Query         psy5930
Match_columns 2426
No_of_seqs    173 out of 248
Neff          6.4 
Searched_HMMs 13730
Date          Fri Aug 16 22:10:01 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy5930.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5930hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1u6gc_ a.118.1.2 (C:) Cullin-  97.9   0.035 2.5E-06   76.0  48.3  163  727-908   517-681 (1207)
  2 d2bpta1 a.118.1.1 (A:1-861) Im  97.8   0.034 2.5E-06   72.2  43.5  579  435-1156  133-730 (861)
  3 d1b3ua_ a.118.1.2 (A:) Constan  97.5   0.082   6E-06   66.3  38.2  340  727-1142  204-553 (588)
  4 d1u6gc_ a.118.1.2 (C:) Cullin-  97.2       1 7.4E-05   60.9  67.4  156  727-908    46-206 (1207)
  5 d1b3ua_ a.118.1.2 (A:) Constan  97.0     0.1 7.3E-06   65.4  32.0  470  474-1073   84-571 (588)
  6 d1qgra_ a.118.1.1 (A:) Importi  96.6    0.67 4.9E-05   59.7  36.3  338  476-905   127-481 (876)
  7 d2vglb_ a.118.1.10 (B:) Adapti  96.4    0.13 9.8E-06   65.0  26.2  369  726-1156  118-505 (579)
  8 d1ibrb_ a.118.1.1 (B:) Importi  96.0    0.87 6.4E-05   53.5  29.3  301  474-906   124-439 (458)
  9 d1qbkb_ a.118.1.1 (B:) Karyoph  95.7    0.12 9.1E-06   68.3  21.6  160  726-909   395-554 (888)
 10 d1qbkb_ a.118.1.1 (B:) Karyoph  94.5     3.9 0.00028   53.3  31.1  115  727-852   666-780 (888)
 11 d2vgla_ a.118.1.10 (A:) Adapti  93.8     1.2 8.8E-05   55.9  22.9  362  731-1153   71-441 (584)
 12 d2vglb_ a.118.1.10 (B:) Adapti  93.6     4.3 0.00032   50.5  27.5  334  727-1111   84-439 (579)
 13 d1ibrb_ a.118.1.1 (B:) Importi  93.6     3.2 0.00023   48.4  25.0  336  727-1090   90-439 (458)
 14 d2bpta1 a.118.1.1 (A:1-861) Im  83.8      61  0.0045   40.1  46.6   94 1730-1833  350-443 (861)
 15 d1q1sc_ a.118.1.1 (C:) Importi  80.9      21  0.0016   41.0  19.8  314  727-1092   57-391 (434)
 16 d1wa5c_ a.118.1.1 (C:) Exporti  77.8   1E+02  0.0075   39.0  35.6  109  998-1107  473-601 (959)
 17 d1wa5b_ a.118.1.1 (B:) Karyoph  75.9      30  0.0022   41.0  19.4  154  727-902   205-358 (503)
 18 d1xqra1 a.118.1.21 (A:87-350)   71.7      72  0.0052   34.3  20.1  157  728-905    60-217 (264)
 19 d1q1sc_ a.118.1.1 (C:) Importi  71.4      90  0.0066   35.3  28.9  174  875-1070  100-283 (434)
 20 d1wa5b_ a.118.1.1 (B:) Karyoph  65.8      54  0.0039   38.6  18.4   91  998-1088  345-447 (503)
 21 d1xqra1 a.118.1.21 (A:87-350)   59.7      38  0.0028   36.7  14.1  171 1775-1981   33-214 (264)
 22 d2vgla_ a.118.1.10 (A:) Adapti  52.3 2.4E+02   0.017   33.8  24.6   31  727-757   139-171 (584)
 23 d1oyza_ a.118.1.16 (A:) Hypoth  50.5      53  0.0038   34.8  13.2  132  727-902    20-152 (276)
 24 d1jdha_ a.118.1.1 (A:) beta-Ca  42.3 1.8E+02   0.013   33.8  17.6  153  728-903    19-172 (529)
 25 d1elwa_ a.118.8.1 (A:) Hop {Hu  40.7      30  0.0021   32.8   7.9   78 2297-2399   17-100 (117)
 26 d1w9ca_ a.118.1.19 (A:) Export  38.0 1.8E+02   0.013   32.7  15.3   61  678-756   134-197 (321)
 27 d1hxia_ a.118.8.1 (A:) Peroxin  35.8      42   0.003   31.4   8.1   76 2297-2397   30-111 (112)
 28 d2c2la1 a.118.8.1 (A:24-224) S  33.5      67  0.0049   32.2  10.0   86 2289-2399    7-101 (201)
 29 d1jdha_ a.118.1.1 (A:) beta-Ca  28.1 4.6E+02   0.034   30.0  24.3   73  997-1070  433-511 (529)
 30 d1qgra_ a.118.1.1 (A:) Importi  26.3 5.9E+02   0.043   30.6  47.7   57 1778-1834  385-441 (876)
 31 d1wa5c_ a.118.1.1 (C:) Exporti  25.6      83   0.006   39.9  10.9  166  331-508   489-673 (959)
 32 d1hh8a_ a.118.8.1 (A:) Neutrop  23.3      59  0.0043   33.5   7.2   56 2344-2399   38-99  (192)
 33 d1xm9a1 a.118.1.24 (A:244-700)  21.2      34  0.0025   38.5   5.0   68  476-553     1-75  (457)
 34 d1fcha_ a.118.8.1 (A:) Peroxin  21.2 1.4E+02    0.01   31.9  10.4   90 2285-2399  171-269 (323)
 35 d1w3ba_ a.118.8.1 (A:) O-GlcNA  20.8 1.1E+02  0.0078   33.2   9.3   78 2297-2399  285-368 (388)

No 1  
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90  E-value=0.035  Score=75.97  Aligned_cols=163  Identities=10%  Similarity=0.083  Sum_probs=88.9

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCc--hhhhhHhHHHHHHHHHH
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYER--AWYAKLGGCYAIKFFYN  804 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~--~w~~K~gG~~gi~~l~~  804 (2426)
                      +...+..++.+....++..+..++..+........ ........+.+..+.......+...  ..-.+.+...++..++.
T Consensus       517 l~~~~~~~~~~~~~~i~~~al~~~~~l~~~l~~~~-~~~~~~~~~~~~~l~~~~~~~l~~~~~~~e~~~~al~~l~~l~~  595 (1207)
T d1u6gc_         517 LVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLD-QPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIIC  595 (1207)
T ss_dssp             THHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSS-SCCCCCCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHccccHHHHHHHHHHHHHHHHHhhhhc-cchhhhhHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence            56777888888888888877777776666432221 1111223455666666655555432  23334444444555555


Q ss_pred             hchHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcC
Q psy5930         805 TMAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNIT  884 (2426)
Q Consensus       805 ~~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~  884 (2426)
                      ..+.. +......++..++-.+.+   +.   ....|-..+..+.   .......       . ...+..++..+...+.
T Consensus       596 ~~~~~-~~~~~~~~l~~l~~~l~~---~~---~r~~a~~~l~~i~---~~~~~~~-------~-~~~l~~~~~~l~~~l~  657 (1207)
T d1u6gc_         596 NLGDN-LGSDLPNTLQIFLERLKN---EI---TRLTTVKALTLIA---GSPLKID-------L-RPVLGEGVPILASFLR  657 (1207)
T ss_dssp             HTGGG-CCTHHHHHHHHHHHHTTS---SS---HHHHHHHHHHHHT---TCSSCCC-------C-HHHHHHHHHHHHHHTT
T ss_pred             Hhhhh-hHHHHHHHHHHHHHHhcc---hh---hHHHHHHHHHHHH---Hhccchh-------H-HHHHHHHHHHHHHhcc
Confidence            54321 111223344444444433   22   1223333332222   1111111       1 1236677788888999


Q ss_pred             CCChHHHHHHHHHHHHHHHHhCCc
Q psy5930         885 LPNDLLREQSMYLLQVFAETQGKS  908 (2426)
Q Consensus       885 s~n~~VR~~aq~~L~~lae~t~~~  908 (2426)
                      +.+..+|.++..+|..+.+..+..
T Consensus       658 ~~~~~~r~~al~~L~~l~~~~~~~  681 (1207)
T d1u6gc_         658 KNQRALKLGTLSALDILIKNYSDS  681 (1207)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCCTT
T ss_pred             cchHHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999888776543


No 2  
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.81  E-value=0.034  Score=72.17  Aligned_cols=579  Identities=12%  Similarity=0.095  Sum_probs=301.0

Q ss_pred             HHHHHHHHHhhhcCccchhh----hHHhhhhhccccccccccCCcchhhHHHHHHhcC---CchhHHhhhhhhhhhhccC
Q psy5930         435 RNLLQGLNSLQSGLHKQQMK----DLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNG---SSTLISQGLRTLELCVDNL  507 (2426)
Q Consensus       435 p~lLe~Ln~Ll~~~~~~~~R----dL~VELCLTVPvRLS~LLPyL~~LM~PLV~AL~~---~~eLvsqGLRTLElcVDNL  507 (2426)
                      |.+++.|...+.+......|    .++-++|-.++-.+..+.+++.-+...++..+..   +.++...++++|--++...
T Consensus       133 peli~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~  212 (861)
T d2bpta1         133 PELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFI  212 (861)
T ss_dssp             HHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence            55556665555555444444    3567788788888888888777777777766644   3457778888887777766


Q ss_pred             CcchhhhccchHHHHHHHHHHhhcCCCCchhhHHHHHHhhccCCCcccccccCCCCccccccCCCCeEEEEecCCCcccc
Q psy5930         508 QPDFLYDHIQPVRADLMQALWRSLRSPNEQVAHVAYRVLGKFGGGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTIN  587 (2426)
Q Consensus       508 tpdfLdp~~~pV~~elm~ALw~~Lkp~~~~~~~~a~RILGKLGGrNR~~L~~p~~L~~~~~~~~~~~~~~~f~~~~~~~~  587 (2426)
                      ...+   ....+...+|+.|...++..+...-..|++.|+++....-+++.+                            
T Consensus       213 ~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~----------------------------  261 (861)
T d2bpta1         213 KNNM---EREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKP----------------------------  261 (861)
T ss_dssp             HHHH---TSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHH----------------------------
T ss_pred             hHhH---HhhhhhhHHHHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH----------------------------
Confidence            5543   234567778899999998777778889999999987543322210                            


Q ss_pred             cchhHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhcccCCCChhHHHhhhcCCCCCCCCCCCCcccccCChhHHHHHH
Q psy5930         588 LSVEKAIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSDNRSTIQKLFSHPSFGNTESSQGTMYKYADPTIRNTHQ  667 (2426)
Q Consensus       588 lpl~~~i~~A~~~l~~~~~d~~yr~~A~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  667 (2426)
                       .+...+..... ......+...|.+|.+++.++.-.....      ...........   ..      ... ....   
T Consensus       262 -~l~~~l~~l~~-~~~~~~~~~v~~~~~~~l~~l~~~~~~~------~~~~~~~~~~~---~~------~~~-~~~~---  320 (861)
T d2bpta1         262 -YMEQALYALTI-ATMKSPNDKVASMTVEFWSTICEEEIDI------AYELAQFPQSP---LQ------SYN-FALS---  320 (861)
T ss_dssp             -HHHHTHHHHHH-HHTTCSSHHHHHHHHHHHHHHHHHHHHH------HHHHHHCTTCS---CC------CCC-HHHH---
T ss_pred             -HHHHHHHHHHH-HHhcCccHHHHHHHHHHHHHHHHHHHHH------HHHHHhhhhhH---HH------HHH-HHHH---
Confidence             01112211111 1223456678888888887643221100      00000000000   00      000 0000   


Q ss_pred             HHHHHHHHHhcchhHHHhHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccCCCChHHHHHHHHHhhcCCChhhhhHHH
Q psy5930         668 NALTGIFMVYLIKELRKDSLLYTVLVVRHYTLVAITQQTGPFPLYGKSALLEGTMDPLVLIDAIAVILGHEDKELCKPGY  747 (2426)
Q Consensus       668 ~ll~~~f~a~~~~~l~~~a~~f~~~v~rhf~l~~i~~~~~~~~~~~~~~~~~~~ld~~vl~DAi~~~l~~~~~~~~~~~~  747 (2426)
                                           .+..++..     +.+.......+      .                .++....+..+.
T Consensus       321 ---------------------~l~~i~~~-----l~~~l~~~~~~------~----------------~~~~~~~~~~~~  352 (861)
T d2bpta1         321 ---------------------SIKDVVPN-----LLNLLTRQNED------P----------------EDDDWNVSMSAG  352 (861)
T ss_dssp             ---------------------HHHHHHHH-----HHHHTTCCCCC-----------------------CCCCCHHHHHHH
T ss_pred             ---------------------HHHHHHHH-----HHHHHHHhhcc------c----------------cchhHHHHHHHH
Confidence                                 01111100     00000100000      0                012233444455


Q ss_pred             HHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhc
Q psy5930         748 IALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMM  827 (2426)
Q Consensus       748 ~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~~~~wl~~~~~~ivraLlfvlk  827 (2426)
                      .++..+....    |+       .++..+...+...+..+.|..+.+++.++..+.+......+..+..+++..++-.+.
T Consensus       353 ~~l~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~  421 (861)
T d2bpta1         353 ACLQLFAQNC----GN-------HILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMN  421 (861)
T ss_dssp             HHHHHHHHHH----GG-------GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHHHHHHhhc----ch-------hhhhhhcchhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhc
Confidence            5554443321    21       345667777788888999999999999999998888777788888888888888887


Q ss_pred             CCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHhCC
Q psy5930         828 DLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLPNDLLREQSMYLLQVFAETQGK  907 (2426)
Q Consensus       828 D~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~n~~VR~~aq~~L~~lae~t~~  907 (2426)
                      |--    ..+++.|-.++..+.+.........          ..+..++..+...+.+ ++.|+..+-.++..+.+....
T Consensus       422 d~~----~~vr~~a~~~l~~l~~~~~~~~~~~----------~~~~~ll~~l~~~~~~-~~~~~~~~~~~~~~l~~~~~~  486 (861)
T d2bpta1         422 DQS----LQVKETTAWCIGRIADSVAESIDPQ----------QHLPGVVQACLIGLQD-HPKVATNCSWTIINLVEQLAE  486 (861)
T ss_dssp             CSC----HHHHHHHHHHHHHHHHHHGGGSCTT----------TTHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHSS
T ss_pred             Ccc----hhhhhHHHHHHHHHHHHhchhhhhH----------HhhhhhhHHHHhcccc-ChHHHHHHHHHHHHHHHHhhh
Confidence            743    3456667777777666543322211          2355556666555444 566666666667666666555


Q ss_pred             chhhccccchhhhhccCCCCccccccCchhhhHhhhhhhhhhcccCCC-ccccCcchhhHHHHHHHHHHhh-ccCchhhh
Q psy5930         908 SVVQVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSLTPR-LFTTDMSIHEHSSFFQEITNIC-ESSDQALM  985 (2426)
Q Consensus       908 ~v~ell~p~k~~Ll~~I~~Kpl~lRalpf~~QIG~idaitfcl~L~p~-~l~~~~~~~el~rll~E~l~La-dadD~~l~  985 (2426)
                      ...+.+.++-..++..+..... ........+....+|+..+....+. +.++-   ..+...+.+.+.-. ...+..+.
T Consensus       487 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~al~~~i~~~~~~~~~~~---~~l~~~~~~~l~~~~~~~~~~~~  562 (861)
T d2bpta1         487 ATPSPIYNFYPALVDGLIGAAN-RIDNEFNARASAFSALTTMVEYATDTVAETS---ASISTFVMDKLGQTMSVDENQLT  562 (861)
T ss_dssp             SSSCGGGGGHHHHHHHHHHHHT-CSCCGGGHHHHHHHHHHHHHHHCCGGGHHHH---HHHHHHHHHHHHHHTTSCGGGCC
T ss_pred             cccchhhHHHhhHHHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHH---HHHHHHHHHHHHHHHHHHhhhhh
Confidence            4444444444433333211100 0011233445555665554443332 22221   23333333333322 11111110


