + + GRI ++ ++++ L+SY+ + + ++
Sbjct: 368 CKETTKGTKQLGYRETKDVDINGRIQYDMMIAIKNDFKLRSYSLNAVSAQFIGDQKEDVH 427
Query: 465 WKLLTCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+ +++ R L + + YL ++L+ +L + T E++R+ +
Sbjct: 428 YSMISKLQNGSDTDRHRLAIYCVKDAYLP-----LQLMNKLLSVLTTIELSRVCHVPVNY 482
Query: 521 VLSRGSQFRVES-IMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIV 579
VL+RG Q RV S I+ + R N + S K + ++EP + YT PI
Sbjct: 483 VLNRGQQIRVFSQILYKSVRRNLIIPALTSQKSDDQYQGA----TVIEPSTGYYTTPIPT 538
Query: 580 LDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS 639
LDF SLYPS++I +N C+ST + + D NV SP+
Sbjct: 539 LDFNSLYPSIMIGHNICYSTLMTKP--------------DPNVQYEK----------SPN 574
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F G+LP++L+E+L R K+ M+E
Sbjct: 575 HCFFAKHDEFPGVLPEILKELLAARKATKKLMEE 608
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
YT PI LDF SLYPS++I +N C+ST + +
Sbjct: 532 YTTPIPTLDFNSLYPSIMIGHNICYSTLMTK 562
>gi|156144452|gb|ABU52897.1| DNA polymerase [Pan troglodytes rhadinovirus 2]
gi|157061821|gb|ABV03810.1| DNA polymerase [Pan troglodytes rhadinovirus 2]
Length = 753
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 46/337 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E ++F F +R +D DI+ GY I YL+ R + N +L T++ +
Sbjct: 361 SEYDMFLSFFSMLRDFDVDIITGYNISNFDIPYLITRATQV---YNLQLKDYTKI--KTG 415
Query: 414 SRDEVKN------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
S EV +++++ G I I+++++ R +++L Y + + +
Sbjct: 416 SMFEVHAPKVGGGGFMRSVSKIKISGIIAIDMYQVCREKLSLSDYKLNTVAQQCMGSKKE 475
Query: 462 LHSWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
S+K L R+ + ++ ++ L+ + L++ SE+A+L I
Sbjct: 476 DVSYKDIPPLYRSGATGRSRVGRYCVMDSVLV-----MDLLKMFMIHIEISEIAKLAKIP 530
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
VL+ G Q RV S +L + N++ VS + + A ++ P Y DP
Sbjct: 531 VRRVLTDGQQIRVLSCLLEAASQENYILPVSSTTAPGGYQGA-----TVINPMPGFYDDP 585
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
++V+DF SLYPS+I A+N C+ST + +H DL++ + + +
Sbjct: 586 VLVVDFASLYPSIIQAHNLCYSTLIH--DH------------DLHLYHTLTEHDYETFVL 631
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
S V FV K R +L K+L L R +++++ E
Sbjct: 632 SGGTVHFVKKHKRESLLAKLLTAWLSKRKQIRKTLAE 668
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y DP++V+DF SLYPS+I A+N C+ST
Sbjct: 581 FYDDPVLVVDFASLYPSIIQAHNLCYST 608
>gi|254167169|ref|ZP_04874022.1| DNA polymerase family B [Aciduliprofundum boonei T469]
gi|197624025|gb|EDY36587.1| DNA polymerase family B [Aciduliprofundum boonei T469]
Length = 779
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 150/331 (45%), Gaps = 47/331 (14%)
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
G + + +EK++ F+E + + DPDI+ GY I+ L ER G++
Sbjct: 185 GVIRKESIEGDEKDILWKFLEMIWKEDPDIITGYNIDGYDLELLSERYKKYGMDFL---- 240
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPL 462
+ + S + ++ GR++ + W ++ E+ L+ T + + H+ E ++ +
Sbjct: 241 ----IGRDKSKPQRIVGQFWRLHGRVIEDAWWAVKKELRLKQETLQAVAMHLFGEGKLDV 296
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+ W + + + ++ + L +R++ Q+ I + ++A + +V+
Sbjct: 297 DRTNIDEEWEKDKGKVIEYCKKDAELA-----LRILLQIGIINKYLDLATVTKFPLEDVI 351
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G+ V+S+++R + +N + V ++R + +EP LY + VLDF
Sbjct: 352 HSGTSTWVDSLLIREADRHN-IGVPLQGQERKSRKIEGGYVHTIEP--GLYH-WVCVLDF 407
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
+S+YPS+II YN CF+T + +SP+GV
Sbjct: 408 KSMYPSIIIKYNICFTTL-----------------------------SKDGDIVSPTGVR 438
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F+ K R G++PK+L E++ R +K+ MKE
Sbjct: 439 FLSKEKREGLIPKLLAELMKKRDELKRKMKE 469
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 115 IIVLDFQSLYPSVIIAYNYCFST 137
+ VLDF+S+YPS+II YN CF+T
Sbjct: 402 VCVLDFKSMYPSIIIKYNICFTT 424
>gi|294890775|ref|XP_002773308.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878360|gb|EER05124.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 609
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 17/256 (6%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQE-LSRITEV---- 408
+EK+L S F + + DPD++ GY I + YLL+R L ++ E L R+ V
Sbjct: 316 SEKDLLSSFQQYMVLVDPDVVTGYNIINFDFPYLLDRSAHLKVHPPFEYLGRLRGVASKV 375
Query: 409 -----EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
E R R E N + + GR+ ++ +++ E L+SY+ + L E+
Sbjct: 376 KDSVFESRALGRRE--NKDINIEGRVQFDMLIVMQREHKLRSYSLNAVSAEFLGEQKEDV 433
Query: 464 SWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ ++ + K + V + L +RL+ +L + +EMAR+ G+ +L+
Sbjct: 434 HYSIIGDLQKGTPETRKRLAV-YCLKDALLPLRLMNKLVCMYNYTEMARVTGVPINYLLT 492
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
RG +V S + R +R + +V + Q++ +L+P + Y +PI LDF
Sbjct: 493 RGQMIKVASQLFRKARSHGYVIPA----QKSSPGGEYEGATVLDPSTGFYQNPIATLDFA 548
Query: 584 SLYPSVIIAYNYCFST 599
SLYPS++ A+N C+ST
Sbjct: 549 SLYPSIMQAHNLCYST 564
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +PI LDF SLYPS++ A+N C+ST
Sbjct: 537 FYQNPIATLDFASLYPSIMQAHNLCYST 564
>gi|82503268|ref|YP_401712.1| BALF5 [Human herpesvirus 4]
gi|118858|sp|P03198.1|DPOL_EBV RecName: Full=DNA polymerase catalytic subunit
gi|1334913|emb|CAA24805.1| unnamed protein product [Human herpesvirus 4]
gi|23893658|emb|CAD53462.1| DNA polymerase [Human herpesvirus 4]
Length = 1015
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ +N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|428161174|gb|AFY97980.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ +N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|139424541|ref|YP_001129507.1| BALF5 [Human herpesvirus 4 type 2]
gi|123811624|sp|Q1HVC1.1|DPOL_EBVA8 RecName: Full=DNA polymerase catalytic subunit
gi|82704017|gb|ABB89286.1| BALF5 [Human herpesvirus 4]
gi|428161092|gb|AFY97899.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ +N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|123845614|sp|Q3KSP1.1|DPOL_EBVG RecName: Full=DNA polymerase catalytic subunit
gi|64173304|gb|AAY41154.1| unknown [Human herpesvirus 4]
Length = 1015
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ +N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|145533052|ref|XP_001452276.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419964|emb|CAK84879.1| unnamed protein product [Paramecium tetraurelia]
Length = 725
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 155/333 (46%), Gaps = 44/333 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLN---LNQELSRITEVEK 410
NE +L F + +DPD++ GY + +++R LGLN LN S+ E
Sbjct: 314 NEIDLLKQFNQFFLSFDPDVITGYNLHDELLPLIIQRSRTLGLNCQYLNYGRSKNEESLI 373
Query: 411 RN----SSRDEVKNTQ-LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
N S+ ++ T+ ++ GRI ++ + + + Y+ +I Y + + +I ++
Sbjct: 374 SNGRFFSTVMRMRETKFVETNGRIQLDTLICMLRDTKISQYSLGSIYYSLFNRQIEIYDQ 433
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVT-GIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+ + +E + Y +R + + ++ +I +E++++ G+ ++ R
Sbjct: 434 ETIFQLYEQNN----IKRISTYSLRKSEACLEILLYKGWIYTYAEISKVTGVPIDYIIQR 489
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESL----PLILEPESRLYTDPIIVL 580
G +V S +LR ++ N ++ + H+ P++ L+LEP+ Y P+ +
Sbjct: 490 GQSIKVLSQLLRQTKKNEYL-----VPDENHLVKPDTSNLKGALVLEPKKGFYKIPLALF 544
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPS- 639
DF SLYPS+IIAYN C++T + S+K + + I P
Sbjct: 545 DFVSLYPSIIIAYNMCYTTIIKDY---------------------SIKLNENDYHIIPEF 583
Query: 640 GVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G FV + I+ GILP++L+ +L R + KQ +
Sbjct: 584 GHKFVKQHIKKGILPQILENLLAKRAVTKQEFQ 616
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P+ + DF SLYPS+IIAYN C++T +
Sbjct: 536 FYKIPLALFDFVSLYPSIIIAYNMCYTTII 565
>gi|323716893|gb|ADY05319.1| DNA polymerase [Pongo pygmaeus lymphocryptovirus 1]
Length = 752
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 20/264 (7%)
Query: 347 LERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----E 401
+E + +E ++ F + +R +I+ GY + W Y+L+R ++ GLN
Sbjct: 349 VEVYEFPSELDMLYAFFQLIRDLGVEIVTGYNVANFDWPYILDRARHIYGLNPASLGKIR 408
Query: 402 LSRITEVEKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
+ + EV + + + T++++ G I I+++ + R +++L Y + + H+L R
Sbjct: 409 VGGVCEVRRPHDAGKGFLRSTTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVAKHLLGTR 468
Query: 460 IPLHSWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
+K L R L + + L+ + L+ +E+A++
Sbjct: 469 KEDVHYKEIPRLFAAGPAGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAH 523
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
I VL G Q RV S +L ++ NF+ P+ R + +++P S Y
Sbjct: 524 IPCRRVLDDGQQIRVFSCLLAAAQKENFILPMPAASDRDGYQGAT----VIQPLSGFYNC 579
Query: 576 PIIVLDFQSLYPSVIIAYNYCFST 599
P++V+DF SLYPS+I A+N C+ST
Sbjct: 580 PVLVVDFASLYPSIIQAHNLCYST 603
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P++S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 555 MPAASDRDGYQGATVIQPLSGFYNCPVLVVDFASLYPSIIQAHNLCYST 603
>gi|254167592|ref|ZP_04874443.1| DNA polymerase family B [Aciduliprofundum boonei T469]
gi|197623401|gb|EDY35965.1| DNA polymerase family B [Aciduliprofundum boonei T469]
Length = 779
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 150/331 (45%), Gaps = 47/331 (14%)
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
G + + +EK++ F+E + + DPDI+ GY I+ L ER G++
Sbjct: 185 GEIRKESIEGDEKDILWKFLEMIWKEDPDIITGYNIDGYDLELLSERYKKYGMDFL---- 240
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPL 462
+ + S + ++ GR++ + W ++ E+ L+ T + + H+ E ++ +
Sbjct: 241 ----IGRDKSKPQRIVGQFWRLHGRVIEDAWWAVKKELRLKQETLQAVAMHLFGEGKLDV 296
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+ W + + + ++ + L +R++ Q+ I + ++A + +V+
Sbjct: 297 DRTNIDEEWEKDKEKVIEYCKKDAELA-----LRILLQIGIINKYLDLATVTKFPLEDVI 351
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G+ V+S+++R + +N + V ++R + +EP LY + VLDF
Sbjct: 352 HSGTSTWVDSLLIREADRHN-IGVPLQGQERKSRKIEGGYVHTIEP--GLYH-WVCVLDF 407
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
+S+YPS+II YN CF+T + +SP+GV
Sbjct: 408 KSMYPSIIIKYNICFTTL-----------------------------SKDGDIVSPTGVR 438
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F+ K R G++PK+L E++ R +K+ MKE
Sbjct: 439 FLSKEKREGLIPKLLAELMKKRDELKRKMKE 469
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 115 IIVLDFQSLYPSVIIAYNYCFST 137
+ VLDF+S+YPS+II YN CF+T
Sbjct: 402 VCVLDFKSMYPSIIIKYNICFTT 424
>gi|27452775|gb|AAO12282.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 151/327 (46%), Gaps = 32/327 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL------SRITE 407
+E ++ F +R +D +I+ GY I + Y+LER + N+N + I +
Sbjct: 345 SELDMLYAFCTMIRDYDVEIITGYNIANFDFPYILERANTV-YNINPDAYTRTKSGAIFQ 403
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
V K NT++++ G +VI+++ + + +++L +Y + + E+ S+K
Sbjct: 404 VNKPKEGNFLRSNTKVKLSGLVVIDMYMVCKDKLSLSNYKLNTVAKECIGEKKEDMSYKE 463
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIG---RTSEMARLFGIQFYEVLSR 524
+ ++ + + + Y I+ + I +++ L F SE+A++ I V++
Sbjct: 464 IPALFKGNANDRARLGL--YCIQDS--ILVMDLLKFFMTHIEISEIAKIANIPMRRVITD 519
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q RV S +L ++ ++ P Q + + + +I P S Y P++V+DF S
Sbjct: 520 GQQIRVFSCLLASAKNRGYILPMP---QNGNFQGYQGATVI-APLSGFYNTPVLVVDFAS 575
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+I A+N C+ST + DL+ + + + IS V FV
Sbjct: 576 LYPSIIQAHNLCYSTLIHNE--------------DLHKYPQLKEDDYETFLISSGPVHFV 621
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
K I +L +L L R M+++ +
Sbjct: 622 KKHISESLLSNLLTTWLAKRKMIRKEL 648
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P++V+DF SLYPS+I A+N C+ST +
Sbjct: 563 FYNTPVLVVDFASLYPSIIQAHNLCYSTLI 592
>gi|6552720|gb|AAF16522.1|AF191043_1 DNA-dependent DNA polymerase [porcine lymphotropic herpesvirus 2]
gi|27452850|gb|AAO12354.1| DNA polymerase [Porcine lymphotropic herpesvirus 2]
Length = 1001
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 151/327 (46%), Gaps = 32/327 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL------SRITE 407
+E ++ F +R +D +I+ GY I + Y+LER + N+N + I +
Sbjct: 345 SELDMLYAFCTMIRDYDVEIITGYNIANFDFPYILERANTV-YNINPDAYTRTKSGAIFQ 403
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
V K NT++++ G +VI+++ + + +++L +Y + + E+ S+K
Sbjct: 404 VNKPKEGNFLRSNTKVKLSGLVVIDMYMVCKDKLSLSNYKLNTVAKECIGEKKEDMSYKE 463
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIG---RTSEMARLFGIQFYEVLSR 524
+ ++ + + + Y I+ + I +++ L F SE+A++ I V++
Sbjct: 464 IPALFKGNANDRARLGL--YCIQDS--ILVMDLLKFFMTHIEISEIAKIANIPMRRVITD 519
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q RV S +L ++ ++ P Q + + + +I P S Y P++V+DF S
Sbjct: 520 GQQIRVFSCLLASAKNRGYILPMP---QNGNFQGYQGATVI-APLSGFYNTPVLVVDFAS 575
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+I A+N C+ST + DL+ + + + IS V FV
Sbjct: 576 LYPSIIQAHNLCYSTLIHNE--------------DLHKYPQLKEDDYETFLISSGPVHFV 621
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
K I +L +L L R M+++ +
Sbjct: 622 KKHISESLLSNLLTTWLAKRKMIRKEL 648
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P++V+DF SLYPS+I A+N C+ST +
Sbjct: 563 FYNTPVLVVDFASLYPSIIQAHNLCYSTLI 592
>gi|451845686|gb|EMD58998.1| hypothetical protein COCSADRAFT_153806 [Cochliobolus sativus
ND90Pr]
Length = 1115
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V + F+ NV D ++ +I +F
Sbjct: 320 GRKGVFPEANVDPVIQIANVVTKYGDDKPFVRNVFCLDTVSPIVATQILSFQ-------- 371
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE- 409
+E E+ + + + + DPD++IGY + YLL+R L L SR+ V+
Sbjct: 372 ---DEGEMLMKWRDFLDEVDPDVIIGYNTSNFDFPYLLDRAKHLKLQRFPYWSRLKTVQS 428
Query: 410 ---------KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
K+ SRD + NT GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 429 KVEISNFSSKQMGSRDTKTTNTN----GRLQLDLLQLVQRDHQLRSYTLNSVCAHFLKEQ 484
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTV----EHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + ++ + + V + YL + RL+++L + +EMAR G
Sbjct: 485 KEDVHHSMITELFNGDSNSRRRLAVYCLKDAYLPQ-----RLLDKLMCLVNYTEMARATG 539
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q R S + R + + V P + + ++EP+ Y +
Sbjct: 540 VPFNYILSRGQQVRFISQLFRKALEHQLVI--PDLPNQGDTGDQYEGATVIEPKRGYYKE 597
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNL 634
P+ LDF SLYPS++ A+N C++T L R ++ LK K ++
Sbjct: 598 PVATLDFASLYPSIMQAHNLCYTTWLDR------------------QTVEKLKMKKDEDY 639
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++P+G F R G+L ++L+E+L R K+ +
Sbjct: 640 IVTPNGDMFCTAKTRKGLLTEILEELLSARKKAKKEL 676
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR--VEHL 145
Y +P+ LDF SLYPS++ A+N C++T L R VE L
Sbjct: 595 YKEPVATLDFASLYPSIMQAHNLCYTTWLDRQTVEKL 631
>gi|289596990|ref|YP_003483686.1| DNA-directed DNA polymerase [Aciduliprofundum boonei T469]
gi|289534777|gb|ADD09124.1| DNA-directed DNA polymerase [Aciduliprofundum boonei T469]
Length = 784
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 150/331 (45%), Gaps = 47/331 (14%)
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
G + + +EK++ F+E + + DPDI+ GY I+ L ER G++
Sbjct: 190 GEIRKESIEGDEKDILWKFLEMIWKEDPDIITGYNIDGYDLELLSERYKKYGMDFL---- 245
Query: 404 RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPL 462
+ + S + ++ GR++ + W ++ E+ L+ T + + H+ E ++ +
Sbjct: 246 ----IGRDKSKPQRIVGQFWRLHGRVIEDAWWAVKKELRLKQETLQAVAMHLFGEGKLDV 301
Query: 463 HSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+ W + + + ++ + L +R++ Q+ I + ++A + +V+
Sbjct: 302 DRTNIDEEWEKDKEKVIEYCKKDAELA-----LRILLQIGIINKYLDLATVTKFPLEDVI 356
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G+ V+S+++R + +N + V ++R + +EP LY + VLDF
Sbjct: 357 HSGTSTWVDSLLIREADRHN-IGVPLQGQERKSRKIEGGYVHTIEPG--LY-HWVCVLDF 412
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
+S+YPS+II YN CF+T + +SP+GV
Sbjct: 413 KSMYPSIIIKYNICFTTL-----------------------------SKDGDIVSPTGVR 443
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
F+ K R G++PK+L E++ R +K+ MKE
Sbjct: 444 FLSKEKREGLIPKLLAELMKKRDELKRKMKE 474
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 115 IIVLDFQSLYPSVIIAYNYCFST 137
+ VLDF+S+YPS+II YN CF+T
Sbjct: 407 VCVLDFKSMYPSIIIKYNICFTT 429
>gi|323716879|gb|ADY05315.1| DNA polymerase [Macaca fuscata lymphocryptovirus 1]
Length = 751
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R + +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLNVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPRGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323716882|gb|ADY05316.1| DNA polymerase [Pan troglodytes lymphocryptovirus 1]
Length = 752
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 30/262 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI-----TE 407
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N L +I E
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGIN-PASLGKIRSGGVCE 413
Query: 408 VEKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------H 457
V + + + NT++++ G + I+++ + R +++L Y + + H+L +
Sbjct: 414 VRRPHDAGKGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHY 473
Query: 458 ERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 474 KEIP----RLFAAGPAGRKRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIP 524
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
VL G Q RV S +L +R +F+ P+ R + +++P S Y P+
Sbjct: 525 CRRVLDDGQQIRVFSCLLAAARKEDFILPMPAASDRDGYQGAT----VIQPLSGFYNSPV 580
Query: 578 IVLDFQSLYPSVIIAYNYCFST 599
+V+DF SLYPS+I A+N C+ST
Sbjct: 581 LVVDFASLYPSIIQAHNLCYST 602
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
P++S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPAASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|336259478|ref|XP_003344540.1| hypothetical protein SMAC_07548 [Sordaria macrospora k-hell]
gi|380093254|emb|CCC08912.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1071
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 58/311 (18%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRD-EVKNTQLQ 424
+ Q DPDI+IGY I + K+ +RD + NT
Sbjct: 381 LEQVDPDIIIGYNIANFDF------------------------PKQMGNRDTKATNTN-- 414
Query: 425 MPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWE----HRTHLYK 480
GR+ +++ +L++ + L+SYT + + L E+ ++T +E R L
Sbjct: 415 --GRLQLDMLQLVQRDYQLRSYTLNAVCSNFLGEQKEDVHHSMITELFEGTPESRRRLAL 472
Query: 481 WMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRL 540
