BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy593
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P02557|TBB_YEAST Tubulin beta chain OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=TUB2 PE=1 SV=2
Length = 457
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 4/58 (6%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 58
MF+RKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA++ED E+ DE GD
Sbjct: 388 MFKRKAFLHWYTSEGMDELEFSEAESNMNDLVSEYQQYQEATVEDDEEV----DENGD 441
>sp|Q8SS99|TBB_ENCCU Tubulin beta chain OS=Encephalitozoon cuniculi (strain GB-M1)
GN=TUB2 PE=1 SV=1
Length = 439
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/48 (72%), Positives = 40/48 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 48
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+IED E
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFSEAESNMNDLLSEYQQYQDATIEDAEE 435
>sp|Q4WA70|TBB_ASPFU Tubulin beta chain OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=AFUA_7G00250 PE=3
SV=1
Length = 448
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/48 (75%), Positives = 39/48 (81%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 48
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEASI D E
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLMSEYQQYQEASISDGEE 435
>sp|Q9GSR5|TBB_ENCIN Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3
SV=1
Length = 439
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 48
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A++ED E
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFSEAESNMNDLLSEYQQYQDATVEDAEE 435
>sp|Q24829|TBB_ENCHE Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1
Length = 439
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 48
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A++ED E
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFSEAESNMNDLLSEYQQYQDATVEDAEE 435
>sp|P52275|TBB2_CAEEL Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=3 SV=1
Length = 450
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 40/48 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 48
MFRRKAFLHWYT EGMDE EF EA +N+ DLI EYQQYQEA+ ED V+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVD 435
>sp|P41799|TBB_PHANO Tubulin beta chain OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=tubB PE=1 SV=2
Length = 447
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASI 430
>sp|P12458|TBB2_PHYPO Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1
Length = 454
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS++D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASVDD 432
>sp|P16040|TBB_ERYGR Tubulin beta chain OS=Erysiphe graminis subsp. hordei GN=TUB2 PE=3
SV=1
Length = 446
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASI 430
>sp|P10875|TBB_CANAX Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1
Length = 449
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDD 54
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEASI D E+ +D+
Sbjct: 388 MFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVSEYQQYQEASI-DEEELEYADE 440
>sp|P10874|TBB2_EMENI Tubulin beta-2 chain OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=tubC PE=3 SV=2
Length = 449
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA++ D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLMSEYQQYQEATVSD 432
>sp|P53375|TBB_PENDI Tubulin beta chain OS=Penicillium digitatum GN=TUB2 PE=3 SV=1
Length = 447
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDD 54
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS+ + E ++D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASVSEGEEEYLAED 441
>sp|Q6QDC9|TBB_MYCGR Tubulin beta chain OS=Mycosphaerella graminicola GN=TUB1 PE=3 SV=1
Length = 447
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASV 430
>sp|Q3KVN1|TBB_CERBT Tubulin beta chain OS=Cercospora beticola GN=TUB1 PE=3 SV=1
Length = 447
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASV 430
>sp|P41388|TBB_VENIN Tubulin beta chain OS=Venturia inaequalis PE=3 SV=1
Length = 447
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASV 430
>sp|O42786|TBB_MYCPJ Tubulin beta chain OS=Mycosphaerella pini GN=TUB1 PE=3 SV=1
Length = 447
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASV 430
>sp|P08841|TBB3_DROME Tubulin beta-3 chain OS=Drosophila melanogaster GN=betaTub60D PE=2
SV=2
Length = 454
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDE-KGD 58
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA+ +D + + +E +GD
Sbjct: 394 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEFDPEVNQEEVEGD 452
>sp|Q4QRB4|TBB3_RAT Tubulin beta-3 chain OS=Rattus norvegicus GN=Tubb3 PE=1 SV=1
Length = 450
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 58
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+ E+ E+ DDE+ +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDEESE 445
>sp|Q9ERD7|TBB3_MOUSE Tubulin beta-3 chain OS=Mus musculus GN=Tubb3 PE=1 SV=1
Length = 450
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 58
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+ E+ E+ DDE+ +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDEESE 445
>sp|Q8WZE0|TBB_USTVI Tubulin beta chain OS=Ustilago violacea PE=2 SV=1
Length = 444
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRR+AFLHWYT EGMDE EF EA AN+ DLI EY QYQEA ++D
Sbjct: 388 MFRRRAFLHWYTGEGMDEMEFSEASANMHDLIAEYTQYQEAGVDD 432
>sp|Q4R9N3|TBB_COCHE Tubulin beta chain OS=Cochliobolus heterostrophus GN=TUB1 PE=3 SV=1
Length = 447
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEAS+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEASV 430
>sp|P53376|TBB_RHYSE Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1
Length = 447
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASI 430
>sp|P53373|TBB_BOTFU Tubulin beta chain OS=Botryotinia fuckeliana GN=tubA PE=3 SV=1
Length = 447
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASI 430
>sp|Q875L2|TBB2_HYPVI Tubulin beta-2 chain OS=Hypocrea virens PE=2 SV=1
Length = 446
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIE 44
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA I+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>sp|Q00264|TBB_ASPPA Tubulin beta chain OS=Aspergillus parasiticus GN=benR PE=3 SV=1
Length = 448
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASI 430
>sp|Q2U2U3|TBB_ASPOR Tubulin beta chain OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=benA56 PE=3 SV=1
Length = 448
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASI 430