Q ss_pred             cCCCCCCccccchHHHHHHHHHHhhh-----cCCchhhHHHHHHHHhhcCCC-HHHHHHHHHHHHHHHccCCCC-hhhHH
Q psy5930         986 KLPCYKPISSLVPLRKAAMRALASWH-----YVPNCSQKIFNTLFAALERPN-PELQEAAFQAMKTFVNGSPID-LKSVY 1058 (2426)
Q Consensus       986 k~~~~k~~~~lv~LRv~ci~lL~~~~-----~~~~~~~rIi~vfFKsL~s~s-~ei~~aA~~gLk~vL~~~~~~-~e~L~ 1058 (2426)
                      .    ......-.++..+...+....     ....+...|+..+++.+...+ ..+.+.|..++..+....+.. .+-+.
T Consensus       563 ~----~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~~~~~l~  638 (861)
T d2bpta1         563 L----EDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLE  638 (861)
T ss_dssp             H----HHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHH
T ss_pred             h----hHHhHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            0    001122334555544444322     233355689999999987655 457788888887766542211 22333


Q ss_pred             HhhHHHHhhhcCCC-CCCHhHHHHHHHhhhhCCCcccHHHHHHHHHHHHHhhhhhhhhhcCCCCCCcch--hHHHHHHHh
Q psy5930        1059 EVMKPLLLTLGDYR-NLNLVTARKLSYIVQPFPSSFSEKLCEQLLVNLKNLFENIVAQKENPPKNSETE--KIIVVIIGI 1135 (2426)
Q Consensus      1059 q~LRPiL~nLsD~k-~Ltv~gLegLarLLeLL~nyFkveiG~KLLdHLk~~~e~~~~~~~~~~~~~~~~--kii~aIinI 1135 (2426)
                      +-+..++..|.|.. ......+..++.+.+-+...|+.-+ ..+++-|-.-.+        ....+.++  .++.++-.|
T Consensus       639 ~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~~~~~~~-~~i~~~L~~~l~--------~~~~~~~~k~~~~~~l~~i  709 (861)
T d2bpta1         639 TFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYS-DAMMNVLAQMIS--------NPNARRELKPAVLSVFGDI  709 (861)
T ss_dssp             HHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHHHH-HHHHHHHHHHHH--------CTTCCTTHHHHHHHHHHHH
T ss_pred             HHhhHHHHHhCCCCHHHHHHHHHHHHHHHHHhHHHhHhhH-HHHHHHHHHHhC--------CCCCCHHHHHHHHHHHHHH
Confidence            33444555566532 2334455566666666655553322 233333322111        11112233  355556666


Q ss_pred             hccCchhHHhhHHHHHHHHHH
Q psy5930        1136 FKESPAAKAQFIEPLISLILE 1156 (2426)
Q Consensus      1136 FHLLP~aa~~Fle~Lv~~Vl~ 1156 (2426)
                      ..-++++-..|++.++..+.+
T Consensus       710 ~~~~~~~~~~~l~~~~~~l~~  730 (861)
T d2bpta1         710 ASNIGADFIPYLNDIMALCVA  730 (861)
T ss_dssp             HHHHGGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            666666666778887765543


No 3  
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.46  E-value=0.082  Score=66.28  Aligned_cols=340  Identities=11%  Similarity=0.089  Sum_probs=200.8

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      ++..+...+.+++..++..+..++..+.+..    +..      .....+.+.+...|-+++|..+.+.+..+.-+...+
T Consensus       204 l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~----~~~------~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~  273 (588)
T d1b3ua_         204 IIPMFSNLASDEQDSVRLLAVEACVNIAQLL----PQE------DLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAV  273 (588)
T ss_dssp             HHHHHHHHHTCSCHHHHTTHHHHHHHHHHHS----CHH------HHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHhcCCchhhHHHHHHHHHHhhccC----CHH------HHHHHHHHHHHHhcccccHHHHHHHHHhHHHHHHHh
Confidence            5666777788889999999999888776531    221      122446677778888999999999999998888888


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP  886 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~  886 (2426)
                      +......   +++..+...++|...+    ++..|...+..+.+.+...   .       .....+..++..+..-+.++
T Consensus       274 ~~~~~~~---~l~~~l~~ll~d~~~~----vr~~a~~~l~~~~~~l~~~---~-------~~~~~~~~i~~~l~~~~~d~  336 (588)
T d1b3ua_         274 GPEITKT---DLVPAFQNLMKDCEAE----VRAAASHKVKEFCENLSAD---C-------RENVIMSQILPCIKELVSDA  336 (588)
T ss_dssp             CHHHHHH---THHHHHHHHHTCSSHH----HHHHHHHHHHHHHHTSCTT---T-------HHHHHHHTHHHHHHHHHTCS
T ss_pred             hhhhhhh---hhhHHHHHHHhccchH----HHHHHHHHHHHHHHHHhhh---h-------hhhhhHHHHHHHHHHhhcCC
Confidence            6654333   4666677777776544    4444555554444432111   1       11223556677777788999


Q ss_pred             ChHHHHHHHHHHHHHHHHhCCchh-hccccchhhhhccCCCCccccccCchhhhHhhhhhhhhhcccCCCccccCcchhh
Q psy5930         887 NDLLREQSMYLLQVFAETQGKSVV-QVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSLTPRLFTTDMSIHE  965 (2426)
Q Consensus       887 n~~VR~~aq~~L~~lae~t~~~v~-ell~p~k~~Ll~~I~~Kpl~lRalpf~~QIG~idaitfcl~L~p~~l~~~~~~~e  965 (2426)
                      +..||..+-.++..++...|.... +-+.|.-..++          +--.-..+.+.+.++......      ++  .+.
T Consensus       337 ~~~vr~~~~~~l~~~~~~~~~~~~~~~l~p~l~~~l----------~d~~~~v~~~~~~~l~~~~~~------~~--~~~  398 (588)
T d1b3ua_         337 NQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQL----------KDECPEVRLNIISNLDCVNEV------IG--IRQ  398 (588)
T ss_dssp             CHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHH----------TCSCHHHHHHHHTTCHHHHHH------SC--HHH
T ss_pred             ChHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHH----------HhhhhhhhhHHHHHHHHHHhh------cc--hhh
Confidence            999999999999888887774321 11112111111          111123344444433322111      00  011


Q ss_pred             HHH-HHHHHHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHh---hhcCCchhhHHHHHHHHhhcCCCHHHHHHHHH
Q psy5930         966 HSS-FFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALAS---WHYVPNCSQKIFNTLFAALERPNPELQEAAFQ 1041 (2426)
Q Consensus       966 l~r-ll~E~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~---~~~~~~~~~rIi~vfFKsL~s~s~ei~~aA~~ 1041 (2426)
                      +.. ++.....+.+.++.               ..|.++++.+..   ......+...+...+++.|..++.+|.++|-.
T Consensus       399 ~~~~ll~~l~~~~~d~~~---------------~~r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~  463 (588)
T d1b3ua_         399 LSQSLLPAIVELAEDAKW---------------RVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATS  463 (588)
T ss_dssp             HHHHHHHHHHHHHTCSSH---------------HHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHhcccH---------------HHHHHHHHHHHHHHHHcChHhHHHHHHHHHHhhccCCchhHHHHHHH
Confidence            111 22222222221111               367777776553   33344456688899999999999999999999


Q ss_pred             HHHHHHccCCCChhhHHHhhHHHHhhhcCCCCCC--HhHHHHHHHhhhhCCC-cccHHHHHHHHHHHHHhhhhhhhhhcC
Q psy5930        1042 AMKTFVNGSPIDLKSVYEVMKPLLLTLGDYRNLN--LVTARKLSYIVQPFPS-SFSEKLCEQLLVNLKNLFENIVAQKEN 1118 (2426)
Q Consensus      1042 gLk~vL~~~~~~~e~L~q~LRPiL~nLsD~k~Lt--v~gLegLarLLeLL~n-yFkveiG~KLLdHLk~~~e~~~~~~~~ 1118 (2426)
                      +|...++..+  ++.....+-|.+.++..+++-.  ...+..++.+.+-++. +|.    +.++..+.+.+..       
T Consensus       464 ~L~~l~~~~~--~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~~~----~~ilp~ll~~~~D-------  530 (588)
T d1b3ua_         464 NLKKLVEKFG--KEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT----KHMLPTVLRMAGD-------  530 (588)
T ss_dssp             HHHHHHHHHC--HHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHH----HHTHHHHHHGGGC-------
T ss_pred             HHHHHHHHhC--cHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcChHHHH----HHHHHHHHHHcCC-------
Confidence            9999876533  4555666778888877665422  3455666666554332 221    3344444444321       


Q ss_pred             CCCCCcchhH--HHHHHHhhccCchh
Q psy5930        1119 PPKNSETEKI--IVVIIGIFKESPAA 1142 (2426)
Q Consensus      1119 ~~~~~~~~ki--i~aIinIFHLLP~a 1142 (2426)
                         ..++++.  +.++-.|++.+++.
T Consensus       531 ---~v~nVR~~a~~~l~~i~~~~~~~  553 (588)
T d1b3ua_         531 ---PVANVRFNVAKSLQKIGPILDNS  553 (588)
T ss_dssp             ---SCHHHHHHHHHHHHHHGGGSCHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHcCcH
Confidence               1123443  44588899988864


No 4  
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.18  E-value=1  Score=60.88  Aligned_cols=156  Identities=10%  Similarity=0.064  Sum_probs=107.0

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      ++++++.+|.+.+++++..|..++..+....           .-+.+..+.+.+|...-+..+..+.+.+.+++.++..+
T Consensus        46 i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~-----------~~~~~~~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l  114 (1207)
T d1u6gc_          46 VVKMILKLLEDKNGEVQNLAVKCLGPLVSKV-----------KEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGEL  114 (1207)
T ss_dssp             HHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS-----------CHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHHHHHHHHhC-----------cHhhHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHhc
Confidence            8999999999999999999999998775421           11345677888888888888999999999999999988


Q ss_pred             hH-H----HHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhh
Q psy5930         807 AI-K----WVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTR  881 (2426)
Q Consensus       807 ~~-~----wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  881 (2426)
                      +. .    ....-...++.-+.-.+...   -...+...|-+.+..+++..-....+            ....++..++.
T Consensus       115 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~v~~~al~~l~~l~~~~g~~l~~------------~~~~il~~l~~  179 (1207)
T d1u6gc_         115 PPASSGSALAANVCKKITGRLTSAIAKQ---EDVSVQLEALDIMADMLSRQGGLLVN------------FHPSILTCLLP  179 (1207)
T ss_dssp             C-----CCTHHHHHHHHHHHHHHHHSCC---SCHHHHHHHHHHHHHHHHHTCSSCTT------------THHHHHHHHGG
T ss_pred             ccccccchhHHHHHHHHHHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHhhHhhHH------------HHHHHHHHHHH
Confidence            53 1    11122222333333333222   12234556667776776654322211            25567888999


Q ss_pred             hcCCCChHHHHHHHHHHHHHHHHhCCc
Q psy5930         882 NITLPNDLLREQSMYLLQVFAETQGKS  908 (2426)
Q Consensus       882 eL~s~n~~VR~~aq~~L~~lae~t~~~  908 (2426)
                      .+.+++..||+.|..||..++...+..
T Consensus       180 ~l~~~~~~vR~~A~~~l~~l~~~~~~~  206 (1207)
T d1u6gc_         180 QLTSPRLAVRKRTIIALGHLVMSCGNI  206 (1207)
T ss_dssp             GGGCSSHHHHHHHHHHHHHHTTTC---
T ss_pred             HhCCCCHHHHHHHHHHHHHHHHHCCHH
Confidence            999999999999999999998776643


No 5  
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03  E-value=0.1  Score=65.43  Aligned_cols=470  Identities=11%  Similarity=0.051  Sum_probs=251.5

Q ss_pred             CcchhhHHHHHHhcCCch-hHHhhhhhhhhhhccCCcchhhhccchHHHHHHHHHHhhcCCCCchhhHHHHHHhhccCCC
Q psy5930         474 YLPMLMDPLVSALNGSST-LISQGLRTLELCVDNLQPDFLYDHIQPVRADLMQALWRSLRSPNEQVAHVAYRVLGKFGGG  552 (2426)
Q Consensus       474 yL~~LM~PLV~AL~~~~e-LvsqGLRTLElcVDNLtpdfLdp~~~pV~~elm~ALw~~Lkp~~~~~~~~a~RILGKLGGr  552 (2426)
                      |...|+.||...+..... .-..|..+|.-.+..++++.+..++.|++..|..       +.....-..|..++|.+..+
T Consensus        84 ~~~~ll~~l~~l~~~~~~~Vr~~a~~~l~~i~~~~~~~~~~~~l~p~i~~L~~-------~~~~~~r~~a~~ll~~~~~~  156 (588)
T d1b3ua_          84 YVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAG-------GDWFTSRTSACGLFSVCYPR  156 (588)
T ss_dssp             GGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHT-------CSSHHHHHHHGGGHHHHTTT
T ss_pred             HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-------ccchHHHHHHHHHHHHHHHH
Confidence            677888888777766443 4478899999999999999988888887766542       33333455566677766421


Q ss_pred             cccccccCCCCccccccCCCCeEEEEecCCCcccccchhHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhcccCCCC-
Q psy5930         553 NRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTINLSVEKAIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSDN-  631 (2426)
Q Consensus       553 NR~~L~~p~~L~~~~~~~~~~~~~~~f~~~~~~~~lpl~~~i~~A~~~l~~~~~d~~yr~~A~~~l~~~l~~~l~~~~~-  631 (2426)
                                ..                 .  .   -....+....+.+.  +.+...|+.|-..+..+.-. .+.+.. 
T Consensus       157 ----------~~-----------------~--~---~~~~l~~~~~~l~~--D~~~~VR~~a~~~l~~~~~~-~~~~~~~  201 (588)
T d1b3ua_         157 ----------VS-----------------S--A---VKAELRQYFRNLCS--DDTPMVRRAAASKLGEFAKV-LELDNVK  201 (588)
T ss_dssp             ----------SC-----------------H--H---HHHHHHHHHHHHHT--CSCHHHHHHHHHHHHHHHHT-SCHHHHH
T ss_pred             ----------hh-----------------H--H---HHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHH-hcHHHHH
Confidence                      00                 0  0   00123444455554  34566678777766653321 111000 


Q ss_pred             ---hhHHHhhhcCCCCCCCCCCCCcccccCChhHHHHHHHHHHHHHHHhcchhHHHhHHHHHHHH-------HHHHHHHH
Q psy5930         632 ---RSTIQKLFSHPSFGNTESSQGTMYKYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLV-------VRHYTLVA  701 (2426)
Q Consensus       632 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~f~a~~~~~l~~~a~~f~~~v-------~rhf~l~~  701 (2426)
                         ...+..+.++.                +...|..-...+..+......++......+.+...       +|..+.-.
T Consensus       202 ~~l~~~l~~l~~d~----------------~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~  265 (588)
T d1b3ua_         202 SEIIPMFSNLASDE----------------QDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADK  265 (588)
T ss_dssp             HTHHHHHHHHHTCS----------------CHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCC----------------chhhHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccccHHHHHHHHHh
Confidence               01122222221                11112222222222222222122222222222221       23332222