+ + YL + RL+++L + +EMAR+ G+ F +L+RG Q + S + R +
Sbjct: 473 YCLKDAYLPQ-----RLMDKLSCLENYTEMARVTGVPFNFLLARGQQVKFLSQLFRKALE 527
Query: 541 NNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTC 600
V P+++ + E +I EP Y PI LDF SLYPS++ A+N C++T
Sbjct: 528 QKLVI--PNLRPESSEEQYEGATVI-EPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTL 584
Query: 601 LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEI 660
+ + ++ +LKK ++ ++P+G FV R G+L ++L+E+
Sbjct: 585 IKK----------------RDIERWNLKK-DEDYIVTPNGDMFVTTKQRKGLLAQILEEL 627
Query: 661 LDTRLMVKQSM 671
L R K+ +
Sbjct: 628 LSARKQAKREL 638
>gi|386368289|gb|AFJ06900.1| BALF5 [Human herpesvirus 4]
Length = 1015
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI-----TEV 408
+E ++ F + +R +I+ GY + W Y+L+R + L +I EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYSIXPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L E R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAAGPEGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|153803864|gb|ABN49957.1| DNA polymerase [Bandicota indica rhadinovirus 4]
Length = 767
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 154/330 (46%), Gaps = 35/330 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E +L F+ +R ++ + + GY I Y+++R ++ ++ ++ ++ I EV
Sbjct: 376 SEYDLLICFLALLRDYNIEFITGYNISNFDLPYIIDRATHIYNIDCSRFTKMKIDSIFEV 435
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K S T++++ G + I+++ + + +++L Y + H L S+K
Sbjct: 436 RKPIDSGAGFMRSQTKIKISGIVPIDMYTVCKDKLSLSDYKLNTVAKHCLSTEKEDVSYK 495
Query: 467 LLTCWWEH----RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+ ++ R + + ++ L+ + L+ SE+ +L I VL
Sbjct: 496 EIPILFKSGPVGRAKVGSYCVMDSVLV-----LDLLHYFMAHIEISEIGKLAKIPIRRVL 550
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L +R N+++ PS R H + +I +P S Y+ P++V+DF
Sbjct: 551 TDGQQIRVFSCLLDAARHNHYIL--PSTNTRGHNEGYQGATVI-DPISGFYSTPVLVVDF 607
Query: 583 QSLYPSVIIAYNYCFSTCL-GRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
SLYPS+I A+N C+ST + + H+ FP N++ + + +S V
Sbjct: 608 ASLYPSIIQAHNLCYSTIIPNDMLHM-----FP------NLT----QHDYETFMLSSGPV 652
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV K +C IL +L + L R +K +
Sbjct: 653 HFVKKHKKCSILSTLLTKWLSKRKQLKHQL 682
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y+ P++V+DF SLYPS+I A+N C+ST
Sbjct: 597 FYSTPVLVVDFASLYPSIIQAHNLCYST 624
>gi|71033557|ref|XP_766420.1| DNA polymerase delta catalytic subunit [Theileria parva strain
Muguga]
gi|68353377|gb|EAN34137.1| DNA polymerase delta catalytic subunit, putative [Theileria parva]
Length = 1095
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 166/337 (49%), Gaps = 40/337 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLN-QELSRITEVE--- 409
NE++L + + V DPD L GY I YLL R VL + ++L+RI V
Sbjct: 358 NEEQLLLAWNDFVTFVDPDFLTGYNIILFDLPYLLTRSSVLNIEARFKKLTRIRSVNCNF 417
Query: 410 KRNSSRDEV----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHS 464
K + S + + +N ++ + GRI+ +++ L+R + L+SY+ + + L ++ +H
Sbjct: 418 KDSISNNNILGLYENKEINIEGRILFDVYDLVRRDYKLKSYSLNFVSFEFLKQQKEDVHY 477
Query: 465 WKLLTCWWEHRTHLYKWMT--VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+L + + + + ++ ++ + I +L+ ++I EM+R+ ++
Sbjct: 478 STILKLFNGNNNDRRRIASYCLKDSILPLLLINKLLLLYNYI----EMSRVTTTPIKLLI 533
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q RV + + + N+V ++ K ++ + E +LEP + +PI VL
Sbjct: 534 TRGQQIRVTMQIYKQCKKMNYVIPVIAGGGKSSSNENSYEG-ATVLEPLKGYHKNPISVL 592
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP-- 638
DFQSLYPS++IA+N C+ST L + +++ P +++ P
Sbjct: 593 DFQSLYPSIMIAHNICYSTLLN---YNTINNYKP-----------------EDIVTVPGY 632
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+ + F++ R GILP +++ +++ R K+ M E K
Sbjct: 633 NDICFINVKKRKGILPIIVENLINERKKAKKMMNECK 669
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 140
+ +PI VLDFQSLYPS++IA+N C+ST L
Sbjct: 585 HKNPISVLDFQSLYPSIMIAHNICYSTLLN 614
>gi|51518080|ref|YP_068007.1| BALF5 [Macacine herpesvirus 4]
gi|18025531|gb|AAK95475.1| BALF5 [Macacine herpesvirus 4]
Length = 1015
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPRGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|159115336|ref|XP_001707891.1| DNA polymerase delta, catalytic subunit [Giardia lamblia ATCC
50803]
gi|157435999|gb|EDO80217.1| DNA polymerase delta, catalytic subunit [Giardia lamblia ATCC
50803]
Length = 1329
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 169/380 (44%), Gaps = 45/380 (11%)
Query: 242 NYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEV 301
N + VL+ +I ++S PD A D + I LY IL ++ P
Sbjct: 269 NAPIRVLSFDIESVSLQGGFPDAASDYIITICSSLY------------ILTQSTADAPHA 316
Query: 302 RTK-------PIQMNFV---SNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHF 351
PI V E+EL F ++ +DPD+ GY I+ F + Y+ +R
Sbjct: 317 NVALVLKSCAPIVGADVFCFETEQELLLAFNYLIQLFDPDLFTGYNIDGFDFSYIFKRAE 376
Query: 352 VSNEKELFSIFIENV-RQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEK 410
VS + ++++ D L+ + S Y L + +S + K
Sbjct: 377 VSQ------VLVQSLPGSMGTDQLLSRMVRKGSSAYASTLPRALSSPMTIAVSHLQS--K 428
Query: 411 RNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ RD +++ PGRI +++ + H+ L+SYT ++ L+E+ + ++T
Sbjct: 429 QLGKRD---TYEIECPGRISMDILPNIIHDYKLRSYTLNSVCARFLNEQKDDVHYSMITP 485
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFR 529
+ + + +T+ Y I+ + ++L+E+L + T E+ R+ G+ +L G Q R
Sbjct: 486 LFMQDEYGRRRITL--YCIKDCKLPLKLMEKLMILVNTIELCRVSGLCGSLLLYSGQQIR 543
Query: 530 VESIMLRLSRLNNFVAV----SPSIKQRAHMRAPESL--PLILEPESRLYTD--PIIVLD 581
+ S++ R S +++ + ESL +L P+ Y+D PI LD
Sbjct: 544 ILSLLYRFSAAESYLIPYRIRTGGGYTGGFSGDSESLEGATVLNPKRGFYSDKQPIATLD 603
Query: 582 FQSLYPSVIIAYNYCFSTCL 601
F SLYP++IIA+N C+ST +
Sbjct: 604 FNSLYPTIIIAHNLCYSTMI 623
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 110 LYTD--PIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+D PI LDF SLYP++IIA+N C+ST +
Sbjct: 592 FYSDKQPIATLDFNSLYPTIIIAHNLCYSTMI 623
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+T++P F+ K++ GILPK+LQ +LD R KQ MK+
Sbjct: 713 ITVTPIKARFLKKTVFPGILPKILQVLLDARKRAKQDMKK 752
>gi|323716908|gb|ADY05324.1| DNA polymerase [Macaca fuscata lymphocryptovirus 2]
Length = 751
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPGGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|323716876|gb|ADY05314.1| DNA polymerase [Semnopithecus entellus lymphocryptovirus 1]
Length = 751
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R + +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLNVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRQGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ + + NT++++ G + I+++ + R +++L Y + + ++L R +K
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLVPIDMYAVCRDKLSLSDYKLDTVAQYLLGARKEDVHYK 474
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L E R L + + L+ + L+ +E+A++ I VL
Sbjct: 475 EIPRLFAQGPEGRRRLGIYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPCRRVL 529
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L ++ NF+ PS R + +++P S Y P++V+DF
Sbjct: 530 DDGQQIRVFSCLLAAAQKENFILPMPSPSDRDGYQGAT----VIQPLSGFYNSPVLVVDF 585
Query: 583 QSLYPSVIIAYNYCFST 599
SLYPS+I A+N C+ST
Sbjct: 586 ASLYPSIIQAHNLCYST 602
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSPSDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|265509546|gb|ACY75559.1| DNA polymerase [Macaca thibetana lymphocryptovirus 2]
Length = 750
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G++ + EV
Sbjct: 354 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGISPASLGKIRAGGVCEV 413
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 414 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 473
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 474 EIP----RLFAAGPAGRRKLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 524
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 525 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 580
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 581 VVDFASLYPSIIQAHNLCYST 601
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 553 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 601
>gi|77407328|ref|ZP_00784248.1| DNA polymerase delta large chain, fragment [Streptococcus
agalactiae H36B]
gi|77174063|gb|EAO77012.1| DNA polymerase delta large chain, fragment [Streptococcus
agalactiae H36B]
Length = 256
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 31/250 (12%)
Query: 427 GRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWW----EHRTHLYKWM 482
GRI ++ +L++ + L++YT ++ H L E+ ++T + + R L +
Sbjct: 23 GRIQLDXLQLIQRDHQLRNYTLNSVCSHFLGEQKEDVHHTMITELYNGTXDSRRRLAVYC 82
Query: 483 TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNN 542
+ YL + RL+++L + +EMAR+ G+ F +LSRG Q + S + R + +
Sbjct: 83 LKDAYLPQ-----RLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQD 137
Query: 543 FVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLG 602
V P++K + +I EP Y PI LDF SLYPS+I A+N C++T L
Sbjct: 138 LVI--PNLKNENGEEQYKGATVI-EPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLN 194
Query: 603 RVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNLTISPSGVAFVDKSIRCGILPKMLQEIL 661
+ S+ LK K ++ ++P+G F +R G+L ++LQE+L
Sbjct: 195 K------------------TSVEKLKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQELL 236
Query: 662 DTRLMVKQSM 671
R K+ +
Sbjct: 237 SARKRAKKEL 246
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+I A+N C++T L +
Sbjct: 165 YDVPIATLDFASLYPSIIQAHNLCYTTLLNKT 196
>gi|227452673|dbj|BAH57334.1| DNA polymerase [Hipposideros diadema herpesvirus]
Length = 747
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 167/355 (47%), Gaps = 32/355 (9%)
Query: 329 DPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLL 388
DP+ I + + T +E +E ++ F +R + +I+ GY I + YL+
Sbjct: 251 DPNKQILFTVGTCDGIEGVEVFEFPSELDMLYAFFYFIRDSNIEIVTGYNIANFDFPYLI 310
Query: 389 ERG---YVLGLNLNQELSR--ITEVEK-RNSSRDEVKNT-QLQMPGRIVINLWRLLRHEV 441
ER Y L +N +SR + V K R + ++ T ++++ G + I+++ + R ++
Sbjct: 311 ERAAVVYNLDVNSFSRMSRGGLFAVHKPRGEAGSFLRATSKIKISGVVAIDMYMVCRDKL 370
Query: 442 NLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIR-LIEQ 500
+L Y + L + S+K + + R+ T+ Y ++ ++ L++
Sbjct: 371 SLSDYKLNTVAAACLGAQKDDVSYKDIPTLF--RSGPRGRATLGKYCVKDAALVMDLLKH 428
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
+E+A+L I VL+ G Q R+ +L +++ +N++ + + A +
Sbjct: 429 FMIHVEITEIAKLARIPTRRVLTDGQQIRIFVCLLGVAKDHNYILPTNNGSPDAGYQGAT 488
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVEHLGVSDSFPFGCI 618
++ P S YT P++VLDF S+YPS+I A+N C+ST + G++E +P
Sbjct: 489 ----VINPLSGFYTKPVLVLDFASMYPSIIQAHNLCYSTLIPPGQLER------YP---- 534
Query: 619 DLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
N+ + Q +S V FV + +R +L +LQ L R ++++M +
Sbjct: 535 --NLKPDDYESFQ----VSAGTVHFVKRHVRTSLLSILLQNWLAKRKEIRRNMAQ 583
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL--GRVE 143
YT P++VLDF S+YPS+I A+N C+ST + G++E
Sbjct: 496 FYTKPVLVLDFASMYPSIIQAHNLCYSTLIPPGQLE 531
>gi|323471676|gb|AAW55917.2| DNA polymerase [Cercopithecus neglectus lymphocryptovirus 1]
Length = 751
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYSVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPGGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|265509549|gb|ACY75561.1| DNA polymerase [Pongo pygmaeus lymphocryptovirus 2]
Length = 751
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPGGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|343963274|gb|AEM72562.1| U38, partial [Elephant endotheliotropic herpesvirus 6]
Length = 781
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 383 ASEYELIEAFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIPCGTFTKMKRGRMTCF 442
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ M G ++I+++R+ +V+ ++ + I+ +L E+ S+K +
Sbjct: 443 KGMESFFNRCQ-CKVTMSGIVIIDMYRVCMDKVSAPNHKLDTIVDMLLGEKKHSVSYKQI 501
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ + R V Y + + ++ +L ++ F S +ARL I +V+ G Q
Sbjct: 502 SVLF--RKDDAGRGVVGAYCVHDSVLVHKLFCKMLFHYEASAIARLSNISMNKVVFDGQQ 559
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 560 SRIFACMLAAARKEDLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 615
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T V+D ++ SL++ + + +G FV
Sbjct: 616 SIIQAYNLCYCTL--------VTDD----------NLTSLREDDVTVVTTNTGRVHKFVK 657
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
IR IL ++L L R V++ +K K
Sbjct: 658 PHIRKSILSQLLTSWLAERKAVREKLKHCK 687
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 600 FYNTPVAVFDFASLYPSIIQAYNLCYCT 627
>gi|323716902|gb|ADY05322.1| DNA polymerase [Callithrix penicillata lymphocryptovirus 1]
Length = 748
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 43/332 (12%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI-----TE 407
+E +L F + +R + +I+ GY + W Y+L+R ++ G+N L +I E
Sbjct: 352 SEMDLIYAFFQLIRDLNVEIITGYNVANFDWPYILDRARHIYGIN-PASLGKIRGGGVCE 410
Query: 408 VEKRNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------H 457
V + N + T++++ G I I+++ + + +++L Y + + +L +
Sbjct: 411 VRRPNDAGKMFSRACTKIRISGVIPIDMYSVCKEKLSLSDYKLDTVAKRLLGTKKEDVHY 470
Query: 458 ERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
+ IP +L E R L + + L+ + L+ SE+A++ I
Sbjct: 471 KEIP----RLFRAGPEERKRLGMYCVQDSVLV-----MDLLNHFVTHVEISEIAKIANIP 521
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
VL G Q RV S +L ++ F+ P R + +++P + Y P+
Sbjct: 522 CRRVLDDGQQIRVFSCLLAAAQKEGFILPMPEPSDRDGYQGAT----VIQPIAGFYNSPV 577
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
+V+DF SLYPS+I A+N C+ST + E + D P + ++ ++S
Sbjct: 578 LVVDFASLYPSIIQAHNLCYSTIVTPGEEGKLRDLRP-------------GEDYESFSLS 624
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQ 669
FV K I L +L+ L R +++
Sbjct: 625 GGTFHFVKKHIHKSFLASLLESWLAKRKAIRK 656
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 152
Y P++V+DF SLYPS+I A+N C+ST + E + D P
Sbjct: 572 FYNSPVLVVDFASLYPSIIQAHNLCYSTIVTPGEEGKLRDLRP 614
>gi|323716873|gb|ADY05313.1| DNA polymerase [Macaca fascicularis lymphocryptovirus 1]
Length = 751
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPGGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ NF+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKENFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|24943095|ref|NP_733857.1| ORF5 [callitrichine herpesvirus 3]
gi|13676646|gb|AAK38212.1|AF319782_6 ORF5 [callitrichine herpesvirus 3]
Length = 1016
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 35/328 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI-----TE 407
+E +L F + +R + +I+ GY + W Y+L+R ++ G+N L +I E
Sbjct: 352 SEMDLIYAFFQLIRDLNVEIITGYNVANFDWPYILDRARHIYGIN-PASLGKIRGGGVCE 410
Query: 408 VEKRNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
V + N + T++++ G I I+++ + + +++L Y + + +L + +
Sbjct: 411 VRRPNDAGKMFSRACTKIRISGVIPIDMYSVCKEKLSLSDYKLDTVAKRILGTKKEDVHY 470
Query: 466 K----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
K L E R L + + L+ + L+ SE+A++ I V
Sbjct: 471 KEIPHLFRAGPEERKRLGMYCIQDSVLV-----MDLLNHFVTHVEISEIAKIANIPCRRV 525
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L G Q RV S +L ++ F+ P R + +++P + Y P++V+D
Sbjct: 526 LDDGQQIRVFSCLLAAAQKEGFILPMPEPSDRDGYQGAT----VIQPIAGFYNSPVLVVD 581
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+I A+N C+ST + E + D P + ++ ++S
Sbjct: 582 FASLYPSIIQAHNLCYSTIVTPGEEGKLRDLRP-------------GEDYESFSLSGGTF 628
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQ 669
FV K I L +L+ L R +++
Sbjct: 629 HFVKKHIHKSFLASLLESWLAKRKAIRK 656
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 152
Y P++V+DF SLYPS+I A+N C+ST + E + D P
Sbjct: 572 FYNSPVLVVDFASLYPSIIQAHNLCYSTIVTPGEEGKLRDLRP 614
>gi|30348512|emb|CAC84304.1| polmerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 159/358 (44%), Gaps = 55/358 (15%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---- 409
+E ++ F +R ++ +I+ GY I YL++R + N +LS + V+
Sbjct: 345 SEIDMLHGFFSLIRDFNVEIITGYNISNFDLPYLIDRATQI---YNIKLSDYSRVKTGSI 401
Query: 410 -KRNSSRDEVKN-----TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ ++ +D K +++++ G I I+++ + + +++L +Y + + H + +
Sbjct: 402 FQVHTPKDTGKGFMRSVSKIKISGIIAIDMYIVCKDKLSLSNYKLDTVANHCISAKKEDV 461
Query: 464 SWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
S+K L E R + + ++ L+ ++L++ SE+A+L I
Sbjct: 462 SYKDIMPLFMSGPEGRAKIGLYCVIDSVLV-----MKLLKFFMIHVEISEIAKLAKIPTR 516
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL+ G Q RV S +L +R N++ VS + A ++ P Y + ++
Sbjct: 517 RVLTDGQQIRVFSCLLAAARAENYILPVSNDVNADGFQGAT-----VINPIPGFYNNAVL 571
Query: 579 VLDFQSLYPSVIIAYNYCFST-----CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
V+DF SLYPS+I A+N C+ST L HL SD +
Sbjct: 572 VVDFASLYPSIIQAHNLCYSTLIPHHALHNYPHLKSSD-------------------YET 612
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
+S + FV K I+ +L ++L L R ++Q + E E L T+L+ L
Sbjct: 613 FMLSSGPIHFVKKHIQTSLLSRLLTVWLSKRKAIRQKLAE---CEDLDTKTILDKQQL 667
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST-----CLGRVEHLGVSD 149
Y + ++V+DF SLYPS+I A+N C+ST L HL SD
Sbjct: 565 FYNNAVLVVDFASLYPSIIQAHNLCYSTLIPHHALHNYPHLKSSD 609
>gi|323482729|gb|AAM89278.2| DNA polymerase [Gorilla gorilla lymphocryptovirus 2]
Length = 749
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 20/257 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ GLN + + EV
Sbjct: 354 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGLNPASLGKIRMGGVCEV 413
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ + + T++++ G + I+++ + R +++L Y + + H+L R +K
Sbjct: 414 RRPHDAGKGFLRATTKVRVTGVVPIDMYAVCRDKLSLSDYKLDTVARHLLGARKEDVHYK 473
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L + R L + + L+ + L+ +E+A++ I VL
Sbjct: 474 EIPWLFAKGPDGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPCRRVL 528
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L ++ +F+ P+ R + +++P S Y P++V+DF
Sbjct: 529 DDGQQIRVFSCLLAAAQKEDFILPMPAAADRDGYQGAT----VIQPLSGFYNSPVLVVDF 584
Query: 583 QSLYPSVIIAYNYCFST 599
SLYPS+I A+N C+ST
Sbjct: 585 ASLYPSIIQAHNLCYST 601
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 574 FYNSPVLVVDFASLYPSIIQAHNLCYST 601
>gi|6552717|gb|AAF16520.1|AF191042_1 DNA polymerase [porcine lymphotropic herpesvirus 1]
Length = 1004