>sp|P22012|TBB_ASPFL Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1
Length = 448
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASI 430
>sp|P10653|TBB1_EMENI Tubulin beta-1 chain OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=benA PE=3 SV=1
Length = 447
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASI 430
>sp|P24637|TBB_PNECA Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1
Length = 442
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDE 55
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQY+ A +++ VE+ DDE
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYEIAGVDEEVEL---DDE 439
>sp|P09652|TBB4_CHICK Tubulin beta-4 chain OS=Gallus gallus PE=1 SV=1
Length = 449
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGDHR 60
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+ E+ E+ D+E+ +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEQG 447
Query: 61 IK 62
K
Sbjct: 448 AK 449
>sp|P07436|TBB1_PHYPO Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4
Length = 467
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+I+D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATIDD 432
>sp|P31863|TBB2_HYPRU Tubulin beta-2 chain OS=Hypocrea rufa GN=tub2 PE=3 SV=1
Length = 446
Score = 75.9 bits (185), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 36/43 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA I
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGI 430
>sp|P41742|TBB_AJECA Tubulin beta chain OS=Ajellomyces capsulatus GN=TUB2 PE=3 SV=1
Length = 445
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+ASI +
Sbjct: 389 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASISE 433
>sp|P41741|TBB_ACRCH Tubulin beta chain OS=Acremonium chrysogenum GN=TUB2 PE=3 SV=1
Length = 447
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIE 44
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A I+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGID 431
>sp|Q4HZS8|TBB_GIBZE Tubulin beta chain OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620
/ FGSC 9075 / NRRL 31084) GN=TUB2 PE=3 SV=1
Length = 446
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIE 44
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A I+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGID 431
>sp|P53374|TBB_GIBFU Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2 PE=3 SV=1
Length = 446
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIE 44
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A I+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGID 431
>sp|P05304|TBB_GIAIN Tubulin beta chain OS=Giardia intestinalis PE=2 SV=3
Length = 446
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGV 430
>sp|Q60HC2|TBB3_MACFA Tubulin beta-3 chain OS=Macaca fascicularis GN=TUBB3 PE=2 SV=1
Length = 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 58
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+ E+ E+ D+E+ +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESE 445
>sp|Q13509|TBB3_HUMAN Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2
Length = 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 58
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+ E+ E+ D+E+ +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESE 445
>sp|Q2T9S0|TBB3_BOVIN Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 SV=1
Length = 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 58
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+ E+ E+ D+E+ +
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESE 445
>sp|P17938|TBB_EPITY Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=3 SV=1
Length = 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIE 44
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A I+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGID 431
>sp|Q9NFZ7|TBB1_ECHMU Tubulin beta-1 chain OS=Echinococcus multilocularis GN=TUB-1 PE=3
SV=1
Length = 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 36/43 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA I
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGI 430
>sp|P04107|TBB_TRYBR Tubulin beta chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1
Length = 442
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+I
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATI 430
>sp|P32928|TBB1_COLGL Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3
SV=1
Length = 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A ++D
Sbjct: 389 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGMDD 433
>sp|P33127|TBB_NEOCO Tubulin beta chain OS=Neotyphodium coenophialum GN=TUB2 PE=3 SV=1
Length = 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIE 44
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A I+
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGID 431
>sp|P08562|TBB_TRYCR Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2
Length = 442
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+I
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATI 430
>sp|P05219|TBB_SCHPO Tubulin beta chain OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nda3 PE=1 SV=2
Length = 448
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 36/43 (83%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASI 43
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQEA I
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGI 430
>sp|P41387|TBB_ONCGI Tubulin beta chain OS=Onchocerca gibsoni GN=TBB PE=3 SV=1
Length = 444
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 45
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+AS +D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASADD 432
>sp|Q43695|TBB3_MAIZE Tubulin beta-3 chain OS=Zea mays GN=TUBB3 PE=2 SV=1
Length = 445
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEAS 42
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+
Sbjct: 388 MFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
>sp|Q76FS2|TBB8_ORYSJ Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2
SV=1
Length = 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 1 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEAS 42
MFRRKAFLHWYT EGMDE EF EA +N+ DL+ EYQQYQ+A+
Sbjct: 388 MFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDAT 429
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,554,542
Number of Sequences: 539616
Number of extensions: 860251
Number of successful extensions: 2675
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2286
Number of HSP's gapped (non-prelim): 394
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)