Q ss_pred             HHhhcCCCCCCcccccccCCCChHHHHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHH
Q psy5930         702 ITQQTGPFPLYGKSALLEGTMDPLVLIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMC  781 (2426)
Q Consensus       702 i~~~~~~~~~~~~~~~~~~~ld~~vl~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~  781 (2426)
                      +++-.....      .   ......++..+...+.+.+++++..+..++..+++..    +...  ..-++++.+...+.
T Consensus       266 l~~l~~~~~------~---~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l----~~~~--~~~~~~~~i~~~l~  330 (588)
T d1b3ua_         266 FTELQKAVG------P---EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL----SADC--RENVIMSQILPCIK  330 (588)
T ss_dssp             HHHHHHHHC------H---HHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTS----CTTT--HHHHHHHTHHHHHH
T ss_pred             HHHHHHHhh------h---hhhhhhhhHHHHHHHhccchHHHHHHHHHHHHHHHHH----hhhh--hhhhhHHHHHHHHH
Confidence            221110000      0   0112237888899999999999999999998887632    2211  12346678899999


Q ss_pred             HhccCchhhhhHhHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCc
Q psy5930         782 NLCYERAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVD  861 (2426)
Q Consensus       782 ~~Cy~~~w~~K~gG~~gi~~l~~~~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~  861 (2426)
                      ..+-+..|..|...+..+..+...++..=.   .-.++..+.-.++|-..++..    .+-..+..+.....        
T Consensus       331 ~~~~d~~~~vr~~~~~~l~~~~~~~~~~~~---~~~l~p~l~~~l~d~~~~v~~----~~~~~l~~~~~~~~--------  395 (588)
T d1b3ua_         331 ELVSDANQHVKSALASVIMGLSPILGKDNT---IEHLLPLFLAQLKDECPEVRL----NIISNLDCVNEVIG--------  395 (588)
T ss_dssp             HHHTCSCHHHHHHHHTTGGGGHHHHCHHHH---HHHTHHHHHHHHTCSCHHHHH----HHHTTCHHHHHHSC--------
T ss_pred             HhhcCCChHHHHHHHHHHhhhhhccchhHH---HHHHHHHHHHHHHhhhhhhhh----HHHHHHHHHHhhcc--------
Confidence            999999999999988888877776654222   233455556666775444333    33333333332210        


Q ss_pred             hhhhhhhhhhHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHhCCchh-hccccchhhhh-ccCCCCccccccCchhhh
Q psy5930         862 AETLTVQSKALSEVTNELTRNITLPNDLLREQSMYLLQVFAETQGKSVV-QVMEPHKDVLA-DIIPPKKLLIRNHSANAQ  939 (2426)
Q Consensus       862 ~~~~~~~~~~~~~~~~~lv~eL~s~n~~VR~~aq~~L~~lae~t~~~v~-ell~p~k~~Ll-~~I~~Kpl~lRalpf~~Q  939 (2426)
                            .......++..+..-+.+++..||+++-+++..++...|.+.. +.+.|.-..++ ++.           ....
T Consensus       396 ------~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~-----------~~VR  458 (588)
T d1b3ua_         396 ------IRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV-----------YAIR  458 (588)
T ss_dssp             ------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSS-----------HHHH
T ss_pred             ------hhhhhhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcChHhHHHHHHHHHHhhccCCc-----------hhHH
Confidence                  0112344566666777899999999999999999988774331 11111111110 110           1111


Q ss_pred             HhhhhhhhhhcccCCCccccCcchhh-HHHHHHHHHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHhhh---cCCc
Q psy5930         940 IGLMEGNTFCQSLTPRLFTTDMSIHE-HSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASWH---YVPN 1015 (2426)
Q Consensus       940 IG~idaitfcl~L~p~~l~~~~~~~e-l~rll~E~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~~~---~~~~ 1015 (2426)
                      -.-..++.-...      .+..  +. ...++.....+...        +.       -..|.+|+..+....   ....
T Consensus       459 ~~A~~~L~~l~~------~~~~--~~~~~~i~~~l~~~~~~--------~~-------~~~R~~~~~~l~~l~~~~~~~~  515 (588)
T d1b3ua_         459 EAATSNLKKLVE------KFGK--EWAHATIIPKVLAMSGD--------PN-------YLHRMTTLFCINVLSEVCGQDI  515 (588)
T ss_dssp             HHHHHHHHHHHH------HHCH--HHHHHHTHHHHHHTTTC--------SC-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH------HhCc--HHHHHHHHHHHHHHhcC--------CC-------HHHHHHHHHHHHHHHHHcChHH
Confidence            111111111100      0010  00 01111111222211        11       125777777665433   2233


Q ss_pred             hhhHHHHHHHHhhcCCCHHHHHHHHHHHHHHHccCCCChhhHHHhhHHHHhhhcCCCC
Q psy5930        1016 CSQKIFNTLFAALERPNPELQEAAFQAMKTFVNGSPIDLKSVYEVMKPLLLTLGDYRN 1073 (2426)
Q Consensus      1016 ~~~rIi~vfFKsL~s~s~ei~~aA~~gLk~vL~~~~~~~e~L~q~LRPiL~nLsD~k~ 1073 (2426)
                      +.+.++..+.+.+..+.+.|..+|-.+|..+...  ..++.+++.+.|+|..|.+...
T Consensus       516 ~~~~ilp~ll~~~~D~v~nVR~~a~~~l~~i~~~--~~~~~~~~~i~~~l~~L~~D~d  571 (588)
T d1b3ua_         516 TTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPI--LDNSTLQSEVKPILEKLTQDQD  571 (588)
T ss_dssp             HHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGG--SCHHHHHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH--cCcHhHHHHHHHHHHHHcCCCC
Confidence            5668888999999999999999999999987433  3556777779999999986654


No 6  
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.63  E-value=0.67  Score=59.74  Aligned_cols=338  Identities=12%  Similarity=0.103  Sum_probs=185.4

Q ss_pred             chhhHHHHHHhcC---CchhHHhhhhhhhhhhccCCcchhhhccchHHHHHHHHHHhhcC-C-CCchhhHHHHHHhhccC
Q psy5930         476 PMLMDPLVSALNG---SSTLISQGLRTLELCVDNLQPDFLYDHIQPVRADLMQALWRSLR-S-PNEQVAHVAYRVLGKFG  550 (2426)
Q Consensus       476 ~~LM~PLV~AL~~---~~eLvsqGLRTLElcVDNLtpdfLdp~~~pV~~elm~ALw~~Lk-p-~~~~~~~~a~RILGKLG  550 (2426)
                      |=|++=|+..+..   +..+..-||++|...+.++.++.+.++...++..+.+    .+. + ++......|++.++.+.
T Consensus       127 peli~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~----~l~~~~~~~~v~~~a~~~l~~~~  202 (876)
T d1qgra_         127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQ----GMRKEEPSNNVKLAATNALLNSL  202 (876)
T ss_dssp             TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHH----HHSTTCSCHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH----HHcCcCccHHHHHHHHHHHHHHH
Confidence            3344555555533   2346667899999988888888877766555555544    443 2 23447788888887765


Q ss_pred             CCcccccccCCCCccccccCCCCeEEEEecCCCcccccchhHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhcccCCC
Q psy5930         551 GGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTINLSVEKAIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSD  630 (2426)
Q Consensus       551 GrNR~~L~~p~~L~~~~~~~~~~~~~~~f~~~~~~~~lpl~~~i~~A~~~l~~~~~d~~yr~~A~~~l~~~l~~~l~~~~  630 (2426)
                      +.......                        .   ..-.+-.++.-...+.  ..|...|+.|++.+..++-..-..- 
T Consensus       203 ~~~~~~~~------------------------~---~~~~~~i~~~l~~~~~--~~~~~v~~~~~~~l~~l~~~~~~~~-  252 (876)
T d1qgra_         203 EFTKANFD------------------------K---ESERHFIMQVVCEATQ--CPDTRVRVAALQNLVKIMSLYYQYM-  252 (876)
T ss_dssp             GGCHHHHT------------------------S---HHHHHHHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHSGGGC-
T ss_pred             HHhhhhhh------------------------H---HHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHhHHHH-
Confidence            43221110                        0   0000112333333343  3566778899988876543221100 


Q ss_pred             ChhHHHhhhcCCCCCCCCCCCCcccccCChhHHHHHHHHHHHHHHHhcchhHHHhHHHHHHHHHHHHHHHHHH--hh---
Q psy5930         631 NRSTIQKLFSHPSFGNTESSQGTMYKYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLVVRHYTLVAIT--QQ---  705 (2426)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~f~a~~~~~l~~~a~~f~~~v~rhf~l~~i~--~~---  705 (2426)
                           ...                       .......++.. ..-...++.+..+..|...++....-+...  +.   
T Consensus       253 -----~~~-----------------------~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  303 (876)
T d1qgra_         253 -----ETY-----------------------MGPALFAITIE-AMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQ  303 (876)
T ss_dssp             -----HHH-----------------------HTTTHHHHHHH-HHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHH-----------------------HHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence                 000                       00011111111 122344566677777777777654433221  11   


Q ss_pred             cCCCCCCcccccccCCCChHHHHHHHHHhhcCC-------ChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHH
Q psy5930         706 TGPFPLYGKSALLEGTMDPLVLIDAIAVILGHE-------DKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAE  778 (2426)
Q Consensus       706 ~~~~~~~~~~~~~~~~ld~~vl~DAi~~~l~~~-------~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~  778 (2426)
                      ........ .....  .--..+++-+...+...       ...++.++..++..+....    |+       .++..+.+
T Consensus       304 ~~~~~~~~-~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~----~~-------~~~~~~~~  369 (876)
T d1qgra_         304 GRPPEHTS-KFYAK--GALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCC----ED-------DIVPHVLP  369 (876)
T ss_dssp             SSCCSSCC-CCHHH--HHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHH----GG-------GGHHHHHH
T ss_pred             hhhHHHHH-HHHHH--HHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHh----hh-------hhhhhhHH
Confidence            11000000 00000  00011334444444332       3346677777777665532    21       34566777


Q ss_pred             HHHHhccCchhhhhHhHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCC
Q psy5930         779 RMCNLCYERAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKE  858 (2426)
Q Consensus       779 rf~~~Cy~~~w~~K~gG~~gi~~l~~~~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~  858 (2426)
                      -+........|..|.|++.++..+.+.....-+..+...++..++-.+.|--    ..++..|-.++..+.+........
T Consensus       370 ~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~----~~vr~~a~~~l~~~~~~~~~~~~~  445 (876)
T d1qgra_         370 FIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPS----VVVRDTAAWTVGRICELLPEAAIN  445 (876)
T ss_dssp             HHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSS----HHHHHHHHHHHHHHHHHCGGGTSS
T ss_pred             HHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCCc----cHHHHHHHHHHHHHHHHcchhhhh
Confidence            7788888999999999999998888777777778888889999988887743    334555555665555443322111


Q ss_pred             CCchhhhhhhhhhHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHh
Q psy5930         859 PVDAETLTVQSKALSEVTNELTRNITLPNDLLREQSMYLLQVFAETQ  905 (2426)
Q Consensus       859 ~~~~~~~~~~~~~~~~~~~~lv~eL~s~n~~VR~~aq~~L~~lae~t  905 (2426)
                                ...+..++..+...+ +.++.||..+-.++..+.+..
T Consensus       446 ----------~~~~~~~~~~l~~~l-~~~~~v~~~~~~~l~~l~~~~  481 (876)
T d1qgra_         446 ----------DVYLAPLLQCLIEGL-SAEPRVASNVCWAFSSLAEAA  481 (876)
T ss_dssp             ----------TTTHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHH
Confidence                      123555565565555 457889998888888777654


No 7  
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39  E-value=0.13  Score=65.02  Aligned_cols=369  Identities=12%  Similarity=0.140  Sum_probs=198.7

Q ss_pred             HHHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHh
Q psy5930         726 VLIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNT  805 (2426)
Q Consensus       726 vl~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~  805 (2426)
                      .++..|..+|.+.++.+|+.|..++..+++.      ..+..    ....+.+.+..+..++....+.+++.++..+.+.
T Consensus       118 ~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~------~p~~~----~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~  187 (579)
T d2vglb_         118 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDI------NAQMV----EDQGFLDSLRDLIADSNPMVVANAVAALSEISES  187 (579)
T ss_dssp             HHHHHHHHHSSCSCHHHHHHHHHHHHHHHHS------SCCCH----HHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHHHHhcc------Chhhh----hhhhHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence            4788889999999999999999999888762      11111    1234667778888899999999999999888765


Q ss_pred             chHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCC
Q psy5930         806 MAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITL  885 (2426)
Q Consensus       806 ~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s  885 (2426)
                      -+...+.......++.|+-.+.+..+.        .+..+..++......   .         ......++..+..-|.|
T Consensus       188 ~~~~~~~~l~~~~i~~Ll~~l~~~~~~--------~q~~il~~L~~~~~~---~---------~~~~~~li~~l~~~L~~  247 (579)
T d2vglb_         188 HPNSNLLDLNPQNINKLLTALNECTEW--------GQIFILDCLSNYNPK---D---------DREAQSICERVTPRLSH  247 (579)
T ss_dssp             CCSCCSCCCHHHHHHHHHHHHHHCCHH--------HHHHHHHHHHTSCCC---S---------HHHHHHHHHHHTTCSCS
T ss_pred             CccchhHHhhHHHHHHHHhccCCCCHH--------HHHHHHHHHHHhCCC---C---------HHHHHHHHHHHHHHHcC
Confidence            543322222234455555555443322        122222333222111   1         12245578888889999


Q ss_pred             CChHHHHHHHHHHHHHHHHhCC--c-hhhccccchhhhhccCCCCccccccCchhhhHhhhhhhhhhcccCCCccc----
Q psy5930         886 PNDLLREQSMYLLQVFAETQGK--S-VVQVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSLTPRLFT----  958 (2426)
Q Consensus       886 ~n~~VR~~aq~~L~~lae~t~~--~-v~ell~p~k~~Ll~~I~~Kpl~lRalpf~~QIG~idaitfcl~L~p~~l~----  958 (2426)
                      .|+.||..|-+++-.+.+....  . ...++......+.... .+       +-.+|.-.++++.-...-.|.++.    
T Consensus       248 ~n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~L~-s~-------~~ei~y~aL~~i~~l~~~~p~~l~~~~~  319 (579)
T d2vglb_         248 ANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLL-SG-------EPEVQYVALRNINLIVQKRPEILKQEIK  319 (579)
T ss_dssp             STTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHHTHHHHHHHT-TS-------CHHHHHHHHHHHHHHHHHCCSTTTTCTT
T ss_pred             chHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHhhHHHHHHh-cC-------CchHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            9999998877766544332211  0 1111111111111100 11       223555555555554444555442    