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 153/327 (46%), Gaps = 32/327 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL------SRITE 407
+E ++ F +R +D +I+ GY I + Y+L+R ++ N+N + I +
Sbjct: 345 SELDMLYAFCTMIRDYDVEIITGYNISNFDFPYILDRANMV-YNINPDAYTRTKSGAIFQ 403
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
V K NT++++ G +VI+++ + + +++L +Y + + E+ S+K
Sbjct: 404 VHKPKEGNFLRSNTKVKLSGLVVIDMYMVCKDKLSLSNYKLNTVAKECIGEKKEDMSYKE 463
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIG---RTSEMARLFGIQFYEVLSR 524
+ ++ + + + Y I+ + + +++ L F SE+A++ I V++
Sbjct: 464 IPALFKGNANDRARLGL--YCIQDS--VLVMDLLKFFMTHIEISEIAKIANIPMRRVITD 519
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q RV S +L ++ ++ P Q + + + +I P S Y P++V+DF S
Sbjct: 520 GQQIRVFSCLLASAKNRGYILPMP---QNGNFQGYQGATVI-TPLSGFYNTPVLVVDFAS 575
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFV 644
LYPS+I A+N C+ST + DL+ + ++ + IS V FV
Sbjct: 576 LYPSIIQAHNLCYSTLIHHE--------------DLHKYPQLKEEDYETFLISSGPVHFV 621
Query: 645 DKSIRCGILPKMLQEILDTRLMVKQSM 671
K I +L +L L R M+++ +
Sbjct: 622 KKHISESLLSNLLTTWLAKRKMIRKEL 648
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P++V+DF SLYPS+I A+N C+ST +
Sbjct: 563 FYNTPVLVVDFASLYPSIIQAHNLCYSTLI 592
>gi|242398902|ref|YP_002994326.1| DNA polymerase [Thermococcus sibiricus MM 739]
gi|242265295|gb|ACS89977.1| DNA polymerase [Thermococcus sibiricus MM 739]
Length = 1469
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 49/329 (14%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR-----IT 406
VSNE+E+ FI+ +++ DPD++I Y + YL++R LGL L LSR +
Sbjct: 184 VSNEREMIKRFIQIIKEKDPDVIITYNGDNFDLPYLIKRAEKLGLRLI--LSRDNENPVP 241
Query: 407 EVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
++++ +S +++ GRI +L+ +++ VNL +YT E + VL + +
Sbjct: 242 KIQRMGNS------FAVEIKGRIHFDLFPVVKRAVNLPTYTLEAVYETVLGKHKSKLGAE 295
Query: 467 LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ WE L K + T + +F E+A+L G ++V +
Sbjct: 296 EIAAIWETEEGLKKLAQYSMEDAKATYEL----GREFFPMEVELAKLIGQSVWDVSRSST 351
Query: 527 QFRVESIMLRLSRLNNFVAVS-PSIKQ-RAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
VE MLR++ N +A + PS ++ + +R + EPE L+ + II LDF+S
Sbjct: 352 GNLVEWYMLRVAYERNELAPNRPSDEEYKRRLRTTYLGGYVKEPERGLWEN-IIYLDFRS 410
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP-SGVAF 643
LYPS+I+ +N T + GC QN ++P G F
Sbjct: 411 LYPSIIVTHNVSPDTLERK------------GC--------------QNYDVAPIVGYKF 444
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSMK 672
G +P +L+++++TR +K+ MK
Sbjct: 445 CKDF--SGFIPSILEDLIETRQKIKKEMK 471
>gi|451998244|gb|EMD90709.1| hypothetical protein COCHEDRAFT_1179801 [Cochliobolus
heterostrophus C5]
Length = 1115
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 293 GQESELPEVRTKP-IQMNFVSNEKELFSTFIENVRQWDP-DILIGYEIETFSWGYLLERH 350
G++ PE P IQ+ V + F+ NV D ++ +I +F
Sbjct: 320 GRKGVFPEANVDPVIQIANVVTKYGDDKPFVRNVFCLDTVSPIVATQILSFQ-------- 371
Query: 351 FVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE- 409
+E ++ + + + + DPD++IGY + YLL+R L L SR+ V+
Sbjct: 372 ---DEGDMLMKWRDFLDEVDPDVIIGYNTSNFDFPYLLDRAKHLKLQKFPYWSRLKTVQS 428
Query: 410 ---------KRNSSRD-EVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
K+ SRD + NT GR+ ++L +L++ + L+SYT ++ H L E+
Sbjct: 429 KVETSNFSSKQMGSRDTKTTNTN----GRLQLDLLQLVQRDHQLRSYTLNSVCAHFLKEQ 484
Query: 460 IPLHSWKLLTCWWEHRTHLYKWMTV----EHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
++T + ++ + + V + YL + RL+++L + +EMAR G
Sbjct: 485 KEDVHHSMITELFNGDSNSRRRLAVYCLKDAYLPQ-----RLLDKLMCLVNYTEMARATG 539
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
+ F +LSRG Q R S + R + + V P + + ++EP+ Y +
Sbjct: 540 VPFNYILSRGQQVRFISQLFRKALEHQLVI--PDLPNQGDNGDQYEGATVIEPKRGYYKE 597
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK-KLQQNL 634
P+ LDF SLYPS++ A+N C++T L R ++ LK K ++
Sbjct: 598 PVATLDFASLYPSIMQAHNLCYTTWLDR------------------QTVEKLKMKKDEDY 639
Query: 635 TISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++P+G F R G+L ++L+E+L R K+ +
Sbjct: 640 IVTPNGDMFCTAKTRKGLLTEILEELLSARKKAKKEL 676
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGR 141
Y +P+ LDF SLYPS++ A+N C++T L R
Sbjct: 595 YKEPVATLDFASLYPSIMQAHNLCYTTWLDR 625
>gi|253745698|gb|EET01445.1| DNA polymerase delta, catalytic subunit [Giardia intestinalis ATCC
50581]
Length = 1299
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 161/374 (43%), Gaps = 33/374 (8%)
Query: 242 NYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYT-CPPEEDRKVGIILIGQESELPE 300
N + VL+ +I ++S PD A D + I LY D I + S P
Sbjct: 240 NAPIRVLSFDIESVSLQGGFPDAASDYIITICSSLYILTQSTADTPHANIALVLHSCAPI 299
Query: 301 VRTKPIQMNFVSNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFS 360
V + E+EL F ++ +DPDI GY I+ F + Y+ +R VS
Sbjct: 300 VGADVFCFD---TERELLLAFNYLIQLFDPDIFTGYNIDGFDFNYIFKRAEVS------- 349
Query: 361 IFIENVRQWDPDILIGYEIETLSWGYLLERG---YVLGLNLNQELSRITEVEKRNSSRDE 417
Q L G+ G +L +G Y L + S V S +
Sbjct: 350 -------QVSTHSLPGFMGTDQLLGLMLTKGSSSYASTLTRSLSSSMTITVSHLQSKQVG 402
Query: 418 VKNT-QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRT 476
++T ++ PGR+ +++ + H L+SYT ++ L+E+ + ++T +
Sbjct: 403 KRDTYEINCPGRMSMDILPNIIHNYKLRSYTLNSVCARFLNEQKDDVHYSMITPLFMQNE 462
Query: 477 HLYKWMTVEHYLIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIML 535
Y + Y I+ + ++L+E+L + T E+ R+ G+ +L G Q R+ S++
Sbjct: 463 --YGRRRITSYCIKDCKLPLKLMEKLMILVNTIELCRVSGLCGCLLLYSGQQIRILSLLY 520
Query: 536 RLSRLNNFVAVSPSIKQRAHMRA----PESL--PLILEPESRLYTD--PIIVLDFQSLYP 587
R S +++ H E L +L P+ Y+D PI LDF SLYP
Sbjct: 521 RFSAAESYLIPYRMRTGGGHSAGFSGDSEGLEGATVLNPKRGFYSDKQPIATLDFNSLYP 580
Query: 588 SVIIAYNYCFSTCL 601
++IIA+N C+ST +
Sbjct: 581 TIIIAHNLCYSTMI 594
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 110 LYTD--PIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+D PI LDF SLYP++IIA+N C+ST +
Sbjct: 563 FYSDKQPIATLDFNSLYPTIIIAHNLCYSTMI 594
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+T++P F+ K++ GILPK+LQ +LD R KQ MK+
Sbjct: 684 ITVTPIKARFLKKTVFPGILPKILQVLLDARKKAKQDMKK 723
>gi|343963263|gb|AEM72555.1| U38 [Elephant endotheliotropic herpesvirus 6]
Length = 832
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 383 ASEYELIEAFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIPCGTFTKMKRGRMTCF 442
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ M G ++I+++R+ +V+ ++ + I+ +L E+ S+K +
Sbjct: 443 KGMESFFNRCQ-CKVTMSGIVIIDMYRVCMDKVSAPNHKLDTIVDMLLGEKKHSVSYKQI 501
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L ++ F S +ARL I +V+ G Q
Sbjct: 502 PVLF--RKDDAGRGVVGAYCVHDSVLVHKLFCKMLFHYEASAIARLSNISMNKVVFDGQQ 559
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 560 SRIFACMLAAARKEDLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 615
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T V+D ++ SL++ + + +G FV
Sbjct: 616 SIIQAYNLCYCTL--------VTDD----------NLTSLREDDVTVVTTNTGRVHKFVK 657
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
IR IL ++L L R V++ +K K
Sbjct: 658 PHIRKSILSQLLTSWLAERKAVREKLKHCK 687
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 597 KTGFYNTPVAVFDFASLYPSIIQAYNLCYCT 627
>gi|189237491|ref|XP_971399.2| PREDICTED: similar to Uncharacterized protein KIAA0226 [Tribolium
castaneum]
Length = 884
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 1 LCLARGFICELCNSEEVIFPWQLSSVHRCNQCGACFHTKC--HSQLPCKRCIRMRIRRDS 58
LC+ARGFICE+CN+ EVIFPWQ+ V RCNQCG C+H C S PC +C+R+ RR+
Sbjct: 819 LCVARGFICEICNAPEVIFPWQMRKVSRCNQCGTCYHISCWNPSDKPCNKCLRISKRREM 878
Query: 59 MKGIV 63
++ I
Sbjct: 879 VENIA 883
>gi|15723248|gb|AAL06317.1| DNA polymerase [Pan rhadino-herpesvirus 2]
Length = 389
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 44/331 (13%)
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV 418
F F +R +D DI+ GY I YL+ R + N +L T++ + S EV
Sbjct: 1 FLSFFSMLRDFDVDIITGYNISNFDIPYLITRATQV---YNLQLKDYTKI--KTGSMFEV 55
Query: 419 KN------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+++++ G I I+++++ R +++L Y + + + S+K
Sbjct: 56 HAPKVGGGGFMRSVSKIKISGIIAIDMYQVCREKLSLSDYKLNTVAQQCMGSKKEDVSYK 115
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R+ + ++ ++ L+ + L++ SE+A+L I VL
Sbjct: 116 DIPPLYRSGATGRSRVGRYCVMDSVLV-----MDLLKMFMIHIEISEIAKLAKIPVRRVL 170
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + N++ PS + ++ P Y DP++V+DF
Sbjct: 171 TDGQQIRVLSCLLEAAAQENYILPVPSTTAPGGYQGAT----VINPMPGFYDDPVLVVDF 226
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C+ST + +H DL++ + + +S V
Sbjct: 227 ASLYPSIIQAHNLCYSTLIH--DH------------DLHLYHTLTEHDYETFVLSGGKVH 272
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV K R +L K+L L R +++++ E
Sbjct: 273 FVKKHKRESLLAKLLTAWLSKRKQIRKTLAE 303
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DP++V+DF SLYPS+I A+N C+ST +
Sbjct: 216 FYDDPVLVVDFASLYPSIIQAHNLCYSTLI 245
>gi|52696275|pdb|1WNS|A Chain A, Crystal Structure Of Family B Dna Polymerase From
Hyperthermophilic Archaeon Pyrococcus Kodakaraensis Kod1
Length = 774
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS E+E+ F+ V++ DPD+LI Y + + YL +R LG+N L R K
Sbjct: 184 VSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFA--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +T
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE +L + V Y + + + + +F+ ++++RL G ++V + VE
Sbjct: 299 WETGENLER---VARYSMEDAKVTYELGK-EFLPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P K+ A R + EPE L+ + I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWEN-IVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ + + ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDVAPQVGHRFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKKKMK 468
>gi|336476181|ref|YP_004615322.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
gi|335929562|gb|AEH60103.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
Length = 905
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 167/360 (46%), Gaps = 46/360 (12%)
Query: 332 ILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
+L+G ++ G + +E L + F E R++DPD++ GY I Y+++R
Sbjct: 213 VLLGRSLDDAGDGV----EVLGDEPALLNRFFEIFREYDPDVVTGYNINDFDIPYIVDRI 268
Query: 392 YVL---GLNLNQELSRITEVEKRNSSRDEVK-NTQLQMPGRIVINLWRLLRHEVNLQSYT 447
L G+ +N R + R ++ + + + GRIV + ++R + +L+ Y
Sbjct: 269 KTLQSSGITINSACGR----DGRPLDYRKIGIRSMVSITGRIVADSLPIIRQQFSLKRYN 324
Query: 448 FENIMYHVLH-ERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI-IRLIEQLDFIG 505
+ + +L E++ + ++ W + + K++ Y R + + + L+ +L +
Sbjct: 325 LQTVSRELLDMEKLDVSPQQMEEYWLDSGEKIRKFI---DYARRDSELAMELLLKLRLLD 381
Query: 506 RTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL- 564
+ +A++ G E+L G VE+++LR R +++V + R ES L
Sbjct: 382 KFVALAQISGSLPQEILEGGQTSMVENLLLREFRKHDYVLPPRPDENIVSSRNRESEGLK 441
Query: 565 ---ILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLN 621
+LEP+ L + +++LD++SLYP++++A+N C++T +
Sbjct: 442 GGEVLEPKKGLL-EKVVILDYKSLYPTIMMAHNLCYTTVI-------------------- 480
Query: 622 VSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLR 681
+++ N+ PSG FV + GI+P +L+ +L+ R K MK K + R
Sbjct: 481 ----DIERPDGNIIKPPSGGEFVSAEVFRGIVPSILENLLNRRTETKGLMKGAKTEDEYR 536
>gi|73535447|pdb|1WN7|A Chain A, Crystal Structure Of Archaeal Family B Dna Polymerase
Mutant
Length = 774
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS E+E+ F+ V++ DPD+LI Y + + YL +R LG+N L R K
Sbjct: 184 VSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFA--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +T
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE +L + V Y + + + + +F+ ++++RL G ++V + VE
Sbjct: 299 WETGENLER---VARYSMEDAKVTYELGK-EFLPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P K+ A R + EPE L+ + I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWEN-IVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ + + ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDVAPQVGHRFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKKKMK 468
>gi|15723250|gb|AAL06318.1| DNA polymerase [Pan rhadino-herpesvirus 2]
Length = 389
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 44/331 (13%)
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV 418
F F +R +D DI+ GY I YL+ R + N +L T++ + S EV
Sbjct: 1 FLSFFGMLRDFDVDIITGYNISNFDIPYLITRATQV---YNLQLKDYTKI--KTGSMFEV 55
Query: 419 KN------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+++++ G I I+++++ R +++L Y + + + S+K
Sbjct: 56 HAPKVGGGGFMRSVSKIKISGIIAIDMYQVCREKLSLSDYKLNTVAQQCMGSKKEDVSYK 115
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R+ + ++ ++ L+ + L++ SE+A+L I VL
Sbjct: 116 DIPPLYRSGATGRSRVGRYCVMDSVLV-----MDLLKMFMIHIEISEIAKLAKIPVRRVL 170
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + N++ PS + ++ P Y DP++V+DF
Sbjct: 171 TDGQQIRVLSCLLEAAAQENYILPVPSTTAPGGYQGAT----VINPMPGFYDDPVLVVDF 226
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C+ST + +H DL++ + + +S V
Sbjct: 227 ASLYPSIIQAHNLCYSTLIH--DH------------DLHLYHTLTEHDYETFVLSGGKVH 272
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV K R +L K+L L R +++++ E
Sbjct: 273 FVKKHKRESLLAKLLTAWLSKRKQIRKTLAE 303
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DP++V+DF SLYPS+I A+N C+ST +
Sbjct: 216 FYDDPVLVVDFASLYPSIIQAHNLCYSTLI 245
>gi|265509543|gb|ACY75557.1| DNA polymerase [Symphalangus syndactylus lymphocryptovirus 2]
Length = 698
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 355 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYVLDRARHIYGINPASLGKIRAGGVCEV 414
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL--------HE 458
+ + + NT++++ G I I+++ + R +++L Y + + H+L ++
Sbjct: 415 RRPHDAGKGFLRANTKVRITGLIPIDMYAVCRDKLSLSDYKLDTVARHLLGAKKEDVHYK 474
Query: 459 RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQF 518
IP +L R L + + L+ + L+ +E+A++ I
Sbjct: 475 EIP----RLFAEGPGGRRRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPC 525
Query: 519 YEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL G Q RV S +L ++ +F+ PS R + +++P S Y P++
Sbjct: 526 RRVLDDGQQIRVFSCLLAAAQKEDFILPMPSASDRDGYQGAT----VIQPLSGFYNSPVL 581
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
V+DF SLYPS+I A+N C+ST
Sbjct: 582 VVDFASLYPSIIQAHNLCYST 602
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 12/49 (24%)
Query: 101 FPSSSSRDR------------LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PS+S RD Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 554 MPSASDRDGYQGATVIQPLSGFYNSPVLVVDFASLYPSIIQAHNLCYST 602
>gi|9625965|ref|NP_040211.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|118886|sp|P24907.1|DPOL_SHV21 RecName: Full=DNA polymerase
gi|67033|pir||DJBEM2 DNA-directed DNA polymerase (EC 2.7.7.7) - saimiriine herpesvirus 1
(strain 11)
gi|60330|emb|CAA45632.1| DNA polymerase [Saimiriine herpesvirus 2]
gi|331057|gb|AAA46165.1| DNA polymerase [Saimiriine herpesvirus 2]
Length = 1009
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 158/358 (44%), Gaps = 55/358 (15%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---- 409
+E ++ F +R ++ +I+ GY I YL++R + N +LS + V+
Sbjct: 345 SEIDMLHGFFSLIRDFNVEIITGYNISNFDLPYLIDRATQI---YNIKLSDYSRVKTGSI 401
Query: 410 -KRNSSRDEVKN-----TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ ++ +D +++++ G I I+++ + + +++L +Y + + H + +
Sbjct: 402 FQVHTPKDTGNGFMRSVSKIKISGIIAIDMYIVCKDKLSLSNYKLDTVANHCIGAKKEDV 461
Query: 464 SWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
S+K L E R + + ++ L+ ++L++ SE+A+L I
Sbjct: 462 SYKDIMPLFMSGPEGRAKIGLYCVIDSVLV-----MKLLKFFMIHVEISEIAKLAKIPTR 516
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL+ G Q RV S +L +R N++ VS + A ++ P Y + ++
Sbjct: 517 RVLTDGQQIRVFSCLLAAARAENYILPVSNDVNADGFQGAT-----VINPIPGFYNNAVL 571
Query: 579 VLDFQSLYPSVIIAYNYCFST-----CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQN 633
V+DF SLYPS+I A+N C+ST L HL SD +
Sbjct: 572 VVDFASLYPSIIQAHNLCYSTLIPHHALHNYPHLKSSD-------------------YET 612
Query: 634 LTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
+S + FV K I+ +L ++L L R ++Q + E E L T+L+ L
Sbjct: 613 FMLSSGPIHFVKKHIQASLLSRLLTVWLSKRKAIRQKLAE---CEDLDTKTILDKQQL 667
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST-----CLGRVEHLGVSD 149
Y + ++V+DF SLYPS+I A+N C+ST L HL SD
Sbjct: 565 FYNNAVLVVDFASLYPSIIQAHNLCYSTLIPHHALHNYPHLKSSD 609
>gi|340343168|emb|CCA95021.1| DNA polymerase delta, partial [Dipylidium caninum]
Length = 350
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
+RL+++L + EMAR+ G+ +L+RG Q +V S +LR ++ NNF+ + Q
Sbjct: 38 LRLLDKLMSVVNNVEMARVTGVPITYLLTRGQQVKVLSQLLRKAKENNFLLPTQKPGQSE 97
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
++EP Y +PI LDF SLYPS+++A+N C++T L R E + S
Sbjct: 98 EYVGAT----VIEPRRGFYNEPITTLDFSSLYPSIMMAHNLCYTTLL-RPEDISNSGGIN 152
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
N+ + +PSG FV K IR G+LP + +++L R K +
Sbjct: 153 NLLAKYNLG-------PDDYIRTPSGSYFVKKHIRKGLLPMIFEKLLAARKKAKSEL 202
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 71 SSLERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIA 130
S L R K ++ PT+K + + + R Y +PI LDF SLYPS+++A
Sbjct: 75 SQLLRKAKENNFLLPTQKPGQSEEYVGATVI---EPRRGFYNEPITTLDFSSLYPSIMMA 131
Query: 131 YNYCFSTCL 139
+N C++T L
Sbjct: 132 HNLCYTTLL 140
>gi|428184446|gb|EKX53301.1| DNA polymerase delta catalytic subunit, partial [Guillardia theta
CCMP2712]
Length = 910
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 145/321 (45%), Gaps = 46/321 (14%)
Query: 366 VRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRI----TEVEKRNSSRDEVKNT 421
V + D D+L G+ I Y+ R VL L EL R+ T ++ +S +
Sbjct: 272 VHELDLDLLTGHNIFKFDLNYIARRAQVLKLPEFFELGRMKGKYTAIKTTDSQSKAFGHN 331
Query: 422 Q---LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL----HERIPLHSWKLLTCWWEH 474
Q L M GR+ +++++++ + L SY +++ H L + P ++ H
Sbjct: 332 QFHYLPMTGRMQMDIYQVMTKQHKLSSYKLDSLAKHFLGMQKDDVSPKQIFEFQVKDASH 391
Query: 475 RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIM 534
R + K+ + L+ RLIE+LD + + EM+++ G+ ++ +RG Q +V + +
Sbjct: 392 RGIVAKYCAKDCELV-----YRLIERLDVLPQFLEMSKVTGVTMNDLNTRGQQIKVFTQI 446
Query: 535 LRLSRLNNFVA----VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+R +R ++FV +P+ + + +L P+ +Y +PI LDF SLYPS+I
Sbjct: 447 VREARASDFVIPDMRAAPTSRDDVQYQGA----FVLPPQRGIYHEPIATLDFASLYPSII 502
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
N + T + L + P CI + + ++ ++
Sbjct: 503 RGDNLSYETLVQNECEL--DEDTPVSCIQ-EYTYKYVQHVE------------------- 540