Q ss_pred             -----cCcchhhHHHH-HHHHHHhhccCchh--hhcCCCCCCccccchHHHHHHHHHH-hhhcCCchhhHHHHHHHHhhc
Q psy5930         959 -----TDMSIHEHSSF-FQEITNICESSDQA--LMKLPCYKPISSLVPLRKAAMRALA-SWHYVPNCSQKIFNTLFAALE 1029 (2426)
Q Consensus       959 -----~~~~~~el~rl-l~E~l~LadadD~~--l~k~~~~k~~~~lv~LRv~ci~lL~-~~~~~~~~~~rIi~vfFKsL~ 1029 (2426)
                           ++++. ..++. +.=+..+|+.+...  +...-+|-+... ...|..+++++. .|...++...+++.++.+-+.
T Consensus       320 ~~~~~~~d~~-~ik~~~L~iL~~l~~~~n~~~Il~eL~~y~~~~d-~~~~~~ai~aI~~la~~~~~~~~~~i~~Ll~ll~  397 (579)
T d2vglb_         320 VFFVKYNDPI-YVKLEKLDIMIRLASQANIAQVLAELKEYATEVD-VDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ  397 (579)
T ss_dssp             TTSCCTTSCH-HHHHHHHHHHHHTCCSSTHHHHHHHHHHHTTSSC-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCChH-HHHHHHHHHHHHHcChhhHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHh
Confidence                 23221 22222 22223455444322  111112222111 357777888776 445677777899999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHccCCCChhhHHHhhHHHHhhhcCCCCCCHhHHHHHHHhhhhCCCccc-HHHHHHHHHHHHHh
Q psy5930        1030 RPNPELQEAAFQAMKTFVNGSPIDLKSVYEVMKPLLLTLGDYRNLNLVTARKLSYIVQPFPSSFS-EKLCEQLLVNLKNL 1108 (2426)
Q Consensus      1030 s~s~ei~~aA~~gLk~vL~~~~~~~e~L~q~LRPiL~nLsD~k~Ltv~gLegLarLLeLL~nyFk-veiG~KLLdHLk~~ 1108 (2426)
                      .+...+++.|-..+++.+....-.-+.+   +..+..++.+   ++-|  +..+...-++..|=. .+-...+   |+.+
T Consensus       398 ~~~~~v~~e~i~~i~~i~~~~p~~~~~i---i~~L~~~l~~---~~~~--~~~~~~iwilGEy~~~i~~~~~l---l~~l  466 (579)
T d2vglb_         398 TKVNYVVQEAIVVIRDIFRKYPNKYESI---IATLCENLDS---LDEP--DARAAMIWIVGEYAERIDNADEL---LESF  466 (579)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSCSSCCTT---HHHHHHTTTT---CCSH--HHHHHHHHHHHTTCTTCTTHHHH---HHHH
T ss_pred             CCchhHHHHHHHHHHHHHHhChHHHHHH---HHHHHHHHHh---cCcH--HHHHHHHHHHhCcccccccHHHH---HHHH
Confidence            9999999999999999986643322222   2233333322   2222  223333333333311 0001122   2222


Q ss_pred             hhhhhhhhcCCCCCCcch--hHHHHHHHhhccCchhHHhhHHHHHHHHHH
Q psy5930        1109 FENIVAQKENPPKNSETE--KIIVVIIGIFKESPAAKAQFIEPLISLILE 1156 (2426)
Q Consensus      1109 ~e~~~~~~~~~~~~~~~~--kii~aIinIFHLLP~aa~~Fle~Lv~~Vl~ 1156 (2426)
                      .+       .-..++.++  .++.|++-+|.--|+..    ++++..|++
T Consensus       467 ~~-------~f~~e~~~vq~~iLta~~Kl~~~~p~~~----~~~~~~vl~  505 (579)
T d2vglb_         467 LE-------GFHDESTQVQLTLLTAIVKLFLKKPSET----QELVQQVLS  505 (579)
T ss_dssp             ST-------TCSSSCHHHHHHHHHHHHHHHTTCCSTT----HHHHHHHHH
T ss_pred             HH-------hhhhCCHHHHHHHHHHHHHHHhcCcHHH----HHHHHHHHh
Confidence            21       112233344  58899999999999753    566777765


No 8  
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.98  E-value=0.87  Score=53.54  Aligned_cols=301  Identities=12%  Similarity=0.088  Sum_probs=166.5

Q ss_pred             CcchhhHHHHHHhcC---CchhHHhhhhhhhhhhccCCcchhhhccchHHHHHHHHHHhhcCCCCchhhHHHHHHhhccC
Q psy5930         474 YLPMLMDPLVSALNG---SSTLISQGLRTLELCVDNLQPDFLYDHIQPVRADLMQALWRSLRSPNEQVAHVAYRVLGKFG  550 (2426)
Q Consensus       474 yL~~LM~PLV~AL~~---~~eLvsqGLRTLElcVDNLtpdfLdp~~~pV~~elm~ALw~~Lkp~~~~~~~~a~RILGKLG  550 (2426)
                      ..|.+++.|+..+.+   ++.+...++++|..+.....++...++..+++..+++++-.  ..++..+-..|++.++++.
T Consensus       124 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~--~~~~~~v~~~a~~~l~~~~  201 (458)
T d1ibrb_         124 QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRK--EEPSNNVKLAATNALLNSL  201 (458)
T ss_dssp             CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHST--TCCCHHHHHHHHHHHHHHT
T ss_pred             cCcchhHHHHHHHHhhcchHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhcc--cccCHHHHHHHHHHHHHHH
Confidence            467888889888854   33577889999999999999988777666666555554421  0123457888999999987


Q ss_pred             CCcccccccCCCCccccccCCCCeEEEEecCCCcccccchhH-HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhcccCC
Q psy5930         551 GGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTINLSVEK-AIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLS  629 (2426)
Q Consensus       551 GrNR~~L~~p~~L~~~~~~~~~~~~~~~f~~~~~~~~lpl~~-~i~~A~~~l~~~~~d~~yr~~A~~~l~~~l~~~l~~~  629 (2426)
                      ........                            .-+..+ ........+.  ..|...|+.|++.+..++-..-.. 
T Consensus       202 ~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~l~~i~~~~~~~-  250 (458)
T d1ibrb_         202 EFTKANFD----------------------------KESERHFIMQVVCEATQ--CPDTRVRVAALQNLVKIMSLYYQY-  250 (458)
T ss_dssp             TTTHHHHT----------------------------SHHHHHHHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHCGGG-
T ss_pred             Hhhhhhhh----------------------------hHHHHHHhHhhHHHHhc--CCCHHHHHHHHHHHHHHHHHhHHH-
Confidence            43221100                            000111 2222233333  356677888988877643321100 


Q ss_pred             CChhHHHhhhcCCCCCCCCCCCCcccccCChhHHHHHHHHHHHHHHHhcchhHHHhHHHHHHHHHHHHHHHHHHhhcCCC
Q psy5930         630 DNRSTIQKLFSHPSFGNTESSQGTMYKYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLVVRHYTLVAITQQTGPF  709 (2426)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~f~a~~~~~l~~~a~~f~~~v~rhf~l~~i~~~~~~~  709 (2426)
                                    +...              .......++ ........++.+..|.+|+..+++..........-...
T Consensus       251 --------------~~~~--------------l~~~~~~~~-~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~  301 (458)
T d1ibrb_         251 --------------METY--------------MGPALFAIT-IEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAE  301 (458)
T ss_dssp             --------------CTTT--------------TTTTHHHHH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred             --------------HHHH--------------HHHHHHHHH-HHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence                          0000              000111111 12234566778888899998888775444332111000


Q ss_pred             CCCcccccccCCCCh----HHHHHHHHHhhcCC-------ChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHH
Q psy5930         710 PLYGKSALLEGTMDP----LVLIDAIAVILGHE-------DKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAE  778 (2426)
Q Consensus       710 ~~~~~~~~~~~~ld~----~vl~DAi~~~l~~~-------~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~  778 (2426)
                      ...  ........-.    ..+.+-+...+.+.       ...++..+..++..+..    .+|.       .++..+..
T Consensus       302 ~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~----~~~~-------~~~~~l~~  368 (458)
T d1ibrb_         302 QGR--PPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLAT----CCED-------DIVPHVLP  368 (458)
T ss_dssp             SSS--CSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHH----HTTT-------THHHHHHH
T ss_pred             hhh--HHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHH----hccH-------hhhhHHHH
Confidence            000  0000000000    11334444444422       22356666666665544    2232       23445566


Q ss_pred             HHHHhccCchhhhhHhHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCC
Q psy5930         779 RMCNLCYERAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKE  858 (2426)
Q Consensus       779 rf~~~Cy~~~w~~K~gG~~gi~~l~~~~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~  858 (2426)
                      .+..+..++.|..|.|++.++..+.+                                              .|...   
T Consensus       369 ~i~~~l~s~~~~~r~aal~~l~~i~~----------------------------------------------~~~~~---  399 (458)
T d1ibrb_         369 FIKEHIKNPDWRYRDAAVMAFGCILE----------------------------------------------GPEPS---  399 (458)
T ss_dssp             HHHHHTTCSSHHHHHHHHHHHHHTSS----------------------------------------------SSCTT---
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHH----------------------------------------------hcCHh---
Confidence            66666778889999998888753311                                              01000   


Q ss_pred             CCchhhhhhhhhhHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHhC
Q psy5930         859 PVDAETLTVQSKALSEVTNELTRNITLPNDLLREQSMYLLQVFAETQG  906 (2426)
Q Consensus       859 ~~~~~~~~~~~~~~~~~~~~lv~eL~s~n~~VR~~aq~~L~~lae~t~  906 (2426)
                      .        ....+..++..++.-+.++++.||.+|-.+|..+++..+
T Consensus       400 ~--------~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~~  439 (458)
T d1ibrb_         400 Q--------LKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP  439 (458)
T ss_dssp             T--------TCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGG
T ss_pred             H--------HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhh
Confidence            0        011234467778888999999999999999999998765


No 9  
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.66  E-value=0.12  Score=68.28  Aligned_cols=160  Identities=13%  Similarity=0.140  Sum_probs=115.7

Q ss_pred             HHHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHh
Q psy5930         726 VLIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNT  805 (2426)
Q Consensus       726 vl~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~  805 (2426)
                      .++.-+.+.+.+++...+++|..++..+.+      |..+.  -.|++..+++.+..+..++...-|...|..+.-+.+.
T Consensus       395 ~~l~~l~~~l~s~~~~~reaa~~alg~i~e------g~~~~--~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~  466 (888)
T d1qbkb_         395 HILPLLKELLFHHEWVVKESGILVLGAIAE------GCMQG--MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHW  466 (888)
T ss_dssp             HHHHHHHHTTTSSSHHHHHHHHHHHHHHTT------TSHHH--HTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHhhccchhHHHHHHHHHhhhhhh------hHHHH--hcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence            366777788899999999999998877654      33322  2467788889999999999999999999888877654


Q ss_pred             chHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCC
Q psy5930         806 MAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITL  885 (2426)
Q Consensus       806 ~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s  885 (2426)
                      +...-...+...++.+++..+.|-..    .+...|-.++..+.+.+.....            ..+..++..++.-+..
T Consensus       467 ~~~~~~~~~~~~~l~~ll~~l~d~~~----~V~~~a~~al~~l~~~~~~~l~------------p~~~~il~~l~~~l~~  530 (888)
T d1qbkb_         467 VVSQPPDTYLKPLMTELLKRILDSNK----RVQEAACSAFATLEEEACTELV------------PYLAYILDTLVFAFSK  530 (888)
T ss_dssp             HHSSCHHHHTTTHHHHHHHHHSSSCH----HHHHHHHHHHHHHHHHHTTSSG------------GGHHHHHHHHHHHTTT
T ss_pred             hhhhhhhhhhhhhHHHHHHHhcCCCH----HHHHHHHHHHHHHHHHhhhhhh------------hHHHHHHHHHHHHHhh
Confidence            42222223445677888888877543    3455666677777766543321            2367778888888888


Q ss_pred             CChHHHHHHHHHHHHHHHHhCCch
Q psy5930         886 PNDLLREQSMYLLQVFAETQGKSV  909 (2426)
Q Consensus       886 ~n~~VR~~aq~~L~~lae~t~~~v  909 (2426)
                      ....++..+..++..+++..|..+
T Consensus       531 ~~~~~~~~~~~al~~l~~~~~~~~  554 (888)
T d1qbkb_         531 YQHKNLLILYDAIGTLADSVGHHL  554 (888)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHGGGG
T ss_pred             hhHHHHHHHHHHHHHHHHhhhccc
Confidence            999999999999999998776543


No 10 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.50  E-value=3.9  Score=53.32  Aligned_cols=115  Identities=9%  Similarity=0.081  Sum_probs=83.6

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      +++.+..++.+.+.++++.|..++..+...+..        .-.|+...++.-+....-++.+-.+..+|-+++-++..+
T Consensus       666 l~~~l~~~l~~~~~~vr~~a~~llgdl~~~~~~--------~~~~~l~~~~~~l~~~L~~~~~~v~~~a~~~ig~ia~~~  737 (888)
T d1qbkb_         666 ILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQ--------HVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQM  737 (888)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGG--------GTGGGHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCChHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHH
Confidence            678889999999999999988888766553211        123666777777777777788888998999998888887


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHH
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLC  852 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~  852 (2426)
                      +.. +..+...++.+|+-++.+  ++.+..+.+.+-.++-++...|
T Consensus       738 ~~~-~~py~~~il~~L~~il~~--~~~~~~v~~n~~~~lgrl~~~~  780 (888)
T d1qbkb_         738 GIE-MQPYIPMVLHQLVEIINR--PNTPKTLLENTAITIGRLGYVC  780 (888)
T ss_dssp             GGG-GGGGSHHHHHHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHH-hhhhHHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHC
Confidence            643 445567899999999975  2456666666666776665544


No 11 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.85  E-value=1.2  Score=55.91  Aligned_cols=362  Identities=12%  Similarity=0.082  Sum_probs=182.8

Q ss_pred             HHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhchHHH
Q psy5930         731 IAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTMAIKW  810 (2426)
Q Consensus       731 i~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~~~~w  810 (2426)
                      ++..+++.+-...+.|..++..+.+       ...     .+.--....+.+-|-++..+.+   ++++++|..-....-
T Consensus        71 vi~l~ss~~~~~Kr~gYL~l~~~~~-------~~~-----el~~L~iNtl~KDL~s~n~~ir---~lALr~L~~i~~~~i  135 (584)
T d2vgla_          71 AVNLLSSNRYTEKQIGYLFISVLVN-------SNS-----ELIRLINNAIKNDLASRNPTFM---GLALHCIANVGSREM  135 (584)
T ss_dssp             HHHGGGCSCHHHHHHHHHHHHHSCC-------CCH-----HHHHHHHHHHHHHHHSCCHHHH---HHHHHHHHHHCCHHH
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHcC-------CCc-----hHHHHHHHHHHHHcCCCCHHHH---HHHHHHHHcCCCHHH
Confidence            4678999999999999888765533       111     1112245666777777777776   555666554443333


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCCChHH
Q psy5930         811 VYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLPNDLL  890 (2426)
Q Consensus       811 l~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~n~~V  890 (2426)
                      +..-...+.+.+.      ..+.+.-++..|--++.++.+.+-......              ..+..+..-|.++++.|
T Consensus       136 ~~~l~~~V~k~l~------~~d~~p~VRk~A~l~l~ki~~~~pd~~~~~--------------~~~~~L~~lL~D~d~~V  195 (584)
T d2vgla_         136 AEAFAGEIPKILV------AGDTMDSVKQSAALCLLRLYRTSPDLVPMG--------------DWTSRVVHLLNDQHLGV  195 (584)
T ss_dssp             HHHHTTHHHHHHH------CSSSCHHHHHHHHHHHHHHHHHCGGGCCCC--------------SCHHHHHHHTTCSCHHH
T ss_pred             HHHHHHHHHHhhc------cCCCcHHHHHHHHHHHHHHHHhChhhhhhh--------------hHHHHHHHHhcCCChhH
Confidence            3222222333221      134445577778778878776643221111              12334456667889999