Query: 651 GILPKMLQEILDTRLMVKQSM 671
GILP++ + +L R K+ M
Sbjct: 541 GILPRICKNLLTARKKAKKEM 561
>gi|15723246|gb|AAL06316.1| DNA polymerase [Pan rhadino-herpesvirus 2]
Length = 364
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 44/331 (13%)
Query: 359 FSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEV 418
F F +R +D DI+ GY I YL+ R + N +L T++ + S EV
Sbjct: 1 FLSFFSMLRDFDVDIITGYNISNFDIPYLITRATQV---YNLQLKDYTKI--KTGSMFEV 55
Query: 419 KN------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+++++ G I I+++++ R +++L Y + + + S+K
Sbjct: 56 HAPKVGGGGFMRSVSKIKISGIIAIDIYQVCREKLSLSDYKLNTVAQQCMGSKKEDVSYK 115
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R+ + ++ ++ L+ + L++ SE+A+L I VL
Sbjct: 116 DIPPLYRSGATGRSRVGRYCVMDSVLV-----MDLLKMFMIHIEISEIAKLAKIPVRRVL 170
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + N++ PS + ++ P Y DP++V+DF
Sbjct: 171 TDGQQIRVLSCLLEAAAQENYILPVPSTTAPGGYQGAT----VINPMPGFYDDPVLVVDF 226
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C+ST + +H DL++ + + +S V
Sbjct: 227 ASLYPSIIQAHNLCYSTLIH--DH------------DLHLYHTLTEHDYETFVLSGGKVH 272
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
FV K R +L K+L L R +++++ E
Sbjct: 273 FVKKHKRESLLAKLLTAWLSKRKQIRKTLAE 303
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DP++V+DF SLYPS+I A+N C+ST +
Sbjct: 216 FYDDPVLVVDFASLYPSIIQAHNLCYSTLI 245
>gi|151368510|gb|ABH05845.2| DNA polymerase, partial [Nyctalus noctula rhadinovirus 2]
Length = 765
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 20/257 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-----EV 408
+E ++F F +R ++ + + GY I + YL++R + +E +R+ EV
Sbjct: 372 SELDMFFAFFSMLRDFNIEFVTGYNIANFDFPYLIDRATKVYNFCLKEYARVKTGAVFEV 431
Query: 409 EK-RNSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K R+S ++ +++++ G + I+++ + R +++L Y + H ++ + ++K
Sbjct: 432 HKPRDSGAGFMRAVSKIKITGLVAIDMYIVCRDKLSLSDYKLNTVAQHCMNSKKEDVTYK 491
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R+ L + + L+ + L+ Q SE+A+L I VL
Sbjct: 492 EIPGLFRAGPGGRSKLGAYCVQDAALV-----MALLRQFVTHVEISEIAKLANIPVRRVL 546
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L +R N++ P + A + ++ P Y +P++V+DF
Sbjct: 547 YDGQQIRVFSCLLAAARAENYILPVPDARPEAGYQGAT----VISPIPGFYDNPVLVVDF 602
Query: 583 QSLYPSVIIAYNYCFST 599
SLYPS+I A+N C+ T
Sbjct: 603 ASLYPSIIQAHNLCYCT 619
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 79 PDDRPSPTRKNKSTRSSFDSDMFPSSSSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
PD RP + + S Y +P++V+DF SLYPS+I A+N C+ T
Sbjct: 572 PDARPEAGYQGATVISPIPG-----------FYDNPVLVVDFASLYPSIIQAHNLCYCT 619
>gi|313208664|emb|CBH41122.1| DNA polymerase delta, partial [Echinococcus multilocularis]
Length = 350
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 160 LGP-----DDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
R Y +PI LDF SLYPS+++A+N C++T L R E + S G I S +N
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISAS-----GGIGSLLAN 157
>gi|313208682|emb|CBH41126.1| DNA polymerase delta, partial [Echinococcus felidis]
gi|313208687|emb|CBH41128.1| DNA polymerase delta, partial [Echinococcus equinus]
Length = 350
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 160 LGP-----DDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
R Y +PI LDF SLYPS+++A+N C++T L R E + S G I S +N
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISAS-----GGIGSLLAN 157
>gi|313208674|emb|CBH41124.1| DNA polymerase delta, partial [Echinococcus vogeli]
Length = 350
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 160 LGP-----DDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
R Y +PI LDF SLYPS+++A+N C++T L R E + S G I S +N
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISAS-----GGIGSLLAN 157
>gi|313208671|emb|CBH41123.1| DNA polymerase delta, partial [Echinococcus shiquicus]
Length = 350
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 160 LGP-----DDCIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL 140
>gi|3913540|sp|Q56366.1|DPOL_THES9 RecName: Full=DNA polymerase
gi|1197452|gb|AAA88769.1| DNA polymerase [Thermococcus sp. 9oN-7]
Length = 775
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F+ VR+ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WESGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLS-RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + + N P ++ A R + + EPE L+ D I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYKRNELAPNKPDERELARRRGGYAGGYVKEPERGLW-DNIVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ K ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDVAPEVGHKFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKRKMK 468
>gi|8569297|pdb|1QHT|A Chain A, Dna Polymerase From Thermococcus Sp. 9on-7 Archaeon
Length = 775
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F+ VR+ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WESGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLS-RLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + + N P ++ A R + + EPE L+ D I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYKRNELAPNKPDERELARRRGGYAGGYVKEPERGLW-DNIVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ K ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDVAPEVGHKFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKRKMK 468
>gi|313208684|emb|CBH41127.1| DNA polymerase delta, partial [Echinococcus granulosus]
Length = 350
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPDQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E + S + N+
Sbjct: 103 TVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTFL-RPEDISASGGIGGLLANYNLG 161
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 162 -------PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
R Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTFL 140
>gi|116754694|ref|YP_843812.1| DNA polymerase Pol2 [Methanosaeta thermophila PT]
gi|116666145|gb|ABK15172.1| replicative DNA polymerase I [Methanosaeta thermophila PT]
Length = 941
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 149/330 (45%), Gaps = 49/330 (14%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRN 412
++E+ L S F+ + +DPDI+ GY YL ER LG+ +N V +
Sbjct: 265 ADERALISRFVSVIDDYDPDIIAGYNSNEFDIPYLRERASRLGIEMN--------VGRDG 316
Query: 413 SS---RDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHSWKLL 468
S+ R N + + GR+V++L ++R +L+ YT N ++ E+ + ++
Sbjct: 317 STWLIRSMGSNKNVAVTGRVVVDLLPIIRSSFSLKQYTLRNAAMELIGEEKRDMDPARME 376
Query: 469 TCW--WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ W + L ++ + L+ + + + +AR+ G ++++ G
Sbjct: 377 SIWLGGDGLADLIRYSRRDAVLVMQLLLRLRLMD-----KYIALARVSGSLLQDIVNGGQ 431
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPL----ILEPESRLYTDPIIVLDF 582
VE+++LR R + V + + R ++ L +L P L + +++LD+
Sbjct: 432 SGMVENLILRRFRSHKRVLPPKPDSEESGERFTDADELKGGAVLPPVKGLVEN-VVILDY 490
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
+SLYP++++A+N C+ST + K+ + SPSG
Sbjct: 491 KSLYPTIMMAHNLCYSTVV-------------------------TKERPPEVVKSPSGGY 525
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
F S+ GI+P++L+E+L+ R K MK
Sbjct: 526 FASPSVCKGIVPEILRELLEKRTETKMLMK 555
>gi|293323345|emb|CBJ17982.1| DNA polymerase delta [Echinococcus oligarthrus]
Length = 350
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 103 SVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 160 LGP-----DDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
R Y +PI LDF SLYPS+++A+N C++T L R E + S G I S +N
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISAS-----GGIGSLLAN 157
>gi|16081956|ref|NP_394366.1| DNA polymerase II [Thermoplasma acidophilum DSM 1728]
gi|10640184|emb|CAC12036.1| DNA polymerase (PolB), large chain related protein [Thermoplasma
acidophilum]
Length = 796
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 163/356 (45%), Gaps = 53/356 (14%)
Query: 323 ENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETL 382
ENV + ++IGY + +F G + E+++ F++ +R DPD++ GY I+
Sbjct: 170 ENVEDYGKILVIGYSV-SFQ-GKTVTGSLSGEEQDILRSFVDLIRAEDPDVITGYNIDGY 227
Query: 383 SWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVN 442
+ +R G+ L E+ R + +R + N ++ GR++ + W ++ ++
Sbjct: 228 DIPVIKKRMDRYGIKL--EIGRDGSIPRR------IMNQFWRVHGRLISDTWWSVKRILH 279
Query: 443 LQSYTFENIMYHVLHE-RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQL 501
+ + + + +L E + + + W + R + + + L +R+ E+L
Sbjct: 280 PKHESLDYVANMLLGEGKDNIDRLHIEDEWKKRREEVIAYCIKDADLT-----LRIFEKL 334
Query: 502 DFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPES 561
+ R M+ + + +V + G+ V+SI++R + N + H E
Sbjct: 335 MVMNRLMYMSSVTKLPLDDVANVGTSNYVDSILIRAADRENI-----GVPMNQHEIKTEE 389
Query: 562 L--PLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCID 619
+ + + LY++ +IVLDF+S+YPS+II YN CF+T +D
Sbjct: 390 IQGGYVHSIGAGLYSN-VIVLDFKSMYPSMIIKYNVCFTT------------------LD 430
Query: 620 LNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
N I +SP+GV F+ + G++P++LQE++ R VK+ MK K
Sbjct: 431 PNGEI-----------LSPNGVRFLSPEKKKGLIPRILQELMADRDEVKRRMKAAK 475
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
LY++ +IVLDF+S+YPS+II YN CF+T
Sbjct: 402 LYSN-VIVLDFKSMYPSMIIKYNVCFTT 428
>gi|301331782|gb|ADK70862.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 768
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 379 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 438
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ S+K +
Sbjct: 439 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVSYKQI 497
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 498 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISINKVVFDGQQ 555
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 556 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 611
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D++ + SL++ + + +G FV
Sbjct: 612 SIIQAYNLCYCTL--------ITDNY----------VASLREEDITMVTTNTGRVHRFVK 653
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 654 PHVRKSILSQLLTSWLAERKAVREKLKHCK 683
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 593 KTGFYNTPVAVFDFASLYPSIIQAYNLCYCT 623
>gi|343963289|gb|AEM72572.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 775
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 379 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 438
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ S+K +
Sbjct: 439 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVSYKQI 497
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 498 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISINKVVFDGQQ 555
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 556 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 611
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D++ + SL++ + + +G FV
Sbjct: 612 SIIQAYNLCYCTL--------ITDNY----------VASLREEDITMVTTNTGRVHRFVK 653
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 654 PHVRKSILSQLLTSWLAERKAVREKLKHCK 683
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 593 KTGFYNTPVAVFDFASLYPSIIQAYNLCYCT 623
>gi|52493125|gb|AAU81560.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493127|gb|AAU81561.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493131|gb|AAU81563.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493133|gb|AAU81564.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
gi|52493137|gb|AAU81566.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 673
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 41/280 (14%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG--YVLGLNLNQELSRITEVEKR 411
+E EL F +Q+ P+ L GY I +L+ + Y L L+ L R +
Sbjct: 57 SEYELLLAFFTFFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKLDGYGRLERGGQFRVI 116
Query: 412 NSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ S + KN ++++ G + ++++ LLR +++L +Y + + VL E S+K +
Sbjct: 117 DLSENRFQKNIKVRINGTVTLDVYPLLRGKLSLPNYKLDTVCREVLGETKRDVSYKEIPT 176
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ E R L + + L+ RL E+ SE+A+L + +++ G
Sbjct: 177 LYGQGPEGRGLLGDYCLQDSALV-----CRLFEKFAPHVEMSEVAKLAHLPMNRIMTDGQ 231
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----------------------- 563
Q RV + +L+ +R ++ +A + P+ P
Sbjct: 232 QIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPEEGTEEENETENGAYTGD 291
Query: 564 ------LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+LEPE+ Y DP+ V DF SLYPS+I A+N CF
Sbjct: 292 KGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCF 331
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCF 135
Y DP+ V DF SLYPS+I A+N CF
Sbjct: 306 FYVDPVTVFDFASLYPSIIQAHNLCF 331
>gi|385303048|gb|EIF47148.1| catalytic subunit of dna polymerase delta [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 118/238 (49%), Gaps = 35/238 (14%)
Query: 431 INLWRLLRHEVNLQSYTFENIMYHVLHER---IPLHS--WKLLTCWWEHRTHLYKWMTVE 485
++L++ ++ E L+SY + H L E+ +P HS +L E R L + +
Sbjct: 3 LDLFQFIQREYKLRSYXLNAVSSHFLGEQKEDVP-HSIITQLQNGTPETRRRLAVYCLKD 61
Query: 486 HYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVA 545
YL +RL+E+L + +EMAR+ G+ F +LSRG Q +V S + R +
Sbjct: 62 SYLP-----LRLMEKLMCLVNYTEMARVTGVPFSFLLSRGQQIKVISQLFR--KCLELDX 114
Query: 546 VSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE 605
V P++K E +I P Y PI LDF SLYPS+++A+N C++T + R
Sbjct: 115 VIPNMKSENVNEEYEGATVI-SPARGYYDVPIATLDFASLYPSIMMAHNVCYTTLVDR-- 171
Query: 606 HLGVSDSFPFGCIDLNVSIRSLKKLQQNLT--ISPSGVAFVDKSIRCGILPKMLQEIL 661
+I L +L++N+ +SP G FV + R GILP +L+E+L
Sbjct: 172 ----------------ATIDRL-QLKENVDYEVSPKGDCFVTAARRLGILPTILKELL 212
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRV 142
Y PI LDF SLYPS+++A+N C++T + R
Sbjct: 141 YDVPIATLDFASLYPSIMMAHNVCYTTLVDRA 172
>gi|392312971|gb|AFM56565.1| DNA polymerase catalytic subunit [Equid herpesvirus 5]
Length = 1017
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 152/336 (45%), Gaps = 47/336 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLN-QELSR-----ITE 407
+E +L +F+ +R D + + GY I + Y+L+R + NLN +E +R I E
Sbjct: 356 SELDLLYLFLTMIRDMDLEFVTGYNISNFDFPYILDRASQV-YNLNPKEFTRTRSASIFE 414
Query: 408 VEK-RNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
V K +NSS +++++ G + ++++++ R +++L +Y + + + E+ S
Sbjct: 415 VHKPKNSSSSGFMRAVSKVKVAGVVPVDMYQVCREKLSLSNYKLDTVAKECVGEKKDDVS 474
Query: 465 WK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+K L E R L + + L+ + L++ SE+A++ I
Sbjct: 475 YKEIPHLFRQGPEGRAKLGTYCVKDSALV-----LDLLKYFMTHVEISEIAKIAKIPTRR 529
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
VL+ G Q RV S +L ++ F+ S + + + +++P Y P++V+
Sbjct: 530 VLTDGQQIRVFSCLLDVAGRQGFILPSGNKESSEGYQGAT----VIDPTPGFYNTPVLVV 585
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
DF SLYP++I A+N C+ST + + HLG D +
Sbjct: 586 DFASLYPTIIQAHNLCYSTMIPGDQLYLHPHLGPGD-------------------YETFE 626
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+S V FV K +L +L L R +++++
Sbjct: 627 LSSGAVHFVKKHKTASLLATLLNAWLAKRKAIRRAL 662
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVE-----HLGVSD 149
Y P++V+DF SLYP++I A+N C+ST + + HLG D
Sbjct: 577 FYNTPVLVVDFASLYPTIIQAHNLCYSTMIPGDQLYLHPHLGPGD 621
>gi|323716867|gb|ADY05311.1| DNA polymerase [Hylobates syndactylus lymphocryptovirus 1]
Length = 809
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 20/257 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + EV
Sbjct: 414 SELDMLYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGINPASLGKIRTGGVCEV 473
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ + + T++++ G I I+++ + R +++L Y + + H+L R +K
Sbjct: 474 RRPHDAGKGFLRATTKVRITGIIPIDMYAVCRDKLSLSDYKLDTVAQHLLGARKEDVHYK 533
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R L + + L+ + L+ +E+A++ I VL
Sbjct: 534 EIPRLFAQGPRGRQRLGMYCVQDSALV-----MDLLNHFVIHVEVAEIAKIAHIPCRRVL 588
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L ++ NF+ PS R + +++P S Y P++V+DF
Sbjct: 589 DDGQQIRVFSCLLAAAQKENFILPMPSALDRDGYQGAT----VIQPLSGFYNCPVLVVDF 644
Query: 583 QSLYPSVIIAYNYCFST 599
SLYPS+I A+N C+ST
Sbjct: 645 ASLYPSIIQAHNLCYST 661
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 94 SSFDSDMFPSSSSRDRL---YTDPIIVLDFQSLYPSVIIAYNYCFST 137
S+ D D + ++ L Y P++V+DF SLYPS+I A+N C+ST
Sbjct: 615 SALDRDGYQGATVIQPLSGFYNCPVLVVDFASLYPSIIQAHNLCYST 661
>gi|34395919|gb|AAF63493.2|AF239684_1 polymerase [Green turtle herpesvirus]
Length = 1097
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 60/357 (16%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG--YVLGLNLNQELSRITEVEKR 411
+E EL F +Q+ P+ GY I +L+ + Y L L+ L R +
Sbjct: 384 SEYELLLAFFTFFKQFSPEYPSGYNILGFDLPFLVNKAAAYDLKLDGYGRLERGGQFRII 443
Query: 412 NSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ S + KN ++++ G + ++++ LLR +++L Y + + VL E S+K +
Sbjct: 444 DLSENRFQKNIKVRINGTVTLDVYPLLRGKLSLPDYKLDTVCREVLGETKRDVSYKEIPA 503
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ E R L + + L+ +RL E+ SE+A V++ G
Sbjct: 504 LYGQGPEGRGLLGDYCLQDSALV-----LRLFEKFAPHVEMSEVANWRICLMNRVMTDGQ 558
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----------------------- 563
Q RV + +L+ +R ++ +A + P+ P
Sbjct: 559 QIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDLSPSLNGPEEGTEEENETENGAYTGD 618
Query: 564 ------LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGC 617
+LEPE+ Y DP+ V DF SLYPS+I A+N CF+T R E
Sbjct: 619 KGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAE------------ 666
Query: 618 IDLNVSIRSLKKLQQNLTISPSGVA--FVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+++ LK + G++ +V +R +L ++L + L R ++ SMK
Sbjct: 667 -----TLKELKAGEDYEEFKVQGMSLFYVKPHVRRSLLGELLTDWLALRKKIRASMK 718
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y DP+ V DF SLYPS+I A+N CF+T R E L
Sbjct: 633 FYVDPVTVFDFASLYPSIIQAHNLCFTTLTRRAETL 668
>gi|257076927|ref|ZP_05571288.1| DNA polymerase II [Ferroplasma acidarmanus fer1]
Length = 777
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 49/361 (13%)
Query: 316 ELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENVRQWDPDILI 375
++FS IEN +IGY + F G + E E E+ F + V++ DPDI+
Sbjct: 157 KIFSFDIENSISTREIFVIGYSV--FFNGEITEGALTGTEPEMLEDFNKLVQREDPDIIT 214
Query: 376 GYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWR 435
GY I+ L ER + N+ R + S R + + ++ GR++ + W
Sbjct: 215 GYNIDGYDMPLLEER-----MKFNK--VRFSIGRDYISPR-RIMDQYWRLHGRVIDDTWW 266