Q ss_pred             HHHHHHHHHHHHHHhCCchhhccccchhhhhccCCCC--cc-c--ccc-CchhhhHhhhhhhhhhcccCCCccccCcchh
Q psy5930         891 REQSMYLLQVFAETQGKSVVQVMEPHKDVLADIIPPK--KL-L--IRN-HSANAQIGLMEGNTFCQSLTPRLFTTDMSIH  964 (2426)
Q Consensus       891 R~~aq~~L~~lae~t~~~v~ell~p~k~~Ll~~I~~K--pl-~--lRa-lpf~~QIG~idaitfcl~L~p~~l~~~~~~~  964 (2426)
                      +.+|-.++..++..............-..+...+..+  .. .  ... .....|+-.++.+........         .
T Consensus       196 ~~aAl~ll~eI~~~~p~~~~~~~~~~i~~L~~ll~~~~~~~~~~~~~~~~~~~lq~~il~ll~~l~~~~~---------~  266 (584)
T d2vgla_         196 VTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPED---------P  266 (584)
T ss_dssp             HHHHHHHHHHHHHHCHHHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCSS---------H
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhhcccHHHHHHHHHHHHHhCCccc---------H
Confidence            9999988888876432111111111111111111000  00 0  000 122456655555443322111         1


Q ss_pred             hHHHHHHHHHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHhhhcCCchhhHHHHHHHHhhcCCCHHHHHHHHHHHH
Q psy5930         965 EHSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASWHYVPNCSQKIFNTLFAALERPNPELQEAAFQAMK 1044 (2426)
Q Consensus       965 el~rll~E~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~~~~~~~~~~rIi~vfFKsL~s~s~ei~~aA~~gLk 1044 (2426)
                      +....+.|.+.-.-.+...............-..+.-.|++.+......++...+++..+.+-|.+.++++.-+|-..+.
T Consensus       267 ~~~~~l~~~l~~Il~~~~~~~~~~~~~~~~~~~aVl~e~i~~i~~~~~~~~~~~~~i~~l~~lL~s~~~niry~aL~~L~  346 (584)
T d2vgla_         267 AVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMC  346 (584)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCcchHHHHHHHHH
Confidence            22222333322110000000000000001111234556777666555566677799999999999999999999999998


Q ss_pred             HHHccCCCChhhHHHhhHHHHhhhcCCCCCC--HhHHHHHHHhhhhCCCcccH-HHHHHHHHHHHHhhhhhhhhhcCCCC
Q psy5930        1045 TFVNGSPIDLKSVYEVMKPLLLTLGDYRNLN--LVTARKLSYIVQPFPSSFSE-KLCEQLLVNLKNLFENIVAQKENPPK 1121 (2426)
Q Consensus      1045 ~vL~~~~~~~e~L~q~LRPiL~nLsD~k~Lt--v~gLegLarLLeLL~nyFkv-eiG~KLLdHLk~~~e~~~~~~~~~~~ 1121 (2426)
                      ..++. ...++.+++....++..+.+...-+  .-.|+-|..   | .|-=|+ +|-..|++|+..- ++..        
T Consensus       347 ~L~~~-~~~~~~~~~~~~~il~~l~~~~~~~Ir~~aL~lL~~---L-~n~~Ni~~Iv~eL~~yl~~~-d~~~--------  412 (584)
T d2vgla_         347 TLASS-EFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYA---M-CDRSNAQQIVAEMLSYLETA-DYSI--------  412 (584)
T ss_dssp             HHTTC-TTTHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHH---H-CCHHHHHHHHHHHHHHHHHC-CHHH--------
T ss_pred             HHHcc-CCCHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHH---h-CCHHHHHHHHHHHHHHHhhC-CHHH--------
Confidence            87653 3446677777888887775433222  222222222   2 222222 3555666665432 1110        


Q ss_pred             CCcchhHHHHHHHhhccCchhHHhhHHHHHHH
Q psy5930        1122 NSETEKIIVVIIGIFKESPAAKAQFIEPLISL 1153 (2426)
Q Consensus      1122 ~~~~~kii~aIinIFHLLP~aa~~Fle~Lv~~ 1153 (2426)
                         ..+++.+|..+=.-.|+.+..+++-++..
T Consensus       413 ---k~~~i~~I~~la~k~~~~~~~~i~~Ll~l  441 (584)
T d2vgla_         413 ---REEIVLKVAILAEKYAVDYTWYVDTILNL  441 (584)
T ss_dssp             ---HHHHHHHHHHHHHHHCSSTHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHCcchHHHHHHHHHHH
Confidence               12344444444444466666677666654


No 12 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.60  E-value=4.3  Score=50.53  Aligned_cols=334  Identities=11%  Similarity=0.073  Sum_probs=182.0

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      .+.++..-|.++++.+|..|..++..+        +..      .+.+++...+..++-++.+|.|..++.++.-+....
T Consensus        84 ~intl~kDl~d~n~~iR~lALr~L~~i--------~~~------~i~~~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~  149 (579)
T d2vglb_          84 AVNSFVKDCEDPNPLIRALAVRTMGCI--------RVD------KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDIN  149 (579)
T ss_dssp             THHHHGGGSSSSSHHHHHHHHHHHHTC--------CSG------GGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHcC--------CCH------HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhccC
Confidence            568888899999999998877776533        222      356889999999999999999999999999888766


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP  886 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~  886 (2426)
                      |..-..   ..++..|...+.|    -...++..|-.++..   .+........        -.-....+..+..-+..+
T Consensus       150 p~~~~~---~~~~~~L~~lL~D----~n~~V~~~Al~~L~~---I~~~~~~~~~--------~~l~~~~i~~Ll~~l~~~  211 (579)
T d2vglb_         150 AQMVED---QGFLDSLRDLIAD----SNPMVVANAVAALSE---ISESHPNSNL--------LDLNPQNINKLLTALNEC  211 (579)
T ss_dssp             CCCHHH---HHHHHHHHHTTSC----SCHHHHHHHHHHHHH---HTTSCCSCCS--------CCCHHHHHHHHHHHHHHC
T ss_pred             hhhhhh---hhHHHHHHHHHcC----CChHHHHHHHHHHHH---HHHhCccchh--------HHhhHHHHHHHHhccCCC
Confidence            432111   1233333334444    344444444444433   3322211110        011333455566677788


Q ss_pred             ChHHHHHHHHHHHHHHHHhCCchhhccccchhhhhccCCCCccccccCchhhhHhhhhhhhhhcccCCCccccCcchhhH
Q psy5930         887 NDLLREQSMYLLQVFAETQGKSVVQVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSLTPRLFTTDMSIHEH  966 (2426)
Q Consensus       887 n~~VR~~aq~~L~~lae~t~~~v~ell~p~k~~Ll~~I~~Kpl~lRalpf~~QIG~idaitfcl~L~p~~l~~~~~~~el  966 (2426)
                      ++.++..+-++|..++.........+++.....           ++.-.-....+.+.++.+++...+..-...   ..+
T Consensus       212 ~~~~q~~il~~L~~~~~~~~~~~~~li~~l~~~-----------L~~~n~~V~~~a~~~i~~~~~~~~~~~~~~---~~~  277 (579)
T d2vglb_         212 TEWGQIFILDCLSNYNPKDDREAQSICERVTPR-----------LSHANSAVVLSAVKVLMKFLELLPKDSDYY---NML  277 (579)
T ss_dssp             CHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTTC-----------SCSSTTHHHHHHHHHHHHSCCSCCBTTBSH---HHH
T ss_pred             CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-----------HcCchHHHHHHHHHHHHHHHhcCCcchHHH---HHH
Confidence            999988777776544332222222333221111           132233455555555555544322111110   111


Q ss_pred             H-HHHHHHHHhhccCchh----h-------hcCC-----CCCC----ccccchHHHHHHHHHHhhhcCCchhhHHHHHHH
Q psy5930         967 S-SFFQEITNICESSDQA----L-------MKLP-----CYKP----ISSLVPLRKAAMRALASWHYVPNCSQKIFNTLF 1025 (2426)
Q Consensus       967 ~-rll~E~l~LadadD~~----l-------~k~~-----~~k~----~~~lv~LRv~ci~lL~~~~~~~~~~~rIi~vfF 1025 (2426)
                      . ++..-...|.+.+.+.    +       .+.+     ..+.    ...-...|..+++++.. +..++-...|+.-+-
T Consensus       278 ~~~l~~~l~~L~s~~~ei~y~aL~~i~~l~~~~p~~l~~~~~~~~~~~~d~~~ik~~~L~iL~~-l~~~~n~~~Il~eL~  356 (579)
T d2vglb_         278 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIR-LASQANIAQVLAELK  356 (579)
T ss_dssp             HHHTHHHHHHHTTSCHHHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHHHHHHH-TCCSSTHHHHHHHHH
T ss_pred             HHHhhHHHHHHhcCCchHHHHHHHHHHHHHHhCHHHHHHHHHHHHhhcCChHHHHHHHHHHHHH-HcChhhHHHHHHHHH
Confidence            1 1111112233222211    0       0101     1110    01124467777776653 345555567999899


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHccCCCChhhHHHhhHHHHhhhcCCC-CCCHhHHHHHHHhhhhCCCcccHHHHHHHHHH
Q psy5930        1026 AALERPNPELQEAAFQAMKTFVNGSPIDLKSVYEVMKPLLLTLGDYR-NLNLVTARKLSYIVQPFPSSFSEKLCEQLLVN 1104 (2426)
Q Consensus      1026 KsL~s~s~ei~~aA~~gLk~vL~~~~~~~e~L~q~LRPiL~nLsD~k-~Ltv~gLegLarLLeLL~nyFkveiG~KLLdH 1104 (2426)
                      +.+...+.++...|-.++...-..   .++.....+..++.-+++.. ...-..+..+..+++-.++.+.. +-..|.++
T Consensus       357 ~y~~~~d~~~~~~ai~aI~~la~~---~~~~~~~~i~~Ll~ll~~~~~~v~~e~i~~i~~i~~~~p~~~~~-ii~~L~~~  432 (579)
T d2vglb_         357 EYATEVDVDFVRKAVRAIGRCAIK---VEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYES-IIATLCEN  432 (579)
T ss_dssp             HHTTSSCHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHSCSSCCT-THHHHHHT
T ss_pred             HHhhcCCHHHHHHHHHHHHHHHHh---CchHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhChHHHHH-HHHHHHHH
Confidence            999999999999999998876542   23444444555554455433 33345667777777888887753 44566666


Q ss_pred             HHHhhhh
Q psy5930        1105 LKNLFEN 1111 (2426)
Q Consensus      1105 Lk~~~e~ 1111 (2426)
                      +..+.++
T Consensus       433 l~~~~~~  439 (579)
T d2vglb_         433 LDSLDEP  439 (579)
T ss_dssp             TTTCCSH
T ss_pred             HHhcCcH
Confidence            6554443


No 13 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.59  E-value=3.2  Score=48.37  Aligned_cols=336  Identities=13%  Similarity=0.030  Sum_probs=165.6

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      +.++++.++.+++...+.++ .++..+..   ...+..   .--.++..+...+.+.  +..|..+.|++..+..+.+..
T Consensus        90 i~~~ll~~~~~~~~~~~~~~-~~~~~i~~---~~~~~~---~~~~~~~~l~~~l~~~--~~~~~~~~~~l~~l~~~~~~~  160 (458)
T d1ibrb_          90 VKNYVLQTLGTETYRPSSAS-QCVAGIAC---AEIPVN---QWPELIPQLVANVTNP--NSTEHMKESTLEAIGYICQDI  160 (458)
T ss_dssp             HHHHHHHHTTCCCSSSCSHH-HHHHHHHH---HHGGGT---CCTTHHHHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHhccCCCcHHHHHHH-HHHHHHHH---HhCCcc---cCcchhHHHHHHHHhh--cchHHHHHHHHHHHHHHHhhc
Confidence            67788899988877665543 34433322   111111   1123555566655442  334666778888888888877


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP  886 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~  886 (2426)
                      +..-...+...++..++..+.+-  +.+..++..|-.++..++.....         . .........+...+..-+.++
T Consensus       161 ~~~~~~~~~~~il~~~~~~l~~~--~~~~~v~~~a~~~l~~~~~~~~~---------~-~~~~~~~~~~~~~l~~~~~~~  228 (458)
T d1ibrb_         161 DPEQLQDKSNEILTAIIQGMRKE--EPSNNVKLAATNALLNSLEFTKA---------N-FDKESERHFIMQVVCEATQCP  228 (458)
T ss_dssp             CGGGTGGGHHHHHHHHHHHHSTT--CCCHHHHHHHHHHHHHHTTTTHH---------H-HTSHHHHHHHHHHHHHHTTCS
T ss_pred             cchhhhhhHHHHHHHHHHHhccc--ccCHHHHHHHHHHHHHHHHhhhh---------h-hhhHHHHHHhHhhHHHHhcCC
Confidence            66555667778888888888763  33334444444444333321110         0 001122333455566667889


Q ss_pred             ChHHHHHHHHHHHHHHHHhCCchhhccccchhhhhccCCCCc---cccccCchhhhHhhhhhhhh--h----cccCCCcc
Q psy5930         887 NDLLREQSMYLLQVFAETQGKSVVQVMEPHKDVLADIIPPKK---LLIRNHSANAQIGLMEGNTF--C----QSLTPRLF  957 (2426)
Q Consensus       887 n~~VR~~aq~~L~~lae~t~~~v~ell~p~k~~Ll~~I~~Kp---l~lRalpf~~QIG~idaitf--c----l~L~p~~l  957 (2426)
                      +..||..+-++|..+++....-+..-+.+.-..++......+   ....++.|-..++-.+...+  +    ....++..
T Consensus       229 ~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  308 (458)
T d1ibrb_         229 DTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH  308 (458)
T ss_dssp             SHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSC
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhhHHHH
Confidence            999999999999999987653322222221111110000000   00011112222211110000  0    00111111


Q ss_pred             ccCcchhhHHHHHHHHHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHhhh-cC-CchhhHHHHHHHHhhcCCCHHH
Q psy5930         958 TTDMSIHEHSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASWH-YV-PNCSQKIFNTLFAALERPNPEL 1035 (2426)
Q Consensus       958 ~~~~~~~el~rll~E~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~~~-~~-~~~~~rIi~vfFKsL~s~s~ei 1035 (2426)
                      ...   .-....+.+........+.   ...+.. ...--..|.++..++.... .. .++...++..+.+.+.+++..+
T Consensus       309 ~~~---~~~~~~~~~l~~~l~~~~~---~~~~~~-~~~~~~~~~~a~~~l~~l~~~~~~~~~~~l~~~i~~~l~s~~~~~  381 (458)
T d1ibrb_         309 TSK---FYAKGALQYLVPILTQTLT---KQDEND-DDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRY  381 (458)
T ss_dssp             CCC---CHHHHHHHHHHHHHHHHTT---CCCSSC-CTTCCSHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTCSSHHH
T ss_pred             HHH---HHHHHHHHHHhhhHHhhhh---cchhhh-ccccccHHHHHHHHHHHHHHhccHhhhhHHHHHHHHHhcCCCHHH
Confidence            111   0011122222111100000   000000 0111135666655555332 22 2455678888889999999999


Q ss_pred             HHHHHHHHHHHHccC--CCChhhHHHhhHHHHhhhcCCC-CCCHhHHHHHHHhhhhCC
Q psy5930        1036 QEAAFQAMKTFVNGS--PIDLKSVYEVMKPLLLTLGDYR-NLNLVTARKLSYIVQPFP 1090 (2426)
Q Consensus      1036 ~~aA~~gLk~vL~~~--~~~~e~L~q~LRPiL~nLsD~k-~Ltv~gLegLarLLeLL~ 1090 (2426)
                      .++|-.+|-.+..+.  ..-++.+.+.+..++..++|.. ++-...+..|+++.+.++
T Consensus       382 r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~~  439 (458)
T d1ibrb_         382 RDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP  439 (458)
T ss_dssp             HHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhh
Confidence            999999998877542  2223344444555666667643 455666777777766553


No 14 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.77  E-value=61  Score=40.12  Aligned_cols=94  Identities=13%  Similarity=0.134  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCccccchhhHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCChhHHHHhhHHHHHHHHHH
Q psy5930        1730 LARRCVSLIRMALKPEVWSHQNTEFKLTWLDKVLSSIDQPTANLGNISIALELLTLLITILDEGQILHIIKPLQRGLVAC 1809 (2426)
Q Consensus      1730 L~~r~l~LLk~~L~p~~W~~~~v~vkl~~feK~L~~~d~~~~n~~~~~naLevL~il~~~~~~~~il~nl~~lq~lL~kc 1809 (2426)
                      .+..|+..+...+..+.-     ..-+.+++..+     .+.+....-.++..+..+........+...+..+-..+.++
T Consensus       350 ~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~  419 (861)
T d2bpta1         350 SAGACLQLFAQNCGNHIL-----EPVLEFVEQNI-----TADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNL  419 (861)
T ss_dssp             HHHHHHHHHHHHHGGGGH-----HHHHHHHHHHT-----TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhhcchhhh-----hhhcchhhhhh-----hhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Confidence            345566666555532211     11223344333     23344555666777888887777777777788888888889


Q ss_pred             HhcCchhHHHHHHHHHHHHHhcCC
Q psy5930        1810 ISSSITKVIRLVHALLCRLMSTFP 1833 (2426)
Q Consensus      1810 l~~~n~~i~~~l~~ll~rll~~~p 1833 (2426)
                      +..+++.+.+.....++++.+.++
T Consensus       420 l~d~~~~vr~~a~~~l~~l~~~~~  443 (861)
T d2bpta1         420 MNDQSLQVKETTAWCIGRIADSVA  443 (861)
T ss_dssp             GGCSCHHHHHHHHHHHHHHHHHHG
T ss_pred             hcCcchhhhhHHHHHHHHHHHHhc
Confidence            999999999999999998888766


No 15 
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.90  E-value=21  Score=41.02  Aligned_cols=314  Identities=14%  Similarity=0.112  Sum_probs=154.0

Q ss_pred             HHHHHHHhhcCC-ChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhH-HHHHHHHHHhccCchhhhhHhHHHHHHHHHH
Q psy5930         727 LIDAIAVILGHE-DKELCKPGYIALKCIMETATCITGSIENACNLPLM-EYLAERMCNLCYERAWYAKLGGCYAIKFFYN  804 (2426)
Q Consensus       727 l~DAi~~~l~~~-~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~-~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~  804 (2426)
                      ++..++..|.+. +++++..+..++..+..      ++.+..  ..++ ...+..++++...+....+..++.++.-+..
T Consensus        57 ~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~------~~~~~~--~~i~~~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~  128 (434)
T d1q1sc_          57 LIPKFVSFLGKTDCSPIQFESAWALTNIAS------GTSEQT--KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAG  128 (434)
T ss_dssp             CHHHHHHHTTCGGGHHHHHHHHHHHHHHHT------SCHHHH--HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHccCCCHHHHHHHHHHHHHHhc------CChhhh--hHhhhccchhhhhhccccCCHHHHHHHHHHHHHHhc
Confidence            456677788644 45666666667665532      222111  0111 1234445555555555555555555555543


Q ss_pred             hc--hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhh
Q psy5930         805 TM--AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRN  882 (2426)
Q Consensus       805 ~~--~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  882 (2426)
                      .-  ....+.+.  ..+..|+..+..-......  ..........+-..|....... .       ......++..++.-
T Consensus       129 ~~~~~~~~i~~~--~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~-~-------~~~~~~~l~~l~~l  196 (434)
T d1q1sc_         129 DGSAFRDLVIKH--GAIDPLLALLAVPDLSTLA--CGYLRNLTWTLSNLCRNKNPAP-P-------LDAVEQILPTLVRL  196 (434)
T ss_dssp             TCHHHHHHHHHT--TCHHHHHHHTCSSCGGGSC--HHHHHHHHHHHHHHTCCCTTCC-C-------HHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHh--hhhhHHHHHHHhcccccch--HHHHHHHHHHHHHHhhcccccc-h-------hhhhhhHHHHHHHH
Confidence            32  22344332  3455566666544333221  1122222222333332221111 0       11234455666666


Q ss_pred             cCCCChHHHHHHHHHHHHHHHHhCCchhhcccc-chhhhhccCCCCccccccCchhhhHhhhhhhhhhcccCCCccccCc
Q psy5930         883 ITLPNDLLREQSMYLLQVFAETQGKSVVQVMEP-HKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSLTPRLFTTDM  961 (2426)
Q Consensus       883 L~s~n~~VR~~aq~~L~~lae~t~~~v~ell~p-~k~~Ll~~I~~Kpl~lRalpf~~QIG~idaitfcl~L~p~~l~~~~  961 (2426)
                      +.+.+..+|..|-.+|..++...+.-...+..+ .-+.|...       ++.-....|...+.++.++..-.+       
T Consensus       197 l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~l-------l~~~~~~~~~~al~~l~~l~~~~~-------  262 (434)
T d1q1sc_         197 LHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKL-------LGATELPIVTPALRAIGNIVTGTD-------  262 (434)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHH-------HTCSCHHHHHHHHHHHHHHTTSCH-------
T ss_pred             HhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccc-------cccchhhhhhchhhhhhhHHhhhh-------
Confidence            788899999988888877764221111111111 01111111       122234455555555554443211       


Q ss_pred             chhhHHHHHHH------HHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHhhhc-CCchhh-----HHHHHHHHhhc
Q psy5930         962 SIHEHSSFFQE------ITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASWHY-VPNCSQ-----KIFNTLFAALE 1029 (2426)
Q Consensus       962 ~~~el~rll~E------~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~~~~-~~~~~~-----rIi~vfFKsL~ 1029 (2426)
                         +....+.+      +..+.+..|               ...|..|+.+|+.... .++...     .++..+++.+.
T Consensus       263 ---~~~~~~~~~~~~~~l~~ll~~~~---------------~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~  324 (434)
T d1q1sc_         263 ---EQTQKVIDAGALAVFPSLLTNPK---------------TNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLS  324 (434)
T ss_dssp             ---HHHHHHHHTTGGGGHHHHTTCSS---------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHH
T ss_pred             ---HHHHHHHhccccchHHHhhcccc---------------hhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHh
Confidence               11111111      111111111               1356666666664433 333332     56788999999


Q ss_pred             CCCHHHHHHHHHHHHHHHccCCCC--hhhHHHh-hHHHHhhhcC-CCCCCHhHHHHHHHhhhhCCCc
Q psy5930        1030 RPNPELQEAAFQAMKTFVNGSPID--LKSVYEV-MKPLLLTLGD-YRNLNLVTARKLSYIVQPFPSS 1092 (2426)
Q Consensus      1030 s~s~ei~~aA~~gLk~vL~~~~~~--~e~L~q~-LRPiL~nLsD-~k~Ltv~gLegLarLLeLL~ny 1092 (2426)
                      +.++++...|-.++.....+....  ...+.++ +.|+..-|.+ ..++-...|++|..|++...++
T Consensus       325 ~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~~~~~~  391 (434)
T d1q1sc_         325 KADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKL  391 (434)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999987654321  2234455 5555444432 3446667888888888765544


No 16 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.85  E-value=1e+02  Score=38.96  Aligned_cols=109  Identities=16%  Similarity=0.116  Sum_probs=68.2

Q ss_pred             hHHHHHHHHHHhhhc--CCchhhHHHHHHHHhhcCCCHHHHHHHHHHHHHHHccCC--------CChhhHHHhhHHHHhh
Q psy5930         998 PLRKAAMRALASWHY--VPNCSQKIFNTLFAALERPNPELQEAAFQAMKTFVNGSP--------IDLKSVYEVMKPLLLT 1067 (2426)
Q Consensus       998 ~LRv~ci~lL~~~~~--~~~~~~rIi~vfFKsL~s~s~ei~~aA~~gLk~vL~~~~--------~~~e~L~q~LRPiL~n 1067 (2426)
                      -+|..++.++.....  .++....++..+++.|.++++.+...|-.+++.++....        ...+.+...+.+++.+
T Consensus       473 ~lr~~~~~~i~~~~~~~~~~~~~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~  552 (959)
T d1wa5c_         473 ILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKN  552 (959)
T ss_dssp             HHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccccchhhccHHHHHhhHHHHHHH
Confidence            366666666654322  234556899999999999999999999999999985321        2234444444444433


Q ss_pred             h----cC----CCC--CCHhHHHHHHHhhhhCCCcccHHHHHHHHHHHHH
Q psy5930        1068 L----GD----YRN--LNLVTARKLSYIVQPFPSSFSEKLCEQLLVNLKN 1107 (2426)
Q Consensus      1068 L----sD----~k~--Ltv~gLegLarLLeLL~nyFkveiG~KLLdHLk~ 1107 (2426)
                      |    .+    ..+  ..-..++.++++.+.+...+.. ....++++|-.
T Consensus       553 L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~-~~~~i~~~l~~  601 (959)
T d1wa5c_         553 LIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQP-LFPQLLAQFIE  601 (959)
T ss_dssp             HHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGG-GHHHHHHHHHH
T ss_pred             HHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            3    11    111  2344778888888887777653 44556666543


No 17 
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.93  E-value=30  Score=40.99  Aligned_cols=154  Identities=12%  Similarity=0.132  Sum_probs=90.6

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      ++++++..+.+....+...+..++..++       ..............+++.+++++....+......|.++..++..-
T Consensus       205 ~~~~L~~ll~~~~~~~~~~~~~~l~nl~-------~~~~~~~~~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~  277 (503)
T d1wa5b_         205 AMEPILGLFNSNKPSLIRTATWTLSNLC-------RGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGP  277 (503)
T ss_dssp             CHHHHHHGGGSCCHHHHHHHHHHHHHHH-------CCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSC
T ss_pred             ccccchhhcccCCHHHHHHHHHHHHHHh-------cCCccchHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCC
Confidence            5677888888888877766666665443       222222333445567778888888888989999999999998766


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP  886 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~  886 (2426)
                      +...-.-....++..++..++.-..    .+...|-.++..+    ..... .   ........   +++..+..=+.++
T Consensus       278 ~~~~~~~~~~~~~~~l~~ll~~~~~----~v~~~al~~l~nl----~~~~~-~---~~~~~~~~---~~l~~l~~ll~~~  342 (503)
T d1wa5b_         278 QEAIQAVIDVRIPKRLVELLSHEST----LVQTPALRAVGNI----VTGND-L---QTQVVINA---GVLPALRLLLSSP  342 (503)
T ss_dssp             HHHHHHHHHTTCHHHHHHGGGCSCH----HHHHHHHHHHHHH----TTSCH-H---HHHHHHHT---THHHHHHHHTTCS
T ss_pred             chhhhhhhhhhhhhhhhhcccCCch----hhhhhHHHHHHHH----HHHHH-H---HHHhhhcc---chHHHHHHHhcCC
Confidence            4433333335677777777764322    2222222222222    11100 0   00001111   2344555567889


Q ss_pred             ChHHHHHHHHHHHHHH
Q psy5930         887 NDLLREQSMYLLQVFA  902 (2426)
Q Consensus       887 n~~VR~~aq~~L~~la  902 (2426)
                      ++.||+.+-.++..++
T Consensus       343 ~~~i~~~~~~~l~nl~  358 (503)
T d1wa5b_         343 KENIKKEACWTISNIT  358 (503)
T ss_dssp             CHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            9999998877776665


No 18 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.69  E-value=72  Score=34.27  Aligned_cols=157  Identities=11%  Similarity=0.018  Sum_probs=91.4

Q ss_pred             HHHHHH-hhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         728 IDAIAV-ILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       728 ~DAi~~-~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      +++++. .+.+++++++..|..+|..+.......   .........+..|.+-+.+   +...-.+..++.++..++...
T Consensus        60 ~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~---~~~~~~~~~i~~Lv~lL~~---~~~~~v~~~a~~aL~~l~~~~  133 (264)
T d1xqra1          60 MHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAI---QEQVLGLGALRKLLRLLDR---DACDTVRVKALFAISCLVREQ  133 (264)
T ss_dssp             HHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHH---HHHHHHTTHHHHHHHHHHH---CSCHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHcCchHHHHHHhhc---CCCHHHHHHHHHHHHHHhccc
Confidence            455554 678899999999999988776411000   0111222344455554433   233456777888888888777


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP  886 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~  886 (2426)
                      +...-.-.+...+..|+..+++-.    ..+...|-.++..++..   .  +..  .. ...   -.+.+..++.-|.++
T Consensus       134 ~~~~~~~~~~~gi~~L~~lL~~~~----~~~~~~a~~~L~~l~~~---~--~~~--~~-~~~---~~~~v~~L~~lL~~~  198 (264)
T d1xqra1         134 EAGLLQFLRLDGFSVLMRAMQQQV----QKLKVKSAFLLQNLLVG---H--PEH--KG-TLC---SMGMVQQLVALVRTE  198 (264)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHSSC----HHHHHHHHHHHHHHHHH---C--GGG--HH-HHH---HTTHHHHHHHHHTSC
T ss_pred             hhhHHHHHHhhhhhHHHHHHhcCc----hHHHHHHHHHHHHHHhc---c--HHH--HH-HHH---HhhhHHHHHHHHcCC
Confidence            543333334556788888887643    33444455555544432   1  000  00 000   112456667777899


Q ss_pred             ChHHHHHHHHHHHHHHHHh
Q psy5930         887 NDLLREQSMYLLQVFAETQ  905 (2426)
Q Consensus       887 n~~VR~~aq~~L~~lae~t  905 (2426)
                      ++.||+.|-.+|..+++-+
T Consensus       199 ~~~~~~~a~~aL~~L~~~~  217 (264)
T d1xqra1         199 HSPFHEHVLGALCSLVTDF  217 (264)
T ss_dssp             CSTHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHhcC
Confidence            9999999999998888643


No 19 
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.37  E-value=90  Score=35.28  Aligned_cols=174  Identities=12%  Similarity=0.107  Sum_probs=91.2

Q ss_pred             HHHHHhhhcCCCChHHHHHHHHHHHHHHHHhCCchhhcc-c-cchhhhhccCCCCccccccCchhhhHhhhhhhhhhccc
Q psy5930         875 VTNELTRNITLPNDLLREQSMYLLQVFAETQGKSVVQVM-E-PHKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSL  952 (2426)
Q Consensus       875 ~~~~lv~eL~s~n~~VR~~aq~~L~~lae~t~~~v~ell-~-p~k~~Ll~~I~~Kpl~lRalpf~~QIG~idaitfcl~L  952 (2426)
                      .+..++.-|.+++..+|+.|-.+|..++.-. ....+.+ + ..-+.|+.-+.....  .......+.....++..+...
T Consensus       100 ~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~-~~~~~~i~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~l~~~~~~  176 (434)
T d1q1sc_         100 AIPAFISLLASPHAHISEQAVWALGNIAGDG-SAFRDLVIKHGAIDPLLALLAVPDL--STLACGYLRNLTWTLSNLCRN  176 (434)
T ss_dssp             HHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC-HHHHHHHHHTTCHHHHHHHTCSSCG--GGSCHHHHHHHHHHHHHHTCC
T ss_pred             chhhhhhccccCCHHHHHHHHHHHHHHhccc-hHHHHHHHHhhhhhHHHHHHHhccc--ccchHHHHHHHHHHHHHHhhc
Confidence            4667778889999999999999988877421 1111111 1 122233333332222  222223333333333333222