Query: 436 LLRHEVNLQSYTFENIMYHVLHE-RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGI 494
+R ++ + T + +L+E + ++ + W R + K+ + L + I
Sbjct: 267 EVRKVLHPKHETLNYVSNMLLNEGKEDVNRLDIENEWKNRRDDVIKYCIKDARLALL--I 324
Query: 495 IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRA 554
R I LD R ++ + + +V + G+ V+S+++R + N + V S + +
Sbjct: 325 YRKIRILD---RNLYLSTVSMLPLDDVTNGGTSTYVDSLLIRRADREN-IGVPMSSSKFS 380
Query: 555 HMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 614
+ ++P LY D I+VLDF+S+YPS+II YN CF+T P
Sbjct: 381 NDTYAGGYVHTMDP--GLY-DMIVVLDFKSMYPSMIIKYNICFTTLS------------P 425
Query: 615 FGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEY 674
G I ++P+G F+D ++ GI+P +L++++ R VK+ MKE
Sbjct: 426 EGTI-----------------VAPNGARFLDPGVKKGIIPDLLEQLMKNRDEVKKQMKED 468
Query: 675 K 675
K
Sbjct: 469 K 469
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 92 TRSSFDSDMFPSS--SSRDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ S F +D + + D D I+VLDF+S+YPS+II YN CF+T
Sbjct: 375 SSSKFSNDTYAGGYVHTMDPGLYDMIVVLDFKSMYPSMIIKYNICFTT 422
>gi|52551098|gb|AAU84534.1| polymerase [Fibropapilloma-associated turtle herpesvirus]
Length = 1151
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 41/280 (14%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG--YVLGLNLNQELSRITEVEKR 411
+E EL F +Q+ P+ L GY I +L+ + Y L L+ L R +
Sbjct: 384 SEYELLLAFFTFFKQFSPEYLSGYNILGFDLPFLVNKAAAYDLKLDGYGRLERGGQFRVI 443
Query: 412 NSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTC 470
+ S + KN ++++ G + ++++ LLR +++L +Y + + VL E S+K +
Sbjct: 444 DLSENRFQKNIKVRINGTVTLDVYPLLRGKLSLPNYKLDTVCREVLGETKRDVSYKEIPT 503
Query: 471 WW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGS 526
+ E R L + + L+ RL E+ SE+A+L + +++ G
Sbjct: 504 LYGQGPEGRGLLGDYCLQDSALV-----CRLFEKFAPHVEMSEVAKLAHLPMNRIMTDGQ 558
Query: 527 QFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP----------------------- 563
Q RV + +L+ +R ++ +A + P+ P
Sbjct: 559 QIRVFTCLLKAARKYGYILPDRRFGTKAQLTDPDRGPSLKGPEEGTEEENETENGAYTGD 618
Query: 564 ------LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCF 597
+LEPE+ Y DP+ V DF SLYPS+I A+N CF
Sbjct: 619 KGYQGATVLEPETGFYVDPVTVFDFASLYPSIIQAHNLCF 658
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCF 135
Y DP+ V DF SLYPS+I A+N CF
Sbjct: 633 FYVDPVTVFDFASLYPSIIQAHNLCF 658
>gi|82062616|sp|Q9DKT8.1|DPOL_ELHVK RecName: Full=DNA polymerase catalytic subunit
gi|11935168|gb|AAG41999.1|AF322977_3 DNA polymerase [Elephantid herpesvirus 1]
Length = 1041
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 379 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 438
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ S+K +
Sbjct: 439 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVSYKQI 497
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 498 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISINKVVFDGQQ 555
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 556 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 611
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D++ + SL++ + + +G FV
Sbjct: 612 SIIQAYNLCYCTL--------ITDNY----------VASLREEDITMVTTNTGRVHRFVK 653
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 654 PHVRKSILSQLLTSWLAERKAVREKLKHCK 683
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 596 FYNTPVAVFDFASLYPSIIQAYNLCYCT 623
>gi|397565087|gb|EJK44470.1| hypothetical protein THAOC_36985 [Thalassiosira oceanica]
Length = 1658
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 52/245 (21%)
Query: 341 FSWGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLG----- 395
S G ++E+ S+E+ L F V+ DPD L+ ++ L GY++ERG LG
Sbjct: 1067 ISSGTVIEK--ASSERSLLLRFASIVKLKDPDCLMSWDTLGLGIGYIVERGVALGKPGTD 1124
Query: 396 --------------------------LNLNQELSRITEVEKRNSSRDEVKNTQL------ 423
N++Q + ++ +S D +K + L
Sbjct: 1125 HNGVNASSQTVDMARLLGRTPKSVPSANMSQNAGPLDMLKGEDSHVD-LKGSGLGAEWDD 1183
Query: 424 ---------QMPGRIVINLWRLLRHEVNLQSYTFE-NIMYHVLHERIPLHSWKLLTCWWE 473
+ GRIV+ W++ E + +++ I+ ++++R+P H +LT W+
Sbjct: 1184 RVGAGVAASSISGRIVLCGWKICSTECKHPNASYQPAIVSSIMNKRMPHHDDLILTKWYG 1243
Query: 474 HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS--RGSQFRVE 531
+W +E+ +++ I L + LD +GR E ARL G++F + L RGSQ++VE
Sbjct: 1244 MNNGAQRWRVIEYRMLQAMANILLFDALDVLGRAGEAARLSGVEFSQSLPGIRGSQYKVE 1303
Query: 532 SIMLR 536
++LR
Sbjct: 1304 GVLLR 1308
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 25/154 (16%)
Query: 547 SPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 606
SPS A E + LEP+S Y DP++V DF +LYPS++IAYN C++T G++++
Sbjct: 1380 SPSKIDCTKQEALECQAMTLEPQSGFYFDPVVVCDFTALYPSLVIAYNLCYTTLAGKLDY 1439
Query: 607 -------------LGVSDSFPFGCIDLNVSIR------------SLKKLQQNLTISPSGV 641
G F + +IR K+ + + P+G
Sbjct: 1440 HSTRAEMRREGKTTGKVGPFFYSERRTAATIRHHMKTLSVPSSQGKKRKRDRAYVIPTGS 1499
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV +S+ G+LP++L E+L TR M+K++ KEYK
Sbjct: 1500 VFVSESVLKGVLPQVLDEMLSTRAMLKKAAKEYK 1533
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEH 144
Y DP++V DF +LYPS++IAYN C++T G++++
Sbjct: 1405 FYFDPVVVCDFTALYPSLVIAYNLCYTTLAGKLDY 1439
>gi|240103512|ref|YP_002959821.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus
gammatolerans EJ3]
gi|239911066|gb|ACS33957.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus
gammatolerans EJ3]
Length = 775
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F+ V++ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +T
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEITEA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WESGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P ++ A R + + EPE L+ D I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYERNELAPNKPDERELARRRESYAGGYVKEPERGLW-DNIVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ K ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDVAPEVGHKFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKRKMK 468
>gi|327207073|gb|AEA39187.1| DNA polymerase [Procavia capensis gammaherpesvirus 2]
Length = 736
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 20/259 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGY-VLGLNLNQ----ELSRITEV 408
+E ++F+ F +R ++ + + GY I W YL++R V NL + + I EV
Sbjct: 344 SELDMFAAFFSMIRDFNVEFITGYNIANFDWPYLIDRATNVYNFNLKKYTRVKTGAIFEV 403
Query: 409 EKRNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K S +++++ G + I+++ + R +++L Y + + + ++K
Sbjct: 404 HKPRDSGAGFSRAVSKVKIAGVVSIDMYMVARDKLSLSDYKLNTVAKQCVGAKKEDVTYK 463
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L E R + + + L+ + L++ SE+A++ I VL
Sbjct: 464 EIPGLFRSGPEGRAKIGLYCVQDSVLV-----LDLLKYFMTHVEISEIAKIAKIPTRRVL 518
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L ++R N++ P+ KQ + +++P Y+ P++V+DF
Sbjct: 519 ADGQQIRVFSCLLAVARDTNYIL--PTAKQEEGEGYQGAT--VIQPLPGFYSTPVLVVDF 574
Query: 583 QSLYPSVIIAYNYCFSTCL 601
SLYPS+I A+N C+ST +
Sbjct: 575 ASLYPSIIQAHNLCYSTLI 593
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y+ P++V+DF SLYPS+I A+N C+ST +
Sbjct: 564 FYSTPVLVVDFASLYPSIIQAHNLCYSTLI 593
>gi|313208679|emb|CBH41125.1| DNA polymerase delta, partial [Echinococcus oligarthrus]
Length = 350
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPT----QRPGQGDEYVGG 102
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 103 SVIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L R+ K+ M
Sbjct: 160 LGP-----DDYIRTPTGAYFVKKHIRKGLLPCVLEQLLKARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
R Y +PI LDF SLYPS+++A+N C++T L R E + S G I S +N
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISAS-----GGIGSLLAN 157
>gi|402588589|gb|EJW82522.1| DNA polymerase [Wuchereria bancrofti]
Length = 638
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 27/250 (10%)
Query: 428 RIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHY 487
R+V +++ + L+SY+ ++ YH L E+ + ++ + + + Y
Sbjct: 16 RLVNRKSQVVLRDYKLRSYSLNSVSYHFLCEQKEDVDYSMIADLQNGNAFTRRRLAI--Y 73
Query: 488 LIRVTGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAV 546
++ + ++L+++L I EMAR+ G+ +LSRG Q +V S +LR ++ +F
Sbjct: 74 CMKDAYLPLKLLQKLMSIINYIEMARVTGVPLDYLLSRGQQVKVMSQILRKAKSLHFFLP 133
Query: 547 SPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVE 605
I Q + +++P Y PI LDF SLYPS++IA+N C++T + G
Sbjct: 134 VIDIVQADDTYEGAT---VIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRGSNA 190
Query: 606 HLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRL 665
+SDS + ++PS FV +IR G+LP++L+++L+ R
Sbjct: 191 THNLSDS--------------------DFEVTPSNNRFVKSNIRRGLLPQVLEDLLNARK 230
Query: 666 MVKQSMKEYK 675
K +K K
Sbjct: 231 QAKNDLKNEK 240
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHLGVSDS 150
Y PI LDF SLYPS++IA+N C++T + G +SDS
Sbjct: 156 FYNTPIATLDFASLYPSIMIAHNLCYTTLIRGSNATHNLSDS 197
>gi|313208690|emb|CBH41129.1| DNA polymerase delta, partial [Echinococcus ortleppi]
gi|313208694|emb|CBH41130.1| DNA polymerase delta, partial [Echinococcus canadensis]
gi|313208698|emb|CBH41131.1| DNA polymerase delta, partial [Echinococcus canadensis]
gi|313208701|emb|CBH41132.1| DNA polymerase delta, partial [Echinococcus canadensis]
Length = 350
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR +R + + + Q
Sbjct: 47 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRKAREHGLLLPTHRPGQGDEYVGGT--- 103
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP Y +PI LDF SLYPS+++A+N C++T L R E +S S G + N +
Sbjct: 104 -VIEPRRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPED--ISASGGIGSLLANYN 159
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ + +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 160 LGP-----DDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARMKAKREM 202
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIASRESN 162
R Y +PI LDF SLYPS+++A+N C++T L R E + S G I S +N
Sbjct: 108 RRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISAS-----GGIGSLLAN 157
>gi|380016496|ref|XP_003692219.1| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Apis florea]
Length = 941
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 1 LCLARGFICELCNSEEVIFPWQLSSVHRCNQCGACFHTKCH---SQLPCKRCIRMRIRRD 57
LC ARGF+CELC S++VIFPW+ S V+RC CGACFH +C +++ C RCIR+R RR
Sbjct: 877 LCQARGFVCELCYSKDVIFPWEFSKVNRCEMCGACFHNECKQNFNKIDCPRCIRLRARRI 936
Query: 58 S 58
S
Sbjct: 937 S 937
>gi|313208723|emb|CBH41138.1| DNA polymerase delta, partial [Taenia serialis]
Length = 307
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 4 VANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGG 59
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP+ Y +PI LDF SLYPS+++A+N C++T L + E + S + N+
Sbjct: 60 TVIEPQRGFYNEPITTLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANYNLG 118
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
K +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 119 PDDYIK-------TPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPITTLDFSSLYPSIMVAHNLCYTTLL 97
>gi|340343154|emb|CCA95014.1| DNA polymerase delta, partial [Taenia mustelae]
Length = 307
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
EMAR+ G+ +L RG Q +V S +LR ++ + + + QR ++EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAKEHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+ Y +PI LDF SLYPS+++A+N C++T L + +S S G + ++
Sbjct: 65 QRGFYNEPITTLDFSSLYPSLMVAHNLCYTTLLKPED---ISASGGIGSLSAKYNLGP-- 119
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K IR G+LP +L+++L+ R+ K+ M
Sbjct: 120 ---DDYIRTPTGAYFVKKHIRKGLLPSVLEQLLEARMKAKREM 159
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPITTLDFSSLYPSLMVAHNLCYTTLL 97
>gi|313208720|emb|CBH41137.1| DNA polymerase delta, partial [Taenia hydatigena]
Length = 307
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
L + EMAR+ G+ +L RG Q +V S +LR ++++ + + QR
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKAKVHGLLLPT----QRPGQGDEY 56
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
++EP+ Y +PI LDF SLYPSV++A+N C++T L + E++ S G +
Sbjct: 57 VGGTVIEPQRGFYNEPIATLDFSSLYPSVMVAHNLCYTTFL-KPENISAS-----GGLSS 110
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
++I +L + +P+G FV K IR G+LP L+++L+ R K+ M
Sbjct: 111 LLAIYNLGP--DDYIRTPAGAYFVKKHIRKGLLPCALEQLLEARAKAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPSV++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSVMVAHNLCYTTFL 97
>gi|313208712|emb|CBH41135.1| DNA polymerase delta, partial [Taenia asiatica]
Length = 307
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
L + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRQGQGDEY 56
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
++EP+ Y +PI LDF SLYPS+++A+N C++T L + E + S +
Sbjct: 57 VGGTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANY 115
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
N+ + +P G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 116 NLG-------PDDYIRTPGGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|301331722|gb|ADK70825.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHFVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|313208709|emb|CBH41134.1| DNA polymerase delta, partial [Taenia saginata]
Length = 307
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 501 LDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPE 560
L + EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 1 LMLVANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEY 56
Query: 561 SLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDL 620
++EP+ Y +PI LDF SLYPS+++A+N C++T L + E + S +
Sbjct: 57 VGGTVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANY 115
Query: 621 NVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
N+ + +P G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 116 NLG-------PDDYIRTPGGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|38201798|gb|AAO46909.1| DNA polymerase [Sus barbatus lymphotropic herpesvirus 1]
Length = 1000
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 34/328 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL------SRITE 407
+E ++ F +R +D +I+ GY I + Y+L R V+ N+ E I +
Sbjct: 344 SELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRANVI-YNMKAESYTRTKSGSIFQ 402
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
V K NT++++ G +VI+++ + + +++L +Y + + E+ S+K
Sbjct: 403 VHKPKDGNFLRSNTKVKISGLVVIDMYMISKEKLSLSNYKLNTVAKECVGEKKEDVSYKE 462
Query: 468 LTCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ ++ R L + + L+ + L++ SE+A++ I V++
Sbjct: 463 IPALFKGSANDRARLGLYCVQDSILV-----MDLLKYFMTHVEISEIAKIANIPMRRVIT 517
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
G Q RV S +L ++ ++ + Q A+ + +I P S Y P++V+DF
Sbjct: 518 DGQQIRVFSCLLASAKSRGYIL---PVSQTANFEGYQGATVI-SPLSGFYNTPVLVVDFA 573
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+I A+N C+ST + DL+ + + + IS V F
Sbjct: 574 SLYPSIIQAHNLCYSTLIHHE--------------DLHKHPQLKESDYETFVISSGPVHF 619
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V K I +L +L L R +++ +
Sbjct: 620 VKKHISESLLSNLLTTWLAKRKTIRKEL 647
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P++V+DF SLYPS+I A+N C+ST +
Sbjct: 562 FYNTPVLVVDFASLYPSIIQAHNLCYSTLI 591
>gi|340343156|emb|CCA95015.1| DNA polymerase delta, partial [Taenia madoquae]
Length = 307
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
EMAR+ G+ +L RG Q +V S +LR +R + + + QR ++EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+ Y +PI LDF SLYPS+++A+N C++T L + E + S + N+
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANYNLGPDDYI 123
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
K +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 124 K-------TPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|313208726|emb|CBH41139.1| DNA polymerase delta, partial [Taenia multiceps]
Length = 307
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 4 VANNVEMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGG 59
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP+ Y +PI LDF SLYPS+++A+N C++T L + E + S + N+
Sbjct: 60 TVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANYNLG 118
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
K +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 119 PDDYIK-------TPAGAYFVKKHIRKGLLPCVLEQLLEARTRAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|171988558|gb|AAO46905.2| DNA polymerase [Gorilla rhadinovirus 1]
Length = 752
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 23/268 (8%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-----EV 408
+E ++ + F+ +R +D D L GY I Y++ R + Q+ ++I EV
Sbjct: 358 SEYDMLTAFLTMIRDYDVDFLTGYNIANFDLPYIIARATQVYNFKLQDFTKIKTGSVFEV 417
Query: 409 EKRNSSRDEVK----NTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHS 464
+ + +++++ G + I+++++ R +++L Y + + L +R S
Sbjct: 418 HQPRGGSEGGNFMRSQSKVKISGIVPIDMYQVCRDKLSLSDYKLDTVANQCLGQRKEDIS 477
Query: 465 WK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYE 520
+K L E R + + ++ L+ + L+ + SE+A+L I
Sbjct: 478 YKEIPPLFKSGPEGRAKVGNYCVIDSVLV-----MDLLLRFQTHVEISEIAKLAKIPSRR 532
Query: 521 VLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
VL+ G Q RV S +L + ++ P+ + + ++ P Y DP++V+
Sbjct: 533 VLTDGQQIRVFSCLLEAATAEGYILPVPNGNATSGYQGAT----VINPLPGFYDDPVLVV 588
Query: 581 DFQSLYPSVIIAYNYCFSTCL-GRVEHL 607
DF SLYPS+I A+N C+ST + G HL
Sbjct: 589 DFASLYPSIIQAHNLCYSTLIPGDSLHL 616
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHL 145
Y DP++V+DF SLYPS+I A+N C+ST + G HL
Sbjct: 580 FYDDPVLVVDFASLYPSIIQAHNLCYSTLIPGDSLHL 616
>gi|340343152|emb|CCA95013.1| DNA polymerase delta, partial [Taenia laticollis]
Length = 307
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + EMAR+ G+ +L RG Q +V S +LR ++ N + + QR
Sbjct: 4 VANSVEMARVTGVPIAYLLKRGQQVKVISQLLRRAKGNGLLLPT----QRPGQGDEYVGG 59
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP+ Y +PI LDF SLYPS+++A+N C++T L R E + S + N+
Sbjct: 60 TVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISASGGLSGLLANYNLG 118
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K +R G+LP +L+++L+ R K M
Sbjct: 119 -------PDDYIRTPTGAYFVKKHVRKGLLPCVLEQLLEARTKAKCEM 159
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 151
Y +PI LDF SLYPS+++A+N C++T L R E + S
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL-RPEDISASGGL 108
>gi|301331841|gb|ADK70892.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 1041