Q ss_pred             CCCccccCcchhhHHHHHHHHHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHhhhcCCchh------hHHHHHHHH
Q psy5930         953 TPRLFTTDMSIHEHSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASWHYVPNCS------QKIFNTLFA 1026 (2426)
Q Consensus       953 ~p~~l~~~~~~~el~rll~E~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~~~~~~~~~------~rIi~vfFK 1026 (2426)
                      .++...+.    ....++.-+..+...+|+.               +|..|+..|+.....++..      ..++..+.+
T Consensus       177 ~~~~~~~~----~~~~~l~~l~~ll~~~~~~---------------~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~  237 (434)
T d1q1sc_         177 KNPAPPLD----AVEQILPTLVRLLHHNDPE---------------VLADSCWAISYLTDGPNERIEMVVKKGVVPQLVK  237 (434)
T ss_dssp             CTTCCCHH----HHHHHHHHHHHHTTCSCHH---------------HHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHH
T ss_pred             ccccchhh----hhhhHHHHHHHHHhccccc---------------hhhhHHhhhcccchhhhhhHHHHhhcccchhccc
Confidence            33222221    2223444444555444433               4555555555433333322      145677888


Q ss_pred             hhcCCCHHHHHHHHHHHHHHHccCCCChhh-HHHh-hHHHHhhhcC
Q psy5930        1027 ALERPNPELQEAAFQAMKTFVNGSPIDLKS-VYEV-MKPLLLTLGD 1070 (2426)
Q Consensus      1027 sL~s~s~ei~~aA~~gLk~vL~~~~~~~e~-L~q~-LRPiL~nLsD 1070 (2426)
                      .+.+.+++++..|-.+|.....++...... +..+ +.++..-|++
T Consensus       238 ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~  283 (434)
T d1q1sc_         238 LLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTN  283 (434)
T ss_dssp             HHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTC
T ss_pred             ccccchhhhhhchhhhhhhHHhhhhHHHHHHHhccccchHHHhhcc
Confidence            899999999999999999887665433333 3344 5554444443


No 20 
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.78  E-value=54  Score=38.58  Aligned_cols=91  Identities=20%  Similarity=0.133  Sum_probs=61.6

Q ss_pred             hHHHHHHHHHHhhhc-CCchhh-----HHHHHHHHhhcCCCHHHHHHHHHHHHHHHccCCCChh----hHHHh-hHHHHh
Q psy5930         998 PLRKAAMRALASWHY-VPNCSQ-----KIFNTLFAALERPNPELQEAAFQAMKTFVNGSPIDLK----SVYEV-MKPLLL 1066 (2426)
Q Consensus       998 ~LRv~ci~lL~~~~~-~~~~~~-----rIi~vfFKsL~s~s~ei~~aA~~gLk~vL~~~~~~~e----~L~q~-LRPiL~ 1066 (2426)
                      .+|..++.+++.... .++...     .++..++..|.+.+.++...|-.+|..+..+....++    +...+ +.|+..
T Consensus       345 ~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~  424 (503)
T d1wa5b_         345 NIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCD  424 (503)
T ss_dssp             HHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHccccchhHHhcccCChhHHHHHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHH
Confidence            356677777764433 334332     5567788999999999999999999999876544433    33455 777766


Q ss_pred             hhcC-CCCCCHhHHHHHHHhhhh
Q psy5930        1067 TLGD-YRNLNLVTARKLSYIVQP 1088 (2426)
Q Consensus      1067 nLsD-~k~Ltv~gLegLarLLeL 1088 (2426)
                      -|.. ..++....|++|..|++.
T Consensus       425 ~L~~~d~~~~~~~L~~l~~ll~~  447 (503)
T d1wa5b_         425 LLEIADNRIIEVTLDALENILKM  447 (503)
T ss_dssp             HTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHH
Confidence            6642 344556678888887754


No 21 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.75  E-value=38  Score=36.69  Aligned_cols=171  Identities=11%  Similarity=0.078  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHhcCChhHHHHhhHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhcCCCCCCCCCccCchhh-HHHHHH
Q psy5930        1775 NISIALELLTLLITILDEGQILHIIKPLQRGLVACISSSITKVIRLVHALLCRLMSTFPTEPISSNVASKREE-LDHLYV 1853 (2426)
Q Consensus      1775 ~~~naLevL~il~~~~~~~~il~nl~~lq~lL~kcl~~~n~~i~~~l~~ll~rll~~~p~~~~~~~~~~~~~e-~~~f~~ 1853 (2426)
                      ...+|+++|..+....+...-+..+.-++.++..++++++.+++.....++..+...-|.        .+..- ......
T Consensus        33 ~~~~Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~--------~~~~~~~~~~i~  104 (264)
T d1xqra1          33 EREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAA--------IQEQVLGLGALR  104 (264)
T ss_dssp             HHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHH--------HHHHHHHTTHHH
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH--------HHHHHHHcCchH
Confidence            467789999999987776777777888899999999999999999999999888853220        00000 001122


Q ss_pred             HHHHHHHhhhccccCCCCCCcchHHHHHHHHHHHhhhCchhhhHh-----hHHHHHHHHHHHHHhhccCCCCCCccchHH
Q psy5930        1854 CVSKVIYEGLSNYEKNPTATCSTLYGTVMMLKAACMNHPAYVDRF-----ILEFMRVIQRMAREHIATSTADAPQQVGGE 1928 (2426)
Q Consensus      1854 ~l~~~i~e~L~~~~~~~~~~~~~~~~~l~lL~~~~~~~p~~iD~~-----l~~lmk~l~kl~keHl~~~~~~~~~~~~~~ 1928 (2426)
                      .+.+.++..-         .......++..|..++.++|.....+     ++.+++.++    .    .        ..+
T Consensus       105 ~Lv~lL~~~~---------~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~----~----~--------~~~  159 (264)
T d1xqra1         105 KLLRLLDRDA---------CDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ----Q----Q--------VQK  159 (264)
T ss_dssp             HHHHHHHHCS---------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH----S----S--------CHH
T ss_pred             HHHHHhhcCC---------CHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHh----c----C--------chH
Confidence            2223332210         02233456778888888888766554     455555542    1    0        112


Q ss_pred             HHHHHHHHHhHhhhcCCHHHHHHHHH-----HHHHHHhccCCCHHHHHHHHHHHHHHh
Q psy5930        1929 LLIYCLDLVKTRFCSMSQETRKQFIG-----TIILGLIDKTPDIKVMKAIIKMTEEWL 1981 (2426)
Q Consensus      1929 ll~~~leLl~~Rv~~lg~d~Rr~fls-----~l~~~LiekS~d~~ll~~Il~iv~~Wv 1981 (2426)
                      +..+++..+..=... .++.+..+..     .++. |+ ++.|.++....+..+....
T Consensus       160 ~~~~a~~~L~~l~~~-~~~~~~~~~~~~~v~~L~~-lL-~~~~~~~~~~a~~aL~~L~  214 (264)
T d1xqra1         160 LKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLVA-LV-RTEHSPFHEHVLGALCSLV  214 (264)
T ss_dssp             HHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHHH-HH-TSCCSTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc-cHHHHHHHHHhhhHHHHHH-HH-cCCCHHHHHHHHHHHHHHH
Confidence            333333333321111 2255555543     2322 33 5667777777777776654


No 22 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.33  E-value=2.4e+02  Score=33.78  Aligned_cols=31  Identities=16%  Similarity=0.168  Sum_probs=23.2

Q ss_pred             HHHHHHHhhc--CCChhhhhHHHHHHHHHHHHH
Q psy5930         727 LIDAIAVILG--HEDKELCKPGYIALKCIMETA  757 (2426)
Q Consensus       727 l~DAi~~~l~--~~~~~~~~~~~~~l~~~~~~~  757 (2426)
                      +...+..++.  +..+-+|+.|..++..++...
T Consensus       139 l~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~  171 (584)
T d2vgla_         139 FAGEIPKILVAGDTMDSVKQSAALCLLRLYRTS  171 (584)
T ss_dssp             HTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhhccCCCcHHHHHHHHHHHHHHHHhC
Confidence            5566666665  556779999999998888753


No 23 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=50.54  E-value=53  Score=34.78  Aligned_cols=132  Identities=11%  Similarity=0.091  Sum_probs=80.3

Q ss_pred             HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc
Q psy5930         727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM  806 (2426)
Q Consensus       727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~  806 (2426)
                      -.|.+...|.++++.+|..|..++..+        |+.          ...+.+..+|.++.|+.+..++.++..+....
T Consensus        20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~--------~~~----------~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~   81 (276)
T d1oyza_          20 NDDELFRLLDDHNSLKRISSARVLQLR--------GGQ----------DAVRLAIEFCSDKNYIRRDIGAFILGQIKICK   81 (276)
T ss_dssp             CHHHHHHHTTCSSHHHHHHHHHHHHHH--------CCH----------HHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCT
T ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHhh--------CCH----------hHHHHHHHHHcCCCHHHHHHHHHHHHHhcccc
Confidence            367889999999999999999988654        432          24566778889999999999999987653222


Q ss_pred             h-HHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCC
Q psy5930         807 A-IKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITL  885 (2426)
Q Consensus       807 ~-~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s  885 (2426)
                      . ...+..   .+++.+   ++|-    ...+...|-..+..+   +...             ......++..+...+.+
T Consensus        82 ~~~~~~~~---~l~~~~---l~d~----~~~vr~~a~~aL~~~---~~~~-------------~~~~~~~~~~l~~~~~d  135 (276)
T d1oyza_          82 KCEDNVFN---ILNNMA---LNDK----SACVRATAIESTAQR---CKKN-------------PIYSPKIVEQSQITAFD  135 (276)
T ss_dssp             TTHHHHHH---HHHHHH---HHCS----CHHHHHHHHHHHHHH---HHHC-------------GGGHHHHHHHHHHHTTC
T ss_pred             ccccchHH---HHHHHH---hcCC----ChhHHHHHHHHHHHH---cccc-------------chhhHHHHHHHHHHhcC
Confidence            1 111111   111111   3332    233444444444332   2111             01133456677788888


Q ss_pred             CChHHHHHHHHHHHHHH
Q psy5930         886 PNDLLREQSMYLLQVFA  902 (2426)
Q Consensus       886 ~n~~VR~~aq~~L~~la  902 (2426)
                      ++..||..+-.++..+.
T Consensus       136 ~~~~vr~~a~~~l~~~~  152 (276)
T d1oyza_         136 KSTNVRRATAFAISVIN  152 (276)
T ss_dssp             SCHHHHHHHHHHHHTC-
T ss_pred             cchHHHHHHHHHHhhcc
Confidence            99999988776665443


No 24 
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.35  E-value=1.8e+02  Score=33.84  Aligned_cols=153  Identities=10%  Similarity=0.055  Sum_probs=81.6

Q ss_pred             HHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhc-
Q psy5930         728 IDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTM-  806 (2426)
Q Consensus       728 ~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~-  806 (2426)
                      +-.++..|.+++.+++..|..++..+.......   ...+....++..|..- ...+-+..  .+..++..+..|..+- 
T Consensus        19 ip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~---~~~~~~~~~v~~l~~~-L~~~~~~~--~~~~a~~~L~~l~~~~~   92 (529)
T d1jdha_          19 IPELTKLLNDEDQVVVNKAAVMVHQLSKKEASR---HAIMRSPQMVSAIVRT-MQNTNDVE--TARCTAGTLHNLSHHRE   92 (529)
T ss_dssp             HHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHH---HHHHTCHHHHHHHHHH-HHHCCCHH--HHHHHHHHHHHHTTSHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHH---HHHHHhhhHHHHHHHH-HcCCCCHH--HHHHHHHHHHHHhCCch
Confidence            677899999999999988888887663211000   0000011123333322 22222333  3333344444454433 


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC
Q psy5930         807 AIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP  886 (2426)
Q Consensus       807 ~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~  886 (2426)
                      ...++.+.  ..+..|+..|++-.    ..+...|-.+|..+.   ...  +.      ....-.-.+.+..|+.-|.++
T Consensus        93 ~~~~i~~~--g~i~~Li~lL~~~~----~~v~~~a~~aL~~l~---~~~--~~------~~~~~~~~g~i~~Lv~lL~~~  155 (529)
T d1jdha_          93 GLLAIFKS--GGIPALVKMLGSPV----DSVLFYAITTLHNLL---LHQ--EG------AKMAVRLAGGLQKMVALLNKT  155 (529)
T ss_dssp             HHHHHHHT--THHHHHHHHTTCSC----HHHHHHHHHHHHHHH---HHC--TT------HHHHHHHHTHHHHHHHGGGCC
T ss_pred             hHHHHHHC--CCHHHHHHHhCCCC----HHHHHHHHHHHHHhh---ccc--ch------hhhHHHhcCCchHHHHHHHcc
Confidence            33555543  46777777776532    234445555554443   211  00      000001223566677778899


Q ss_pred             ChHHHHHHHHHHHHHHH
Q psy5930         887 NDLLREQSMYLLQVFAE  903 (2426)
Q Consensus       887 n~~VR~~aq~~L~~lae  903 (2426)
                      +..+|..+-.+|..++.
T Consensus       156 ~~~~~~~a~~~L~~l~~  172 (529)
T d1jdha_         156 NVKFLAITTDCLQILAY  172 (529)
T ss_dssp             CHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHhh
Confidence            99999999999988875


No 25 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.72  E-value=30  Score=32.81  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=60.3

Q ss_pred             CcHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhcCccHHHHHHHhhhcC-ch---
Q psy5930        2297 GLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSALREEDMWFGLWQKNAK-HK--- 2372 (2426)
Q Consensus      2297 naW~~ai~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DaL~eLY~~L~E~D~~~GlWrrra~-~~--- 2372 (2426)
                      +-|-.|+...++.+..                   +      +.....+..++..|..+++.+.=...+.+-.. .|   
T Consensus        17 g~~~eAi~~~~~al~~-------------------~------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~   71 (117)
T d1elwa_          17 GNIDDALQCYSEAIKL-------------------D------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG   71 (117)
T ss_dssp             TCHHHHHHHHHHHHHH-------------------C------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred             CCHHHHHHHHHHHHhc-------------------C------CcchhhhhcccccccccccccccchhhhhHHHhccchh
Confidence            6788899988886651                   1      11234677899999999999988888876532 22   


Q ss_pred             --hhHHHHHHHHhccHHHHHHHHHHHHHh
Q psy5930        2373 --ETLYALAYEQQGFYEQALKAYEVTIKK 2399 (2426)
Q Consensus      2373 --ET~~ALs~EQ~G~w~~AQ~~YE~a~~k 2399 (2426)
                        -.+.|.+|...|+|++|...|++|...
T Consensus        72 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~  100 (117)
T d1elwa_          72 KGYSRKAAALEFLNRFEEAKRTYEEGLKH  100 (117)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence              456788999999999999999999855


No 26 
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.04  E-value=1.8e+02  Score=32.75  Aligned_cols=61  Identities=18%  Similarity=0.267  Sum_probs=44.7