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 379 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 438
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ S+K +
Sbjct: 439 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVSYKQI 497
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 498 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISINKVVFDGQQ 555
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML ++ + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 556 SRIFTCMLAAAKREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 611
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D++ + SL++ + + +G FV
Sbjct: 612 SIIQAYNLCYCTL--------ITDNY----------VASLREEDITMVTTNTGRVHRFVK 653
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 654 PHVRKSILSQLLTSWLAERKAVREKLKHCK 683
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 596 FYNTPVAVFDFASLYPSIIQAYNLCYCT 623
>gi|340343160|emb|CCA95017.1| DNA polymerase delta, partial [Taenia ovis]
Length = 307
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
EMAR+ G+ +L RG Q +V S +LR +R + + + QR ++EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+ Y +PI LDF SLYPS+++A+N C++T L + E + S + N+
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANYNLG----- 118
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 119 --PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|343963261|gb|AEM72554.1| U38 [Elephant endotheliotropic herpesvirus 1B]
Length = 938
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 379 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 438
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ S+K +
Sbjct: 439 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVSYKQI 497
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 498 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISINKVVFDGQQ 555
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML ++ + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 556 SRIFTCMLAAAKREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 611
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D++ + SL++ + + +G FV
Sbjct: 612 SIIQAYNLCYCTL--------ITDNY----------VASLREEDITMVTTNTGRVHRFVK 653
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 654 PHVRKSILSQLLTSWLAERKAVREKLKHCK 683
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 596 FYNTPVAVFDFASLYPSIIQAYNLCYCT 623
>gi|308163159|gb|EFO65519.1| DNA polymerase delta, catalytic subunit [Giardia lamblia P15]
Length = 1300
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 143/305 (46%), Gaps = 23/305 (7%)
Query: 313 NEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLERHFVSNEKELFSIFIENV-RQWDP 371
E EL F ++ +DPD+ GY I+ F + Y+ +R E+ + ++++ +
Sbjct: 309 TEGELLLAFNYLIQLFDPDLFTGYNIDGFDFNYIFKR------AEIGQVLVQSLPGSMET 362
Query: 372 DILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVI 431
D L+ ++ S Y L + +S + K+ RD ++ PGRI +
Sbjct: 363 DQLLSRILKKGSSTYASTLPRALSSPMTITVSHLQ--SKQLGKRD---TYEINCPGRISM 417
Query: 432 NLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRV 491
++ + H L+SYT ++ L+E+ + ++T + + + +T+ Y I+
Sbjct: 418 DILPNIIHNYKLRSYTLNSVCARFLNEQKDDVHYSMITPLFMQDEYGRRRITL--YCIKD 475
Query: 492 TGI-IRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSI 550
+ ++L+E+L + T E+ R+ G+ +L G Q R+ S++ R S +++
Sbjct: 476 CKLPLKLMEKLMILVNTIELCRVSGLCGSLLLYSGQQIRILSLLYRFSAAESYLIPYRMR 535
Query: 551 KQRAHMRA----PESL--PLILEPESRLYTD--PIIVLDFQSLYPSVIIAYNYCFSTCLG 602
+ E L +L P+ Y+D PI LDF SLYP++IIA+N C+ST +
Sbjct: 536 TGNGYTGGFSGDSEGLEGATVLNPKRGFYSDKQPIATLDFNSLYPTIIIAHNLCYSTMIS 595
Query: 603 RVEHL 607
+ +
Sbjct: 596 DIPDM 600
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 110 LYTD--PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHL 145
Y+D PI LDF SLYP++IIA+N C+ST + + +
Sbjct: 563 FYSDKQPIATLDFNSLYPTIIIAHNLCYSTMISDIPDM 600
>gi|27452795|gb|AAO12301.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
gi|27452810|gb|AAO12315.1| DNA polymerase [Porcine lymphotropic herpesvirus 3]
Length = 1001
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 34/328 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQEL------SRITE 407
+E ++ F +R +D +I+ GY I + Y+L R V+ N+ E I +
Sbjct: 345 SELDMLYAFCSMIRDFDIEIVTGYNIANFDFPYILHRANVI-YNMKAESYTRTKSGSIFQ 403
Query: 408 VEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
V K NT++++ G +VI+++ + + +++L +Y + + E+ S+K
Sbjct: 404 VHKPKDGNFLRSNTKVKISGLVVIDMYIISKEKLSLSNYKLNTVAKECVGEKKEDVSYKE 463
Query: 468 LTCWWE----HRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLS 523
+ ++ R L + + L+ + L++ SE+A++ I V++
Sbjct: 464 IPALFKGSANDRARLGLYCVQDSILV-----MDLLKYFMTHVEISEIAKIANIPMRRVIT 518
Query: 524 RGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQ 583
G Q RV S +L ++ ++ + Q A+ + +I P S Y P++V+DF
Sbjct: 519 DGQQIRVFSCLLASAKSRGYIL---PVSQTANFEGYQGATVI-NPLSGFYNTPVLVVDFA 574
Query: 584 SLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAF 643
SLYPS+I A+N C+ST + DL+ + + + IS V F
Sbjct: 575 SLYPSIIQAHNLCYSTLIHHE--------------DLHKHPQLKESDYETFVISSGPVHF 620
Query: 644 VDKSIRCGILPKMLQEILDTRLMVKQSM 671
V K I +L +L L R +++ +
Sbjct: 621 VKKHISESLLSNLLTTWLAKRKTIRKEL 648
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P++V+DF SLYPS+I A+N C+ST +
Sbjct: 563 FYNTPVLVVDFASLYPSIIQAHNLCYSTLI 592
>gi|435849896|ref|YP_007301837.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433663384|gb|AGB50809.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 924
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 162/355 (45%), Gaps = 33/355 (9%)
Query: 344 GYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELS 403
G E NE ++ + F VR++DPD+L G+ + Y+++R + +
Sbjct: 227 GVDKETECYDNENDMINAFFSTVREYDPDVLTGFNTDGFDTKYVVDRCKKINTESGTPVI 286
Query: 404 --RITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
+I + + R T + + GRIV ++ L+R L+ Y EN+ ++ +
Sbjct: 287 NFKIGRDNRDLNFRVFGATTSVSISGRIVADVLPLIREGFKLKRYKLENVAKELIGKEKL 346
Query: 462 LHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
+ + +W + ++ + +E+ + L+ +L + + +A++ G +V
Sbjct: 347 DVPPQEMEAYWNDPSKIHTF--IEYSRRDSELALELLLKLQLLDKYLALAQVSGRPLQDV 404
Query: 522 LSRGSQFRVESIML-RLSRLNNFVAVSPSIKQRAHMRAPESLPL---ILEPESRLYTDPI 577
++ G VE +++ R ++ +A+ P+ + R ES + +L+P+ L+ +
Sbjct: 405 INGGQTNLVEQLLMSRFREIDRLMAMKPN-DEIVEERERESNVVGADVLDPKKGLHCN-T 462
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTIS 637
+V D++SLYP++++A N C++T + + + P ++++ IS
Sbjct: 463 VVEDYKSLYPTIMMARNLCYTTVI-------IDKTTP----------------KESMIIS 499
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLLI 692
PS F+ I GI+P +L+ +LD R+ K+ MK + R L L I
Sbjct: 500 PSDGHFIKPEIFKGIIPSILEGLLDKRVATKKMMKNARDENEKRVLDATQLALKI 554
>gi|301015727|pdb|2XHB|A Chain A, Crystal Structure Of Dna Polymerase From Thermococcus
Gorgonarius In Complex With Hypoxanthine-Containing Dna
Length = 773
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + ++ YL +R LG+ + R
Sbjct: 184 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFAFAYLKKRSEKLGVKF---------ILGR 234
Query: 412 NSSRDEVKNT----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
S +++ +++ GRI +L+ ++R +NL +YT E + + + +
Sbjct: 235 EGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEE 294
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ WE L + V Y + + + + +F ++++RL G ++V +
Sbjct: 295 IAQAWETGEGLER---VARYSMEDAKVTYELGK-EFFPMEAQLSRLVGQSLWDVSRSSTG 350
Query: 528 FRVESIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
VE +LR + N +A + P ++ A R + + EPE L+ + I+ LDF+SLY
Sbjct: 351 NLVEWFLLRKAYERNELAPNKPDERELARRRESYAGGYVKEPERGLWEN-IVYLDFRSLY 409
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+II +N T L R GC + +V+ + K ++
Sbjct: 410 PSIIITHNVSPDT-LNRE-----------GCEEYDVAPQVGHKFCKDFP----------- 446
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R VK+ MK
Sbjct: 447 ----GFIPSLLGDLLEERQKVKKKMK 468
>gi|194368604|pdb|2VWK|A Chain A, Uracil Recognition In Archaeal Dna Polymerases Captured By
X-Ray Crystallography. V93q Polymerase Variant
Length = 773
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + ++ YL +R LG+ + R
Sbjct: 184 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFAFAYLKKRSEKLGVKF---------ILGR 234
Query: 412 NSSRDEVKNT----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
S +++ +++ GRI +L+ ++R +NL +YT E + + + +
Sbjct: 235 EGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEE 294
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ WE L + V Y + + + + +F ++++RL G ++V +
Sbjct: 295 IAQAWETGEGLER---VARYSMEDAKVTYELGK-EFFPMEAQLSRLVGQSLWDVSRSSTG 350
Query: 528 FRVESIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
VE +LR + N +A + P ++ A R + + EPE L+ + I+ LDF+SLY
Sbjct: 351 NLVEWFLLRKAYERNELAPNKPDERELARRRESYAGGYVKEPERGLWEN-IVYLDFRSLY 409
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+II +N T L R GC + +V+ + K ++
Sbjct: 410 PSIIITHNVSPDT-LNRE-----------GCEEYDVAPQVGHKFCKDFP----------- 446
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R VK+ MK
Sbjct: 447 ----GFIPSLLGDLLEERQKVKKKMK 468
>gi|68063595|ref|XP_673793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491898|emb|CAI02404.1| hypothetical protein PB300723.00.0 [Plasmodium berghei]
Length = 580
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 23/179 (12%)
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAH 555
RLI++L FI EMAR+ G F +L+RG Q V S + R + N++ S IK +
Sbjct: 1 RLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIXVTSQLYRKCKELNYIIPSTYIKVSNN 60
Query: 556 MRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPF 615
+ + +LEP Y +PI LDF SLYPS++IA+N C+ST + + +
Sbjct: 61 DKFEGAT--VLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKNNDEIS------- 111
Query: 616 GCIDLNVSIRSLKKLQQNLTISP--SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
DLN + ++T P + FV +++ G+LP +++E++ R VK MK
Sbjct: 112 ---DLN---------KNDITTVPGKNNFKFVKGNVKRGVLPLIVEELIRARKNVKAMMK 158
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS++IA+N C+ST +
Sbjct: 76 YIEPISTLDFASLYPSIMIAHNLCYSTLI 104
>gi|313208705|emb|CBH41133.1| DNA polymerase delta, partial [Taenia solium]
Length = 307
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
EMAR+ G+ +L RG Q +V S +LR +R + + + QR ++EP
Sbjct: 9 EMARVTGVPIAYLLKRGQQVKVVSQLLRKAREHGLLLPT----QRPGQGDEYVGGTVIEP 64
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+ Y +PI LDF SLYPS+++A+N C++T L + E + S + N+
Sbjct: 65 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISGLLANYNLG----- 118
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 119 --PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTRAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|194368602|pdb|2VWJ|A Chain A, Uracil Recognition In Archaeal Dna Polymerases Captured By
X-Ray Crystallography
Length = 773
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + ++ YL +R LG+ + R
Sbjct: 184 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFAFAYLKKRSEKLGVKF---------ILGR 234
Query: 412 NSSRDEVKNT----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
S +++ +++ GRI +L+ ++R +NL +YT E + + + +
Sbjct: 235 EGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEE 294
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ WE L + V Y + + + + +F ++++RL G ++V +
Sbjct: 295 IAQAWETGEGLER---VARYSMEDAKVTYELGK-EFFPMEAQLSRLVGQSLWDVSRSSTG 350
Query: 528 FRVESIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
VE +LR + N +A + P ++ A R + + EPE L+ + I+ LDF+SLY
Sbjct: 351 NLVEWFLLRKAYERNELAPNKPDERELARRRESYAGGYVKEPERGLWEN-IVYLDFRSLY 409
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+II +N T L R GC + +V+ + K ++
Sbjct: 410 PSIIITHNVSPDT-LNRE-----------GCEEYDVAPQVGHKFCKDFP----------- 446
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R VK+ MK
Sbjct: 447 ----GFIPSLLGDLLEERQKVKKKMK 468
>gi|343963255|gb|AEM72550.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 148/333 (44%), Gaps = 38/333 (11%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWW----EHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
+ E R + + + L+ +L +L F S +ARL I +V+
Sbjct: 504 PVLFRRDDEGRAVVGAYCVHDSVLVH-----KLFCKLLFHYEASAIARLSNISMNKVIFD 558
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q R+ + ML +R + PSI + + +LEP++ Y P+ V DF S
Sbjct: 559 GQQSRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFAS 614
Query: 585 LYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA-- 642
LYPS+I AYN C+ T ++D+ + SL++ + + +G
Sbjct: 615 LYPSIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHR 656
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
FV +R IL ++L L R V++ +K K
Sbjct: 657 FVKPHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|392858784|gb|AFM85234.1| DNA polymerase [Myotis ricketti herpesvirus 1]
Length = 998
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%), Gaps = 46/335 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++F F +R + + + GY I YL++R ++ NL++ + + EV
Sbjct: 344 SELDMFYAFFSMIRDINIEFITGYNIANFDIPYLIDRATHIYNFNLSEYTKVKSGSMFEV 403
Query: 409 EKR-NSSRDEVKN-TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K NSS+ +++ T++++ G + ++++ + + +++L +Y + + + + S+K
Sbjct: 404 HKPFNSSQGFMRSVTKVKISGIVALDMYIVCKDKLSLSNYKLDTVAQQCVGAKKEDVSYK 463
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L E R L + + L+ + L++ SE+A++ I VL
Sbjct: 464 DIPVLFRSGPEGRAKLGLYCVKDSILV-----MDLLKFFVTHIEISEIAKIAMIPVRRVL 518
Query: 523 SRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
+ G Q RV + +L S+ N++ VS S + A ++ P Y P++V+D
Sbjct: 519 TDGQQIRVFTCLLAASKKENYILPVSSSTNTDGYQGAT-----VINPHPGFYNTPVLVVD 573
Query: 582 FQSLYPSVIIAYNYCFST-----CLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTI 636
F SLYPS+I A+N C+ST L + HL SD + I
Sbjct: 574 FASLYPSIIQAHNLCYSTLIPNESLYKHNHLKSSD-------------------YETFHI 614
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
S V FV K +L K+L L+ R +K +
Sbjct: 615 SSGPVHFVKKHKSVSLLSKLLTTWLEKRKYIKNEL 649
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST-----CLGRVEHLGVSD 149
Y P++V+DF SLYPS+I A+N C+ST L + HL SD
Sbjct: 564 FYNTPVLVVDFASLYPSIIQAHNLCYSTLIPNESLYKHNHLKSSD 608
>gi|71483025|gb|AAZ32459.1| DNA polymerase family B [uncultured euryarchaeote Alv-FOS1]
Length = 781
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 56/353 (15%)
Query: 334 IGYEIETFSWGYLLER--HFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG 391
IGY + W R H E+E+ F+ + + DPD+L GY I+ GY LE
Sbjct: 177 IGYAV----WDGTTTRTGHITGEEREMLEEFVSLIIREDPDVLTGYNID----GYDLEVL 228
Query: 392 YVLGLNLNQELSRITEVEKRNSSRDEVKNTQL-QMPGRIVINLWRLLRHEVNLQSYTFEN 450
N E RI R+ + + Q ++ GR++ + W ++ E+ + T E
Sbjct: 229 SKKYAEHNIEF-RIG----RDGGKPQRIGGQFWRVHGRVIEDAWWAVKKELRPKQETLEA 283
Query: 451 IMYHVLHE-RIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSE 509
+ +L E ++ ++S K+ W + R ++ K+ + L +R++ ++ + + +
Sbjct: 284 VAQQLLGEGKMGVNSQKIDEEWKKDRENVIKYCIKDAELA-----LRILIKIGIVDKYLD 338
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
+A + +V+ G+ V+S+++R + + V ++R + LEP
Sbjct: 339 LAIVTRFPLDDVIHSGTSTWVDSLLIREADRRG-IGVPLQGQERKRGKIVGGYVHTLEPG 397
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKK 629
LY I VLDF+S+YPS+II YN CF+T ++D F
Sbjct: 398 --LY-HWICVLDFKSMYPSIIIKYNICFTT---------LTDEGGFE------------- 432
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRN 682
SP GV F+ R GI+PK+L+E+++ R +K+ M+ K +E RN
Sbjct: 433 -------SPIGVHFMRPEQREGIIPKILRELMEKRDALKKKMRTAK-TEEERN 477
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 115 IIVLDFQSLYPSVIIAYNYCFST 137
I VLDF+S+YPS+II YN CF+T
Sbjct: 402 ICVLDFKSMYPSIIIKYNICFTT 424
>gi|422294898|gb|EKU22198.1| DNA polymerase delta subunit 1 [Nannochloropsis gaditana CCMP526]
Length = 569
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 510 MARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPE 569
MAR+ G+ +L+RG Q +V S++LR R + + P++ + ++EP+
Sbjct: 1 MARVTGVPMAFLLTRGQQIKVFSMLLRKCRQSALLI--PNLPKNRQDEGTYEGATVIEPK 58
Query: 570 SRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKK 629
Y DPI LDF SLYPS++ A+N C+ST L R E + S
Sbjct: 59 KAFYQDPIATLDFASLYPSIMQAFNLCYSTLLSREEKQALPPS----------------- 101
Query: 630 LQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +PS +FV S+R GILP +L E+L R K+ M
Sbjct: 102 ---SYITTPSQESFVKPSVRKGILPLILDELLAARKRAKRDM 140
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDS 150
+ Y DPI LDF SLYPS++ A+N C+ST L R E + S
Sbjct: 58 KKAFYQDPIATLDFASLYPSIMQAFNLCYSTLLSREEKQALPPS 101
>gi|86753391|gb|ABD14869.1| PolA precursor [Thermococcus sp. GT]
Length = 1701
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + +T
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGTPKEKVYPEEITTA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WETGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P ++ A R + + EPE L+ D I+ LDF SLYPS+I
Sbjct: 355 WFLLRKAYERNEIAPNKPDERELARRRGGYAGGYVKEPERGLW-DNIVYLDFMSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + + + + K +++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDTAPQVGHKFCKDVQ--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L +LD R +K+ MK
Sbjct: 447 GFIPSLLGALLDERQKIKKRMK 468
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 253 HAISRALLKPDPAYDEVKAIFYYLYTCPPE-EDRKVGIILI---GQESELPEVRTKPIQM 308
+ I R L+ P +E+K + + + T E E+ G IL+ E E + K I +
Sbjct: 120 YLIDRGLI-PMEGDEELKMMSFDIETLYHEGEEFGTGPILMISYADEGEARVITWKKIDL 178
Query: 309 NFV---SNEKELFSTFIENVRQWDPDILIGYEIETFSWGYLLER 349
+V S EKE+ F++ V++ DPD+LI Y + F + YL +R
Sbjct: 179 PYVEVVSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKR 222
>gi|312137127|ref|YP_004004464.1| replicative DNA polymerase i [Methanothermus fervidus DSM 2088]
gi|311224846|gb|ADP77702.1| replicative DNA polymerase I [Methanothermus fervidus DSM 2088]
Length = 581
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 150/341 (43%), Gaps = 68/341 (19%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLG--LNLNQELSRITEVE 409
VSNEKE+ F E V+ +PDI+IGY + + Y+ +R LG L+L + S I V
Sbjct: 208 VSNEKEILERFKEIVKSENPDIIIGYNSDNFDFPYIRDRARKLGIKLDLGVDGSEIKFVR 267
Query: 410 KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPL-----HS 464
+ S T + G + ++L+ ++R + L +YT E + Y + E L
Sbjct: 268 RGFS-------TAAMIKGILHVDLYWVIRQYIRLDTYTLERVYYELFGEEKKLGIPGDEL 320
Query: 465 WKLLTCWW---EHRTHLYKWM--TVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