Q ss_pred             cchhHHHhHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccCCCCh---HHHHHHHHHhhcCCChhhhhHHHHHHHHHH
Q psy5930         678 LIKELRKDSLLYTVLVVRHYTLVAITQQTGPFPLYGKSALLEGTMDP---LVLIDAIAVILGHEDKELCKPGYIALKCIM  754 (2426)
Q Consensus       678 ~~~~l~~~a~~f~~~v~rhf~l~~i~~~~~~~~~~~~~~~~~~~ld~---~vl~DAi~~~l~~~~~~~~~~~~~~l~~~~  754 (2426)
                      .-||.|..-..++..++.|..-.-..                  +++   ..++|+++.++.|.++++.+.|..++..++
T Consensus       134 ~yPehR~~ff~LL~~i~~~cf~~ll~------------------lp~~qf~~vidsi~wa~kH~~~~V~~~gL~~l~~ll  195 (321)
T d1w9ca_         134 EYPEHRTNFFLLLQAVNSHCFPAFLA------------------IPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLL  195 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHCTTHHHH------------------SCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred             hChHHHHHHHHHHHHHHHHCHHHHHc------------------CCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence            45777777777777777774322111                  222   348999999999999999999999998776


Q ss_pred             HH
Q psy5930         755 ET  756 (2426)
Q Consensus       755 ~~  756 (2426)
                      +.
T Consensus       196 ~n  197 (321)
T d1w9ca_         196 QN  197 (321)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 27 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=35.85  E-value=42  Score=31.44  Aligned_cols=76  Identities=11%  Similarity=0.127  Sum_probs=53.5

Q ss_pred             CcHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhcCccHHHHHHHhhhc----Cc-
Q psy5930        2297 GLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSALREEDMWFGLWQKNA----KH- 2371 (2426)
Q Consensus      2297 naW~~ai~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DaL~eLY~~L~E~D~~~GlWrrra----~~- 2371 (2426)
                      +-+..|+..+++.+..                   +      +.....+-.|+.+|..+++.+--.-..++-.    .. 
T Consensus        30 g~~~~A~~~~~~al~~-------------------~------p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~   84 (112)
T d1hxia_          30 ANLAEAALAFEAVCQK-------------------E------PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI   84 (112)
T ss_dssp             TCHHHHHHHHHHHHHH-------------------S------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             hhhHHHHHHHhhhccc-------------------c------cccchhhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence            6799999999986651                   1      1123456679999999997766555444421    11 


Q ss_pred             -hhhHHHHHHHHhccHHHHHHHHHHHH
Q psy5930        2372 -KETLYALAYEQQGFYEQALKAYEVTI 2397 (2426)
Q Consensus      2372 -~ET~~ALs~EQ~G~w~~AQ~~YE~a~ 2397 (2426)
                       .-.+.|..|.+.|++++|.+.+++..
T Consensus        85 ~a~~~la~~y~~~g~~~~A~~~l~~~l  111 (112)
T d1hxia_          85 AVHAALAVSHTNEHNANAALASLRAWL  111 (112)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHCCCHHHHHHHHHHHh
Confidence             23556889999999999999998764


No 28 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.49  E-value=67  Score=32.21  Aligned_cols=86  Identities=7%  Similarity=0.071  Sum_probs=61.7

Q ss_pred             HHHHhhhc---CcHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhcCccHHHHHHH
Q psy5930        2289 MTYLGKAQ---GLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSALREEDMWFGLW 2365 (2426)
Q Consensus      2289 ikyLgkt~---naW~~ai~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DaL~eLY~~L~E~D~~~GlW 2365 (2426)
                      +|-.|..+   +-|-.|+...+..+.-                   +      +.....+-.++..|..+++.+-=.-..
T Consensus         7 l~~~Gn~~~~~g~~~~Ai~~~~kal~~-------------------~------p~~~~~~~~lg~~y~~~~~~~~Ai~~~   61 (201)
T d2c2la1           7 LKEQGNRLFVGRKYPEAAACYGRAITR-------------------N------PLVAVYYTNRALCYLKMQQPEQALADC   61 (201)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------C------SCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHh-------------------C------CCCHHHHHhHHHHHhhhhhhhhhhHHH
Confidence            44555554   6888999999886651                   1      112345667899999999888766666


Q ss_pred             hhhcCc-h-----hhHHHHHHHHhccHHHHHHHHHHHHHh
Q psy5930        2366 QKNAKH-K-----ETLYALAYEQQGFYEQALKAYEVTIKK 2399 (2426)
Q Consensus      2366 rrra~~-~-----ET~~ALs~EQ~G~w~~AQ~~YE~a~~k 2399 (2426)
                      ++--.. |     -.+.|..|.+.|.|++|...|++|+..
T Consensus        62 ~~al~l~p~~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l  101 (201)
T d2c2la1          62 RRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL  101 (201)
T ss_dssp             HHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            654222 2     345688999999999999999999865


No 29 
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.14  E-value=4.6e+02  Score=29.96  Aligned_cols=73  Identities=11%  Similarity=-0.000  Sum_probs=46.1

Q ss_pred             chHHHHHHHHHHhhhcCCchhh-----HHHHHHHHhhcCCCHHHHHHHHHHHHHHHccCCCChhhHHH-hhHHHHhhhcC
Q psy5930         997 VPLRKAAMRALASWHYVPNCSQ-----KIFNTLFAALERPNPELQEAAFQAMKTFVNGSPIDLKSVYE-VMKPLLLTLGD 1070 (2426)
Q Consensus       997 v~LRv~ci~lL~~~~~~~~~~~-----rIi~vfFKsL~s~s~ei~~aA~~gLk~vL~~~~~~~e~L~q-~LRPiL~nLsD 1070 (2426)
                      -.++..|..+|..+-..++.+.     ..+..|.+-|++.+++++..|-.+|.... ..+-..+.+.+ +--|.|++|-.
T Consensus       433 ~~~~~~~~~al~~la~~~~~r~~~~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~-~~~~~~~~i~~~g~~~~L~~Ll~  511 (529)
T d1jdha_         433 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGATAPLTELLH  511 (529)
T ss_dssp             HHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHT-TSHHHHHHHHHTTCHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHHh-cChhhHHHHHHCCCHHHHHHHhC
Confidence            3566777777766555554443     35667999999999999999999998753 33323344444 33344444433


No 30 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.30  E-value=5.9e+02  Score=30.58  Aligned_cols=57  Identities=11%  Similarity=0.100  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHhcCChhHHHHhhHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhcCCC
Q psy5930        1778 IALELLTLLITILDEGQILHIIKPLQRGLVACISSSITKVIRLVHALLCRLMSTFPT 1834 (2426)
Q Consensus      1778 naLevL~il~~~~~~~~il~nl~~lq~lL~kcl~~~n~~i~~~l~~ll~rll~~~p~ 1834 (2426)
                      .++..+..+........+...+..+-..+.+.+..+++.+..+....++++.+.+|.
T Consensus       385 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~  441 (876)
T d1qgra_         385 AAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPE  441 (876)
T ss_dssp             HHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHcch
Confidence            344445555555555666666777777777888888899988888888888887763


No 31 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.62  E-value=83  Score=39.91  Aligned_cols=166  Identities=11%  Similarity=0.153  Sum_probs=87.5

Q ss_pred             ChhhHHHHHHHHHHHHhhhcCCCCccchhHH-------HHHHHHHhhhcccCCCCCcccccchHHHHHHHHHHHHHhhcC
Q psy5930         331 TSPVFATVLVEYLLEHMEEMGNGNVERSNLC-------LKLFKLVFGSVSFYPAENEHMLRPHLHQIVNRSMELAMTAKE  403 (2426)
Q Consensus       331 ~s~~F~~ill~fL~~~l~~lg~~~~~~~~~~-------lrLfkl~F~sv~~~~~~nE~vl~phl~~ii~~~~~~a~~a~e  403 (2426)
                      ..+.+..-+++++++.|.+      ....+.       -+++............-+...+.||+..++..-+........
T Consensus       489 ~~~~~~~~~~~~l~~~L~~------~~~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~~l~~~~~  562 (959)
T d1wa5c_         489 LTKAQLIELMPILATFLQT------DEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGS  562 (959)
T ss_dssp             SCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCC
T ss_pred             ccHHHHHHHHHHHHHHhCC------CchhHHHHHHHHHHHHHHhhcccccchhhccHHHHHhhHHHHHHHHHHHHHhhcc
Confidence            3345556678888877731      111111       122222222222222344568999999999999988877765


Q ss_pred             chhHH----HHHHHHHHhhcCCchhhHhhhHHHHHHHHHHHHHHhh----hcCccchhhhHHhhhhhccccc---ccccc
Q psy5930         404 PYNYF----LLLRALFRSIGGGSHDLLYQEFLPLLRNLLQGLNSLQ----SGLHKQQMKDLFVELCLTVPVR---LSSLL  472 (2426)
Q Consensus       404 p~~Y~----~LLR~lFRSiggg~fe~LYkeilPLLp~lLe~Ln~Ll----~~~~~~~~RdL~VELCLTVPvR---LS~LL  472 (2426)
                      .....    +++.++-+-|.     .+..++.|..+.+++.|..++    ....++....-..|. ++.=++   =....
T Consensus       563 ~~~~~~~~~~ll~~l~~ii~-----~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~e~-l~~l~~~~~~~~~~  636 (959)
T d1wa5c_         563 SPEKLAENEFLMRSIFRVLQ-----TSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFES-IGAILNYTQRQNLP  636 (959)
T ss_dssp             CHHHHTSCHHHHHHHHHHHH-----HHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHH-HHHHHHTSCGGGHH
T ss_pred             hhhhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHH-HHHHHHhcCchhHH
Confidence            54433    35666655443     122333444444444443333    333333332222221 111111   12234


Q ss_pred             CCcchhhHHHHHHhcC-CchhHHhhhhhhhhhhccCC
Q psy5930         473 PYLPMLMDPLVSALNG-SSTLISQGLRTLELCVDNLQ  508 (2426)
Q Consensus       473 PyL~~LM~PLV~AL~~-~~eLvsqGLRTLElcVDNLt  508 (2426)
                      ++.+.+|+.+...++. ..++...++..++.|+.+..
T Consensus       637 ~l~~~l~p~i~~~~~~~~~~~~~~~~~l~~~~~~~~~  673 (959)
T d1wa5c_         637 LLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQSA  673 (959)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhCC
Confidence            4567778877777755 55677888888888887764


No 32 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.27  E-value=59  Score=33.47  Aligned_cols=56  Identities=16%  Similarity=0.166  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHhcCccHHHHHHHhhh----cC--chhhHHHHHHHHhccHHHHHHHHHHHHHh
Q psy5930        2344 IIDQLAEMYSALREEDMWFGLWQKN----AK--HKETLYALAYEQQGFYEQALKAYEVTIKK 2399 (2426)
Q Consensus      2344 ~~DaL~eLY~~L~E~D~~~GlWrrr----a~--~~ET~~ALs~EQ~G~w~~AQ~~YE~a~~k 2399 (2426)
                      .+-.|+.+|..+++.|--.-..++-    -.  ..-++.|..|.+.|.+++|.+.|++|...
T Consensus        38 ~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~   99 (192)
T d1hh8a_          38 ICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQ   99 (192)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence            4556999999999887665555432    12  22577899999999999999999999764


No 33 
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.25  E-value=34  Score=38.52  Aligned_cols=68  Identities=21%  Similarity=0.271  Sum_probs=0.0

Q ss_pred             chhhHHHHHHh-cCCchhHHhhhhhh-hhhhccCCcchhhhccchHHHHHHHH-----HHhhcCCCCchhhHHHHHHhhc
Q psy5930         476 PMLMDPLVSAL-NGSSTLISQGLRTL-ELCVDNLQPDFLYDHIQPVRADLMQA-----LWRSLRSPNEQVAHVAYRVLGK  548 (2426)
Q Consensus       476 ~~LM~PLV~AL-~~~~eLvsqGLRTL-ElcVDNLtpdfLdp~~~pV~~elm~A-----Lw~~Lkp~~~~~~~~a~RILGK  548 (2426)
                      +.+|++||.-| ++++++-..|.++| .+|.+|          ...+..+.++     |.++|+..+...-..|.+.||+
T Consensus         1 ~~~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~----------~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~   70 (457)
T d1xm9a1           1 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQD----------ESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRN   70 (457)
T ss_dssp             CCCHHHHHHHHHSSCTHHHHHHHHHHHHHTSSC----------SSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC----------HHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHH


Q ss_pred             cCCCc
Q psy5930         549 FGGGN  553 (2426)
Q Consensus       549 LGGrN  553 (2426)
                      |--.|
T Consensus        71 L~~~~   75 (457)
T d1xm9a1          71 LVFRS   75 (457)
T ss_dssp             HHSSC
T ss_pred             HHcCC


No 34 
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.19  E-value=1.4e+02  Score=31.94  Aligned_cols=90  Identities=9%  Similarity=0.125  Sum_probs=61.5

Q ss_pred             ChHHHHHHhh---hcCcHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhcCccHHH
Q psy5930        2285 KPAIMTYLGK---AQGLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSALREEDMW 2361 (2426)
Q Consensus      2285 PP~LikyLgk---t~naW~~ai~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DaL~eLY~~L~E~D~~ 2361 (2426)
                      .+.+...+|.   .-+-|..|+..++.....                   +      +.....+-.|+.+|..+++.|--
T Consensus       171 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-------------------~------p~~~~~~~~lg~~~~~~g~~~~A  225 (323)
T d1fcha_         171 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV-------------------R------PNDYLLWNKLGATLANGNQSEEA  225 (323)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------C------TTCHHHHHHHHHHHHHTTCHHHH
T ss_pred             ccccchhhHHHHHHHHHHhhhhccccccccc-------------------c------cccccchhhhhhcccccccchhH
Confidence            3444444443   346788999999886541                   0      11123566789999999988766


Q ss_pred             HHHHhhhc----Cchh--hHHHHHHHHhccHHHHHHHHHHHHHh
Q psy5930        2362 FGLWQKNA----KHKE--TLYALAYEQQGFYEQALKAYEVTIKK 2399 (2426)
Q Consensus      2362 ~GlWrrra----~~~E--T~~ALs~EQ~G~w~~AQ~~YE~a~~k 2399 (2426)
                      .-.+++-.    .+++  -+.|..|.+.|.+++|.+.|++|..-
T Consensus       226 ~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l  269 (323)
T d1fcha_         226 VAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNM  269 (323)
T ss_dssp             HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            66665432    3333  34688999999999999999999874


No 35 
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.78  E-value=1.1e+02  Score=33.19  Aligned_cols=78  Identities=21%  Similarity=0.223  Sum_probs=57.5

Q ss_pred             CcHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhcCccHHHHHHHhhh-cCchh--
Q psy5930        2297 GLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSALREEDMWFGLWQKN-AKHKE-- 2373 (2426)
Q Consensus      2297 naW~~ai~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DaL~eLY~~L~E~D~~~GlWrrr-a~~~E-- 2373 (2426)
                      +-|..|+..++.....                         .+.....+..++.+|..+++.|--...+++- ...|+  
T Consensus       285 ~~~~~A~~~~~~~~~~-------------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~  339 (388)
T d1w3ba_         285 GSVAEAEDCYNTALRL-------------------------CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA  339 (388)
T ss_dssp             SCHHHHHHHHHHHHHH-------------------------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCH
T ss_pred             CCHHHHHHHHHhhhcc-------------------------CCccchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence            6788888888875541                         0112345678999999999988887877764 23332  


Q ss_pred             ---hHHHHHHHHhccHHHHHHHHHHHHHh
Q psy5930        2374 ---TLYALAYEQQGFYEQALKAYEVTIKK 2399 (2426)
Q Consensus      2374 ---T~~ALs~EQ~G~w~~AQ~~YE~a~~k 2399 (2426)
                         .+.|..|.+.|.|++|.+.|++|...
T Consensus       340 ~~~~~la~~~~~~g~~~~A~~~~~~al~l  368 (388)
T d1w3ba_         340 AAHSNLASVLQQQGKLQEALMHYKEAIRI  368 (388)
T ss_dssp             HHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence               34588999999999999999998754


Done!