WK +W E R L+K+ E I+ LI E+ R+ G
Sbjct: 321 WK----YWDSDEKRDELFKYSLDDAESTYKIAKKILPLI---------LELTRIVGQPLS 367
Query: 520 EVLSRGSQFRVESIMLRLS-RLNNFVAVSPS---IKQRAHMRAPESLPLILEPESRLYTD 575
++ + +VE ++R + N V PS +++R R + EPE L+ D
Sbjct: 368 DIARMTTGQQVEWFLIRKAFERNELVPNKPSKAELEERKRRRPVGG--YVKEPEKGLHED 425
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
++ DF+SLYPS+II+ N T + ++++
Sbjct: 426 -LVQFDFKSLYPSIIISKNVSPDTLTN--------------------------EDKKDVY 458
Query: 636 ISP-SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
++P SG F+ K G +P ++ EILD R +K+ MK+ K
Sbjct: 459 VAPESGHKFLKKP--KGFIPSIIGEILDERAEIKEKMKKTK 497
>gi|117958105|gb|ABK59374.1| PolB precursor [Thermococcus thioreducens]
Length = 1311
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ L+R +NL +YT E + V + + +
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPLIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIALA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WESGEGLER---VARYSMEDAKVTFELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P+ ++ A R + + EPE L+ D I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYERNELAPNKPNERELARRRGGYAGGYVKEPERGLW-DNIVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + + + + K +++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDRAPQVGHKFCKDVP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L +LD R +K+ MK
Sbjct: 447 GFIPSLLGSLLDERQKIKRKMK 468
>gi|223478327|ref|YP_002582532.1| DNA polymerase family B [Thermococcus sp. AM4]
gi|214033553|gb|EEB74380.1| DNA polymerase family B [Thermococcus sp. AM4]
Length = 1699
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F+ V++ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLRIVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WESGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P K+ A R + + EPE L+ D I+ LDF+SLYPS+I
Sbjct: 355 WFLLRKAYERNELAPNKPDEKELARRRGGYAGGYVKEPERGLW-DNIVYLDFRSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ K ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCKEYDVAPEVGHKFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKRKMK 468
>gi|390960863|ref|YP_006424697.1| DNA polymerase, family B [Thermococcus sp. CL1]
gi|390519171|gb|AFL94903.1| DNA polymerase, family B [Thermococcus sp. CL1]
Length = 1471
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 151/323 (46%), Gaps = 40/323 (12%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS E+E+ F++ V++ DPD+LI Y + + YL +R LG++ L R K
Sbjct: 184 VSTEREMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGVSFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHE-RIPLHSWKLLTC 470
D +++ GRI +L+ ++RH +NL +YT E + + + + +++ ++ T
Sbjct: 242 QRIGDRF---AVEVKGRIHFDLYPVIRHTINLPTYTLEAVYEAIFGKPKEKVYAEEIATA 298
Query: 471 WWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRV 530
WE L + V Y + + + + +F ++++RL G ++V + V
Sbjct: 299 -WETGEGLER---VARYSMEDAKVTYELGK-EFFPMEAQLSRLIGQSLWDVSRSSTGNLV 353
Query: 531 ESIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSV 589
E +LR + N +A + P ++ A R + + EPE L+ D I+ LDF+SLYPS+
Sbjct: 354 EWFLLRKAYERNELAPNKPDERELARRRGGYAGGYVKEPERGLW-DNIVYLDFRSLYPSI 412
Query: 590 IIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIR 649
II +N T L R GC + + + + K ++
Sbjct: 413 IITHNVSPDT-LNRE-----------GCKEYDTAPQVGHKFCKDFP-------------- 446
Query: 650 CGILPKMLQEILDTRLMVKQSMK 672
G +P +L +L+ R +K+ MK
Sbjct: 447 -GFIPSLLGNLLEERQKIKRKMK 468
>gi|343963225|gb|AEM72530.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 774
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLMSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 599 KTGFYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|6015025|sp|P56689.1|DPOL_THEGO RecName: Full=DNA polymerase; AltName: Full=TO POL
gi|4699806|pdb|1TGO|A Chain A, Thermostable B Type Dna Polymerase From Thermococcus
Gorgonarius
Length = 773
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 46/326 (14%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + + YL +R LG+ + R
Sbjct: 184 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKF---------ILGR 234
Query: 412 NSSRDEVKNT----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
S +++ +++ GRI +L+ ++R +NL +YT E + + + +
Sbjct: 235 EGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEE 294
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ WE L + V Y + + + + +F ++++RL G ++V +
Sbjct: 295 IAQAWETGEGLER---VARYSMEDAKVTYELGK-EFFPMEAQLSRLVGQSLWDVSRSSTG 350
Query: 528 FRVESIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
VE +LR + N +A + P ++ A R + + EPE L+ + I+ LDF+SLY
Sbjct: 351 NLVEWFLLRKAYERNELAPNKPDERELARRRESYAGGYVKEPERGLWEN-IVYLDFRSLY 409
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDK 646
PS+II +N T L R GC + +V+ + K ++
Sbjct: 410 PSIIITHNVSPDT-LNRE-----------GCEEYDVAPQVGHKFCKDFP----------- 446
Query: 647 SIRCGILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R VK+ MK
Sbjct: 447 ----GFIPSLLGDLLEERQKVKKKMK 468
>gi|6469146|emb|CAB61753.1| DNA polymerase [Chlorocebus rhadinovirus 1]
Length = 600
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 145/329 (44%), Gaps = 34/329 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ + F +R +D + L GY I Y++ R V ++L + + EV
Sbjct: 207 SEYDMLTAFFAMLRDYDVEFLTGYNIANFDLPYIITRATQVYNIDLKNFTKIKTGSVFEV 266
Query: 409 EKRNSSRDEVKNTQ--LQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ +Q +++ G I+++++ R +++L Y + + L ++ S++
Sbjct: 267 HEPTGGGGGFLRSQSKVKISGIAPIDMYQVCRDKLSLSDYKLDTVAKKCLGKQKDDISYR 326
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L R + ++ ++ L V ++R+ + I +E+ARL I VL
Sbjct: 327 DIPPLFRSGAAGRAKIGRYCIIDSVL--VMDLLRMFQTHVEI---AEIARLAKIPTRRVL 381
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
+ G Q RV S +L + ++ P R ++ P Y DP++V+DF
Sbjct: 382 TDGQQIRVFSCLLEAAAKEGYILPVP----RGDATGGYQGATVISPIPGFYDDPVLVVDF 437
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA 642
SLYPS+I A+N C+ST + P G + + +R + +S V
Sbjct: 438 ASLYPSIIQAHNLCYSTLI------------PQGALPAHPELRP--DDYETFVLSEGPVH 483
Query: 643 FVDKSIRCGILPKMLQEILDTRLMVKQSM 671
FV K +R +L K+L L R +++++
Sbjct: 484 FVKKHVRESLLSKLLATWLSKRKDIRRTL 512
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y DP++V+DF SLYPS+I A+N C+ST +
Sbjct: 427 FYDDPVLVVDFASLYPSIIQAHNLCYSTLI 456
>gi|343963286|gb|AEM72570.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 782
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963269|gb|AEM72559.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 779
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963219|gb|AEM72526.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 774
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 599 KTGFYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963283|gb|AEM72568.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 783
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963272|gb|AEM72561.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 779
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963237|gb|AEM72538.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|357542187|gb|AET84947.1| DNA polymerase [Micromonas pusilla virus SP1]
Length = 940
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 355 EKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQ-ELSRIT----EVE 409
E+E+ F + +++ D DI+ G+ I Y+ +R ++ G N N +L ++ E+
Sbjct: 246 EREMLEAFQKYIQEKDVDIITGWNIFGFDLEYIYKRAFICGCNSNFFKLGKLKDQSCEIV 305
Query: 410 KRNSSRDEVKNTQLQ---MPGRIVINLWRLLRHEVNLQSYTFENI-MYHVLHERIPLHSW 465
+ S + + L+ M GR V +++ ++ L SY+ N+ ++ +++ +
Sbjct: 306 VKKLSSSALGDNLLKLFPMSGRFVFDMFHEVKKGYKLDSYSLNNVSKLYIGDQKLDMSPK 365
Query: 466 KLLTCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + E K V Y I+ T + +L++++ + EMA+ + ++ R
Sbjct: 366 EMFARYLEGDPD--KLGEVADYCIKDTLLPHKLLKKMCILLNLLEMAKATWVPLCYLVER 423
Query: 525 GSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQS 584
G Q +V S + + +R F+ P+I+ A P +L+ + Y PI LDF++
Sbjct: 424 GQQIKVFSQLTKKAREMGFMV--PTIRYGAIPEEPYEGATVLDAQKGAYYTPITALDFEA 481
Query: 585 LYPSVIIAYNYCFST 599
LYPS+++A+N C+ST
Sbjct: 482 LYPSIMMAHNLCYST 496
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI LDF++LYPS+++A+N C+ST
Sbjct: 470 YYTPITALDFEALYPSIMMAHNLCYST 496
>gi|343963246|gb|AEM72544.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963234|gb|AEM72536.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|301331662|gb|ADK70786.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963277|gb|AEM72564.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 781
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 107 RDRLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 599 KTGFYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|84998308|ref|XP_953875.1| DNA polymerase delta catalytic subunit (Pold1 ) [Theileria
annulata]
gi|65304872|emb|CAI73197.1| DNA polymerase delta catalytic subunit (Pold1 homologue), putative
[Theileria annulata]
Length = 1088
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 161/337 (47%), Gaps = 40/337 (11%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLN-QELSRITEVE--- 409
NE++L + + V DPD L GY I YLL R VL + ++L+RI V
Sbjct: 329 NEEQLLLAWNDFVIFVDPDFLTGYNIILFDLPYLLTRSSVLNIEARFKKLTRIKSVNCNF 388
Query: 410 KRNSSRDEV----KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVL-HERIPLHS 464
K + S + + +N ++ + GRI+ +++ L+R + L+SY+ + + L ++ +H
Sbjct: 389 KDSISNNNILGLYENKEINIEGRILFDVYDLVRRDYKLKSYSLNYVSFEFLKQQKEDVHY 448
Query: 465 WKLLTCWWEHRTHLYKWMT--VEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
+L + + + + ++ ++ + I +L+ ++I EM+R+ ++
Sbjct: 449 STILKLFNGNNNDRRRIASYCLKDSILPLLLINKLLLLYNYI----EMSRVTTTPIKLLI 504
Query: 523 SRGSQFRVESIMLRLSRLNNFV--AVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVL 580
+RG Q RV + + + N+V ++ K ++ + E +LEP + +PI VL
Sbjct: 505 TRGQQIRVTMQIYKQCKKMNYVIPVITGGGKNSSNENSYEG-ATVLEPLKGYHKNPISVL 563
Query: 581 DFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISP-- 638
DFQSLYPS++IA+N C+ST L +++ P
Sbjct: 564 DFQSLYPSIMIAHNICYST--------------------LLNYNNINNYRPEDVVRVPGY 603
Query: 639 SGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+ + F+ + R GILP +++ +++ R K+ M E K
Sbjct: 604 NDICFISVNKRKGILPIIVENLINERKKAKKMMNECK 640
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 111 YTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ +PI VLDFQSLYPS++IA+N C+ST
Sbjct: 556 HKNPISVLDFQSLYPSIMIAHNICYST 582
>gi|343963249|gb|AEM72546.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963231|gb|AEM72534.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963240|gb|AEM72540.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 943
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ S+K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVSYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S + RL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIVRLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|323716896|gb|ADY05320.1| DNA polymerase [Saimiri sciureus lymphocryptovirus 2]
Length = 747
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 37/350 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQ----ELSRITEV 408
+E ++ F + +R +I+ GY + W Y+L+R ++ G+N + + EV
Sbjct: 353 SELDMLYAFFQLIRDLSVEIITGYNVANFDWPYILDRARHIYGMNPSLLGKIRTGGVCEV 412
Query: 409 EKRNSSRDEV--KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
+ S T++++ G I I+++ + R +++L Y + + +L R +K
Sbjct: 413 RRPTDSGKGFLRACTKVRISGVIPIDMYAVCREKLSLSDYKLDTVAQRLLGARKEDVHYK 472
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L E R L + + L+ + L+ SE+A++ I VL
Sbjct: 473 EIPHLFRAGPEGRKRLGMYCVQDSALV-----MDLLNHFVTHVEISEIAKIANIPCRRVL 527
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L ++ F+ R + +++P S Y PI+V+DF
Sbjct: 528 DDGQQIRVFSCLLAAAQKEGFILPMLETSNRDGYQGAT----VIQPVSGFYNCPILVVDF 583
Query: 583 QSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV- 641
SLYPS+I A+N C+ST + E + D P + Q+ +S G
Sbjct: 584 ASLYPSIIQAHNLCYSTLVTPGEGNRLRDLRP-------------GEDYQSFKLSDGGTY 630
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKFSESLRNLTMLNSMLL 691
FV K + L +L+ L R +++ + E R T+L+ L
Sbjct: 631 HFVKKHVHKSFLASLLESWLAKRKAIRKLLAT---CEDPRQRTILDKQQL 677
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y PI+V+DF SLYPS+I A+N C+ST
Sbjct: 573 FYNCPILVVDFASLYPSIIQAHNLCYST 600
>gi|343963252|gb|AEM72548.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 149/330 (45%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R V + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARRE--VLIIPSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343963228|gb|AEM72532.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 1047
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 32/332 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYKFS 677
+R IL ++L L R V++ +K K S
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCKDS 691
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|340343164|emb|CCA95019.1| DNA polymerase delta, partial [Taenia taeniaeformis]
Length = 292
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 509 EMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEP 568
EMAR+ G+ +L RG Q +V S +LR S+ N + + R+ ++EP
Sbjct: 1 EMARVTGVPMAYLLKRGQQVKVISQLLRKSKENGLLLPT----HRSGQGDEYVGGTVIEP 56
Query: 569 ESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLK 628
+ Y +PI LDF SLYPS+++A+N C++T L + E + S N+
Sbjct: 57 QRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGIVHLLATYNLG----- 110
Query: 629 KLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 111 --PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 151
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 60 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 89
>gi|397619624|gb|EJK65338.1| hypothetical protein THAOC_13810 [Thalassiosira oceanica]
Length = 359
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 27/191 (14%)
Query: 496 RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQR-- 553
RL+++L + EMAR+ G+ ++SRG Q +V S++LR R N + P++K+
Sbjct: 63 RLMDKLSVLINYVEMARVTGVPVSFLISRGQQIKVFSMILRKCRDVNLLV--PTLKKSGP 120
Query: 554 AHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSF 613
A E +L+P + Y PI LDF SLYPS++ AYN C+ST +
Sbjct: 121 AGDEGYEG-ATVLDPIKQFYQVPIATLDFASLYPSIMQAYNLCYSTMVS----------- 168
Query: 614 PFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
G NV KK S +G AFV ++ GILP +L E+L R K+ MK
Sbjct: 169 --GQDAKNVDPSKYKK-------SENGHAFVHSEVKKGILPTILGELLSARKRAKRDMKN 219
Query: 674 Y--KFSESLRN 682
+F ++++N
Sbjct: 220 APNEFEKAVQN 230
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 109 RLYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ Y PI LDF SLYPS++ AYN C+ST
Sbjct: 137 QFYQVPIATLDFASLYPSIMQAYNLCYST 165
>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
Length = 932
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 162/353 (45%), Gaps = 50/353 (14%)
Query: 332 ILIGYEIETFS---WGYLLERHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLL 388
+L+ +E + W Y ++E E+ + F E +DPDI+IGY + Y+
Sbjct: 234 VLLAKPVENLNSDVWSY-------TDETEMLNKFFEIFCDYDPDIVIGYNHQDFDIPYIT 286
Query: 389 ERGYVLGLNLNQELSRITEVEKRNSSRDEVKN----TQLQMPGRIVINLWRLLRHEVNLQ 444
+R L E + I V R+ S+ + T+ +M GR+V++ L+R +L+
Sbjct: 287 DRVK----TLVSEGNSINPVVGRDGSKIGYRKFGLITRTEMKGRVVVDALPLVRRAFSLK 342
Query: 445 SYTFENIMYHVL-HERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDF 503
YT + +L E++ + ++ W + K+ V++ + LI L
Sbjct: 343 QYTLRAVSKELLSREKLDVPPLEMEEYWLDTGEKFKKF--VDYSRRDAELALELILNLRL 400
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ + +A++ G EV+ G VE+++L+ L + V + + R S
Sbjct: 401 LDKYVALAQVSGSLLQEVVDGGQTSMVETLLLKEFGLRDRVLLPKPDDGVSAERYAMSSD 460
Query: 564 L----ILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCID 619
L +LEP+ L + +++LD++SLYP++++A+N C++T + + GV+
Sbjct: 461 LKGGEVLEPKKGLLEN-VLILDYKSLYPTIMMAHNLCYTTVVTGDKSDGVT--------- 510
Query: 620 LNVSIRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
IR PSG FV + GI+P +L+++L+ R K+ M+
Sbjct: 511 ----IRP-----------PSGGEFVPSEVFKGIVPSILEDLLNKRTQTKKRMR 548
>gi|340343158|emb|CCA95016.1| DNA polymerase delta, partial [Taenia martis]
Length = 307
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ EMAR+ G+ +L RG Q +V S +LR +R + + + QR
Sbjct: 4 VANNVEMARVTGVPIAYLLKRGQQVKVISQLLRKARGHGLLLPT----QRPGQGDEYVGG 59
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP+ Y +PI LDF SLYPS+++A+N C++T L + E + S N+
Sbjct: 60 TVIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISASGGISNLLAKYNLG 118
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+ +P+G FV K IR G+LP +L+++L+ R K+ M
Sbjct: 119 -------PDDYIRTPTGAYFVKKHIRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|328786982|ref|XP_397109.3| PREDICTED: run domain Beclin-1 interacting and cystein-rich
containing protein-like [Apis mellifera]
Length = 942
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 1 LCLARGFICELCNSEEVIFPWQLSSVHRCNQCGACFHTKCH---SQLPCKRCIRMRIRRD 57
LC ARGF+CELC S++VIFPW+ S V+RC CGACFH +C +++ C RCIR+R R+
Sbjct: 878 LCQARGFVCELCYSKDVIFPWEFSKVNRCEMCGACFHNECKQNFNKIDCPRCIRLRARQI 937
Query: 58 S 58
S
Sbjct: 938 S 938
>gi|343963280|gb|AEM72566.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 947
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|343797154|gb|AEM63946.1| polymerase catalytic subunit [Suid herpesvirus 1]
gi|343797220|gb|AEM64011.1| polymerase catalytic subunit [Suid herpesvirus 1]
gi|343797290|gb|AEM64080.1| polymerase catalytic subunit [Suid herpesvirus 1]
gi|385663740|gb|AFI70795.1| UL30 [Suid herpesvirus 1]
gi|385663810|gb|AFI70864.1| UL30 [Suid herpesvirus 1]
gi|385663880|gb|AFI70933.1| UL30 [Suid herpesvirus 1]
Length = 1048
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYL---LERGYVLGLNLNQELSRITEVEK 410
+E EL F+ ++Q+ P+ GY I W ++ L Y L L+ +R +
Sbjct: 342 SEFELLLAFVTFLKQYAPEFATGYNIINFDWAFVHTKLTTVYGLALDGYGRFNRGGQFRV 401
Query: 411 RNSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
++ ++ K +++++ G + ++++ + ++ L SY + L ER +K +
Sbjct: 402 YDAGQNSFQKRSKVKINGLVSLDMYAVAADKLKLPSYKLNAVAEEALGERKLDLDYKDIP 461
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGII-----RLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + + Y ++ + ++ + + L+ S +ARL I +
Sbjct: 462 RYYAAGPR--ERGVIGRYCVQDSALVGKLFFKFLPHLEL----SAVARLANITLARAIYD 515
Query: 525 GSQFRVESIMLRLSRLNNFV------AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
G Q RV + +L+L+ FV A++ + A +LEP+S + DP++
Sbjct: 516 GQQIRVFTCLLKLAGSRGFVLPDKRRAIADEDDGGGYQGAK-----VLEPDSGFHVDPVL 570
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
VLDF SLYPS+I A+N CF+T
Sbjct: 571 VLDFASLYPSIIQAHNLCFTT 591
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ DP++VLDF SLYPS+I A+N CF+T
Sbjct: 564 FHVDPVLVLDFASLYPSIIQAHNLCFTT 591
>gi|343963258|gb|AEM72552.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 946
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|51557499|ref|YP_068333.1| DNA polymerase catalytic subunit [Suid herpesvirus 1]
gi|438895|gb|AAA74383.1| DNA polymerase, partial [Suid herpesvirus 1]
gi|40253958|tpg|DAA02153.1| TPA_exp: DNA polymerase [Suid herpesvirus 1]
Length = 1048
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYL---LERGYVLGLNLNQELSRITEVEK 410
+E EL F+ ++Q+ P+ GY I W ++ L Y L L+ +R +
Sbjct: 342 SEFELLLAFVTFLKQYAPEFATGYNIINFDWAFVHTKLTTVYGLALDGYGRFNRGGQFRV 401
Query: 411 RNSSRDEV-KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLT 469
++ ++ K +++++ G + ++++ + ++ L SY + L ER +K +
Sbjct: 402 YDAGQNSFQKRSKVKINGLVSLDMYAVAADKLKLPSYKLNAVAEEALGERKLDLDYKDIP 461
Query: 470 CWWEHRTHLYKWMTVEHYLIRVTGII-----RLIEQLDFIGRTSEMARLFGIQFYEVLSR 524
++ + + Y ++ + ++ + + L+ S +ARL I +
Sbjct: 462 RYYAAGPR--ERGVIGRYCVQDSALVGKLFFKFLPHLEL----SAVARLANITLARAIYD 515
Query: 525 GSQFRVESIMLRLSRLNNFV------AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
G Q RV + +L+L+ FV A++ + A +LEP+S + DP++
Sbjct: 516 GQQIRVFTCLLKLAGSRGFVLPDKRRAIADEDDGGGYQGAK-----VLEPDSGFHVDPVL 570
Query: 579 VLDFQSLYPSVIIAYNYCFST 599
VLDF SLYPS+I A+N CF+T
Sbjct: 571 VLDFASLYPSIIQAHNLCFTT 591
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
+ DP++VLDF SLYPS+I A+N CF+T
Sbjct: 564 FHVDPVLVLDFASLYPSIIQAHNLCFTT 591
>gi|17375628|sp|Q9HH05.1|DPOL_THEHY RecName: Full=DNA polymerase; Contains: RecName: Full=Endonuclease
PI-ThyII; AltName: Full=Thy pol-1 intein; Contains:
RecName: Full=Endonuclease PI-ThyI; AltName: Full=Thy
pol-2 intein
gi|11602745|emb|CAC18555.1| DNA polymerase and endonucleases [Thermococcus hydrothermalis]
Length = 1668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 48/327 (14%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F++ V++ DPD+LI Y + + YL +R +G+ +R
Sbjct: 151 VSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRCEKIGIKFTL---------RR 201
Query: 412 NSSRDEVKNT----QLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKL 467
+ S +++ +++ GRI +L+ ++R +NL +YT E + V +
Sbjct: 202 DGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGTPKEKVYPEE 261
Query: 468 LTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+T WE L + V Y + + + + +F ++++RL G ++V +
Sbjct: 262 ITTAWETGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTG 317
Query: 528 FRVESIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLY 586
VE +LR + N +A + P ++ A R + + EPE L+ D I+ LDF SLY
Sbjct: 318 NLVEWFLLRKAYERNEIAPNKPDERELARRRGGYAGGYVKEPERGLW-DNIVYLDFMSLY 376
Query: 587 PSVIIAYNYCFSTCLGRVEHLGVSDSFPF-GCIDLNVSIRSLKKLQQNLTISPSGVAFVD 645
PS+II +N D+F GC + + + + K +++
Sbjct: 377 PSIIITHNVS-------------PDTFNREGCKEYDTAPQVGHKFCKDVQ---------- 413
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMK 672
G +P +L +LD R +K+ MK
Sbjct: 414 -----GFIPSLLGALLDERQKIKKRMK 435
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 231 DNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPE-EDRKVGI 289
D + ++ V+ Y + + + I + L+ P +E+K + + + T E E+ G
Sbjct: 65 DEIRRHSAVVDIYEYDIPFAKRYLIDKGLI-PMEGDEELKMMSFDIETLYHEGEEFGTGP 123
Query: 290 ILI---GQESELPEVRTKPIQMNFV---SNEKELFSTFIENVRQWDPDILIGYEIETFSW 343
IL+ E E + K I + +V S EKE+ F++ V++ DPD+LI Y + F +
Sbjct: 124 ILMISYADEGEARVITWKKIDLPYVEVVSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDF 183
Query: 344 GYLLER 349
YL +R
Sbjct: 184 AYLKKR 189
>gi|323716905|gb|ADY05323.1| DNA polymerase [Ateles paniscus lymphocryptovirus 1]
Length = 748
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 143/328 (43%), Gaps = 35/328 (10%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERG-YVLGLNLNQELSRI-----TE 407
+E ++ F + +R +I+ GY + W Y+L+R ++ GLN L +I E
Sbjct: 353 SELDMIYAFFQLIRDLSVEIVTGYNVANFDWPYILDRARHIYGLN-PASLGKIRSGGVCE 411
Query: 408 VEKRNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSW 465
V + + + T++++ G + I+++ + R +++L Y + + +L R +
Sbjct: 412 VRRPHDAGKMFSRACTKVRISGVVPIDMYAVCRDKLSLSDYKLDTVAQRLLGTRKEDVHY 471
Query: 466 K----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEV 521
K L + R L + + L+ + L+ SE+A++ I V
Sbjct: 472 KEIPHLFRQGPDGRRRLGMYCVQDSALV-----MDLLNHFVIHVEISEIAKIAHIPCRRV 526
Query: 522 LSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLD 581
L G Q RV S +L ++ +F+ P R + +++P S Y P++V+D
Sbjct: 527 LDDGQQIRVFSCLLAAAQKEDFILPMPEPSDRDGYQGAT----VIQPISGFYNSPVLVVD 582
Query: 582 FQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGV 641
F SLYPS+I A+N C+ST + E + D P + ++ ++
Sbjct: 583 FASLYPSIIQAHNLCYSTLITPGEEWRLRDLRP-------------GEDYESFALTGGTF 629
Query: 642 AFVDKSIRCGILPKMLQEILDTRLMVKQ 669
FV K + L +L+ L R +++
Sbjct: 630 HFVKKHVHKSFLASLLESWLAKRKAIRK 657
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFP 152
Y P++V+DF SLYPS+I A+N C+ST + E + D P
Sbjct: 573 FYNSPVLVVDFASLYPSIIQAHNLCYSTLITPGEEWRLRDLRP 615
>gi|172044046|gb|ABI21851.2| DNA polymerase [Panthera leo gammaherpesvirus 1]
Length = 739
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 46/336 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E ++ F+ +R D + + GY I Y++ R + N + + T++ +
Sbjct: 347 SELDMLYAFLAMIRDTDIEFITGYNISNFDLPYIITRATHI---YNIPIKKYTKI--ISG 401
Query: 414 SRDEVKN------------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIP 461
S EV+ +++++ G I I+++++ + ++NL Y + H L +
Sbjct: 402 SIFEVRQPINCGSGFMRAFSKIKISGIIPIDIYQVCKDKLNLSDYKLNTVAQHCLGSKKE 461
Query: 462 LHSWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
++K L R + ++ ++ L+ + L++ +E+A+L I
Sbjct: 462 DMNYKEIPPLFRAGSVGRARVGQYCIIDSILV-----MDLLKYFMTHIEVTEIAKLAKIP 516
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPI 577
+VL G Q RV +L +R NN++ + +I++ + ++ P Y +P+
Sbjct: 517 TRQVLVDGQQIRVFCCLLEAARNNNYILPTHTIQKEGGYQGAT----VISPIPGFYNNPV 572
Query: 578 IVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTI 636
+V+DF SLYPS+I A+N C+ST + E L FP+ LK ++ I
Sbjct: 573 LVVDFASLYPSIIQAHNLCYSTMIPN-ESLAC---FPY-----------LKPEDYESFNI 617
Query: 637 SPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMK 672
+ + FV K I +L +L L R +K+ M+
Sbjct: 618 TGGTIHFVKKHITISLLSSLLTAWLTKRKKIKKEME 653
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +P++V+DF SLYPS+I A+N C+ST
Sbjct: 567 FYNNPVLVVDFASLYPSIIQAHNLCYST 594
>gi|340343162|emb|CCA95018.1| DNA polymerase delta, partial [Taenia parva]
Length = 307
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 504 IGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLP 563
+ EMAR+ G+ +L RG Q +V S +LR ++ N + + Q
Sbjct: 4 VANNVEMARVTGVPISYLLKRGQQVKVISQLLRKAKENGLLLPTHRPGQGDEYVGGT--- 60
Query: 564 LILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVS 623
++EP+ Y +PI LDF SLYPS+++A+N C++T L + E + S G I ++
Sbjct: 61 -VIEPQRGFYNEPIATLDFSSLYPSIMVAHNLCYTTLL-KPEDISAS-----GGIARFLT 113
Query: 624 IRSLKKLQQNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
I +L + +P+G FV K +R G+LP +L+++L+ R K+ M
Sbjct: 114 IYNLG--PDDYIRTPTGAYFVKKHVRKGLLPCVLEQLLEARTKAKREM 159
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y +PI LDF SLYPS+++A+N C++T L
Sbjct: 68 FYNEPIATLDFSSLYPSIMVAHNLCYTTLL 97
>gi|9631199|ref|NP_047983.1| DNA polymerase [Ateline herpesvirus 3]
gi|4019235|gb|AAC95533.1| DNA polymerase [Ateline herpesvirus 3]
Length = 1009
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 156/336 (46%), Gaps = 44/336 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E ++ F +R ++ +I+ GY I YL++R + N +LS + V+ +
Sbjct: 345 SEADMLHGFFTILRDFNVEIITGYNISNFDLPYLIDRATQI---YNIKLSDYSRVKSGSI 401
Query: 414 SR----DEVKN------TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
+ ++ N +++++ G I I+++ + + +++L +Y + + H + +
Sbjct: 402 FQVHMPKDMGNGFMRSVSKIKISGIIAIDMYIVCKDKLSLSNYKLDTVADHCIGAKKEDV 461
Query: 464 SWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFY 519
S+K L E R + ++ ++ L+ ++L+ SE+A+L I
Sbjct: 462 SYKDILPLFMSGPEGRAKIGRYCVIDSVLV-----LKLLMFFKTHVEISEIAKLAKIPTR 516
Query: 520 EVLSRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDPII 578
VL+ G Q RV S +L +R N++ VS ++ A ++ P Y + ++
Sbjct: 517 RVLTDGQQIRVFSCLLAAARAENYILPVSNNVNTDGFQGAT-----VITPIPGFYNNAVL 571
Query: 579 VLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ-QNLTIS 637
V+DF SLYPS+I A+N C+ST + H + + +P+ LK + +S
Sbjct: 572 VVDFASLYPSIIQAHNLCYSTL---IPHNSLHN-YPY-----------LKSSDYETFMLS 616
Query: 638 PSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ FV K I+ +L K+L L R ++Q + +
Sbjct: 617 SGPIHFVKKHIQTSLLSKLLTVWLSKRKAIRQKLAQ 652
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y + ++V+DF SLYPS+I A+N C+ST +
Sbjct: 565 FYNNAVLVVDFASLYPSIIQAHNLCYSTLI 594
>gi|237506873|gb|ACQ99189.1| family B DNA polymerase [Thermococcus guaymasensis]
Length = 775
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 352 VSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKR 411
VS EKE+ F+ V++ DPD+LI Y + + YL +R LG+ L R K
Sbjct: 184 VSTEKEMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGIKFT--LGRDGSEPKI 241
Query: 412 NSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCW 471
D +++ GRI +L+ ++R +NL +YT E + V + + +T
Sbjct: 242 QRMGDRF---AVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEITEA 298
Query: 472 WEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVE 531
WE L + V Y + + + + +F ++++RL G ++V + VE
Sbjct: 299 WESGEGLER---VARYSMEDAKVTYELGR-EFFPMEAQLSRLIGQSLWDVSRSSTGNLVE 354
Query: 532 SIMLRLSRLNNFVAVS-PSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVI 590
+LR + N +A + P ++ A R + + EPE L+ + I+ LDF SLYPS+I
Sbjct: 355 WFLLRKAYERNELAPNKPDERELARRRESYAGGYVKEPERGLWEN-IVYLDFMSLYPSII 413
Query: 591 IAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVAFVDKSIRC 650
I +N T L R GC + +V+ K ++
Sbjct: 414 ITHNVSPDT-LNRE-----------GCREYDVAPEVGHKFCKDFP--------------- 446
Query: 651 GILPKMLQEILDTRLMVKQSMK 672
G +P +L ++L+ R +K+ MK
Sbjct: 447 GFIPSLLGDLLEERQKIKRKMK 468
>gi|402810719|gb|AFR11403.1| DNA-dependent DNA polymerase, partial [Ursid gammaherpesvirus 1]
Length = 446
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 56/342 (16%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVE---- 409
+E +LF F VR ++ + + GY I + YL+ER + N + T+V+
Sbjct: 54 SELDLFYAFFSLVRDYNIEFVTGYNISNFDFPYLIERATNV---YNIPIKAFTKVKSGGV 110
Query: 410 ------KRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLH 463
K ++S T++++ G I I+++ + + +++L +Y + + L +
Sbjct: 111 FEVHRPKESTSSFMRAVTKVRVSGLIPIDMYTVCKDKLSLSNYKLDTVAKQCLGTQKEDV 170
Query: 464 SWKLLTCWWEH------RTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQ 517
S+K + + R LY V+ +I + + + ++ SE+A+L IQ
Sbjct: 171 SYKEIPSLFRQGPGGRSRIGLY---CVKDSIIVLDLMKYFMTHIEI----SEIAKLAKIQ 223
Query: 518 FYEVLSRGSQFRVESIMLRLSRLNNFV-AVSPSIKQRAHMRAPESLPLILEPESRLYTDP 576
VL+ G Q R+ S +L +R N++ VS S + A +++P Y P
Sbjct: 224 PRRVLTDGQQIRIFSCLLATARGENYILPVSSSDGGDGYQGA-----TVIDPVPGFYNTP 278
Query: 577 IIVLDFQSLYPSVIIAYNYCFSTC-----LGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQ 631
++V+DF SLYPS+I A+N C+ST L R HL +D
Sbjct: 279 VLVVDFASLYPSIIQAHNLCYSTLILAENLHRHPHLKNTD-------------------Y 319
Query: 632 QNLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKE 673
+ IS V FV + +L K+L+ L R +K+ +++
Sbjct: 320 ETFHISSGPVHFVKPHVTESLLGKLLKIWLAKRKAIKKQLEQ 361
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL 139
Y P++V+DF SLYPS+I A+N C+ST +
Sbjct: 274 FYNTPVLVVDFASLYPSIIQAHNLCYSTLI 303
>gi|307189794|gb|EFN74067.1| Uncharacterized protein KIAA0226 [Camponotus floridanus]
Length = 966
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Query: 1 LCLARGFICELCNSEEVIFPWQLSSVHRCNQCGACFHTKCH---SQLPCKRCIRMRIRR 56
LC ARGF+CELC S++VIFPW L V RC++CGACFH C +L C RC+R+R RR
Sbjct: 901 LCQARGFVCELCCSKDVIFPWDLLKVIRCDKCGACFHMDCKQDSGKLECPRCVRLRARR 959
>gi|156254730|gb|AAN35124.2| DNA polymerase [Pan troglodytes rhadinovirus 1]
Length = 752
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 147/336 (43%), Gaps = 46/336 (13%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNS 413
+E ++ + F+ +R ++ D + GY I Y++ R + N +L T++ R
Sbjct: 358 SEYDMLAAFLTMLRDYNVDFITGYNIANFDLPYIIARATQV---YNFKLQDFTKI--RTG 412
Query: 414 SRDEV--------------KNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHER 459
S EV +++++ G + I+++++ R +++L Y + + L ++
Sbjct: 413 SVFEVHQPRGGSEGGNFMRSQSKVKISGIVPIDMYQVCRDKLSLSDYKLDTVAKQCLGQQ 472
Query: 460 IPLHSWK----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFG 515
S+K L E R + + ++ L+ + L+ Q SE+A+L
Sbjct: 473 KEDVSYKDIPPLFKSGPEGRAKVGNYCVIDSILV-----MDLLRQFQTHVEISEIAKLAK 527
Query: 516 IQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTD 575
I VL+ G Q RV S +L + ++ P + + ++ P Y D
Sbjct: 528 IPARRVLTDGQQIRVFSCLLEAATREGYILPIPKGDAISGYQGAT----VISPLPGFYDD 583
Query: 576 PIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLT 635
P++V+DF SLYPS+I A+N C+ST + DS L++ + T
Sbjct: 584 PVLVVDFASLYPSIIQAHNLCYSTLI-------PGDS-------LHLHPHLSPDDYETFT 629
Query: 636 ISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSM 671
+S V FV K R +L ++L L R +++++
Sbjct: 630 LSGGPVHFVKKHKRESLLARLLTVWLAKRKEIRKTL 665
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFSTCL-GRVEHL 145
Y DP++V+DF SLYPS+I A+N C+ST + G HL
Sbjct: 580 FYDDPVLVVDFASLYPSIIQAHNLCYSTLIPGDSLHL 616
>gi|343963295|gb|AEM72576.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 782
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L + F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKFLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|151368513|gb|ABH05847.2| DNA polymerase [Pipistrellus nathusii rhadinovirus 1]
Length = 764
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 20/257 (7%)
Query: 354 NEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRIT-----EV 408
+E +L F +R ++ + + GY I + YL++R + ++ +R+ EV
Sbjct: 371 SELDLLYAFFAMLRDYNIEFVTGYNIANFDFPYLIDRATNVYNFCLKDFARVKTGAVFEV 430
Query: 409 EKRNSSRDEVKN--TQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWK 466
K S +++++ G + I+++ + R +++L Y + H + + ++K
Sbjct: 431 YKPKDSGSGFMRAVSKIKITGLVAIDMYIVCREKLSLSDYKLNTVAQHCMKSKKDDVTYK 490
Query: 467 ----LLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVL 522
L E R L + + L+ + L++Q SE+A+L I VL
Sbjct: 491 QIPGLFRAGPEGRGKLGAYCVQDAVLV-----MDLLKQFVTHVEISEIAKLANIPVRRVL 545
Query: 523 SRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDF 582
G Q RV S +L +R N++ P + + ++ P Y +P++V+DF
Sbjct: 546 YDGQQIRVFSCLLAAARAENYILPIPESRANEGYQGAT----VITPIPGFYDNPVLVVDF 601
Query: 583 QSLYPSVIIAYNYCFST 599
SLYPS+I A+N C+ T
Sbjct: 602 ASLYPSIIQAHNLCYCT 618
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y +P++V+DF SLYPS+I A+N C+ T
Sbjct: 591 FYDNPVLVVDFASLYPSIIQAHNLCYCT 618
>gi|343963292|gb|AEM72574.1| U38 [Elephant endotheliotropic herpesvirus 1A]
Length = 785
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 32/330 (9%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ VR + P+ + GY I Y++ R G + R+T
Sbjct: 385 ASEYELIESFLTFVRVYGPNFITGYNINAFDIPYVIGRCRYYNIQCGAFTKMKRGRMTCF 444
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ + G ++I+++R+ +V+ ++ + ++ +L E+ +K +
Sbjct: 445 KGMESFLNRCQ-CKVTISGIVIIDMYRVCMDKVSAPNHKLDTVVDMLLGEKKHSVPYKQI 503
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L + F S +ARL I +V+ G Q
Sbjct: 504 PVLF--RRDDDGRAVVGAYCVHDSVLVHKLFCKFLFHYEASAIARLSNISMNKVIFDGQQ 561
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI + + +LEP++ Y P+ V DF SLYP
Sbjct: 562 SRIFTCMLAAARREGLII--PSIDEAGEDTYQGAT--VLEPKTGFYNTPVAVFDFASLYP 617
Query: 588 SVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQNLTISPSGVA--FVD 645
S+I AYN C+ T ++D+ + SL++ + + +G FV
Sbjct: 618 SIIQAYNLCYCTL--------ITDN----------DVASLREEDVTMVTTNTGRVHRFVK 659
Query: 646 KSIRCGILPKMLQEILDTRLMVKQSMKEYK 675
+R IL ++L L R V++ +K K
Sbjct: 660 PHVRKSILSQLLTSWLAERKAVREKLKHCK 689
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 602 FYNTPVAVFDFASLYPSIIQAYNLCYCT 629
>gi|301331883|gb|ADK70918.1| U38 [Elephant endotheliotropic herpesvirus 2]
Length = 837
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 12/252 (4%)
Query: 353 SNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLER----GYVLGLNLNQELSRITEV 408
++E EL F+ + + P+ L GY I YL+ R G R+T
Sbjct: 373 ASEYELIQAFLTFFKIYGPNFLTGYNINAFDIPYLIGRCRYYNIACGAFTKMRRGRMTFF 432
Query: 409 EKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLL 468
+ S + + ++ M G ++I+++R+ +V+ ++ + I+ +L E+ S+K +
Sbjct: 433 KGMESFLNRCQ-CKVTMSGVVIIDMYRVCMDKVSAPNHKLDTIVDMLLGEKKHSVSYKQI 491
Query: 469 TCWWEHRTHLYKWMTVEHYLIRVTGII-RLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQ 527
+ R V Y + + ++ +L +L F S +ARL I V+ G Q
Sbjct: 492 PLLY--RKDDDGRAVVGAYCVHDSVLVHKLFCKLLFHYEASAIARLSNISMNRVIFDGQQ 549
Query: 528 FRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYP 587
R+ + ML +R + PSI++ + +L+P++ Y P+ V DF SLYP
Sbjct: 550 SRIYTCMLAAARKEELII--PSIEEAGEDTYQGAT--VLDPKTGFYNTPVAVFDFASLYP 605
Query: 588 SVIIAYNYCFST 599
S+I AYN C+ T
Sbjct: 606 SIIQAYNLCYCT 617
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 110 LYTDPIIVLDFQSLYPSVIIAYNYCFST 137
Y P+ V DF SLYPS+I AYN C+ T
Sbjct: 590 FYNTPVAVFDFASLYPSIIQAYNLCYCT 617
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,721,795,965
Number of Sequences: 23463169
Number of extensions: 450094145
Number of successful extensions: 1010229
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2966
Number of HSP's successfully gapped in prelim test: 600
Number of HSP's that attempted gapping in prelim test: 995889
Number of HSP's gapped (non-prelim): 10509
length of query: 696
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 546
effective length of database: 8,839,720,017
effective search space: 4826487129282
effective search space used: 4826487129282
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)